Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168023.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_277, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40001

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1155--1181
11
2.5
11
100
0
54
25
0
7
66
1.17
3359--3916
160
3.4
164
78
9
418
33
8
7
50
1.62
3379--3913
55
9.8
53
75
12
349
32
8
8
50
1.63
3349--3916
111
5.2
108
73
12
380
33
8
7
50
1.62
3525--3916
56
7.1
56
79
9
272
33
8
6
51
1.58
3783--3870
28
3.2
28
62
19
67
28
9
5
56
1.53
4899--4948
21
2.5
20
81
9
57
66
6
8
20
1.40
4923--4956
15
2.3
15
89
0
50
70
2
8
17
1.25
4967--5023
6
9.0
6
75
17
53
75
1
7
15
1.10
4971--5022
27
1.9
27
92
0
86
75
1
7
15
1.12
5330--5496
84
2.0
85
86
3
239
34
10
16
38
1.82
6029--6115
30
2.9
30
85
0
111
34
13
8
43
1.74
6029--6133
30
3.5
30
81
2
95
36
16
6
40
1.74
8337--8389
24
2.2
26
80
16
60
35
0
5
58
1.22
11068--11107
10
4.2
9
87
9
53
5
0
12
82
0.82
11070--11107
19
2.0
20
89
5
60
5
0
13
81
0.85
12032--12080
25
2.0
25
91
0
80
51
4
4
40
1.40
12039--12095
25
2.3
24
79
8
60
45
3
8
42
1.52
12760--13073
59
5.0
63
83
12
239
33
14
7
44
1.73
12746--13095
123
2.9
122
91
5
523
33
14
8
44
1.74
12746--13095
186
1.9
182
86
10
503
33
14
8
44
1.74
13177--13251
1
75.0
1
72
0
51
85
2
8
4
0.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13201--13245
15
2.9
15
96
3
81
86
0
13
0
0.57
13665--13725
31
2.0
31
86
0
86
34
21
18
26
1.96
13740--13790
24
2.1
24
85
7
68
41
17
5
35
1.74
14161--14194
17
1.9
18
88
5
52
79
2
2
14
0.97
14224--14328
16
6.6
16
69
20
60
64
7
0
27
1.20
14519--14591
1
73.0
1
80
0
83
0
0
9
90
0.46
14511--14589
7
10.9
7
82
17
83
0
0
11
88
0.51
14519--14591
15
4.8
15
85
8
103
0
0
9
90
0.46
14511--14590
14
5.4
14
84
11
106
0
0
11
88
0.51
14598--15779
42
29.0
41
89
7
1651
37
20
18
22
1.94
14598--15757
367
3.2
365
94
2
2004
37
21
18
22
1.94
14598--15779
407
2.9
406
90
6
1842
37
20
18
22
1.94
17023--17097
22
3.7
21
77
20
88
5
17
0
77
0.95
17014--17097
30
2.8
29
80
3
96
5
17
0
76
0.99
17039--17082
8
5.2
8
82
17
54
2
13
0
84
0.73
17416--17447
10
3.2
10
95
0
55
6
3
0
90
0.53
20908--21241
60
5.5
59
86
11
428
33
13
8
44
1.76
20908--21266
120
3.0
118
87
9
485
32
12
8
45
1.73
21365--21400
17
2.2
16
90
5
54
83
0
16
0
0.65
21839--21901
31
2.0
32
84
3
83
28
23
22
25
1.99
23140--23179
17
2.4
17
78
0
53
50
0
0
50
1.00
24005--24040
18
2.0
18
88
0
54
44
0
0
55
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24751--24775
13
1.9
13
100
0
50
72
0
0
28
0.86
25078--25116
19
1.9
19
85
10
51
35
0
5
58
1.20
26361--26404
17
2.5
17
77
3
52
47
0
0
52
1.00
26561--26606
19
2.4
20
82
7
60
45
0
2
52
1.13
32169--33768
357
4.5
355
84
2
1945
36
12
15
36
1.85
32153--33762
713
2.3
712
85
2
2093
35
11
15
36
1.85
37164--37206
19
2.3
19
100
0
86
34
16
9
39
1.80

Tables:   1

The End!