Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168014.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_269, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 40958
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Found at i:59 original size:19 final size:19
Alignment explanation
Indices: 32--69 Score: 58
Period size: 19 Copynumber: 2.0 Consensus size: 19
22 CCAGATTTCG
32 GTTGAATTTTTCGACGAAA
1 GTTGAATTTTTCGACGAAA
* *
51 GTTGCATTTTTCGATGAAA
1 GTTGAATTTTTCGACGAAA
70 ATTTCGGCCA
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
19 17 1.00
ACGTcount: A:0.29, C:0.11, G:0.21, T:0.39
Consensus pattern (19 bp):
GTTGAATTTTTCGACGAAA
Found at i:601 original size:5 final size:5
Alignment explanation
Indices: 591--692 Score: 80
Period size: 5 Copynumber: 21.6 Consensus size: 5
581 CCTTTTTACC
*
591 TTTAT TTTA- TTT-T TTTAT TTTAT TTTA- -TTAT TTTATT TTTGT TTTACT
1 TTTAT TTTAT TTTAT TTTAT TTTAT TTTAT TTTAT TTTA-T TTTAT TTTA-T
*
639 TTT-C TTTAT TTTA- TTT-T TTTAT TTTCACT TTTAT TTT-T TTTA- -TTAT
1 TTTAT TTTAT TTTAT TTTAT TTTAT TTT-A-T TTTAT TTTAT TTTAT TTTAT
685 TTTAT TTT
1 TTTAT TTT
693 CTTTAAATAA
Statistics
Matches: 79, Mismatches: 4, Indels: 28
0.71 0.04 0.25
Matches are distributed among these distances:
3 6 0.08
4 19 0.24
5 40 0.51
6 10 0.13
7 4 0.05
ACGTcount: A:0.16, C:0.04, G:0.01, T:0.79
Consensus pattern (5 bp):
TTTAT
Found at i:609 original size:13 final size:13
Alignment explanation
Indices: 591--692 Score: 109
Period size: 13 Copynumber: 7.6 Consensus size: 13
581 CCTTTTTACC
591 TTTATTTTATTTT
1 TTTATTTTATTTT
604 TTTATTTTATTTT
1 TTTATTTTATTTT
*
617 ATTATTTTA--TT
1 TTTATTTTATTTT
*
628 TTTGTTTTACTTTT
1 TTTATTTTA-TTTT
642 CTTTATTTTATTTT
1 -TTTATTTTATTTT
656 TTTATTTTCACTTTT
1 TTTATTTT-A-TTTT
* *
671 ATTTTTTTTATTAT
1 -TTTATTTTATTTT
685 TTTATTTT
1 TTTATTTT
693 CTTTAAATAA
Statistics
Matches: 75, Mismatches: 7, Indels: 14
0.78 0.07 0.15
Matches are distributed among these distances:
11 9 0.12
13 36 0.48
14 10 0.13
15 13 0.17
16 7 0.09
ACGTcount: A:0.16, C:0.04, G:0.01, T:0.79
Consensus pattern (13 bp):
TTTATTTTATTTT
Found at i:635 original size:29 final size:28
Alignment explanation
Indices: 592--692 Score: 77
Period size: 29 Copynumber: 3.6 Consensus size: 28
582 CTTTTTACCT
592 TTATTTTA--TTTTTTTATTTTATTTTA
1 TTATTTTATTTTTTTTTATTTTATTTTA
* *
618 TTATTTTATTTTTGTTTTACTTTTCTTTATT
1 TTATTTTATTTTT-TTTTA-TTTTATTT-TA
* *
649 TTATTTT-TTTATTTTCACTTTTATTTT-
1 TTATTTTATTTTTTTTTA-TTTTATTTTA
*
676 TT-TTATTATTTTATTTT
1 TTATT-TTATTTTTTTTT
693 CTTTAAATAA
Statistics
Matches: 60, Mismatches: 8, Indels: 12
0.75 0.10 0.15
Matches are distributed among these distances:
26 10 0.17
27 4 0.07
28 10 0.17
29 17 0.28
30 11 0.18
31 8 0.13
ACGTcount: A:0.16, C:0.04, G:0.01, T:0.79
Consensus pattern (28 bp):
TTATTTTATTTTTTTTTATTTTATTTTA
Found at i:655 original size:52 final size:51
Alignment explanation
Indices: 590--697 Score: 157
Period size: 52 Copynumber: 2.1 Consensus size: 51
580 TCCTTTTTAC
* *
590 CTTTATTTTATTTTTTTATTTT-A-TTTTATTATTTTATTTTTGTTTTACTTTT
1 CTTTATTTTATTTTTTTATTTTCACTTTTATT-TTTT-TTATTATTTTA-TTTT
642 CTTTATTTTATTTTTTTATTTTCACTTTTATTTTTTTTATTATTTTATTTT
1 CTTTATTTTATTTTTTTATTTTCACTTTTATTTTTTTTATTATTTTATTTT
693 CTTTA
1 CTTTA
698 AATAAAAATA
Statistics
Matches: 52, Mismatches: 2, Indels: 5
0.88 0.03 0.08
Matches are distributed among these distances:
51 9 0.17
52 31 0.60
53 5 0.10
54 7 0.13
ACGTcount: A:0.16, C:0.06, G:0.01, T:0.78
Consensus pattern (51 bp):
CTTTATTTTATTTTTTTATTTTCACTTTTATTTTTTTTATTATTTTATTTT
Found at i:681 original size:34 final size:32
Alignment explanation
Indices: 591--692 Score: 109
Period size: 34 Copynumber: 3.1 Consensus size: 32
581 CCTTTTTACC
*
591 TTTATTTTATTTT-TTTATTTTATTTTATTAT
1 TTTATTTTATTTTATTTTTTTTATTTTATTAT
* * *
622 TTTATTTTTGTTTTACTTTTCTTTATTTTATTTT
1 TTTA-TTTTATTTTA-TTTTTTTTATTTTATTAT
656 TTTATTTTCACTTTTATTTTTTTTATTATT-TTAT
1 TTTATTTT-A-TTTTATTTTTTTTATT-TTATTAT
690 TTT
1 TTT
693 CTTTAAATAA
Statistics
Matches: 58, Mismatches: 7, Indels: 9
0.78 0.09 0.12
Matches are distributed among these distances:
31 4 0.07
32 8 0.14
33 4 0.07
34 35 0.60
35 7 0.12
ACGTcount: A:0.16, C:0.04, G:0.01, T:0.79
Consensus pattern (32 bp):
TTTATTTTATTTTATTTTTTTTATTTTATTAT
Found at i:693 original size:29 final size:29
Alignment explanation
Indices: 608--693 Score: 95
Period size: 29 Copynumber: 2.9 Consensus size: 29
598 TATTTTTTTA
*
608 TTTTATTTTATTATT-TTATTTT-TGTTTTAC
1 TTTTATTTT-TT-TTATTATTTTAT-TTTCAC
* * *
638 TTTTCTTTATTTTATTTTTTTATTTTCAC
1 TTTTATTTTTTTTATTATTTTATTTTCAC
667 TTTTATTTTTTTTATTATTTTATTTTC
1 TTTTATTTTTTTTATTATTTTATTTTC
694 TTTAAATAAA
Statistics
Matches: 47, Mismatches: 7, Indels: 5
0.80 0.12 0.08
Matches are distributed among these distances:
28 2 0.04
29 37 0.79
30 8 0.17
ACGTcount: A:0.15, C:0.06, G:0.01, T:0.78
Consensus pattern (29 bp):
TTTTATTTTTTTTATTATTTTATTTTCAC
Found at i:829 original size:59 final size:59
Alignment explanation
Indices: 707--1173 Score: 516
Period size: 59 Copynumber: 7.8 Consensus size: 59
697 AAATAAAAAT
* * *
707 AAAAAAAAAATTTT-GGGAAAAGTTGAAAGTATCAATTTTCCTT-AAAA-ATAATTTCC
1 AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAATAAAATTTCC
* * *
763 AAAAAAAAAACATTTTTGGGGAAAAGTTGAAAGTATCAATTTTGCTTGAAAATAAAGTTTCC
1 ---AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAATAAAATTTCC
* *
825 AAAAAAAATATATATTTTTGGGGAAAAGTTGAAAGTTTCAATTTTCCTTAAAAAATAAAATTT-C
1 ---AAAAA-A-ATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTT-GAAAATAAAATTTCC
** * ** * *
889 AAAAAAAGGGTTTTTGAGG-AAAGTTGAAAGTATCAATCCTCCTTGAAAATCAAAGTTTCT
1 AAAAAAA-TATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAAT-AAAATTTCC
* * *
949 AAAAAAAAATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAAATTTCA
1 AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAATAAAATTTCC
** * * * *
1008 AAAAAAAGGTTTTTGAGAAAAAGTTGAAAGTATCAATTTTCCTTGAAAATCAAAGTTTTC
1 AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAAT-AAAATTTCC
*
1068 --AAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAATCAAAATTTCC
1 AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAAT-AAAATTTCC
1126 AAAAAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTG
1 ---AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTG
1174 CGCAAGAACA
Statistics
Matches: 351, Mismatches: 41, Indels: 28
0.84 0.10 0.07
Matches are distributed among these distances:
58 58 0.17
59 101 0.29
60 78 0.22
61 9 0.03
62 15 0.04
63 43 0.12
64 36 0.10
65 11 0.03
ACGTcount: A:0.45, C:0.08, G:0.14, T:0.33
Consensus pattern (59 bp):
AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAATAAAATTTCC
Found at i:2828 original size:26 final size:26
Alignment explanation
Indices: 2792--2844 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
2782 CCGATCCGAT
*
2792 CTTAGACTGGGAATGAATTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
*
2818 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTACGTATG
2844 C
1 C
2845 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:3717 original size:26 final size:26
Alignment explanation
Indices: 3688--3740 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
3678 CCGATCCGAT
3688 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
3714 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
3740 C
1 C
3741 CCAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:3999 original size:896 final size:897
Alignment explanation
Indices: 1930--6604 Score: 6053
Period size: 896 Copynumber: 5.2 Consensus size: 897
1920 CCGGTCTGAT
* * *
1930 CTTAGATTGGGAATGAACTCCGTATGACTAAGTCAACCCACGAAACGAGCGTGCGAGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGC
* * *
1995 CGGCCAGAGGGGCAGGATGCACAAGCCGAGGATCGGCCCGGTCCCCCTTAGC---CT---G---C
66 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTTAGCGTGCTGCCGATCC
* * * *
2051 TGCT---GCAACCCTCAGTCCGGTCCGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCAGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
2113 CCGACGAAACGAGCGGGCGGGCCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCA
196 CCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
2178 TAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAATGCCATTT
* *
2243 TTATGGATTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
2308 TCGTTTTCTATTTTTCATGATTTTAT-AAACTTTTTACGGTTCGTATTTTTTTAAAATTTTTTCA
391 TCGTTTTCTATTTTTCATGATTTT-TGAAACTTTTTACGTTTGGGATTTTTTTAAAATTTTTTCA
* * *
2372 GAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGAATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
* * *
2437 ATGCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGATCATTCGAAAAAAGTGTCCCCATTTTAG
520 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAG
*
2502 ACACTTTAATGGCTTCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTT
*
2567 CTTGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 C-TGAGGTTT-ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * **
2632 TGTGCGCACACCCCCCGACACCCGCAATTGTCGGAA-CCCATTATCGCCGGTCAGGTTCTAT-GG
712 TGTGCGCACACCCCCCGAC-CCCCCAATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCT-TCGG
* * * *
2695 CGATGCTCCGACGATGGTGGCCCGAGCGAAAAAAAATGCGGCAGCAGCACATGCCCGAGCCCAGC
775 CGATGCTCCGGCGATGGTGCCCCGAGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * *
2760 ATGTGCACTCGTAACCCTTGATCCGATCCGATCTTAGACTGGGAATGAATTACGTATG
840 ATGTGCACCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
2818 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGTGTGCGGGTGCTCTGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGC
* * * * *
2883 CAGCCAGAGGGGTAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTCAGCATGCTGTCGATCC
66 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTTAGCGTGCTGCCGATCC
* * * *
2948 TGCTACCACAACTCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAAGCCAA
131 TGCTACCACAACCCTCAGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
3013 CTGACGAAACGAGCGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGGCAGGACGCGCAAGCCA
196 CCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
3078 TGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCCTCATATTTCTTCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAATGCCATTT
3143 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
3208 TCATTTTTTATTTTTCATGATTTTTGAAACTTTTTACTGTTTGGGA-TTTTTTAAAATTTTTTCA
391 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAC-GTTTGGGATTTTTTTAAAATTTTTTCA
* ** * * * *
3272 GATGGAGTTTTGGTGCCAAACTTGGTAGACATGATCCTTGTATTTTTATGGGCATGCACAAAACA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
* *
3337 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAG
3402 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTC
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTC
* * *
3467 ATGA-GATT-TGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACC-GACAACCATCGCACATCAT
650 -TGAGGTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG-CACCCATCGCACATCAT
* * * *
3529 GTGCGCACACCCCCTGACCCCTCCAATCGTCGAAAACCCAATGCCGTCGGTCAGGTTCTTCGACG
713 GTGCGCACACCCCCCGACCCC-CCAATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTTCGGCG
* * * * * *
3594 ATGCTCCGGTGATGCTG-CCCGGGCAAAAAAAAATGTGGCACGAGCACATGCCCGAGCCTAGCAT
777 ATGCTCCGGCGATGGTGCCCCGAGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
*
3658 GTGCACCCGCAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
842 GTGCACCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
3714 CTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGC
* * * * * * *
3779 CGGCCAAAGGGGCAGGATGCGCATGCCAGGGATCGATCGGGTCCCCCTTAGCGTGCTGTCAATCC
66 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTTAGCGTGCTGCCGATCC
* * *
3844 TGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCAGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
* * * * **
3909 CCGATGAAACGAACTGGCGGGCGGGCTGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGGTG
196 CCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
3974 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTT-TTGCCATGCCAATGCCATT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTT-CCATGCCAATGCCATT
*
4038 TTTATGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
** * ***
4103 CTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCAAACTTTTTTT-AAATTTTTTC
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTTGGGA-TTTTTTTAAAATTTTTTC
** *
4167 AGAAGGAGTTTTGGGGCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTGGGCATGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
* * * *
4232 AATTCAGCTAAAAAATCGAAGTGTATAGGATTTTGTGACAATTTGAAAAAAATGTCCCCATTTTA
519 AATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTA
* * *
4297 GACACTTTAATTGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCCTTAAGGGGTGTGAGTT
584 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTT
4362 CTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 C-TGAGGTTT-ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
**
4427 TGTGCGCACACCCCAACCCCCCTCGTGCCCCCAATCGTC-AGAACCCCAATGCCGCCGGTCAGGT
712 TGTGCG--CA---C-A-CCCCC-CGACCCCCCAATCGTCGA-AACCCCAATGCCGCCGGTCAGGT
* * * * * *
4491 TC-TCTGACGATCCTCCGGCGATGGAGCCCCGGGCAAAAAAAAATGCGGCACCAGTACATGCCCA
768 TCTTC-GGCGATGCTCCGGCGATGGTGCCCCGAGCAAAAAAAAATGCGGCACCAGCACATGCCCG
* ** * * * *
4555 AGCCCAGCATGGGTGCCCGTAACCCTCGATCCGGTCTGATCTTAGATTGGGAATGAACTTCGTAT
832 AGCCCAGCATGTGCACCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
4620 G
897 G
* * * * * * *
4621 CTTAAACTGAGAATGAACTCCATATGCCTAAGTCAACCTATGAAACGAGCATGC-AGCGCACAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGC
* * * * ** * * *
4685 CGGCCAGACGTGCAGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCTCAGCATGCTGCCAATCC
66 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTTAGCGTGCTGCCGATCC
* ** * * *
4750 TACTACTGCAACCCTCGGTTCGGTCCAATCTTAGACT-GTGAATGAACTCCGTATGCCTAAGCCA
131 TGCTACCACAACCCTCAGTCCGGTCCGATCTTAGACTAG-GAATGAACTCCGTATGCCTAAGCCA
* * * * * *
4814 GCCGACGAAAC-AAGCGGGCGGGCGGGCGGTCACTATGTCGGCCAGAGAGACGGGATGCGCAGGC
195 ACCGACGAAACGAA-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * * **
4878 CGTGGAT-TACTAGGGTGGTAGGTGGGTTTTGGCACATATTCATATTT-TTGCTGTGCCAATGCC
259 CGTGGATCGA-TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTT-CCATGCCAATGCC
*
4941 ATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
322 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
*
5006 CGACTCGTTTTCTATTTTTCATGATTTTCT-AAACTTTTTACGGTTTGGGATTTTTTTTTAAATT
387 CGACTCGTTTTCTATTTTTCATGATTTT-TGAAACTTTTTAC-GTTTGGGA-TTTTTTTAAAATT
* *
5070 TTTTCAGAAGGAATTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCAC
449 TTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC
* *
5135 GAAAAAATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
514 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * * *
5200 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATGCTCTTCATTGGGGTG
