Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168018.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_272, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40579

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36--87
24
2.1
25
82
3
61
57
1
1
38
1.21
3239--3283
15
3.1
15
77
6
56
64
11
2
22
1.36
3468--3507
19
2.0
20
85
4
55
65
2
0
32
1.06
4333--4357
12
2.1
12
100
0
50
64
0
0
36
0.94
8179--8238
29
2.0
31
80
6
70
40
1
0
58
1.08
14529--14573
19
2.4
19
85
7
56
73
2
2
22
1.05
19879--19924
22
2.1
22
84
4
58
21
0
4
73
1.00
24815--24848
15
2.5
13
86
13
50
52
5
35
5
1.50
30699--30827
41
3.1
41
90
1
195
24
15
24
36
1.94
31014--31097
23
3.5
23
73
14
64
21
3
1
73
1.05
31059--31110
15
3.6
15
82
10
56
26
7
0
65
1.20
31182--31221
11
3.5
12
75
25
50
27
5
5
62
1.37
31182--31243
22
3.0
21
82
17
78
24
4
3
67
1.25
31799--31843
18
2.5
18
82
7
56
60
0
40
0
0.97
32104--32141
4
9.8
4
88
5
51
26
0
0
73
0.83
32104--32145
21
1.9
21
90
9
66
26
0
0
73
0.83
32103--32259
5
30.8
5
70
20
71
19
3
3
73
1.13
32168--32259
6
15.5
6
72
15
66
14
5
2
78
1.02
32169--32229
11
5.8
10
83
9
52
13
4
1
80
0.95
32168--32259
17
5.5
17
72
20
70
14
5
2
78
1.02
32274--32603
57
5.7
57
82
4
349
43
7
12
36
1.71
32277--32601
115
2.8
114
83
2
411
44
6
12
36
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32277--32603
172
1.9
172
87
2
487
43
7
12
36
1.70
34318--34453
55
2.5
54
79
11
118
56
4
5
33
1.41
37034--37077
21
2.2
19
80
11
52
20
13
0
65
1.26
37044--37112
26
2.6
26
82
13
79
21
8
1
68
1.25
38035--38061
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!