Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167827.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_10, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 24162007
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 47000 characters in sequence are not A, C, G, or T
File 75 of 131
Found at i:14011140 original size:26 final size:26
Alignment explanation
Indices: 14011102--14011154 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14011092 CCCGTTTGAT
*
14011102 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14011128 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14011154 C
1 C
14011155 CTAAACCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14011419 original size:729 final size:723
Alignment explanation
Indices: 14009693--14011876 Score: 2878
Period size: 730 Copynumber: 3.0 Consensus size: 723
14009683 CCAATCCAAT
* * *
14009693 CTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGC-GG-A-----CGGGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAACGAGCGGGCAGGGGGCGGGC
* * * * * * * *
14009751 GGGCAATACACCCGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGCGGGTT
66 GGGCACTACGCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGTT
* * * *
14009816 TAGGTATATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATTG-
131 TAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * *
14009880 CCCTTAAGCCTTGACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTAA
196 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * **
14009945 AACTTTTTGCTGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTATCCCCCAAACTTGGTA
261 AACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GGCCCCAAACTTGGTA
* *
14010010 GACATTATCCTTGTACTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
325 GACATGATCCTTGTA-TTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * * *
14010075 GATTTTGTGACCATTTAAAAAAAGAGTCCCCATTTCAGACACTTTAATTGCTACTGCCAGCAAAC
389 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
14010140 CTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGCC
454 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGCC
*
14010205 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACA-CCCCCCGGCCCCCCCGA
519 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGA
* *
14010269 TCACCGGAGCCCCAAT-CTGCCGGTCAGGTTCTCTGGCGATGCTCCGATGATGGTGCCCCAACGA
584 TCATCGGAGCCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCC---------G-----ACGA
* * * *
14010333 AGAAAAATATGGCACCAGCACATGCCCGAGCCCAGTATGTGCTACTGCAA-CC-C-T--CG-G--
635 AGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTG-TTCCGCAACCCTCGTCCCGTGAT
14010390 --T---CT-GG--T---C-CG-AT-
699 CTTAGACTAGGAATGAACTCGTATG
* * * *
14010401 CTTAGACTGGGAATGAACTCCGTATGCCTAACCCAACCGACAAAACGAGCGTGC-GGGCGG-GCG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAACGAGCGGGCAGGG-GGCGGG
* *
14010464 CGGGCACTACGTCGGCCAGAGAGACGGGATAAGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGT
65 CGGGCACTACGCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGT
*
14010529 TTAGGCACATCTTCATATTT-TCACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTAGGCACATCTTCATATTTCT-GCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
14010593 GTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
*
14010658 GAAACTCTTTGCGGTTCGAGATTTTTTAAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
259 GAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
*
14010722 AGACATGATCCTTGTATTTCTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
324 AGACATGATCCTTGTATTT-TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
14010787 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAGTGGCTACTGGTAGCAAA
388 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
14010852 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGC
453 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAG-GGG
* *
14010917 CCAATATATGGGCCAAGTACCAGCATCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCCC
517 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
* * *
14010981 GATCATCGGAGGCCCAATGCCGTCGGTCAGGTTCTCTGGCGATGCTCCGACGAAGAAAAATGCGG
582 GATCATCGGAGCCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGAAGAAAAATGTGG
14011046 CACCAGCACATGCCCGAGCCCAGCATGTGTTGCCGCAACCCTCAGTCCCGTTTGATCTTAGACTA
647 CACCAGCACATGCCCGAGCCCAGCATGTGTT-CCGCAACCCTC-GTCCCG--TGATCTTAGACTA
14011111 GGAATGAACTTCGTATG
708 GGAATGAAC-TCGTATG
14011128 CTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAACGAGCGGGCAGGTGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAACGAGCGGGCAGG-GGGCGGG
* * *
14011193 CGGGCACTACGCCGGCCAGAGAGGCGGGATACGCAAGTCGTGGATTGATAAGCTGGTAGGTGGGT
65 CGGGCACTACGCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGT
* *
14011258 TTAGGCACATCTTCGTATTTCTGCGTGCCAATGCCAATTTTATGGCTTGTAAATTCATACAATGG
130 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * * ** *
14011323 TCCGTTAAGCCTTCACTTCAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACAAATTTTG
195 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
14011388 AAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTAGTA
260 AAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
14011453 GACGTGATGCTTGTATTTTTGTTGGCATGCACAAAAAAATTGAGCTAAAAACTCGAAGTGTACAA
325 GACATGATCCTTGTATTTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
14011518 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAAACACTTTAATGGCTACTGGCAGCAAAC
389 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
14011583 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG-GTTTCTTAAGGTTTGATGAGGGATAGGGGG
454 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG-TTCTCAAGGTTTGATGAGGGATA-GGGG
*
14011647 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGCACCCCCCCGTCGGCCCC
517 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC--CGGCCCC
* * * *
14011712 CCCGATCGTTGGAACCCCAATGCCACCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCTC
579 CCCGATCATCGGAGCCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGA---------
* *
14011777 GGTGATGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCATGTGCTTCCGTAACCCTCGGTCC
635 ----A-GAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTG-TTCCGCAACCCTC-GTCC
*
14011842 AGTCCGATCTTAGACTAGGAATGAACTCCGTATG
693 CGT--GATCTTAGACTAGGAATGAACT-CGTATG
14011876 C
1 C
14011877 CTAAGTCAAC
Statistics
Matches: 1302, Mismatches: 103, Indels: 102
0.86 0.07 0.07
Matches are distributed among these distances:
700 1 0.00
701 47 0.04
702 2 0.00
703 1 0.00
705 1 0.00
706 1 0.00
707 2 0.00
708 46 0.04
709 1 0.00
710 1 0.00
712 3 0.00
713 190 0.15
714 203 0.16
715 123 0.09
717 2 0.00
718 2 0.00
720 1 0.00
723 1 0.00
725 2 0.00
726 2 0.00
727 51 0.04
728 4 0.00
729 210 0.16
730 256 0.20
731 7 0.01
733 3 0.00
734 53 0.04
746 1 0.00
747 2 0.00
748 81 0.06
749 2 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (723 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAACGAGCGGGCAGGGGGCGGGC
GGGCACTACGCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
AACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
ACATGATCCTTGTATTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC
ATCGGAGCCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGAAGAAAAATGTGGCACC
AGCACATGCCCGAGCCCAGCATGTGTTCCGCAACCCTCGTCCCGTGATCTTAGACTAGGAATGAA
CTCGTATG
Found at i:14013668 original size:716 final size:712
Alignment explanation
Indices: 14011985--14015594 Score: 4814
Period size: 716 Copynumber: 5.1 Consensus size: 712
14011975 GAGCCTACTA
* * **
14011985 CCGCAACCCTCTGTCC-GATCTGATCTTAGACTAAGAATGAACTCCGTATGCCTAAGCCAACCGA
1 CCGCAACCCTCGGTCCAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * *
14012049 CGAAAAAATCG-GACGGACGGGTAGGCAGGCACTACGCCGACCAGAAAGACGGGATGCGCAAGCC
65 CG---AAA-CGAG-CGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
14012113 ATGGATCGATATGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
125 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG--TGCCAATGCCATTT
* * * *
14012178 TTATGGCTTGTAAATTCATACAATTGTCCCTTAACCCTTCACGTTAAGTTTCATGGCAAGACGAT
188 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14012243 TTGTTTTTTATTTTTCATGATTTTTGAAACTTTTTGCAGTTC-AGGATTTTTT-AAATTTCTTTC
253 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTT-TTT-
* *
14012306 AGAAAGAGT-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTCTTTTTGTTGGCATGCACAAAA
315 TGAAAG-GTGTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
14012370 AAAATCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-TGTCCCCATTTC
379 AAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * * *
14012434 AGACACTTTAATGGTTACTGGCAACATACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGGTGAG
444 AGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
14012499 TTCACGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGGCAAGTACCAGCACCCATCGCTCAT
509 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * * *
14012564 CATGTGCGCACACACCCTCCGG-CCCCATGATTGTCGAAACCCTAATGCCACCGGTCAGGTTCT-
574 CATGTGCGCACAC-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTC
* * * *
14012627 CTAGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACAGCACCAGCACATGCTCGAGCCC
638 CGA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
*
14012692 AGCATGTGCCG
702 AGCATGTGCTG
* * * ** * * **
14012703 CTGCAACTCTCGGTCCAGTCCGATCTTATACTGGGAATGAACTCTATATGCATAATCCAACTAAC
1 CCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
*
14012768 GAAACGAGCGGGC----GGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
66 GAAACGAGCGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* *
14012829 CGATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTTTCTGTGCCAATGGCATTTTTATGG
131 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTT-TGTGCCAATGCCATTTTTATGG
* * * *
14012894 CTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGAAAGACGACTCATTT
194 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
14012959 TCTATTTTTCACGA-TTTTCAAACCTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTGAAAGGT
259 TCTATTTTTCATGATTTTTGAAA-CTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTGAAAGGT
** * * * *
14013023 GTTTCAACCCCAAACTCGGTATACGTGATACTTGTATTTTTGTTGGCATGCAAAAAAAAAATCAG
323 GTTT-GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAG
* *
14013088 CTAAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTCCCCATTTCAGATACTT
387 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14013153 TAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAT
452 TAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
*
14013218 GTTTGATGAGGGATAGGGGGCCAATATAAGGCCCAAGTACCAGCACCCATCGCACATCATGTGCG
517 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
** * * *
14013283 CACACCCGCCCCGGCCCCCCCGATCACCGGAACCCCAACGCCGCTGGTCAGGTTCTCCGACGATG
582 CACACCC-CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATG
* *
14013348 CTCCGACGATGGTGCCCCGAGGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGC
646 CTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
14013413 TG
711 TG
* ** * *
14013415 CCGTAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAAC
1 CCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * *
14013480 GAAACGAGCGGGCGGGTGGGCGGGCACTACGCCGACCAGAGAGACAGGATGTGTAAGCCGTGGAT
66 GAAACGAGCGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
14013545 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGG
131 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-T-TGTGCCAATGCCATTTTTATGG
*
14013610 CTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
194 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * *
14013675 TCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATATTTTATAATTTTTTTCG-AAGGA
259 TCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTT-GAAAGG-
* * *
14013739 TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAG
322 TGTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAG
* * *
14013804 CTAAAAACACGAAGTGTACAAGATTTTGTGACCACTTGAAAAAAGTGTCCCCATTTCAGACAGTT
387 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * * *
14013869 TAATGGCTATTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAATGGGGTGTGAGTTCTCTAG
452 TAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* * * *
14013934 GTTTGATGAGGGATGGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCACACATCATATGCG
517 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
** ** * * ** *
14013999 CAC-CCCCCTTGGCCGTCCCGATCGTCGAAACCCCAATGTCGTCGGTCAAGTTCTCCGACGATGC
582 CACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATGC
** * * * * *
14014063 TTTGACGATGGTTCCCAG-TGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTACT
647 TCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
14014127 G
712 G
* * * * *
14014128 CCACAACCCTCGGTCCAATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAT
1 CCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * *
14014193 TAAATGAGCGGGTGGACGGATGGGCGGGCACTACGTCGGCCAGAGAAACGGGATGCGTAAGCCGT
66 GAAACGAGC--G-GG-CGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
*
14014258 GGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCTTGCCAATGCCATTTTT
127 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG--TGCCAATGCCATTTTT
* *
14014323 AGGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAGTC
190 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * *
14014388 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTCTTTTGGAA
255 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTGAAA
* * * *
14014453 GGAGTTTTGGCACTAAACTTGGTAGACGTGAT-C--GTATTTTTTTTGGCATGCACAAAAAAAAT
320 GGTG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAAT
* * *
14014515 CAGCTAAGAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCAAACA
384 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * * *
14014580 TTTTAATGGCTACTGGCAGCAAACCTAAAAAATCTCAAACGCTCTTTAAGGGGGTGTCAGTTCTT
449 CTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
14014645 GAGGTTTGATGGGGGATA-GGGGACAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
514 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * *
14014709 GCGCACACCCCCCCGGGCCCCTCGATCGTCGGAACCCCAATGCCACCGGTCAAGTTCT-C--CG-
579 GCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGA
* * *
14014770 -G-T-----GATGGCGCCCCGACGAAGAAAAATGCAGCACCAGTACATGCCCGAGCCCAGCATGT
644 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
*
14014828 GCTA
709 GCTG
** * * *
14014832 CCGCAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTTCGTATGCCTAAGCCAGCCGAC
1 CCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * *
14014897 G-AA--A-TGTGCGGGTGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
66 GAAACGAGCGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
14014958 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGG
131 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG--TGCCAATGCCATTTTTATGG
* *
14015023 CTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTT-ATTGGCAAGACGACTCCTT
194 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA-TGGCAAGACGACTCGTT
14015087 TTCTATTTTTCACT-ATTTTTGAAACTTTTTGCGGTTC-AGGATTTTTTAAAAATTTTTTT-AAA
258 TTCTATTTTTCA-TGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTT-AAAATTTTTTTGAAA
* * * * * *
14015149 GGAGATTTGGCCCCAAACTTGGTATACGTGATCCTTGTGTTTTTGTTGGCAGGTACAAAAAAATT
320 GGTG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAAT
* *
14015214 CAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACA
384 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
14015279 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
449 CTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * *
14015344 GAGGTTCGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATGATGT
514 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * **
14015409 GCACACAGCCCCCCCGACCCCCCCGATCACCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACG
579 GCGCACA-CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACG
* * * * **
14015474 ATGCCCCGGCGATGGAGCCCCTACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCTTAGCATG
643 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
14015539 TGCTG
708 TGCTG
* * * *
14015544 TCGCAACCCTTGGTCCAGTCCGATCTTGGACTAGGAATGAACTCCGTATGC
1 CCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
14015595 TTAGACTGGG
Statistics
Matches: 2539, Mismatches: 302, Indels: 108
0.86 0.10 0.04
Matches are distributed among these distances:
695 2 0.00
696 241 0.09
697 12 0.00
698 1 0.00
699 159 0.06
700 48 0.02
701 46 0.02
702 1 0.00
703 11 0.00
704 98 0.04
706 1 0.00
708 3 0.00
709 16 0.01
710 283 0.11
711 160 0.06
712 263 0.10
713 156 0.06
714 265 0.10
715 13 0.01
716 448 0.18
717 260 0.10
718 51 0.02
719 1 0.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.27
Consensus pattern (712 bp):
CCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
GAAACGAGCGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGCCAATGCCATTTTTATGGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
TATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTGAAAGGTGTT
TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAA
AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
GGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATGCTCCG
ACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
Found at i:14019313 original size:878 final size:875
Alignment explanation
Indices: 14016435--14022473 Score: 7329
Period size: 878 Copynumber: 6.9 Consensus size: 875
14016425 CATGTGCTGT
* * * *
14016435 CGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTATGCCAACCGACG
1 CGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * *
14016500 AAAC--G-A-GCGGGC-GG-GCGGGCACTACACCGGCCAGAGAGACGGAAAGCGCGAGCCGTGGA
66 AAACGAGCAGGCGGGCGGGAGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * * * *
14016559 TCGATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTCTTCTTGTCAATGCAATTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
14016624 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* *
14016689 TTCTATTTTTCATGATTTTTGAAACTTTTTGCGATTCGGGATCTTTTAAAATTTTTTTTGGAAGG
261 TTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTTGGAAGG
* * *
14016754 AGTTTTGACCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCCCAAAAATAATTC
325 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATTC
* *
14016819 AGCCAACAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
389 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
14016884 TTTAATGACTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTGAAGGAGTGTGAGTTCTCG
454 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTCG
* * * *
14016949 AGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGTAGCCATCACACATCATGTG
518 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * ** * * * *
14017014 CGCACA---CC-C--CCCC-CCAATCACCGAAACCTTAATACCGTCGGTCAGGTTCTCCAGCGAT
583 CGCACACCCCCTCGGCCCCTCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGAT
* * * * * *
14017072 GCTCTGGCAATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG-CTCGAGCCTAGCATGT
648 GCTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCT-GAGCCCAGCATGT
* * * *
14017136 GCTGCCGCAACCCTCGGTCCAGTCCGATCTTGGACTAGGAATGAACTCCGTATGCCTAAGTCAAC
712 GCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* ** * * * * *
14017201 CCACGACATTAGCATGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATTGGT
777 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGGGGA-TCGA
* * * * *
14017266 CC-GGTCCCCCTTTGCGTGCCACCGATCTTGCTGC
841 CCGGGTCCCCCTCTACGTGCTACCGATCCTGCTAC
* * * *
14017300 CGCAACCCTCGATCTGGTATGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG
1 CGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * *
14017365 AAA--TG-A-GCGGGC----G--GGCACTTCGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGAA
66 AAACGAGCAGGCGGGCGGGAGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
*
14017420 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTGCTGCATGCCAATGCCATTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* * *
14017485 GCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGATGACTCATT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
** * * *
14017550 TTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCAGG-TTTTCTTAAAATTTTTTCGGAAGG
261 TTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTT-TTAAAATTTTTTTGGAAGG
* *
14017614 AGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAGTCA
325 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* ** *
14017679 GCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCTTATTTTAGACACT
390 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
14017744 TTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
455 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGA
* * * * * *
14017809 GTTTTCATGAGGGATAGGGAGCCAATATAGGGGCCAAGTACGAGCACCCATCGCACATTATGTGC
519 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * **
14017874 GCACACCCCCT-GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
584 GCACACCCCCTCGGCCCCTCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATG
* * * *
14017938 CTCTGACGATGGAGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
649 CTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGTGC
* * * *
14018003 TTCCATAACCCTCGGTCCGGTCCGATCTTATACTGGGAATGAACTCCGTATG-CTTAG---A--C
714 TGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
** * * * * * * * * **
14018062 TGGGAATGAAC-T-C---CATCTCAGCCGGCCATAGGGGCGGGATGCACAAGCTGGGGATCGGTC
779 ACGAAACGAGCGTGCGGGC-GCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGGGGATCGACC
* * * * * *
14018122 GAGTCCCCCTCTGCGTGGTGCCGATCCTACTGC
843 GGGTCCCCCTCTACGTGCTACCGATCCTGCTAC
* * * * * * *
14018155 CGTAACCCACGGTCT-AGTCTGATCTTAGACTAGGAATAAACTTCGTATGCCTAATCCAACCGAT
1 CGCAACCCTCGGTCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * ** *
14018219 GATACGAGCAGGCGGGCGGGCAGGCAGGCATTACGTTGGCCAGAGAGACAGGATGCGCAAGCCGT
65 GAAACGAGCAGGCGGGCGGG-A-GCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
* * *
14018284 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACGTGCCAATGCCATTTTT
128 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* *
14018349 ATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTC
193 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * * *
14018414 ATTTTTTATTTTTCATGATTTTTGAAACTTTTTGCGATTCGTGATTTTTTAAACTTTTTTTGGAA
258 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAA
* * *
14018479 GGATTTTTGGGCCCAAACTTGGTAGACGTGATCGTTGTATTTTTGTTGGCATGCACAAAAAAATT
323 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* *
14018544 AAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACA
388 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* *
14018609 CTTTAATGGCTACTGGCAGCAAATCTGTAAAATCTCAAATGCTCTTTAAGGGGTTGTGACTTCTC
453 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG-TGTGAGTTCTC
** *
14018674 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAAAAGCACCCATCACACATCATGT
517 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * *
14018739 GCGCACACACCCTCAGCCCCTTCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGA
582 GCGCACACCCCCTCGGCCCCTCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGA
* *
14018804 TGCTCCGACGATGGTGCCCCGATGAAGAAAAATATGACACCAGCACATGCCTGAGCCCAGCATGT
647 TGCTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGT
* * * * * ** *
14018869 GCTGCTGCAACCCTCGGTCTGGTCCGATCTTAGAATGCGAATGAACTTAGTATGCCTAAATCAAC
712 GCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
** * * * *
14018934 CCACGAAACGAGCGTGCGGGCGCTCAATCGGCCCA-AGAAGCGAGATGCGCTAGCTGGGGATCGA
777 CCACGAAACGAGCGTGCGGGCGCTCAGCCGG-CCAGAGAGGCGGGATGCGCAAGCCGGGGATCGA
* *
14018998 CTGGGTCCCCCTCTACGTGCTATCGATCCTGCTAC
841 CCGGGTCCCCCTCTACGTGCTACCGATCCTGCTAC
* *
14019033 CGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCTACG
1 CGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
14019098 AAACGAGCAGGCGGGCAGGTGAGCAGACACTACGTCGGCCAGAGAGATGGGATGCGTAAGCCGTG
66 AAACGAGCAGGCGGGC-GG-GAGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
*
14019163 GATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
129 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * *
14019228 TGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCA
194 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
** * * **
14019293 TTTTCTATTTTTCATGATTTTCAAAACTTTTTGTGGATCGGGATTTTTTAAAATTTTTTCAGAAG
259 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAG
* *
14019358 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTGTTGGCAGGCACAAAAAAATTC
324 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* *
14019423 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA-TTCAAAAAATGTTTCCCCATTTCAGACA
389 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-GTGTCCCCATTTCAGACA
*
14019487 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTA
453 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTC
* * * * * * *
14019552 GAGGTGTGATGAGGGACAGGTGCCCAAAATCAGGGCCAAGTACCAGCACCCATTGCACATCATGT
517 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * *
14019617 GCGCACACCCCCTCGGCCCCTCCGATCGTCGAAACCCCAACGCCGCTGGTCAGGTTCTCCTGTGA
582 GCGCACACCCCCTCGGCCCCTCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGA
* * * * *
14019682 TACTCCGATGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCTAGCATGT
647 TGCTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGT
* *
14019746 GCTGCCGTAACCCTCGATCCGGTCCGATCTTAGAATGGGAATGAACTCCGTATGCTTAGACTGGG
712 GCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC-----C----
* *
14019811 AATGAACTCTGTATGCCAAAATCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
768 --T--A------A-G------TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGAG
* * * *
14019876 GCGGGATGCGCAAGCCGGGGATCAACCGGGTCCCCTTCTACATGCTATCGATCCTGCTAC
816 GCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTACCGATCCTGCTAC
* * * *
14019936 CGTAACCCTTGGT-TCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
1 CGCAACCCTCGGTCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * * * * *
14020000 GAAATGAGTGAGCGGGCAGGCGGGCGGGCGGGCACTGC-CCGACCAGAGAGATGGGATACGCAAG
65 G-AA--A-CGAGCAGGCGGGC-GG-GAGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * *
14020064 CTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTAATATTTTTGCATGCCAATGCCAT
124 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
** *
14020129 TTTTATCACATGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
189 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * *
14020194 ACTCGTTTTCTATTTTTCACGATTTTTG-AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTT
254 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTT
* * * *
14020258 CGGAAGGATTTTTTGCCCCAAACGTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
319 -GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
14020323 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTTTCCCTATTTC
383 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14020388 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATATCAAATGCTCTTTAAGGGGGTGTGAG
448 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAG
* *
14020453 TTCTAGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
512 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
14020518 CATGTGTGCCCACCCCCTCGGCCCC-CTTGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
577 CATGTGCGCACACCCCCTCGGCCCCTC-CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * * * * * *
14020582 CTGTGAAT-C-CCGATGATGGGGTCTCGGTGAAGAAAAATGCAGCACCAGCACATGCCCGTGCCC
641 CGGTG-ATGCTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCCC
* * * * *
14020645 AGTATGTGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGAATGGGAATGGACTCCGTATGCCTA
705 AGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * * *
14020710 AGTCAACCCATGAATCGAGCGTACGGGTGCTCAGCCGGCCAGA-AGGGCGGGATACGAAAGCCGA
770 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGA-GGCGGGATGCGCAAGCCGG
* *
14020774 GGATTGACCAGGTCCCCCTCT--GTG-T---G---CTGC-A-
834 GGATCGACCGGGTCCCCCTCTACGTGCTACCGATCCTGCTAC
* * * *
14020805 -GCAACCCTCGATCCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATG
1 CGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
** * * * * * * * *
14020869 AAACGAGTGGGTGGGCGGACGGGCGGGCACTGCGCCGACCAGAGAGATGGGATGTGCAAGCCATG
66 AAACGAGCAGGCGGGCGG--GAGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * * * *
14020934 GATCGATAGGTTGGTAGGTGAGTTTAGGCACATTTTAATATTTTTGCATGCCAATGCCATTTTTA
129 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* *
14020999 TCGCATGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
194 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * *
14021064 TTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAG
259 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAG
* * * *
14021129 GATTTTTTGCCCCAAACGTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAAAAATTC
324 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * * *
14021194 AGCTAAAAACTCGAATTGTACAAGATTTTATGACCATTTGAAAAAAATGTCCCCATTTCGGACAC
389 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
14021259 TTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCACTTTAAGGTGGTGTGAGTTCTCA
454 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG-GGTGTGAGTTCTCG
* * *
14021324 AGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTACAAACACCCATCGCACATCATGTG
518 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * *
14021389 CGCACACCCCCTTCGGCCCC-CCAATAGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGA
583 CGCACACCCCC-TCGGCCCCTCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGA
* * * * * *
14021453 TGCTCCTATGATGGTGCACCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGT
647 TGCTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGT
* * * * *
14021518 GCTGCCGTAACCCTCCGTCTGGTCTGATCTTAGACTGGAAATGAACTCCGTATTCCTAAGTCAAC
712 GCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * *
14021583 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCTAGACG-GGCGGGATACGTAAGCCAGGGATTGG
777 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA-GAGGCGGGATGCGCAAGCCGGGGATCGA
* *
14021647 CCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGC
841 CCGGGTCCCCCTCTACGTGCTACCGATCCTGCTAC
* * * *
14021682 CGCAACCCTCGGTCTGGTCCT-ATCTTAGACTAGGAATGAACTCCGTATGCCTAAACCAATCGAC
1 CGCAACCCTCGGTCTGAT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * *
14021746 GAAATGAGC-GAGCGGGCGGGCAGGCAGGCATTACGCCGGCCAGAGAGACAGGATGCGCAAGCCG
65 GAAACGAGCAG-GCGGGCGGG-A-GCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
14021810 TGGATCGATA-GGTGGTAGGT--G----GGCACATCTTCATATTTCTGCATGGCAATGCCATTTT
127 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
14021868 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGATGACT
192 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
14021933 CGTTCTCTATTTTTCATTG-TTTTGGAAACCTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGG
257 CGTTTTCTATTTTTCA-TGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG
* * *
14021997 AAGGAGTTTT--CCCCAAACTT-GTGGATGTGATCCTTGTAGTTTTGTTGGCATGCACAAAAAAA
321 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*** * * *
14022059 AAGAGGTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGA
386 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14022124 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGTGGTGTCAGTTC
451 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG-GGTGTGAGTTC
* * * * *
14022189 TCAAGGTTCGATGATGGATAGGGGGCCAATGTAAGTGCCAAGTACCAGCACCCATCGCACATCAT
515 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
14022254 GTGCGCACA---------CCCC-CCGATCACCGGAACCCCAATGCCGCCGATCAGGTTCTTCGGC
580 GTGCGCACACCCCCTCGGCCCCTCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG----T----
* * *
14022309 GATGCTCCGGTGATGCTCCGACGATGGTGCCCCGGTGAAGAAGAATGCGGCACCAGCACATG-CT
637 --T-CTCCGGTGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCT
* * * * *
14022373 CGAGCGCAGCATGTGCTGCCATAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATAAACTCCGT
699 -GAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * *
14022438 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
763 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
14022474 GGCGGGCGGG
Statistics
Matches: 4524, Mismatches: 527, Indels: 242
0.85 0.10 0.05
Matches are distributed among these distances:
854 4 0.00
855 117 0.03
857 2 0.00
858 37 0.01
859 195 0.04
860 72 0.02
861 199 0.04
862 3 0.00
863 3 0.00
864 35 0.01
865 677 0.15
866 223 0.05
867 457 0.10
868 436 0.10
869 153 0.03
870 1 0.00
871 161 0.04
872 3 0.00
874 8 0.00
875 6 0.00
876 2 0.00
877 106 0.02
878 750 0.17
879 14 0.00
880 72 0.02
882 1 0.00
886 1 0.00
887 1 0.00
888 1 0.00
890 1 0.00
893 1 0.00
895 1 0.00
896 1 0.00
901 1 0.00
902 5 0.00
903 144 0.03
904 2 0.00
905 45 0.01
906 553 0.12
907 30 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (875 bp):
CGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
AAACGAGCAGGCGGGCGGGAGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCTCGGCCCCTCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCT
CCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGGGGATCGACCGGG
TCCCCCTCTACGTGCTACCGATCCTGCTAC
Found at i:14019803 original size:26 final size:26
Alignment explanation
Indices: 14019774--14019826 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14019764 CCGGTCCGAT
14019774 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
* *
14019800 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14019826 C
1 C
14019827 CAAAATCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:14025647 original size:26 final size:26
Alignment explanation
Indices: 14025629--14025696 Score: 127
Period size: 26 Copynumber: 2.6 Consensus size: 26
14025619 TTAGACTCGA
14025629 AATGAACTCCGTATGCTTAGATTGGG
1 AATGAACTCCGTATGCTTAGATTGGG
*
14025655 AATGAACTCTGTATGCTTAGATTGGG
1 AATGAACTCCGTATGCTTAGATTGGG
14025681 AATGAACTCCGTATGC
1 AATGAACTCCGTATGC
14025697 CTAAGTTAAC
Statistics
Matches: 40, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
26 40 1.00
ACGTcount: A:0.28, C:0.16, G:0.25, T:0.31
Consensus pattern (26 bp):
AATGAACTCCGTATGCTTAGATTGGG
Found at i:14026574 original size:26 final size:26
Alignment explanation
Indices: 14026545--14026597 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14026535 CCGATCTGAT
*
14026545 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14026571 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14026597 C
1 C
14026598 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14027455 original size:26 final size:26
Alignment explanation
Indices: 14027404--14027456 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14027394 CCGGTCTGAT
**
14027404 CTTAGACTGGGAATGAACTCTTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14027430 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14027456 C
1 C
14027457 CTAAGTCAAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14029189 original size:25 final size:26
Alignment explanation
Indices: 14029161--14029212 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14029151 CCGGTTTGAT
*
14029161 CTTAGAC-GGGAATGAATTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14029186 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14029212 C
1 C
14029213 CTAAGTCAAG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 7 0.28
26 18 0.72
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14030097 original size:26 final size:26
Alignment explanation
Indices: 14030061--14030113 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14030051 CTGATCCGAT
*
14030061 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14030087 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14030113 C
1 C
14030114 CTAAGTCAAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14031009 original size:26 final size:26
Alignment explanation
Indices: 14030973--14031025 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14030963 CTGGTCTGAT
*
14030973 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14030999 CTTAGAGTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14031025 C
1 C
14031026 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14031736 original size:898 final size:895
Alignment explanation
Indices: 14028790--14031889 Score: 4166
Period size: 912 Copynumber: 3.5 Consensus size: 895
14028780 TTTTTGAAAA
* * * *
14028790 GTGATCCTTTTATTTTTTTTTGGCATGCATAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGA
1 GTGATCCTTGTA-TTTTTGTT-GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * ** *
14028855 TTTTGTGACCATTTGAAAAAAGTTTCCCCATTTTAGTCACTTTAAAGGCTACTGGCAGCAAACCT
64 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCT
* * * * **
14028920 GAAAAATCTCAAATACTCTTTAAGGGGTGTGAGTTCTCGAGGTTCGATGAGGGATAGAAGGCCAA
129 GTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA
* * *
14028985 TATAAGGGCCAAGCACCAGCACCCAACGCACATCATGTGCGTACACCCCCCATCCGGCCCCCCCG
194 TATAAGGG-CAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC--CCGGCCCCCCCG
* *
14029050 ATCG-CTGGAACCCCAA---------T---G-----C--C---G-TCCGACGATGGTGCCTCGAT
255 ATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
* * * * *
14029091 GAAGAAAAATGTGAG-ACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTTGGTCCGG
319 GAAGAAAAATG-CAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA
**
14029155 TTTGATCTTAGAC-GGGAATGAA-TTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
383 TCCGATCTTAGACTGGGAATGAACTT-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
14029218 TCAAGCCATGAAACGAGCGTACGGGCGCTCAGTCGGCCAAAGGGACGGGATGCGCTAGCCGGGGA
447 TCAAGCCACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGG-CGGGATGCGCAAGCCGGGGA
* ** * *
14029283 TCGATCGGGTCCCCCTCTGCGTGCTGCTGATCTTGCTGCTGTAACCCTTGGTCTGATCTGATCTT
511 TCGGTCGGGTCCCCCTCTGCGTGCTGCCAATCTTGCTACTGCAACCCTTGGTCTGATCTGATCTT
* *
14029348 AGACTGGGAATAAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCAC
576 AGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCAC
* * *
14029413 TACGCCGGCCAAAGAGATGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTTGGTTTAGGCA
641 TACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
** * *
14029478 CATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCTTACAATGGTACCTTA
706 CATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * *
14029543 AGCCTTCACATGAAGTTTCATGTCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTT
771 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACCTT
* ** * * *
14029608 TTACAGTTTGGGATTTTTTAAAATTTTTTTCG-AAGGAGTTTTGGCCCCAAACATAGTAGAC
836 TTACGGTTTGGGATTTTTTAAAA-TTTTTTCGAAAGGAGTTTTGGCATC-ATCTTGGTAGAC
* *
14029669 ATGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
1 GTGATCCTTGTATTTTTGTT-GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
14029734 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGCCAGCAAACCTG
65 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTG
14029799 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA
130 TAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA
* * * * *
14029864 TATAAGGGACAAGTACCAGCACCCATCACACATCATGTGCACATAACCCCCCCGGCCCCTCTGAT
194 TATAAGGG-CAAGTACCAGCACCCATCGCACATCATGTGCGCA-CACCCCCCCGGCCCCCCCGAT
* ** * * *
14029929 CGCCGGAACCCCAATGTTGTCGGTTAGGTTCTCCGACGATGCTCCAACGATGGTGCCCCGACAAA
257 CGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
* * * *
14029994 GAAAAAAATG--GCACTAGCACATGCCCAAGCCCAGTATGTGCTGCCGTAACCCTCGGTCTGATC
322 G--AAAAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATC
*
14030057 CGATCTTAGACTGGGAATGAACTTCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCA
385 CGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* ** *
14030122 AGCCACGAAATGAGCGTACGGGCGCTCAACCGGCCAGAGAGGCAGGATGCG-AAGTCGGTCGGGC
450 AGCCACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAG-GGCGGGATGCGCAAG-C---CGGG-
* * * * *
14030186 GCTAACCGGTCGGGTCCCCCTCTCCGTGTTGTCAATCCTGCTACTGCAACCCTTGGTCTGATCTG
509 G---ATCGGTCGGGTCCCCCTCTGCGTGCTGCCAATCTTGCTACTGCAACCCTTGGTCTGATCTG
* * *
14030251 ATCTTAGACTAGGATTGAACTTCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCG
571 ATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC-
* * * *
14030316 GATGAGCACAACGCCGGCCAGAGAGACGGGATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGG
635 G--G-GCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* *
14030381 GTTTAGGTACATCTTCATATTTCTACGTCCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
697 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
14030446 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGACTTT
762 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
14030511 CAAAA-CTTTATGCGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCATTTAGGGT-
827 CAAAACCTTT-TACGGTTTGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCA-TCA---TC
**
14030574 TTGGGGGAC
887 TTGGTAGAC
* *
14030583 GTGATCCTTGTATTTTTGTTGGAGTGGACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
1 GTGATCCTTGTATTTTTGTTGCA-TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * *
14030648 TTTGTGACCATTTGAAAAAAGGGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTG
65 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTG
* * *
14030713 TAAAATCTCAAATGCTCTTTAAACGGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGGCCAA
130 TAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA
** * *
14030778 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTGCAGCCCCCTGG-CCCCCCGATC
194 TATAAGGG-CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC
* ** * *
14030842 ATCGGAACCCCAATGCCGTCAATCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAG
258 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG
** * * * * *
14030907 AAAAATGCAGCACCAGCACATGCCTGAGCTCAACATGTGCTGCCGCAACCCTCGGTCTGGTCTGA
323 AAAAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGA
* *
14030972 TCTTAGACTGGGAATGAACTTCGTATGCTTAGAGTGGGAATGAACTCCGTATGCCTAAGTCAACC
388 TCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAGC
** * * * *
14031037 CACGAAACGAGCGTGTGGTCGCTCAGTCGGCCAGAGGGTTGGGATGTGCAAGCCTGGGATCGGTC
453 CACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGG-CGGGATGCGCAAGCCGGGGATCGGTC
* * * * *
14031102 GGGCCCCCCTCTGCGTGCTGCCAATCTTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTG
517 GGGTCCCCCTCTGCGTGCTGCCAATCTTGCTACTGCAACCCTTGGTCTGATCTGATCTTAGACTG
*
14031167 GGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGTGCGGGCGGGCGGGCACTACGCC
582 GGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCC
*
14031232 GGCCAGAGAGATGGGATGCCCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
647 GGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*
14031297 CATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTT
712 CATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
14031362 CATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACAATTTTCAAAACCTTTTACGG
777 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACCTTTTACGG
*
14031427 TTTGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCATCATCTTGGTAGAC
842 TTTGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCATCATCTTGGTAGAC
* *
14031481 GTGATCCTTGTATTTTTGTTGTCACGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGAT
1 GTGATCCTTGTATTTTTGTTG-CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
14031546 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTG
65 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTG
*
14031611 TAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCAAGGTTTGATAAGGGATAGGGGGCCAA
130 TAAAATCTCAAATGCTCTTTAAGGGG-TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA
14031676 TATAAGGGCTAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATC
194 TATAAGGGC-AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC
* * * * **
14031740 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGGCGATGGTGCCTCGGTGAAG
258 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG
* * * *
14031805 AAAAATGCGGCACCAGCACATGCTCAAGCCCAGCATGTGCTGCTGCTAA-CCTCGGTCCAATCCG
323 AAAAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGC-AACCCTCGGTCCGATCCG
14031869 ATCTTAGACTGGGAATGAACT
387 ATCTTAGACTGGGAATGAACT
14031890 CCATATGCCT
Statistics
Matches: 1945, Mismatches: 213, Indels: 107
0.86 0.09 0.05
Matches are distributed among these distances:
877 24 0.01
878 131 0.07
879 90 0.05
880 1 0.00
886 1 0.00
889 1 0.00
894 1 0.00
896 1 0.00
897 14 0.01
898 359 0.18
899 5 0.00
900 76 0.04
901 316 0.16
902 16 0.01
904 5 0.00
905 112 0.06
908 111 0.06
909 4 0.00
910 7 0.00
911 13 0.01
912 421 0.22
913 13 0.01
914 221 0.11
915 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
GTGATCCTTGTATTTTTGTTGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC
GGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAA
AATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCT
TAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAGCCAC
GAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
CCCCCTCTGCGTGCTGCCAATCTTGCTACTGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAA
TGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCC
AGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
TTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACCTTTTACGGTTTG
GGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCATCATCTTGGTAGAC
Found at i:14034102 original size:26 final size:26
Alignment explanation
Indices: 14034066--14034118 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14034056 CCGGTCCGAT
*
14034066 CTTAAACTGGGAATGAACTCTGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
*
14034092 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14034118 C
1 C
14034119 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:14036600 original size:728 final size:717
Alignment explanation
Indices: 14035562--14037597 Score: 2684
Period size: 710 Copynumber: 2.8 Consensus size: 717
14035552 CTGCCAATCC
* ** * *
14035562 TGCTGCCGCAACACTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTTGGGT-CAATCTTAGACTGGGATTGAACTCCGTATGCCTAAGCCAA
* * * * * * *
14035627 CCGATGAAATGAAC--G-GGAGGGCGGGCGGGCACTACGCCGGCTAGAGAGATGAGATGCGCAAG
65 CCGATGAAACGAGCGGGTGGCGGGCGGGCGGGTACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* *
14035689 CCGTGAATCGATAGGATGGTAGGTGGGGTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
130 CCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
* *
14035754 TTTTATGGCTTGTAAATTCATACAATGGCCCCTTAAGCCTTCACGTGACGTTTCATGGCAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* ** *
14035819 ACTCCTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTC
260 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
* *
14035884 AGAAGGTGTTTTGGCCCCAAACTTGGTAGACGT-ACTCCTTGTATTTTTTTTGGCATGCACAAAA
325 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGA-TCCTTGTATTTTTTTTGGCATGCACAAAA
14035948 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTCC
389 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATT-C
*
14036013 AAACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAG
453 AAACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
14036078 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGTG-CAAGTACCAGCACCCATCACACAT
518 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACAT
* * * * * * * *
14036142 CTTGTGCGCACACCCCC-TCGGCC-CCCCTATCGTC-GGATCTCCAATGCCGTCGGTCAGGTTCT
583 CATGTGCGCACACCCCCACCGGCCTCCCCGATCGCCAGAACCT-AAATACCGTCGGTCAGGTTCT
*
14036204 CCGACGATGCTCCGGGGATGCT-CCGGT-GATAGTGCCCTGGCGAAGAAAAATGCAGCAACAGCA
647 CCGACGATGCTCCGGCGATGCTGCC--TCGATA-----------AAGAAAAATGCAGCAACAGCA
14036267 CATGCCCGAGCCCAGCATG
699 CATGCCCGAGCCCAGCATG
* * *
14036286 TGCTGCCGCAACCTTCTGTCTGGTTCAATCTTAGACTGGGATTGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGT-TGGGTCAATCTTAGACTGGGATTGAACTCCGTATGCCTAAGCCAA
* * * * * *
14036351 CTGACGAAACGAGCGGGCTGGCGGGCGGGCGGGTGCTGCGCCGGCCAGAAAGACGGGATGCGAAA
65 CCGATGAAACGAGCGGG-TGGCGGGCGGGCGGGTACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
14036416 GCCGTGGATCGATAGGGTGGGAGGTGGGTTTAGGCACATCATCATATTTCTGCATGCCAATGCCA
129 GCCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
* *
14036481 CTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAAGGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
14036546 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGATCGAGATTTTTTAAAATTTTTT
259 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
** *
14036611 TGGAAGGAGTTTTGGCCCCTAACTTGGTAGACATGATCCTTGTATTTTTTGTTGGCATGCACAAA
324 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTT-TTGGCATGCACAAA
*
14036676 AAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-TCCTCATT
388 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCC-CATT
* *
14036740 TAAGACACTTTAATGGCTACT-AGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGT
452 CAA-ACACTTTAATGGCTACTGA-CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
14036804 GAGTTGTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
515 GAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACA
14036869 CATCATGTGCGCACACCCCCACCGGCCTCCCCGATCGCCAGAACCTAAATACCGTCGGTCAGGTT
580 CATCATGTGCGCACACCCCCACCGGCCTCCCCGATCGCCAGAACCTAAATACCGTCGGTCAGGTT
* * * *
14036934 CTCCGACGATGCTCCGGCGATGGTGCCTCGATAAAGAAAAATGCGGCACCAGCACATTCCCGAGC
645 CTCCGACGATGCTCCGGCGATGCTGCCTCGATAAAGAAAAATGCAGCAACAGCACATGCCCGAGC
14036999 CCAGCATG
710 CCAGCATG
* *
14037007 TGCTGCCGCAACCCTCGGTTGGGTCTGATCTTAGAC-----TTG------GAATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTTGGGTC-AATCTTAGACTGGGATTGAACTCCGTATGCCTAAGCCAA
** *
14037061 CCGATGAAACGAGCGGGTGGGCGATCGGG-GGGTCACTACGCCGACCAGAGAGACGGGATGCGCA
65 CCGATGAAACGAGCGGGT-GGCGGGCGGGCGGGT-ACTACGCCGGCCAGAGAGACGGGATGCGCA
** * * * **
14037125 AGCATTGTATCAATAAGGTGGTACATGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
128 AGCCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
*
14037190 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGA
193 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * *
14037255 CGACTTG-TTTCTTATTTTTCATGATTTTTGAAACTTTTTGA-GGTTTGGGATATTTTAAAATAT
258 CGACTCGTTTTC-TATTTTTCATGATTTTTGAAACTTTTT-ACGGTTCGAGATTTTTTAAAATTT
* *** * ** *
14037318 TTTCAAAAGGAGTTTCAACCCCAAACTTGGTAGACATGATCCCTGTATTTTTAGTGGCTTGCACA
321 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACA
* * * * * * * * * *
14037383 AAAAAAATCAGCCAAAAATTCGAAGTGCACAAAATCTTATGACAATTTCAAAAAAGTGTCCCCAT
386 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCA-
* *
14037448 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
450 TTCAAACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
14037513 GAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCATCTCCCATCATA
515 GAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACA
*
14037578 AATCATGTGCGCACACCCCC
580 CATCATGTGCGCACACCCCC
14037598 CCCCCGATCG
Statistics
Matches: 1160, Mismatches: 128, Indels: 63
0.86 0.09 0.05
Matches are distributed among these distances:
709 205 0.18
710 277 0.24
711 1 0.00
716 3 0.00
720 5 0.00
721 63 0.05
724 65 0.06
725 2 0.00
726 1 0.00
728 265 0.23
729 170 0.15
730 39 0.03
731 6 0.01
732 52 0.04
733 6 0.01
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Consensus pattern (717 bp):
TGCTGCCGCAACCCTCGGTTGGGTCAATCTTAGACTGGGATTGAACTCCGTATGCCTAAGCCAAC
CGATGAAACGAGCGGGTGGCGGGCGGGCGGGTACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
CGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTCAAA
CACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
GTGCGCACACCCCCACCGGCCTCCCCGATCGCCAGAACCTAAATACCGTCGGTCAGGTTCTCCGA
CGATGCTCCGGCGATGCTGCCTCGATAAAGAAAAATGCAGCAACAGCACATGCCCGAGCCCAGCA
TG
Found at i:14037768 original size:26 final size:26
Alignment explanation
Indices: 14037738--14037816 Score: 79
Period size: 26 Copynumber: 3.0 Consensus size: 26
14037728 CCGATCGGAT
14037738 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
* * * * **
14037764 GTTAGATTGGGAATCAACTTTGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
*
14037790 CTTAAACT-AGGAATGAACTCCGTATG
1 CTTAGACTGA-GAATGAACTCCGTATG
14037816 C
1 C
14037817 CTAAGTCAAC
Statistics
Matches: 39, Mismatches: 13, Indels: 2
0.72 0.24 0.04
Matches are distributed among these distances:
26 39 1.00
ACGTcount: A:0.30, C:0.16, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:14039205 original size:12 final size:12
Alignment explanation
Indices: 14039188--14039213 Score: 52
Period size: 12 Copynumber: 2.2 Consensus size: 12
14039178 GGATAGGGGG
14039188 CAATATAAGGGC
1 CAATATAAGGGC
14039200 CAATATAAGGGC
1 CAATATAAGGGC
14039212 CA
1 CA
14039214 TGTACCAGCA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 14 1.00
ACGTcount: A:0.42, C:0.19, G:0.23, T:0.15
Consensus pattern (12 bp):
CAATATAAGGGC
Found at i:14039437 original size:26 final size:26
Alignment explanation
Indices: 14039401--14039451 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
14039391 TGGTCTGATC
14039401 TTAGACTGGGAATGAACTCCGCATGG
1 TTAGACTGGGAATGAACTCCGCATGG
14039427 TTAGACTGGGAATGAACTCCGCATG
1 TTAGACTGGGAATGAACTCCGCATG
14039452 CCAAAGTCAA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.29, T:0.24
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGCATGG
Found at i:14040328 original size:26 final size:26
Alignment explanation
Indices: 14040292--14040370 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
14040282 GCAGTTCGAT
*
14040292 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14040318 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14040344 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCGTATG
14040370 C
1 C
14040371 CTAAGCCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14040729 original size:924 final size:909
Alignment explanation
Indices: 14038635--14041499 Score: 3304
Period size: 924 Copynumber: 3.1 Consensus size: 909
14038625 CCAGCATGTG
* * * ** *
14038635 CTACCGCAACCCTCAGTCCGCTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACC
1 CTACCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * *
14038700 GACGAAATGAACGGGCAGACGGCCGGGTGGGTGGGCGGGCACTACGTCGGCCAGAGAGACGGGAT
66 GACG--A--AAC--G-AG-CGGAC----GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * *
14038765 GCGCAAGCCATGGATTGATAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCATGCCA
119 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGCATGCCA
** *
14038830 ATGCCTTTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
184 ATGCAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* *
14038895 CAAGACGACCCCTTTTCCATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGAGATTTTTT-AAA
249 CAAGACGACTCCTTTTCTATTTTTCATGATTTTTGAAACTTTTTGT-GTTCGAGATTTTTTAAAA
** *
14038959 TTTTTTTCAGAAGGACATTTGGCCCCAAACTTGGTAGACGTGATCCTAGTATTTTTGTTGGCATG
313 TTTTTTT-AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
14039024 CACAAAAGAAATCAGC-TAAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
377 CACAAAAGAAATCA-CTTAAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
14039088 CTATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGGAAAATCTCAAATGCTCTTTAAGGGG
441 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGG
*
14039153 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAATATAAGGGCCATGT
505 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC-----AA--G--A---
* * *
14039217 ACCAGCACCCATCACACATCATGCGCGCACACCCCACCCGGCCCCCCCGATC-ACTGGAACCCCA
558 ACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCCGG-CCCCCCGATCGTC-GGAACCCCA
* * * *
14039281 ATGCCGTCGGTCAAGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATACGACA
620 ATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCC-GTGAAGAAAAATACGGCA
* ** * **
14039346 CTAGCACATGCTCAAGCTCAACATGTGCTATCGCAA-C-C--C-TT-GA---T---CT-G---G-
684 CCAGCACATGCTTGAGCCCAACATGTGCTGCCGCAACCTCGTCGTTCGATCTTAGACTGGAATGA
* * *
14039394 --TCTG-AT-CTTAGACTGGGAATGAACTCCGCATGGTTAGACTGGGAATGAACTCCGCATGCCA
749 ACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCACATGCCA
* * * *
14039455 AAGTCAACCCAGGAAACGAGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA
814 AAGCCAACCCAGAAAACGAGGCGCTCAACCGGCCAGAAGGGCGGGATGCGCAAGCCAGGGATCGA
* * ** *
14039520 CTGGGTCCCCCTCTATGTGCTGCCAATGTTG
879 CCGAGTCCCCCTCTATGTGCTGCCAATCCTA
* *
14039551 CTACCGTAACCCTCGGTTCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
1 CTACCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * ** * *
14039616 GATGAAATGAGCGGGCGGGCTGGCGGGCACTACGCCAACCAGAGAAACGGGATGTGCAAGCCGTG
66 GACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * *
14039681 GATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTACGTGCCAATGCTATTTTTA
131 GATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGCATGCCAATGCAATTTTTA
* * *
14039746 TGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAATCT
196 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCC
* * *
14039811 TTTTCTATTTTTCATAATTTTTGAAACTTTTTGTAGTTCGGGATTTTTTAAAATTTTTTTAAAAG
261 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGT-GTTCGAGATTTTTTAAAATTTTTTTAGAAG
*
14039876 GAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAGAAATC
325 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAGAAATC
* * * *
14039941 ATTTAAAAACTCAAATTGTACACGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACAC
390 ACTT-AAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
*
14040006 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGAGAGTTCTCAA
454 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCAA
*
14040071 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCGATCGCACATCATGTGC
519 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCGCACATCATGTGC
* * * * * *
14040136 GTACACCCCCCCAGCCCTCCCGATCGTCAGAACCCCAATGCCGCCCGTCTGGTTCTCCGACGATG
584 GCACACCCCCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * *
14040201 CTCCGGCAATGGTGCCCCAGTGAAGAAAAATGCGGCACCAGCACATGCTTGAGCCCAGCATGTGC
648 CTCCGGCGATGGTGCCCC-GTGAAGAAAAATACGGCACCAGCACATGCTTGAGCCCAACATGTGC
*
14040266 TGCCACAACCCTCAGTGCAGTTCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
712 TGCCGCAA-CCTC-GT-C-GTTCGATCTTAGACT-GGAATGAACTCTGTATGCTTAGACTGGGAA
* *
14040331 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCCACGAAACGAGCGT
772 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCACATGCCAAAGCCAACCCA-GAAA--A-CG-
* * * * * *
14040396 ACGGACGCTCAGCCGGCCATAAGGGCGGGATGTGCGAGTCAGGGATCGACCGAGTCCCCCTCTGT
832 A-GG-CGCTCAACCGGCCAGAAGGGCGGGATGCGCAAGCCAGGGATCGACCGAGTCCCCCTCTAT
* *
14040461 GTGTTGCCGATCCTA
895 GTGCTGCCAATCCTA
* * * *
14040476 CTATCGTAACCCTTGGTCCGGTCCGATCTTAGACTGGGAGTGAACTCCGTATGCCTAAGCCAA-C
1 CTACCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* **
14040540 GACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCATAGAGACGAAATGCGCAAGCCGTG
66 GACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * * * * *
14040605 GATCGACAGGGTGGCAGTTGGGTTTAAGCACATCTTCATATTTCTGCTTTCCAATGAAATTTTTA
131 GATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGCATGCCAATGCAATTTTTA
* * *
14040670 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGCCAAGACGACTCG
196 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCC
* ** **
14040735 TTTTCTATTTTTCACGATTTTCAAAACATTTTTG-GTTCGAGATTTTTTAAAATTTTTTCGGAAG
261 TTTTCTATTTTTCATGATTTTTGAAAC-TTTTTGTGTTCGAGATTTTTTAAAATTTTTTTAGAAG
*
14040799 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA-AAATT
325 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAGAAA-T
* * * *
14040863 CAGCTTAAAACTCGAAGTGTACAAGATTTTGTGACCACTTGAAAAAAGTGTCCCCATTTAAGATA
389 CA-CTTAAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* *
14040928 GTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCAATGCTCTTTAAGAGGGTGTGAGTTCTC
453 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTC
* * * * * *
14040993 TAGGTTCGATAAGGGATAGGGGGCCAATATAAGGGCCAGGTACCAGCACCCATCGCACAACATGT
517 AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCGCACATCATGT
* *
14041058 GCGCACACCCCCCCGGCCCCCTCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTGCGGCAA
582 GCGCACACCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
* * * ** * * *
14041123 CGGTCCGGTGATTATGCCCCGACGAAGAAAAATACGGCACCAGCACAAGCCTGAGCCCAACATGT
646 TGCTCCGGCGATGGTGCCCCG-TGAAGAAAAATACGGCACCAGCACATGCTTGAGCCCAACATGT
* * *
14041188 GCTGCCGCAAACCTCGGTCTGGTCTAATCTTAGACTGGAATGAACTCCGTATGCTTAGACTGGGA
710 GCTGCCGC-AACCTC-GTC-GTTC-GATCTTAGACTGGAATGAACTCTGTATGCTTAGACTGGGA
* * * * * *
14041253 ATGAACTTCGTATGCCTA-A----G--TTAA--CC-CATG--AAA--CGA-GC-G--TACG-GGC
771 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCACATGCCAAAGCCAACCCAGAAAACGAGGC
* * * * * ** ** * *
14041299 ACTCAACCGGCCAGAGGGGTGGGATACGCAAGCCGGGGATCGACCTTGTCCCCCTCTGCGTACTA
836 GCTCAACCGGCCAGAAGGGCGGGATGCGCAAGCCAGGGATCGACCGAGTCCCCCTCTATGTGCTG
* *
14041364 CCAATTCTG
901 CCAATCCTA
* ** ** ** ** *
14041373 CTGCCACAACCCTCGGTTTGGTCTGATCTTAGACTAAGAATGAAGTCCGTATGCCTAAGCCAACC
1 CTACCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
14041438 GACGAAACGAGCGGGCGGGCGGGCGGGCACTATGCTGGCCAAAGAGACGGGATGCGCAAGCC
66 GACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
14041500 AAAGAGACGT
Statistics
Matches: 1680, Mismatches: 221, Indels: 114
0.83 0.11 0.06
Matches are distributed among these distances:
891 3 0.00
892 102 0.06
893 32 0.02
894 1 0.00
895 1 0.00
896 1 0.00
897 107 0.06
898 60 0.04
899 1 0.00
900 2 0.00
901 4 0.00
902 3 0.00
904 308 0.18
905 126 0.08
906 1 0.00
908 7 0.00
909 4 0.00
910 2 0.00
911 2 0.00
912 2 0.00
913 4 0.00
914 3 0.00
916 69 0.04
917 2 0.00
918 61 0.04
919 3 0.00
921 1 0.00
922 6 0.00
923 238 0.14
924 399 0.24
925 125 0.07
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (909 bp):
CTACCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGCATGCCAATGCAATTTTTA
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCC
TTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGTTCGAGATTTTTTAAAATTTTTTTAGAAGG
AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAGAAATCA
CTTAAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCAAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC
CGGCGATGGTGCCCCGTGAAGAAAAATACGGCACCAGCACATGCTTGAGCCCAACATGTGCTGCC
GCAACCTCGTCGTTCGATCTTAGACTGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCG
TATGCTTAGACTGGGAATGAACTCCACATGCCAAAGCCAACCCAGAAAACGAGGCGCTCAACCGG
CCAGAAGGGCGGGATGCGCAAGCCAGGGATCGACCGAGTCCCCCTCTATGTGCTGCCAATCCTA
Found at i:14041250 original size:25 final size:26
Alignment explanation
Indices: 14041216--14041267 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14041206 CTGGTCTAAT
14041216 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14041241 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14041267 C
1 C
14041268 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14042396 original size:26 final size:26
Alignment explanation
Indices: 14042327--14042403 Score: 138
Period size: 26 Copynumber: 3.0 Consensus size: 26
14042317 TGGTGCGATA
*
14042327 TTAGACTGGGAATTAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
14042353 TTAGACT-GGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
14042378 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
14042404 CAAAGTCAAC
Statistics
Matches: 49, Mismatches: 1, Indels: 2
0.94 0.02 0.04
Matches are distributed among these distances:
25 24 0.49
26 25 0.51
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:14043717 original size:902 final size:903
Alignment explanation
Indices: 14041511--14057578 Score: 17733
Period size: 902 Copynumber: 17.9 Consensus size: 903
14041501 AAGAGACGTA
* * * * * * ** *
14041511 CGGGCGCTCAGTCAGCCAGAGGGGTGGGATACGCAAGTCGGGGATCGACCTTGTCCCCCTCTACG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * * * * *
14041576 TACTACCAATTCTGTTGTCGCAACCTTCGGTCCTGTCCGATCCTAGACTGGGAATGAACTCCGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
14041641 TACCTAAGCCAACTGAGGAAACGA---G-CGGGC-GG-GAG-GA-CACTACGCCGGCTAGAGAGA
131 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
* * * *
14041698 CAGGATGCGCAAGCCGTGTATTGATAGGGTGGTAGGTGGGTTTAGGCGCATCTTCATATTTCTGC
196 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
14041763 GTTCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
261 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * *
14041828 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTTGGGATTTT
326 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * * * * *
14041893 TTTAAATTTTTTTGGAAGGAGCTTTGGCCCCAAACTTGGTAGACATCATCTTTGTATTTTTCTTG
391 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * *
14041958 GCATGCACAAAAAAAATCAGCTGAAAACTCGAAGTTTACAAGATTTTGCGACCATTTGAAAAAAG
456 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
14042023 TGTCCCCATTTTAGGCACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTA
521 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
14042088 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGACAATATAAGGGCCAAGTACCAGCA
586 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * *
14042153 CCCATCCCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCACCGGAACCCCAATGCCGTCA
651 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCG
* * * *
14042216 GTCAGGTCCTCC-AGCGATGCTCCGACGATGGAGCCCCGGCGAAGAAAAATACGGCACCAGCACA
716 GTCAGGTTCTCCGA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * **
14042280 TGCCCAAGCCCAACATGTGCTGCCTTAACCCTCGATCTGGTGCGATATTAGACTGGGAATTAACT
780 TGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC----G-G----T---CT--G-------T
*
14042345 CCGTATGCTTAGACT-GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCAAAG
820 CCG-AT-CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
14042409 TCAACCTC-TGAAATGAGCGTG
883 TCAACC-CACGAAACGAGCGTG
* * * * *
14042430 CGGGCACTCAGTCGGCCAGAGGGGTGGGATGTGCAAGCCGGGGATCGATCGGGTCCCCCTCTGTG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
** * * * ** *
14042495 TGCTGTCGATTCTGCTACCACAACCCTTAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
14042560 CGCCTAAGCCAACCGATGAAA--A--GAACGGGCGGGTGGGCGGGCACTACGCCGACCAGAGAGA
131 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
* * * * * * * * *
14042621 CGGTATGCGCAAGTCATGGATCGGTAAGGTGGTAGGTGGGTTTGGGCACATCCTCATATTTTTGT
196 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
14042686 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
261 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
*
14042751 TCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
326 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * *
14042816 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAATTTGGCAGACGTCATCCTTGTATTTTTGTTG
391 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* **
14042881 GCATGCACAAAAAAATTCAGCT-GAAACTCGAAGTGTACAAGATTTTGTGACCATTTTCAAAAAG
456 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
14042945 TGTCCCCATTTCAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTA
521 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
14043010 AGGGGGGGTGAGTTGC-CGAGGTTTGATGAGGGATA-GGGGCCAATATAGGGGCCAAGTACCAGC
586 AGGGGGTGTGAGTT-CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
**
14043073 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTTGGAACCCCAATGCCGTC
650 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC
* * * *
14043138 GGTCAGTTTCTCCGACAATGCTTCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACA
715 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
** * * * *
14043203 TGCCCGAGCCCATAATGTGCTGTCGCAACCTTCGGTCCTGTCCGATCTTATACTAGGAATGAACT
780 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGTCCGATCTTAGACTGGGAATGAACT
* *
14043268 CCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
844 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
*
14043328 CGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-AGTCGGGTCCCCCTCTGC
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGC
* * * * **
14043392 GTGCTACCAATCCTGCTACCACAACCCTCGGCCCAATCCGATCTTAGACTGGGAATGAACTCCGT
65 GTGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * *
14043457 ATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGGGGGCGAGCACTACGCCAGCCAGAGAC
130 ATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* * * * *
14043522 ACGGGATCCGCAAGCCGTGGATCGATAGGTTGGTAGGTAGGTTTAGGCACATGTTCATATTTCTA
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
14043587 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTCACGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
** ** *
14043652 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTCAGGATTT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
* *
14043717 TTTAAAATTTTTTCGGATGGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTGTT
390 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * *
14043782 GGCATGCATAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTATGACCATTTGAAAAAA
455 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * ** * *
14043847 GTGTCACCATTTCAGACACTTTAATAGCTACTGGCAGTGAACCCGTAAAATCTAAAATGCTCTTT
520 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
14043912 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATATGGAGCCAATATAAGGGCCAAGTACCAGC
585 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * * *
14043977 ACCCATCGCACATCATGTGCGCACA-TCCCCCTGCCCCCTCG-TCACCGGAACCCCAATGTCGCC
650 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC
* **
14044040 GGTCAGG-TCATCC-AGCGATGCTCCGACGATGGAGCCCC-AGCGAAGAAAAATGTAGCACCAGC
715 GGTCAGGTTC-TCCGA-CGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGC
* * * *
14044102 ATATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGA
777 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGTCCGATCTTAGACTGGGAATGA
* * **
14044167 ACTCCGTATGCTTAGACTGGGAATGAACTCTGTAAGCCTAAGTCAACCCACGAAACGATAGTG
841 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
14044230 CGGTCACTCAGTCGGCCAGA-GGGC-GGATGCGTAAGCCGAGGATCGATCGGGTCCCCCTCTACG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * * * *
14044293 TGCTGCCGATCTTGCGGCCACAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * * * * *
14044358 TGACTAAGGCAACTGATGAAACGAGTTGG-CGGGCGGGCGGGCGAGCATTATGCCGGCAAGAGAG
131 TGCCTAAGCCAACCGACGAAACGAG-CGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* * *
14044422 ACGGGATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTTTG
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
14044487 CATGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * ** *
14044552 GTCATGGCAAGACGACTCATTTTCTA-TTTTCATGA-TTTCAAAAC-TTTTGCGG-TCGGGATTT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
* *
14044613 TTTAAAACTTTTTT-GGAAGGACTTTTGGCCCCAAACTAGGTAGACGTGATCCTTGTATTTTTGT
390 TTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
14044677 TGGTATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGGCCATTTGAAAAA
454 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* *
14044742 AGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTATAAAATCTCAAATGCTCTT
519 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * *
14044807 TAAAGGGGGTGTGAGTTCTCAAGGTTTGATGCGGCATAGGGGGCCAATATAAGGGCCAAGTACCA
584 T-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * *
14044872 GCACCCATCGCACATCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCAGAACCCCAATGTCG
648 GCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCG
* * * * * * *
14044937 CCAGTCAGGTTCTCCGGCGATGCTCGGGCGATGGTGCCCCGACGAAGAAGAATAC-GCACCAGCA
713 TCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
** * *
14045001 CATGGTCGAGCCCAGCATGTGCTGCCGTAA--C-C-ATC-G---G----T---CT--G---G---
778 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGTCCGATCTTAGACTGGGAATGAAC
* * * *
14045043 TCCG-AT-CTTAGACTGGGAATGCACTCCGTATGCCTAAGTTAACCCACGAAACGAGTGTT
843 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * * ** *
14045102 CGGGTGCTCAGCCGGCAAGAGGGGTGAGATGCACGAGCCGAGGATCGATCGGGTCCCTTTTTGCG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
** * * * * ** *
14045167 TGCTAATGATCCTACTGCCACAACCCTCAGTCTGGTATGAT-TATAGATTGGGAATGAACTCCGT
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCT-TAGACTGGGAATGAACTCCGT
*
14045231 ATGCCTAAGCCAACCGACG-AA--A-C-GA---GCGGGC--G-G-GCACTACACCGGCCAGAGAG
130 ATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* * * * *
14045284 ACGGGATGCGCAAGTCGTGTATTGATAGGGTGGTAGGTGGGCTTAGGCGCATCTTCATATTTCTG
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
** * *
14045349 TGTGCCAATGCCATTTTTAAGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
** * * * * * *
14045414 TTCACAGCAAAACAACTCATTTTCTATTTTTCATGCTTTTCGAAACTTTTTACGGTTTGGGATTT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
* * *
14045479 TTTAAAATTTTTTTGGAAGGTA-TTTTGGCCCCAAACTTGGTAGACGTGGTCCTTGTATTTTTTT
390 TTTAAAATTTTTTCGGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* *
14045543 TGGCATGCACAAAAATATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
454 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
14045608 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
519 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14045673 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTACCAG
584 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * ** *
14045738 CACCCATCGCACATCATGTGCGCACACCCCCCCCGGCACCCCCAATTACCGGAACCCCAATGCTG
649 CACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCG
* * * * * *
14045803 -CTGGTTAGGTTCTCCGACGATGGTCTGGCGATGGTGCCCCGACAAAGAAAAATACGGCACCAGC
713 TC-GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
* * **
14045867 ACTTGCTCGAGCCCAGCATGTGCTATCGCAA-CC-C--T-TG---G-TC-T-GA-T-----T---
777 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGTCCGATCTTAGACTGGGAATGAA
*
14045912 -T--G-AT-CTTAGACTGGGAATGAACTCCGTATGCATAAGTCAACCCACGAAACGAGCGTG
842 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * *
14045969 CGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTTGGGTCCCCCTCTGCG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
** ** * * * * *
14046034 TGCTGTCGATCCTGCTATCGCAACCCTCGATCTGGTCTGATCTTAGACTGGGAGTGAACTCCGTC
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * *
14046099 TGCCTAAGCCAACAGACGAAACGA---G-CGGGCGGGC---AG-GCATTACGCCGGCTAGAGAGA
131 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
* * *
14046156 CGGGATGCGCAAGCTGGGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
196 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
14046221 ATTCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
261 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* **
14046286 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTTGGATTTT
326 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * *
14046351 TTAAATTTTTTTTGGAAGGA-TCTTTGGCCCTAAACTTGGTATACGTGATCCTTGTATTTTTGTT
391 TTAAAATTTTTTCGGAAGGAGT-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * *
14046415 GGCATGCACAAAAAAAATCAGCTAAAAACTCGAAGTGTACATGATTTTGCGACCATTTGAAAAAA
455 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * *
14046480 GTGTCCCCATTTCAGGCACTTTAAAGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCT-TTT
520 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
14046544 TAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGC
585 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
** *
14046609 ACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCGGCCCCCCGGCCCCCCCGATCATCGA
650 ACCCATCGCACATCATGTGCG--CA-----C-A-----C--CCCCCCGGCCCCCCCGATCGCCGG
* * * *
14046674 AACCCTAATACCGTCGGTCAGGTCCTCC-AGCGATGCTCCGACGATGGAGCCCCGACGAAGAAAA
700 AACCCCAATGCCGTCGGTCAGGTTCTCCGA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* * ** * *
14046738 ATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCATAACCCTCGGTTTGGTGCGATCTT
764 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GTCCGATCTT
* * * *
14046803 AGACTGGGAATTAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATG-CTTAG---A--CA-G
828 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* ** * *
14046861 GAATTAAC-TC
893 AAACGAGCGTG
*** * * ** * *** * * ** * * * *** **
14046871 CGTATGCTTAGACTGGGAATTA-ACTCCGTATGC-TTAGACTGGGATTGAACTCCATATGCCAAA
1 CGGGCGCTCAG-CCGGCCA-GAGGGGCGGGATGCGCAAGCCGGGGATCG-A-T-CGGGT-CC-CC
* ** * * * ** * * * * * ** * * * * *
14046934 GTCAACCTACGAAATGAGCGTGCGGGCGC-TCAGTCGG-CCAGAGGGGCGGGATGCGTAAGCCGG
59 CTCTGCGTGC-TACCGATCCTGCTGCCGCAACCCTCGGTCC----GGTC-CGAT-C-TTAGACTG
* * * * * * ** * * **** ** * *
14046997 GGAATGATCGGGTCCCCCTCTGCGT--G-CTATCGATTCTGCTAC-CGC-AACCCTTAGTCCAGT
116 GGAATGAAC---T--CCGTATGCCTAAGCCAACCGA--C-GAAACGAGCGGA-CGGGCGGGCGGG
* * * * **** * * *** * * *
14047057 CTGATC-TTA-GACTGG-GA-ATGA-ACTCTTTACACCTAAGCCAACCGAT-GAAACGAGTGGGC
172 C-GAGCACTACG-CCGGCCAGA-GAGACGGGATGC-GC-AAGCC-GTGGATCGATA-GGGT-GGT
* * ** * *** * * *
14047116 GGGTGGG--TGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA-GTCATGGATCGGTAGGGTG
229 AGGTGGGTTTAGGCAC-A--TC-TTCATA-TTTCTGCATGC-CAATGCCAT---T---T----T-
* *** * * *
14047178 GTAGGTGGGTT-TAGGCACATCCTCATATTTTTGTGTGCC--AATGCCATTTTTATGGCTTGTAA
277 -TA--TGGCTTGTA---A-AT--TCATA-CAATG-GTCCCTTAA-GCC---TTCA---C--GTGA
* *** * ** ** * ***** ** * *
14047240 ATTCTTACAATGGTCCCTTAAG-C-C-TTCACGTGAAGTTTCATGGCAAGATGACTCGTTTT-CT
322 AGT-TT-C-ATGG--CAAGACGACTCATTTTC-T-ATTTTTCA-CGATTTTTGAAACTTTTTACG
* **** * *
14047301 ATTTTTAATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGAAGTTT
379 GTTCGGGAT-TTTTT----------------------------AAAATTTTTTCGGAAGGAGTTT
* * * * *
14047366 TGGCCCCAAATTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATCCACAAACAAATTCAGCTGA
415 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* * ** *
14047431 AAACTCGAAGTGTACAAGATTTTGTCATCATTTTCAAAAAGTGTCCCCAATTCAGACACTTTAAT
480 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* *
14047496 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGGTGAGTTCTTGAGGTTT
545 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
14047561 GATGAGGGATAGGGGGCCAATATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACA
610 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * * * *
14047626 CCCCCCCGACCCCCCCGATCGTCGGAA--CTAATGCCGCCGGTCATGTTCTCCGGCGATGCTCTG
675 CCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCG
* * *
14047689 ACGATGGTGCCCCGGA-GAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTC
740 ACGATGGTGCCCC-GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * * *
14047753 ACAACCTTCGGTCCTGTCCGATCTTATACTAGGAATGAACTCCATATGCTTAGACTGGGAATGAA
804 GCAACCCTCGGT-CTGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* *
14047818 CTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTG
868 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * *
14047854 TGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * **
14047919 TGCTACCAATCCTGCTGCCACAACCCTCGGTCCAAT-CGAATCTTAGACTGGGAATGAACTCCGT
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCG-ATCTTAGACTGGGAATGAACTCCGT
* * * * * *
14047983 ATGCCTAAGCTAACCGATGAAACGAGCGGGCGGGCGGGGGGGCGAGCACTACGCCAGCCAGAGAC
130 ATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* * *
14048048 ACGGGATGCGCAAGCCGTGGATCGATAGGTTGGTAGGTAGGTTTAGGCACATGTTCATATTTCTG
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
14048113 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* ** *
14048178 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
* * *
14048243 TTTAAAATTTTTTCGGATGGAGTTTTGGCCCCAAACTTGGTTGACGTAATCCTTGTATTTTTGTT
390 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* *
14048308 GGCATGCATAAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
455 GGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * *
14048373 AGTGTCACCATTTCAGACACTTTAATGGCTACTGGCAGCGAACCTGTAAAATCTAAAATGCTCTT
519 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * *
14048438 TAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGAATAGGGAGCCAATATAAGGGCCAAGTACCAG
584 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * * *
14048503 CACCCATCGCACATCATGTACGCACATCCCCCCGACCCCCCCGATCACCGAAACCCCAATGCCGC
649 CACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGT
* * * * * *
14048568 CGATAAGGTCCTCCAACGATGCTCCGATGATGGAGCCCC-AGCGAAGAAAAATGCGGCACCAGCA
714 CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCA
* *
14048632 CATGCCCGAGCCCAGTATGTGCTACCGCAA-CC-C--TC-G---G-TC-----C---G---G---
778 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGTCCGATCTTAGACTGGGAATGAAC
* *
14048674 TCCG-AT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGAGTG
843 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
** ** * * *
14048733 CGTTCGCTCAGCCGGCCAGAGGGGCGAAATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGTG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * *
14048798 TGCTTCCGATCCTG-TGACCACAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGATCTCCGT
66 TGCTACCGATCCTGCTG-CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * * * *
14048862 ATGCCTAAGGCAATCGACGAAACGAGTGGGCGGGCGGGCGGGCGAGCACTACGCCGACAAGAGAG
130 ATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* * *
14048927 ACGGGATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGGGTTTAGGCTCATCTTCATATTTTTG
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* * * *
14048992 CGTGCGAATTCCATTTTTATGGCTTGTAAATTCATACAATGTTCCCTTAAGCCTTCACGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * *
14049057 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTAAAACTTTTTGCAGTTCGGGATTT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
*
14049122 TTTAAAACTTTTTT-GGAAGGAGTTTTGGCCCCAAACTAGGTAGACGTGATCCTTGTATTTTTGT
390 TTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* *
14049186 TGGTATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
454 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* *
14049251 AGTATCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
519 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14049316 TAAAGGGGGTGTAAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
584 T-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* **
14049381 GCACCCATCGCACATCATGTGCGCACACCCCCCAGGCCCCCCCGATCATCGGAACCCCAATGCCG
648 GCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCG
* ** * * * * *
14049446 GCAATCAGGTTCTCCGGA-GATGCTCGGGCGATGGTGCCCCGACGAAGAAGAATACGGCACCAAC
713 TCGGTCAGGTTCTCC-GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
** * ** *
14049510 ACATGGTCGAACCCAGCATGTGCTGCCGTGA--C-C-ATC-G---G-TC----A---GG--T---
777 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGTCCGATCTTAGACTGGGAATGAA
* * * * *
14049554 CT--G-AT-CTTAGACTGGGAATGAACTCCTTATGCATAAGTCAACCCAAGAAACAAGCGTT
842 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
14049612 CGGGTGCTCAGCCGGCAAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTTCCTCTCTGTG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * ** * *
14049677 TGCTACCGATCCTGTTGCCGCAACCCTCAGTCTGGTATGATCGTAGATTGGGAATGAACTCCGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* *
14049742 TGCCTAAGCCAACCGACGAAACGAGCGGA--------C--G-G-GCACTACGTCGGCCAGAGGGA
131 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
* * * * * *
14049795 CGGGATGCGCAAGCCATGTATTGATAGGGTGGTAGGTGGGCTTAGGCGCATCTTCATATTTCTAC
196 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
14049860 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
261 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * *
14049925 TCATGGCAAAACAACTCATTTTCTATTTTTCATGACTTTCGAAACTTTTTACGGTTCGGGATTTT
326 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * **
14049990 TTAAAATTTTTTTGGTAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGGTCGATGTATTTTTGTT
391 TTAAAATTTTTTCGGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* *
14050054 GGCATGCACAAAAAAATTCAGCTAAAATCTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
455 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
14050119 GTGTCCCCATTTCAGACACTTTAATGGCTATTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTT
520 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* **
14050184 AAGGGGGTGTGAGTTCTCGAGGTTTGATTAGGGATAGAAGGCCAATATAAGGGCCAAGTACCAGC
585 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* *
14050249 ACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGTAACCCCAATGTCAC-
650 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATG-C-CG
* * *
14050312 T-GGTCAGGTTC-CC--C---G----G-CGATGGTGCCCCGACAAAGAAAAATACGGCACCAGTA
713 TCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
* * *
14050365 CTTGCCCGAGTCTAGCATGTGCTGCCGCAACCCTCGGT-TCGATCCGATCTTAGACTGGGAATGA
778 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-G-TCCGATCTTAGACTGGGAATGA
* * *
14050429 ACTCCGTATGCTTAGACTGGGAATGAACTCCCTATGCCTAAGTTAACCCACGAAACGAGCGTT
841 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * *
14050492 CGGGCGCTCAGCCGGCCAGAGGGACGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTTCTACA
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * * *
14050557 TGCTGCCAATCCTGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGATTGGGAATGAACTCTGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* ** * * * * *
14050622 CGCCTAAGCCAATAGACGAAACGAGCGGACGGGCGGGCGAGCGGGTACTACACCGGCCAGAGAGG
131 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
* * *
14050687 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCATATCTTCATATTTCTAC
196 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
14050752 ATGCCAATGCCATTTTTATGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
261 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
** * **
14050817 TCATGGCAAGACGACTCGGTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGGGATTTT
326 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * * *
14050882 TTAAAATTTTCTT-GGATGGAGTTTTGGTCCCAAACCTGGTAGACTTGGTCCTTGTATTTTTGTT
391 TTAAAATTTT-TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * * * *
14050946 GGCATGGACAAAAAAATTCAGCCAAGAACTTGAAGTGTACAAGGTTTTGTGACCATTTGAAAAAA
455 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
14051011 GTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCACAAATGCTCTTT
520 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
14051076 AAGGGAGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
585 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * * *
14051141 ACCCATCGCACACCATGTGCACACACCCGCCCGGCCCCCCCGATCGCCGTAACCCCAATGTC-AC
650 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC
14051205 AGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