579 TTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA-AGGGGTG
* *
5265 TGAGTTCTCAAGGTTTGATGAGGGAGAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
643 TGAGTTCT-GAGGTTT-ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
** * *
5330 ACATCATGTGCGCACACCCCCCCTCCCCACCAATCGAC-AGAACCCCAATGCCGTCGGTCAGGTT
706 ACATCATGTGCGCACACCCCCCGACCCC-CCAATCGTCGA-AACCCCAATGCCGCCGGTCAGGTT
* * ** * * * *
5394 CTTCGGTGATGTTCTAGAGATGGTGCCCCAAGCGAAAAAAAATGCGGCACCAGCACATGCTCGAG
769 CTTCGGCGATGCTCCGGCGATGGTGCCCCGAGCAAAAAAAAATGCGGCACCAGCACATGCCCGAG
* * * * *
5459 CCCAGCATGTGCACCTGCAACCCTCGGTCCGGTCAGATCTTACACTGGGAATGAACTCCATATG
834 CCCAGCATGTGCACCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * * * *
5523 CTTAGACTGGAAATGAACACCGTATGCCTAAGTCAATCCACGAAATGAGTGTACGGGCACTGAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGC
* * * * * * * *
5588 CGGCCAGAGGGGCTGGATACGCAAGCCGGGGATCAATCGGGTCCCCTCCTA-TGTGCTACCGATC
66 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCC-CTTAGCGTGCTGCCGATC
* * * * * * *
5652 CTACTACTACAACCCTCAGTCCGGTTCAATCTTAGAC-AGGGAATGAAGTCTGTATGCCTTAGCC
130 CTGCTACCACAACCCTCAGTCCGGTCCGATCTTAGACTA-GGAATGAACTCCGTATGCCTAAGCC
* * * *
5716 AACTGACGAAACG-A---GCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCAGGATGCACAAGC
194 AACCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
*
5777 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAATGCCAT
* * *
5842 TTTTATGGCTTTTAAATTTATAGAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * * *
5907 ACTCGTTTTCTATTTTTCACGATTTGTGAAACTTTTTACGGTTCGAGATTTTTTTAAAACTTTTT
389 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAC-GTTTGGGATTTTTTTAAAATTTTTT
* * * * *
5972 CAGAAGGAGATTTGGCCCCACACCTGGTAGACATGATCCTTGTATTTTTTTTGACATGCACAAAA
453 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* *
6037 AAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACAATTTGAAAAAAATGTCCCCATTTT
518 AAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
6102 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGCGGGTGTGAG
583 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAG
* * * *
6167 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACTAGCACCTATCGCACAT
647 TTCT-GAGGTTT-ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *** * * * *
6232 CATGTGCGCACACCCCCTGTTGCCCCAATCGTCGGAACCCCAACGCCACCGGTCAGGTTCTCCGG
710 CATGTGCGCACACCCCCCGACCCCCCAATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTTCGG
* * * ** *
6297 TGATGCTTCGGCGATGGTGCCCCGAGCAAAAAAAAA-GTGGCACCAGCACATGCTTGAGCCAAGC
775 CGATGCTCCGGCGATGGTGCCCCGAGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * * *
6361 ATGTGCACCCACAACCGTTGGTTCGGTCCGATCTTACACTGGGAATGAACTCTGTATG
840 ATGTGCACCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
6419 CTTAGACTGGGAATGAACTCTGTATGCCTACGTTAACCCACGAAACGAGTGTGCGAGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGC
* ** * * * *
6484 CGACCAGAGGGGCAGGATGCACAAGTTGGGGATCGACCGGGTCCCCTCCTA-TGTGCTACTGATC
66 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCC-CTTAGCGTGCTGCCGATC
** * * *
6548 CTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCTGTATGC
130 CTGCTACCACAACCCTCAGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGC
6605 TTAGACTGGG
Statistics
Matches: 3331, Mismatches: 399, Indels: 106
0.87 0.10 0.03
Matches are distributed among these distances:
888 104 0.03
891 2 0.00
894 1 0.00
895 10 0.00
896 975 0.29
897 115 0.03
898 278 0.08
899 269 0.08
900 456 0.14
901 12 0.00
902 181 0.05
903 122 0.04
904 5 0.00
905 8 0.00
906 382 0.11
907 156 0.05
908 176 0.05
909 79 0.02
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (897 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGC
CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTTAGCGTGCTGCCGATCC
TGCTACCACAACCCTCAGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTTGGGATTTTTTTAAAATTTTTTCAG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCT
GAGGTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
CGCACACCCCCCGACCCCCCAATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTTCGGCGATGC
TCCGGCGATGGTGCCCCGAGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
ACCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:5537 original size:26 final size:26
Alignment explanation
Indices: 5497--5549 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
5487 CCGGTCAGAT
* *
5497 CTTACACTGGGAATGAACTCCATATG
1 CTTACACTGGAAATGAACACCATATG
* *
5523 CTTAGACTGGAAATGAACACCGTATG
1 CTTACACTGGAAATGAACACCATATG
5549 C
1 C
5550 CTAAGTCAAT
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.23, G:0.21, T:0.25
Consensus pattern (26 bp):
CTTACACTGGAAATGAACACCATATG
Found at i:6429 original size:26 final size:26
Alignment explanation
Indices: 6393--6445 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6383 TCGGTCCGAT
6393 CTTACACTGGGAATGAACTCTGTATG
1 CTTACACTGGGAATGAACTCTGTATG
*
6419 CTTAGACTGGGAATGAACTCTGTATG
1 CTTACACTGGGAATGAACTCTGTATG
6445 C
1 C
6446 CTACGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCTGTATG
Found at i:6616 original size:26 final size:26
Alignment explanation
Indices: 6578--6628 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
6568 CCGGTCCGAT
*
6578 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
6604 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTAGGAATGAACTCCGTAT
6629 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.24, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:6738 original size:185 final size:185
Alignment explanation
Indices: 6384--6719 Score: 467
Period size: 185 Copynumber: 1.8 Consensus size: 185
6374 ACCGTTGGTT
* * *
6384 CGGTCCGATCTTACACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTA
1 CGGTCCGATCTTACACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATACCTA
* * ** * ** **
6449 CGTTAACCCACGAAACGAGTGTGCGAGCGTTCAGCCGACCAGAGGGGCAGGATGCACAAGTTGGG
66 AGTCAACCCACGAAACGACCGTACGAGCACTCAGCCGACCAGAGGGGCAGGATGCACAAGCCGGG
6514 GATCGACCGGGTCCCCTCCTATGTGCTACTGATCCTGCTGTCGCAACCCTCGGTC
131 GATCGACCGGGTCCCCTCCTATGTGCTACTGATCCTGCTGTCGCAACCCTCGGTC
*
6569 CGGTCCGATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATACCTA
1 CGGTCCGATCTTACACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATACCTA
* * * * ** *
6634 AGTCAACGCATGAAACTACCGTACGGGCACTCAGCCGACCAGAGGGGCAGGATGTGCATGCCGGG
66 AGTCAACCCACGAAACGACCGTACGAGCACTCAGCCGACCAGAGGGGCAGGATGCACAAGCCGGG
*
6699 GATCGATCGGGTCGCCC-CCTA
131 GATCGACCGGGTC-CCCTCCTA
6720 CTTGCTGTCG
Statistics
Matches: 129, Mismatches: 21, Indels: 2
0.85 0.14 0.01
Matches are distributed among these distances:
185 126 0.98
186 3 0.02
ACGTcount: A:0.23, C:0.27, G:0.28, T:0.21
Consensus pattern (185 bp):
CGGTCCGATCTTACACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATACCTA
AGTCAACCCACGAAACGACCGTACGAGCACTCAGCCGACCAGAGGGGCAGGATGCACAAGCCGGG
GATCGACCGGGTCCCCTCCTATGTGCTACTGATCCTGCTGTCGCAACCCTCGGTC
Found at i:6900 original size:26 final size:26
Alignment explanation
Indices: 6864--6916 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6854 CTGGTCTGAT
* *
6864 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACCCCATATG
6890 CTTAGACTGGGAATGAACCCCATATG
1 CTTAGACTGGGAATGAACCCCATATG
6916 C
1 C
6917 CTAAGTCAGC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACCCCATATG
Found at i:9108 original size:875 final size:872
Alignment explanation
Indices: 6890--13227 Score: 8082
Period size: 875 Copynumber: 7.2 Consensus size: 872
6880 ACTCCGTATG
* * * * * *
6890 CTTAGACTGGGAATGAACCCCATATGCCTAAGTCAGCCCATGAAATGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
6955 CGGCCAGAGGGGCAAGATGCGCAAGTCGGGGATCGGCTGGGTCCCCCT-AGTGTGCTCCCGATCC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTACCGATCC
* * * * * * *
7019 TGCTGCCACAATCCTCGATCTGGTCTGGTGTTAGACTGTGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * * * * *
7084 CCAACGAAACGAGCAGGCGGGCAGTCAGGCCCTATGCCGGCCAGAAAAGG-GGGATGCGCAGGCC
196 CCGACGAAA-GAACGGGCGAGCGGGCGGGCACTACGCCGGCCAG-AGAGGCGGGATGCGCAAGCC
* * * *
7148 GTGGATCGATAGGGCGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCTATGCGAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTCTGCCAATGCCATT
7213 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * * *
7278 CTCGTTTTCTATTTTTTATGATTTTTGAAACTTTTTACGATTTGGGTTTTTTTTTAAATTTTTTC
389 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACG-GTTCGGATTTTTTTTAAATTTTTTC
* ** * * * * * *
7343 AAAAATAATTTTGGCCCCAAACTTGGTGGAGGTGATCCGTGTATTTTTTTTGGCATTCA-AAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
7407 AAGTTCAGCTAAAAATTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
518 AA-TTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
7472 AGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
7537 TTCTTGAGGTTTGATGAGGGACAGGGGGCCAATATAAGGGACAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
** * *
7602 CATGTGCGCACACCCCCCGACACCCCTCAATCATCGGAACCCCAATGCCGTTGGTAAGGTTCTCC
712 CATGTGCGCACACCCCCCG-C-CCCC-CAATCATCGGAACCCCAATGCCGCCGATCAGGTTCTCC
** * * * * *
7667 GGTGGTGCTCCGACGATCGTGCCTCGGGC-AAAAAAAATACGGCACCAGCACATGCCCGATCCCA
774 GACGATGCTCCGACGATGGTGCCCCAGGCGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCA
* *
7731 GCATGTGCACCTGCAACCCTCGGTCCGATCCGAT
839 GCATGTGCACCTACAACCCTCGGTCTGATCCGAT
* *
7765 CTTAGACTGGGAATGAACTCCGTTTGCCTAAGTCAA-CCAGCGAAACGAGCGTGCGGACGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA-CGAAACGAGCGTGCGGGCGCTCAG
** * * * * * *
7829 CTTGCCAGTGGGGCGGGATGCGCAAGCCAGGGATCGATCGGGTCCCCCTCAGCGTGCTGCCTATC
65 CCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTACCGATC
* * *
7894 CAGCTACCGCAACCCTCGGTCCGGTCCGGTCCGATCTCAGACTGGGAATGAACTCCGTATGCCTA
130 CTGCTACCACAACCCTCGGTCCGGT-C--T--GATCTTAGACTGGGAATGAACTCCGTATGCCTA
*** * * *
7959 AGCCAACCGACGAAACGAGTAGGCG-GACGGGCGGGCACTATGCCGGCCAAAGAGGTGGGATGCG
190 AGCCAACCGACGAAA-GAACGGGCGAG-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCG
* *
8023 CAAGCCGTGGATCGATAGGGTGGTAAGTGGCTTTAGGCACATCTTCATATTTCTGC-CATGCCAA
253 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTC-TGCCAA
8087 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
317 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
* * **
8152 AAGACGACTCGTTTTCTATTTTTTACGATTTTTGAAACCTTTTACGGTTCGGGATTTTTTAAAAA
382 AAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTTTAAA
* * * * *
8217 TTTTTTCAGGAGGAGTTTTAGCTCCAAACTTGGTAGACGTGATCCTTGTGTTTTTGGTGGCATGC
446 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
*
8282 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAGAAGTGTCCC
511 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
8347 CATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGG
576 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
*
8412 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
641 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
8477 GCACATCATGTGCGCACACCCCCCGCCCCCCAATCGTCGAAACCCCAATGCCGCCGATCAGGTTC
706 GCACATCATGTGCGCACACCCCCCGCCCCCCAATCATCGGAACCCCAATGCCGCCGATCAGGTTC
* * * * *
8542 TCCGACGATGCTCCGACGATGGTGCCCCGGGTGAAAAAAAATGCAGCACCAGCACATGCTCGAGC
771 TCCGACGATGCTCCGACGATGGTGCCCCAGGCGAAAAAAAATACGGCACCAGCACATGCCCGAGC
*
8607 CCAGCATGTGCACCCACAACCCTCGGTCTGATCCGAT
836 CCAGCATGTGCACCTACAACCCTCGGTCTGATCCGAT
* * * * *
8644 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGTGGTCGCCCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** **
8709 CAGGTCAGAGGGGCAGGATGCTTAAGCCGGGGATAAACCGGGTCCCCCTCAGCGTGCTACCGATC
66 C-GGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTACCGATC
* *** * * ** * *
8774 TTGCTACTGTAACACTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAAGCCA
130 CTGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
8839 ACCGACGAAATGAACGGGCGAGCGGGCGGGCACTAGGTCGGCCAGAGAGACGGGATGCGCAAGCC
195 ACCGACGAAA-GAACGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
8904 GTGGATCGATAGGGTAGTAGGTGGGTTTAGGCGCATCTTCATATTTCTGCTCTGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTCTGCCAATGCCATT
* *
8969 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGATGTTTCATGGCAAGATGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
9034 CTCGTTTTCTATTTTTCACGA-TTTTCAAAATATTTTACAGTTCAGGATTTTTTTTCAATTTTTT
389 CTCGTTTTCTATTTTTCACGATTTTTGAAACT-TTTTACGGTTC-GGATTTTTTTTAAATTTTTT
** * * * *
9098 CAGAAGGAGTTTTCACCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCCTGTAAAAAA
452 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
9163 AAATTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTCC
517 AAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
9228 AGACAGTTTAATGGCTACT-GCTGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
9292 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTAAAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
9357 CATGTGCGCACACCCTTCCCGACCCCCCCAATCACCGGAACCCCAATGCCTCCGATCAAGTTCTC
712 CATGTGCGCACACCC--CCCG--CCCCCCAATCATCGGAACCCCAATGCCGCCGATCAGGTTCTC
* * * *
9422 CGACGATGCTCCGGCGATGGTGCCCCTGAC-AAAAAAAATACGGCACCAGCACATGCCTGAGCCC
773 CGACGATGCTCCGACGATGGTGCCCCAGGCGAAAAAAAATACGGCACCAGCACATGCCCGAGCCC
* * *
9486 AGCATGTGCACCTGCAACCCTCGGT-TCGGTTCGAT
838 AGCATGTGCACCTACAACCCTCGGTCT-GATCCGAT
* * * *
9521 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAGCGTGTGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * **
9586 TGGCCAGAAGGGCAGGATGCGCAAGCCAGGGATCGGCCAGGTCACCCTCAACGTGCTGTCGATCC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTACCGATCC
* * * * * *
9651 TGCTACCTCAACCCTCGGTCCAGTCTGAACTTGGACTGGGAATGAACACCGTATGTCTAAGCCAA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
9716 CCGACGAAACAAGTGGGC-AGGCGGGCGGGCACTACGCTGGCCAAAGAGACGGGATGCGCAAGCT
196 CCGACGAAAGAA-CGGGCGA-GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * *
9780 GTGGATTGATAGGGTAGTAGGTGGGTTTAGGAACATCTTCATATTTATGC-CATGCCAATGCCAT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTC-TGCCAATGCCAT
*
9844 TTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
323 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * ** *
9909 ACCCGTTTTCTTTTTTTCACGATTTTCAAAAGTTTTTACGGTTCGAGATTTTTTTTAAATTTTTT
388 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTTTAAATTTTTT
*
9974 CAGAAGGAGTTTTGGCCCCAAGCTTGGTAGACGTGATCCTTGTATTTTT-TTGGGCATGCACAAA
452 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAA
*
10038 AAAATTCAGCT-AAAACTCGAAGTGCACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
10102 CAGACACTTTAATGGCTACTGGAAGCAAACCTGTAAAATCTCAAACGCTATTTAAAGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
10167 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
** * * * * * *
10232 TCATGTGCGCACACCCCCCGGGCCCATCAATCACCAGAACCTCAATGCTGCCGATCAGATGCTCC
711 TCATGTGCGCACACCCCCC--GCCCCCCAATCATCGGAACCCCAATGCCGCCGATCAGGTTCTCC
* * * * *
10297 GGCGATGCTCCGGCGATGGTGCCCCAAGCAAAAAAAAATGA-GGCACCAGCACATGCCTGAGCCC
774 GACGATGCTCCGACGATGGTGCCCCAGGCGAAAAAAAAT-ACGGCACCAGCACATGCCCGAGCCC
* *
10361 AGCATGTGCACCTTCAACCCTCGGTCCGGTCCAATCTTAGAATGGAAATGAACTCCATCT
838 AGCATGTGCACCTACAA-CC-C--T-CGG-----TC------T-G--AT---C-CGA--T
