Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168016.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40915

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3500--3553
22
2.3
23
93
6
92
48
0
0
51
1.00
7119--7150
15
2.1
15
94
0
55
43
0
0
56
0.99
7193--7217
13
1.9
13
100
0
50
48
0
0
52
1.00
10072--10191
50
2.4
51
79
8
129
37
13
8
40
1.74
12174--12252
34
2.4
34
80
6
81
40
22
12
24
1.89
12213--12381
41
4.2
40
73
5
124
42
14
14
28
1.85
12624--12707
33
2.5
33
73
3
80
36
10
17
34
1.85
12662--12758
33
2.9
33
75
0
86
37
14
16
31
1.89
18094--18316
59
3.7
57
85
13
281
34
13
8
43
1.74
19317--19370
22
2.4
24
73
17
62
68
5
3
22
1.26
19763--19857
1
95.0
1
78
0
100
0
0
10
89
0.49
19776--19854
9
8.7
9
90
9
117
0
0
10
89
0.47
19763--19857
38
2.4
38
89
6
147
0
0
10
89
0.49
19763--19857
18
5.4
17
84
12
113
0
0
10
89
0.49
19763--19858
40
2.5
38
85
13
133
0
0
11
88
0.51
19910--20720
41
19.2
41
83
12
881
36
22
18
22
1.95
19910--20720
83
9.6
82
81
13
936
36
22
18
22
1.95
25826--26049
57
3.9
55
81
13
258
34
13
8
43
1.74
26075--26139
30
2.0
33
82
11
82
23
6
4
66
1.33
26599--26636
20
1.9
20
94
0
67
23
18
26
31
1.97
26697--26767
31
2.3
31
83
11
92
25
22
23
28
2.00
27209--27264
16
3.8
14
80
13
60
71
3
0
25
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28185--28235
21
2.5
21
90
3
77
47
1
1
49
1.24
28285--28328
16
2.8
16
92
0
70
20
38
15
25
1.92
28553--30122
575
2.7
571
89
4
2309
41
11
5
41
1.65
30741--30770
15
2.0
15
93
0
51
36
20
10
33
1.86
35069--35113
20
2.2
20
84
0
54
42
20
11
26
1.85
36774--36809
2
18.0
2
88
0
54
44
2
0
52
1.15
37349--37841
247
2.0
244
88
2
729
47
20
7
24
1.75
38647--38694
20
2.4
21
76
16
57
66
2
29
2
1.14

Tables:   1

The End!