715 -GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* *
14051259 ATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGATCCGATCTTAGACTGGGAATGAAC
779 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTG-TCCGATCTTAGACTGGGAATGAAC
* * *
14051324 TCCATATGCTTAGACTAGGAATGAACTCCCTATGCCTAAGTCAACCCACGAAACGAGCGTG
843 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
14051385 CGGGCACTCAGCTGGCCAGAGTGGCGGGATGCGCAAGTCGGGGATCGGTCAGGTCCCCCTCTGCG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * *
14051450 TGCTACCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGATTGGGAATGAACTCTGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * ** ** * *
14051515 TGCCTAAGCCAATCGAAGAAACGAGCGGGCGACCGGGCGACCGGGCACTACACCGGCCAGAGA-A
131 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
*
14051579 GCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA
196 -CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
** *
14051644 TGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* ** * **
14051709 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCCATTCGGGATTT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
* * * * *
14051774 TTAAAAATTTTTTTGGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGGTGCTTGTATTTTTGTT
390 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * * *
14051839 GGCATGCACAAAAAATTTCAGCCAAAAACTCGAAGTGTCCAATATTTTGTGACCATTTGAAAAAA
455 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * * *
14051904 GTGTCCCCATTTCAAACACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTC
520 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * *
14051969 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-AGGGCCAATATAAGGGGCAAGTGCCAGC
585 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * **
14052033 ACCCATCGCACATCATGTGCGCACA-CTCCCCGACCCCCCCGATCGCTGGAATGCCAATGCCGTC
650 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC
* * ** * *
14052097 GATCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGTGAAGAAAAATGAGGCAGCAGCACA
715 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * *
14052162 TGCTCAAGCCCAGCATGTGCTACCGCAA--C-C---C--T-CAATC-----C--GG--T---CT-
780 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGTCCGATCTTAGACTGGGAATGAACTC
*
14052205 -G-AT-CTTAGGCTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
845 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * ** *
14052261 CGGGCGCTCAGTCGACCAGAGGGGCGGCATGC-CTAAGTAGGGGATCGATCGGGTCCCCCTCTGT
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC-AAGCCGGGGATCGATCGGGTCCCCCTCTGC
* * * * * * * *
14052325 GTGCTGCTGATCCTACTGTCGCTACCCTCGGTCTGGCCCGATCTTAGACTGGGAATGAACTCCAT
65 GTGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * ** *
14052390 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGAGCGGGCAAGACGCCGGCCAGAAAG
130 ATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* * *
14052455 GC-GGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* * * *
14052519 CGTGGCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTGATGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * ** * * *
14052584 TTCATGCCAAGATGACACGGTTTCTATTTTTCATGATTTTTGAAACTTTTTTGCGGTTAGGGATT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAAC-TTTTTACGGTTCGGGATT
* **
14052649 TTTTAAAATTTTTTCGGAAGAAGTTTTGGCCCCAAACTTATTAGACGTGATCCTTGTATTTTTGT
389 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
14052714 TGGCATGCATAAAAAAATTCAGCTAAAAACTC--AGTGTACAAGATTTTGGGACGATTTGAAAAA
454 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * *
14052777 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTATAAAATCTCAAATGCCCTT
519 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14052842 TAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
584 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * **
14052907 CACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCGTCAGAACCTCAATGCCAC
649 CACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGT
* * * * * * * *
14052972 CGCTTAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCCTGACGAAAAAAAATGCAGCACCAGCAC
714 CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
** * * *
14053037 ATGCCCGAGCCCAGCATGTGCTGCCAAAACCCTCGGTCTGGTCTGATCTTAGTCTGGGAATAAAC
779 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GTCCGATCTTAGACTGGGAATGAAC
* * * *
14053102 TTCGTATGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTG
843 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* ** * * *
14053163 CGGGCGCTCAGCCGGCTAGAGGGGCAAGATGCGCAAGCCGGGGATTG-GCTGGGTCCCCCTATGC
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGC
* * * *
14053227 GTGCTGCCGATCCTGCTGCCACAACCCTCAGTCTC-GTCTGATCTTAGACTGGGAATGAACTCCG
65 GTGCTACCGATCCTGCTGCCGCAACCCTCGGTC-CGGTCCGATCTTAGACTGGGAATGAACTCCG
* * *
14053291 TATGCCTAAGCCAACCGATGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGCCGACCAGAGA
129 TATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGA
14053356 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
194 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*** * * *
14053421 ATGTGCCAATGCCATTTTTATGGCTAGTAAATTCATGCAATGGTCCCTTAACCCTTCACGTGAAG
259 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* *
14053486 TTTAATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATT
324 TTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
* * **
14053551 TTTCAAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAAATTCATAGACGTGATCCTTGTATTTTTG
389 TTT-TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * * *
14053615 TTGGCATGCACAAAAAAAATCAGGTAAAAAATCGAAGTGTACAAGATTTTGCGACCATTTGAAAA
453 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * * * *
14053680 AAGTGTCCCCATTTTAGACACTTTAGTAGCTACTTGCAGCAAACCTGTAAAATCTCAAATACTCT
518 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
14053745 TTAAGGGGGTGTGAGTTCTCGAGGATTGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCA
583 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
** * * *
14053810 GCACCCATCTTACATCATGTGCGCACA-CCCCTCGG-CCCCCCGATCACCGGAACCCCAATGCCA
648 GCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCG
* * ** * * * * *
14053873 CCGATCAGGTTCTCCGGTGATGCTCCGGCGATGGTGGCCCGGCGAAGAAAAATGTGGGACCAGCA
713 TCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
* * * ** * * *
14053938 CATGCTCTAGCCCAGCATGTGCTGTCAAAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATTAA
778 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGTCCGATCTTAGACTGGGAATGAA
* *
14054003 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCATG
842 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * **
14054065 CGGGCGCTCAGTCGCCCAAAGGGGCGAGATGCATAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
** * * * *
14054130 TGCTGTCGATCCTGCTACCGCAACCTTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
14054195 TGCCTAACCCAACCGACGAAACGAGC-GAGTGGGCGGGCGGGTGGGCACGACGCTGGCCAGAGAG
131 TGCCTAAGCCAACCGACGAAACGAGCGGA-CGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
*
14054259 ATC-GGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
195 A-CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
14054323 GTATGCCAATGCCATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
259 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * * * * **
14054388 TTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTGCGATTTTGGATT
324 TTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
* *
14054453 TTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTT
389 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * * *
14054518 TGGCATGCCCAAAAACAA-TCAACTAAAAACTCGAAGTGAACAAGATTTTGTGACTATTTGAAAA
454 TGGCATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* *
14054582 AAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCTCT
518 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
14054647 TTAAGGGGGTGTGACTTCCCGAGGTTTGGA-GAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
583 TTAAGGGGGTGTGAGTTCTCGAGGTTT-GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
14054711 AGCACCCATCGCACATCATGTGCGCACACCCCCCC-GACCCCCCGATCGCCAGAACCTCAATGTC
647 AGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCC
* * * *
14054775 GTCGATCAGG-T-T----C--T-CT--GACGA---TGCTCCGACGAAGAAAAATACGGCACCAAC
712 GTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
* * * * *
14054826 ACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAGTCCTATGTTAGATTGGGAATGA
777 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGTCCGATCTTAGACTGGGAATGA
* * * * *
14054891 ACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAATCAACACACAAAACAAGCGTG
841 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * ** * * *
14054954 TGGGCGCTCAGCCGGCCAGA-GGG-GGGATGCACAAGATGGGGATCG-GCTGGATCCCCCTCTAC
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGC
* * * ** * * * ** * * * *
14055016 GTGCTGCCAATCCTACTGTTGTAACCTTCAGTCCAATTCGATCTTTGACTAGGAATAAACTCCGT
65 GTGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * * * * *
14055081 ATGCCTAAGCCAACCGACGAAATGAGTGGGCAGGCAGGCGGGCGGGCACTACGTCGGCCAGAGAG
130 ATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* * *
14055146 ACGGGATGCGCAAGCTGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
** * *
14055211 TGTGCCAATGCCATTTTTGTGAG-TTGTAAATTCATACAATGGTCCCTTAAGTCTTCACGTGAAG
260 CATGCCAATGCCATTTTTATG-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * ** * *
14055275 TTTCATGGCAAGACGACT-AGTTTTTTATTTTTCACAATTTTTGAAACTTTTGGCAGTCCGGGAT
324 TTTCATGGCAAGACGACTCA-TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * * *
14055339 TTTTTAAAATTTTTTCGAAAGGAGTTTTTGCCCCAAACTTGGTAGATGTGATCGTTGTATTTTTG
388 TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
*
14055404 TTGGCATGCACAAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGA-TTTGTGACCATTTGAAA
453 TTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
14055468 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCAGCAAACCTGTAAAATCTCAAATGCCC
517 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
14055533 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAGTATAAGGGCCAAGTACC
582 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* ***
14055598 AGCACCCATCGGACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTTTGAACCCCAATGCC
647 AGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCC
* * * * * *
14055662 GTCGGTTAGGTTCTCCGGCGATGCTCC-AGCGATGGTGCCTCGGCGAAGAAAAATACGGCACCAA
712 GTCGGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
* * * * *
14055726 CACAAGCCCGA-CCCAGCATGTGCTACCGTAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATG
776 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GTCCGATCTTAGACTGGGAATG
* * * * *
14055790 AACTTCGTATGTTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTG
840 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
14055854 CGGGCGCTCAACCGGCCAGAAGGGTGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCT
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * * * *
14055919 TGCTAGCGATCCCGCTGCCGCAACCCTTGGTCCGGTCCAATCTTCGACTGGAAATGAACTTCGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
14055984 TGCCTGAGCCAACCGACGAAACGAGCGGGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGA
131 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
*
14056049 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGC
196 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
14056114 ATGCCAAAGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
261 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
** * *
14056179 TCATGGCAAGACGACTTGTTTGCTATTTCTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
326 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * *
14056244 TTAAAAATTTTGTCGAAAGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGCT
391 TT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * *
14056309 AGCATGTACAAAAAGAA-TCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
455 GGCATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
14056373 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
519 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14056438 TAAGGGGGTGTGAGTTCTCAAGGTTTGAT-ATGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
584 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* ** * * * *
14056502 GCACCCGTCGCACATCATGTGCATACACCCCCTCGGCCCCACCGATCGTCGAAACCCCAATGCCG
648 GCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCG
* * * * *
14056567 -CTGGTCAGGTTTTCCAATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCTCCAGC
713 TC-GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
* * * * * *
14056631 ACATGCTCGAGCCCAGCATGTGCAGTCACAACCCTCGGTCCGATCCGATCTTAGACTGAGAATGA
777 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTG-TCCGATCTTAGACTGGGAATGA
* * * *
14056696 ACTCCGTATGCTTAGACTAGGAATGAACACTGTATGCCTAAGTCAACCCATGAAACGAGCGTG
841 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * *
14056759 TGAGCGCTCAGCCGGCCAGGGGGGCAGGATGCGCAAGCCGAGGAT---T--GG------TC-G-G
1 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * *
14056811 -GC--CC---CCT--T----CAA-------TCCGATCCAATCTTAGATTGGGAATGAACTCCGTA
66 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
** * ** *
14056857 TGCCTAAGCCAACCGACGAAACGAATAGG-CGGGCGAGCGGGCGAAAACTACACCGGCCAGAGAG
131 TGCCTAAGCCAACCGACGAAACG-AGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAG
* *
14056921 ACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTCTAGGCACATCTTCATATTTCTG
195 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
14056986 CATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
260 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
** * * * *
14057051 TTCATGGCAAGACGACTTGTTTTCTATATTTCACGATTTTTGAAACTTTTTATGATTCGAGATTT
325 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
* * **
14057116 TTTAAAATTTTTACGAAATTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
390 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * *
14057181 GGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTCTAACCATTTGAAAAAA
455 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
14057246 GTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTATAATCTCAAATGCTCTTT
520 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
*
14057311 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACCAGC
585 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
14057376 ACCCATTGCACATCATGTGCGCACACCCCCTCGGCCACCCCGATCGCCGGAACCCCAACT-CCGT
650 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAA-TGCCGT
* * * * * **
14057440 CGGTCAAGTTCTCGGGCAATGCTCTGACGATGGTGCCCCGACGAAGAAAAATGCAACACCAGCAC
714 CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * **
14057505 ATGCCCGAGCCAAGCATGTGCTGCTGCCACCCTCAATCTGGTCCGATCTTAGACTGGGAATGAAC
779 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GTCCGATCTTAGACTGGGAATGAAC
14057570 TCCGTATGC
843 TCCGTATGC
14057579 CTAAGACAAC
Statistics
Matches: 12945, Mismatches: 1774, Indels: 907
0.83 0.11 0.06
Matches are distributed among these distances:
854 55 0.00
855 1 0.00
856 1 0.00
857 1 0.00
858 1 0.00
859 2 0.00
862 154 0.01
863 10 0.00
864 13 0.00
865 139 0.01
866 360 0.03
867 578 0.04
868 9 0.00
869 4 0.00
870 90 0.01
871 379 0.03
872 465 0.04
873 282 0.02
874 228 0.02
875 209 0.02
876 418 0.03
877 4 0.00
878 123 0.01
879 840 0.06
880 206 0.02
881 4 0.00
882 5 0.00
883 2 0.00
884 108 0.01
885 7 0.00
886 16 0.00
887 565 0.04
888 38 0.00
889 153 0.01
890 3 0.00
891 44 0.00
892 514 0.04
893 768 0.06
894 9 0.00
895 7 0.00
896 187 0.01
897 110 0.01
898 257 0.02
899 73 0.01
900 410 0.03
901 69 0.01
902 2049 0.16
903 821 0.06
904 320 0.02
905 224 0.02
906 6 0.00
907 9 0.00
908 12 0.00
909 5 0.00
910 29 0.00
911 3 0.00
912 1 0.00
913 12 0.00
914 1 0.00
915 5 0.00
916 2 0.00
917 2 0.00
918 11 0.00
919 130 0.01
920 2 0.00
921 54 0.00
922 140 0.01
923 380 0.03
924 6 0.00
925 20 0.00
926 8 0.00
927 8 0.00
928 2 0.00
929 3 0.00
930 23 0.00
931 15 0.00
932 6 0.00
933 5 0.00
934 2 0.00
935 5 0.00
936 1 0.00
937 1 0.00
940 4 0.00
942 5 0.00
943 7 0.00
944 12 0.00
946 3 0.00
947 3 0.00
949 12 0.00
950 7 0.00
951 6 0.00
953 4 0.00
956 1 0.00
957 1 0.00
958 5 0.00
959 2 0.00
960 5 0.00
961 6 0.00
962 17 0.00
963 26 0.00
964 3 0.00
965 1 0.00
966 7 0.00
967 19 0.00
968 24 0.00
969 7 0.00
970 9 0.00
972 13 0.00
973 2 0.00
974 2 0.00
975 145 0.01
976 7 0.00
977 32 0.00
978 9 0.00
979 6 0.00
980 2 0.00
981 4 0.00
982 14 0.00
983 16 0.00
984 1 0.00
985 1 0.00
990 2 0.00
991 165 0.01
992 84 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (903 bp):
CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
TGCTACCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGA
CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCG
GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGTCCGATCTTAGACTGGGAATGAACTCC
GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
Found at i:14046665 original size:9 final size:8
Alignment explanation
Indices: 14046634--14046663 Score: 51
Period size: 8 Copynumber: 3.8 Consensus size: 8
14046624 TGTGCGCACA
*
14046634 CCCCCCGA
1 CCCCCCGG
14046642 CCCCCCGG
1 CCCCCCGG
14046650 CCCCCCGG
1 CCCCCCGG
14046658 CCCCCC
1 CCCCCC
14046664 CGATCATCGA
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
8 21 1.00
ACGTcount: A:0.03, C:0.80, G:0.17, T:0.00
Consensus pattern (8 bp):
CCCCCCGG
Found at i:14046838 original size:26 final size:26
Alignment explanation
Indices: 14046800--14046929 Score: 183
Period size: 26 Copynumber: 5.0 Consensus size: 26
14046790 TTGGTGCGAT
* *
14046800 CTTAGACTGGGAATTAACTCTGTATG
1 CTTAGACTAGGAATTAACTCCGTATG
*
14046826 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATTAACTCCGTATG
14046852 CTTAGAC-AGGAATTAACTCCGTATG
1 CTTAGACTAGGAATTAACTCCGTATG
*
14046877 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTAGGAATTAACTCCGTATG
* *
14046903 CTTAGACT-GGGATTGAACTCCATATG
1 CTTAGACTAGGAATT-AACTCCGTATG
14046929 C
1 C
14046930 CAAAGTCAAC
Statistics
Matches: 95, Mismatches: 7, Indels: 4
0.90 0.07 0.04
Matches are distributed among these distances:
25 29 0.31
26 66 0.69
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATTAACTCCGTATG
Found at i:14046877 original size:51 final size:51
Alignment explanation
Indices: 14046800--14046929 Score: 179
Period size: 51 Copynumber: 2.5 Consensus size: 51
14046790 TTGGTGCGAT
* *
14046800 CTTAGACTGGGAATTAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATG
1 CTTAGAC-AGGAATTAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATG
* *
14046852 CTTAGACAGGAATTAACTCCGTATGCTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACAGGAATTAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATG
* * *
14046903 CTTAGACTGGGATTGAACTCCATATGC
1 CTTAGACAGGAATT-AACTCCGTATGC
14046930 CAAAGTCAAC
Statistics
Matches: 70, Mismatches: 7, Indels: 2
0.89 0.09 0.03
Matches are distributed among these distances:
51 52 0.74
52 18 0.26
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.30
Consensus pattern (51 bp):
CTTAGACAGGAATTAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATG
Found at i:14049506 original size:879 final size:877
Alignment explanation
Indices: 14042369--14065059 Score: 16232
Period size: 902 Copynumber: 25.3 Consensus size: 877
14042359 TGGAATGAAC
* * *
14042369 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCAAAGTCAACCTC-TGAAATGAGCGTGCGG
1 TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC-CACGAAACGAGCGTGCGG
* * * * *
14042433 GCACTCAGTCGGCCAGAGGGGTGGGATGTGCAAGCCGGGGATCGATCGGGTCCCCCTCTGTGTGC
64 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
** * * * ** * *
14042498 TGTCGATTCTGCTACCACAACCCTTAGTCCGG-TCTGATCTTAGACTGGGAATGAACTCCGTACG
129 TACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATG
* ** * *
14042562 CCTAAGCCAACCGATGAAA--A--GAACGGGCGGGTGGGCGGGCACTACGCCGACCAGAGAGACG
193 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* * * * * * * * **
14042623 GTATGCGCAAGTCATGGATCGGTAAGGTGGTAGGTGGGTTTGGGCACATCCTCATATTTTTGTGT
258 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
14042688 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
323 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * *
14042753 ATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT
388 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTT
* * *
14042818 AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAATTTGGCAGACGTCATCCTTGTATTTTTGTTGGC
453 AAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* **
14042883 ATGCACAAAAAAATTCAGCT-GAAACTCGAAGTGTACAAGATTTTGTGACCATTTTCAAAAAGTG
517 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* *
14042947 TCCCCATTTCAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
582 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* *
14043012 GGGGGGTGAGTTGC-CGAGGTTTGATGAGGGATA-GGGGCCAATATAGGGGCCAAGTACCAGCAC
647 GGGGTGTGAGTT-CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* *
14043075 CCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTTGGAACCCCAATGCCGTCGG
711 CCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGA
* * * **
14043140 TCAGTTTCTCCGACAATGCTTCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATG
775 TCAGGTTCTCCGA-GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATG
** *
14043205 CCCGAGCCCATAATGTGCTGTCGCAACCTTCGGTCCTGTCCGATCTTATACTAGGAATG
839 CCCGAGCCCAGCATGTGCTGCCGCAACC--C--T-C-G---G-TC-----CT--G---G
* *
14043264 AACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
1 ---TCC-GATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
*
14043329 GGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-AGTCGGGTCCCCCTCTGCG
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCG
* * * * *** *
14043393 TGCTACCAATCCTGCTACCACAACCCTCGGCCCAATCCGATCTTAGACTGGGAATGAACTCCGTA
126 TGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
14043458 TGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGGGGGCGAGCACTACGCCAGCCAGAGACA
191 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGA
* * * * *
14043523 CGGGATCCGCAAGCCGTGGATCGATAGGTTGGTAGGTAGGTTTAGGCACATGTTCATATTTCTAC
256 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
14043588 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTCACGTGAAGTT
321 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* ** * *
14043653 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTCAGGATTTT
386 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTT
* *
14043718 TTAAAATTTTTTCGGATGGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTGTTG
451 TTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * *
14043783 GCATGCATAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTATGACCATTTGAAAAAAG
515 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * ** * *
14043848 TGTCACCATTTCAGACACTTTAATAGCTACTGGCAGTGAACCCGTAAAATCTAAAATGCTCTTTA
580 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
14043913 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATATGGAGCCAATATAAGGGCCAAGTACCAGCA
645 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * ** * * *
14043978 CCCATCGCACATCATGTGCGCACATCCCCCTGCCCCCTCG-TCACCGGAACCCCAATGTCGCCGG
710 CCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGA
* * *** *
14044042 TCAGG-TCATCCAGCGATGCTCCGACGATGGAGCCCC-AGCGAAGAAAAATGTAGCACCAGCATA
775 TCAGGTTC-TCC-GAGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATACGGCACCAGCACA
* *
14044105 TGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATG
837 TGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G---G-TC-----CT--G---G
* * **
14044166 AACTCCGTATGCTTAGACTGGGAATGAACTCTGTAAGCCTAAGTCAACCCACGAAACGATAGTGC
1 ---TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * *
14044231 GGTCACTCAGTCGGCCAGA-GGGC-GGATGCGTAAGCCGAGGATCGATCGGGTCCCCCTCTACGT
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * * * *
14044294 GCTGCCGATCTTGCGGCCACAACCCTCGGTCTGG-TCTGATCTTAGACTAGGAATGAACTCCGTA
127 GCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTA
* * * * ** * * * *
14044358 TGACTAAGGCAACTGATGAAACGAGTTGGCGGGCGGGCGGGCGAGCATTATGCCGGCAAGAGAGA
191 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGA
* * *
14044423 CGGGATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTTTGC
256 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
14044488 ATGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTG
321 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * **
14044553 TCATGGCAAGACGACTCATTTTCTA-TTTTCATGA-TTTCAAAAC-TTTTGCGG-TCGGGATTTT
386 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTT
* *
14044614 TTAAAACTTTTTTGGAAGGACTTTTGGCCCCAAACTAGGTAGACGTGATCCTTGTATTTTTGTTG
451 TTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * *
14044679 GTATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAG
515 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
14044744 TGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTA
580 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-
* * *
14044809 AAGGGGGTGTGAGTTCTCAAGGTTTGATGCGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGC
644 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* *
14044874 ACCCATCGCACATCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCAGAACCCCAATGTCG-C
709 ACCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTC
* * * * *
14044938 CAGTCAGGTTCTCCGGCGATGCTCGGGCGATGGTGCCCCGACGAAGAAGAATAC-GCACCAGCAC
773 GA-TCAGGTTCTCC-GAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCAC
** * *
14045002 ATGGTCGAGCCCAGCATGTGCTGCCGTAACCATCGGT-CTGG
836 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* * * * *
14045043 TCCGAT-CTTAGACTGGGAATGCACTCCGTATGCCTAAGTTAACCCACGAAACGAGTGTTCGGGT
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * ** *
14045107 GCTCAGCCGGCAAGAGGGGTGAGATGCACGAGCCGAGGATCGATCGGGTCCCTTTTTGCGTGCTA
66 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTA
** * * * *
14045172 ATGATCCTACTGCCACAACCCTCAGTCTGGTAT-GAT-TATAGATTGGGAATGAACTCCGTATGC
131 CCGATCCTGCTGCCGCAACCCTCGGTCTGGT-TCGATCT-TAGACTGGGAATGAACTCCGTATGC
*
14045235 CTAAGCCAACCGACGAAACGA------------GCGGGCGGGCACTACACCGGCCAGAGAGACGG
194 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGG
* * * * * **
14045288 GATGCGCAAGTCGTGTATTGATAGGGTGGTAGGTGGGCTTAGGCGCATCTTCATATTTCTGTGTG
259 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* *
14045353 CCAATGCCATTTTTAAGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
324 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
** * * * * * * * *
14045418 CAGCAAAACAACTCATTTTCTATTTTTCATGCTTTTCGAAACTTTTTACGGTTTGGGATTTTTTA
389 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTA
* *
14045483 AAATTTTTTTGGAAGGTA-TTTTGGCCCCAAACTTGGTAGACGTGGTCCTTGTATTTTTTTTGGC
454 AAA-TTTTTTGGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* *
14045547 ATGCACAAAAATATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
517 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
14045612 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
582 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
*
14045677 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTACCAGCACC
647 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * *** *
14045742 CATCGCACATCATGTGCGCACACCCCCCCCGGCACCCCCAATTACCGGAACCCCAATGCTG-CTG
712 CATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-G
* * * * * * *
14045806 GTTAGGTTCTCCGACGATGGTCTGGCGATGGTGCCCCGACAAAGAAAAATACGGCACCAGCACTT
774 ATCAGGTTCTCCGA-GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACAT
* ** * *
14045871 GCTCGAGCCCAGCATGTGCTATCGCAACCCTTGGT-CTGA
838 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
** *
14045910 TTTGAT-CTTAGACTGGGAATGAACTCCGTATGCATAAGTCAACCCACGAAACGAGCGTGCGGGC
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * *
14045974 ACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTTGGGTCCCCCTCTGCGTGCTG
66 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTA
* ** * * *
14046039 TCGATCCTGCTATCGCAACCCTCGATCTGG-TCTGATCTTAGACTGGGAGTGAACTCCGTCTGCC
131 CCGATCCTGCTGCCGCAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCC
* * * *
14046103 TAAGCCAACAGACGAAACGA--------GCGGGCGGGCAGGCATTACGCCGGCTAGAGAGACGGG
195 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14046160 ATGCGCAAGCTGGGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATTC
260 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
*
14046225 CAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
325 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* **
14046290 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTTGGATTTTTTAA
390 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAA
* * *
14046355 ATTTTTTTTGGAAGGA-TCTTTGGCCCTAAACTTGGTATACGTGATCCTTGTATTTTTGTTGGCA
455 A-ATTTTTTGGAAGGAGT-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
14046419 TGCACAAAAAAAATCAGCTAAAAACTCGAAGTGTACATGATTTTGCGACCATTTGAAAAAAGTGT
518 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * * *
14046484 CCCCATTTCAGGCACTTTAAAGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCT-TTTTAGG
583 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
14046548 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCC
648 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* *
14046613 ATCGCACATCATGTGCGCACACCCCCCGACCCCCCGGCCCCCCGGCCCCCCCGATCATCGAAACC
713 ATCGCACATCATGTGCG--CA-----C-A--------CCCCCCGGCCCCCCCGATCGTCGGAACC
* * * * * *
14046678 CTAATACCGTCGGTCAGGTCCTCCAGCGATGCTCCGACGATGGAGCCCCGACGAAGAAAAATACG
762 CCAATGCCGTCGATCAGGTTCTCC-GAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACG
* ** *
14046743 GCACCAGCACATGCCCGAGCCCAACATGTGCTGCCATAACCCTCGGT-TTGG
826 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* * * * * * *** * * *
14046794 TGCGAT-CTTAGACTGGGAATTAACTCTGTATG-CTTAGACTAGGAATGAACTCCGTATGCTTAG
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA--ACG-A-GCGT-G
* *** * * * * * * ** * * *
14046857 ACAGGAATTAACTCCGTATGCTTAGACTGGGAATTAACTCCGTATGC-TTAGACTGGGATTGAAC
61 -CGGGCGCTCA-GCCG---GC-CAGA--GGG-------GCGGGATGCGCAAGCCGGGGATCG-A-
*** *** ** * * * ** * * * * * ** * * **
14046921 TCCATATGCCAAAGTCAACCTACGAAATGAGCGTGCGGGCGC-TCAGTCGGCCAGAGGGGCGGGA
109 T-CGGGT-CC-CCCTCTGCGTGC-TACCGATCCTGCTGCCGCAACCCTCGGTC--TGGTTC--GA
* * * * * * * * * ** * ***
14046985 TGCGTAAGCCGGGGAATGATCGGGTCCCCCTCTGCGT--G-CTATCGATTCTGCTAC-CGCAACC
166 T-C-TTAGACTGGGAATGAAC---T--CCGTATGCCTAAGCCAACCGA--C-GAAACGAGCGGGC
**** ** * * * * * **** * * ***
14047046 CTTAGTCCAGTC-TG-ATCTTA-GACTGG-GA-ATGA-ACTCTTTACACCTAAGCCAACCGAT-G
221 GGGCGGGCGGGCGGGCA-C-TACG-CCGGCCAGA-GAGACGGGATGC-GC-AAGCC-GTGGATCG
* * ** * ** * *** * * *
14047104 AAACGAGTGGGCGGGTGGG--TGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA-GTCATGG
279 ATA-GGGT-GGTAGGTGGGTTTAGGCAC-A--TC-TTCATA-TTTCTGCATGC-CAATGCCAT--
* *** *
14047166 ATCGGTAGGGTGGTAGGTGGGTT-TAGGCACATCCTCATATTTTTGTGTGCC--AATGCCATTTT
334 -T---T----T--TA--TGGCTTGTA---A-AT--TCATA-CAATG-GTCCCTTAA-GCC---TT
* * * *** * ** ** * *****
14047228 TATGGCTTGTAAATTCTTACAATGGTCCCTTAAG-C-C-TTCACGTGAAGTTTCATGGCAAGATG
375 CA---C--GTGAAGT-TT-C-ATGG--CAAGACGACTCGTTTTC-T-ATTTTTCA-CGATTTTTG
** * ** ***
14047290 ACTCGTTTT-CTATTTTTAATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
427 AAACTTTTTGC---GGTTCGGGA-TTT-------------------------TTTAAAATTTTTT
* * * * *
14047354 CGGAAGAAGTTTTGGCCCCAAATTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATCCACAAAC
463 -GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * ** *
14047419 AAATTCAGCTGAAAACTCGAAGTGTACAAGATTTTGTCATCATTTTCAAAAAGTGTCCCCAATTC
527 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14047484 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGGTGAG
592 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
14047549 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTACCAGCACCCATCGCACAT
657 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
14047614 CATGTGTGCACACCCCCCCGACCCCCCCGATCGTCGGAA--CTAATGCCGCCGGTCATGTTCTCC
722 CATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCAGGTTCTCC
* * ** *
14047677 GGCGATGCTCTGACGATGGTGCCCCGGA-GAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCA
786 -GAGATGCTCCGACGATGGTGCCCC-GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
* *
14047741 GCATGTGCTGTCACAACCTTCGGTCCTGTCCGATCTTATACTAGGAATG
849 GCATGTGCTGCCGCAACC--C--T-C-G---G-TC-----CT--G---G
* * * *
14047790 AACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGT
1 ---TCC-GATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * *
14047855 GGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGT
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * ***
14047920 GCTACCAATCCTGCTGCCACAACCCTCGGTC-CAATCGAATCTTAGACTGGGAATGAACTCCGTA
127 GCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCG-ATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
14047984 TGCCTAAGCTAACCGATGAAACGAGCGGGCGGGCGGGGGGGCGAGCACTACGCCAGCCAGAGACA
191 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGA
* * *
14048049 CGGGATGCGCAAGCCGTGGATCGATAGGTTGGTAGGTAGGTTTAGGCACATGTTCATATTTCTGC
256 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
14048114 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
321 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
**
14048179 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTT
386 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTT
* * *
14048244 TTAAAATTTTTTCGGATGGAGTTTTGGCCCCAAACTTGGTTGACGTAATCCTTGTATTTTTGTTG
451 TTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
14048309 GCATGCATAAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
515 GCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * *
14048374 GTGTCACCATTTCAGACACTTTAATGGCTACTGGCAGCGAACCTGTAAAATCTAAAATGCTCTTT
579 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * *
14048439 AAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGAATAGGGAGCCAATATAAGGGCCAAGTACCAGC
644 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * ** * *
14048504 ACCCATCGCACATCATGTACGCACATCCCCCCGACCCCCCCGATCACCGAAACCCCAATGCCGCC
709 ACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC
* * * * * *
14048569 GATAAGGTCCTCCAACGATGCTCCGATGATGGAGCCCC-AGCGAAGAAAAATGCGGCACCAGCAC
773 GATCAGGTTCTCCGA-GATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATACGGCACCAGCAC
* *
14048633 ATGCCCGAGCCCAGTATGTGCTACCGCAACCCTCGGTCC-GG
836 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* * **
14048674 TCCGAT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGTTC
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
** * * * *
14048738 GCTCAGCCGGCCAGAGGGGCGAAATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGTGTGCTT
66 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTA
* *
14048803 CCGATCCTG-TGACCACAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGATCTCCGTATGCC
131 CCGATCCTGCTG-CCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * *
14048867 TAAGGCAATCGACGAAACGAGTGGGCGGGCGGGCGGGCGAGCACTACGCCGACAAGAGAGACGGG
195 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14048932 ATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGGGTTTAGGCTCATCTTCATATTTTTGCGTGC
260 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* * *
14048997 GAATTCCATTTTTATGGCTTGTAAATTCATACAATGTTCCCTTAAGCCTTCACGTGAAGTTTCAT
325 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
14049062 GGCAAGACGACTCATTTTCTATTTTTCACGATTTTTAAAACTTTTTGCAGTTCGGGATTTTTTAA
390 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAA
* *
14049127 AACTTTTTTGGAAGGAGTTTTGGCCCCAAACTAGGTAGACGTGATCCTTGTATTTTTGTTGGTAT
455 AA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* *
14049192 GCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATC
519 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
14049257 CCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGG
584 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGG
*
14049322 GGGTGTAAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
648 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * *
14049387 ATCGCACATCATGTGCGCACACCCCCCAGGCCCCCCCGATCATCGGAACCCCAATGCCGGCAATC
713 ATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATC
* * * * **
14049452 AGGTTCTCCGGAGATGCTCGGGCGATGGTGCCCCGACGAAGAAGAATACGGCACCAACACATGGT
777 AGGTTCTCC-GAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCC
* ** * *
14049517 CGAACCCAGCATGTGCTGCCGTGACCATCGGT-CAGG
841 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* * * * * * *
14049553 TCTGAT-CTTAGACTGGGAATGAACTCCTTATGCATAAGTCAACCCAAGAAACAAGCGTTCGGGT
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * *
14049617 GCTCAGCCGGCAAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTTCCTCTCTGTGTGCTA
66 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTA
* * * *
14049682 CCGATCCTGTTGCCGCAACCCTCAGTCTGGTAT-GATCGTAGATTGGGAATGAACTCCGTATGCC
131 CCGATCCTGCTGCCGCAACCCTCGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * *
14049746 TAAGCCAACCGACGAAACGA------------GCGGACGGGCACTACGTCGGCCAGAGGGACGGG
195 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * * * *
14049799 ATGCGCAAGCCATGTATTGATAGGGTGGTAGGTGGGCTTAGGCGCATCTTCATATTTCTACATGC
260 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
14049864 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
325 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * * * *
14049929 GGCAAAACAACTCATTTTCTATTTTTCATGACTTTCGAAACTTTTTACGGTTCGGGATTTTTTAA
390 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAA
* * **
14049994 AATTTTTTTGGTAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGGTCGATGTATTTTTGTTGGCA
455 AA-TTTTTTGGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* *
14050058 TGCACAAAAAAATTCAGCTAAAATCTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
518 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* *
14050123 CCCCATTTCAGACACTTTAATGGCTATTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
583 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* **
14050188 GGGTGTGAGTTCTCGAGGTTTGATTAGGGATAGAAGGCCAATATAAGGGCCAAGTACCAGCACCC
648 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* *
14050253 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGTAACCCCAAT---GTC-A-CT
713 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCA
* * * * * * *
14050313 GG---T-C-AGGTTCCCCGGCGATGGTGCCCCGACAAAGAAAAATACGGCACCAGTACTTGCCCG
778 GGTTCTCCGAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
* *
14050373 AGTCTAGCATGTGCTGCCGCAACCCTCGGTTCGATCCGATCTTAGACTGGGAATG
843 AGCCCAGCATGTGCTGCCGCAA-CC-C---TCG----G-TC-----CT--G---G
* * *
14050428 AACTCCGTATGCTTAGACTGGGAATGAACTCCCTATGCCTAAGTTAACCCACGAAACGAGCGTTC
1 ---TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
14050493 GGGCGCTCAGCCGGCCAGAGGGACGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTTCTACAT
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * * * * * *
14050558 GCTGCCAATCCTGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGATTGGGAATGAACTCTGTAC
127 GCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTAT
** * * * * *
14050623 GCCTAAGCCAATAGACGAAACGAGCGGACGGGCGGGCGAGCGGGTACTACACCGGCCAGAGAGGC
192 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * *
14050688 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCATATCTTCATATTTCTACA
257 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
*
14050753 TGCCAATGCCATTTTTATGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
322 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * ** *
14050818 CATGGCAAGACGACTCGGTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGGGATTTTT
387 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * * * *
14050883 TAAAATTTTCTTGGATGGAGTTTTGGTCCCAAACCTGGTAGACTTGGTCCTTGTATTTTTGTTGG
452 TAAAATTTT-TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * * * *
14050948 CATGGACAAAAAAATTCAGCCAAGAACTTGAAGTGTACAAGGTTTTGTGACCATTTGAAAAAAGT
516 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
14051013 GTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCACAAATGCTCTTTAA
581 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
14051078 GGGAGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
646 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * *
14051143 CCATCGCACACCATGTGCACACACCCGCCCGGCCCCCCCGATCGCCGTAACCCCAAT---GTC-A
711 CCATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGA
* * * *
14051204 -CAGG---T-C-AGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGC
775 TCAGGTTCTCCGAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGC
*
14051263 CTGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGATCCGATCTTAGACTGGGAATG
840 CCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC-G----G-TC-----CT--G---G
* * *
14051321 AACTCCATATGCTTAGACTAGGAATGAACTCCCTATGCCTAAGTCAACCCACGAAACGAGCGTGC
1 ---TCC-GATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * *
14051386 GGGCACTCAGCTGGCCAGAGTGGCGGGATGCGCAAGTCGGGGATCGGTCAGGTCCCCCTCTGCGT
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * * * *
14051451 GCTACCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGATTGGGAATGAACTCTGTAT
127 GCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTAT
* * ** ** *
14051516 GCCTAAGCCAATCGAAGAAACGAGCGGGCGACCGGGCGACCGGGCACTACACCGGCCAGAGA-AG
192 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGA-
**
14051580 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAT
256 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
14051645 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTT
321 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
** **
14051710 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCCATTCGGGATTTT
386 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTT
* * * *
14051775 TAAAAATTTTTTTGGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGGTGCTTGTATTTTTGTTG
451 TTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * *
14051840 GCATGCACAAAAAATTTCAGCCAAAAACTCGAAGTGTCCAATATTTTGTGACCATTTGAAAAAAG
515 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * *
14051905 TGTCCCCATTTCAAACACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTCA
580 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * *
14051970 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-AGGGCCAATATAAGGGGCAAGTGCCAGCA
645 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * **
14052034 CCCATCGCACATCATGTGCGCACACTCCCCGACCCCCCCGATCG-CTGGAATGCCAATGCCGTCG
710 CCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCG
* ** *
14052098 ATCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGTGAAGAAAAATGA-GGCAGCAGCACA
774 ATCAGGTTCTCCGA-GATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT-ACGGCACCAGCACA
* * * **
14052162 TGCTCAAGCCCAGCATGTGCTACCGCAACCCTCAATCC-GG
837 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* *
14052202 TCTGAT-CTTAGGCTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * ** *
14052266 GCTCAGTCGACCAGAGGGGCGGCATGC-CTAAGTAGGGGATCGATCGGGTCCCCCTCTGTGTGCT
66 GCTCAGCCGGCCAGAGGGGCGGGATGCGC-AAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * ** *
14052330 GCTGATCCTACTGTCGCTACCCTCGGTCTGGCCCGATCTTAGACTGGGAATGAACTCCATATGCC
130 ACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCC
* ** * *