* * *
10421 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGAGTGCT-AG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
10485 TCGGCCAGAGGGGCAGGATACACAAGCCGGGGATC-AGCCGGGTCCCCCTCAGCATGCTACCGAT
65 CCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCAGCGTGCTACCGAT
* * * * * ** * * * *
10549 CTTGCTGCCATAACCCTTGGTCTGGTCCAATCATCA-ACTGGGAATTAATTCCGTATGCCTAAGA
129 CCTGCTACCACAACCCTCGGTCCGGTCTGATC-TTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * * * *
10613 CAACCAACGAAACGAGCGGGCGGGCGAGTGGGCACTAAGCCGGCCAGAAAGGTGGGATGCACAAG
193 CAACCGACGAAA-GAACGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* * * *
10678 TCGTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTTTTC-CATGCCAATGCC
257 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTC-TGCCAATGCC
* *
10742 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTCCATGTGAAGTTTCATGGCAGGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * *
10807 CAACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTT
386 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTTTAAATTTT
* *
10872 TTGCAGAAGGGGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCAC
450 TT-CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCAC
* *
10937 AAAAAAATTCAGCTAAAAACTCGAAGTGGACAGGATTTTGTGACCATATGAAAAAAGTGTCCCCA
513 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
11002 TTTCAGACACTTTAATGGCTATTGGCAGCAAACTTATAAAATCTCAAATGCTCTTTAAGGGGGTG
578 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
11067 TGAGTTCTCGAGGTTTGATGAGGGATAGTGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGT
643 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
11132 ACATCATATGCGCACACCCCCCGGCCCCCCTAATCATTGGAACCCCAATGCCGTCGATCAGGTTC
708 ACATCATGTGCGCACACCCCCC-GCCCCCC-AATCATCGGAACCCCAATGCCGCCGATCAGGTTC
* * *
11197 TCTGACGATGCTCCGACGATGGTGCCCTAGGCGAAAAAAAATACGGCACCAGCGCATGCCCGAGC
771 TCCGACGATGCTCCGACGATGGTGCCCCAGGCGAAAAAAAATACGGCACCAGCACATGCCCGAGC
* * * *
11262 CCAGTATGTGCACCCACAACCCTCGATCTGGTCCGAT
836 CCAGCATGTGCACCTACAACCCTCGGTCTGATCCGAT
* * * *
11299 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACAAAACGAACGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
11364 CGGCCAGAGGTGCAGGATACGCAAGTCGGGGATCGATCGGGTCCCCCTCAGCGTGCTATCGATCC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTACCGATCC
** * * * * *
11429 TGCTGTCATAACCCTCAGTCCAGTCTAATCTTAGAATGGGAATGAACTCCGTATG-CTGAAGCCA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT-AAGCCA
* * * * * **
11493 ACTGATG--A-AACGAGCGAGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATGCGCAAGTTG
195 ACCGACGAAAGAACGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * * * *
11555 TGGATCGATAGCGTGGTACGTGGGTTTAGGCACACCTTCAAATTTTTGCTGTGCCAATGCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTCTGCCAATGCCATTT
*
11620 TTATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
11685 TCGTTTTTTATTTTTCACAATTTTTGAAACTTTTTACAGTTCAGGA-TTTTTTTAAATTTTTTCA
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTTTAAATTTTTTCA
* ** *
11749 GTAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGCGGGCATGCACAAAACA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
11814 ATTCAGCTAAAAACTCAAAGTGTATAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAG
519 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
11879 ACACTTTAATGGCTACTCGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
11944 CTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
** * * * * ** * *
12009 TGTGCGCACACCCCCCGCCCCCCTCAATCCCCGGAACCCTAATACTGCTGGCCAAGTTCTCCGAT
714 TGTGCGCACACCCCCCG-CCCCC-CAATCATCGGAACCCCAATGCCGCCGATCAGGTTCTCCGAC
* *
12074 GATGCTCTGACGATGGT-CCCC-GAGCG-AAAAAAATACGGCACCAGCGCATGCCCGAGCCCAGC
777 GATGCTCCGACGATGGTGCCCCAG-GCGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAGC
* * * * *
12136 ATGTGCACCTGCAACCCTTGGTCCGGTCTGAT
841 ATGTGCACCTACAACCCTCGGTCTGATCCGAT
*
12168 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
12233 CGACCAGAGGGGCAGGATGCGTAAGCCTGGGATTGACCGAGTCCCCCTCAGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTACCGATCC
* * * ** * *
12298 TGCTGCCACAACCTTCGGTCCAGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCGAAGCCAA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
12363 CCGACGAAACAA---GCGGGCGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATACGTAAGCCGT
196 CCGACGAAAGAACGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* * * * *
12425 GGATAGATAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTTCTACTGTGCCAATACCATTTT
261 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTCTGCCAATGCCATTTT
12490 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* ** *
12555 CGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAAATTTTTCAG
391 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTTTAAATTTTTTCAG
* * * * * * *
12620 AAGGAGTTTTGGTCCCAAACTAGGTAGACATGATCCTTGTATTTTTTTTTCGCATGTAGAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAA
* *
12685 ATTTAGCTAAAAACTCTAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
12750 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
12815 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * **
12880 TGTGCGCACACCCCCCAGCCCCCCAATCGTCAGAACCCCAATGCCGACGGTCAGGTTCTCCGGTG
714 TGTGCGCACACCCCCC-GCCCCCCAATCATCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACG
* * * * **
12945 ATGCTCCGGCGATGGTGCCCCAGGTGAAAAAAAATACAGCACCAGCACATGCCCTAGGTCAGCAT
778 ATGCTCCGACGATGGTGCCCCAGGCGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAT
**
13010 GTGCACC-AGCAACCCTTAGT-TCGATCCGAT
843 GTGCACCTA-CAACCCTCGGTCT-GATCCGAT
* * *
13040 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** ** **
13105 TGGCCAGAGGGTTAGGATGCGCAAGCCGGGGATCGGTCGGG-CCCCCTTCAGCGTGCTGTCGATC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCC-TCAGCGTGCTACCGATC
** * ** * *
13169 CTGCTGTCGCAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTTTGCCT
130 CTGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
13228 TTTTTTTATT
Statistics
Matches: 4775, Mismatches: 595, Indels: 189
0.86 0.11 0.03
Matches are distributed among these distances:
868 1 0.00
869 438 0.09
870 106 0.02
871 501 0.10
872 266 0.06
873 15 0.00
874 391 0.08
875 607 0.13
876 547 0.11
877 188 0.04
878 229 0.05
879 125 0.03
880 84 0.02
881 509 0.11
882 7 0.00
884 1 0.00
885 1 0.00
886 1 0.00
887 1 0.00
892 2 0.00
893 2 0.00
894 1 0.00
898 4 0.00
899 1 0.00
900 322 0.07
901 100 0.02
902 37 0.01
903 288 0.06
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (872 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTACCGATCC
TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAAGAACGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTCTGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGATTTTTTTTAAATTTTTTCAGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGCCCCCCAATCATCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATG
CTCCGACGATGGTGCCCCAGGCGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
CACCTACAACCCTCGGTCTGATCCGAT
Found at i:10305 original size:11 final size:11
Alignment explanation
Indices: 10289--10314 Score: 52
Period size: 11 Copynumber: 2.4 Consensus size: 11
10279 CTGCCGATCA
10289 GATGCTCCGGC
1 GATGCTCCGGC
10300 GATGCTCCGGC
1 GATGCTCCGGC
10311 GATG
1 GATG
10315 GTGCCCCAAG
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 15 1.00
ACGTcount: A:0.12, C:0.31, G:0.38, T:0.19
Consensus pattern (11 bp):
GATGCTCCGGC
Found at i:13260 original size:15 final size:15
Alignment explanation
Indices: 13236--13274 Score: 62
Period size: 15 Copynumber: 2.7 Consensus size: 15
13226 CTTTTTTTTA
*
13236 TTTA-TTATTTGTTT
1 TTTATTTATTTATTT
13250 TTTATTTATTTATTT
1 TTTATTTATTTATTT
13265 TTTATTTATT
1 TTTATTTATT
13275 AGATTAGGTT
Statistics
Matches: 23, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
14 4 0.17
15 19 0.83
ACGTcount: A:0.18, C:0.00, G:0.03, T:0.79
Consensus pattern (15 bp):
TTTATTTATTTATTT
Found at i:13268 original size:11 final size:11
Alignment explanation
Indices: 13229--13274 Score: 58
Period size: 11 Copynumber: 4.2 Consensus size: 11
13219 CGTTTGCCTT
13229 TTTTTTATTTA
1 TTTTTTATTTA
* *
13240 TTATTTGTTT-
1 TTTTTTATTTA
13250 TTTATTTATTTA
1 TTT-TTTATTTA
13262 TTTTTTATTTA
1 TTTTTTATTTA
13273 TT
1 TT
13275 AGATTAGGTT
Statistics
Matches: 29, Mismatches: 4, Indels: 4
0.78 0.11 0.11
Matches are distributed among these distances:
10 2 0.07
11 24 0.83
12 3 0.10
ACGTcount: A:0.17, C:0.00, G:0.02, T:0.80
Consensus pattern (11 bp):
TTTTTTATTTA
Found at i:13290 original size:4 final size:4
Alignment explanation
Indices: 13232--13274 Score: 56
Period size: 4 Copynumber: 11.5 Consensus size: 4
13222 TTGCCTTTTT
*
13232 TTTA TTTA -TTA TTTG TTT- TTTA TTTA TTTA TTT- TTTA TTTA TT
1 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA TTTA TT
13275 AGATTAGGTT
Statistics
Matches: 35, Mismatches: 1, Indels: 6
0.83 0.02 0.14
Matches are distributed among these distances:
3 9 0.26
4 26 0.74
ACGTcount: A:0.19, C:0.00, G:0.02, T:0.79
Consensus pattern (4 bp):
TTTA
Found at i:13315 original size:5 final size:5
Alignment explanation
Indices: 13305--13388 Score: 70
Period size: 5 Copynumber: 17.2 Consensus size: 5
13295 CCTTTTTACC
* * *
13305 TTTAT TTTAT TTTAT TTTA- CTT-T TTTATT TTTGT TTTAC TTT-T TTTAT
1 TTTAT TTTAT TTTAT TTTAT TTTAT TTTA-T TTTAT TTTAT TTTAT TTTAT
*
13353 TTTA- TTT-T TTTAT TTTCACT TTTAT TTTGT TTTAT T
1 TTTAT TTTAT TTTAT TTT-A-T TTTAT TTTAT TTTAT T
13389 ATTTATTTCC
Statistics
Matches: 63, Mismatches: 8, Indels: 16
0.72 0.09 0.18
Matches are distributed among these distances:
4 13 0.21
5 40 0.63
6 6 0.10
7 4 0.06
ACGTcount: A:0.14, C:0.05, G:0.02, T:0.79
Consensus pattern (5 bp):
TTTAT
Found at i:13332 original size:13 final size:13
Alignment explanation
Indices: 13332--13375 Score: 52
Period size: 14 Copynumber: 3.2 Consensus size: 13
13322 TACTTTTTTA
*
13332 TTTTTGTTTTACTT
1 TTTTTATTTTAC-T
*
13346 TTTTTATTTTATT
1 TTTTTATTTTACT
13359 TTTTTATTTTCACT
1 TTTTTATTTT-ACT
13373 TTT
1 TTT
13376 ATTTTGTTTT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
13 11 0.42
14 15 0.58
ACGTcount: A:0.11, C:0.07, G:0.02, T:0.80
Consensus pattern (13 bp):
TTTTTATTTTACT
Found at i:13350 original size:20 final size:20
Alignment explanation
Indices: 13298--13360 Score: 78
Period size: 19 Copynumber: 3.2 Consensus size: 20
13288 TTAGTATCCT
13298 TTTTACCTTTATTTTA-TTTTA
1 TTTTA-CTTT-TTTTATTTTTA
*
13319 TTTTAC-TTTTTTATTTTTG
1 TTTTACTTTTTTTATTTTTA
13338 TTTTACTTTTTTTA-TTTTA
1 TTTTACTTTTTTTATTTTTA
13357 TTTT
1 TTTT
13361 TTTATTTTCA
Statistics
Matches: 38, Mismatches: 2, Indels: 6
0.83 0.04 0.13
Matches are distributed among these distances:
18 5 0.13
19 20 0.53
20 8 0.21
21 5 0.13
ACGTcount: A:0.14, C:0.06, G:0.02, T:0.78
Consensus pattern (20 bp):
TTTTACTTTTTTTATTTTTA
Found at i:13361 original size:20 final size:20
Alignment explanation
Indices: 13297--13361 Score: 82
Period size: 20 Copynumber: 3.2 Consensus size: 20
13287 TTTAGTATCC
13297 TTTTTACCTTTATTTTATTTTA
1 TTTTTA-CTTT-TTTTATTTTA
13319 -TTTTAC-TTTTTTATTTT-
1 TTTTTACTTTTTTTATTTTA
13336 TGTTTTACTTTTTTTATTTTA
1 T-TTTTACTTTTTTTATTTTA
13357 TTTTT
1 TTTTT
13362 TTATTTTCAC
Statistics
Matches: 39, Mismatches: 0, Indels: 10
0.80 0.00 0.20
Matches are distributed among these distances:
18 9 0.23
19 8 0.21
20 16 0.41
21 6 0.15
ACGTcount: A:0.14, C:0.06, G:0.02, T:0.78
Consensus pattern (20 bp):
TTTTTACTTTTTTTATTTTA
Found at i:13390 original size:13 final size:14
Alignment explanation
Indices: 13305--13396 Score: 50
Period size: 13 Copynumber: 6.5 Consensus size: 14
13295 CCTTTTTACC
*
13305 TTTATTTTATTTTAT
1 TTTATTTTA-CTTAT
13320 TTTACTTTT--TTATT
1 TTTA-TTTTACTTA-T
* *
13334 TTTGTTTTACTTTT
1 TTTATTTTACTTAT
*
13348 TTTATTTTA-TTTT
1 TTTATTTTACTTAT
13361 TTTATTTTCACTTTTAT
1 TTTATTTT-AC--TTAT
*
13378 TTTGTTTTA-TTA-
1 TTTATTTTACTTAT
13390 TTTATTT
1 TTTATTT
13397 CCTTTAAATA
Statistics
Matches: 63, Mismatches: 6, Indels: 19
0.72 0.07 0.22
Matches are distributed among these distances:
12 6 0.10
13 22 0.35
14 14 0.22
15 6 0.10
16 5 0.08
17 10 0.16
ACGTcount: A:0.15, C:0.04, G:0.02, T:0.78
Consensus pattern (14 bp):
TTTATTTTACTTAT
Found at i:13391 original size:33 final size:31
Alignment explanation
Indices: 13298--13392 Score: 82
Period size: 33 Copynumber: 2.8 Consensus size: 31
13288 TTAGTATCCT
* *
13298 TTTTACCTTTATTTTATTTTATTTTACTTTTTTA
1 TTTTACTTTTATTTT-TTTTA--TTATTTTTTTA
** *
13332 TTTTTGTTTTACTTTTTTTATTTTATTTTTTTA
1 TTTTACTTTTA-TTTTTTT-TATTATTTTTTTA
13365 TTTTCACTTTTATTTTGTTTTATTATTT
1 TTTT-ACTTTTATTTT-TTTTATTATTT
13393 ATTTCCTTTA
Statistics
Matches: 49, Mismatches: 8, Indels: 9
0.74 0.12 0.14
Matches are distributed among these distances:
33 25 0.51
34 19 0.39
35 5 0.10
ACGTcount: A:0.15, C:0.06, G:0.02, T:0.77
Consensus pattern (31 bp):
TTTTACTTTTATTTTTTTTATTATTTTTTTA
Found at i:13578 original size:59 final size:58
Alignment explanation
Indices: 13414--13871 Score: 598
Period size: 59 Copynumber: 7.7 Consensus size: 58
13404 ATAAAATTCA
* *
13414 AAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAAGAAAGTTTCC
1 AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAAGTTT-C
* *
13473 AAAAAAATATATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAAATTTC
1 --AAAAA-A-ATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAAGTTTC
** * *
13535 AAAAAAAGGGTTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCTTGAAAATCAAAGTTTCC
1 AAAAAAA-TATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAAT-AAAGTTT-C
* * *
13596 AAAAAAATATTTTTGGGGAAAGGTTGAAAGTATCAATTTTCCTTAAAAATAAAATTTC
1 AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAAGTTTC
* *
13654 AAAAAAAAAGTTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTGAAAATCAAAGTTTC
1 AAAAAAATA-TTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAAT-AAAGTTTC
* *
13714 -CAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAATTTTC
1 AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAAGTTTC
* *
13771 -AAAAAATCAATTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCTCT-AAATTAAAGTTTC
1 AAAAAAAT--ATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT-TAAAAATAAAGTTTC
* * *
13830 AAAAGAATATTTTTAAGGAAAAGTTAAAAGTATCAATTTTCC
1 AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCC
13872 CTGTGCAAGA
Statistics
Matches: 354, Mismatches: 32, Indels: 25
0.86 0.08 0.06
Matches are distributed among these distances:
57 13 0.04
58 81 0.23
59 134 0.38
60 62 0.18
61 13 0.04
62 2 0.01
63 49 0.14
ACGTcount: A:0.44, C:0.09, G:0.14, T:0.33
Consensus pattern (58 bp):
AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATAAAGTTTC
Found at i:13640 original size:119 final size:118
Alignment explanation
Indices: 13394--13871 Score: 662
Period size: 117 Copynumber: 4.0 Consensus size: 118
13384 TTATTATTTA
* * * *
13394 TTTCCTT-TAAATAAAA-TTCAAAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCT
