Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168003.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41719

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
612--643
7
4.6
7
92
0
55
15
37
0
46
1.46
1022--1049
14
2.0
14
100
0
56
0
7
7
85
0.73
4346--4381
4
9.2
4
90
6
56
80
19
0
0
0.71
7739--7782
15
2.9
16
76
13
56
25
2
0
72
0.96
10356--10479
63
2.0
63
91
0
203
36
16
8
39
1.78
11612--11651
21
1.9
21
84
0
53
55
15
7
22
1.65
12083--12120
18
2.1
18
95
0
67
52
7
10
28
1.64
14690--14715
2
13.0
2
100
0
52
50
0
0
50
1.00
19856--19880
8
3.1
8
100
0
50
28
12
0
60
1.32
21669--21718
20
2.4
22
87
9
70
20
8
16
56
1.65
29193--29225
13
2.5
13
95
0
57
21
0
6
72
1.05
29550--29582
14
2.4
14
94
0
57
27
18
9
45
1.79
38416--38484
16
4.1
16
70
17
59
53
0
2
43
1.15
38436--38487
15
3.3
15
83
5
59
48
0
3
48
1.20
38489--38722
21
11.4
21
68
15
64
45
1
1
51
1.17
38535--38760
24
9.7
22
67
18
84
45
1
1
52
1.17
38480--38594
41
2.8
40
73
11
106
50
1
1
46
1.22
38572--38723
31
4.8
32
69
19
104
42
0
1
55
1.12
38569--38716
43
3.7
39
72
19
119
41
0
1
56
1.12
38666--38750
14
5.8
14
73
20
75
47
1
0
51
1.08
38596--38722
9
14.2
9
67
24
58
42
0
0
55
1.10
38598--38692
36
2.7
35
82
11
120
43
1
1
54
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39324--39472
15
9.5
15
71
15
97
45
0
1
52
1.14
39329--39440
11
11.2
10
70
18
56
44
0
0
54
1.06
39327--39399
37
2.0
37
83
0
92
43
0
1
54
1.08
39335--39468
46
2.9
44
79
9
135
45
0
1
52
1.15
39417--39487
19
3.7
19
78
14
74
49
1
1
47
1.18
39396--39487
47
2.0
45
81
14
107
48
1
1
48
1.15
39420--39500
37
2.1
39
82
8
96
54
1
1
43
1.16
39448--39506
18
3.2
18
85
4
55
57
1
1
38
1.19
39826--39895
19
3.7
19
81
7
88
34
17
17
31
1.93
41419--41466
3
16.3
3
91
4
80
68
0
0
31
0.90

Tables:   1

The End!