14052395 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGAGCGGGCAAGACGCCGGCCAGAAAGGC-GG
195 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14052459 ATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGG
260 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* *
14052524 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTGATGTGAAGTTTCAT
325 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * * *
14052589 GCCAAGATGACACGGTTTCTATTTTTCATGATTTTTGAAACTTTTTTGCGGTTAGGGATTTTTTA
390 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTTGCGGTTCGGGATTTTTTA
* **
14052654 AAATTTTTTCGGAAGAAGTTTTGGCCCCAAACTTATTAGACGTGATCCTTGTATTTTTGTTGGCA
454 AAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
14052719 TGCATAAAAAAATTCAGCTAAAAACTC--AGTGTACAAGATTTTGGGACGATTTGAAAAAAGTGT
518 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * *
14052782 CCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTATAAAATCTCAAATGCCCTTTAAGG
583 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
14052847 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
648 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * ** * *
14052912 ATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCGTCAGAACCTCAATGCCACCGCTT
713 ATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATC
* * * * * * *
14052977 AGGTTCTCTGGCGATGCTCCGGCGATGGTGCCCTGACGAAAAAAAATGCAGCACCAGCACATGCC
777 AGGTTCTC-CGAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCC
**
14053042 CGAGCCCAGCATGTGCTGCCAAAACCCTCGGTCTGGTCTGATCTTAGTCTGGG
841 CGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC--G---G-TC-----CT-GG
* * *
14053095 AATAAACTTCGTATGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGC
1 --T---C--CG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* ** * * *
14053160 GTGCGGGCGCTCAGCCGGCTAGAGGGGCAAGATGCGCAAGCCGGGGATTG-GCTGGGTCCCCCTA
58 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTC
* * * *
14053224 TGCGTGCTGCCGATCCTGCTGCCACAACCCTCAGTCTCG-TCTGATCTTAGACTGGGAATGAACT
122 TGCGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACT
* * *
14053288 CCGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGCCGACCAG
186 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAG
14053353 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
251 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
*** * * *
14053418 TCTATGTGCCAATGCCATTTTTATGGCTAGTAAATTCATGCAATGGTCCCTTAACCCTTCACGTG
316 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * *
14053483 AAGTTTAATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
381 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGG
* * **
14053548 ATTTTTCAAAAATTTTTTGGAAGGAGTTTTGGCCCCAAAATTCATAGACGTGATCCTTGTATTTT
446 ATTTTT-TAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
14053613 TGTTGGCATGCACAAAAAAAATCAGGTAAAAAATCGAAGTGTACAAGATTTTGCGACCATTTGAA
510 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * * *
14053678 AAAAGTGTCCCCATTTTAGACACTTTAGTAGCTACTTGCAGCAAACCTGTAAAATCTCAAATACT
575 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
14053743 CTTTAAGGGGGTGTGAGTTCTCGAGGATTGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTAC
640 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
** * **
14053808 CAGCACCCATCTTACATCATGTGCGCACACCCCTCGG-CCCCCCGATCACCGGAACCCCAATGCC
705 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
** * * * * ** *
14053872 ACCGATCAGGTTCTCCGGTGATGCTCCGGCGATGGTGGCCCGGCGAAGAAAAATGTGGGACCAGC
770 GTCGATCAGGTTCTCC-GAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGC
* * * **
14053937 ACATGCTCTAGCCCAGCATGTGCTGTCAAAACCCTCGGTCCGGTCTGATCTTAGACTGGG
834 ACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G---G-TC-----CT-GG
*
14053997 AATTAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGC
1 -------TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * **
14054062 ATGCGGGCGCTCAGTCGCCCAAAGGGGCGAGATGCATAAGCCGGGGATCGATCGGGTCCCCCTCT
58 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCT
** * *
14054127 GCGTGCTGTCGATCCTGCTACCGCAACCTTCGGTCTGG-TCTGATCTTAGACTGGGAATGAACTC
123 GCGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTC
* * * * * *
14054191 CGTATGCCTAACCCAACCGACGAAACGAGCGAGTGGGCGGGCGGGTGGGCACGACGCTGGCCAGA
187 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGA
*
14054256 GAGATC-GGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
252 GAGA-CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
14054320 TCTGTATGCCAATGCCATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
316 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * **
14054385 AAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTGCGATTTTGG
381 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGG
14054450 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
446 ATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * *
14054515 TTTTGGCATGCCCAAAAACAA-TCAACTAAAAACTCGAAGTGAACAAGATTTTGTGACTATTTGA
510 TGTTGGCATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
14054579 AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGC
574 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
14054644 TCTTTAAGGGGGTGTGACTTCCCGAGGTTTGGA-GAGGGATAGGGGGCCAATATAAGGGCCAAGT
639 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTT-GATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * *
14054708 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGCCAGAACCTCAATG
703 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * *
14054773 TCGTCGATCAGG-T-T-C----T-CT--GACGA---TGCTCCGACGAAGAAAAATACGGCACCAA
768 CCGTCGATCAGGTTCTCCGAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAG
*
14054825 CACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAGTCCTATGTTAGATTGGG
833 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-G----GTCC----------T-GG
* * * *
14054886 AATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAATCAACACACAAAACAAGC
1 --T---C--CG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * ** * *
14054951 GTGTGGGCGCTCAGCCGGCCAGA-GGG-GGGATGCACAAGATGGGGATCG-GCTGGATCCCCCTC
58 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTC
* * * * ** * * * *** * * *
14055013 TACGTGCTGCCAATCCTACTGTTGTAACCTTCAGTCCAATTCGATCTTTGACTAGGAATAAACTC
122 TGCGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTC
* * * * *
14055078 CGTATGCCTAAGCCAACCGACGAAATGAGTGGGCAGGCAGGCGGGCGGGCACTACGTCGGCCAGA
187 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGA
* *
14055143 GAGACGGGATGCGCAAGCTGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
252 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*** * *
14055208 CTATGTGCCAATGCCATTTTTGTGAG-TTGTAAATTCATACAATGGTCCCTTAAGTCTTCACGTG
317 CTGCATGCCAATGCCATTTTTATG-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * * *
14055272 AAGTTTCATGGCAAGACGACTAGTTTTTTATTTTTCACAATTTTTGAAACTTTTGGCAGTCCGGG
381 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGG
* * * *
14055337 ATTTTTTAAAATTTTTTCGAAAGGAGTTTTTGCCCCAAACTTGGTAGATGTGATCGTTGTATTTT
446 ATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
14055402 TGTTGGCATGCACAAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGA-TTTGTGACCATTTGA
510 TGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
14055466 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCAGCAAACCTGTAAAATCTCAAATGC
574 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
14055531 CCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAGTATAAGGGCCAAGTA
639 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* **
14055596 CCAGCACCCATCGGACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTTTGAACCCCAATGC
704 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGC
* * * * *
14055661 CGTCGGTTAGGTTCTCCGGCGATGCTCC-AGCGATGGTGCCTCGGCGAAGAAAAATACGGCACCA
769 CGTCGATCAGGTTCTCC-GAGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATACGGCACCA
* * * * *
14055725 ACACAAGCCCGA-CCCAGCATGTGCTACCGTAACCCTCGGTCTGGTCTGA
832 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC----CTGG
14055774 TCTTAGACTAGGAATGAACTTCGTATGTTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACC
1 TC-----C---G-ATG--C-T--TA-G-----ACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * *
14055839 CATGAAATGAGCGTGCGGGCGCTCAACCGGCCAGAAGGGTGGGATGCGCAAGCCGAGGATCGACC
46 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC
* * * * * * * *
14055904 GGGTCCCCCTCTGCTTGCTAGCGATCCCGCTGCCGCAACCCTTGGTCCGGTCCAATCTTCGACTG
111 GGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTG
* * * *
14055969 GAAATGAACTTCGTATGCCTGAGCCAACCGACGAAACGAGCGGGCGGGCGAGCGGGCGGGCACTA
176 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTA
*
14056034 CGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
241 CGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* *
14056099 TCTTTATATTTCTGCATGCCAAAGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
306 TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
14056164 CCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTGCTATTTCTCACGATTTTTGAAACTTTTT
371 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
* * * *
14056229 ACGGTTCGGGATTTTTTAAAAATTTTGTCGAAAGGAGTTTTGGACCCAAACTTGGTAGACGTGAT
436 GCGGTTCGGGATTTTTT-AAAATTTT-TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * *
14056294 CCTTGTATTTTTGCTAGCATGTACAAAAAGAA-TCATCTAAAAACTCGAAGTGTACAAGATTTTG
499 CCTTGTATTTTTGTTGGCATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
14056358 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
563 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
14056423 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAT-ATGGGATAGGGGGCCAATAT
628 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGGATAGGGGGCCAATAT
* ** *
14056487 AAGGGCCAAGTACCAGCACCCGTCGCACATCATGTGCATACACCCCCTCGGCCCCACCGATCGTC
692 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGTC
* * * *
14056552 GAAACCCCAATGCCG-CTGGTCAGGTTTTCCAATGATGCTCCGACGATGGTGCCCCGACGAAGAA
756 GGAACCCCAATGCCGTC-GATCAGGTTCTCCGA-GATGCTCCGACGATGGTGCCCCGACGAAGAA
* * * * *
14056616 AAATACGGCTCCAGCACATGCTCGAGCCCAGCATGTGCAGTCACAACCCTCGGTCCGATCCGATC
819 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-CG----G-TC
14056681 TTAGACTGAGAATG
874 -----CT--G---G
* * * * *
14056695 AACTCCGTATGCTTAGACTAGGAATGAACACTGTATGCCTAAGTCAACCCATGAAACGAGCGTGT
1 ---TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
14056760 GAGCGCTCAGCCGGCCAGGGGGGCAGGATGCGCAAGCCGAGGAT---T--GG------TC-G-G-
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * * *
14056811 GC--CC---CCT--T----CAA---TC---C-GATCCAATCTTAGATTGGGAATGAACTCCGTAT
127 GCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTAT
*** * *** *
14056858 GCCTAAGCCAACCGACGAAACGAATAGGCGGGCGAGCGGGCGAAAACTACACCGGCCAGAGAGAC
192 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* *
14056923 GGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTCTAGGCACATCTTCATATTTCTGCA
257 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
*
14056988 TGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
322 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * ** * *
14057053 CATGGCAAGACGACTTGTTTTCTATATTTCACGATTTTTGAAACTTTTTATGATTCGAGATTTTT
387 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * **
14057118 TAAAATTTTTACGAAATTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
452 TAAAATTTTT-TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * *
14057183 CATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTCTAACCATTTGAAAAAAGT
516 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
14057248 GTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTATAATCTCAAATGCTCTTTAA
581 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
14057313 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCAC
646 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * *
14057378 CCATTGCACATCATGTGCGCACACCCCCTCGGCCACCCCGATCGCCGGAACCCCAACT-CCGTCG
711 CCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGTCGGAACCCCAA-TGCCGTCG
* * * * * **
14057442 GTCAAGTTCT-CGGGCAATGCTCTGACGATGGTGCCCCGACGAAGAAAAATGCAACACCAGCACA
774 ATCAGGTTCTCCGAG--ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACA
* * * **
14057506 TGCCCGAGCCAAGCATGTGCTGCTGCCACCCTCAAT-CTGG
837 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* * * *
14057546 TCCGAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGACAACCGATGAAACGAGCGGGCGGGC
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * * * ***** *
14057610 ACT-ATG-CAGCCAGAGAGACAGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAG
66 GCTCA-GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAT--CG-GGT--CCCCCTCT--
* ** * * * *** * ** *
14057673 GCAGATG-TTCAAATTTCTG-TG-TGCCAATGCCTTTTTTATGGCTT-GTAAATTCGTAC----A
123 GC-G-TGCTACCGA-TCCTGCTGCCG-CAA--CCCTCGGTCTGG-TTCG-ATCTTAG-ACTGGGA
** * * * * * * ** ** * ** **** ******
14057730 ATGGTCT-CGTAAGCCT---TC-ACGTGAAGTTTAATG-GCAAGATGACTTGTTTTCTATTTTTC
179 ATGAACTCCGTATGCCTAAGCCAAC-CGACG--AAACGAGCGGGCGGGCGGGCGGGCGGGCACT-
* ***** * * ** * ** ** ** * **** * * *
14057789 ATGATTTTC-GAAACTTTTTACGGTTTG-G-GA-CTTTTTAAAGTTTTTTTGGAAGG-AGTTTTA
240 ACGCCGGCCAGAGA-----GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * * ** ** * * * * * * * * *
14057849 GCCCCAAACTTGGTAGATGTG-AT-CC-TTG-TATTTTTTTTTGCATGCAAA---AAAAAAT--T
300 GGCAC-ATCTTCATATTTCTGCATGCCAATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGT
* * ** * ** * * * *** ** * ***
14057905 CAGCTAAAAAC-TCTAAGTGTACAAGATTTTGTGACCATTTGA-AAAAAGTGTCCCCATTTCAGA
363 C-CCTTAAGCCTTC-ACGTG---AAG-TTTCATG-GCA--AGACGACTCGT-TTTCTATTTTTCA
** **** *** * * ** * * * * * **
14057968 C-ACTTTAATTGCTACTGGCAGC-AACCTGTATAATCTCAAATGCCTCTTT-AAAGGGGTCGTGA
418 CGA-TTT--TTGAAACTTTTTGCGGTTCGGGATTTTTTAAAAT---TTTTTGGAAGGAGTTTTG-
* ** * * **** * * ** * * *****
14058030 GCTCTCAAGGGTTTG-ATGA-GGGATAGGGGGCAATTAAG--GGCAAGTACCAGCGCCCA-TC-G
476 GC-CCCAA-ACTTGGTA-GACGTGAT-CCTTGTATTTTTGTTGGCATGCA-CA-AAAAAATTCAG
* * * * **** * **** **** * *** *
14058089 -T--ACA-TC-ATGTGGGCCACACGCCCCTG-GCCCGCCCG-ATGCCG-GATACCCACCGCCG-C
535 CTAAAAACTCGAAGT--G-TACAAGATTTTGTGACCATTTGAAAAAAGTG-TCCCCATTTCAGAC
** * * ** * * *** * * **** ** * *
14058145 -CGGTCA--G-TTCTCGGCGATGC-TCCCGGGATGGTGCCCGCAACAAG--AAAAAATACGAGCG
596 ACTTTAATGGCTACT-GGC-A-GCAAACCTGTAAAAT---CTCAA-ATGCTCTTTAA-GGGGGTG
** * * * *** * * * * * * * *
14058203 CCAG--CACAATCGCCCGAAGCAAGCAT-GTGGCTGCCACATACCCTCGATCTGGTCCGA-TTCT
653 TGAGTTCTCGA-GGTTTGATG-AGGGATAG-GG-GGCCA-ATA---T--A--AGGGCCAAGTAC-
* ** * * * * * ** *** ** * *
14058264 TAG-ACTGGGAAT-GAAC-TCCGTATGCGTA-ACCCAACCGATGAAGCGAGCGGGCGGGCGG-GC
705 CAGCAC---CCATCGCACAT-CATGTGCGCACACCC-CCCG--G-CCCCCCCGATC-GTCGGAAC
* * * * * * * * * * *
14058324 GGGCACTACGTCGGCTAGAAAGGCAGGATGC-ACAAGCTG-T-TGATCGATAGGGTG----GTA-
761 ---CCCAATG-CCG-TCG--A-TCAGG-TTCTCCGAGATGCTCCGA-CGAT--GGTGCCCCG-AC
** **** * * ** * * * ** * * *
14058381 GGTG-GGTTTA-GGCA-CATGTTCAAATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATT
813 GAAGAAAAATACGGCACCA-G--CACA-TGC-CCGAGCCCA-G-CA-TGTGCT-GC-CG-CAA-C
*
14058443 CATACAATGGTGCCTTGGG
866 CCT-C---GGT-CC-T-GG
* * * * ** ** **** *
14058462 CCTTCACGTGAAGTTTA-A-TGGCAA-GACGACT-TGT-TTTCTATTTTTCATGATTTTCAAAAC
1 ---TC-C--GATGCTTAGACTGGGAATGA--ACTCCGTATGCCTA--AGTCA--ACCCACGAAAC
**** * * * ******* * * *** * ** *
14058522 -TTTTTTCGGTTCG-TGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAGATTGGTAGA
54 GAGCGTGCGG-GCGCTCAGCCGGCCAGA-------GG--GGCGGGAT-G-CGCAAG-CCGG-GGA
** ***** * * *** * * * *
14058585 -CGTTATCCCTGTATTGTTATTGGCATGCTCAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAG
105 TCG--AT-CGGGTCCCCCT-CT-GCGTGCT---ACCGATCCTGCT----GC-C-----G--CAAC
** * * * * * ** * *
14058649 ATTTGTGACCATTCGAAAAAAGTGTCCCCATTTTAGACAGTTTAATG-GCTACTGGTA-GCAAAC
150 CCTCG-G-TC--T-G------GT-T--CGATCTTAGACTG-GGAATGAACT-C-CGTATG----C
* ** * ** * * * *
14058712 CTGTAAAATCTCAAATGCTCTTTAA-G-G-GGGTGTGAGTTCTCGAGGTTTGATGAGGG-A-TA-
194 C--T--AAGC-CAACCG-AC-GAAACGAGCGGGCG-G-G----CG-GG--CG-GGCGGGCACTAC
** * * * * * ** * * * ********
14058771 GGGGGCCA-ATATAAGGGCCAAGTAC-CAGCACCCAACGCA-C-ATCA-TGTGCGCACACCCCCC
242 GCCGGCCAGAGAGACGGG---A-TGCGCA--AGCC-GTGGATCGAT-AGGGTG-GTAGGTGGGTT
* * * ** *** * ** * * * ** **
14058831 CAGCCCCCCCGATCGACGA-AACCCT-AATGCCACCGGTCAGGTTCTCCGGCGATTGTCCCCCGA
298 TAG---GCAC-ATCTTC-ATATTTCTGCATGCCA-ATGCCA-TTTTTATGGC--TTGT----AAA
*** * * * ** *** ** * * * * * *
14058894 CGAAGAAAAATGTGGCACCAGCACATGCCCGAACCCAGCAGGTGC-TGCCGTA-AC-CCTCGGTC
350 TTCA-TACAATG-GTC-CC-TTA-A-GCCTTCA-CGTGAAGTTTCATGGC-AAGACGACTC-GT-
** * *** * * * * * * * * **
14058956 CGATCTGA-TCTT-A-GACTGGAATG-AACTCCGTATGC-CTAGACTGGA----ATGAACTTCGT
405 -TTTCT-ATTTTTCACGA-T-TTTTGAAACT--TTTTGCGGT--TCGGGATTTTTTAAAATTTTT
** **** * * * * * * * * **** ** *
14059012 ACGCCTAAG--TTGACCCACAAAATGAGCGT-GCAGGCGCTCAGTTGGCCA-GAGGGGCGGGATG
462 TGGAAGGAGTTTTGGCCC-CAAACT-TG-GTAG-ACGTGATC-CTT-G-TATTTTTGTTGGCATG
* **** * **** * * ***
14059073 CGCAAGCCGGGGA-TCGACCGGGT-CCCCCTCTGCATGCTGT-C--GATCTTGCT-ACCGCAACC
520 CACAA---AAAAATTC-A---GCTAAAAACTC-G-AAG-TGTACAAGATTTTG-TGA-C-CATTT
*** **** ** ** * * ** * *
14059132 CTCAGTCCTGT-CTGATCTT-AG--ACTGGGAATGAACTCCGTATACCTAAGCCAACCAACG-AA
572 GAAAAAAGTGTCCCCAT-TTCAGACACT-TTAATG-GCTAC---TGGC--AGCAAACC--TGTAA
* ** * ** ** ** * ** * *
14059192 ACCCTCGGTCCGAT-CTGATCTT-AGACTGGAATGAACTC-CGTATGCCT-A-GACTGGA-A--T
627 A--ATC--TCAAATGCT-CT-TTAAG-GGGGTGTGAGTTCTCG-AGGTTTGATGA-GGGATAGGG
** * * * * * * ** * * * * ***
14059249 GAAC-TTCGT-A-CGCCTAAGT---TG-ACCCA---CA-A-AATGAGCGTGCAGGCGCTCAGTTG
683 GGCCAAT-ATAAGGGCC-AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCC
* * ** * ** * * * * * ** * * *
14059302 GCCAGAGGGGCGGGATGCGCAA-GCCGGGGATCGACCGGGTCCCCCTCTGCATG-T-TGTCGATC
745 CCCCGATCGTC-GGAACCCCAATGCC---G-TCGATCAGGTTCTCC-GAG-ATGCTCCGACGATG
* * **** * * * * * * ** * *
14059364 TTGCTACCG-C-AACCCTCAGT-CCG-ATCC-G-ATCTTAGACTGGGAATCAAC-TCCGT-ATG-
803 GTGC-CCCGACGAA-GAAAAATACGGCA-CCAGCA-CAT-GCCCGAG-CCCAGCAT--GTGCTGC
** *** *
14059420 CTTAGA--CT-GGGAATGAAC
860 CGCA-ACCCTCGGTCCTG--G
* * **** * ** ** * ** *** * *
14059438 TCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGTC-GGCCA-GAGGGGTGGG
1 TCCG-ATG-CTTAGACTGGGAATG-AAC-TCCGT--ATGC-CTAAGTCAACCCACGAAACGAGCG
* * * ** * *** * *
14059501 ATGCGTGTGAT--G-C-G-CA-AGCTG-GGGAT-CGATCGAGTCC--CCCTCTG-T-GTGCTGCC
59 -TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCG--CAAG-CCGGGGATC-GATCG-GGTCCC
** * * * * ** * * * **
14059554 GATCTGC-TGCCA-C-AACCTGCGGTCCTGTCTAA-TCTTAGACTGG---GA-ATGA-ACT--CC
118 CCTCTGCGTGCTACCGATCCTGCTG-CC-G-C-AACCCTCGGTCTGGTTCGATCTTAGACTGGGA
* * * * * * *
14059608 AT--A-TGCC-TAAG-C-AAACCGA-CGAAACG-AGCGAGCAGGCGGCCGGCCGGGC----ACT-
179 ATGAACT-CCGTATGCCTAAGCCAACCG--ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTA
* * * * * * * * *
14059660 CTGTCGGCCAGAAAGACGGGATGCACAAGCTGTGGATCAATACGGTGGTAGGTGGCTTGATGCAC
241 C-GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* **
14059725 ATCTTCGTATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
305 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * **
14059790 GCCTTCACGTGAAGTTTCATGGCAAGACAACTTGTTTTCTATTTTTCACGATTTTCAAAACTTTT
370 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* * * * * * * ** *
14059855 TACGGTTTGAGATTTTTTAAACTTTTTTCGAAAGGAGTTCTAGCATCAAACTTAGTAGACGTGAT
435 TGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * *
14059920 CCTTGTATTTTTGTTGGCATGCACAAAAAAGTTCAACTAAAAACTCGCAGTATACAAGATTTTGT
499 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
** * *
14059985 GACTGTTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAA
564 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
14060050 TCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
629 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* *
14060115 GGGCCAAGTACCAGCACCCATCCCACATCATGTGTGCACACCCTCCCGGCCCCCCCGATCGTCGG
694 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCCGATCGTCGG
* * * * * *
14060180 AACCCCAATACCG-CCAGTCAGGTTCTCCGACAATACTCCGACAATGGTGCCCCGACGAATAAAA
758 AACCCCAATGCCGTCGA-TCAGGTTCTCCGA-GATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* * * * *
14060244 ATATGGCATCAGCACGTGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCAGTCC-GG
821 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* * *
14060300 TCCGAT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGC
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * *
14060364 GGTCAGCCGGCCAGAGGGGCTGGATGCGCAAGCTGGGGATC-AGCCGGGTCCCCTTCTACGTGTT
66 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTGCT
* * * * * * * **
14060428 ACCGATCCTTCTACTGCAACCCTCAGTTTGGTCCGATCTTAGACTTGGAATGAACTAGGTATGCC
130 ACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * *
14060493 TAAGCCAACCGAC-AAA--A-----CGAGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGACGGG
195 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
14060550 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
260 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
*
14060615 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTAACGTGAAGTTTCAT
325 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * *
14060680 GGCAAGATGACTCATTTTCTATTTTTTACGATTTGTGAAACTTTTTACGGTTCGGGATTTTTTAA
390 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAA
* * *
14060745 AATTTTTTCGGAAGGTGTTTTGGTCCCAAACTTTGG-AGACATGATCCTTGTATTTTTGTTGGCA
455 AATTTTTT-GGAAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * * *
14060809 TGCATAAAAAAATTCAGCTAAAAGCTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTTT
518 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
*
14060874 CCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGG
583 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
14060939 GGGTGTGAGTTCCCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
648 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
** *
14061004 ATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGTCGGT
713 ATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGAT
* * ** * **
14061069 CAGGTTCTCCGAAGATGCTCCGATGATGGTGCTCCGGTGAAGAATAATGTGGCACCAGCACATGC
776 CAGGTTCTCCG-AGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGC
14061134 TCC-AGCCCAGCATGTGCTGCCGCAACCCTCAGTCCTGTCCGATCTTAGACTAGGAATG
840 -CCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G---G-TC-----CT--G---G
* * * *
14061192 AACTCCGTATGCTTAGACTGGGAATAAACTCCATATGCCTATGTCAACCCACGAAACGAGCGTAC
1 ---TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
** * * * * * * **
14061257 GGGCGCTCAGTTGGCTAAAGAGGCGGGATGTGCAAGTCGGGGATCG-GCTGGGTCCCCCTCTGTA
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCG
** * * * *
14061321 TGC-AGCCGATCCTGCTATCGTAACCCTCAG-CTCGGTTTGATCTTAGACTGGCAAATGAACTCC
126 TGCTA-CCGATCCTGCTGCCGCAACCCTCGGTCT-GGTTCGATCTTAGACTGG-GAATGAACTCC
* * * * *
14061384 GTATGCCTAAGCCAATCGATGAAACGAGCGGGCGGGCGAGCGGGCGTGCACTACGTCGGCCAGAG
188 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAG
* *
14061449 AGACGGGATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
253 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
** * *
14061514 TGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCATGTGAA
318 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* * * *
14061579 GTTTCATGGCAAGACGACTCGTTTTCTATTTTACATGATTTTTGAAACTTTTTACGGTTTGGGAT
383 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGAT
** **** * ** *
14061644 TTTTTAAAA-TTTTTCAAAATTCTTTCTGGCCCCGAACTTGGTATTTC-TGATCCCTGTATTTTT
448 TTTTTAAAATTTTTTGGAAGGAGTTT-TGGCCCCAAACTTGGTA-GACGTGATCCTTGTATTTTT
14061707 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
511 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* * * * *
14061772 CAAGTGTCCCCATTTAAGACACTTTATTGGCTACTGGCAGCAAACCTATAAAATCACAAATGCTC
576 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
14061837 TTTAA-GGGGTGTGAGTTCT-GAGGTTTGATTG-GGGATAGGGGGCCAATATAAGGGCCAAGTAC
641 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGA-TGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * *
14061899 CAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAAACCCAATGCC
705 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
* * * * * * * *
14061964 GCCGGTCAGGTTCTTCAGTGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCAGAACCAGC
770 GTCGATCAGGTTC-TCCGAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGC
* *
14062029 ACATGCCCCAGCCCAGCATGTGCTACCGCAACCCTCGGTTCAGTCTTATCTTAGACTGGG
834 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-G----G-----TC-----CT-GG
* *
14062089 AATGAACTTCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGC
1 --T---C--C-GATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * ** *
14062154 GTGCGGGTGCTCAGCCGACAAGAGGGGCGGGATTAGCAAGCCGGGGATAGA-CTGGGTCCCCCTC
58 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTC
* * * * *
14062218 TGTGTCCTGCCGATCCTGCTGCCGCAACCTTCGGTCTGG-TCTGATCTTAGACTGGGAATGAGCT
122 TGCGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACT
* * * * * *
14062282 CCGTATGCATAAGCTAACCGATGAAACGAGCAGGCGGGCGGGCGGGCGGACACTACGTCGGCCAG
186 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAG
14062347 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
251 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *** *
14062412 TTTATGTGCAAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
316 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * *
14062477 AAGTTTCATGGCAAGACAACTCGTTCTCTATTTTTCAGGA-TTTTGCAAACTTTTTGCGGTTCGG
381 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG-AAACTTTTTGCGGTTCGG
*
14062541 GATTTTTTAAAATTTTTTTGGAAGGAG-TTTGGACCCCAAATTTGGTAGACGTGATCCTTGTATT
445 GATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGG-CCCCAAACTTGGTAGACGTGATCCTTGTATT
* * * * * *
14062605 TTTTTTGGCATGCATAAAAAAAATCAGCCAAAAACTCAAAGTGTACAAGATTTTGTG-CCAATTG
508 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
14062669 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACTTGTAAAATCTCAAATG
573 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
14062734 CTCTTTAAGGGGCTATGA-TGTCTCGAGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAG
638 CTCTTTAAGGGGGTGTGAGT-TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * ** **
14062798 TACCAGCAGCCAACGCACATCATGTGCGCACACCCCCCCGGCCCCCCCCGATCACCGGAATTCCA
702 TACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCCGATCGTCGGAACCCCA
* * * * *
14062863 ATG-CGTCGGTCAGGTTCTCCGGCGATGCTCCCACGATGGTGCCCCGGA-GAAGAAAAATGCGAC
765 ATGCCGTCGATCAGGTTCTCC-GAGATGCTCCGACGATGGTGCCCC-GACGAAGAAAAATACGGC
* ** * *
14062926 ACCAGCACAAGCCATAGCCCAGCATGTACTGCCGTAACCCTTGGTCTGCTCCGATCTTAGACTGC
828 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC----TC-G----G-TC-----CT--
14062991 GAATG
876 G---G
* **
14062996 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAAAGTGC
1 ---TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * *
14063061 AGTCACTCAGTCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCACCTCTGCGT
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * * *
14063126 GCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTAT
127 GCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTAT
* * * * * ** * * *
14063191 GCCTAAACAAACTGACGAAACGAGCGGACGGGCAGATGGGTGGGCACTACGCCGACCAGAGAGTC
192 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * *
14063256 AGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTTTGCA
257 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
*
14063321 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTT
322 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * * *
14063386 CATGGCAAGACGACTCATTTTCTATTTTCCATGATTTTTGGAA-TGTTTTGTGGTTCGGGATTTT
387 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT-TTTTGCGGTTCGGGATTTT
* * * *
14063450 TTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCTTTGTATTTTTTTTG
451 TTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * *
14063515 GCATGCACAAAGAAAA-TCGGCTAAAAACACAAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
515 GCATGCACAAA-AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
*
14063579 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTT
579 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
14063644 AAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGC
644 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
14063709 ACCCATCACACATCATGTGCGCACACCCCCCCGACCCCCCCGATCATCGGAACCCAAATGACGTC
709 ACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC
* * *** * * *
14063774 GATCAGGTTCTCCGTTGATGCTCCGGCGATGGTGCCCCGGTAAAGAAAAATGCGGCACCCGCAGA
773 GATCAGGTTCTCCG-AGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACA
** * * *
14063839 AACCCGAGCCCAGCATGTTCTGCTGTAACCCTCAGTCCGATTCGATCCTAGACTATGAATG
837 TGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-CG----G-T-C----C--TG---G
* * * *
14063900 AACTCCGTATGCTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACACACGAAATGAGCGTGC
1 ---TCCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * *
14063965 GGGCGCTCAGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGGTCAGGTCCCCCTCTGTGT
62 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * ** * * *
14064030 GCTGCCGATCCTGCT-CTCGCAACCTTCAATTTGGTTTGATCTTAGACTGGGAATGAACTCTGTA
127 GCTACCGATCCTGCTGC-CGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
14064094 TGCCTAAGCCAATCGATGAAACGAACGGGCGGGCTGGAGGGCGGGCACTACGCCGGCCAGAGAGA
191 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGA
* * *
14064159 CGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGAGGGTTTAGGCACATCTTCATATTTCTAC
256 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * **
14064224 GTGCCAATGGCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGGGTTCACGTGAAGTT
321 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * **
14064289 TCATGGCAAGACGACTCCTTTTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCGGGATTTT
386 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTT
* *
14064354 TTAAAATTTTTGCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTG
451 TTAAAATTTTT-TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
14064419 GCATGTACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG-AAAAAG
515 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
14064483 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
580 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * * *
14064548 AAGGGGTGCGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTACCAGCA
645 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * *
14064613 CCCATCGCACATCATGTGCTCACACCCCCCTGGCCCCCCCGATC-ACTGGAACCCTAATGCCGTC
710 CCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTC-GGAACCCCAATGCCGTC
* * * * * *
14064677 GGTCAGGTTCTTCGACGATGCTCCGACGATGGTGCCCC-AGTGAAGAAATATACGGTACTAGCAC
773 GATCAGGTTCTCCGA-GATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATACGGCACCAGCAC
* * * * * *
14064741 GTGCCTGAGCCCAGCATGTGCTGTCGCAACCCTCGATTC-GA
836 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
* ** * *
14064782 TCCGAT-CATAGACTAAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGT
1 TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * * * *
14064846 GCTCAGTCGGCCAAAAGGGCGGGATGCGCAAGTCGGGGATCGGTCGGGTCCCTCTCTGCATGTTG
66 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTA
* * * * * * * * *
14064911 GCAATCTTGCTACCACGACCCTTGGTCCGG-TCTGATCTTAGACTGGGAATGAACTCTGTATGCC
131 CCGATCCTGCTGCCGCAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
14064975 TAAGCCAACCGATGAAACGA--------GCGGGAGGGTGGGCACTACTCTGGCCAGAGAGACGGG
195 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
*
14065032 ATGCGCAAGCCGTGGATCGATATGGTGG
260 ATGCGCAAGCCGTGGATCGATAGGGTGG
14065060 CCAGACTCGT
Statistics
Matches: 17513, Mismatches: 3146, Indels: 2297
0.76 0.14 0.10
Matches are distributed among these distances:
845 29 0.00
846 53 0.00
847 2 0.00
848 5 0.00
851 13 0.00
852 12 0.00
853 7 0.00
854 71 0.00
855 16 0.00
856 17 0.00
857 14 0.00
858 4 0.00
859 15 0.00
860 17 0.00
861 32 0.00
862 219 0.01
863 43 0.00
864 31 0.00
865 148 0.01
866 367 0.02
867 615 0.04
868 22 0.00
869 77 0.00
870 561 0.03
871 494 0.03
872 445 0.03
873 289 0.02
874 238 0.01
875 224 0.01
876 416 0.02
877 192 0.01
878 146 0.01
879 844 0.05
880 220 0.01
881 38 0.00
882 35 0.00
883 64 0.00
884 211 0.01
885 33 0.00
886 34 0.00
887 596 0.03
888 71 0.00
889 153 0.01
890 8 0.00
891 43 0.00
892 543 0.03
893 775 0.04
894 20 0.00
895 19 0.00
896 207 0.01
897 247 0.01
898 273 0.02
899 90 0.01
900 723 0.04
901 432 0.02
902 2157 0.12
903 1742 0.10
904 1150 0.07
905 349 0.02
906 230 0.01
907 22 0.00
908 13 0.00
909 4 0.00
910 4 0.00
911 7 0.00
912 3 0.00
913 15 0.00
914 3 0.00
915 9 0.00
916 12 0.00
917 1 0.00
918 14 0.00
919 5 0.00
920 8 0.00
921 7 0.00
922 8 0.00
923 13 0.00
924 17 0.00
925 22 0.00
926 8 0.00
927 11 0.00
928 6 0.00
929 3 0.00
930 19 0.00
931 12 0.00
932 9 0.00
933 9 0.00
934 9 0.00
935 17 0.00
936 10 0.00
937 6 0.00
938 6 0.00
940 4 0.00
942 6 0.00
943 8 0.00
944 12 0.00
946 10 0.00
947 4 0.00
948 4 0.00
949 12 0.00
950 8 0.00
951 10 0.00
952 2 0.00
953 5 0.00
954 3 0.00
955 1 0.00
956 2 0.00
957 5 0.00
958 8 0.00
959 9 0.00
960 7 0.00
961 7 0.00
962 13 0.00
963 27 0.00
964 4 0.00
965 8 0.00
966 10 0.00
967 16 0.00
968 26 0.00
969 9 0.00
970 13 0.00
971 3 0.00
972 16 0.00
973 4 0.00
974 10 0.00
975 102 0.01
976 15 0.00
977 36 0.00
978 12 0.00
979 4 0.00
980 10 0.00
981 4 0.00
982 12 0.00
983 13 0.00
984 7 0.00
985 3 0.00
987 12 0.00
988 4 0.00
989 9 0.00
990 19 0.00
991 180 0.01
992 94 0.01
993 13 0.00
994 13 0.00
995 9 0.00
996 17 0.00
997 7 0.00
998 9 0.00
999 14 0.00
1000 13 0.00
1001 40 0.00
1002 15 0.00
1003 10 0.00
1004 4 0.00
1005 6 0.00
1006 7 0.00
1007 4 0.00
1008 5 0.00
1009 7 0.00
1010 6 0.00
1011 5 0.00
1012 1 0.00
1013 1 0.00
1014 2 0.00
1015 1 0.00
1016 3 0.00
1017 5 0.00
1018 3 0.00
1019 5 0.00
1020 7 0.00
1021 4 0.00
1022 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (877 bp):
TCCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTA
CCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCT
AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAA
ATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
GCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCAGGT
TCTCCGAGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGC
CCAGCATGTGCTGCCGCAACCCTCGGTCCTGG
Found at i:14050442 original size:26 final size:26
Alignment explanation
Indices: 14050413--14050465 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14050403 TCGATCCGAT
*
14050413 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
14050439 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
14050465 C
1 C
14050466 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:14051344 original size:26 final size:26
Alignment explanation
Indices: 14051306--14051358 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14051296 CTGATCCGAT
*
14051306 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
*
14051332 CTTAGACTAGGAATGAACTCCCTATG
1 CTTAGACTAGGAATGAACTCCATATG
14051358 C
1 C
14051359 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14053123 original size:26 final size:26
Alignment explanation
Indices: 14053084--14053136 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
14053074 CTGGTCTGAT
* * *
14053084 CTTAGTCTGGGAATAAACTTCGTATG
1 CTTAGACTGAGAATAAACTCCGTATG
*
14053110 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATAAACTCCGTATG
14053136 C
1 C
14053137 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATAAACTCCGTATG
Found at i:14054015 original size:26 final size:26
Alignment explanation
Indices: 14053986--14054038 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14053976 CCGGTCTGAT
*
14053986 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14054012 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14054038 C
1 C
14054039 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14054911 original size:26 final size:26
Alignment explanation
Indices: 14054872--14054927 Score: 87
Period size: 26 Copynumber: 2.2 Consensus size: 26
14054862 GGTCCAGTCC
* *
14054872 TATG-TTAGATTGGGAATGAACTTCG
1 TATGCTTAGACTGGGAATGAACTCCG
14054897 TATGCTTAGACTGGGAATGAACTCCG
1 TATGCTTAGACTGGGAATGAACTCCG
14054923 TATGC
1 TATGC
14054928 CTAAATCAAC
Statistics
Matches: 28, Mismatches: 2, Indels: 1
0.90 0.06 0.03
Matches are distributed among these distances:
25 4 0.14
26 24 0.86
ACGTcount: A:0.27, C:0.14, G:0.27, T:0.32
Consensus pattern (26 bp):
TATGCTTAGACTGGGAATGAACTCCG
Found at i:14056022 original size:12 final size:12
Alignment explanation
Indices: 14056005--14056029 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
14055995 ACCGACGAAA
14056005 CGAGCGGGCGGG
1 CGAGCGGGCGGG
14056017 CGAGCGGGCGGG
1 CGAGCGGGCGGG
14056029 C
1 C
14056030 ACTACGTCGG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.08, C:0.28, G:0.64, T:0.00
Consensus pattern (12 bp):
CGAGCGGGCGGG
Found at i:14056709 original size:26 final size:26
Alignment explanation
Indices: 14056680--14056732 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
14056670 CCGATCCGAT
*
14056680 CTTAGACT-GAGAATGAACTCCGTATG
1 CTTAGACTAG-GAATGAACACCGTATG
*
14056706 CTTAGACTAGGAATGAACACTGTATG
1 CTTAGACTAGGAATGAACACCGTATG
14056732 C
1 C
14056733 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.32, C:0.19, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACACCGTATG
Found at i:14058524 original size:719 final size:712
Alignment explanation
Indices: 14056831--14058876 Score: 2750
Period size: 719 Copynumber: 2.9 Consensus size: 712
14056821 ATCCGATCCA
* *
14056831 ATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAATAGGCGGGCGAGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG-AACG---A-GCGGGCGAGCG
*** * *
14056896 GGCGAAAACTACACCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGG
61 GGCGGGCACTAC-GCGGCCAGAGAGACAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * ** *
14056961 GTCTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAAT
125 GTTTAGGCACATGTTCAAATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
14057026 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATATTTCACGATTTT
190 GGT-CCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTT
* * * * * **
14057091 TGAAACTTTTTATGATTCGAGATTTTTTAAAATTTTTACGAAATTAGTTTTGGCCCCAAACTTGG
254 CGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
*
14057156 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
319 TAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
* * *
14057221 AAGATTTTCTAACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAA
384 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
14057286 ACCTGTATAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
449 ACCTGTATAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
14057351 GCCAATAAAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCTCGGCCACCC
514 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCACCC
* * * *
14057416 CGATCGCCGGAACCCCAACTCCGTCGGTCAAGTTCTCGGGCAATGCTCTGACGATGGTGCCCCGA
579 CGATCGCCGGAACCCCAACGCCGCCGGTCAAGTTCTCGGGCAATGCTCCGACGATGGTGCCCCAA
* **
14057481 CGAAGAAAAATGCAACACCAGCACATGCCCGAGCCAAGCATGTGCTGCTGCCACCCTCAATCTGG
644 CGAAGAAAAATACAACACCAGCACATGCCCGAGCCAAGCATGTGCTGCCACCACCCTCAATCTGG
14057546 TCCG
709 TCCG
*
14057550 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGACAACCGATGAA--A-----CGAGCGGGCGG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAACGAGCGGGCGAGCGGGCGG
* * * *
14057608 GCACTATGCAGCCAGAGAGACAGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAG
66 GCACTACGCGGCCAGAGAGACAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
14057673 GCAGATGTTCAAATTTCTGTGTGCCAATGCCTTTTTTATGGCTTGTAAATTCGTACAATGGTCTC
131 GCACATGTTCAAATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC-C
* *
14057738 GTAAGCCTTCACGTGAAGTTTAATGGCAAGATGACTTGTTTTCTATTTTTCATGATTTTCGAAAC
195 TTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTCGAAAC
* * * * * * *
14057803 TTTTTACGGTTTGGGACTTTTTAAAGTTTTTTTGGAAGGAGTTTTAGCCCCAAACTTGGTAGATG
260 TTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * * *
14057868 TGATCCTTGTATTTTTTTTTGCATGCAAAAAAAAATTCAGCTAAAAACTCTAAGTGTACAAGATT
325 TGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATT
*
14057933 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGC-AACCTGT
390 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * *
14057997 ATAATCTCAAATGCCTCTTTAAAGGGGTCGTGAGCTCTCAAGGGTTTGATGAGGGATAGGGGG-C
455 ATAATCTCAAATG-CTCTTTAAGGGGGT-GTGAGTTCTCGA-GGTTTGATGAGGGATAGGGGGCC
* * *
14058061 AAT-TAAGGG-CAAGTACCAGCGCCCATCGTACATCATGTGGGCCACACGCCCCT-GGCC-CGCC
517 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG-CACAC-CCCCTCGGCCAC-CC
* * *
14058122 CGAT-GCCGGATA-CCCACCGCCGCCGGTC-AGTTCTC-GGCGATGCTCCCG-GGATGGTGCCCG
579 CGATCGCCGGA-ACCCCAACGCCGCCGGTCAAGTTCTCGGGCAATGCT-CCGACGATGGTGCCC-
* * *
14058182 CAAC-AAGAAAAAATACGAGCGCCAGCACAATCGCCCGAAG-CAAGCATGTGGCTGCCACATACC
641 CAACGAAG-AAAAATAC-AACACCAGCAC-AT-GCCCG-AGCCAAGCATGT-GCTGCCAC-CACC
*
14058245 CTCGATCTGGTCCG
699 CTCAATCTGGTCCG
* * *
14058259 ATTCTTAGACTGGGAATGAACTCCGTATGCGTAACCCAACCGATGAAGCGAGCGGGCGGGCGGGC
1 A-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAA-CGAGCGGGCGAGCGGGC
* * * * *
14058324 GGGCACTACGTCGGCTAGAAAGGCAGGATGCACAAGCTGTTGATCGATAGGGTGGTAGGTGGGTT
64 GGGCACTACG-CGGCCAGAGAGACAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
14058389 TAGGCACATGTTCAAATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
128 TAGGCACATGTTCAAATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
** *
14058454 GCCTTGGGCCTTCACGTGAAGTTTAATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTCAA
193 -CCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTCGA
* *
14058519 AACTTTTTTCGGTTCGTGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAGA-TTGGTA
257 AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA-ACTTGGTA
* * * *
14058583 GACGTTATCCCTGTATTGTTATTGGCATGCTCAAAAAAATTCAGCTAAAAACTCAAAGTGTACAA
321 GACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAA
* * * *
14058648 GA-TTTGTGACCATTCGAAAAAAGTGTCCCCATTTTAGACAGTTTAATGGCTACTGGTAGCAAAC
386 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
14058712 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
451 CTGTATAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * *
14058777 CAATATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCGCACACCCCCCCAGCCCCCCCG
516 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCACCCCG
* * * * * *
14058842 ATCGACGAAACCCTAATGCCACCGGTCAGGTTCTC
581 ATCGCCGGAACCCCAACGCCGCCGGTCAAGTTCTC
14058877 CGGCGATTGT
Statistics
Matches: 1160, Mismatches: 129, Indels: 75
0.85 0.09 0.05
Matches are distributed among these distances:
703 21 0.02
704 19 0.02
705 78 0.07
706 368 0.32
707 47 0.04
708 29 0.03
709 17 0.01
710 42 0.04
713 2 0.00
716 21 0.02
717 18 0.02
718 106 0.09
719 384 0.33
720 8 0.01
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (712 bp):
ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAACGAGCGGGCGAGCGGGCGG
GCACTACGCGGCCAGAGAGACAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATGTTCAAATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCT
TAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTCGAAACT
TTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
GATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTT
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
TAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCACCCCGATCGC
CGGAACCCCAACGCCGCCGGTCAAGTTCTCGGGCAATGCTCCGACGATGGTGCCCCAACGAAGAA
AAATACAACACCAGCACATGCCCGAGCCAAGCATGTGCTGCCACCACCCTCAATCTGGTCCG
Found at i:14058995 original size:25 final size:25
Alignment explanation
Indices: 14058967--14059018 Score: 86
Period size: 25 Copynumber: 2.1 Consensus size: 25
14058957 GATCTGATCT
*
14058967 TAGACTGGAATGAACTCCGTATGCC
1 TAGACTGGAATGAACTCCGTACGCC
*
14058992 TAGACTGGAATGAACTTCGTACGCC
1 TAGACTGGAATGAACTCCGTACGCC
14059017 TA
1 TA
14059019 AGTTGACCCA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
25 25 1.00
ACGTcount: A:0.29, C:0.23, G:0.23, T:0.25
Consensus pattern (25 bp):
TAGACTGGAATGAACTCCGTACGCC
Found at i:14059241 original size:25 final size:25
Alignment explanation
Indices: 14059213--14059264 Score: 86
Period size: 25 Copynumber: 2.1 Consensus size: 25
14059203 GATCTGATCT
*
14059213 TAGACTGGAATGAACTCCGTATGCC
1 TAGACTGGAATGAACTCCGTACGCC
*
14059238 TAGACTGGAATGAACTTCGTACGCC
1 TAGACTGGAATGAACTCCGTACGCC
14059263 TA
1 TA
14059265 AGTTGACCCA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
25 25 1.00
ACGTcount: A:0.29, C:0.23, G:0.23, T:0.25
Consensus pattern (25 bp):
TAGACTGGAATGAACTCCGTACGCC
Found at i:14059379 original size:246 final size:246
Alignment explanation
Indices: 14058945--14059418 Score: 905
Period size: 246 Copynumber: 1.9 Consensus size: 246
14058935 GTGCTGCCGT
14058945 AACCCTCGGTCCGATCTGATCTTAGACTGGAATGAACTCCGTATGCCTAGACTGGAATGAACTTC
1 AACCCTCGGTCCGATCTGATCTTAGACTGGAATGAACTCCGTATGCCTAGACTGGAATGAACTTC
14059010 GTACGCCTAAGTTGACCCACAAAATGAGCGTGCAGGCGCTCAGTTGGCCAGAGGGGCGGGATGCG
66 GTACGCCTAAGTTGACCCACAAAATGAGCGTGCAGGCGCTCAGTTGGCCAGAGGGGCGGGATGCG
14059075 CAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCTGTCGATCTTGCTACCGCAACCCTCAGTCC
131 CAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCTGTCGATCTTGCTACCGCAACCCTCAGTCC
* *
14059140 TG-TCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCAACGA
196 -GATCCGATCTTAGACTGGGAATCAACTCCGTATACCTAAGCCAACCAACGA
14059191 AACCCTCGGTCCGATCTGATCTTAGACTGGAATGAACTCCGTATGCCTAGACTGGAATGAACTTC
1 AACCCTCGGTCCGATCTGATCTTAGACTGGAATGAACTCCGTATGCCTAGACTGGAATGAACTTC
14059256 GTACGCCTAAGTTGACCCACAAAATGAGCGTGCAGGCGCTCAGTTGGCCAGAGGGGCGGGATGCG
66 GTACGCCTAAGTTGACCCACAAAATGAGCGTGCAGGCGCTCAGTTGGCCAGAGGGGCGGGATGCG
*
14059321 CAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGTTGTCGATCTTGCTACCGCAACCCTCAGTCC
131 CAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCTGTCGATCTTGCTACCGCAACCCTCAGTCC
14059386 GATCCGATCTTAGACTGGGAATCAACTCCGTAT
196 GATCCGATCTTAGACTGGGAATCAACTCCGTAT
14059419 GCTTAGACTG
Statistics
Matches: 224, Mismatches: 3, Indels: 2
0.98 0.01 0.01
Matches are distributed among these distances:
245 1 0.00
246 223 1.00
ACGTcount: A:0.23, C:0.29, G:0.26, T:0.22
Consensus pattern (246 bp):
AACCCTCGGTCCGATCTGATCTTAGACTGGAATGAACTCCGTATGCCTAGACTGGAATGAACTTC
GTACGCCTAAGTTGACCCACAAAATGAGCGTGCAGGCGCTCAGTTGGCCAGAGGGGCGGGATGCG
CAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCTGTCGATCTTGCTACCGCAACCCTCAGTCC
GATCCGATCTTAGACTGGGAATCAACTCCGTATACCTAAGCCAACCAACGA
Found at i:14059423 original size:26 final size:26
Alignment explanation
Indices: 14059394--14059446 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14059384 CCGATCCGAT
14059394 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
14059420 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
14059446 C
1 C
14059447 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:14061206 original size:26 final size:26
Alignment explanation
Indices: 14061177--14061229 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14061167 CCTGTCCGAT
* *
14061177 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATAAACTCCATATG
*
14061203 CTTAGACTGGGAATAAACTCCATATG
1 CTTAGACTAGGAATAAACTCCATATG
14061229 C
1 C
14061230 CTATGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.21, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATAAACTCCATATG
Found at i:14062129 original size:26 final size:26
Alignment explanation
Indices: 14062078--14062130 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14062068 TCAGTCTTAT
*
14062078 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14062104 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14062130 C
1 C
14062131 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14063011 original size:26 final size:26
Alignment explanation
Indices: 14062974--14063033 Score: 97
Period size: 26 Copynumber: 2.4 Consensus size: 26
14062964 CCTTGGTCTG
14062974 CTCCG-AT-CTTAGACTGCGAATGAA
1 CTCCGTATGCTTAGACTGCGAATGAA
*
14062998 CTCCGTATGCTTAGACTGGGAATGAA
1 CTCCGTATGCTTAGACTGCGAATGAA
14063024 CTCCGTATGC
1 CTCCGTATGC
14063034 CTAAGTCAAC
Statistics
Matches: 33, Mismatches: 1, Indels: 2
0.92 0.03 0.06
Matches are distributed among these distances:
24 5 0.15
25 2 0.06
26 26 0.79
ACGTcount: A:0.25, C:0.25, G:0.23, T:0.27
Consensus pattern (26 bp):
CTCCGTATGCTTAGACTGCGAATGAA
Found at i:14063916 original size:26 final size:26
Alignment explanation
Indices: 14063887--14063937 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14063877 GATTCGATCC
*
14063887 TAGACTATGAATGAACTCCGTATGCT
1 TAGACTAGGAATGAACTCCGTATGCT
*
14063913 TAGACTAGGAATGAACTTCGTATGC
1 TAGACTAGGAATGAACTCCGTATGC
14063938 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.18, G:0.22, T:0.29
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCGTATGCT
Found at i:14064034 original size:904 final size:903
Alignment explanation
Indices: 14059365--14065059 Score: 7053
Period size: 903 Copynumber: 6.4 Consensus size: 903
14059355 TTGTCGATCT
* * *
14059365 TGCTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATCAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGG
*
14059430 GAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGA--
* * *
14059495 GGTGGGATGCGTGTGATGCGCAAGCTGGGGATCGATCGAGTCCCCCTCTGTGTGCTGCCGAT-CT
129 ---GGG--GCG-G-GATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCT
* * * * *
14059559 GCTGCCACAA-CCTGCGGTCCT-GTCTAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCAA
187 GCTGCCGCAACCCT-CAGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
14059622 ACCGACGAAACGAGC-GAGCAGGCGGCCGGCCGGGCACT-CTGTCGGCCAGAAAGACGGGATGCA
250 ACCGACGAAACGAGCGGA-CGGGCGGACGGGCGGGCACTAC-GTCGGCCAGAGAGACGGGATGCG
* * * * * * * *
14059685 CAAGCTGTGGATCAATACGGTGGTAGGTGGCTTGATGCACATCTTCGTATTTCTGTGTGCCAATG
313 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
14059750 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
378 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * ** * * *
14059815 GACAACTTGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAACTTT
443 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * ** * *
14059880 TTTCGAAAGGAGTTCTAGCATCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
508 TTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACA
* * ** * ** *
14059945 AAAAAGTTCAACTAAAAACTCGCAGTATACAAGATTTTGTGACTGTTTGAAAAAAGTATCCCCAT
573 AAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14060010 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGTGGGTGT
638 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
14060075 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCCCA
703 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * ** * * *
14060140 CATCATGTGTGCACACCCTCCCGGCCCCCCCGATCGTCGGAACCCCAATACCGCCAGTCAGGTTC
768 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCACCGGAA-CCCAATGCCGTCGGTCAGGTTC
* * * ** * ** * *
14060205 TCCGACAATACTCCGACAATGGTGCCCCGACGAATAAAAATATGGCATCAGCACGTGCCCGAGCC
832 TCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
14060270 CAGCATG
897 CAGCATG
*
14060277 TGCTGTCGCAA-CC-C--T-C-A---G-TC-----C---G---G---TCCG-AT-CTTAGACTGG
1 TGCTGCCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
14060316 GAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGCGGTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGG
* * * * * ** * * * * *
14060381 GGCTGGATGCGCAAGCTGGGGATCAGCCGGGTCCCCTTCTACGTGTTACCGATCCTTCTACTGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCA
* * * ** *
14060446 ACCCTCAGTTTGGTCCGATCTTAGACTTGGAATGAACTAGGTATGCCTAAGCCAACCGACAAAAC
196 ACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
14060511 GAGC-GA------G-CGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
261 GAGCGGACGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
*
14060568 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
326 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
* * *
14060633 TTGTAAATTCATACAATGGTCCCTTAAGCCTTAACGTGAAGTTTCATGGCAAGATGACTCATTTT
391 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * *
14060698 CTATTTTTTACGATTTGTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGTGT
456 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGT
* *
14060763 TTTGGTCCCAAACTTTGG-AGACA-TGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAG
521 TTTGGCCCCAAAC-TTGGTAGA-AGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* * *
14060826 CTAAAAGCTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTTTCCCCATTTCAGACACTT
584 CTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14060891 TAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAG
649 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
14060956 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
714 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
*
14061021 CACACCCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAAGATG
779 CACA-CCCCCCCGGCCCCCCCGATCACCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATG
* * * *
14061086 CTCCGATGATGGTGCTCCGGTGAAGAATAATGTGGCACCAGCACATGCTCC-AGCCCAGCATG
842 CTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGC-CCGAGCCCAGCATG
14061148 TGCTGCCGCAACCCTCAGTCCTG-TCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTG
1 TGCTGCCGCAACCCTCAGTCC-GATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTG
* * * * * * *
14061212 GGAATAAACTCCATATGCCTATGTCAACCCACGAAACGAGCGTACGGGCGCTCAGTTGGCTAAAG
65 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAG
* * * * * **
14061277 AGGCGGGATGTGCAAGTCGGGGATCGG-CTGGGTCCCCCTCTGTATGCAGCCGATCCTGCTATCG
130 GGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCG
* * * * *
14061341 TAACCCTCAG-CTCGGTTTGATCTTAGACTGGCAAATGAACTCCGTATGCCTAAGCCAATCGATG
194 CAACCCTCAGTCT-GGTCTGATCTTAGACTGG-GAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
14061405 AAACGAGCGGGCGGGC-GAGCGGGCGTGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGTCAT
257 AAACGAGCGGACGGGCGGA-CGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
*
14061469 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTT
321 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTT
* *
14061534 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCATGTGAAGTTTCATGGCAAGACGACTC
386 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * *
14061599 GTTTTCTATTTTACATGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAA-TTTTTC-AAA
451 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAA
**** * **** *
14061662 ATTCTTTCTGGCCCCGAACTTGGTATTTCTGATCCCTGTATTTTTGTTGGCATGCACAAAAAAAT
516 GGAGTTT-TGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
14061727 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAACAAGTGTCCCCATTTAAGAC
580 TCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
14061792 ACTTTATTGGCTACTGGCAGCAAACCTATAAAATCACAAATGCTCTTTAA-GGGGTGTGAGTTCT
645 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
14061856 -GAGGTTTGATTG-GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
710 CGAGGTTTGA-TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
14061919 GTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAAACCCAATGCCGCCGGTCAGGTTCTTC-AG
774 GTGCGCACACCCCCCCGGCCCCCCCGATCACCGG-AACCCAATGCCGTCGGTCAGGTTCTCCGA-
* * * * *
14061982 TGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCAGAACCAGCACATGCCCCAGCCCAGCA
837 CGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
14062047 TG
902 TG
* * * ** * * *
14062049 TGCTACCGCAACCCTCGGTTC-AGTCTTATCTTAGACTGGGAATGAACTTCATATGCTTAGACTG
1 TGCTGCCGCAACCCTCAGTCCGA-TCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTG
* * * * *
14062113 GGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGCCGACAAGAG
65 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAG
** * * *
14062178 GGGCGGGATTAGCAAGCCGGGGAT-AGACTGGGTCCCCCTCTGTGTCCTGCCGATCCTGCTGCCG
130 GGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCG
* * * * * *
14062242 CAACCTTCGGTCTGGTCTGATCTTAGACTGGGAATGAGCTCCGTATGCATAAGCTAACCGATGAA
194 CAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* *
14062307 ACGAGCAGG-CGGGCGGGCGGGCGGACACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
259 ACGAGC-GGACGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* ** *
14062371 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTATGTGCAAATGCCATTTTTAT
323 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
*
14062436 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGT
388 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * * *
14062501 TCTCTATTTTTCAGGA-TTTTGCAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAG
453 TTTCTATTTTTCACGATTTTTG-AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAG
* * * * *
14062565 GAG-TTTGGACCCCAAATTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAAAT
517 GAGTTTTGG-CCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* *
14062629 CAGCCAAAAACTCAAAGTGTACAAGATTTTGTG-CCAATTGAAAAAAGTGTCCCCATTTCAGACA
581 CAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
14062693 CTTTAATGGCTACTGGCAGTAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGCTATGA-TGTCT
646 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT-TCT
* * *
14062757 CGAGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTACCAGCAGCCAACGCACATCATG
710 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* *
14062822 TGCGCACACCCCCCCGGCCCCCCCCGATCACCGGAATTCCAATG-CGTCGGTCAGGTTCTCCGGC
775 TGCGCACACCCCCCCGG-CCCCCCCGATCACCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGAC
* * * * **
14062886 GATGCTCCCACGATGGTGCCCCGGAGAAGAAAAATGCGACACCAGCACAAGCCATAGCCCAGCAT
838 GATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
14062951 G
903 G
* * ** * *
14062952 TACTGCCGTAACCCTTGGTCTGCTCCGATCTTAGACT-GCGAATGAACTCCGTATGCTTAGACTG
1 TGCTGCCGCAACCCTCAGTCCGATCCGATCTTAGACTAG-GAATGAACTCCGTATGCTTAGACTG
* ** * * * *
14063016 GGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAAAGTGCAGTCACTCAGTCGACCAGAG
65 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAG
* * *
14063081 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCACCTCTGCGTGCTGCCGATCCTGCTGCCAC
130 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGC
* ** * * *
14063146 AACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAACAAACTGACGAAA
195 AACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * * * *
14063211 CGAGCGGACGGGCAGATGGGTGGGCACTACGCCGACCAGAGAGTCAGGATGCGCAAGCCGTGGAT
260 CGAGCGGACGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * *
14063276 CGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGG
325 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
* *
14063341 CTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTT
390 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * **
14063406 TCTATTTTCCATGATTTTTGGAA-TGTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGA
455 TCTATTTTTCACGATTTTTGAAACT-TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGA
* * *
14063470 GTTTTGGCCCCAAACTTGGTAGAAGTGATCTTTGTATTTTTTTTGGCATGCACAAAGAAAA-TCG
519 GTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAA-AAAATTCA
*
14063534 GCTAAAAACACAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
583 GCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
14063599 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGA
648 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
14063664 GGTTTGATAAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
713 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * **
14063729 GCACACCCCCCCGACCCCCCCGATCATCGGAACCCAAATGACGTCGATCAGGTTCTCCGTTGATG
778 GCACACCCCCCCGGCCCCCCCGATCACCGGAACCC-AATGCCGTCGGTCAGGTTCTCCGACGATG
* * * * **
14063794 CTCCGGCGATGGTGCCCCGGTAAAGAAAAATGCGGCACCCGCAGAAACCCGAGCCCAGCATG
842 CTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * * *
14063856 TTCTGCTGTAACCCTCAGTCCGATTCGATCCTAGACTATGAATGAACTCCGTATGCTTAGACTAG
1 TGCTGCCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGG
* * *
14063921 GAATGAACTTCGTATGCCTAAGTCAACACACGAAATGAGCGTGCGGGCGCTCAGTCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGG
* *
14063986 GGCGGGATGCACAAGCCGGGGATCGGTCAGGTCCCCCTCTGTGTGCTGCCGATCCTGCT-CTCGC
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGC-CGC
* * * * * * *
14064050 AACCTTCAATTTGGTTTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAATCGATGAAA
195 AACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
14064115 CGAACGGGCGGGCTGGA-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCTGTGGA
260 CGAGCGGACGGGC-GGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
14064179 TCGATAGGGTGGTAGGAGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGGCATTTTTATG
324 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
** *
14064244 GCTTGTAAATTCATACAATGGTCCCTTAAGGGTTCACGTGAAGTTTCATGGCAAGACGACTCCTT
389 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
14064309 TTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTGCGGAAGGA
454 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGA
*
14064374 GTTTTGGCCCCAAACTTGGTAGACA-TGATCCTTGTATTTTTGTTGGCATGTACAAAAAAATTCA
519 GTTTTGGCCCCAAACTTGGTAGA-AGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
14064438 GCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACT
583 GCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
14064502 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGCGAGTTCTTGA
648 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
*
14064567 GGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
713 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
14064632 TCACACCCCCCTGGCCCCCCCGATCACTGGAACCCTAATGCCGTCGGTCAGGTTCTTCGACGATG
778 GCACACCCCCCCGGCCCCCCCGATCACCGGAACCC-AATGCCGTCGGTCAGGTTCTCCGACGATG
* * * * * * *
14064697 CTCCGACGATGGTGCCCCAGTGAAGAAATATACGGTACTAGCACGTGCCTGAGCCCAGCATG
842 CTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* *
14064759 TGCTGTCGCAACCCTC-GATTCGATCCGA---T---C-----AT--A----G-A--C-TA-A---
1 TGCTGCCGCAACCCTCAG-TCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTG
* * * *
14064798 -GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGTGCTCAGTCGGCCAAAA
65 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAG
* * ** * * * * * *
14064862 GGGCGGGATGCGCAAGTCGGGGATCGGTCGGGTCCCTCTCTGCATGTTGGCAATCTTGCTACCAC
130 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGC
* ** * * *
14064927 GACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAA
195 AACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*
14064992 CGA---G-C--G-GGA-GGGTGGGCACTAC-TCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
260 CGAGCGGACGGGCGGACGGGCGGGCACTACGTC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGA
*
14065048 TCGATATGGTGG
324 TCGATAGGGTGG
14065060 CCAGACTCGT
Statistics
Matches: 4167, Mismatches: 524, Indels: 227
0.85 0.11 0.05
Matches are distributed among these distances:
868 1 0.00
869 56 0.01
870 450 0.11
871 116 0.03
872 4 0.00
873 2 0.00
874 1 0.00
875 1 0.00
876 1 0.00
877 208 0.05
878 64 0.02
879 5 0.00
880 1 0.00
881 6 0.00
882 2 0.00
883 1 0.00
885 1 0.00
886 69 0.02
887 2 0.00
888 4 0.00
889 1 0.00
890 1 0.00
892 3 0.00
894 1 0.00
895 4 0.00
896 4 0.00
897 134 0.03
898 34 0.01
899 6 0.00
900 329 0.08
901 384 0.09
902 80 0.02
903 965 0.23
904 836 0.20
905 161 0.04
906 215 0.05
907 1 0.00
908 1 0.00
910 1 0.00
911 2 0.00
912 9 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (903 bp):
TGCTGCCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGG
GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGG
GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCA
ACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
GAGCGGACGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGT
TTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
CACCCCCCCGGCCCCCCCGATCACCGGAACCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCC
GACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
Found at i:14065580 original size:26 final size:26
Alignment explanation
Indices: 14065548--14065600 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14065538 CTGATATGAT
14065548 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14065574 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14065600 C
1 C
14065601 CTAAGTCAGC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14067213 original size:25 final size:26
Alignment explanation
Indices: 14067170--14067221 Score: 97
Period size: 25 Copynumber: 2.0 Consensus size: 26
14067160 CCGGTCCGAT
14067170 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14067196 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14067221 C
1 C
14067222 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 18 0.69
26 8 0.31
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14068099 original size:26 final size:26
Alignment explanation
Indices: 14068063--14068115 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14068053 CCAGTCTGAT
14068063 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14068089 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14068115 C
1 C
14068116 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14068699 original size:903 final size:899
Alignment explanation
Indices: 14066458--14073684 Score: 8506
Period size: 893 Copynumber: 8.2 Consensus size: 899
14066448 GGTCTGGTCC
* *
14066458 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCAGGC----
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGG
* * *
14066519 GC--GCACTACGTCGACCAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTTGTAGGTGGA
66 GCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
14066582 TTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAGTTTTATGGCTTGTAAATTCATACAATT
131 TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
14066647 GTCCTTTAAGCCTTCAC-TAGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
196 GTCCCTTAAGCCTTCACGT-GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** ** *** * * *
14066711 TAAAACTTTTTTTGGTTCGGGATTTTTTAAAAAAATTTTAGAAGGAATTTTGCCCCCAAACTTGG
260 CGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
14066776 TAGACGTGATCCTTGTATTTTT-TTTGGCATGCACAAAAAACTTCAACTAAAAACTTGAAGTGTA
325 TAGACGTGATCCTTGTATTTTTGTTCGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
14066840 CAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGTAGCA
390 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
14066905 AACTTGTAAAATCTCAAATGCTCTTCAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
455 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
14066970 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTAAACCCCCCGGCCCCCT
520 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* *
14067035 GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGAC
585 GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGACGATGGTGCCCCGAC
* *
14067100 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACTGCAACCCTTGGTCCGGT
649 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCC-GT
* *
14067165 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-GGAATGAACTCCGTATGCCTAAGTC
713 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTC
*** * * * *
14067229 AACCTTTGAAACAAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGAGGGATGCGTAAGTCGGGGATC
778 AACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * * * *
14067294 GATCAGGTCCCCCTCTACGTGGTGCCGATCCTACTGCCGCACCCCTCGATCCGATCC
843 GGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCCGATCT
* *
14067351 AATCTTAGACTGGGAATGAACTCCT-TATGCCTAAGCCAACCGATGAAAC-A---AGCGGGC--G
1 GATCTTAGACTGGGAATGAACT-CTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGG
* * * *
14067409 GGCGGGCATTACGCCGGCCAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
65 GGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
14067474 GTTTAGTCACATCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
130 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
14067539 TGTCCTTTAAGCCTTCAC-TAGAAGTTTCGTGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
195 GGTCCCTTAAGCCTTCACGT-GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * * **
14067603 TAGAAACTTTTTATGGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
259 TCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
14067668 GTAGACGTGATCCTTGTATTTTTGTT-GGCATGCA-AAAAACAATTCAGCTAAAAACTCGAAGTG
324 GTAGACGTGATCCTTGTATTTTTGTTCGGCATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTG
*
14067731 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAG
388 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
14067796 CAAACCTATAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
453 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * *
14067861 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCGCATCATATGCGCACACCCCCTGGCCCC
518 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC
* *
14067926 CCGATCGTCGGAACCTCAATGTCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
583 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGACGATGGTGCCCCG
14067991 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCA
647 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCC-
14068056 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAG
711 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAG
* * * * * * *
14068121 TCAACCTATGAAACAAGCGTGCGGGTGCTCAGCCGGCCAGAGGTGCGGGATGCGTAAGCCGGGGA
776 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * *
14068186 TCGGTCGGGTCCCCCTCTACGTGGTGCCGATCCTACTACTGCAACCCTCGATCCGATCT
841 TCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCCGATCT
* *
14068245 GATCTTAGACTGGGAATGAACTCTTTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGACGGGT
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGC-GG-
* * * *
14068310 GGGCGGGCACTACGTCGACCAAAGAGACGGGAAGCGTAAGCCGTGGATCGATAGGGTGGTATGTG
64 GGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * * *
14068375 GGTTATAGGCACATTTTCATATATCTGTGTGTCAATGGCATTTTTATGGCTTGTAAATTCATACA
129 GGTT-TAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
14068440 TTGGTCCCTTAAGCCTTCACTTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATT
193 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
*
14068505 TTCGAAACTTTTTACGGTTCGGGATCTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
258 TTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
* ***
14068570 GGTAGACGTGATCCTTGTATTTTT-TTCGGCATGCCCAAAAAAATTCAGCTAAAAACAAAAAGTG
323 GGTAGACGTGATCCTTGTATTTTTGTTCGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
*
14068634 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAG
388 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * *
14068699 CAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAT
453 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* ** * *
14068764 GGGGCCAATATAAGGGCTAAGTACCAATACCCATCGCACAACTTGTGCGCACACCCCCCGACGGC
518 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC--CGG-
** * * * *
14068829 CCCCCCGATCACCGAAACCCCAATGCCGTCGATCAGG-TCTTCCGACGATGCTCTGGCGATGGTG
579 CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC-TCCGACGATGCTC-GACGATGGTG
* * * * *
14068893 CCCCGACGAAGAAAAATACGGCACCAGCACACGCTCGAGCCTAGCATGTGCTGCCGCAACCCT--
642 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCG
14068956 -T--G---G----T---CT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTTCGTATGCC
707 GTCCGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCC
* * * * * ** * * * *
14068998 TAAGTCATCCCACGGAACGAGCATGCCGACAATTAG-CTGGCTAGAGGGTCGGGATGCGCAAGTC
772 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTC-GGCCAGAGGGGCGGGATGCGCAAGCC
* * ** ** * *
14069062 GAGGATCGGTCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTATCGCAACCATCCATCCTG-TCT
836 GGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCC-GATCT
* * * *
14069126 GATCTTAGACTGGGAGTGAACT-TCGTATGCATAAGCCAACTGATGAAACAAGCGGGCGGGCAGG
1 GATCTTAGACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGC-GG
* * * * * * *
14069190 TGGGCAGGTACTATGCCGGCCAGAGAGACGGGATGCCCAAGCCGTAGATCGATAGGGTGGTAGGT
64 -GGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* *
14069255 GGGTTTAGGCACATCTTCATATTTCTCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
128 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
*
14069320 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATT
193 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* *** * *
14069385 TTTGAAACTTTTTGA-GGTTCAATATTTTGTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAATT
258 TTCGAAACTTTTT-ACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACT
* * * *
14069449 TGGCAGACGTGATCCTTTTATTTTTGTTC-ACATGCATAAAAAAATTCAGCTAAAAACTCGAAGT
322 TGGTAGACGTGATCCTTGTATTTTTGTTCGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* * *
14069513 GTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATTGCTACTGGTA
387 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * **
14069578 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGTTGAATGATA
452 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
14069643 GGGGGCCAATATAAGGGCCAAGTACCAGCATCCATCGCACATCATGTGCGCACACCCCCTGGCCC
517 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
* * *
14069708 CCCTGATCGTCAGAACCCCAATGCTGCCGGTCAAGTTCT-C--CGA------A-GATGGTGCCCC
582 CCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGACGATGGTG-CCC
* * *
14069763 CG-CGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCT---G----CCGC-GAC
645 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTC
* * *
14069819 CGTC-GA---T---CT--G---G---TCC-AAT-CTTGGATTGGGAATGAACTTCGTATGCCTAA
710 CGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAA
* * * ** * **
14069867 GTCAACCCACGAAACGAGCGTGCAGGCGATCAATCGGTTAGAGGGGCGGGATGCGCAAGTCATGG
775 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * * *
14069932 ATCGGTCGAGT--CCC-C--C-T-CTG-CG----TGCTGCCGTAACCATC-AGTCTGGTCC
840 ATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGA-TCCGATCT
* * * *
14069980 AATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACTGATGAAACAAGTGGGCGGGCGGGC
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGG-
* * * * *
14070045 GAGTGGGTACTACGTC-AGCCAGAGAGACGGGATGCCCAAGTCGTTGATCGATAGGGTGGTAGGT
65 G-GCGGGCACTACGTCGA-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * * *
14070109 GGGTTTAGGCACATCTTTATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACG
128 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
14070174 ACGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATT
193 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * * * * *
14070239 TTCAAAACTTTTTGCGATTCAGGATTTTTTAAAATTTTTTTGGAAGGATTTTTTGCCCCAAACTT
258 TTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
* * * *
14070304 GGTAGATGTGATCCTTGTATTTTTGTTC-ACATGCAAAAAAAAAATTCAGCTAAAAACACGAAGT
323 GGTAGACGTGATCCTTGTATTTTTGTTCGGCATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGT
*
14070368 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCA
387 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * *
14070433 GCAAACCAGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCAAGGTTTGATGAGGGATA
452 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * * * **
14070498 GGCGGCCAATTTAAGCGCCAAGTACTAGCACCCATCGCACATCCTGTGCGCACACACCCCCCGAA
517 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCCCCCGGC
*
14070563 CCCCCGATCGTCGGAACCCAAAT-------GTC--G---T-C--CGA---T----GATGGTGCCC
580 CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGACGATGGTGCCC
** * * *
14070606 CGGTGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCGGCATGTGCTGCCGCAACCCTCGGTC
645 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTC
* * *
14070671 CGGTCTGATCTTAGACTGGGAATGAACACCGTATGCTTAGACTGGGAATGAACTCCGTATGCCAA
710 C-GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTA
* * * *
14070736 ACTCAAGCCACGAAACAAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGGGATGCGCAAGCCGGG
774 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * * * * **
14070801 GATCGATCAGGTCACCCTCTATGTGCTACCGATCGTGCTGCCGTAACCCTCGATCTAATCT
839 GATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCCGATCT
* *
14070862 GATCTTAGACTGGGAATAAACT-TCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
1 GATCTTAGACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGG
* *
14070926 CTGGCAGGCACTACGTCGACCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGT
65 --GGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
** * *
14070991 GGGTTTAGGCACATCTTCATATTTCTATGTGCGAATGCCATTTTTATGGCTTGTAAATTCGTACA
128 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
14071056 ATGGTCCATTAAGCCTTTACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
193 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* *
14071121 CTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
258 TTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
* * *
14071186 GGTAGACATGATCCTTGTATTTTTGTT-GGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTC
323 GGTAGACGTGATCCTTGTATTTTTGTTCGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
* * * *
14071250 TACAAGATTTTGTGACCATTTGAAAAAGGTGTCCACATTTTAGACACTTTAATGGCTACTGGTAG
388 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * *
14071315 CAAAGCTATAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCGAGG-TTGATGAGGGATAG
453 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * *
14071379 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCCCCCGACCC
518 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCC
* *
14071444 CCTCGATCTTCGAAACCCCAAT---G-C---C--G-TCT-----G--G-T----GATGGTGCCCC
582 CC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGACGATGGTGCCCC
* * * **
14071487 GATGAAGAAAAAT-----A-C-G-----G---TA--CCAGCATGTGCTACCGTAACCCTCAATCC
646 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCC
*
14071535 GATCTGATCTTAGACAGGGAATGAACTCCGTATGC-----C------T-AA----G--T--C-AA
711 G-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAA
* * * * *
14071579 G-----CCACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGGCAGAATGCGCAATCCGAGG
775 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * * *
14071639 ATCGATCGGGTCCCCCTCTGCGTGCTGCGGATCCTGTTGCCGTAACCCTCGGTCCGATCT
840 ATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCCGATCT
* * * *
14071699 GATCTTAAACTGGGAATGAACTCCGTATTCCTAAGCCAACCGATGAAACGA----GCGGGC--GA
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGG
* * * * *
14071758 GCGGGCACTAAG-CCAGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATGGGGTGGTAAGTGG
66 GCGGGCACTACGTCGA-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* **
14071822 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTTGTACAAT
130 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * * * *
14071887 GGTCCCTTAAGCCTTCACATGAGGTTTAATGGCAAGATGACTCGTTTTCTATTTTTCTCAATTTT
195 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* ** * **
14071952 CAAAACTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGAACCAAACTTGG
260 CGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
14072017 TAGCCATGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTCAAAATGTA
325 TAGACGTGATCCTTGTATTTTTGTTCGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * * * * * *
14072081 CAAGATTTTCTGACCATTTGAAAAAAATGTCCCCATTTTAGACACTTTAACGACTACTAGTAGCA
390 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
14072146 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
455 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
14072211 GGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATCATGTGCGCACACCCCCCGACCCCCC
520 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCC
* * * *
14072276 CGATCATCGGAACCCTAATGCCGCCGGTTAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGA
584 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGACGATGGTGCCCCGA
* * * * * *
14072341 CGGAGAAAAATGCGGCACCAGCACATTCCTGAGTCCAGCATGTGCTACCGCAACCCTTGGTCTGG
648 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTC-CG
* * * *
14072406 TCCGATCTTAGACTGGGAATGAACTCTGTACGCTTAGACTGGGAATGAAC-TCTGCATGCCTAAG
712 TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTC-GTATGCCTAAG
* * * * * *
14072470 TCAACCCACGAAACGAGTGTGCGAGTGCTTAGTCGGCCAGAGGGGCAGGATGTGCAAGCCGGGGA
776 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * *
14072535 TCAGTCGGGTCCCCCTCTGCGTACTGCCGATCCTGCTGCCGCAACCCTCGATCCGGTCC
841 TCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCCGATCT
* * *
14072594 GATCTTAGACTGGGAATGAACTAC-GTATGCCTAAGCCAACTGACGAAACGAGCGGACGGGCGGG
1 GATCTTAGACTGGGAATGAACT-CTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGG
* * *
14072658 TAGGTGGGCACTACG-CCAGCCAGAGCGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
65 --GGCGGGCACTACGTCGA-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
** * *
14072722 TGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCACTTTTATGGCTTGTTAATTCATAC
127 TGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
*
14072787 AATGGTCCCTTAAGCCTTCACGTGAGGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
192 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * * * * * * *
14072852 TTTTGAAACTTTGTACGGTTCTGGATTTTTTAAAATATTTTCGAAAGGAGCTTTGGCCCCAAACA
257 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACT
* * * **
14072917 TGGTAGACGTGATCCTTGTATTTTTTTTC-ACATGCACAAAAAAAAAATCAATTAAAAACTCGAA
322 TGGTAGACGTGATCCTTGTATTTTTGTTCGGCATGCAC--AAAAAAATTCAGCTAAAAACTCGAA
** * * *
14072981 GTGTAGGAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACTGG
385 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* *
14073046 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTGAGGTTTGATGAGGGA
450 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* *
14073111 TAGAGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
515 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* ** * * * *
14073176 CCCTCCGATCGTCAGAACCCCAATGCCATCGGTCAGATTC-CCCAGTGATGCTCTGACGATCGTG
580 CCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA-CGATGCTC-GACGATGGTG
* * ** * *
14073240 CCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCACAACCCTTG
642 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCG
* * * * * *
14073305 GTCTAGTCAGATCTTAGA-TTGGAATGAACGCCATATGCTTAGACTGGGAATGAACTCCGTATGC
707 GTC-CGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGC
* * * * **
14073369 ATAAATCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCACGATGCGCAAGCC
771 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCC
* * * * * *
14073434 GGGGATCGGTCGGGTCACCCTCTACGTGCTACCGATCCTGCTGCCACAACCCTCGGTCTGGTCT
836 GGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCCGATCT
* * * *
14073498 GATCTTAGACTAGGAATGAACTCTGTATGCCCAAGCCAACCGACGAAACGA----GTGGGC--GG
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGG
* * * * *
14073557 GCGGGCACTACGCCGACCAAAGAGACAGGATGTGCAAGCCGTGGATTGATAGGGTGGTAGGTGGG
66 GCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
14073622 TTTAGGCACATCTTCATATTTCTGCATTCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
131 TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
14073685 GGGCCAAGTA
Statistics
Matches: 5503, Mismatches: 635, Indels: 389
0.84 0.10 0.06
Matches are distributed among these distances:
828 2 0.00
829 418 0.08
830 69 0.01
831 1 0.00
832 1 0.00
833 7 0.00
837 146 0.03
838 1 0.00
839 3 0.00
842 2 0.00
843 6 0.00
844 55 0.01
845 1 0.00
846 1 0.00
847 4 0.00
849 3 0.00
851 5 0.00
852 26 0.00
853 8 0.00
854 335 0.06
855 191 0.03
856 16 0.00
857 17 0.00
858 4 0.00
859 5 0.00
860 3 0.00
861 1 0.00
862 2 0.00
863 58 0.01
864 3 0.00
865 3 0.00
866 148 0.03
867 7 0.00
868 3 0.00
869 55 0.01
870 89 0.02
872 3 0.00
873 2 0.00
874 5 0.00
875 1 0.00
876 8 0.00
877 28 0.01
878 8 0.00
879 17 0.00
880 492 0.09
881 376 0.07
882 339 0.06
883 7 0.00
885 1 0.00
886 1 0.00
887 1 0.00
889 7 0.00
890 3 0.00
891 4 0.00
892 6 0.00
893 678 0.12
894 183 0.03
895 147 0.03
896 114 0.02
897 2 0.00
898 7 0.00
899 5 0.00
900 4 0.00
901 2 0.00
902 63 0.01
903 650 0.12
904 213 0.04
905 313 0.06
906 5 0.00
907 109 0.02
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGG
GCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
AGACGTGATCCTTGTATTTTTGTTCGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCG
ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGACGATGGTGCCCCGACGA
AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGTCTG
ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAAC
CCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGT
CGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCCGATCT
Found at i:14070716 original size:26 final size:26
Alignment explanation
Indices: 14070680--14070732 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14070670 CCGGTCTGAT
14070680 CTTAGACTGGGAATGAACACCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
*
14070706 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
14070732 C
1 C
14070733 CAAACTCAAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACCGTATG
Found at i:14073356 original size:26 final size:25
Alignment explanation
Indices: 14073317--14073368 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 25
14073307 CTAGTCAGAT
*
14073317 CTTAGATTGGAATGAACGCCATATG
1 CTTAGATGGGAATGAACGCCATATG
* *
14073342 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGA-TGGGAATGAACGCCATATG
14073368 C
1 C
14073369 ATAAATCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 1
0.85 0.11 0.04
Matches are distributed among these distances:
25 6 0.26
26 17 0.74
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (25 bp):
CTTAGATGGGAATGAACGCCATATG
Found at i:14074697 original size:26 final size:26
Alignment explanation
Indices: 14074668--14074720 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14074658 CTGGTCCGAT
*
14074668 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14074694 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14074720 C
1 C
14074721 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14075600 original size:26 final size:26
Alignment explanation
Indices: 14075571--14075623 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14075561 TCGATCCGAT
14075571 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14075597 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14075623 C