1 TTTCCTTAAAAATAAAATTTCAAAAAAAAAATTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCT
** *
13457 TAAAAAGAAAGTTTCCAAAAAAATATATATTTTTGGGGAAAAGTTGAAAGTATCAAT
66 TAAAATCAAAGTTTCC--AAAAA-A-ATATTTTTGAGGAAAAGTTGAAAGTATCAAT
***
13514 TTTCCTTAAAAATAAAATTTCAAAAAAAGGGTTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCT
1 TTTCCTTAAAAATAAAATTTCAAAAAAAAAATTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCT
* *
13579 TGAAAATCAAAGTTTCCAAAAAAATATTTTTGGGGAAAGGTTGAAAGTATCAAT
66 T-AAAATCAAAGTTTCCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAAT
* *
13633 TTTCCTTAAAAATAAAATTTCAAAAAAAAAGTTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TTTCCTTAAAAATAAAATTTCAAAAAAAAAATTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCT
13698 TGAAAATCAAAGTTTCC--AAAAATATTTTTGAGGAAAAGTTGAAAGTATCAAT
66 T-AAAATCAAAGTTTCCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAAT
* **
13750 TTTCCTTAAAAATAAATTTTCAAAAAATCAATTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCT
1 TTTCCTTAAAAATAAAATTTCAAAAAAAAAATTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCT
* * * *
13815 CT-AAATTAAAGTTT-CAAAAGAATATTTTTAAGGAAAAGTTAAAAGTATCAAT
66 -TAAAATCAAAGTTTCCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAAT
13867 TTTCC
1 TTTCC
13872 CTGTGCAAGA
Statistics
Matches: 329, Mismatches: 23, Indels: 15
0.90 0.06 0.04
Matches are distributed among these distances:
115 1 0.00
116 11 0.03
117 130 0.40
118 1 0.00
119 109 0.33
120 8 0.02
121 13 0.04
122 43 0.13
123 13 0.04
ACGTcount: A:0.44, C:0.09, G:0.13, T:0.34
Consensus pattern (118 bp):
TTTCCTTAAAAATAAAATTTCAAAAAAAAAATTTTTGAGGAAAAGTTGAAAGTATCAATCTTCCT
TAAAATCAAAGTTTCCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAAT
Found at i:13868 original size:27 final size:27
Alignment explanation
Indices: 13776--13869 Score: 66
Period size: 27 Copynumber: 3.3 Consensus size: 27
13766 TTTTCAAAAA
* *
13776 ATCAATTTTTGAGGAAAAGTTGAAAGT
1 ATCAATTTTTAAGGAAAAGTTAAAAGT
*** *
13803 ATCAATCTTCCTCTAAATTAAAGTTTCAAAAGA
1 ATCAAT-TT--T-TAAGGAAAAG-TT-AAAAGT
13836 AT--ATTTTTAAGGAAAAGTTAAAAGT
1 ATCAATTTTTAAGGAAAAGTTAAAAGT
13861 ATCAATTTT
1 ATCAATTTT
13870 CCCTGTGCAA
Statistics
Matches: 49, Mismatches: 10, Indels: 16
0.65 0.13 0.21
Matches are distributed among these distances:
25 7 0.14
26 2 0.04
27 18 0.37
28 3 0.06
30 3 0.06
31 8 0.16
32 2 0.04
33 6 0.12
ACGTcount: A:0.43, C:0.09, G:0.13, T:0.36
Consensus pattern (27 bp):
ATCAATTTTTAAGGAAAAGTTAAAAGT
Found at i:14591 original size:26 final size:26
Alignment explanation
Indices: 14562--14614 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14552 CCGGTCCGAT
* *
14562 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14588 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14614 C
1 C
14615 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:18168 original size:26 final size:26
Alignment explanation
Indices: 18130--18179 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
18120 CCAGTTCGAT
* *
18130 CTTAGATTGGGAATGAACTCCGTAAG
1 CTTAGACTAGGAATGAACTCCGTAAG
18156 CTTAGACTAGGAATGAACTCCGTA
1 CTTAGACTAGGAATGAACTCCGTA
18180 TGCCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.18, G:0.24, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTAAG
Found at i:18521 original size:902 final size:896
Alignment explanation
Indices: 14343--20196 Score: 7215
Period size: 882 Copynumber: 6.6 Consensus size: 896
14333 CTAGACGTTA
*
14343 TGAT-AGGGATAGGGGACCAATATAAGGGCCAAGTAGCAGCACCCATCGCACATCATGTGCGCAC
1 TGATGAGGGATAGGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-
* **
14407 AGACCCCCACCGCCCCCCCAATCGTCGAAACCCCAATGCCGCCAGTCAGGTTCGCCGGTGATGCT
64 ACACCCCC-CCG--CCCCCAATCACCGAAACCCCAATGCCGCC-GTCAGGTTCGCCGGTGATGCT
* * * * *
14472 CTGGCGATGGTGCCCCGGGTGAAAAAAAATACAGCACAAGCATATGCCTGAGCCCAGCATCTGCA
125 CCGGTGATGGTGCCCTGGGCG-AAAAAAATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCA
* * *
14537 CCTGCAACCCTCGATCCGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTAGGAAT
189 CCTGCAACCCTCGGTCC-GTTCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * *
14602 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGCGCTCAGCCGACCAGAGGGGTA
253 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCA
*
14667 GGATGCGCAAGCCGGGGATCGATCGGGTCCTCCTCTACGT-CTGCCGATCCTACTGTCGCAACCC
318 GGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCC
*
14731 TCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
383 TCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * * * *
14796 CGATGGGCAGGCGGGTACTACGTCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
448 AGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
*
14861 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATGGCTTGTAAA
513 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAA
14926 TTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
578 TTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
** * * * *
14991 TCACGATTTTTGAAACTTTTTACGGTTCGGGACTTTTTTAAATTTTTTCAGAAGTATTTTTGGCC
643 TCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTTAAAATTTTTCAGAAGGAGTTTTGGCC
* *
15056 CCAAACTTGGTAGACGTGATCCTGGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAACACT
708 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
15121 CGAAGTGTACAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTA
773 CGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
*
15185 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTT
838 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * * *
15244 TGATGAGGGATAGGGAGCCAATATAAGTGCCATGTACAAGCACTCATTG-ACATCATGTGCGCAC
1 TGATGAGGGATAGGG-GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-
** * * *
15308 ACACCCTGCC-CCCCCAATCCCCGAAACCCCAATGCCG-C-T--GG-T--CAGGT--T-CTCCGA
64 ACACCCCCCCGCCCCCAATCACCGAAACCCCAATGCCGCCGTCAGGTTCGCCGGTGATGCTCCGG
* * * * * * * * *
15362 TGATGGTGGCCTGAGCGAAAAAATATATGGCACTAGGACATGCCTGAGCCTAGCATATGCACCCG
129 TGATGGTGCCCTGGGCGAAAAAA-ATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCACCTG
* * * * *
15427 CAACCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTCGACTGGGAATGAAC
193 CAACCCTCGGTCCGTTC-GATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
15492 TCCGTATGCCTAAGTCAACCTATGAAATGAACGTGCTGGCGCTCAGCC-AGCCAGAGGGGCAGGA
257 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGA-CCAGAGGGGCAGGA
* * * ** * *
15556 TGCGCAAGCCAGGGATCGATCGGGT-CCCCTCTGCGTGCTGTCGATCCTACTACCACAACCCTTG
321 TGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCCTCG
* * * *
15620 GTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGC---
386 ATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGG
* * * * * * * * *
15682 -GGGCGGGCAGGCACTGCGTCGGCTAGTGAGACAGGATGTGTAATCCATGGATCGATAGGGTGGT
451 TGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* *
15746 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTCATGGCTTGTAAGTTC
516 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * *
15811 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCA
581 ATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* *** * * *
15876 TGATTCCGGAAACTTTTTACGATTCAAGATTTTTTTTTAAATTTTTCAGAAGGAGTTTTAGCCCC
646 CGATTTTTGAAACTTTTTACGGTTCAAGA-TTTTTTTAAAATTTTTCAGAAGGAGTTTTGGCCCC
* * * *
15941 AAACTTAGTATACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCG
710 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
*
16006 AAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACT
775 AAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
16071 GGCAGCAAACCTGTAAAATCTCAAATCCTCTTTAAGGGGGTTTGAGTTCTCGAGGTT
840 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * *
16128 TGATGAGGGATAGAGGGCCAATATAAGCGCCAAGTACTAGCACCCATCACACATCATGTGCGCAC
1 TGATGAGGGATAG-GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-
* * * *
16193 AGACCCCCCCGCCCCCTAATCATCGGAACCCCAATGCTGCCAGTCAGGTTCGCCGGTGATGCTCC
64 ACACCCCCCCGCCCCC-AATCACCGAAACCCCAATGCCGCC-GTCAGGTTCGCCGGTGATGCTCC
* ** *
16258 GGTGATGGTGCCCCGGGCGAAAAAAAATGTGGCACAAGCATATACCTGAGCCCAGCATCTGCACC
127 GGTGATGGTGCCCTGGGCG-AAAAAAATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCACC
* * * *
16323 TGCAACCCTCGGTCCAGTCCGATCTTAGATTGTGAATGAACTTCGTATGCTTAGACTAGGAATGA
191 TGCAACCCTCGGTCC-GTTCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * *
16388 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCACTCTGCCGACCAGAGGGGTAGG
255 ACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCAGG
* * * * * *
16453 ATGCACAAGCCGGGGATCGAACGGGTCCCCCTCTACGTGCTGGCAATCCTACTATCGCAACCCTT
320 ATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCCTC
*
16518 GATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTATGCCAACCGACGAAACGAGCAG
385 GATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAG
* * *
16583 GTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGTAACCCGTGGATCGATAGGGTGG
450 GTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*
16648 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATGGCTTGTAAATT
515 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATT
* *
16713 CATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCAAGGCAAGACAACTCGTTTTCTATTTTTC
580 CATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * *
16778 ACGATTTCTGAAACTTTTTACGGTTCGTAA-ATTTTTTTAAATTTTTTTAGAAGGA-ATTTGGCC
645 ACGATTTTTGAAACTTTTTACGGTTC--AAGATTTTTTTAAAATTTTTCAGAAGGAGTTTTGGCC
* *
16841 CCAAACTTGGTAGACGTGATTCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAACACT
708 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
16906 CGAAGTGTACAGGA-TTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCTAGACACTTTAATGGCT
773 CGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCT
*
16969 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTT
837 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * ** *
17029 TGCTGAGGGATAGGGAGCCAATATAAGTGCCATGTACCAGCACTTATTG-ACATCATGTGCGC-A
1 TGATGAGGGATAGGG-GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAA
* *
17092 CACCCCCTGCC-CCCCCAATCCCCGAAACCCCAATGCCG-C-T--GG-T--CAGGT--T-CTCCG
65 CACCCCC--CCGCCCCCAATCACCGAAACCCCAATGCCGCCGTCAGGTTCGCCGGTGATGCTCCG
* * * * * * *
17146 GTGATGGTGGCCTGAGC-ATAAAAATATATGGCAGC-AGGACATGCCCGAGCCCAGCATATGCAC
128 GTGATGGTGCCCTGGGCGA-AAAAA-ATACGGCA-CAAGCATATGCCTGAGCCCAGCATCTGCAC
** * * * *
17209 CCACAACCCTCGATCCGGTCTGATCTTAGATTGGGAATGAACTCCATATGCTTCGACTGGGAATG
190 CTGCAACCCTCGGTCCGTTC-GATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * *
17274 AACTCCGTATGCCTAAGTCAACCCATGAAATGAACGTGCTGGCGCTCAGCC-AGCCAGAGGGGCA
254 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGA-CCAGAGGGGCA
* * * * * * *
17338 GGATGCGCAAGCCAGGGATCGACCGAGT-CCCCTCTATGTGCTGTCGATCCTACTGCCACAACCC
318 GGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCC
* * * *
17402 TTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-TAAA--ATG
383 TCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-G
** * * * * * * *
17464 -A-GTGGGCGGGCATGCACTGCGTCGGCTAGTGAGACGGGATGTGTAATCCATGGATCGATAGGG
447 CAGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
17527 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAA
512 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAA
* *
17592 GTTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
577 ATTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * *
17657 TTCATGATTTTGGAAACTTTTTACGATTCAAGATTTTTTTTAAAATTTTTCAGAAGGAGTTTTGG
642 TTCACGATTTTTGAAACTTTTTACGGTTCAAGA-TTTTTTTAAAATTTTTCAGAAGGAGTTTTGG
* * * *
17722 CCCCAAACTTAGTATACGTGATCCTTGTATTTTTTTTGGTATGCACAAAAAAATTCAGCTAAAAA
706 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
17787 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
771 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * *
17852 TACTGGCAGCAAACCTGTAAAATCTTAAATCCTCTTTAAGGGGGTTTGAGTT-TCGAGGTT
836 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
17912 TGATGAGGGATAGAAGGCCAATATAAGGGCCAAGTACTAGCACCCATCACACATCATGTGTGCAT
1 TGATGAGGGATAG-GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-
* * * *
17977 AGACCCCCCCCGCCCCCTACTCATCGGAACCCCAATGCCGCCAGTCAGGTTCGCCGGTGATGCTC
64 ACA-CCCCCCCGCCCCC-AATCACCGAAACCCCAATGCCGCC-GTCAGGTTCGCCGGTGATGCTC
*
18042 CGGCGATGGTGCCCTGGGCGAAAAAAATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCACC
126 CGGTGATGGTGCCCTGGGCGAAAAAAATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCACC
* * *
18107 TACAACCCTCGGTCCAGTTCGATCTTAGATTGGGAATGAACTCCGTAAGCTTAGACTAGGAATGA
191 TGCAACCCTCGGTCC-GTTCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* *
18172 ACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGTAGG
255 ACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCAGG
* * *
18237 ATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTATGTGCTGCCGATCCTGCTGTCGCAACCCTC
320 ATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCCTC
* * *
18302 GATCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTATGCCAACCGACGAAACGAGCAG
385 GATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAG
** * *
18367 GTGGGCGGGCGGGCACTATATCGGCCAGAGAGACGGGAAGCGCAACCCGTGGATCGATAGGGTGG
450 GTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * *
18432 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCACGCCAATGCCATTTTTATGGCTTGCAAATT
515 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
18497 CATAGAATGGTCCCTTAAGCCTTCATGTAAAGTTTCAAGGCAAGACAACTCGTTTTCTATTTTTC
580 CATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
** *
18562 ACGATTTTTGAAACTTTTTACGGTTCGGGACTTTTTTTAAATTTTTTCAGAAGGA-TTTTGGCCC
645 ACGATTTTTGAAACTTTTTACGGTTCAAGA-TTTTTTTAAAATTTTTCAGAAGGAGTTTTGGCCC
* *
18626 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATACACAAAAAAATTCAGCTAAACACTC
709 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
18691 GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
774 GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
18756 TGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTTTGAGTTCTCGAGGTT
839 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
18814 TGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC-A
1 TGATGAGGGATAG-GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAA
* * * * *
18878 CACCCCCCGGCCCCCCAATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCC---GA-----C-
65 CACCCCCCCG-CCCCCAATCACCGAAACCCCAATGCCGCC-GTCAGGTTCGCCGGTGATGCTCCG
* * * * *
18934 --GATGCT--CCT--GCG------AT--GG----TGC-----CCTGAGCCCAGCATGTGTACCCG
128 GTGATGGTGCCCTGGGCGAAAAAAATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCACCTG
* ** * *
18976 TAACCCTCGGTCCCATCTGATCTTAGACTGGAAATGAACTCCGTATGCTTAGACTGGGAATGAAC
193 CAACCCTCGGTCCGTTC-GATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* ** * * * *
19041 TCCGTATGTCTAAGTCAACCCACAAAATGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCAGAAT
257 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCAGGAT
* * * * * * *
19106 GTGCAAGCCGGGGATCGACCGGGT-CCCCT-TGCGTGCGGTCGATCCTGCT-ACTGCAACCCTCG
