Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168008.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_263, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41214

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2976--3013
20
1.9
20
88
0
58
28
5
0
65
1.14
3043--3088
23
2.0
23
82
0
56
39
0
8
52
1.33
9079--9140
25
2.5
24
89
5
88
20
32
16
30
1.95
15998--16144
73
2.0
73
95
0
267
20
23
12
42
1.87
16066--16425
180
2.0
180
97
0
675
20
22
23
33
1.97
24209--24250
22
1.9
22
95
0
75
30
11
14
42
1.81
30151--30193
22
2.0
22
86
4
61
39
0
0
60
0.97
30614--30646
14
2.4
14
94
0
57
45
9
0
45
1.35
40820--40848
14
2.0
15
93
6
51
41
6
0
51
1.28
40881--40939
26
2.3
26
88
5
86
52
3
0
44
1.17

Tables:   1

The End!