1 C
14075624 CAAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14075932 original size:902 final size:900
Alignment explanation
Indices: 14074006--14077382 Score: 4794
Period size: 881 Copynumber: 3.8 Consensus size: 900
14073996 TCGTGACCCT
* * * *
14074006 CGGGCGGGCAGGTGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGTCGTGGATCGATAGGC
1 CGGGCAGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGG
** *
14074071 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAA
66 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGACATTTTTATGGCTTGTAAA
* * *
14074136 TTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAACACGACTCGTTTTCTATTTT
131 TTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * * *
14074201 TCATGTTTTTTAAAACTTTTTACGGTTCAAGATTTTTTAAATTTTTTTGGAA-GGATTTTTGACC
196 TCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAATGGAGTTTTGGCC
*
14074265 CCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
261 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * * * *
14074330 CGAAGTGTACAAGATTTTGTAACCATTTGAAAAAGGTGTGCCCATTTCAGACATTTTAATGGCTA
326 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* *
14074395 CTGGCAGCAAACTTGTAAAATCTCAAATGCTGTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
391 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* *** *
14074460 GGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATTGGACATCATGTGTGCACACCCCC
456 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCC
* * **
14074525 CC-GCCCCCCCGATCG-CAGAACCCCAATGCCGTCGGTCAGGTTCTCCATGATGCTCCGGTGATG
521 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGTGATGCTCCGACGATG
* ** * *
14074588 GTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGTATGTGCTGCCGCAACCC
586 GTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * *
14074653 TCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTA
651 TCGGTC-GATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * * *
14074718 TGCCTAAGTCAACCCCATGAGACGATCGTGCGGGTGCTCAGCTGGCCAGAGGGGCAGGATGCATA
715 TGCCTAAGTCAA-CCCATGAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGGCGGGATGCACA
* *
14074783 AGCCGGGGATC-GACCGGGTCCCCCTCTGCGTGCTACTGATCCTACCATG--GCAACCCTCAGTC
779 AGCCGGGGATCAG-TCGGGTCCCCCTCTGCGTGCTACTGATCCT-GC-TGCCGCAACCCTCAGTC
*
14074845 CGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAACGG
841 CGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-ACGG
** * * *
14074906 ATTGGCAAGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGTGCAAGCCGTGGATCGATAGG
1 -CGGGCAGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGG
14074971 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT-ATCATTTTTATGGCTTGTA
65 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGA-CATTTTTATGGCTTGTA
* *
14075035 AATTCATACAATAATCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
129 AATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** *
14075100 TTTCAAGATTTTGGAAAC-TTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGAATGGAGTTTTGG
194 TTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAATGGAGTTTTGG
* * *
14075164 CCCC-AA-TTGATAGACGTGATCCTTGTATTTTTCTTGGCATGCACAAACAAATTCAGCTAAAAA
259 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
14075227 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTTAGACACTTTAATGGC
324 CTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
14075292 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
389 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* *
14075357 GAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCACATATCATGTGCGCACACCC
454 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCC
*
14075422 ACCCCGGCCCCCCCGATCGTTGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGAC
519 -CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC-GTGATGCTCCGAC
* *
14075487 GATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCA
582 GATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * *
14075552 ACCTTCAGTTCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTC
647 ACCCTC-GGTCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * **
14075617 CGTATGCCAAAGTCAACCCATGAAACGAGCGTGCGGGGGCTCAGCTGGGGAAAGGGGCGGGATGC
711 CGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGGCGGGATGC
* * * *
14075682 ACAAGCCGGGAATCAGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCAGTC
776 ACAAGCCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTACTGATCCTGCTGCCGCAACCCTCAGTC
* * * *
14075747 CGATCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAATCGACAAAACGAGCGGG
841 CGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-C-GG
* * * * *
14075809 CGGGCAGGCAGGCGGGCACTACGCCTGCTAGAGAGACGGGATGCGCAAGCCATGTATCGATAGGG
1 CGGGCAGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGG
* * * * *
14075874 TGGTGGGTGGGTTTAGGCACATCTTCTTATTTC-GACGTTCCAATGATATTTTTATGGCTTGTAA
66 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-CATGCCAATGACATTTTTATGGCTTGTAA
* * *
14075938 ATTCATACAATGGTCCCTTAACCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
130 ATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* *
14076003 TTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC-AGATGGATTTTTGG
195 TTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGA-ATGGAGTTTTGG
**
14076067 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTATGAA
259 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
14076132 CTCAAAGTGTACAATATTTTGTGACCATTTGAAAAGAGTGTCCCCATTTCAGACACTTTAATGGC
324 CTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
14076197 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTCAAGGTTTGAT
389 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * * *
14076262 GAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAGCATCCATCGCACATCATGTGAGCACACAC
454 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACAC-C
* * * **
14076327 CCCCCGGCACCCCTGATCGCCGGAACCCCAATATCGTCGGTCAGGTTCTCC-----G----G-CG
518 CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGTGATGCTCCGACG
* * * * *
14076382 ATGGTGCCCCGACGAAGAAAAATACGGCACCAGAACATGCTCGAGCCCAGCACGTGCTG-CGTAA
583 ATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
*
14076446 CCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCC
648 CCCTCGGT-CGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
* * * * * *
14076511 GTATGCCTAAGTTAACCTACGAAACGAGTGTGCGGGCTCTCAGCTGGCCAAAGGGGCGGGATGCG
712 GTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGGCGGGATGCA
* * * * *
14076576 CAAGCCGGGGATCAGTTGAGTCCCCCTCTACATGCTACTGATCCTGCTGCCGCAACCCTCAATCC
777 CAAGCCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTACTGATCCTGCTGCCGCAACCCTCAGTCC
* *
14076641 GGT-TCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGA---
842 GATCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGG
*
14076697 ---GCAGGCA----GGCAGTACGCCGGCCAGAGAGAC-GGAATGCGCAAGCCGTGGATCGATAGG
1 CGGGCAGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGG-ATGCGCAAGCCGTGGATCGATAGG
* *
14076754 GTGGTAGGTGGGTTTAGGCACATCTACATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
65 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGACATTTTTATGGCTTGTAA
* *
14076819 ATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAATATGACTCGTTTTCTATTT
130 ATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * * * * *
14076884 TTCATGATTTTCAAAACTTTTCACGGTTCGGGATTTTGTAAAATTTTTTTGAAAGCAGTTTTGGC
195 TTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAATGGAGTTTTGGC
* * *
14076949 CCCAAACTGGGTCGACGTGATCCTTGCATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
260 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* *
14077014 TCAAAGTGTACAAGATTTTGGGACCATTTGAACAAAGTGTCCCCATTTCAGACACTTTAATGGCT
325 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
14077079 ACTGGCAGCAAACCTATAAAATCTCAAATACTTTTTAAGGGGGTGTGAGTTCTC-ATGGTTTGAT
390 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGAT
* * *
14077143 GAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCACATATCACGTGCGCACACCC
454 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCC
* *
14077208 ACCCCGACCCCCCCGATTGTCGGAACCCC-ATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGAC
519 -CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC-GTGATGCTCCGAC
**
14077272 GATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCATA
582 GATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * *
14077337 ACTCTTGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
647 ACCCTCGGTCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGC
14077383 CTAAGCAACT
Statistics
Matches: 2209, Mismatches: 228, Indels: 87
0.88 0.09 0.03
Matches are distributed among these distances:
880 24 0.01
881 470 0.21
882 2 0.00
885 7 0.00
886 1 0.00
890 1 0.00
891 59 0.03
892 46 0.02
893 221 0.10
894 55 0.02
895 1 0.00
899 234 0.11
900 39 0.02
901 217 0.10
902 359 0.16
903 190 0.09
904 5 0.00
905 276 0.12
906 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (900 bp):
CGGGCAGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGACATTTTTATGGCTTGTAAA
TTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
TCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAATGGAGTTTTGGCC
CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCC
CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGTGATGCTCCGACGATG
GTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
TCGGTCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGGCGGGATGCACAAG
CCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTACTGATCCTGCTGCCGCAACCCTCAGTCCGATC
TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGACGG
Found at i:14076493 original size:26 final size:26
Alignment explanation
Indices: 14076464--14076516 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14076454 CCGATCCGAT
*
14076464 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14076490 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14076516 C
1 C
14076517 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14078104 original size:26 final size:26
Alignment explanation
Indices: 14078075--14078127 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14078065 TCGATCCGAT
*
14078075 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
*
14078101 CTTAGATTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
14078127 C
1 C
14078128 CAAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:14079681 original size:25 final size:26
Alignment explanation
Indices: 14079639--14079690 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
14079629 CCAGTCTGAT
*
14079639 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAACGAACTCCATATG
*
14079665 CTTAGAC-GGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCATATG
14079690 C
1 C
14079691 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 17 0.71
26 7 0.29
ACGTcount: A:0.29, C:0.23, G:0.25, T:0.23
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCATATG
Found at i:14080484 original size:26 final size:25
Alignment explanation
Indices: 14080435--14080484 Score: 73
Period size: 26 Copynumber: 2.0 Consensus size: 25
14080425 GGTCCGATCG
*
14080435 TAGACTGGAATGAACTCTGCATGCT
1 TAGACTGGAATGAACTCCGCATGCT
*
14080460 TAGACTGGGAATGAACTCCGTATGC
1 TAGACT-GGAATGAACTCCGCATGC
14080485 CTAAGTCAAT
Statistics
Matches: 22, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
25 6 0.27
26 16 0.73
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (25 bp):
TAGACTGGAATGAACTCCGCATGCT
Found at i:14081551 original size:26 final size:26
Alignment explanation
Indices: 14081501--14081553 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14081491 CCAGTCTGAT
**
14081501 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14081527 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14081553 C
1 C
14081554 CTCAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14082440 original size:26 final size:26
Alignment explanation
Indices: 14082404--14082455 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
14082394 CTGGTTTGAT
14082404 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14082430 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14082456 GCTAAGTTAA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14083326 original size:26 final size:26
Alignment explanation
Indices: 14083290--14083342 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14083280 CCAGTCTGAT
14083290 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
14083316 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
14083342 C
1 C
14083343 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:14085126 original size:26 final size:26
Alignment explanation
Indices: 14085086--14085138 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14085076 GTGGTCCGAT
* *
14085086 CTTAGACTGGGAATGAACGCCGTATG
1 CTTAGACTGGCAATGAACGCCATATG
*
14085112 CTTAGACTGGCAATGAACTCCATATG
1 CTTAGACTGGCAATGAACGCCATATG
14085138 C
1 C
14085139 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACGCCATATG
Found at i:14086028 original size:26 final size:26
Alignment explanation
Indices: 14085988--14086040 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14085978 GTGGTCCGAT
* * *
14085988 CTTAGATTGGTAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14086014 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14086040 C
1 C
14086041 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14086522 original size:894 final size:893
Alignment explanation
Indices: 14078312--14090860 Score: 13221
Period size: 898 Copynumber: 14.0 Consensus size: 893
14078302 AAACGTACAA
* * * * *
14078312 GATTTTCTAAAATCTTTTCGGAAGGATTTTTGACCCCAAACCTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
14078377 GTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
14078442 AAAAGGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCCGCAAACTTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
14078507 TCTATAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* ** *
14078572 CCAGTACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGT
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGC
* * * *
14078637 CACCGGTCAAGTTCTCC-A--A--------CGATGGTGCCCCGGCGAAGAAAAATACAGCACCAG
325 CGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAG
* * *
14078691 CACATCCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATG
390 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCTGGTCCGATCTTAGACT-GGAATG
** *
14078756 AACTCCATAAGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
453 AACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
14078821 GGGCACTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGA-CTGGGTCCTCCTCTGCA
518 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCG
* * ***** * * * *
14078885 TGTTGCCGATCTTGCTGTTGTAACCCTCGATCTGGCCCGATCTTAGACTGGGAATGAACTCCATA
582 TGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
14078950 TGCCTAAGCCAACCGATGAAACGAGCGGACGGACAGGCGGGCACCACGTCGGCCAGAGAGACGGG
647 TGCCTAAGCCAACCGACGAAACGAGCGGGC-G-C-GGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14079015 ATGCGCGAGCCGTGGATCAATAGGGTGGTAGGTAGGTTTAGGCACATTTTCATATTTCTGCATGC
709 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* * * * *
14079080 CAATTCCATTTTTGTGGCTTCTAAATTGAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
774 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
14079145 GGCAAGACGACTCGTTTTATATTTTTTACGATTTTTGAAACTTTTTACGGTTCAG
839 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* ** *
14079200 GATTTTTTAAAATTTTTTTGGAAGGAGTTTTCTCCCCAAACTTGGTAGACATGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
14079265 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
14079330 AAAAAGTGTCCCCATTTCCGACACTTTTATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
14079395 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * *
14079460 CCAGCACCCATCGCACAAT-ATGTGCGCACA-CCCCCGACCCGCCCAATCGCCAGAACCCCAATG
261 CCAGCACCCATCGCAC-ATCATGTGCGCACACCCCCCGGCCC-CCCGATCGTCGGAACCCCAATG
* * * * **
14079523 CCGCCAGTCAGGTTCTCCGGCGATGCTCCGGAGATGGTGCCCCGACGAAGAGAAATGGGGCACCA
324 CCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCA
** * * * ** *
14079588 GCACATGCCTAAGCCCAGCATGTGCTACCGTAACCGTCGGTCCAGTCTGATCTTAGACTGGGAAT
389 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCTGGTCCGATCTTAGACT-GGAAT
** *
14079653 GAACTCCATATGCTTAGAC-GGGAACGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
452 GAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * *
14079717 CGGGCGCTCAGCCGGCCAGAGGGGCTGGATGCACAAGCCGGGGATCGACCGAGTCCCCCTCTGAG
517 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * ** * ** **
14079782 TGCTACCGATCCTGTTGCCACAACCCTCAATCCGGTCCAATCTTAGACTGGGAATGAACTATGTA
582 TGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* ** * *
14079847 TGCCTAAGCCAATCGACGAAACGAGCGGGCGGGCGGGCGGGCAGGCACTACGGTGTCTAGAGAGA
647 TGCCTAAGCCAACCGACGAAACGAGCGGGC--GC-GGC--G--GGCACTACGCCGGCCAGAGAGA
* *
14079912 CGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAC
705 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * **
14079977 ACGCTAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTAGCTTAAGCCTTCACGTGAAGTT
770 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * *
14080042 GCATGGCAAGATGACTCGTTTTTTATTTTTCACAATTTTTGAAACTTTTTCCGGTTCGG
835 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * *
14080101 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCATTTTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
14080166 TTGTTGGCATGCATAAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
66 TTGTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG
* *** *** ***
14080231 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCTATG-GGTCC-GT-CGGTC-CGCT
130 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC-A-GCAAACCTGTAAAATCTCAAA
** ** ** ** * * ** * **
14080292 TGGGGC-TTAGACCGGGAATGAACTC-CATATGCCTAAGTCAGCCCACGAAATGACCGTGCGAGC
193 T-GCTCTTTA-AGGGGGTGTGAGTTCTC-GAGGTTTGA-T--G---A-GGGAT-A--G-G-G-G-
* * * * ** * *
14080355 GCTCAACCGATCGGAGAGG-C-AGGATGC-GCAAGC-T-G-AGGAT--TG-GCCCGATCACCCTC
241 GC-CAA--TAT--AAG-GGCCAAGTA-CCAGCACCCATCGCA-CATCATGTGCGC-A-CACCC-C
* * * * * ** * **
14080411 TACGTGCTACTATCGGTCCGATCGTAGACTGGAATGAACTCTGC-ATGCTTAGACTGGGAATGAA
295 -CCG-GC--C---C--CCCGATCGT---C--G---GAAC-C-CCAATGC--CG-CCGGTCAGGTT
* * * *
14080475 CTCCGTATGCCTAAGTCAATACATGAAACGAGCG-TGCGGGCACTGAGCCGACCGAAGAGGCATA
338 CTCCG-A---C---G---ATGC-T---CCG-GCGATG-GTGC-C----CCGA-CGAAGA---AAA
* ** * * ** * ***
14080539 ATCCGTAAGCCAGGGATCA-ACCCG-GTCCCCTC-TGTG-TGCTGTCGGTCC-CG-CT-G-CC-A
378 ATACGGCA-CCA-GCA-CATGCCCGAG-CCCAGCATGTGCTGCCG-CAACCCTCGTCTGGTCCGA
* ** * * ** * *
14080595 -C-AACCCTCGG--T--CCGGCTG-GGGCTTA-AGCAT-GGAATGAACTCCATATGCCTAAGCCA
438 TCTTAGACT-GGAATGAAC-TCTGTATGCTTAGA-C-TGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * * *
14080651 ACCCACAAAATGAGCGTGCGGGCGCTCAGCCAGCCAGAGAGGCAGAATGCGTAAGCCAGGGATC-
499 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
* **** * * *
14080715 AGCCCAACCCCC-CTACTTGCTGTCGATCCTACATGCTCGAGCCCAGCATGTGCTGTAGTAACCC
564 ATCGGGTCCCCCTCTGCGTGCTGCCGAT-C--C-TGCT--A---C--CA----C------AACCC
* * * * *
14080779 TTGGT-TCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCAAAGCCAACCGACAAAATGAA
608 TCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC--GA--AA
* * * * * *
14080843 CGGGCGGGTGGGCTAGCGGGCACTACGCCAGCCAGAGAGACGGGTTACGCAAGCCGTGGATCGAT
668 CGAGC-GG-GCGC-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* *
14080908 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACACGCCAATGCCATTTTTATGGCTTG
730 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
** * * *
14080973 TAAATTCATACAATGGTAGCTTAAGCCTTCACGTGAAGTTGCATGGCAAGATGACACGTTTTCTA
795 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
*
14081038 TTTTTCACGATTTTTGAAACTTTTTACGGTTCGA
860 TTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * ** * * * *
14081072 GATTTTTTAAAAGGTTTTT-GGAAGGACTTTTTTCCCCTAACCTGGTAGACATGATCCTTGCATT
1 GATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * * * *
14081136 TTTGTTGGCATGCACAAAACAATTCTGCTAAAAACTCAAAGTGTACAAGATTTTATGACTATTTA
65 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG
* * *
14081201 AAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTACAAGCTCAAATG
130 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
14081266 CTCTTTAAAGGGGTGTGAGTTCTCGAGGTCTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGT
195 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
14081331 ACCAACACCCATCGCACATCATGTGCGCACACCCCCTCAGCCCCCCGATCGTCGGATCCCCAAT-
260 ACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCGATCGTCGGAACCCCAATG
* * * * *
14081395 --G-C-TTCCGG-T-T---A-GATTCTCCGACGATGGTGCCCCGACGAAGAAAAATATGGCACCA
324 CCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCA
* ** *
14081450 GCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGATCCAGTCTGATCTTAGACTGGGAAT
389 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-TCTGGTCCGATCTTAGACT-GGAAT
* * *
14081515 GAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTCAGTCAACCCATGAAACGAGCGTG
452 GAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* ** * * ** * * *
14081580 CGGCCGCTCAAACAGCCAGATGGGCAAGATGCGCAAGCAGGGGATCGGTCGGGTCCCCCTCTACG
517 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * * *
14081645 TGCTACCGATCTTGTTACCACAACCCTCGGTCTAGTCCGATCTTAGACTAGGAATGAACTCCGTA
582 TGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
14081710 TGCCTAAGCCAACCGACGAAACGAGCGAACAAGCGGGCGGGTGGGCACTACGCCGACCAGAGAGA
647 TGCCTAAGCCAACCGACGAAACGAGCG-----G-GCGC-GGCGGGCACTACGCCGGCCAGAGAGA
14081775 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
705 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
14081840 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATAGAATGGTCCCATAAGCCTTCACGTGAAGTT
770 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* *
14081905 TCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACAGTTCGG
835 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * **
14081964 GATTTTTTAAAATTTTTTTGAAAGGTTTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* **
14082029 TTGTTGGCATGTACAAAAAAATTCAGCTAAAAACTCGGAGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* *
14082094 AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
14082159 TCTTTAAGGGGGTGTGGGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATGTAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
14082224 CCAGCACCCATCGTACATCATGTGCGCACACCCCCCGGCCCCCCCGGTCGTCGGAACCCCAATGC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGC
* * * * ** * *
14082289 CACCGGTCAGGTTCTTCGGCGATGCTCCGGCGATGGTACCCCGGTGAAGTAAAATGCGGCACCAG
325 CGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAG
* * * * ** **
14082354 TACATGCCCAAGCCCAGCATGTGGTACCGCAACTTTCGGTCTGGTTTGATCTTAGACTGGGAATG
390 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCTGGTCCGATCTTAGACT-GGAATG
* * * *
14082419 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGGCTAAGTTAACCCACGAAACGAGTGTGC
453 AACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
14082484 GGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGTGT
518 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * *
14082549 GCTGCCAATCCTACTACCACAACCCTCAGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTA
583 GCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTA
* * * * *
14082613 TGCCTAAGCCAATCGACGAAAGGAGCAGGCG-GGCGGGCACTACGCCAGCCAGAGAGACGTGATG
647 TGCCTAAGCCAACCGACGAAACGAGCGGGCGCGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* * * **
14082677 CGCAAGCTGTGGATCGATAGGGTGATAGGTGGGTTTAGGTACATCTTCATATTTCTGTGTGCCAA
712 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
* * *
14082742 TGCCTTTTTTATGGCTTGTAAATTTATTCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
777 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* *
14082807 AAGACGACTCGTTTTCTATTCTTCACGATTTTTGAAACTTTTTACGGTTCGA
842 AAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * *
14082859 GATTTTTTAAAATTTTTT-TGAGAGTAGTTTTGGCCCCAAACTTGGTAG-CATGATCCTTGTCA-
1 GATTTTTTAAAATTTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-AT
* * ** * *
14082921 TTTTGTTGACATGCATAAAAAAATTCAGCTAAACCCTCGAAGTGTACAAGATTTTGTGACCTTTT
64 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTT
* *
14082986 GAAAAAAGTGTCTCCAATTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
129 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* ** *
14083051 GCTCTTTAAGGGGGGAGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAA
194 GCTCTTTAA-GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* ** * * ** * *
14083116 GGT-CGAGCACCCATCGCACATCATGCACGCACACCCCTTTCGGCCCCCACGACCACCAGAACTC
258 -GTACCAGCACCCATCGCACATCATGTGCGCACACCCC--CCGGCCCCC-CGATCGTCGGAACCC
* * * * * *
14083180 TAATGTCGCCGGTCAGG-T-T----C--T--T-CGACGATGGTGCCTCGACGAAGAAAAATGCGA
319 CAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGG
* ** *
14083234 CACCAGCACATGCCCTAGCCCAGCATGTGCTGCCGCAACCCTCGATCCAGTCTGATCTTAGACTG
384 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-TCTGGTCCGATCTTAGACT-
* *
14083299 GGAATGAACT-TCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACG
447 GGAATGAACTCT-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* ** * * ** * *
14083363 AGCGTGC-GACTGCTCAAACAGCCAGATGGGCTAGATGCGCAAGCAGGGGATCGGTCGGGTCCCC
511 AGCGTGCGGGC-GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * * * * * * *
14083427 CTCTACGTGCTGCCGATCTTGTTGCTACAACCCTCGGT-TCGATCAGATCTTAGATTGGGAATGA
575 CTCTGCGTGCTGCCGATCCTGCTACCACAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGA
* * * * *
14083491 ACTCCGTATACCTAAGCCAACCGA-TAAACGAGCAGGCAGGCGGTCGGGCAGGCATTACGTCGAC
639 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC--GCGG-CGGGCA--C--TACGCCGGC
* * * *
14083555 CAGAAAGACGGGATGCACAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTA-ACACATCTTCAT
697 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* *
14083619 ATTTCGGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
762 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * *
14083684 GCGAAGTTTCATGGCAAGACAACTCGTTTTCAATTTTTCACGATTTTTGAAACTTTTTGCGGTTC
827 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC
14083749 GG
892 GG
* ** **
14083751 GATTTTTTAAAATTTTTTCAGATTGAGTTTTGGCCCCAAACTTGGTAGACACGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
14083816 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTG-
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* * *
14083880 AAACAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
14083945 TCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
14084010 CCAGCACCCATCGCACAT-ATGTGCGCACACCCCCCGGCCCCTCCGATCGTCGGAACCCCAATGC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGC
** * * *
14084074 TTCCGGTCAGGTTCTCCGACAATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATACGCCACCAG
325 CGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAG
* * * * * * *
14084139 CACACGCCCAAGCCTAGCATGTGCTACCGTAACCCTCGGTCCGG-CCTGATCTTAGATATGGAAT
390 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCTGGTCC-GATCTTAGA-CTGGAAT
* * * * *
14084203 GAACT-TCATATGCTTAGACTGGGAATGAACTCTGGATGCCTAAGTCAACCCACGAAATGAACGT
452 GAACTCT-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * *
14084267 GCGGGTGCTCAGTCGGCCAGAGGGTCGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTG-
516 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGC
* ** * * * * *
14084331 GTGCTGTCGATCCTGCTACTGCAATCATTGGCCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
581 GTGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
14084396 ATGCCTAAGTCGACCGACGAAACGAGCGGACGGACGGGCGGGCGGGCACTACGCCGGCTAGATAG
646 ATGCCTAAGCCAACCGACGAAACGAGC-G--GG-C--GC-GGCGGGCACTACGCCGGCCAGAGAG
* * * * *
14084461 ACGGGATGCCCCAGCCGTGGATCGATAGGGTGGGAGGTGGGTTTAGGCACATCTTTATATTTTTG
704 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
**
14084526 TGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
769 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * * * * *
14084591 TTCATGGCAAGACGACCCGTTTTCCATTTTTCATGATTTTTTAAACATTTTACGGTTTGA
834 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* *
14084651 GATTTTTTAAAAGTTTTTT-GGAAGGAGTTTTGG---C---CTTGGAAGACATGATCCTTGT-TT
1 GATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* **
14084708 TTCTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCTTAGTGTACAAGATTTTGTGACCATTT
65 TT-TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTT
14084773 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
129 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
*
14084838 GCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
194 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * * ** ** *
14084903 TACCAGCACCCATCACAAATCACGTGTGCACACCCCCTCCACCCCCTCGATCACCGGAAGCCCAA
259 TACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCC-CGATCGTCGGAACCCCAA
* * *
14084968 TGCCGCCGGTCAGGTTCTCCGACGATGCTCTGGTGATGGTGCCCCGACGAAGAAAAATACGACAC
322 TGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCAC
* * * * *
14085033 CAACACATGCCCAAGCCCAACATGTGCTGTCGCAACCCTCGGTGTGGTCCGATCTTAGACTGGGA
387 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCTGGTCCGATCTTAGACT-GGA
* * * *
14085098 ATGAACGCCGTATGCTTAGACTGGCAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCG
450 ATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * *** *
14085163 TGCGGGTGCTCAGCAGGCCAGAGGGGCGGGATGCACAAATTGGGGATCGACCGGGTCCCCCTCTG
515 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTG
* * * * *
14085228 CGTGGTGCCGATCCTGCTGCCACAATCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCT
580 CGTGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCG
* *
14085293 TATGCCTAAGCCAACCGACGAAACGAGGGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGG
645 TATGCCTAAGCCAACCGACGAAACGA----GCGGGC--GC-GGCGGGCACTACGCCGGCCAGAGA
* *
14085358 GATGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
703 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
14085423 GCATGCCAATGACATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
768 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * *
14085488 TTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGG
833 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * * *
14085549 GATGTTTTAAAATTTTTTTGGAAGGCGTTTTGGCCCCAAACTTGCTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
14085614 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGGGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* * *
14085679 AAAAATTGTCCACATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
14085744 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
14085809 CCAGTACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGTC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC
* * * * *
14085874 GCCGGTCAGGTTCTCCGACGATGCTCCGGTGATGGTGACCCGACGAAGAATAATGCGGCACTAGC
326 GCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGC
***** * *
14085939 ACATGCCCGAGCCCAGCATGTGCTATTAAAACCCTCGATGTGGTCCGATCTTAGATTGGTAATGA
391 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-TCTGGTCCGATCTTAGACTGG-AATGA
* * *
14086004 ACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCATGCG
454 ACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * ** *
14086069 GGCACTCAACCAGCCAGAGGGGCGGGAGGCATAAGCCGGGGATTGATCGGGTCCCCCTCTGCGTG
519 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTG
* * * * * * * *
14086134 GTACCGATCCTACTACCATAACCCTCGGTTTGGTCAGATCTTAGACTGGGATTGAACTTCGTATG
584 CTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14086199 CCTATGCCAACCGATGAAACGAGTGGGC-CAGCGGGCACTACACCGGCCAGAGAGACGGGATGCG
649 CCTAAGCCAACCGACGAAACGAGCGGGCGCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * * * *
14086263 TAAGCTGTGGATCGATAGGGTGGTAGGTAGGTTTAGCCACATCTTCATATTTATGCATGCCAATG
714 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* *
14086328 CCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
779 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * ** ** **
14086393 GATGACTCG-TTTCGTATTTTTCACAATTTTCAAAACTTTTTGGGGTTCAA
844 GACGACTCGTTTTC-TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* *
14086443 GATTTTTTAAAATATTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTCTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
14086508 TTTTTGGCATGCACAAAAAAATTTAGGTAAAAACTTAAAGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG-
* * * *
14086573 AAAAAATATGTCCCCATTTTAGACATTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAAT
130 AAAAAA-GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * * *
14086638 GCTCTTTAAGGGGGTGTGAGTTCTCAAGGTATGATGACGGATAGGGGGCTAATAATATAAGGGCC
194 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC---CAATATAAGGGCC
** * * * *
14086703 AAGTACCAGCACCCATCTTACAT-ATTTGCGCACACCCCCCGGCCCCCCGATCGCCAGAACACCA
256 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCA
* ** * * *
14086767 ATGCCGTCGGTCAGGTTCT-TTATTGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGCGGC
321 ATGCCGCCGGTCAGGTTCTCCGA-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGC
* * * *
14086831 ACCAGCACATGCCCGAGCTCAGCATGTGCTACCACAACCCTCGGT-TCGGTCCCATCTTAGACTA
385 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCT-GGTCCGATCTTAGACT-
*
14086895 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
447 GGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * * *
14086960 GCGAGAGGGCGCTCAGCCGGCCAGAGGGGTGGGATCCGCGAGCTGGGGATCGGTCGGGTCCCCCT
512 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCT
* * * * * *
14087025 CTACGTGGTACCGATCCTACTACCGCAACCCTCGGTTTGGT-TGGATCTTAGACTGGGAATGAAC
577 CTGCGTGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAAC
* * * * * * * * * *
14087089 GCCATATGCCTATGCCGACCGATGAAATGAGCGGGCG-GGCAGGCATTACGCCGGTCTGAGAGAC
641 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGCGGCGGGCACTACGCCGGCCAGAGAGAC
* * * * *
14087153 GGGATACGTAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAGCCACATCTTCATATTTTTGCA
706 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* *
14087218 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAGGCCTTCACGTGAAGTTT
771 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* **
14087283 CATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGGGGTTCGG
836 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
14087341 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
14087406 TTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
14087471 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
14087536 TCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
**
14087601 CC-GCACCCATCGCACATCATGTGCGCACACCCCCTCCGGCCCCCCCGATCACCGGAACCCCAAT
261 CCAGCACCCATCGCACATCATGTGCGCACA-CCCC-CCGG-CCCCCCGATCGTCGGAACCCCAAT
* * * * * *
14087665 GCCGTCGGTCAGGTTCTCTGATGATGCTCTGGCGATGGTGCCCCGGCAAAGAAAAATACGGCACC
323 GCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACC
* *
14087730 AGCACATGCCCGAGCCCAACATGTGCTGCTGCAA-CC-C-TC--G---G-TC-----C--G---G
388 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCTGGTCCGATCTTAGACTGGAATG
* *
14087776 ---TCTG-AT-CTTAGACTGGGAATGAACTTCGTATACCTAAGTCAACCCACGAAACGAGCGTGC
453 AACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * ** ** *
14087836 GGGCGCTCAGTCAGCCAGAAGGGTAGGATAAGCAA-CTCGGGGATCGA-CTGGCTCCCCCTCTGC
518 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC-CGGGGATCGATC-GGGTCCCCCTCTGC
* * * * *
14087899 GTGCTGCCAATCCTGCTGCCGCAACCCTCGGTCCGGTCTTATCTTAGACTGGGAATGAACTCCGT
581 GTGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * * *
14087964 GTGCCTAAGCCAACCGACGAAATGAGTAGGCGGGCGGGCGAGTGGGCACTACGTCAGCCAGAGAG
646 ATGCCTAAGCCAACCGACGAAA--CG-A-GCGGGC--GCG-GCGGGCACTACGCCGGCCAGAGAG
* * * *
14088029 ACGGGAAGCACAAGCCGTGGATCGATAGGGAGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA
704 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
** * *
14088094 TGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTGAAGCCTTTACGTGAAGT
769 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* *
14088159 TTGATGGCAAGACGACTCATTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
834 TTCATGGCAAGACGACTC-GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
** *
14088220 GATTTTTTAAAATTTTTTCGGAAGCCGTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
14088285 TTGTTGACATGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGGGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* * *
14088350 AAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGAAAAATCTTAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
14088415 TCTTTAAGGGGGTGTGAGCTCTTGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
14088480 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCATCGGAAGCCCAATGC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATCGTCGGAACCCCAATGC
* * **
14088545 CGCCAGTCAGGTTCT-C--CGA---T-----GATGGTGCCCCGATGAAGAAAAATACGGTGCCAG
325 CGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAG
* * *
14088599 CACATG-CTGAGCCCAGCATCTGCTGCTGCAA-CC-C-T-TGGTCCGATC-----C------G-A
390 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCTGGTCCGATCTTAGACTGGAATGAA
* *
14088647 -TC----T-C--AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAACGTGCGG
455 CTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * *
14088704 GCGCTCAGCTGGCCAGACGGGCGGGATGCGCAAG-CGAGGGTTCGATTGGGTCCCCCTCTGCGTG
520 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG-GGGATCGATCGGGTCCCCCTCTGCGTG
* * * * * * * *
14088768 CTGTCGATCCTGCTACTATAACCTTCGGTCTGGTCCGATCTTAGATTAGGAATGAACTCCATATG
584 CTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14088833 CCTAAGCCAATCGACGAAACGAGCGGGCGGGCGGGCGGGCGGACGGGTGGGCGGGCACTACACTA
649 CCTAAGCCAACCGACGAAACGAGCGGGC--GC-GGCGGGC--AC---T--------AC-GC-C-G
* * *
14088898 GCCAGAGAGATGGGATACGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
695 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * * * *
14088963 ATATTTCTGCGTGGCAATGCCATTTTTATGGATTGTAACTTCATACAATGGTCCCCTAAGCCTTC
760 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
14089028 ACGTGAAGTTTCATGGCAAGACGA--C----TC-A-TTTT--C------T----CTTTTT-C---
825 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGT
*
14089069 AC--
890 TCGG
* *
14089071 G----------A--TTTTCGGAAGGAGTTTTGGCCCTAATCTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
14089124 TTGTTGGCATGCACAAAGAAATTTAGCTAAAAACTTAAAGTGTACAAGATTTTTTGACCATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* *
14089189 AAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTTGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
14089254 TCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * *
14089319 CCAACACCCATCTCACATCTTGTGCGCACACCCGCCCCGGCCCCCCCAATCG-CTGGAACCCCAA
261 CCAGCACCCATCGCACATCATGTGCGCACA-CC-CCCCGG-CCCCCCGATCGTC-GGAACCCCAA
* * ** * ** *
14089383 TGCCGTCGGTTAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATACGACAC
322 TGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCAC
*
14089448 CAGCACATGCCCGAGCTCAGCATGTGCTGCCGCAA-CC-C-TC--G---G-TC-----C------
387 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCTGGTCCGATCTTAGACTGGAAT
* * ** *
14089493 G-A-TCTG-AT-CTTAGACTGGGAATGAACTCCATATGCCTGAGTTC-AGTCACAAAACGAGCGT
452 GAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG-TCAACCCACGAAACGAGCGT
* * * * * ***
14089553 TCGGGCGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCTGGTCCCCCTCCAT
516 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGC
* * * * * * * * * * ** * * *
14089618 GTCCTACTGATCCTGCTGCCGCAACCCACTGCCCGATCCAATCTTAGACTGGAAATAAACTTCGT
581 GTGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
14089683 ATGCCTAAGCCAACCGACGAAATAAGCGGGTGGGCGGTCGGGCGGGCACTACGTCGGCCAGAAAG
646 ATGCCTAAGCCAACCGACG--A-AA-CGAGCGGGC-G-C-GGCGGGCACTACGCCGGCCAGAGAG
*
14089748 ACGGGAAT-CGCAAGCCGTGGATCGATAGGGTGGTACGTGGGTTTAGGCACATCTTCATATTTCT
704 ACGGG-ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
14089812 ACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGGCCCTTAAGCCTTCACGTGAAG
768 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * * * *
14089877 TTTCAAGGCAAGACAACTCATTTTCTATTTTTCATGATTTTTGAAACTTCTTACGGTTCGA
833 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * * ** *
14089938 GATTTTTTAAACTTTTTTCGGAAGGATTTTTGGCCCAAAACTTTTTAGACGTAATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * **
14090003 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGGGTACAAGATTTTGTGATAATTTGA
66 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
* *
14090068 AAAAAGTGTCACCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
14090133 TCTTTAAGGGGGTGTGAGTTCTCCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * *
14090198 CCAGCACCCATCACACATCATGTGCACACA-CCCCCTGCCCCCTCGATCG-CTGGAACTCCAAAG
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC-CGATCGTC-GGAACCCCAATG
* * ** * * * * ** **
14090261 CCGTCGGTCAGGTTCTCTGGTGGTGCTCTGGCGATGGTTCCTCGGTGAAGAAAAATAAAGCACCA
324 CCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCA
14090326 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTCGTCTGGTCCGATCTTAGACTGGGAAT
389 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC-TCGTCTGGTCCGATCTTAGACT-GGAAT
* * *
14090391 GAACTCCT-TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGTGT
452 GAACT-CTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * * * *
14090455 GCAGGCGTTCAGCCGGCCAGAGGGTCGGGATGCACAAGCCGGGGAACGATCAGGTCCCCCTCTGT
516 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGC
* ** * * *
14090520 GTGCTACCGATCCTGCTACCGTAACCCTCGGTTTGGTCTGATCTTAGACTAGGAATGAACTCCGG
581 GTGCTGCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* *
14090585 ATGCCTAAGCGAACCGACGAAACGAGCGGGCGAGCGGACGGGCTGACGGGAGGGCGGGAACTACG
646 ATGCCTAAGCCAACCGACGAAACGAGCGGGC--GCGG-CGGGC--AC--TA---C--G--C--CG
* * * * * * *
14090650 TCAACCGGAGAGACGAGATACGTAAGCCTTGGATCGATAGGGTGCTAGGTGGGTTT-GGCACATC
695 ---GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * * *
14090714 TTCATATTTGTTCGTACCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
757 TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * * *
14090779 TTCACGTGAAGTTTAAGGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTAC
822 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
*
14090844 GGTTCAG
887 GGTTCGG
14090851 GATTTTTTAA
1 GATTTTTTAA
14090861 TGGCTACTGG
Statistics
Matches: 9850, Mismatches: 1368, Indels: 861
0.82 0.11 0.07
Matches are distributed among these distances:
839 252 0.03
840 3 0.00
841 172 0.02
842 10 0.00
843 1 0.00
844 4 0.00
847 3 0.00
848 8 0.00
849 5 0.00
851 3 0.00
852 38 0.00
853 177 0.02
854 4 0.00
855 3 0.00
856 5 0.00
857 23 0.00
861 6 0.00
862 16 0.00
863 2 0.00
864 3 0.00
865 3 0.00
866 192 0.02
867 39 0.00
868 2 0.00
869 6 0.00
870 172 0.02
871 10 0.00
872 5 0.00
873 1 0.00
874 6 0.00
875 10 0.00
876 111 0.01
877 11 0.00
878 324 0.03
879 544 0.06
880 29 0.00
881 1 0.00
882 1 0.00
885 16 0.00
886 265 0.03
887 42 0.00
888 305 0.03
889 11 0.00
890 19 0.00
891 79 0.01
892 789 0.08
893 161 0.02
894 527 0.05
895 473 0.05
896 332 0.03
897 474 0.05
898 1160 0.12
899 308 0.03
900 174 0.02
901 292 0.03
902 569 0.06
903 307 0.03
904 244 0.02