322 GCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTC-GCAACCCTCG
* ** ** * * * * * *
19168 GTCCAGTTTGATCTTATACTAGGAATGAACTCTGTATGCCTATGCCAACCGACGAAACAAGCGGG
386 ATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGG
** * ** * *
19233 CAGGCGGGCAGGCACTACACCAGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
451 TGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
19298 AGGTGTGTTTAGGCACATCTTCATATTTCTGCCATGGCAATGCCATTTTTATGTCTTGTAAATTC
516 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * *
19363 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCGAGACGACTCATTTTCTATTTTTCA
581 ATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* *** *
19428 TGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTAAAATTTTTTCAGATGGAGTTTTGGCCCC
646 CGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTTAAAA-TTTTTCAGAAGGAGTTTTGGCCCC
** *
19493 AAACTTCTTAGACGTGATCCTTGTATTTTT-TTGGGCATGCACAAAAAAATTCAGCTAAAAGCTC
710 AAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTC
* * * *
19557 AAAGTGTACAGGATTGTGTGACCATTTCAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
774 GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
19622 TGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGCGTGAGTTCTCAAGGTT
839 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * *
19680 TGATGAGGGATAGGGGGCCAATTTAGGGGACAAGTACCAGCACCCATCGCACATCATGTGCGC-A
1 TGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAA
* *** **
19744 CA--CCCCCG---------ACC----CCCCAATGCCGTCGATCAGGTTCTTTGACGATGCTCCGG
65 CACCCCCCCGCCCCCAATCACCGAAACCCCAATGCCGCCG-TCAGGTTCGCCGGTGATGCTCCGG
* * * * * * *
19794 TGATGGTGCCCCGGGCAAAAAAAAATGCGGCACCAGCACATG-CTCAGCCCAGCATGTGCA-CTC
129 TGATGGTGCCCTGGGC-GAAAAAAATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCACCT-
*
19857 GTAACCCTC-G---G-TC---C---GA-T-----T----T--G-AT-CTTAGACTGGGAATGAAC
192 GCAACCCTCGGTCCGTTCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* *
19897 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAACCGACTAGAGGGGCAGGAT
257 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCAGGAT
* * * * *
19962 GCGCAAGCC-GAGATTCGATCGGGTCCCCCTCTGCGTGTTGCCGATCCTGCT-ACTGCAACCCT-
322 GCGCAAGCCGGGGA-TCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTC-GCAACCCTC
* * * * *
20024 TAGTCTGGTCTGATCTTATACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA--AGAA
385 GA-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA
** * * * * *
20087 TGGCAGGCGGGTGGGCACTATGCCGGCCAGAGAGTCGGGATGCGCAAGCCATGGATCGATAGGGT
449 -GGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
* *
20152 GGCAGGTGGGTTTAGGCATATCTTCATATTTCTGCCATGCCAATG
513 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
20197 ACCGTTTGAA
Statistics
Matches: 4329, Mismatches: 500, Indels: 292
0.85 0.10 0.06
Matches are distributed among these distances:
849 1 0.00
850 20 0.00
853 2 0.00
854 2 0.00
855 3 0.00
856 93 0.02
857 105 0.02
858 81 0.02
860 1 0.00
861 5 0.00
863 2 0.00
864 17 0.00
865 300 0.07
866 248 0.06
867 152 0.04
869 1 0.00
870 2 0.00
872 4 0.00
873 1 0.00
874 2 0.00
876 2 0.00
877 2 0.00
878 4 0.00
880 2 0.00
881 3 0.00
882 450 0.10
883 227 0.05
884 253 0.06
885 51 0.01
886 368 0.09
887 221 0.05
888 9 0.00
889 4 0.00
890 6 0.00
891 2 0.00
892 7 0.00
893 4 0.00
894 1 0.00
895 9 0.00
896 4 0.00
897 194 0.04
898 314 0.07
899 147 0.03
900 30 0.01
901 345 0.08
902 405 0.09
903 220 0.05
904 1 0.00
905 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (896 bp):
TGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAAC
ACCCCCCCGCCCCCAATCACCGAAACCCCAATGCCGCCGTCAGGTTCGCCGGTGATGCTCCGGTG
ATGGTGCCCTGGGCGAAAAAAATACGGCACAAGCATATGCCTGAGCCCAGCATCTGCACCTGCAA
CCCTCGGTCCGTTCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
TATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGCGC
AAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCCTCGATCTG
GTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGTGGGC
GGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
ATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
TTTGAAACTTTTTACGGTTCAAGATTTTTTTAAAATTTTTCAGAAGGAGTTTTGGCCCCAAACTT
GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
ACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
Found at i:19037 original size:26 final size:26
Alignment explanation
Indices: 18997--19048 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
18987 CCCATCTGAT
18997 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
19023 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
19049 TCTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:22874 original size:862 final size:864
Alignment explanation
Indices: 20195--39960 Score: 19252
Period size: 863 Copynumber: 22.8 Consensus size: 864
20185 GCCATGCCAA
* * *
20195 TGACCGTTTGAAAAAAGTGTCCCCATTTCAAACAGTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * * *
20260 ATCTCAAATGCTCTTTAATGCGGTGTGAGTTCTCGAGCTTTGATGAGGGACAGGGGGCCAAGATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
20325 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-ACCCCCCAATCGCCGG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
* * * * * * * *
20388 AACCCCAATGCCGTCGGTCA-G--CTT-CTAAGAT-GATGGTGCCCCGAGAGAAAAAAAATTCGG
196 AACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATACGG
* * ** * ** *
20448 TACCAGAACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGAT-CTTAGACT
261 CACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGCTTAGACA
** * * * * * *
20512 GGGAATGAACTGTGTATGCCTAAGTTAGCCCATGAAATGAACGTGCGGGCACTCAGCCGGCTAGA
326 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAAA
* ** * * *
20577 GGGGCAGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTACTG
391 GGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCTACCG
*
20642 CAACCCTCAGTCT-AGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
456 CAACCCTCAGTCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * *
20706 AACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATACGCAAGCCGTGGATCG
520 AACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* **
20771 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAGATTTCTGAAATGCCAATGCCATTTTTATGGC
585 A-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA--G-
* * ** *
20836 TTGTAAATTAATACAATGGTCCCATAAGCCTTCATGTGAAGTTTCATGGTGAGACGACTTGTTTT
643 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * *
20901 CTATTTTTCAAGATTTTTGAAACTTTTTACGGTTTGGGATTCTTTTAAAATTTTTTCAGAAGGAG
708 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAG
20966 TTTTGGCCCCAAACTTGGTAGACGT-ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
773 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
21030 TAAAAACTCAAAGTGTATAGGATTTTG
838 TAAAAACTCGAAGTGTACAGGATTTTG
* * * * * *
21057 TTACCATTTGAAAAAATTGTCCCCATTTTAGACACATTAATGGCTACAGGTAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * *
21122 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATAAGGTATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * *
21187 AGGTCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCCCAATCGCCA
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC-GACCCCCCAATCGCCG
* * * * * *
21252 GAACGCCAATGCCGTC-AGCTA-GTTC-TCCATATGCTTCGCGAT-GTGCACC-TGC-AAAAAAA
195 GAACCCCAATGCCGCCGATC-AGGTTCTTCC-GATGC-T--CGATGGTGCCCCGGGCGAAAAAAA
* * * * *
21311 ATAAGGCCACCAGCACATG-CCGAG--CAGCATGTGCACCACAACTCGATCCCGATCTTAGACTG
255 ATACGG-CACCAGCACATGCCCGAGCCCAGCATGTGCA-C-CTA-T--AACCC--TC--GGTCTG
* * *
21373 GAATGACTTTGC-ATGCTTAGACTGGGAATGAACT-CGTATGTCTAAGTCAACCCAC-AAAAGAG
310 G--T--C----CAATGCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAG
* * * * *
21435 CGTCCGGCGC-CTTAGCCGGCCAGAA-GGGCAAGATGCGCAAGCCGAGGATCGACCGTGT--CCC
367 CGTGCGG-GCACTCAGCCGGCCA-AAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCC
* ** *
21496 TCTGCGTGCTGCCGATCCTGCTACAACAACCCTCAGT-TCAGTCTGATCTTAGACTGGGAATGAA
430 TCAGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGA-TCTGATCTTAGACTGGGAATGAA
* * * * *
21560 CTCTGTATGCCTATGCCAACCGACGAAACGAGTC-GGCGGGCGGGCAGGTACTA-GACCGACCAT
494 CTCCGTATGCCTAAGCCAACCGACGAAACGAG-CGGGCGGGCGGGCAGGCACTACG-CCGGCCAG
* * * *
21623 AGAGGTGGGATGCGTAGGCCGTGGATCGATAGGGTGGTAGGTGTGTTTAGGCACATCTTCATATT
557 AGAGGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATT
21688 TCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
618 TCTGCCATGCCAATGCCATTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * *
21753 GAAGTTTCATGGCAAGACGAGTCATTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTTGG
680 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
* ** * *
21818 G-TTTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTTTTAGACATGATACTTGTATT
745 GATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* *
21882 TTTGTTGGCATGCACAAAAAAATTCAACTAAAAACT-GAAAGTGTATAGGATTTTG
810 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG-AAGTGTACAGGATTTTG
* *
21937 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGCAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * *
22002 ATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTTGAAGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * **
22067 AGGGCTAGGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCTAATCATCG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCC-AATCGCCG
* *
22132 GAACCCCAATGCCGCCGATCAGGTTCTTCGGCGATGCTCCGACCATGGTGCTCCGAGCG-AAAAA
195 GAACCCCAATGCCGCCGATCAGGTTCTTC--CGATGCT-CG---ATGGTGCCCCGGGCGAAAAAA
* * *
22196 AATGCTGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAGCCCTCGGTCTGGTCCAAT-C
254 AATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGC
* * * * * * *
22260 TTACACAGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAACGTACGGGCACTCAACT
319 TTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCC
* * * ** *
22325 GGCCAAAGGGGCAGGATGTGCAAGTCGGGGATGGGTCGGGTCCCCCTCAGCGTGCTGTCGATCCT
384 GGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCT
* * ** *
22390 GCTGCCGCAACCCTCGGTCTGATCCAATCATAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
449 GCTACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
** * * * * * * * *
22455 CGACGAAACGAATGGACGGGTGGGCGGGCGC-ACGCCGGCTATAGAGGCGGGATGCACAAGCTGT
514 CGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
22519 GGATCG-A-TGG-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA-T
579 GGATCGAAGTGGTGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTAGT
22580 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
644 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * *
22645 TAATTTTCGTGATTTTGGAAACTTTTTACGGTTCAGGA-TTTTTTAAAA-TTTTTCAGAAGGATT
709 TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGT
* *
22708 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCCATGCACAAAATACTTCAGC
774 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG-CATGCACAAAAAAATTCAGC
* * *
22772 TGAAAACTCGAAGTGCATAGGATTTTG
838 TAAAAACTCGAAGTGTACAGGATTTTG
*
22799 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
22864 ATCCCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* ** * *
22929 AGGGCCAAGTACCAGCGCCCATCGCACATCATGTGCGCACA-CCCCCCGGTCCCCCAACCGCCAG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
* * * *
22993 AACCCCAATGCCGCCGATCAGGCTCTTTGGCGATGCTCCGACGATGGTG-GCCGGGTGAAAAAAA
196 AACCCCAATGCCGCCGATCAGGTTC-TT-CCGATGCT----CGATGGTGCCCCGGGCGAAAAAAA
* * * * * * ***
23057 ATACGACAGCAGCACATTCCAGAGCCTAGCATGTACACCCGCAACCCTCAGTTCGGTCCGATCTT
255 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAA-CC-C---TC-G---G----T
* * ** *
23122 AGACTAGGAATGAAATCCGTATGCTTAGACTGGGAATGAACTTTGTATGCCTAAGTCAACACACG
307 ---CT--G---G---TCC-AATGCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * *
23187 AAATGAGCGTGCGGGCGCTGAGCAGGCCAGAA-GGGCAGGATGCGTAAGCCGGGGATCGACCGGG
360 AAATGAGCGTGCGGGCACTCAGCCGGCCA-AAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGG
* * * * * *
23251 TCCCCCTTAGCGTGCTGCCAATCCTGCTACCGTAACCCTCAGTCCGGTTTGATCTTAGACTGGGA
424 TCCCCCTCAGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGA
* * *
23316 ATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCTGGCACTACGTCGGC
489 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGC
23381 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
554 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCAT
* *
23446 ATTTTTGCCATGCCAATGCCACTTTTATGGTTTGTAAATTCA-ACAATGGTCCCTTAAGCCTTCA
615 ATTTCTGCCATGCCAATGCCA-TTTT-TAG-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * **
23510 TGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTT
677 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT
* ** *
23575 TGGGATTTTTTTAAAATTTTTTCAGAATTAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGT
742 CGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
*
23640 ATTTTT-TTGGCATGCACAAGAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
807 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* *
23697 TGACCATTTGTAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* **
23762 ATCTCATATGCTCTTTAAGGGGGTGCAAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * *
23827 AGGGCCAAGTACCAGAACCCATCGCACATCATGTGCGCACACCCCCACC-ACCCCCCCAACCGTC
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CCGA-CCCCCCAATCGCC
* * * * * *
23891 GAAACCCTAATGTCGTCGATTAGGTT-TTCCGA----CGATGGTGGCCCGGGCG-AAAAAAATAC
194 GGAACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATAC
*** * *
23950 GGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCGGTCCTGGTTCGAT-CTTAG
259 GGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGT-CTGGTCCAATGCTTAG
* * * * * * *
24014 ACTA-AGAATGAACTCCGTATGGCTAAGTCAACCAATGAAACGAGCGTGCGGGCTCTCAGCCGAC
323 AC-AGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGC
* * * * * * * *
24078 CAGAGGGGCAAGATTCGCAAGTCGGGGATCGATCGGGT-CCCCTCAGTGTGCTACCGATCCTACT
387 CAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCT
* * * * *
24142 ACCGCAACCCTCAATCCGGT-TCAATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGCCAACCG
452 ACCGCAACCCTCAGTCTGATCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * *
24206 ATGAAACGAGCGGGTGGGTC-GGCAGGCACTACGCCGGCCAAAGAGGCGGGATGCGTATGCCGTG
516 ACGAAACGAGCGGGCGGG-CGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
*
24270 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTA
580 GATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT-
** * * * * *
24335 ATTCTTGTACATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGATGACTCC
640 -TAGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * *
24400 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACCGTTCGGTATTTTTTTAAAA-TTTTTCAAAA
704 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAA
* *
24464 GGATTTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTGTTGGCATGCACAAAAAAATT
769 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
*
24529 CAGGTAAAAACTCGAAGTGTACAGGATTTTG
834 CAGCTAAAAACTCGAAGTGTACAGGATTTTG
* *
