Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168005.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41643

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--680
12
4.1
12
75
5
53
45
0
2
52
1.12
1122--1322
109
1.8
109
79
4
235
39
15
15
28
1.88
3704--3743
15
2.7
15
84
0
53
70
7
0
22
1.12
4376--4616
129
1.9
129
90
1
385
34
9
5
50
1.58
4707--4771
9
7.2
8
79
16
58
78
1
1
18
0.91
4707--4765
8
6.6
9
81
14
61
77
1
1
18
0.93
4707--4783
19
4.3
16
75
21
57
76
1
2
19
0.97
4737--4783
17
2.9
16
79
14
53
76
2
2
19
0.99
5246--5286
20
2.1
19
86
9
55
41
14
14
29
1.86
5859--5892
16
2.1
17
88
5
52
23
11
35
29
1.90
6407--6439
16
2.1
17
88
11
52
18
15
6
60
1.54
6584--6617
15
2.3
15
89
0
50
26
14
2
55
1.53
7727--7757
16
1.9
16
93
0
53
38
16
0
45
1.47
19413--19457
23
2.0
22
84
16
58
40
22
6
31
1.80
21601--21633
10
3.3
10
91
8
50
42
0
3
54
1.15
21658--21697
22
1.9
20
85
10
53
42
7
0
50
1.30
21758--21806
21
2.3
21
85
0
62
42
8
0
48
1.32
29022--29047
12
2.2
12
100
0
52
38
0
0
61
0.96
30380--30434
10
5.5
10
76
8
58
29
7
18
45
1.76
30351--30438
30
3.0
29
86
6
115
28
12
15
43
1.84
36310--36355
25
1.9
24
82
8
58
19
21
8
50
1.75
37500--37561
17
3.8
17
76
14
60
29
9
3
58
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38887--39023
69
2.0
67
84
5
177
39
4
16
40
1.68
40584--40620
14
2.4
16
86
8
51
51
0
5
43
1.24
41419--41448
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!