24560 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACTTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * * *
24625 ATCTCATATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTAATGAGGGATAGGGGGCGAACATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* *
24690 AGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGGACACCCCCCCGACCCCCCAATCGCCGG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
* * * * * **
24755 AATCCCAATGCCCCCGGTGAGGTTC-TCCG--G-T-GATGGTACCCCGGGCGAAAAAAAATTTGG
196 AACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATACGG
** * **
24815 CAGTAGCACATGCCCGAGCCCATCATGTGCACCTGCAACCCTCGGTATGGTTCAATCTTAGACTG
261 CACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTC-----GG--------T---CT-
*
24880 GGAATGAACTCCATATGCTTAGACTA-GGAATGAATTCCGTATGCCTAAGTCAACCCACGAAATG
309 -G---G---TCCA-ATGCTTAGAC-AGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATG
* * * * *
24944 AGTGTGCAGGCGCTCAGCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCC
365 AGCGTGCGGGCACTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCC
* * * * * * * *
25009 TCAACGTGCTGCCAATCCTGCTACCACAACCATCGGTCTGGTCTGATCTTAAACTAGGAATGAAC
430 TCAGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAAC
* * *
25074 TCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGGGCGGGTAGGCACTACGTCGGCCAGAGA
495 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGA
25139 GGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTGT-
560 GGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATT-TC
**
25203 TGCTGTGCCAATGCCATTTTTATGGCTTGTAAATTCA-ACAATGGTCCCTTAAGCCTTCATGTGA
620 TGCCATGCCAATGCCATTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
* * * * *
25267 AGTTTCAAGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGTTTCAGGA
682 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
* *
25332 TTTTTTTAAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTT
747 TTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
25397 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTTTACAGGATTTTG
812 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
*
25450 TGACCATTTGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
25515 ATCTCAAATGCTCTTTAAGGGGGTGTGCGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* ** *
25580 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGACCCCCCACCCG-GGC
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCG-
**** * * * * *
25643 GAAAAAAAATAG--G-CTA-CAGTGTTGCCT-C-A-G-AC-AT--TGACCC-AGC--------AT
195 GAACCCCAAT-GCCGCCGATCAG-GTT-CTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAAT
* * * ** * * ** * **
25688 --GTTCACC--CACA-ACCTCG-G-TC--CATCCG-ATCT-TAGA--CTGGGAATGACTCGTATG
257 ACG-GCACCAGCACATGCC-CGAGCCCAGCATGTGCACCTATA-ACCCTCGGTCTG-GTCCAATG
* * * * *
25740 CTTAG--TGGGAATGAACTCCG---G-C---GTCAACCCACTAAAT-A---T--AGGCGCTCTGC
318 CTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
* * * * *
25790 AGG-CTAAGAGGGCAGGGATGCG-AA-CC-GGGATTG-TC-GGT-CCCCTCAGCGT-CTGTCGAT
383 CGGCCAAAG-GGGCA-GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGAT
** * *
25847 CCTGCT---G-AA-CCTTTGATCCGGTCTGATCTTAGACTGGG---G------GTATGCCT-AGC
446 CCTGCTACCGCAACCCTCAG-TCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
25897 C-A--G-TG---CGATCTGGGCGGG-GGG--GTCACTATGTC-G-C--AGA-----G-TGC-CAA
510 CAACCGACGAAACGAGC-GGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* * *
25941 G-CTTGGATCG-ATTGGT-ATGGGTTTTAGGCACA--TTCATA-TT-TGCC--GCCAATGCCATT
574 GCCGTGGATCGAAGTGGTGGTGGG-TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * * *
25997 TTTA--TG-----GC-T----T-G-----TAA--ATTCATGTGAAGTTTCATGGCAAGATGAATC
638 TTTAGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * **
26042 GTTTTCTATTTTTTATGATTTTTGAAACTTTTTACGATTCAAGATTTTTTTAAAATTTTTTCAGA
703 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGA
* *
26107 AGGAATTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
768 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
26172 TCAGCTAAATACTCAAAGTGTATAGGATTTTG
833 TCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* * *
26204 TGACCATTTGAGAAAAGTTTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
26269 ATCT-AAATGCTCTTTAAGGCAGG-GTGAGTTCTCGAGGTTTGATGAGGGATAGGTGGCCAATAT
66 ATCTCAAATGCTCTTTAAGG-GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * *
26332 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACA-CCCCCTG-CCCCCCAAATCGTC
130 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCC-AATCGCC
* * * *
26395 GGAACGCCAATGCCGTCGGTCAGGTTC-TCCGGTGATGCTCCGGCGATGGTGGCCCGGGC-AAAA
194 GGAACCCCAATGCCGCCGATCAGGTTCTTCC---GATGCT----CGATGGTGCCCCGGGCGAAAA
* * * * * ** *
26458 AAAATACGGCACCAGTACATGCTCGAGCCGAACATATGCACCCGTAACCCTCGGTCCTATTCGAT
252 AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGT-C---T-GGT
*
26523 CTTAGACTAGGAATGAACTCT-GTAAGCTTAGACTGGAAATGAACTCCGTATGGCTAAGTCAACC
312 C-----C----AATG--CT-TAG--A-C--AG---GG-AATGAACTCCGTATGCCTAAGTCAACC
* * * * * * * * * * * **
26587 TATC-AAATGAGCGTGTGGGCGCTAAGTCGGCCAGAGAGGCAGGATACGGAAGTCGAGGATCGGT
356 CA-CGAAATGAGCGTGCGGGCACTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGAC
* * * * * ** * * **
26651 TGGGTCCCCCTCTGCATGCTGCTGATCCTACTGA-TACAACCCTTAGTCTGGTCCAATCTTAGAC
420 CGGGTCCCCCTCAGCGTGCTGCCGATCCTGCT-ACCGCAACCCTCAGTCTGATCTGATCTTAGAC
* ** * * *
26715 TGGGAATGAATTCCGTATGCCTAAGCCAACCGATTAAACGAGCGGACGGGTGGGCCGGCACTACG
484 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACG
26780 CCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
549 CCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATC
* *
26845 TTCATATTTTTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTCCTTAAGC
610 TTCATATTTCTGCCATGCCAATGCCATTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGC
*
26910 CTTCATGTGAAGTTTCATGGCAAGACGACAT-GTTTTCTATTTTTCCTGATTTTTGAAACTTTTT
672 CTTCATGTGAAGTTTCATGGCAAGACGAC-TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT
* *
26974 ATGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTCGGCCCCAAACTTGGTAGATGTGA
736 ACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTT-GGCCCCAAACTTGGTAGACGTGA
* *
27038 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAATGTACAAGATTTTG
800 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
** *
27103 TGACCATTTGAAAAAAGTGTCCCCATTTTTGACACTTTAATGGCTACTGGCAGCAAACTTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * *
27168 ATGC-CAAATGCTCTTTAAAGGGGTGTGAGTTCACGAGGTTTGATGAGGCATAGAGGGCCAATAT
66 AT-CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* *
27232 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACACCCGCCCG-CCCCCCAATCGT
130 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCC-CCCGACCCCCCAATCGC
* ** * * * * ** *
27296 CGGGACCCCAATGCCATCGGTCAGATTCTCCGACGATGCTCCGACGATGGTGGCCCAAGTGAAAA
193 CGGAACCCCAATGCCGCCGATCAGGTTCTTC--CGATGCT----CGATGGTGCCCCGGGCGAAAA
** * *** **
27361 AAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGATCCAATCTGAT
252 AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAAT
* * * * * *
27426 -CTTAGACTGGGAATGAACTCTGTATGCCTAAGTTAACCCACCAAAACGAGCGTGCGGGCGCTCA
317 GCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCA-CGAAATGAGCGTGCGGGCACTCA
* * * * * *
27490 GCCGGCCAGACGGGCAGGATAG-GCAAGCCAGGGATCGGCCGGGTCTCCCTCAGCGTGCTGTCGA
381 GCCGGCCAAAGGGGCAGGAT-GCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGA
** * * * * ** * * *
27554 TCCTGCTGTCACAACTCTCAGTCCGGTCCAATCATAGATTGGGAATGAACTCCGTATGCTTAAGC
445 TCCTGCTACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * * **
27619 CAACTGACGAAACGAGCGGGCAGACGGGCGGGCATTATGCCAGTTAGAGAGGCGGGATGCGCAAG
510 CAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* *
27684 CCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCA
575 CCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
* * * * *
27749 TTTTTATGGCTTGCAAATTCATACAATAGTCCCTTAAGCCTTCTTGTGAGGTTTCATGGCAAGAT
636 TTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* *
27814 GACAT-GTTTTTTATTTTTCCTGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTT
698 GAC-TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTT
* *
27878 TTCAGAAGGAGTTTCGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAA
762 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
27943 AACAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
827 AAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* *
27981 TGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATAGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
28046 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATA-GGGG-C-ATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * *
28108 AGTGCCAAGT-CCAGCA-CCATCGCACATCA-GTGCACACCAACCCCGCTG-CCCCTCCAATCGC
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-C-ACCCCCCCGACCCC-CCAATCGC
* * *
28169 TGGAAACCCCAATGCCGACCGATCAGGTTCTTTTCCGA---T-GATGGTG--GCTGGCTAGAAAA
193 CGG-AACCCCAATGCCG-CCGATCAGGTTC--TTCCGATGCTCGATGGTGCCCCGGGC--GAAAA
* * ** * * *
28228 AAAATGCCAGGCACCACACACATGCTTGAGCCCAGCATGTGCACCCGCCACCCTCAGTCCAGTCG
252 AAAAT-AC-GGCACCA-GCACATGCCCGAGCCCAGCATGTGCA--C-CTA---T-A-ACC-CTCG
*
28293 ACGATCTTAGACTGGGAAATGAAAACTCCGTATGCTTAGACAGGGAATGAAGCTTCCGTTATGCC
305 --G----T---CT--G----G-----TCC-AATGCTTAGACAGGGAATGAA-C-TCCG-TATGCC
* * * * *
28358 TAAGTCAACCCACGAAACGA-CGTAACCAGGCGCTCAG-C-GCCAAGAGGGGCAGGATGCG-TAG
346 TAAGTCAACCCACGAAATGAGCGT--GCGGGCACTCAGCCGGCCAA-AGGGGCAGGATGCGCAAG
* * * ** * *
28419 TCGGGGCTCGACCGGGGTCCCCCTCAGCGTG-T-CTGATCCT-CTGTCGCAACCCTCAGTCCGGT
408 CCGGGGATCGACC-GGGTCCCCCTCAGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGAT
* * * * * *
28481 CTAATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCAGACGG
472 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * *
28546 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAG
537 GCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGG
28611 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
598 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA--G-TTGTAAATTCATACAAT
*
28676 GGTCCCTTAAGCCTTCATTTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACTGATTT
660 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA-TGATTT
28741 TTGAAAC-TTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTT
724 TTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTT
*
28805 GGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
789 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
28870 ACAGGATTTTG
854 ACAGGATTTTG
28881 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
28946 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGTTAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* *
29011 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACACCCGCCC--CCCCCCAATCGTC
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCC-CCCGACCCCCCAATCGCC
* * * * * * * * *
29074 GGGACCCTAGTGCCACCGGTCAGATTCTCCGGCGATGCTCCGACGATGGTGACCCAGGCGAAAAA
194 GGAACCCCAATGCCGCCGATCAGGTTCTTC--CGATGCT----CGATGGTGCCCCGGGCGAAAAA
** * * **
29139 AAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCAACTATAACCCTCGGTCCGGTCTGAT-
253 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATG
* * * * * *
29203 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAACGAGCATGCGGGCGCTCAGC
318 CTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
* * * ** ** *
29268 CGGCCAGAGGGGCAGGATACGCAAGCCAGGGATCGGTCGGGTCCCCCTCAGCGTGCTATCAATCC
383 CGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCC
** * * * * ** * * *
29333 TGCTGTCACAACTCTCGGTCTGGTCCAATCATAGACTAGGAATGAACTCCGTATGCTTAAGCCAA
448 TGCTACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * **
29398 CCGACGAAATGAGGGGGCAGACGGGCGGGCACTATGCCAGTTAGAGAGGCGGGATGCGCAAGCCG
513 CCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * *
29463 TGCATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCCATCCCAATGCCATTT
578 TGGATCGA---AGTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
29528 TTATGGCTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
639 TTA--G--TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
29593 CTCGTTTTCTATTTTTCATGA-TTTTGAAAACTTTTTACGGTTCGAGATTTTTTT-AAATTTTTT
700 CTCGTTTTCTATTTTTCATGATTTTTG-AAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTT
29656 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTGTTGGCATGCACAAAA
764 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
29720 AAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
829 AAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
29756 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
29821 ATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
**
29885 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CA------C-ACCCCCCAATCGTTGG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
* ** * * * **
29941 AACCCGAATTTCGTCGGTCAGGATC-TCCGAGATGCTCTGGCGATGGTGCCCCAAGCGAAAAAAA
196 AACCCCAATGCCGCCGATCAGGTTCTTCC--GATG--CT--CGATGGTGCCCCGGGCGAAAAAAA
* * * * * ** *
30005 ATGCGGCACCAACACATGCCTGAGCCCAGCATGTGCACCTGTAACCCTCAGTCCAGTCCGAT-CT
255 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGCT
* * * * * * *
30069 TAAACTGGGAATGAACTTCGTATGACTAAGTCAACCCACGAAATGAGCGTGCGAGCGCTTAGCCG
320 TAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCG
* * * * * * * *
30134 ACCAGAGGGGCAGGATGCACAAGCCGGGGATCGGCTGGGTCCCACTCAGCGTGCTGCTGACCCTG
385 GCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTG
*** * * * * ** *
30199 CTGTTGGAACCCTCAATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACC
450 CTACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * *
30264 GACGAAACAAGCGGGCGGGCGGGTAGGCACTACGCCGGTCAGAAAGGCGCGATGCGCAAGCCGTG
515 GACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
** * *
30329 GATCGATACGGTGGTAGAAGGGTTTAGGCACATCTTCATATTTTTGCCGTGCCAATGCCATTTTT
580 GATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
* * *
30394 ATGGCTTGCAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAGGTTTCATGGCAAGATGACTC
641 A--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * * *
30459 ATTTTTTATTTCTCATGATTATTGAAACTTTTTACGGTTCGGGATTTTTTT-TAGTTTTTTCAGA
703 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGA
* * *
30523 TGGAGTTTTGG-CCCAAACTTGGTAGATGTGATCCTTGTATTTTTG-TGGCCATGCACAAAATAA
768 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG-CATGCACAAAAAAA
* * * * * *
30586 TTCAGCTGAAAACTCAAAGCGCATAGGATTCTG
832 TTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* *
30619 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTCAATGGCTACTGGCAACAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
30684 ATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA---GG--------
* * * * *
30749 AGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCAGGTGCTCACACCCCCCAG-GCC
120 -GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCC
* * * *
30813 CCCAATCACCGGAACCCCAATGCCGTCGATCAGGTTC-TCCGATG---GATTGGAGCCCCGGGCA
184 CCCAATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGA-TGGTGCCCCGGGCG
* * * * **
30874 AAAACAAAATGCCGCACCAGCACATGCTCGATCCCAGCATGTGCACCCGTAACCCTTGGTTCGGT
248 AAAA-AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCC-----TC-G-
* *
30939 TCGATTTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
305 --G----T---CT-GG--T---C--C-AATGCTTAGACAGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * * *
31004 AACCCATGAAATGAGCGTGCAGGCGCTTAGCCGACC-AGGGGGACAGGATGCGTAAGCCGAGGAT
352 AACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAAAGGGG-CAGGATGCGCAAGCCGGGGAT
** * ** * * * * *
31068 CGGTCGGGTCCCCCTTAGCGTGCTATCGATCCTACTACCGCAACCTTCGGTCCGGTCTGATCTTA
416 CGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGATCTGATCTTA
* * * * * **
31133 GACAGGGAATGAACTCTGTACGCCTAAGCCAACCGATGAAACAAGCGGGCGGGCGGGTGGGCACT
481 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACT
* *
31198 ACGCCGGCCAGAGAGGCGGGTTGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
546 ACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCAC
* * ** * *
31263 ATCTTCATATTTTTACTGTGCCAATGCCAATTTTATGGCTTGCAAATTCATACAATGGTCCCTTA
607 ATCTTCATATTTCTGCCATGCCAATGCC-ATTTT-TAG-TTGTAAATTCATACAATGGTCCCTTA
31328 AGCCTTCATGTGAAGTTTCATGGCAAGACGA--C----TC-A-TTTTC-TG-TTTTT----C---
669 AGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTT
* * * *
31376 --A-----C--GA--TTTTTAAAACTTTTTCAGAAAGAGTTTTGGTCCCAAACTT--T--ATGTG
734 TTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
31426 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATGTT
799 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTT
31491 G
864 G
*
31492 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * *
31557 ATCTCAAATGCTCTTTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAGAGATAAGGGGCCAATAT
66 ATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * * *** ** * *
31622 AAGGGCCAAGTACCAGCATCCATCACACATCATATGCGCACA-CCCCCC-A-ATGCCGTTGGTCA
130 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCG-CC
** * * *
31684 GG---TTC--T-CCGGCGATC-----CTT----TG-GCGATGGAGCCCCGGGCGAAAAAAAAGT-
194 GGAACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAA-TA
* ** * * ** *
31732 -GGCACCAGCACATGCCCGAGCCCAGTATGTGCACCTGCAACCCTTGATCCAGTCCGAT-CTTAG
258 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGCTTAG
** * * * * * **
31795 ATTGGTAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGC-CTAGTCGAA
323 ACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTC-AGCCGGC
* * * * * * * *
31859 CAGAGGGGCAGGATGCGTAAGCCAGGGATCGACTGGGTCCCCCTCTGTGTGCTGTCAATCCTGCT
387 CAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCT
* ** * * * *
31924 GCTACAGCCCTCAATCCGATCTGATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
452 ACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
31989 CGAAACGAGCGGGCGGGC--G--GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
517 CGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
* *
32050 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTATG
582 TCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT-TA
32115 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA-ACGACTCGTT
642 G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* *
32179 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTCGAGATTTTTTTTAAAATTTTTTCAGAA
706 TTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TTCGGGA-TTTTTTTAAAATTTTTTCAGAA
*
32244 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
769 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
32309 CAGCTAAAAACTCGAAGTGTACAGGATTTTG
834 CAGCTAAAAACTCGAAGTGTACAGGATTTTG
32340 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
32405 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * *
32470 AGGGCCAAGTAACGGCAACCATCGCACATCATGTGCG--CA-CCCCCCG--CCCCCAATCG-TGG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
*
32529 AA-CCCAATGCCG--G-TCAGGTTC-TCCG--G--CGATGGTG-CCCTGGCG-AAAAAAAT--GG
196 AACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATACGG
* *
32581 CA-C--CACATG-CCGAGCCCAGCAT-TGCAGC---AA-CCTCGAGTCTGAGT-TAGATGAATAA
261 CACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCG-GTCTG-GTCCA-ATG-----
* * ** **
32636 CTCTTATGAC-TGGAATGAACTCCGTATG-CTAAGTCAACCCACGAAACGAATG-GCGGGCGTTC
318 --CTTA-GACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTC
* * * ** *
32698 AAGTCAGCCAAA-GGGCAGGATGCGCAAGCC-AGGATC-ATTGGG-----CT--TCG-G--GCC-
380 -AGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCG
** * *
32749 ATGATGCTTA---CAA-GCT-AG---G-TCTGCAT-TT-GACT-GG-A-GAACTCC-AATTGCCT
444 ATCCTGC-TACCGCAACCCTCAGTCTGATCTG-ATCTTAGACTGGGAATGAACTCCGTA-TGCCT
* * * *
32799 AAGCCAACCTGATCGAATCGAGCGGG-TGGC--G--GGCACTA-GTCGG-C-TAGAGG-GGGATG
506 AAGCCAACC-GA-CGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATG
* *
32855 CGCAAGCCGTGGATCGATAGGTGGTAGTGGG-TTA-GCA-ATCTTCATATTTCTACCATGCCAAT
569 CGCAAGCCGTGGATCGA-A-GTGGTGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
*
32917 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCG
632 GCCATTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * * * *
32982 AGACGACTCGTTTTTTATTTTTCACGATTTTTTAAACTTTTTACAGTTCAGGATTTTTTTAAAAT
694 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAAT
* * * ** **
33047 TTTGTCCA-AA-AATGTTTTGGCCCTAAACTTCATAGATTTGATCCTTGTATTTTTGTTGGCATG
759 TTT-TTCAGAAGGA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
33110 CACAAAAACATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
822 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* *
33153 TGACCATTTGAAAAATGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
33218 ATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * * *
33283 AGGTCCAAGTACCGGCACCCATCGCACATCATGTGCGCACACCCTCCCG-TCCCCCAATCGTCGA
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
* * * ** **
33347 AACCCCAATGCTGTCGGTCAGGTTC-TCCG--G-T-GATGGTGCCCCATGCGAAAAAAAATGTGG
196 AACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATACGG
* * * * ** ** * *
33407 CACCAGCACATGCCTGAGCCAAGCATTTGCTCCTGCAACCCTCAATCTGGTCTAAT-CTTAGACT
261 CACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGCTTAGACA
* * * * * * ** *
33471 GGGAATGAACTTCGTATGCCTAAGTCAAACCACGAAACGACCATGCGGGCGCTCAGTTGGCCAGA
326 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAAA
** * * ** *
33536 GGGGCAGGATGCATAAACCGGGGATCGATCGGGTCCCTTTCAACGTGCTGCCGATCCTGCTACCG
391 GGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCTACCG
* * *
33601 CAACCCTTAGT-TCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCGAACCGACGA
456 CAACCCTCAGTCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * * * *
33665 AACGAACTGGCGGGTGGGC-GAGCACTACGTCGGCTAGAGAGGTGGGATGTGTAAGCCGTGGATC
520 AACGAGCGGGCGGGCGGGCAG-GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* *
33729 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGTCATTTTTATGG
584 GA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA--G
** *
33794 CTTGTAAATTCATACGGTGGTCCCTTCAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
643 -TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * * * *
33859 TCTATTTTTCATAATTTTTTATACTTTTTACGATTTGGGATTTTTTTAAAATTTGTTCAGAAGGG
707 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGA
33924 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
772 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
*
33989 CTAAAAACTCAAAGTGTACAGGA-TTTG
837 CTAAAAACTCGAAGTGTACAGGATTTTG
*
34016 TGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * **
34081 ATCTCAAATGCTCATTAAGGGAGTGTGAGTTCTCGAGGTTTCATGAGGGATAGGGGGTGAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * *
34146 AAGGCCAAGTACCAGCACCTATCGCACATCATGTGCGCACA-CCCCCCGCCCCCCCAATCGTCGG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
* * * *
34210 AACCCCAATGCCGTCGGTCAAGTTC-TCCG--G-T-GATGGTGCCCCGGGCGAAAAAAAATATGG
196 AACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATACGG
* * ** * ** *
34270 TACCAGCACATGCCCAAGCCCAGCATGTGCACCTGCAACCCTCGGTCCGGTCTGAT-CTTAGACT
261 CACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGCTTAGACA
* * * * * *
34334 GGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAACGTGCGGGCGCTCAACCGGCCAGA
326 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAAA
* * ** * * * * *
34399 GGGGCAGGATGTGCAAGTCGGGGATCGATTGAGTCCCACTCAGCGTGCTGTCAATCCTGCTACTG
391 GGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCTACCG
* * * * * * * * ** *
34464 CGATCCTCA-TTTCAGTTTGGTCTTAGACTGGGAATGAACTCCGTATCCCTAAACCAACTAAAGA
456 CAACCCTCAGTCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
34528 AACGAGCGGGCGGGCGAGCGGGCACTACACCGGTCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
520 AACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
*
34593 ATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATGGC
585 A-A-G-TGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA--G-
* *
34658 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGAGAAGTTTCCA-GGCAACACGACTCGTTT
643 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT-CATGGCAAGACGACTCGTTT
* *
34722 TCTATTTTTCATGATTTTTGAAACTTTTTACCGTTCGGGATTTTTTTAAAAATTTTTCA-AATGG
707 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAA-GG
* ** * *
34786 ATTTTTGGCCGTAAATTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
771 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
34851 GCTAAAAACTCGAAGTGTACAGGATTTTG
836 GCTAAAAACTCGAAGTGTACAGGATTTTG
* *
34880 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGACTACTGGCAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
34945 ATCTCAAATGCTCTTTAAGGGGGGGTGAGTTCTCGATGTTTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* *
35010 AGGGCCAAGTACCAGCACCCATCGTA-ATTCATGTGCGCACA-CCCCCCGGCCCCCCAAT-GCC-
131 AGGGCCAAGTACCAGCACCCATCGCACA-TCATGTGCGCACACCCCCCCGACCCCCCAATCGCCG
* * *
35071 G--------T--CG--G-TCAGGTTC-T-C--TGGT-GATGGTGCCCCAGGCGAAAAAAAATGCG
195 GAACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATACG
* * * * *
35118 GCACCAGCACATGCCCAAGCCTAGCATGTGCACCCACAATCCTCGGTCTGGTCTGATCTTAGAAT
260 GCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTC----C----AAT
* *
35183 GGGAATGAACTACGTATGCTTAGACTTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
317 --G-CT----TA-G-A--C--AG----GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATG
* * * * * *
35248 AGCGTGCTGGCGCTCAGTCGGCTAGAGGGGCAGGATGCGCAAGTCGGGGATC-ACCCGGGT-CCC
365 AGCGTGCGGGCACTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCC
* * * * * *
35311 CTCTGCATGCTGCTGATCCTGCTACCGCAACCCTCAGTCTGGA-CCGGTCTTAGATTGGGAATGA
429 CTCAGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCT-GATCTGATCTTAGACTGGGAATGA
** ** *
35375 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCGGGTGGGCACTACGTCGGCCAGA
493 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGA
35440 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
558 GAGGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTT
*
35505 CTACCA-GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
619 CTGCCATGCCAATGCCATTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
*
35569 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
681 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
*
35634 ATTTTTTT-AAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
746 ATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
35698 TT-TT-GCATGCACAAAAAAATTCAGCT-AAAACTCGAAGTGTACAGGATTTTG
811 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
*
35749 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
35814 ATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTC-AGGTTTGATGAGGGATTAGGGGGCCAATAT
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA-TAGGGGGCCAATAT
* * * *
35877 AAGGGCCAAGTACCAGCACCCAT----CAT--T-AGCGCACA-CCCCTCAAGCCCCCCAATCGTC
130 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGA-CCCCCCAATCGCC
* * * * *
35934 GAAACCCCAATGCTGCTTG-TTAGGTTC-TCCGA----CGATAGTGCCCCGGGCG-AAAAAAATA
194 GGAACCCCAATGCCGC-CGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATA
*** * * * *** ** * *
35992 CGGCACCAGCACATGTTTGAGCCTAACATTTGCACCCGCAACCCTCAATCCGGTCCGAT-CTTAG
258 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGCTTAG
* * * * * * *
36056 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCCACGAAACGAGCGTGCGGGCGCTGAG-TGCAC
323 ACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCG-GC
* * * * * ** * *
36120 CAGAGGGGCAGGATGCACAAGCCGAGGATCGATCGGGTCTCCCTTTGCGTGCTGTCGATCCTACT
387 CAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCT
* * * ** * *
36185 ACCGCAAGCCTC-GATCTGGTCCGATCTTAGACTGGGAATGAACTCTATATGACTAAGCCAACTG
452 ACCGCAACCCTCAG-TCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * *
36249 ATGAAACGAGCGGGCGGGCGGGCTGGCACTACGCCGGCCAGAGAGGCGGGATGCCCAAGCCGCGG
516 ACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
* * *
36314 ATTGATAGTGTGGTAGGTGGGTTTGGGCCCATCTTCATATTTCTGCCATGCCAATGCCATTTTTA
581 ATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA
*
36379 TGGCTTGTAAATTCATACAATGGTCCCTTGAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
642 --G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * *
36444 TTTTCTATTTTTCATGATTTTTGAAACGTTTTACGGTTCGAGATTTTTTTAAATTTTTTTTGAGA
704 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAA-ATTTTTTCAGA
* * * * *
36509 ACGAGTTTTGGCCCCAAACTTGGTAAACATAATCCTTGTATTTTTGTGGGCATGCACAAAAAAAT
768 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
36574 TCAGCTAAAAACTGGAAGTGTACAGGATTTTG
833 TCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* * * *
36606 TGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTCAATGGCTACTAGCAGCAAACCTATAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * * *
36671 ATCTTAAATGCTCTTTAAGGGGGTGTGAGTTTTAGAGGTTTGAAGAGGGATAGGGGACCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * **
36736 AGGGCCAAGTAGCAACACTCATCGCACATCATGTGCGCACACCCCCCCGGCCCCTGCCAATCATC
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCC--CCAATCGCC
** * * * * * * *
36801 AAAACCCGAATGCCGTCGGTCATGTTCTCCGACGATAGTCCGACGATGGTGCCCCGGGCGAAAAT
194 GGAACCCCAATGCCGCCGATCAGGTTCTTC--CGAT-G--C-TCGATGGTGCCCCGGGCGAAAAA
* * * * ** * ***
36866 AAATGCGACACCAGCACCTGCCCGAGCCCAGCATGCGCATCC-GCAACCCTCGATCTGGTTTGA-
253 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCA-CCTATAACCCTCGGTCTGGTCCAAT
* * * * * *
36929 GCTTAGATTA-GGAATGAACTCCGTATGCCTAAATTAACCCATGAAACGAGCGTGCGGGCGCTCA
317 GCTTAGA-CAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCA
* * * * * *
36993 GCCGGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCGATCGGGTCCTCCTCAGCGTGCTACTGAT
381 GCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGAT
* * * ** *
37058 CCTGCTACCACAACCCTC-GATTTGGTCCAATCTTAGACTGGGAATGAACTCAGTATGCCTAAGC
446 CCTGCTACCGCAACCCTCAG-TCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
37122 CAATCGACGAAACGAGTGGGCGGGCAGGCGGGCACTATGCCGGCCAGAGAGGCGGGATGCGCAAG
510 CAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* * * *
37187 CCATGGATAGATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCA
575 CCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
**
37252 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCACAAGAC
636 TTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
** * ** *
37317 GACTCGTTTTCTATTTTTCACAATTTTTAAAACTTTTTACGGTTCCAGATTTTTTTTAAATTTTT
698 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTT
* * * * *
37382 TTAGAAGGATTTTTGGCCCCAAACTTGGTAGACGCGTTCCTTGTATTTTTGTTGGCATGCATAAA
763 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
37447 AAAATTCAGCTAAAAAATCGAAGTGTACAGGATTTTG
828 AAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* *
37484 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGCAAACATGTAAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
37549 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGGTGAGGGATAGGGGGCC-ATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * *
37613 AGGGCCAACTACCAACACCCATCGCACATCATGTGCGCACA-TCCCCCGGCCCCTGCCAATCGTC
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCC--CCAATCGCC
** * * * *
37677 GGAA-CCCAATGCCATCGATCAGGTTCTCCGACGATGGTCCGGTGATAGTGCCCCGAGCGAAAAA
194 GGAACCCCAATGCCGCCGATCAGGTTCTTC--CGATGCT-C---GATGGTGCCCCGGGCGAAAAA
* * * * ** **
37741 AAATGCGACACCAGCACCT-CCCGAGCCCAACATGTGCACCTGCAACCCTCGGTCTGGTCTGAT-
253 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATG
** * * * *
37804 CTTAGATTGGGAATGAACTCCGTATGCCTATGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
318 CTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
* * * ** * *
37869 CGGCCAGAGGGGCAAGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCAGCGTGCTACTGATCC
383 CGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCC
* * *
37934 TGCTGCCGCAACCCTCGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
448 TGCTACCGCAACCCTCAGTCTGATCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
37998 ACCGATGAAATGAGCGGGC-GG-GTG--GGCACTACGCCGGCCAGAGAGGCAGGATGCGCAAGCT
512 ACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
38059 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
577 GTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* **
38124 TTTATGGCTTGTAAATTCATACAACGGTCCCGAAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
638 TTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
38189 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTTGGGATTTTTTTAAATTTTTTTG
700 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTC
* * *
38254 AGAAGGTGTTTTGGACCCAAACTTGGTAAACGTGATCCTTGTATTTTT-TTGGGCATGCACAAAA
765 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAA
* *
38318 AAATTTCAGCTAAAAACTGGAAGTGTATAGGATTTTG
829 AAA-TTCAGCTAAAAACTCGAAGTGTACAGGATTTTG
* * * * *
38355 TGACCATTTGAAAAAATTGTCCCCATTTAAGACACTTTAATGGCAACTGCCAGCAAACCTGTCAA
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * *
38420 ATCTCAAGTGCTCTTTAAGGTGGTGTGAGTTCTCGAGGATTGATGAGGGATAGGGGGCCAATATA
66 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * **
38485 AGGG-CAAGTACCACCACCCATCGCACGTCATGTTCGCACA------C--CCTCCCAATCGTTGG
131 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
* * * * *
38541 AACCCCAATGCTGCCGGTCAGGTTCTTCGACGATGCTCCGACGATAGTGCCCCAGGTGAAAAAAA
196 AACCCCAATGCCGCCGATCAGGTTCTTC--CGATGCT----CGATGGTGCCCCGGGCGAAAAAAA
** * * * *
38606 ATGTGGCACCAGCACATGCTCGAGCCCAGTATGTGCTCCTGTAACCCTCGGTCTGGTCCGATTTG
255 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGT-C------
* * * **
38671 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATGCCTAAGTTAACCCATA
313 ---C---------A------ATGCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * *
38736 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATC-AGTCGGG
360 AAATGAGCGTGCGGGCACTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGA-CCGGG
* * * * * * *
38800 TCCCCCTCAGAGTGCTGCCGATCCTGCTGCCACAACCCTTAGTCCGGTCTGATCTTAGATTGGGA
424 TCCCCCTCAGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGA
* * * * **
38865 ATGAACTCCGTATACCTAAGCCAACCGATGAAATGAGCGGGCGGGCGGGCGGGCACTACGCTAGC
489 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGC
* * * *
38930 CAGAGGGGCGGGATGCGCAAGCCATGGATCGATAGGGTCGTAGGTGAGTTTAGGCACATCTTCAT
554 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCAT
*
38995 ATTTCTACCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
615 ATTTCTGCCATGCCAATGCCATTTTTA--G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * *
39060 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTGGAAACTCTTTACGGTT
677 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT
* * **
39125 CGAGA-TTTTTTAAAATTTTTTCAGAAGGATTTTTCACCCCAAACTTGGTAGACGTGATCCTTGT
742 CGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * *
39189 ATTTTTGTTGGCATGCACAAAATAATTTCAGGCTAAAATCTCAAAGTGTACAGGGATTTTGG
807 ATTTTTGTTGGCATGCACAAAA-AAATTCA-GCTAAAAACTCGAAGTGTACA-GGATTTT-G
*
39251 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC-TTATATGGGCTACTGGTAGCAAACCTTGT
1 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA-AT-GGCTACTGGCAGCAAACC-TGT
*
39315 AAAATCTCAAATGCTTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCATG-GGGATCAGGGGGCCA
63 AAAATCTCAAATGC-TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT-AGGGGGCCA
* * *
39379 ATATGAGGGCCAATGTACCAGCACCCATCTCACATCATGTGTG--CA-CCCCCCGACCCCCCCAA
126 ATATAAGGGCCAA-GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGA-CCCCCCAA
* * * * *
39441 TCGTCGGAACCTCAATGCCGTCGGTTAGGTTC-TCCGA----CGATGGTGCCCCGGGCGAAAAAA
189 TCGCCGGAACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAA
** * * * * * ** * **
39501 AATGTGGCAGCAGAAAATGCCCTAGCCTAGCATGTGCACCTGCAACCCTCAGTCTGGTCTGATG-
254 AATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGC
* * ** * * * *
39565 TTAGA-ATTGGAATGAATTTTGTATGCCTAAGTCAACCCACGAAATAAGCGTACAGGCACTCAAC
319 TTAGACA-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
* ** *
39629 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCAGCGTGCTGTCGATCC
383 CGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCC
** * * ** * *
39694 TGCGGCCGCAACCCTCTGTC-CAGTCCAATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCCA
448 TGCTACCGCAACCCTCAGTCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *** * * * *
39758 ACCGATGAAATGGGTACGTGGGCGGGCGGGAACTACGCCAGCCAGAGAGGCGGGATGCGCAAGCC
512 ACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
39823 GTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGTCAATGCCATT
577 GTGGATCGA-A--GTGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA--
* *
39888 TTTTTGGCTTGTAGATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
636 TTTTTAG-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
39953 CTCATTTT
700 CTCGTTTT
39961 AAATTTTTTC
Statistics
Matches: 16115, Mismatches: 1947, Indels: 1676
0.82 0.10 0.08
Matches are distributed among these distances:
752 7 0.00
753 111 0.01
754 250 0.02
755 4 0.00
756 6 0.00
758 1 0.00
759 1 0.00
761 1 0.00
762 1 0.00
764 1 0.00
765 2 0.00
766 1 0.00
767 5 0.00
768 2 0.00
771 2 0.00
775 2 0.00
776 20 0.00
777 1 0.00
778 9 0.00
779 3 0.00
780 6 0.00
781 4 0.00
782 14 0.00
783 7 0.00
784 2 0.00
785 5 0.00
787 8 0.00
788 4 0.00
789 6 0.00
790 2 0.00
795 3 0.00
797 1 0.00
798 4 0.00
799 9 0.00
800 3 0.00
801 8 0.00
802 7 0.00
804 1 0.00
805 1 0.00
807 2 0.00
808 4 0.00
809 8 0.00
810 2 0.00
811 11 0.00
812 2 0.00
813 298 0.02
814 69 0.00
815 109 0.01
816 106 0.01
817 19 0.00
818 62 0.00
819 16 0.00
820 181 0.01
821 33 0.00
822 53 0.00
823 37 0.00
824 38 0.00
825 31 0.00
826 46 0.00
827 32 0.00
828 28 0.00
829 28 0.00
830 26 0.00
831 6 0.00
833 12 0.00
834 47 0.00
835 9 0.00
836 3 0.00
837 4 0.00
838 5 0.00
839 12 0.00
840 10 0.00
841 15 0.00
842 8 0.00
843 32 0.00
844 56 0.00
845 21 0.00
846 64 0.00
847 125 0.01
848 201 0.01
849 99 0.01
850 114 0.01
851 188 0.01
852 149 0.01
853 12 0.00
854 53 0.00
855 16 0.00
856 29 0.00
857 106 0.01
858 53 0.00
859 43 0.00
860 91 0.01
861 47 0.00
862 632 0.04
863 1729 0.11
864 931 0.06
865 89 0.01
866 15 0.00
867 125 0.01
868 61 0.00
869 146 0.01
870 682 0.04
871 209 0.01
872 136 0.01
873 398 0.02
874 601 0.04
875 437 0.03
876 434 0.03
877 254 0.02
878 793 0.05
879 507 0.03
880 539 0.03
881 15 0.00
882 59 0.00
883 33 0.00
884 63 0.00
885 25 0.00
886 217 0.01
887 47 0.00
888 113 0.01
889 363 0.02
890 469 0.03
891 4 0.00
892 7 0.00
893 79 0.00
894 263 0.02
895 19 0.00
896 108 0.01
897 106 0.01
898 255 0.02
899 347 0.02
900 626 0.04
901 66 0.00
902 97 0.01
903 448 0.03
904 55 0.00
905 24 0.00
906 8 0.00
907 57 0.00
908 7 0.00
910 17 0.00
912 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (864 bp):
TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCAATCGCCGG
AACCCCAATGCCGCCGATCAGGTTCTTCCGATGCTCGATGGTGCCCCGGGCGAAAAAAAATACGG
CACCAGCACATGCCCGAGCCCAGCATGTGCACCTATAACCCTCGGTCTGGTCCAATGCTTAGACA
GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAAA
GGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTGCCGATCCTGCTACCG
CAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
ACGAGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
AGTGGTGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTAGTTGTAAAT
TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
CATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCC
CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
CGAAGTGTACAGGATTTTG
Found at i:24909 original size:26 final size:26
Alignment explanation
Indices: 24871--24923 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
24861 ATGGTTCAAT
*
24871 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
* *
24897 CTTAGACTAGGAATGAATTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
24923 C
1 C
24924 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:30755 original size:12 final size:12
Alignment explanation
Indices: 30738--30768 Score: 62
Period size: 12 Copynumber: 2.6 Consensus size: 12
30728 GAGGGATAGG
30738 GGGCCAATATAA
1 GGGCCAATATAA
30750 GGGCCAATATAA
1 GGGCCAATATAA
30762 GGGCCAA
1 GGGCCAA
30769 GTACTAGCAC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 19 1.00
ACGTcount: A:0.39, C:0.19, G:0.29, T:0.13
Consensus pattern (12 bp):
GGGCCAATATAA
Found at i:30974 original size:26 final size:26
Alignment explanation
Indices: 30945--30996 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
30935 CGGTTCGATT
*
30945 TTAGACTGGGAATGAACTTCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
30971 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
30997 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:35213 original size:26 final size:26
Alignment explanation
Indices: 35175--35227 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
35165 CTGGTCTGAT
35175 CTTAGAATGGGAATGAACTACGTATG
1 CTTAGAATGGGAATGAACTACGTATG
* * *
35201 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTACGTATG
35227 C
1 C
35228 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTACGTATG
Found at i:38700 original size:26 final size:26
Alignment explanation
Indices: 38671--38720 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
38661 GTCCGATTTG
*
38671 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGCATGCTT
38697 AGACTGGGAATGAACTCCGCATGC
1 AGACTGGGAATGAACTCCGCATGC
38721 CTAAGTTAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.22, G:0.28, T:0.22
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGCATGCTT
Found at i:40488 original size:557 final size:557
Alignment explanation
Indices: 39422--40517 Score: 1486
Period size: 557 Copynumber: 2.0 Consensus size: 557
39412 ATCATGTGTG
** * *
39422 CACCCCCCGACCCCCCCAATCGTCGGAACCTCAATGCCGTCGGTTAGGTTCTCCGACGATGGTGC
1 CACCCCCCGA-CCCCCCAATCACCGGAACCTCAATGCCGTCAGTCAGGTTCTCCGACGATGGTGC
* * * * *
39487 CCCGGGCGAAAAAAAATGTGGCAGCAGAAAATGCCCTAGCCTAGCATGTGCACCTGCAACCCTCA
65 CCCAGGCGAAAAAAAATGTGGCACCAGAAAATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCA
* * *** * *
39552 GTCTGGTCTGATGTTAGAATTGGAATGAATTTTGTATGCCTAAGTCAACCCACGAAATAAGCGTA
130 GTCTGGTCTGATGTTAGAATTGAAATGAACTCCATATGCCTAAGTCAACCCACGAAACAAGCATA
* * * * *
39617 CAGGCACTCAACCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCAGCG
195 CAGGCACTCAACCGGCCAGAAGGGCAGGATGCACAAGCCGGGGATCGATCGAGCCCCCCTCAGCG
* *
39682 TGCTGTCGATCCTGCGGCCGCAACCCTCTGTCCAGTCCAATCTTAGACTAGGAATGAACTTCGTA
260 TGCTGTCGATCCTGCGGCCGCAACCCTCGGTCCAGTCCAATCTTAGACTAGGAATGAACTCCGTA
* * *** * * *
39747 TGCCTAAGCCAACCGATGAAATGGGTACGTGGGCGGGCGGGAACTACGCCAGCCAGAGAGGCGGG
325 TGCCTAAGCCAACCAACGAAA-GCAAACGGGGGCGGGCAGGAACTACACCAGCCAGAGAGGCGGG
*
39812 ATGCGCAAGCCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
389 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
* * * *
39877 TCAATGCCATTTTTTTGGCTTGTAGATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
454 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCATGTGAAGTTTCA
39942 TGGCAAGACGACTCATTTTAAATTTTTTCGAAAGGCGCA
519 TGGCAAGACGACTCATTTTAAATTTTTTCGAAAGGCGCA
*
39981 CACCCCCCG-CCCCCCAATCACCGGAACGC-CAATGCCGTCAGTCAGGTTCTCCGGCGATGGTGC
1 CACCCCCCGACCCCCCAATCACCGGAAC-CTCAATGCCGTCAGTCAGGTTCTCCGACGATGGTGC
* * * *
40044 CCCAGGTGAAAAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCG
65 CCCAGGCGAAAAAAAATGTGGCACCAGAAAATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCA
* * *
40109 GTCTGGT-TCGATTTTAG-ATTCGAAATGAACTCCATATGCCTAAGTTAACCCACGAAACGAGCA
130 GTCTGGTCT-GATGTTAGAATT-GAAATGAACTCCATATGCCTAAGTCAACCCACGAAACAAGCA
* * ** * *
40172 TGCGGGTGCTCAGCCGGCCAGAAGGGCAGGATGCACAAGTCGGGGATCGATCGAGCCCCCCTCAG
193 TACAGGCACTCAACCGGCCAGAAGGGCAGGATGCACAAGCCGGGGATCGATCGAGCCCCCCTCAG
* * * * *
40237 CGTGCTG-CTGATCCTGCTGCCGCAACCCTGGGTCC-GATCCAATTTTAGGCTGGGAATGAACTC
258 CGTGCTGTC-GATCCTGCGGCCGCAACCCTCGGTCCAG-TCCAATCTTAGACTAGGAATGAACTC
* * * *
40300 CGTATGCCTAAGCCAACCAACGAAA-CAAACGGGCGGATGGGCAGGCACTACACCGGCTAGAGAG
321 CGTATGCCTAAGCCAACCAACGAAAGCAAACGGG-GG-CGGGCAGGAACTACACCAGCCAGAGAG
* *
40364 GCGGGATGCGCAAGCCGTGGATCTATGGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
384 GCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
40429 TCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCATGTGAAG
449 CCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCATGTGAAG
* *
40494 TTTCATGGCAAGATGACTCGTTTT
514 TTTCATGGCAAGACGACTCATTTT
40518 TTATTTTTCA
Statistics
Matches: 466, Mismatches: 64, Indels: 16
0.85 0.12 0.03
Matches are distributed among these distances:
555 4 0.01
556 8 0.02
557 444 0.95
558 1 0.00
559 9 0.02
ACGTcount: A:0.24, C:0.27, G:0.27, T:0.22
Consensus pattern (557 bp):
CACCCCCCGACCCCCCAATCACCGGAACCTCAATGCCGTCAGTCAGGTTCTCCGACGATGGTGCC
CCAGGCGAAAAAAAATGTGGCACCAGAAAATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCAG
TCTGGTCTGATGTTAGAATTGAAATGAACTCCATATGCCTAAGTCAACCCACGAAACAAGCATAC
AGGCACTCAACCGGCCAGAAGGGCAGGATGCACAAGCCGGGGATCGATCGAGCCCCCCTCAGCGT
GCTGTCGATCCTGCGGCCGCAACCCTCGGTCCAGTCCAATCTTAGACTAGGAATGAACTCCGTAT
GCCTAAGCCAACCAACGAAAGCAAACGGGGGCGGGCAGGAACTACACCAGCCAGAGAGGCGGGAT
GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCATGTGAAGTTTCATG
GCAAGACGACTCATTTTAAATTTTTTCGAAAGGCGCA
Done.