905 6 0.00
906 1 0.00
907 8 0.00
908 4 0.00
909 10 0.00
910 7 0.00
911 84 0.01
912 9 0.00
913 158 0.02
914 49 0.00
915 5 0.00
916 8 0.00
917 4 0.00
918 4 0.00
919 9 0.00
920 5 0.00
921 2 0.00
922 1 0.00
924 1 0.00
925 1 0.00
926 7 0.00
928 1 0.00
929 1 0.00
930 1 0.00
933 1 0.00
934 4 0.00
935 5 0.00
936 1 0.00
937 2 0.00
938 12 0.00
939 3 0.00
942 2 0.00
944 1 0.00
945 1 0.00
947 8 0.00
948 3 0.00
949 2 0.00
950 11 0.00
951 17 0.00
952 88 0.01
953 13 0.00
954 9 0.00
955 10 0.00
956 10 0.00
957 6 0.00
958 9 0.00
959 9 0.00
960 2 0.00
961 4 0.00
962 9 0.00
963 10 0.00
964 10 0.00
965 4 0.00
968 2 0.00
969 3 0.00
970 85 0.01
971 330 0.03
972 11 0.00
973 2 0.00
975 10 0.00
976 2 0.00
977 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (893 bp):
GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC
GCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGC
ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCTGGTCCGATCTTAGACTGGAATGAAC
TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
GCCGATCCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
TAAGCCAACCGACGAAACGAGCGGGCGCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
Found at i:14086924 original size:26 final size:26
Alignment explanation
Indices: 14086886--14086938 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14086876 TCGGTCCCAT
14086886 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14086912 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14086938 C
1 C
14086939 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14088864 original size:4 final size:4
Alignment explanation
Indices: 14088855--14088888 Score: 50
Period size: 4 Copynumber: 8.5 Consensus size: 4
14088845 GACGAAACGA
* *
14088855 GCGG GCGG GCGG GCGG GCGG ACGG GTGG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GCGG GCGG GC
14088889 ACTACACTAG
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
4 26 1.00
ACGTcount: A:0.03, C:0.24, G:0.71, T:0.03
Consensus pattern (4 bp):
GCGG
Found at i:14090413 original size:26 final size:26
Alignment explanation
Indices: 14090377--14090429 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14090367 CTGGTCCGAT
*
14090377 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14090403 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14090429 C
1 C
14090430 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14091168 original size:26 final size:26
Alignment explanation
Indices: 14091132--14091184 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14091122 CCAGTCTGAT
*
14091132 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14091158 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14091184 C
1 C
14091185 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:14092063 original size:26 final size:27
Alignment explanation
Indices: 14092027--14092084 Score: 100
Period size: 26 Copynumber: 2.2 Consensus size: 27
14092017 CTGGTCTGAT
14092027 CTTAGACTGGGAATGAACTCCATATG-
1 CTTAGACTGGGAATGAACTCCATATGC
*
14092053 CTTAGACTGGGAATGAACTCCGTATGC
1 CTTAGACTGGGAATGAACTCCATATGC
14092080 CTTAG
1 CTTAG
14092085 CTAACCGACG
Statistics
Matches: 30, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
26 25 0.83
27 5 0.17
ACGTcount: A:0.28, C:0.21, G:0.24, T:0.28
Consensus pattern (27 bp):
CTTAGACTGGGAATGAACTCCATATGC
Found at i:14092732 original size:736 final size:736
Alignment explanation
Indices: 14091316--14092847 Score: 2205
Period size: 736 Copynumber: 2.1 Consensus size: 736
14091306 CTGGTCCGAT
* * *
14091316 CTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAACGAACGGGCGGGCGGGCACT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCGACGAAACGAGC-GGCGGGCGGGCACT
* * *
14091381 ACGTCGGCCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTATGTGGGTTTAGGCAC
65 ACGCCAGCCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
14091446 ATCTTCATATTTCTGCATGCCAATGCCATTTTTAAGGATTGTAAATTCATACAATGGCCCCTTAA
130 ATCTTCATATTTCTGCATGCCAATGCCATTTTTAAGGATTGTAAATTCATACAATGGCCCCTTAA
14091511 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTGTCAAAACTTTT
195 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTGTCAAAACTTTT
* * *
14091576 TGCAGTTCGAGATTTTTTAAAATTTTTTCGAAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGGT
260 TACAGTTCGAGATTTTTTAAAATCTTTTCGAAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * *
14091641 CCTTGTATTTTTTTTCGTATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGT
325 CCTTGTATTTTTGTTCGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGT
* * ** * *
14091706 GACCATTTGAAATAAGTGTCCCCATTTCAAACATTTTATTGGCTACTAGTAGCAAACCTGTAACA
390 GACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACTAGCAGCAAACCTGTAAAA
* * *
14091771 TTTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGACGAGGGATACGGGGCCAATATAA
455 TCTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGACGAGGGACAAGGGGCCAATATAA
* * * **
14091836 GGGCCAAGTACTAACACCCATCGTACATCATGTCTGCACTCCCCCCTCGACCCCCCGATCGTTGG
520 GGGCCAAGTACCAACACCCATCGCACATCATGTCTGCACACCCCCCTCGACCCCCCGATCCCTGG
* * * *
14091901 AACCCCAATGCCGCCAGTTAGGTTCTTCGACGATGCTCAGGCGATGGTGACCCGACGAAGAAAAA
585 AACCCAAATGCCACCAGTCAGGTTCTTCGACGATGCTCAGACGATGGTGACCCGACGAAGAAAAA
* * ** *
14091966 TACATCACGAGCACATGCCTGAGGCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTA
650 TACAGCACCAGCACATGCCCAAGGCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTA
*
14092031 GACTGGGAATGAACTCCATATG
715 GACTAGGAATGAACTCCATATG
*
14092053 CTTAGACTGGGAATGAACTCCGTATGCCTTAGCTAACCGACGAAACGAGCGGACGGGCGGGCACT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCGACGAAACGAGCGG-CGGGCGGGCACT
* * * *
14092118 ATGCCAGCCAGAGAGAC-AGGATGCGCAAGCTGTGGATCGATGGGGTGGTAGGTGGGTTCT-GGC
65 ACGCCAGCCAGAGAAACGA-GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT-TAGGC
** * * *
14092181 ACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
128 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTAAGGATTGTAAATTCATACAATGGCCCCTT
* * * **
14092246 AAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
193 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTGTCAAAACTT
* * * * *
14092311 TTTACGGTTCGAGATTTTTTAAAA-CTTTTCGAAAGGATTTTTGGTCCCAAACTTGGTAGATGTG
258 TTTACAGTTCGAGATTTTTTAAAATCTTTTCGAAAGAAGTTTTGGCCCCAAACTTGGTAGACGTG
* ** *
14092375 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAATGCTCGAAGTGTACAAGATTTT
323 ATCCTTGTATTTTTGTTCGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTT
* *
14092440 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAGCAAACCTGTAA
388 GTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACTAGCAGCAAACCTGTAA
* * *
14092505 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGACAAGGGGCCAATAT
453 AATCTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGACGAGGGACAAGGGGCCAATAT
*
14092570 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC-GCACACCCCCC-CGACCCCCCTGATCC
518 AAGGGCCAAGTACCAACACCCATCGCACATCATGT-CTGCACACCCCCCTCGACCCCCC-GATCC
* * * *
14092633 CTGGAACCCAAATGCCACCGGTCAGGTTCTTTGGCGATGCTTC-GACGATGGTGCCCCGACGAAG
581 CTGGAACCCAAATGCCACCAGTCAGGTTCTTCGACGATGC-TCAGACGATGGTGACCCGACGAAG
* ** * *
14092697 AAAAATACGGCACCAGCACATGCCCAATTCCAGCATGTGCTGCCGTAACTCTCGGTCCGGTCTGA
645 AAAAATACAGCACCAGCACATGCCCAAGGCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGA
* * * * *
14092762 TGTTGGACTAGGAATGAATTGCGTATG
710 TCTTAGACTAGGAATGAACTCCATATG
*
14092789 CTTAGACTGGGAATGAACTCCGTATGCCTAAG-TCAACCCACGAAACGAGCGTGCGGGCG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCT-AACCGACGAAACGAGCG-GCGGGCG
14092848 CTCAGCCGGC
Statistics
Matches: 705, Mismatches: 82, Indels: 17
0.88 0.10 0.02
Matches are distributed among these distances:
735 10 0.01
736 438 0.62
737 256 0.36
738 1 0.00
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.27
Consensus pattern (736 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCGACGAAACGAGCGGCGGGCGGGCACTA
CGCCAGCCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
TCTTCATATTTCTGCATGCCAATGCCATTTTTAAGGATTGTAAATTCATACAATGGCCCCTTAAG
CCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTGTCAAAACTTTTT
ACAGTTCGAGATTTTTTAAAATCTTTTCGAAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATC
CTTGTATTTTTGTTCGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTG
ACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACTAGCAGCAAACCTGTAAAAT
CTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGACGAGGGACAAGGGGCCAATATAAG
GGCCAAGTACCAACACCCATCGCACATCATGTCTGCACACCCCCCTCGACCCCCCGATCCCTGGA
ACCCAAATGCCACCAGTCAGGTTCTTCGACGATGCTCAGACGATGGTGACCCGACGAAGAAAAAT
ACAGCACCAGCACATGCCCAAGGCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAG
ACTAGGAATGAACTCCATATG
Found at i:14093699 original size:26 final size:26
Alignment explanation
Indices: 14093663--14093713 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
14093653 CTAGTCCAAT
*
14093663 CTTAGACTGGGAATGAACTCCGTATC
1 CTTAGACTGGGAATCAACTCCGTATC
14093689 CTTAGACTGGGAATCAACTCCGTAT
1 CTTAGACTGGGAATCAACTCCGTAT
14093714 GCGTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.24, G:0.22, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATC
Found at i:14094453 original size:904 final size:897
Alignment explanation
Indices: 14092053--14094591 Score: 3528
Period size: 901 Copynumber: 2.8 Consensus size: 897
14092043 ACTCCATATG
* *
14092053 CTTAGACTGGGAATGAACTCCGTATGCCTTAGCTAACCGACG-AA-A-CGA---GCGGACGGGCG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAGAGCGACGGGCGGACGGGCG
* * *
14092112 GGCACTATGCCAGCCAGAGAGACAGGATGCGCAAGCTGTGGATCGATGGGGTGGTAGGTGGGTTC
66 GGCACTACGCCAGCCAGAGAGACGGGATGCACAAGCTGTGGATCGAT-GGGTGGTAGGTGGGTT-
**
14092177 T-GGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
129 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
*
14092241 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGA
194 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
* **
14092306 AACTTTTTACGGTTCGAGATTTTTTAAAACTTTTCGAAAGGATTTTTGGTCCCAAACTTGGTAGA
259 AACTTTTTGCGGTTCGAGATTTTTTAAATTTTTTCG-AAGGATTTTTGGTCCCAAACTTGGTAGA
* * **
14092371 TGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAATGCTCGAAGTGTACAAGA
323 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGA
*
14092436 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAGCAAACCT
388 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
14092501 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGACAAGGGGCCA
453 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-TCAGGTTTGATGAGGGATAAGGGGCCA
*
14092566 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCTGAT
517 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGACCCCCCCGAT
* * * *
14092631 C-CCTGGAACCCAAATGCCACCGGTCAGGTTCTTTGGCGATGCTTCGACGATGGTGCCCCGACGA
581 CGTC-GGAACCCAAATGCCGCCGGTCAGGTTCTTTGGCGATGCTCCGACGATGGTGCCCCGGCGA
** * *
14092695 AGAAAAATACGGCACCAGCACATGCCCAATTCCAGCATGTGCTGCCGTAACTCTCGGTCCGGTCT
645 AGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCT
* * * * * * *
14092760 GATGTTGGACTAGGAATGAATTGCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
710 GATCTTAGACTGGGAATGAACTCCGTATCCTTAGACTGGGAATCAACTCCGTATGCCTAAGTCAA
* *
14092825 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGTCAGGATGCGCAAGTCGAGGACTGG
775 CCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGTCAGGATGCGCAAGCCGAGGACTGG
* * * *
14092890 CTGGGTCCCCCTCTGCGTCCTGCTAATCCTACTACCATAACCCTCAGTTCGGTTTAAT
840 CTAGGTCCCCCTCGGCGTCCTGCCAATCCTACTACCATAACCCTCAGTTCGGTCTAAT
* * * * *
14092948 CTTAGACTGGGAATG-ACTCCATATGCCTAAGCCAACTGACGAAACGAGTGGGCGGGTGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-GAG-CGACGGGCGGACGGG
* *
14093012 TGGGCACTACGTC-GACCAGAGAGACGGGATGCACAAGCTGTGGATCGATAGGGTGGTAGGTGGG
64 CGGGCACTACGCCAG-CCAGAGAGACGGGATGCACAAGCTGTGGATCGAT-GGGTGGTAGGTGGG
* * *
14093076 TTTAAGCACATCTTCATATTACAGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
127 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
14093141 GTCCCTTAACCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTT
192 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * * * * **
14093206 GAAACTTTTTGCAGTTTGAGA-TTTTTAAATTTTTTTGGAAAGAGTTTTGGCCCCAAATTTTTTA
257 GAAACTTTTTGCGGTTCGAGATTTTTTAAA-TTTTTTCGAAGGATTTTTGGTCCCAAACTTGGTA
14093270 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAA
321 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAA
* * *
14093335 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGAAAAC
386 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
14093400 CTGTAAAATCTCAAATGCTCTCTAAGGGGGTGTGAGTTCTCGAGGATTGATGACGGAT-AGGAGG
451 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAAGG-GG
* *
14093464 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACACCTCCG
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCG
* * * *
14093529 ATCGTCGGAACCCCAATGCCGTCGGTCAGGATCTTTGGCGATGCTCCGGCGATGGTGCCCCGGCG
579 ATCGTCGGAACCCAAATGCCGCCGGTCAGGTTCTTTGGCGATGCTCCGACGATGGTGCCCCGGCG
** * *
14093594 AAGAAAAATACGGCACCAGCACATGCCTGAGCCCAACATGTGCTGCCGTAACCCTCGGTCTAGTC
644 AAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTC
** *
14093659 CAATCTTAGACTGGGAATGAACTCCGTATCCTTAGACTGGGAATCAACTCCGTATGCGTAAGTCA
709 TGATCTTAGACTGGGAATGAACTCCGTATCCTTAGACTGGGAATCAACTCCGTATGCCTAAGTCA
* * * * *
14093724 ACCCATGAAATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGT-GGGATGCGCAAGCCGGGGATT
774 ACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGA-GGGTCAGGATGCGCAAGCCGAGGACT
* ** * * * *
14093788 GG-TCAGGTCTCCCTCGGCGTGTTGCCGATCCTGCTACCGTAACCCTC-GATTCGGTCTGAT
838 GGCT-AGGTCCCCCTCGGCGTCCTGCCAATCCTACTACCATAACCCTCAG-TTCGGTCTAAT
*
14093848 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGCGATCGGGCGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-GAGCGA-CGGGCGGACGGG
* * *** *
14093913 CGGGCAGTACGCCAGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATGTGGTGGTATAAGCGT
64 CGGGCACTACGCCAGCCAGAGAGACGGGATGCACAAGCTGTGGATCGATG-GGTGGTAGGTGGGT
*
14093978 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATCCATACAATGG
128 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
14094043 TCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTATATTTTTTACGATTTTTG
193 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* *
14094108 AAAGTTTTTGCGGTTCGGGATTTTTTTAAATTTTTTCAGAAGGATTTTTGGTCCCAAACTTGGTA
258 AAACTTTTTGCGGTTCGAGA-TTTTTTAAATTTTTTC-GAAGGATTTTTGGTCCCAAACTTGGTA
* * * * *
14094173 GACGTGATCGTTATATTTTTTTTTTTGCATGCA-AAAAAAATTCAGTTAAAAATTCGAAGTGTAC
321 GACGTGATCCTTGTA--TTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTAC
* *
14094237 AAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAA
384 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
14094302 ACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTCACGGTTTGATGAGGGTTAAGGG
449 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCA-GGTTTGATGAGGGATAAGGG
* * * * *
14094367 GCCAATATAAGAGCCGAGTACCAGCACCCATTGCACATCATGTTCGCACACCCCCCGGCCCCCCC
513 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCC
** * * * * *
14094432 GATCGTCGGAACCGTAATGCCGCCAGTCAGGTTCTCTAGCGATGCTCCGACTATGGTGCCCCGGT
578 GATCGTCGGAACCCAAATGCCGCCGGTCAGGTTCTTTGGCGATGCTCCGACGATGGTGCCCCGGC
* * * * *
14094497 GAAGAAAATTATGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCTGCAACCCTTGGT-TCGG
643 GAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGTAACCCTCGGTCT-GG
* *
14094561 TCTGAGCTTAGACTGGGAATGAACTCAGTAT
707 TCTGATCTTAGACTGGGAATGAACTCCGTAT
14094592 GCCTAAGCCA
Statistics
Matches: 1441, Mismatches: 174, Indels: 49
0.87 0.10 0.03
Matches are distributed among these distances:
894 22 0.02
895 17 0.01
897 1 0.00
899 3 0.00
900 298 0.21
901 488 0.34
902 214 0.15
903 44 0.03
904 337 0.23
905 17 0.01
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (897 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAGAGCGACGGGCGGACGGGCG
GGCACTACGCCAGCCAGAGAGACGGGATGCACAAGCTGTGGATCGATGGGTGGTAGGTGGGTTTA
GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
CTTTTTGCGGTTCGAGATTTTTTAAATTTTTTCGAAGGATTTTTGGTCCCAAACTTGGTAGACGT
GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTT
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAGGTTTGATGAGGGATAAGGGGCCAATAT
AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCGTCG
GAACCCAAATGCCGCCGGTCAGGTTCTTTGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAA
ATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTT
AGACTGGGAATGAACTCCGTATCCTTAGACTGGGAATCAACTCCGTATGCCTAAGTCAACCCACG
AAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGTCAGGATGCGCAAGCCGAGGACTGGCTAGGT
CCCCCTCGGCGTCCTGCCAATCCTACTACCATAACCCTCAGTTCGGTCTAAT
Found at i:14096831 original size:706 final size:707
Alignment explanation
Indices: 14095403--14096853 Score: 2173
Period size: 706 Copynumber: 2.0 Consensus size: 707
14095393 ACCTCAGTCT
* *
14095403 AGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTATGCCAACTGACGAAATGAACGGGTGGG
1 AGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAACGGGT--G
* * *
14095468 CGGGTGGGAGGGCGGGCAATACTTCGGCCAGAAAGATGGGATGCACAAGCCGTGGATCGATAGGG
64 -GGGTGGGAGGGCGGGCAATACGTCGGCCAGAAACACGGGATGCACAAGCCGTGGATCGATAGGG
* * ** *
14095533 TGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCCTGTAAA
128 TGGTAGGTGGGCTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCCTGTAAA
*
14095598 TTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGTCGACTCGTTTTCTATTTT
193 TTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * *
14095663 TCATAATTTTTAAAACTTTTTGTGGTTCTGGATTTTCTAAAATTTTTTCAAAAGGAGTTTTGTCC
258 TCACAATTTTTAAAACTTTTTATGGTTCTGGATTTTCTAAAATTTTTTCAAAAGGACTTTTGGCC
* **
14095728 CCAAACTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACT
323 CCAAACTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCAAAAAACAAAACAGCTAAAAACT
* *
14095793 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
388 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATAGCTA
* *
14095858 CTGGCAGCCAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGA
453 CTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATGA
14095923 GGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACTCATCGCACATCATGTGCGTACACCCCC
518 GGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACTCATCGCACATCATGTGCGTACACCCCC
* * * ** ***
14095988 TGGCCCCCCGATCGTCGGAACCCAATTGCTGCCGGTTAGGTTCTTCGACGATGGTGTCCCGGGGA
583 TGGCCCCCCGATCGTCGGAACCCAATTGCCGCCGGTCAGGTTCTCCGACGATGGTACCCCCACGA
* * * * *
14096053 AGAAAAATGTGGCACCAGCACATGGCTGAGCCCAGTATGTGCTGCCGCAACCCTCGATCC
648 AGAAAAATGCGGCACCAGCACATGCCGGAGCCCAGCATGTGCTGCCACAACCCTCGATCC
** *
14096113 AGTCAAATCTTAGACTGGGAATGAACAT-CGTATGCCTAAGCCAACTGACGAAACGAACGGGT-G
1 AGTCTGATCTTAGACTAGGAATGAAC-TCCGTATGCCTAAGCCAACTGACGAAACGAACGGGTGG
* * * *
14096176 GGTGGGCGGGCGGGCACTACGTCGGCCA-AAGACACGGGATGCGCAAGTCGTGGATCGATAGGGT
65 GGTGGGAGGGCGGGCAATACGTCGGCCAGAA-ACACGGGATGCACAAGCCGTGGATCGATAGGGT
* *
14096240 GGTAGGTGGGCTTAGGCACATCTTCATATTTCTGCATGCCAATTCCATTTTCATGGCTTGTAAAT
129 GGTAGGTGGGCTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCCTGTAAAT
* *
14096305 TCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
194 TCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * *
14096370 CACGATTTTTTAAACTTTTTATGGTTC-GAGATTTTCTAAAATTTTTTCAGAAGGACTTTTGGCC
259 CACAATTTTTAAAACTTTTTATGGTTCTG-GATTTTCTAAAATTTTTTCAAAAGGACTTTTGGCC
* *
14096434 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAGAAAACAGCTAAAAAC
323 CCAAACTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCA-AAAAACAAAACAGCTAAAAAC
* *
14096499 TCGAAGTGTACAAGATTTTGTGATCATTTG-AAAAAGTGTCCCTATTTAAGACACTTTAATAGCT
387 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATAGCT
* *
14096563 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGTTTTGATG
452 ACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATG
* *
14096628 AGGGATA-GGGGCCAATATAAGGGCCAAGTACTAGCAC-CTATCGCACATCATGTGCGTACACCC
517 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACTC-ATCGCACATCATGTGCGTACACCC
* *
14096691 CCTGGCCCCCCCGATC-TCTGGAACCCCAA-TGCCGCTGGTCATGTTCTCCGACGATGGTACCCC
581 CCTGG-CCCCCCGATCGTC-GGAA-CCCAATTGCCGCCGGTCAGGTTCTCCGACGATGGTACCCC
* *
14096754 CACGAAGAAAAATGCGGCGCCAGCACATGCCGGAGCCCAGCATGTGCTGCCACAACCCTCGGTCC
643 CACGAAGAAAAATGCGGCACCAGCACATGCCGGAGCCCAGCATGTGCTGCCACAACCCTCGATCC
* *
14096819 AGTTTGATCTTAGACTTGGAATGAACTCCGTATGC
1 AGTCTGATCTTAGACTAGGAATGAACTCCGTATGC
14096854 TTAGACTAGG
Statistics
Matches: 667, Mismatches: 65, Indels: 22
0.88 0.09 0.03
Matches are distributed among these distances:
704 1 0.00
705 63 0.09
706 496 0.74
707 51 0.08
710 55 0.08
711 1 0.00
ACGTcount: A:0.26, C:0.22, G:0.24, T:0.28
Consensus pattern (707 bp):
AGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAACGGGTGGG
GTGGGAGGGCGGGCAATACGTCGGCCAGAAACACGGGATGCACAAGCCGTGGATCGATAGGGTGG
TAGGTGGGCTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCCTGTAAATTC
ATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
CAATTTTTAAAACTTTTTATGGTTCTGGATTTTCTAAAATTTTTTCAAAAGGACTTTTGGCCCCA
AACTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCAAAAAACAAAACAGCTAAAAACTCGA
AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATAGCTACTG
GCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATGAGGG
ATAGGGGGCCAATATAAGGGCCAAGTACCACCACTCATCGCACATCATGTGCGTACACCCCCTGG
CCCCCCGATCGTCGGAACCCAATTGCCGCCGGTCAGGTTCTCCGACGATGGTACCCCCACGAAGA
AAAATGCGGCACCAGCACATGCCGGAGCCCAGCATGTGCTGCCACAACCCTCGATCC
Found at i:14096865 original size:26 final size:26
Alignment explanation
Indices: 14096827--14096879 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14096817 CCAGTTTGAT
*
14096827 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14096853 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14096879 C
1 C
14096880 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14097199 original size:184 final size:184
Alignment explanation
Indices: 14096803--14097221 Score: 511
Period size: 184 Copynumber: 2.3 Consensus size: 184
14096793 GCATGTGCTG
** * * *
14096803 CCACAACCCTCGGTCCAGTTTGATCTTAGACTTGGAATGAACTCCGTATGCTTAGACTAGGAATG
1 CCACAACCCTCACTCCGGTATGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
* * * *
14096868 AACTCCGTATGCCTAAGTCAACTCACGAAACGAGCTGCGGGCGCCCAGCCAGCCAGAGGGGCGGG
66 AACTCCATATGCCCAAGTCAACCCACGAAACGAGCTACGGGCGCCCAGCCAGCCAGAGGGGCGGG
*
14096933 ATGCACAAGCTAGGGATCGACCGGGACCCCCTCTGCGTGCTACGGATCCTACTA
131 ATGCACAAGCTAGGGATCGACCGGGACCCCCTCTGCGTGCTACCGATCCTACTA
* * *** * *
14096987 CCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAATG
1 CCACAACCCTCACTCCGGTATGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
* * * *
14097052 AACTCTATATGCCCATGTCAACCCACGAAACGAGCATACGGGCGCTCAGTC-GACCAGAGGGGCG
66 AACTCCATATGCCCAAGTCAACCCACGAAACGAGC-TACGGGCGCCCAGCCAG-CCAGAGGGGCG
* * * * * *
14097116 TGATGCACATG-TCGGGGATCGACCGGGTCCCCTTCTGCGTGCTGCCGATCCTACTA
129 GGATGCACAAGCT-AGGGATCGACCGGGACCCCCTCTGCGTGCTACCGATCCTACTA
** * *
14097172 CCACAA-TTTCCCTCTGGTATGATCTTAGACTGGGAATGAACTCCGTATGC
1 CCACAACCCTCACTCCGGTATGATCTTAGACTGGGAATGAACTCCGTATGC
14097222 CGAAGCCAAT
Statistics
Matches: 198, Mismatches: 34, Indels: 6
0.83 0.14 0.03
Matches are distributed among these distances:
184 123 0.62
185 75 0.38
ACGTcount: A:0.24, C:0.30, G:0.26, T:0.21
Consensus pattern (184 bp):
CCACAACCCTCACTCCGGTATGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
AACTCCATATGCCCAAGTCAACCCACGAAACGAGCTACGGGCGCCCAGCCAGCCAGAGGGGCGGG
ATGCACAAGCTAGGGATCGACCGGGACCCCCTCTGCGTGCTACCGATCCTACTA
Found at i:14097945 original size:26 final size:26
Alignment explanation
Indices: 14097916--14097968 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14097906 CTGGTCCGAT
*
14097916 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
14097942 CTTAGACTGGGAATCAACTTCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
14097968 C
1 C
14097969 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:14098845 original size:26 final size:26
Alignment explanation
Indices: 14098816--14098868 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14098806 CCGATCTAAT
*
14098816 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14098842 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14098868 C
1 C
14098869 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14098922 original size:900 final size:896
Alignment explanation
Indices: 14096987--14103213 Score: 7396
Period size: 900 Copynumber: 7.1 Consensus size: 896
14096977 GATCCTACTA
* * * *
14096987 CCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAATG
1 CCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
** * * * * * * *
14097052 AACTCTATATGCCCATGTCAACCCACGAAACGAGCATACGGGCGCTCAGTCGACCAGAGGGGCGT
66 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA
** * * ** * * * * **
14097117 GATGCACATGTCGGGGATCGACCGGGTCCCCTTCTGCGTGCTGCCGATCCTACTACCACAA-TTT
131 GATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
** * * * ** **
14097181 CCCTCTGGTATGATCTTAGACTGGGAATGAACTCCGTATGCCGAAGCCAATTGACGAAATGAGCA
196 CAGTCAGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAACAGCA
* * * *
14097246 GGCGAGCGGACGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCATGGATCGATAG
261 GGC--G-GG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
** * * * *
14097311 GGTGGTAGGTGGGTTTAGGTGCATCTTCGTATTTCTGCATGCCAATGCCATTTTTACGGCTTATA
322 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTA
* * *
14097376 AATTCATACATTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTTTATT
387 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * * *
14097441 TTGCATGATTCTGGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTGTAAGGAGTTTTGG
452 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGG
* * * *
14097506 CCCCAAACCTGATAGTCGTGATCATTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
517 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
14097571 CTCGAAGTGTACAAGATTTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACACTTTAATGG
582 CTCGAAGTGTACAAGA-TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
14097636 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
646 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* *
14097701 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATTTGCGCACACC
711 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C
** * * * * *
14097766 CCCCTCAGCCCCCTGGATC-ACAGAAACCCCAATGCCGTCGGTCAGGTTCTTCGGCGATGCTCTG
775 CCCC-CAGCCCCCCCGATCGTC-G-AACCCCAATGCTGCCGGTCAGGTTCTCCAG-GAT-CTCTG
* *
14097830 GTGATGGTGCCCTGGCGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAGCATGTGCTG
835 GTGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
* * * * * *
14097892 TCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATC
1 CCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
* * * * * * * *
14097957 AACTTCGTATGCCTAAGTCAACCCATGAAACAAGCATGTGGGCGTTCCGTCGGCCAGAGGGGCGA
66 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA
* * *
14098022 GATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCTTACTGCTGCAACCCT
131 GATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
* * * **
14098087 CAGTCAGGTCTTATCTTAGACTGAGAATGAACTCTGTATGCCTAAGTTAACCGACGAAATGAGCG
196 CAGTCAGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--A-C-
* *
14098152 AGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGTGCAAGCCGTGGATCGATAG
257 AGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* * * * **
14098217 GGTGGTAGGTGGGTTCAGGCACATCTTCATATTTCTACGTCCCAATGACATTTTTATATCTTGTA
322 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTA
* *
14098282 AATTCATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATT
387 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * **
14098347 TTTCATGATTTTCGAAA-TTTTTGCGGTTCGAGATTTGCTAAAATTTTTTTGGAAGGAG-TTTGG
452 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGG
* * *
14098410 CCCTAAACTTGGTAGACGTGATCCTTCTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAA
517 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
14098475 CTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTTCAGACATTTTAATGG
582 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGG
* * *
14098540 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAA-GGGGTGCGAGTTCTAGAGGTTTGA
646 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
*
14098604 TGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACC
711 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * **
14098668 CCCCGGCCCCCCCGATTGCCAGAACCCCAATGCTGCCAATCAGGTTCTCCAGTGATGCTCTGGTG
776 CCCCAGCCCCCCCGATCGTC-GAACCCCAATGCTGCCGGTCAGGTTCTCCAG-GAT-CTCTGGTG
* * *
14098733 ATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
838 ATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
*
14098792 CCGCAACCCTCGGTCCGATCTAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
1 CCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
* *
14098857 AACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAGAGGGGCGA
66 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA
* ** * * **
14098922 GATGCGTAAGCCAGGGATCGACCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTACTACAACCCT
131 GATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
* * * *
14098987 CAGTCCGGTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCA
196 CAGTCAGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--A-C-
* * **
14099052 ACCAGGCAGGCGGGCGGGCACTACATCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
257 AGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* *
14099117 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATCCCAATGACATTTTTATGGCTTGTA
322 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTA
* * *
14099182 AATTCATACAATGG-CTCTTAAGCCTTCGCGTGAAGTTTTATGGCAAGACGACTCGTTTTCTATT
387 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** *
14099246 TTTCACGATTTTGGAAACTTTCAACGGTTC-AGGATTTTTTAAAATTTTTTTGGAAGGCGTTTTG
452 TTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTTGGAAGGAGTTTTG
* * * * *
14099310 GCCCCAAACTTGGTAGACATGATCCTTGGATTTTTGTTGGCATGCATAAAAAAATTCAGCCACAA
516 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
14099375 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTGCAGATACTTTAATGG
581 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
*
14099440 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA---GG-G-G-GTTCTCAAGGTTTGA
646 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * * ** * *
14099499 TGGGGGATGGGGGGCCAATATAAGGGCAAAGTACCAG-TGCCATCACACATCATTTGCGCACACC
711 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
*
14099563 CCTCAGCCCCCCCGATCGTCGAAACCCCAATG-TCGCCGGTCAGGTTCTCC--GA---C----GA
776 CCCCAGCCCCCCCGATCGTCG-AACCCCAATGCT-GCCGGTCAGGTTCTCCAGGATCTCTGGTGA
* * *
14099618 TGGTGCCCAGGCGAAGAAAAAGGCGGCCCCAGCACATGCCCT-AGCCCAGCATGTGCTG
839 TGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATG-CCTGAGCCCAGCATGTGCTG
* * * * * * * * * *
14099676 CCGTAACCCTCGATCCGGTTCGATCATAGACTGAGAATGAACTCTGTTTGCTTAGACTGGGAATG
1 CCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
* ** * * ** *
14099741 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCTAGTGCTCAACTAGCCAGAGGGGCGG
66 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA
** ** * * * * *
14099806 GATGCGTAAGCCAAGGATCGACCGGGTCCCCTTCTGCGTGCTGTCGATGCTACTGTCGCAACCCT
131 GATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
*
14099871 CAGTCCA-GTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AAACGAG
196 CAGT-CAGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAC-AG
* * * * *
14099934 CGGGCGGGCGGACGGGCACAACGCCGGCCATAGAGACGGGATGCGCAAGCCGTGGATCGATAAGG
259 CAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
* * * * * *
14099999 TGGTTGGTGGGTTTAAGCACATATTCATTTTTCTGCATGCCAATGCCATTATTATGGCTTGTAAA
324 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAA
*
14100064 TTCATACAATGGTCCCTTAAGCCTTCGCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
389 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * *
14100129 CCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTGTTAAAATTTTTTTGGAAGGAGTTTTGGCC
454 TCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC
* *
14100194 CCAAACTAGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAGTCAGCTAAAAACT
519 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * *
14100259 CAAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCTCCATTTTCAGACACTTTAATGGCT
584 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCT
* *
14100324 ACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCGAGGTTTGATG
648 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
*
14100389 AGGGATAGGGGGCCAATATAAGGGACAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
713 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
** * * *
14100454 CTGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCAGTCAGGTTCTCCA--A-------TGATGG
778 CCAGCCCCCCCGATCGTC-GAACCCCAATGCTGCCGGTCAGGTTCTCCAGGATCTCTGGTGATGG
** * *
14100510 TGCCCCGATGAAGAACAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCAG
842 TGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
* *
14100565 TCGCAA----C---CC--T-CAA---T---CT-GG--T----T-CG-AT-CTTAGTCTAGGAATG
1 CCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
* * * * * * * *
14100604 AACTCCGTATGCCTAAGTCAACCAATGTAACGAGTGCGCGGGCACTCAGCCAGCCAGTGGGGC-A
66 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA
* * * * * * *
14100668 GGATGCGTAAACCGAGGATCGGTCGGGTCCCCCACTGCGTG-TTCCTGTTCCTGCTTCCACAACC
131 -GATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCC-GATCCTGCTGCCGCAACC
** *
14100732 CTC-GATCTA-GTCCAATCTTTGACTGGGAATG-ACTCCGTATGCCTAAGCCAACCGACG-AAA-
194 CTCAG-TC-AGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAC
* * *
14100792 TG-A-GCGGGCGGGCGGGCACTATGCCGGCCCGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
257 AGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* * *
14100855 GGTGGTTGGTGGGTTTAGGCACATCTTCATTTTTCTGCATGCCAATGCCATTTTTATGGC-TGTT
322 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTG-T
*
14100919 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTAT
386 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
*
14100984 TTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTA
451 TTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTG
* * *
14101049 GCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAA
516 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
*
14101114 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGG
581 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
*
14101179 CTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
646 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
** * * *
14101244 TGAGATATAGGGGGTCAATATAAGGGCCAAGTACCAGCACCCATTGCAAATCATGTGCGCACACC
711 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * *
14101309 CCCGA-CCCCCCCGATCGTCGACACCCTAATGCTG-C---CA-G-T-T--AGGTTCTCCGGTGAT
776 CCCCAGCCCCCCCGATCGTCGA-ACCCCAATGCTGCCGGTCAGGTTCTCCAGGATCTCTGGTGAT
* * * ** * *
14101364 GGTGCCCCGGCAAAGAATAACGCGAAACCAGCACATGCCTGAGCCCACCAAGTGCTG
840 GGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
* * * ** *
14101421 TCGTAACCCTCGATCC-AGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTAGGAAT
1 CCGCAACCCTCGGTCCGA-TCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAAT
* * * *
14101485 GAACTCCGTATGCCTAAGTCAACACACGAAACGAGTGTACGGGCGCTCAGCCGGCCAGAGGGGTG
65 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* * ** * * *
14101550 GGATGCGCAAGCCGATGATCGGTCAGGTCCCCCTTTGCGTGCTGTCGATCCTGCTGCCGCAACCC
130 AGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCC
* * * * *
14101615 T-TGATCCGGTCTGATATTAGACTGGGAATTAACTTCGTATGCCTAAGCCAACCGACG-AAAC-G
195 TCAG-TCAGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAACAG
* * * *
14101677 -A--C---CGGGCAGGCACCACGCCGGCCAGAGAGACGAGATGCGCAAGCCATGGATCGAT-GGG
259 CAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
* *
14101735 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTGGTAAA
324 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAA
** * *
14101800 TTCATACAATGGTCCCTTAAGAATTCACGTGAAGTTTCATGGCAAGACTACTCATTTTCTATTTT
389 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * ** **
14101865 TCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGTG
454 TCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC
* *
14101930 CTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCAAAAAACT
519 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * **
14101995 CAAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGTGTTTCCATTTCAGACACTTTAATGGCTA
584 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
*
14102060 CTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
649 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
14102125 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
714 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * ** * *
14102190 CATCCCCCCCGTTCGTCGAAACCTTAA---TGCC-GTC-GG---T-CAGGCTCTCTGGCGATGGT
779 CAGCCCCCCCGATCGTCG-AACCCCAATGCTGCCGGTCAGGTTCTCCAGGATCTCTGGTGATGGT
* * * *
14102246 GCCCTGACGAAGAAAAATACGGCACCAGCACAT-CCCGAGCCCAGCATGTGCTG
843 GCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
* *
14102299 TCGTAACCCTCGGTCC-AGTCCAATCTTAGACTGGGAATGAA---C---T-C-T-G--T----AT
1 CCGCAACCCTCGGTCCGA-TCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAAT
** *
14102348 G-----C---T---TAAGTCAACCCACGAAACGAGCGTGCGGGTACTCAGCCAGCCAGAGGGGCG
65 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* * * * * * *
14102402 GGATGCGGAAGCCGGGGATCGGTCGGATCCCCCTCTACGTGCT-TCGATCCTGTTGCGGCAACCC
130 AGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCC
* * **
14102466 TCCA-TCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACTAACG-AAACGA
195 T-CAGTCAGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAC-A
* * *
14102529 GCAGACGGAG-GGGCGGGCACCACGACCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
258 GCAGGCGG-GCGGGCGGGCACTACG-CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* * *
14102593 GGGCGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGACTGGT
321 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGT
* ** * * *
14102658 AAATCCATACAATGGTCCCTTAAGAATTCACATGAAGTTTCATGGCAAGGCTACTCGTTTTCTAT
386 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
** * * ***
14102723 TTTTCAAAATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGAGTTTTG
451 TTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTG
* * * *
14102788 GCCCCAAACTTGGTAAACGTGATCCTTGTTTTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAA
516 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * * * *
14102853 ACTCAAAGTGTACAATATTTTGTGACCATTTGAAAAAAGTATCCTCATTTCAGACAGTTTAATGG
581 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * *
14102918 CTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAACGGGGTGTGAGTTCTCGGGGTTTGA
646 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* *
14102983 TGAGGTATAGGGGGCCAGTATAAGGGCCAAGTACCAGCACCCATCGCA-ATCATGTGCG--CA--
711 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * * ** * * **
14103043 --CC--CCCCCTCTATCGCCGGAACCCCAGTGCCACCGGTCAGGTTCTCCGGCGATGCTCCGACG
776 CCCCAGCCCCCCCGATCGTC-GAACCCCAATGCTGCCGGTCAGGTTCTCCAG-GAT-CTCTGGTG
** * ** *
14103104 ATGGTGCCCCGGTAAAGAAAAATACGTTACCAGCACATGCCTGAGCCTAGCATGTGCTG
838 ATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
* * * *
14103163 CCGCAACCCTCGGTCCAATCCGATCTTAGACTGGAAATGAACTCCATATGC
1 CCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGC
14103214 CTAAGCCAAC
Statistics
Matches: 4647, Mismatches: 556, Indels: 272
0.85 0.10 0.05
Matches are distributed among these distances:
847 1 0.00
849 1 0.00
850 1 0.00
851 72 0.02
852 97 0.02
853 2 0.00
854 3 0.00
855 6 0.00
856 84 0.02
857 146 0.03
858 342 0.07
859 13 0.00
860 48 0.01
861 408 0.09
862 35 0.01
863 177 0.04
864 54 0.01
865 3 0.00
866 2 0.00
867 2 0.00
869 2 0.00
870 3 0.00
871 2 0.00
872 4 0.00
873 4 0.00
875 2 0.00
876 3 0.00
877 1 0.00
878 481 0.10
879 113 0.02
880 131 0.03
881 208 0.04
882 198 0.04
883 34 0.01
884 264 0.06
885 5 0.00
886 1 0.00
887 1 0.00
888 51 0.01
889 118 0.03
890 1 0.00
892 2 0.00
894 2 0.00
895 83 0.02
896 27 0.01
897 1 0.00
898 2 0.00
899 62 0.01
900 552 0.12
901 115 0.02
902 50 0.01
903 59 0.01
904 135 0.03
905 197 0.04
906 226 0.05
907 2 0.00
908 1 0.00
910 7 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
CCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATG
AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA
GATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
CAGTCAGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAACAGCA
GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
GTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATT
CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
ACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCC
AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCA
GCCCCCCCGATCGTCGAACCCCAATGCTGCCGGTCAGGTTCTCCAGGATCTCTGGTGATGGTGCC
CCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTG
Found at i:14101474 original size:26 final size:26
Alignment explanation
Indices: 14101445--14101497 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14101435 CCAGTCTGAT
*
14101445 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
*
14101471 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
14101497 C
1 C
14101498 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14103246 original size:4 final size:4
Alignment explanation
Indices: 14103237--14103273 Score: 74
Period size: 4 Copynumber: 9.2 Consensus size: 4
14103227 CGAAACGAGT
14103237 GGGC GGGC GGGC GGGC GGGC GGGC GGGC GGGC GGGC G
1 GGGC GGGC GGGC GGGC GGGC GGGC GGGC GGGC GGGC G
14103274 AGCACTATGC
Statistics
Matches: 33, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 33 1.00
ACGTcount: A:0.00, C:0.24, G:0.76, T:0.00
Consensus pattern (4 bp):
GGGC
Found at i:14103954 original size:26 final size:26
Alignment explanation
Indices: 14103925--14103977 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14103915 TTGGTCCGAT
*
14103925 CTTACACTGGGAATGAATTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
14103951 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
14103977 C
1 C
14103978 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:14104861 original size:27 final size:27
Alignment explanation
Indices: 14104822--14104873 Score: 68
Period size: 27 Copynumber: 1.9 Consensus size: 27
14104812 TTGGTTCAAT
14104822 CTTACACTAGGAATAAACTACGTATTG
1 CTTACACTAGGAATAAACTACGTATTG
* * * *
14104849 CTTAGACTTGGAATGAACTCCGTAT
1 CTTACACTAGGAATAAACTACGTAT
14104874 GCCTAAGTCA
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
27 21 1.00
ACGTcount: A:0.33, C:0.19, G:0.17, T:0.31
Consensus pattern (27 bp):
CTTACACTAGGAATAAACTACGTATTG
Found at i:14105213 original size:887 final size:893
Alignment explanation
Indices: 14103290--14105693 Score: 3459
Period size: 887 Copynumber: 2.7 Consensus size: 893
14103280 ATGCCAGCCT
* * * *
14103290 AAGAGACAGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTGTAGGTACATCTTCATAT
1 AAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* *
14103355 TTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGT
66 TTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * ** * *
14103420 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA
131 GAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGG
* *
14103485 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGAATTT
196 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
14103550 TTTTTGGCATGCATAAAAAAATTCA-CTAAAAACTCGTAGTGTACAAGATTTTGTGACCATTTGA
261 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
14103614 AAAAAGTGTCCCCATTTCAGACACCTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGC
326 AAAAAGTGTCCCCATTTTAGACACCTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
14103679 TCTTTGAGGGGGTGTGAGTTCTTGAGGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
391 TCTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * **
14103744 CCAGCACCCATCGCACATCTTGTGCGTACACCCCCCCGGCCCCCCCGATCGCAAGAACCCCAATG
456 CCAGCACCCATCGCACATCATGTGCGAACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATG
* *
14103809 CCGTCGGTCAGGTTCTCCGACGATGCTCTGGCTATGGTGCCCCGACGAAGAAAAATACGGCACCA
520 CCGTCGGTCAGGTTCTCCGACGATGCTCCGGCTATGGTGCCCCGACGAAGAAAAATGCGGCACCA
** * * * * *
14103874 GCACATGTTCGAGCCTAGCATGTGCTGTCGAAACCCTCGGTTTGGTCCGATCTTACACTGGGAAT
585 GCACATGCCCAAGCCTAGCATGTGCTGCCGCAACCCTCGGTTTGGTCCAATCTTACACTAGGAAT
* * *
14103939 GAATTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAATCGAACGTA
650 AAACTACGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAT---ACGTA
* * * * *
14104004 CGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCACAAGCTGGGGATCTATCGGGTCCCCCTCTGTG
712 --GGCGC-TAGCCGGCAAAAGGGGCGGGATGCACAAGCTGAGGATCGATCGGGTCCCCCTCCGTG
* * * * * *
14104069 TGCTGTCGATCCTACTGCTGCAACTCTCCATCCGGTCTGATCTTAGATTGGGAATGAACTCCGTA
774 TACTGTAGATCCTACTGCTACAACCCTCCATCCGGTCTGATCTTAGACTGGAAATGAACTCCGTA
* * * * * * *
14104134 TGCCTAAGCCAACTGACGAAACAAGCGGGCGGGCGGGCGGGCACCAAGCCGGCCA
839 TGCCTAAGCCAACCGACGAAACAAGCAGACGAGCAGGCCGGCACCAAGCCGACCA
*
14104189 AAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTAT
1 AAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* * *
14104254 TTCTATGTGCCAATGTCATTTTTATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCACGT
66 TTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
*
14104319 GAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGG
131 GAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGG
*
14104384 GATTTTTTAAAATTTTTTCGGTAA-GAGTTTTGGCCCCTAACTTGGTAGACGTGATCCTTGTATT
196 GATTTTTTAAAATTTTTTCGG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* *
14104448 TTTGTTGGCATTCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
14104513 AAAAAAGTGTCCCCATTTTAGACACCTTAATGGCTAATGGCAGC-AACCTTTAAAATCTCAAATG
325 AAAAAAGTGTCCCCATTTTAGACACCTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
14104577 CTCTTTGAGGGGGGGTGGGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
390 CTCTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
14104642 ACCAG-AGCCCATCGCACATCATGTGCGAACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAAT
455 ACCAGCA-CCCATCGCACATCATGTGCGAACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAAT
* * * * *
14104705 GCCGTCGATCAGGTTCTCTGGCAATGCTCCGGCTATGGTGCCCCAACGAAGAAAAATGCGGCACC
519 GCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCTATGGTGCCCCGACGAAGAAAAATGCGGCACC
* *
14104770 AGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTTTGGTTCAATCTTACACTAGGAA
584 AGCACATGCCCAAGCCTAGCATGTGCTGCCGCAACCCTCGGTTTGGTCCAATCTTACACTAGGAA
*
14104835 TAAACTACGTATTGCTTAGACTTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAT-CG-A-
649 TAAACTACGTA-TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAATACGTAG
* * *
14104897 GCG-T-GCGGGCAAAAGGGGCGGGATGCGCAAG-TCGAGGATCGGTCGGGTCCCCCTCCGTGTAC
713 GCGCTAGCCGGCAAAAGGGGCGGGATGCACAAGCT-GAGGATCGATCGGGTCCCCCTCCGTGTAC
* ** *
14104959 TGTAGATCCT-GTTTTCACAACCCTCCATCCGAT-TCGATCTTAGACTGGAAATGAACTCCGTAT
777 TGTAGATCCTACTGCT-ACAACCCTCCATCCGGTCT-GATCTTAGACTGGAAATGAACTCCGTAT
* * *
14105022 GCCTAAGCCATCCGACGAAACGAGCAGACGAGCAGGCCGGCACCACGCCGACCA
840 GCCTAAGCCAACCGACGAAACAAGCAGACGAGCAGGCCGGCACCAAGCCGACCA
* *
14105076 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATAT
1 AAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* *
14105141 TTCTGCGTGCCAATGCCATTTTTATGGCTGGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
66 TTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* *
14105206 GAAGTTTCATGGCAAGACT-ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA-TGATTT
131 GAAGTTTCATGGCAAGA-TGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACAG-TTC
* *
14105269 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAAACTTGGAAGACGTGATCCTTGTAT
194 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
14105334 TTTTGGTGGCGTGCACAAAAAACATT-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
259 TTTTGTTGGCATGCACAAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* *
14105398 TGAGAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
323 TGAAAAAAGTGTCCCCATTTTAGACACCTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* * * * * *
14105463 TGCTCTTTAACGGGGTGTGAGTTTTCAAGGTTTGCTGAGGGATAGGAGGCC-A-AT-A----CAA
388 TGCTCTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * * * * *
14105521 GTACCAGCACCCATTGGACATCATGTGTGCACACCCCCAGGCCCCCCCGATCACCGGAACCCCAA
453 GTACCAGCACCCATCGCACATCATGTGCGAACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAA
* * * * *
14105586 CGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGGCAC
518 TGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCTATGGTGCCCCGACGAAGAAAAATGCGGCAC
* *
14105651 CAGCACATGCCCAAGCCTAGCATGTGCTACCGCAACCATCGGT
583 CAGCACATGCCCAAGCCTAGCATGTGCTGCCGCAACCCTCGGT
14105694 CTAATCTGAT
Statistics
Matches: 1357, Mismatches: 134, Indels: 45
0.88 0.09 0.03
Matches are distributed among these distances:
881 37 0.03
882 118 0.09
885 1 0.00
886 9 0.01
887 477 0.35
888 65 0.05
890 3 0.00
893 1 0.00
894 2 0.00
897 144 0.11
898 55 0.04
899 365 0.27
900 80 0.06
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.27
Consensus pattern (893 bp):
AAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
TTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
GAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGG
GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTGTCCCCATTTTAGACACCTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
CCAGCACCCATCGCACATCATGTGCGAACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGC
CGTCGGTCAGGTTCTCCGACGATGCTCCGGCTATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
CACATGCCCAAGCCTAGCATGTGCTGCCGCAACCCTCGGTTTGGTCCAATCTTACACTAGGAATA
AACTACGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAATACGTAGGCG
CTAGCCGGCAAAAGGGGCGGGATGCACAAGCTGAGGATCGATCGGGTCCCCCTCCGTGTACTGTA
GATCCTACTGCTACAACCCTCCATCCGGTCTGATCTTAGACTGGAAATGAACTCCGTATGCCTAA
GCCAACCGACGAAACAAGCAGACGAGCAGGCCGGCACCAAGCCGACCA
Found at i:14106464 original size:26 final size:26
Alignment explanation
Indices: 14106413--14106465 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14106403 CCGATCCGAT
*
14106413 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
14106439 CTTAGACTGGGACTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14106465 C
1 C
14106466 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14107346 original size:26 final size:26
Alignment explanation
Indices: 14107317--14107395 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
14107307 CTGATCCGAT
14107317 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14107343 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14107369 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14107395 C
1 C
14107396 CCAAGTCAAC
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14110894 original size:26 final size:26
Alignment explanation
Indices: 14110855--14110907 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14110845 CTAGTCCAAT
*
14110855 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14110881 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14110907 C
1 C
14110908 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14111584 original size:895 final size:891
Alignment explanation
Indices: 14108167--14112796 Score: 5228
Period size: 905 Copynumber: 5.3 Consensus size: 891
14108157 TCGACGATGG
* *
14108167 TGCCCGAGCCCAGCATGTGCTGTCGTAA-CCTCGGTTCTGTCCGATCTTAGACTGGGAATGAACT
1 TGCCTGAGCCCAGCATGTGCTGTCGTAACCCTCGG-TCTGTCTGATCTTAGACTGGGAATGAACT
* * * *
14108231 CCATATGCTTAGACTGGCAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGC
65 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGC
* * * *** *
14108296 GCTCAGTCGGCCAGTGGGGCGGGATGCGCAAGTTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTA
130 GCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGT-CCCCTCTGCGTGCTG
* * * ** * * * *
14108361 TCAATCTTGCTATCACAACTCTCGGTCCGGTCCGATATTAGACTGGTAATGAACTCCGTATGCCT
194 CCAATCCTACTGCCACAACCCTCGGTTCGGTCTGATATTAGACTGGGAATGAACTCCGTATGCCT
* * * * * ** *
14108426 AAGCCAACCGACAAAATGAGC--G-GGCGAGCAGTACATCGGCCAGAGAGGTGGGATGCGCAAGT
259 AAGCCAACCGACGAAACGAGCGGGCGGCGGGCACTAC-GCGGCCAGAGAGACGGGATGCGCAAGC
* *
14108488 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
323 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
14108553 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCA
388 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
14108618 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTTG
453 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTT-AAATTTTTTTG
* *
14108683 AAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
517 GAAGGAGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
14108748 ATTCAGCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAG
582 ATTCAGATAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
14108813 ACACTTTATTTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
647 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
14108878 CTCGAGGTTTGATGCA-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
712 CTCGAGGTTTGATG-AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
14108942 ATGTGCGCGCACACCCCCCGGCCCCCCCAATCGCCGGATCCTCAATACCGTCGGTCAGGTTCTTC
776 ATGTGCGCACAC-CCCCCCGACCCCCCCAATCGCCGAAACCCCAATACCGTCGGTCAGGTTCTCC
* * *** *
14109007 GACGATGCCCCTG-CGATGGTGCCCCGATGAAGAAAAATGTTACACCAACACA
840 GGCGATGCTCC-GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACA
* ** * *
14109059 TGCCCGAGCCCAGCATGTGCTACCGCAACCCCCGGTCTGGT-TGATCTTAGA--GGGAATG-ACT
1 TGCCTGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCT-GTCTGATCTTAGACTGGGAATGAACT
* * *
14109120 CCAGTATGCTTAGAAC-GGG-ATGAACT-CG-AAGCCT-AGTCAACGTCACGAAAC-AGCGTTGC
65 CC-GTATGCTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCAAC-CCACGAAACGAGCG-TAC
* * * * **
14109179 GAGC-CT-AGCTTCGG-C-GATGGGTGGGAT------GCC-GGTAT---TC-GG-CCAGTC--C-
126 GGGCGCTCAGC--CGGCCAGAGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGTCCCCTCTGCG
* * * * *
14109225 T-CAAG-CAAT-CTGC-GCGAGCAA-CCT-GGTTC-GTC-CA-ATTAGACT--G-ATGAACTCTG
189 TGC-TGCCAATCCTACTGCCA-CAACCCTCGGTTCGGTCTGATATTAGACTGGGAATGAACTCCG
** * * *
14109278 T-T--CTGAAG-CAACTAATGAAATGA-CGAGCGCGGCAGGCA-TACGC-GCCAGAGAGAC--GA
252 TATGCCT-AAGCCAACCGACGAAACGAGCG-G-GCGGCGGGCACTACGCGGCCAGAGAGACGGGA
* * *
14109334 TGTGCAAGCCGTGGATCCGATAGAGTGGTTAGGTGGG-TTAGGCACAGCTTCATATTTCTGC-TG
314 TGCGCAAGCCGTGGAT-CGATAGGGTGG-TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* *
14109397 CCAATG-TATTTTTGTGGCTTGTAAA-TCATA-AAT--TCCC--AAG--TTCACGTGAAGTTTCA
377 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* *
14109453 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGTTTTTTTA
442 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTT-
*
14109518 AAATTTTTTCGGAAGGAGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
506 AAATTTTTTTGGAAGGAGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
14109583 TGCACAAAAAAATT-AAACTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAATG
571 TGCACAAAAAAATTCAGA-TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
*
14109647 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCGAACCTGTAAAATCTCAAATGCTCTTTAAG
635 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* *
14109712 GGGGTGTGAGTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACC
700 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * * * * *
14109777 CATCGCACATCATGTGCGCACACCCCCCAGGCCCCCTCTATCGCTGGAACCCCAATGCCG-CTGA
765 CATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCAATCGCCGAAACCCCAATACCGTC-GG
* * *
14109841 TCAGGTTCTCCGCCGATGCTCCTACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGTACA
829 TCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACA
** * * * *
14109904 TG-CTCGAGCCCAGTTTGTGCTGTTGCAACCCTCGATCTGATCTGATCTTGGACTGGGAATGAAC
1 TGCCT-GAGCCCAGCATGTGCTGTCGTAACCCTCGGTCTG-TCTGATCTTAGACTGGGAATGAAC
* * * *
14109968 TCAGTATGCTTAGACTAGGG-ATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGA
64 TCCGTATGCTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGG
* * * * *
14110032 GCGCTCAGCTGGCCAGAGGGGCGGGATGCACAAGTCGGGGATCGGTTGGGTCCTCCTCTGCATGC
128 GCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGTCC-CCTCTGCGTGC
* * * * ** * * *
14110097 TATCATAACCCCACTGCTGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACT-CATAT
192 T-GC-CAATCCTACTGCCACAACCCTCGGTTCGGTCTGATATTAGACTGGGAATGAACTCCGTAT
*
14110161 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGACGGGCGAGCACTACGCTGGCCAAAGAGAC
255 GCCTAAGCCAACCGACGAAACGA----GCGGGCGG-C--G-G-GCACTACGC-GGCCAGAGAGAC
* * *
14110226 GGCATTCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
310 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* * **
14110291 TGCCAATGCCATTTTTATGGCTTGTCAATTCATGCAATCATCCCTTAAGCCTTCACGTGAAGTTT
375 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * *
14110356 CATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTGCTGTTCGGGTTTTTT
440 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGG-ATTTT
* * *
14110421 TTAAATTTTTTTCGAAGGAGTTTTGGCAACAAACTTGGTAGACCTGATCCTTGTATTTTTGTTGG
504 TTAAATTTTTTTGGAAGGAGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * * *
14110486 TAGGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAGAAGATTTTGTGACCATTTGAAAAAAGT
569 CATGCACAAAAAAATTCAGATAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * * *
14110551 GTCCCCATTTCAGACACTTTAATGGCGACTGGCAGCAAACTTGTAAAATATCAAATGCTTTTTAA
634 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
14110616 GGGGGGGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
699 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * *
14110681 CTATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCGATCGCCAAAACCCCAATGCCGTCGG
764 CCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCAATCGCCGAAACCCCAATACCGTCGG
* * *
14110746 TCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATACGGCACCAGCACA
829 TCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACA
* ** *
14110809 TGCCTGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTAGTCCAATCTTAGACTGTGAATGAACT
1 TGCCTGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCT-GTCTGATCTTAGACTGGGAATGAACT
14110874 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGC
65 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGC
* *
14110939 ACTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCAGGGATTGGTCGGGTACCCCTCTGCGTGCTG
130 GCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGT-CCCCTCTGCGTGCTG
* * * *
14111004 CCAATCCTACTACCACAACCCTCGG-TCTGATCTGATCTTAGACTGGGAATGAACTCCGTACGCC
194 CCAATCCTACTGCCACAACCCTCGGTTC-GGTCTGATATTAGACTGGGAATGAACTCCGTATGCC
* * * *
14111068 TAAGCCAACCGACGAAACAAGCGGGCTGGCGGGCACTATGTCGGCCAGGGAGACGGGATGCGTAA
258 TAAGCCAACCGACGAAACGAGCGGGC-GGCGGGCACTACG-CGGCCAGAGAGACGGGATGCGCAA
**
14111133 GCCGTAAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
321 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14111198 TTTTTAT-GCATTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGA
386 TTTTTATGGC-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * ** * *
14111262 CGACTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCAGTTCGGGATTTTTTAAACTTTTT
450 CGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTTAAATTTTTT
* * * *
14111327 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGCTAGCATGCACAAAA
515 TGGAAGGAGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
14111392 AAATTCAGATAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTT
580 AAATTCAGATAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14111457 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAG
645 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
14111522 TTCACGAGATTTGATGAGGGATAAGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACAT
710 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
14111587 CATGTGCGCACACCCCTCC-AGCCCCCTCAATCGTCGAAACCCTAATACCGCCAGTCAGGTTCTC
775 CATGTGCGCACACCCCCCCGA-CCCCCCCAATCGCCGAAACCCCAATACCGTCGGTCAGGTTCTC
* * * * * *
14111651 TGGTGATGCTCCGATGATAGTGCCCC-AGCGAAGAAAAATGTC-GCACCAGAACA
839 CGGCGATGCTCCGACGATGGTGCCCCGA-TGAAGAAAAATG-CGGCACCAGCACA
* * * * *
14111704 TGCCTGAGCCCAGCATCTGCTGTCGTAACCCTCGATCCGGTCTGATCTTAGATTGGGAATGAAGT
1 TGCCTGAGCCCAGCATGTGCTGTCGTAACCCTCGGT-CTGTCTGATCTTAGACTGGGAATGAACT
* *
14111769 TCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGC
65 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGC
* * * * *
14111834 GCTCAACCGACCAGAGGGGCGGGATG-AGCAAGCCAGGGATCGGTCAGGTCCCCTATACGTGCTG
130 GCTCAGCCGGCCAGAGGGGCGGGATGCA-CAAGCCAGGGATCGGTCGGGTCCCCTCTGCGTGCTG
* * * **
14111898 TCGATCCTACTGCCGCAA--C-C----C--TC--A-A-CCGA---GG-A--AA-T--G-A-G--T
194 CCAATCCTACTGCCACAACCCTCGGTTCGGTCTGATATTAGACTGGGAATGAACTCCGTATGCCT
* * * *
14111937 --G------G--G---CG-G-GTG-GGCGGGCACTACGCCGGTCAGAGACACGAGATGCGCAAGC
259 AAGCCAACCGACGAAACGAGCGGGCGGCGGGCACTACG-CGGCCAGAGAGACGGGATGCGCAAGC
* * *
14111986 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTTTGCATGCCAATGCCATT
323 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
14112051 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
388 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* ** *
14112116 CTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTATGGTTCGAGATTTTTTAAATTTTTTTCG
453 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTTAAATTTTTTT-G
* * * * *
14112181 GAAGGCGTTTT-GCCTCCAAACTTGGTGGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAA
517 GAAGGAGTTTTGGCC-ACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * *
14112245 GATTCAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCA
581 AATTCAGATAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
14112310 GACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGT
646 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
14112375 TCTCGAGGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATG
711 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * ** * * * **
14112440 ATTTGCGCACA-CCCCTCG-GCCCCCCGATCATCAAAACCCTAATGCTATCGGTCAGGTTCT-C-
776 ATGTGCGCACACCCCCCCGACCCCCCCAATCGCCGAAACCCCAATACCGTCGGTCAGGTTCTCCG
* * *
14112501 -C-A-G-T-----GATGGTACCCCGGTGAAGAAAAATGCAGCACCAGCACA
841 GCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACA
* ** * * *
14112543 TGCCCGAGCCCAGCATGTGCTGTCACAACCCTCGGTCCGATCAGATCTTGGACTGGGAATGAAC-
1 TGCCTGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCTG-TCTGATCTTAGACTGGGAATGAACT
* *
14112607 CCAGTAAGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
65 CC-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
** * * * * * * *
14112672 CGCTCAGCTAGACAGAGGGGCAGGATGCACAAGCCGGGGATCAGTTGGGTCCCCTTCTACATGCT
129 CGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGTCCCC-TCTGCGTGCT
* ** * * *
14112737 GCCAATCCTACTGTCGTAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
193 GCCAATCCTACTGCCACAACCCTCGGTTCGGTCTGATATTAGACTGGGAATGAACTCCGT
14112797 CTGTGAAAGC
Statistics
Matches: 3195, Mismatches: 395, Indels: 325
0.82 0.10 0.08
Matches are distributed among these distances:
838 4 0.00
839 182 0.06
840 24 0.01
842 1 0.00
843 1 0.00
844 4 0.00
845 116 0.04
846 348 0.11
847 3 0.00
848 20 0.01
849 16 0.01
850 38 0.01
851 236 0.07
852 262 0.08
853 22 0.01
854 18 0.01
855 26 0.01
856 47 0.01
857 21 0.01
858 3 0.00
859 18 0.01
860 12 0.00
862 9 0.00
863 2 0.00
864 5 0.00
865 6 0.00
866 6 0.00
867 6 0.00
868 7 0.00
869 2 0.00
870 3 0.00
871 1 0.00
872 7 0.00
873 5 0.00
874 8 0.00
875 8 0.00
876 3 0.00
877 2 0.00
878 13 0.00
879 1 0.00
880 2 0.00
881 10 0.00
882 3 0.00
883 14 0.00
885 13 0.00
886 18 0.01
887 22 0.01
888 4 0.00
889 12 0.00
890 19 0.01
891 6 0.00
892 43 0.01
893 7 0.00
894 47 0.01
895 539 0.17
896 212 0.07
897 18 0.01
898 5 0.00
899 3 0.00
900 7 0.00
901 6 0.00
902 2 0.00
903 46 0.01
904 29 0.01
905 578 0.18
906 14 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
TGCCTGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCTGTCTGATCTTAGACTGGGAATGAACTC
CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCG
CTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGTCCCCTCTGCGTGCTGCC
AATCCTACTGCCACAACCCTCGGTTCGGTCTGATATTAGACTGGGAATGAACTCCGTATGCCTAA
GCCAACCGACGAAACGAGCGGGCGGCGGGCACTACGCGGCCAGAGAGACGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTTAAATTTTTTTGGAAG
GAGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
AGATAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
CGCACACCCCCCCGACCCCCCCAATCGCCGAAACCCCAATACCGTCGGTCAGGTTCTCCGGCGAT
GCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACA
Found at i:14111786 original size:26 final size:26
Alignment explanation
Indices: 14111750--14111802 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14111740 CCGGTCTGAT
* * *
14111750 CTTAGATTGGGAATGAAGTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14111776 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14111802 C
1 C
14111803 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.15, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14115232 original size:26 final size:25
Alignment explanation
Indices: 14115191--14115242 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
14115181 CCGGTCCGAT
*
14115191 CTTAGACTGGAATGAACTCTGTATG
1 CTTAGACTGGAATGAACTCCGTATG
14115216 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACT-GGAATGAACTCCGTATG
14115242 C
1 C
14115243 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29
Consensus pattern (25 bp):
CTTAGACTGGAATGAACTCCGTATG
Found at i:14115595 original size:898 final size:882
Alignment explanation
Indices: 14112803--14115524 Score: 3302
Period size: 871 Copynumber: 3.1 Consensus size: 882
14112793 CCGTCTGTGA
* * **
14112803 AAGCCGTGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTTATATTTTTGGGTGCCAATGC
1 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA-GCACATCTTCATA--TTTGCATGCCAATGC
* * * * * *
14112868 CACTTTTATGGCTTGTAAATTAATAAAATGGTCCCTTAAGCATTCACATGAAGTTTCATGGCAAG
63 CATTTTTAT-GCTTGTAAATTCATACAACGGT-CC-TAAGC-TTCAC-GGAAGTTTAATGGCAAG
* *
14112933 ACCACTCGTTTTCTATTTTTCATC-ATTTTTGAAACTTTTTTCGGTTCGGGATTTTTTAAAATTT
123 ACGACTCGTTTTCTATTTTTCA-CGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTT
* * *
14112997 TTTCAGAAGGATTTTTGGCCCCAAACTTGGTACACGTGATCCTTGTATTTTTGTTGGCATGTACA
186 TTTCAGAAGGATTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
14113062 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAACCATTTG-AAAAAGTGT-CCCA
251 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG-ACCATTTGAAAAAAGTGTCCCCA
*
14113125 TTTCAGACACTTTAATGGCTACT-GCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
315 TTTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTG
* * * * *
14113189 TGAGTTCTGAGGGTTTGATTAGGGATAGGTGGCGAGTATAAGGGCCAAGTACCAGCACCCATCGC
380 TGAGTTCTGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCAC
** *
14113254 ACATCATGTGCGCACACCCCCCATCCCCCTCGATCGTCGGAACCCCAATGCCATCGATCAGGTTC
444 ACATCATGTGCGCACACCCCCCGCCCCCCTCGATCGTCGGAA-CCCAATGCCACCGATCAGGTTC
* * * * *
14113319 TCCGGTAATACTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCATATGCCTGAGCC
508 TCCGGTGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
14113384 CAGCATGTGCTGCCACAA-CC-C--T-C-G--G-TC----C--G---G--TCTG-AT-CTTAGAC
573 CAGCATGTGCTGCCACAACCCTCGGTCCGGTCGATCTTGACTGGAATGAATCTGTATGCTTAGAC
* * * *
14113427 TAGGAATGAACCCCGTATGCCTAAGTCTACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAG
638 TAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGGCCAG
* * * * *
14113492 AGGGGCGGGATGCGCATGCCGAGGATCGGTCAGGTCCACCTCTGCGTGCTGCCGATCCTGCAGCC
703 AGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCC-CTTCTGCGTGCTGTCGATCCTGCTGCC
* * *
14113557 GTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCCAATCGATGA
767 GTAACCCTC-GTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
14113622 AACGT-GCGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
831 AAAGTGGCGGACGGGCGGGCGGGCACTAC-CTGGCCAGAAAGACGGGATGCGC
* *
14113674 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCACATTTTTGCATGCCAGTGC
1 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG-CACATCTT--CATATTTGCATGCCAATGC
*
14113739 CATTTTTATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCACGGGAAGTTTCATGGCAAG
63 CATTTTTAT-GCTTGTAAATTCATACAACGGT-CC-TAAG-CTTCAC-GGAAGTTTAATGGCAAG
** *
14113804 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACTGTTCGAGATTTTTTAAAATTTT
123 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAAATTTT
* * * *
14113869 TTCGGAAGGATTTTTGGCCGCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAA
187 TTCAGAAGGATTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
14113934 AAAAATTTACCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGGTGTCCCCAT
252 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-GTGTCCCCAT
14113999 TTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGT
316 TTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGT
*
14114063 GAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACA
381 GAGTTC-TGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACA
* * * * * *
14114128 CCTCATGTGTGCACACCCCCCCGACCCCCCCCGATCGTCGAAACCCTAATGCCACCAATCAGATT
445 CATCATGTGCGCACA-CCCCCCG-CCCCCCTCGATCGTCGGAACCC-AATGCCACCGATCAGGTT
* * * * *
14114193 CTCCGGTGATGCTTTGACGATGGTGCCCCGACGAAGAAAAATGTGGTACTAGCACATCCCCGAGC
507 CTCCGGTGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
** * *
14114258 CCAGCATGTGCTGCCGTAACCCTCGGTCCGATCAGATCTTGGACTGGGAATGAATCTAGTAAGCT
572 CCAGCATGTGCTGCCACAACCCTCGGTCCGGTC-GATCTT-GACT-GGAATGAATCT-GTATGCT
* *
14114323 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTA
633 TAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
* * * * * ** * *
14114388 GACAGAGGGGCGGGAT-CACAAGCCGGGGATCAGTCGAGTCCCCTTCTATGTGCTGTCAATCCTA
698 GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGT-CCCTTCTGCGTGCTGTCGATCCTG
* * * * * *
14114452 CTGTCATAACCCTCGATCCGGTCTGATCTTATACT-GGAATGAACTCCGTATGCCTAAGCCAACT
762 CTGCCGTAACCCTCG-TCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* *
14114516 GAC-AAAA-TGAGCGGACGGGCGGGCGGGCACTACGTCGACCA-AAGAGACGGGATGCGC
826 GACGAAAAGTG-GCGGACGGGCGGGCGGGCACTACCT-GGCCAGAA-AGACGGGATGCGC
* * *
14114573 AAGCCGTGAATCGATAGGGTGGTAGGTGTGTTTGGGCACATCTTCATATTTTTGCATGCCAATGC
1 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT-AGCACATCTTCATA--TTTGCATGCCAATGC
*
14114638 CATTTTTATGGCTTGTAAATTCATACAACGGTCCCTTAGGCCTTCACGTGAAGTTTAATGGCAAG
63 CATTTTTAT-GCTTGTAAATTCATACAACGGT-CC-TAAG-CTTCACG-GAAGTTTAATGGCAAG
*
14114703 ACGACTCGTTTTCTA-TTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTAAAAATTTT
123 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTT
* * ** * *
14114767 TTCAGATGG-TGTTTTGGCCAAAAACTTGGTAGACAAGATCCTTGTATTTTTGTTGTCATGCGCA
187 TTCAGAAGGAT-TTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * * *
14114831 AAAACATTCAGCTAAAAATTCGAAGTGTACAGGATTTTGCGACCATTTGAAAAAAGTGTCCCCAA
251 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
14114896 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGT
316 TTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGT
*
14114961 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCACA
381 GAGTTCT-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACA
* * *
14115026 CATCATGTGCGAACACCCCCCGGCCCCCTCGATCG-CTGGAACCTCAATGCCGCCGATCAGGTTC
445 CATCATGTGCGCACACCCCCCGCCCCCCTCGATCGTC-GGAACC-CAATGCCACCGATCAGGTTC
** ** ** * * * * *
14115090 TCCGACGATGCTCTGGTGATAATGCCCTGGCAAAGAAAAATGCAGCACCAGCACATGCCCGAACC
508 TCCGGTGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
14115155 CAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGAATGAACTCTGTATGCTTA
573 CAGCATGTGCTGCCACAACCCTCGGTCCGGT-CGATCTT-GACTGGAATGAA-TCTGTATGCTTA
* * * *
14115220 GACTAGGAATGAACTCCGTATGCCTAAGTCAACACATGAAATGAGTGTGCGGGCGCTCAGCTGGC
635 GACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGGC
* * * * * *
14115285 CAGAGGGGCGGGATGTGCAAGCCGAGAATCGGCCGGGTCCCTTTTTGCGTGCTATCGATTCTGCT
700 CAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCC-TTCTGCGTGCTGTCGATCCTGCT
* ** * *
14115350 GCCGCAACCCTCAGTCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTATGCCACCCGA
764 GCCGTAACCCTC-GTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * ** *
14115415 CGAAATGAGTGGGCGGATGGGCGGGTGTGCAGGCAATACACTGGCCAGAAAGTTGGGATGCGT
828 CGAAA--AGT-GGCGGACGGGC--G-G-GCGGGCACTAC-CTGGCCAGAAAGACGGGATGCGC
14115478 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCACATCTTCATA
1 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCACATCTTCATA
14115525 ATGGCTACTG
Statistics
Matches: 1584, Mismatches: 194, Indels: 113
0.84 0.10 0.06
Matches are distributed among these distances:
870 11 0.01
871 268 0.17
872 5 0.00
873 105 0.07
874 44 0.03
875 103 0.07
876 2 0.00
877 1 0.00
879 1 0.00
880 1 0.00
884 1 0.00
885 2 0.00
890 1 0.00
893 1 0.00
895 92 0.06
896 178 0.11
897 108 0.07
898 237 0.15
899 199 0.13
900 63 0.04
901 88 0.06
902 1 0.00
903 1 0.00
904 14 0.01
905 54 0.03
906 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (882 bp):
AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCACATCTTCATATTTGCATGCCAATGCCAT
TTTTATGCTTGTAAATTCATACAACGGTCCTAAGCTTCACGGAAGTTTAATGGCAAGACGACTCG
TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGATTTTTTAAAATTTTTTCAGAAGG
ATTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCG
CACACCCCCCGCCCCCCTCGATCGTCGGAACCCAATGCCACCGATCAGGTTCTCCGGTGATGCTC
TGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
CACAACCCTCGGTCCGGTCGATCTTGACTGGAATGAATCTGTATGCTTAGACTAGGAATGAACTC
CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGC
GCAAGCCGAGGATCGGTCGGGTCCCTTCTGCGTGCTGTCGATCCTGCTGCCGTAACCCTCGTCTG
ATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGTGGCGGACGGG
CGGGCGGGCACTACCTGGCCAGAAAGACGGGATGCGC
Found at i:14115843 original size:26 final size:26
Alignment explanation
Indices: 14115807--14115859 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14115797 CCAATCTGAT
14115807 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
* *
14115833 CTTAGACTGGGGATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
14115859 C
1 C
14115860 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCAGTATG
Found at i:14116115 original size:617 final size:616
Alignment explanation
Indices: 14114907--14116127 Score: 1612
Period size: 617 Copynumber: 2.0 Consensus size: 616
14114897 TCAGACACTT
** *
14114907 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAG
1 TAATGGCTACTGGCAAAAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAG
* * *
14114972 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCACACATCATGTGCG
66 GTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCACACATCATGTGCG
* * * * *
14115037 AACACCCCCCGGCCCCCTCGATCGCTGGAACCTCAATGCCGCCGATCAGGTTCTCCGACGATGCT
131 AACACCCCCCGGCCCCCCCAATCACCGGAACCTCAATGCCACCGATCAGGTTCTCCGACGATGCT
* * *
14115102 CTGGTGATAATGCCCTGGCAAAGAAAAATGCAGCACCAGCACATGCCCGAACCCAGCATGTGCTG
196 CTAGTGATAATGCCCCGGCAAAGAAAAATGCAGCACCAACACATGCCCGAACCCAGCATGTGCTG
* ** *
14115167 CCACAACCCTCGGTCCGGTCCGATCTTAGACTGGAATGAACTCTGTATGCTTAGACTAGGAATGA
261 ACACAACCCTCGGTCCAATCCGATCTTAGACTGGAATGAACTCAGTATGCTTAGACTAGGAATGA
** * * *
14115232 ACTCCGTATGCCTAAGTCAACACATGAAATGAGTGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGG
326 ACTCCGTATGCCTAAGTCAACACACCAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGGCGGG
** * * * * *
14115297 ATGTGCAAGCCGAGAATCGGCCGGGTCCCTTTTTGCGTGCTATCGATTCTGCTGCCGCAACCCTC
391 ATGCACAAGCCGAGAATCGGCCGGGTCCCTCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTC
* * *
14115362 AGTCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTATGCCACCCGACGAAATGAGTGG
456 AGTCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGG
** ** * * * * *
14115427 GCGGATGGGCGGGTGTGCAGGCAATACACTGGCCAGAAAGTTGGGATGCGTAAGCCGTGGATCGA
521 GCGGACAGGCGGACGGGCAGGCAATACACTGACCAGAAAGTCGGGATGCGCAAGCCGTGGATCAA
14115492 TAGGGTGGTAGGTGGGTTTAGCACATCTTCA
586 TAGGGTGGTAGGTGGGTTTAGCACATCTTCA
*
14115523 TAATGGCTACTGGCAAAAAACCTATAAAATCTCAAATGCTCTTT-GAGAGGGTGTGAGTTCTCGA
1 TAATGGCTACTGGCAAAAAACCTATAAAATCTCAAATGCTCTTTAAAG-GGGTGTGAGTTCTCGA
*
14115587 GGTTTAATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCATGTGC
65 GGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCACACATCATGTGC
* **
14115651 GTACACCCCCTCGGCCCCCCCAATCACCGGAACC-CTAATGCCACCGATCAGGTTCTCCGGTGAT
130 GAACACCCCC-CGGCCCCCCCAATCACCGGAACCTC-AATGCCACCGATCAGGTTCTCCGACGAT
* ** ** * * *
14115715 G-TTTCAGTGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCTCGAGCCCAGCATGT
193 GCTCT-AGTGATAATGCCCCGGCAAAGAAAAATGCAGCACCAACACATGCCCGAACCCAGCATGT
* * *
14115779 GCT-ACAGTAACCCTCGGTCCAATCTGATCTTAGACTGGGAATGAACTCAGTATGCTTAGACTGG
257 GCTGACA-CAACCCTCGGTCCAATCCGATCTTAGACT-GGAATGAACTCAGTATGCTTAGACTAG
* *
14115843 GGATGAACTCCGTATGCCTAAGTCAACCCACCAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGG
320 GAATGAACTCCGTATGCCTAAGTCAACACACCAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGG
* * * *
14115908 GGTGGGATGCACAAGCC-AGGGATCGGTCGGGTTCCC-CTCTGCGTGCTACCGATCCTGCTGTCA
385 GGCGGGATGCACAAGCCGA-GAATCGGCCGGG-TCCCTCTCTGCGTGCTACCGATCCTGCTGCCA
* * ** * *
14115971 CAACCCTCGGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGTCTAAGCCAACCGACGAA
448 CAACCCTCAGTCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * * *
14116036 ATGAGCGGGCGGGCAGGCGGACGGGCGGGCACTAC-GTCGACGAGAGAGTCGGGATGCGCAAGCT
513 ATGAGCGGGCGGACAGGCGGACGGGCAGGCAATACACT-GACCAGAAAGTCGGGATGCGCAAGCC
14116100 GTGGATCAATAGGGTGGTAGGTGGGTTT
577 GTGGATCAATAGGGTGGTAGGTGGGTTT
14116128 GGGAAAATCT
Statistics
Matches: 519, Mismatches: 77, Indels: 17
0.85 0.13 0.03
Matches are distributed among these distances:
615 61 0.12
616 196 0.38
617 258 0.50
618 4 0.01
ACGTcount: A:0.25, C:0.26, G:0.29, T:0.21
Consensus pattern (616 bp):
TAATGGCTACTGGCAAAAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAG
GTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCACACATCATGTGCG
AACACCCCCCGGCCCCCCCAATCACCGGAACCTCAATGCCACCGATCAGGTTCTCCGACGATGCT
CTAGTGATAATGCCCCGGCAAAGAAAAATGCAGCACCAACACATGCCCGAACCCAGCATGTGCTG
ACACAACCCTCGGTCCAATCCGATCTTAGACTGGAATGAACTCAGTATGCTTAGACTAGGAATGA
ACTCCGTATGCCTAAGTCAACACACCAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGGCGGG
ATGCACAAGCCGAGAATCGGCCGGGTCCCTCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTC
AGTCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGG
GCGGACAGGCGGACGGGCAGGCAATACACTGACCAGAAAGTCGGGATGCGCAAGCCGTGGATCAA
TAGGGTGGTAGGTGGGTTTAGCACATCTTCA
Found at i:14117495 original size:902 final size:901
Alignment explanation
Indices: 14115523--14118823 Score: 4093
Period size: 908 Copynumber: 3.7 Consensus size: 901
14115513 CACATCTTCA
** * * *
14115523 TAATGGCTACTGGCAAAAAACCTATAAAATCTCAAATGCTCTTTGAGAGGGTGTGAGTTCTCGAG
1 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
14115588 GTTTAATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCATGTGCG
66 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * ** ** *
14115652 TACACCCCCTCGGCCCCCCCAATCACCGGAACCCTAATGCCACCGATCAGGTTCTCCGGTGATGT
131 CACACCCCCCCGGCCCCCCCGATCGTCGGAACCC-AATGCCACCGATCAGGTTCTCCGACGATGC
* * * ** * *
14115717 TTCAGTGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCTCGAGCCCAGCATGTGCT
195 TCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * * * *
14115782 -ACAGTAACCCTCGGTCCAATCTGATCTTAGACTGGGAATGAACTC-AGTATGCTTAGACTGGGG
260 GCCA-CAACCCTCGGTCCAGTC-AATCTTAGACTGGGAATGAACTCTA-CATGCTTAGACTGGGA
* * *
14115845 ATGAACTCCGTATGCCTAAGTCAACCCACCAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGG
322 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * * * *
14115910 TGGGATGCACAAGCCAGGGATCGGTCGGGTTCCCCTCTGCGTGCTACCGATCCTGCTGTCACAAC
387 TGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTACAG-CCCAAC
* * *
14115975 CCTCGGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGTCTAAGCCAACCGACGAAATGA
451 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGA
* * * * *
14116040 GCGGGCGGGCAGGCGGACGGGCGGGCACTACG-TCGACGAGAGAGTCGGGATGCGCAAGCTGTGG
516 GTGGGC-GG-A--CGGGCGGGCGGGCACTACGCTCG-CCAGAGAGACGGGATGCGCAAGCCGTGG
* * * * **
14116104 ATCAATAGGGTGGTAGGTGGGTTTGGGAAAATCTTCATATTTTTATGTGCCAATGCCATTTTTAT
576 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTAT
*
14116169 GGCTTGTAAATTCATACAATGGTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGT
641 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGT
* * *
14116234 TTTTTATTTTTCA-CGATTTTTGAAACATTTTACGGTTCAAGATTTTTTAAAATTTTTTTGGAAG
706 TTTTTATTTTTCATC-ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAG
*
14116298 GTGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC--ATGCACAAACAAAT
770 GAGTTTTGGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATATGCA-AAA-AAAT
* * * * ** *
14116361 TCAGCCAAAAAGTCAAAGTGTACAAGATTTTGCGACCATATGAAAAAAGCATCCTCATTTCAGAC
833 TCAGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
14116426 ACTT
898 ACTT
*
14116430 TAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
1 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
14116495 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTTCG
66 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * *
14116560 CACACCCCCCCGGCCCCCCCGATCGTCGGAACCCGAACGCCGCCGGTCAGGTTCTCCGACGATGC
131 CACACCCCCCCGGCCCCCCCGATCGTCGGAACCC-AATGCCACCGATCAGGTTCTCCGACGATGC
* ** * * *
14116625 TCTGGCGATGGTGCCCCGGGGAAGAAAAATGTGGTACCAGCACATGCCCGAGCCCAGCATATGCT
195 TCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
*** * * *
14116690 GCCACAACCCTCGGTATGGTCAGATCTTAGATTGGGAAAGAACTCTACATGCTTAGACTGGAAAT
260 GCCACAACCCTCGGTCCAGTCA-ATCTTAGACTGGGAATGAACTCTACATGCTTAGACTGGGAAT
*
14116755 GAACTCGGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTG
324 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTG
* ** * * *
14116820 GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGAATGCTGCTGATCCTACTGCCCTAACCC
389 GGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTACAGCCC-AACCC
* * *
14116885 TTGGTCCGGTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACCGATC-AAATGAG
453 TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-CGAAATGAG
** * * *
14116949 TAAGCGGACGGGCGGGCGGGCACTACGCCCGCCAGAGAGACGGGATGCGTAAGCCGCGGATCGAT
517 TGGGCGGACGGGCGGGCGGGCACTACGCTCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* *
14117014 AGGGTGGTAGGTGGGTTTAGGCGCATCTTCATATTTTTGGGTGCCAATGCCA-TTTTATGGCTTG
582 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTATGGCTTG
*
14117078 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTTCTA
647 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTTTTA
* * *
14117143 TTTTTCATCATTTTTGAAACTTTTTCCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTT
712 TTTTTCATCATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* * *
14117208 -GCCCCAAACTTGGTAGACGTGACCCTTGTATTTTTGTTGGCATATGCAAAAAAATTCAGCTAAA
777 GGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATATGCAAAAAAATTCAGCCAAA
14117272 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
842 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14117332 TAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAG
1 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* * *
14117397 GTTTGATGAGGGATAGGCGGCCAGTATAAGGGCCAAGTTCCAGCACCCATCGCACATCATGTGCG
66 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * *
14117462 CACACCCCCCCCGG-CCCCCCGATCG-CTGGAACCCCAATGCTACCGGTCAGGTTCTCCGACAAT
131 CACA-CCCCCCCGGCCCCCCCGATCGTC-GGAA-CCCAATGCCACCGATCAGGTTCTCCGACGAT
* * *
14117525 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCTGAGCCGAGCATGTG
193 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
*
14117590 CTGCCACAACCCTCGGTCC-G---GTC-----C---G-AT---CT-T--A--C----ACTGGGAA
258 CTGCCACAACCCTCGGTCCAGTCAATCTTAGACTGGGAATGAACTCTACATGCTTAGACTGGGAA
* * * * * * * *
14117630 TGAACCCCGTATGCCTAAGTCTACCCATGAAACGAGCGTGCGAGCGCTTAGTCGCCCAGAGGGGC
323 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGT
* * * * * *
14117695 GGGATGCGCATGCAGAGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGATCCTACAGCCGCAACC
388 GGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTACAGCC-CAACC
* * * * *
14117760 CTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCCAACCGACGAAA--CG
452 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAG
* * *
14117823 T--GCGGGCGGGCGGGCGAGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
517 TGGGCGGACGGGCGGGCGGGCACTACGCTCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* * ** *
14117886 AGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGCGTGCCTGTGCCATTTTTATGGCTGG
582 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTATGGCTTG
* * ** *
14117951 TAATTTCATACAATGGTCCCTTAAGCCTTCACGGGAAGTTTCATGGCAAGATGACTTGTTTTTTA
647 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTTTTA
* ** * *
14118016 TTTTTCATGATTTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
712 TTTTTCATCATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* *** *
14118081 GGCCACAAACTTGGTACACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCGAAA
777 GGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATATGCAAAAAAATTCAGCCAAA
* *
14118146 AACTCGAAGTGTACAAGATTTTGTGGCCATTGGAAAAAAGTGTCCCCATTTCAGACACTT
842 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14118206 TAATAAG-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCCA
1 TAAT-GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
14118269 GGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGT
65 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* ** **
14118334 GCACA-CCCCCCGG-CCCCCCGATCGTCGAAACCTCAATGCCACCGATCACATTCTCCGGTGATG
130 GCACACCCCCCCGGCCCCCCCGATCGTCGGAACC-CAATGCCACCGATCAGGTTCTCCGACGATG
** ** * *
14118397 CTCCGATGATGGCACCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCATGTGC
194 CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * *** *
14118462 TACCGCAACCCTCGGTCTAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCTTAGAGTGGGAA
259 TGCCACAACCCTCGGTCCAGTC-AATCTTAGACTGGGAATGAACTCTACATGCTTAGACTGGGAA
* * * * * *
14118527 TGAACTCCGTATGCCTAAATCAACCCATGAAATGAGCGTGCGGGCACTCAGCTGGCCAGAGGGGG
323 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGT
* * * * * * * * *
14118592 GGGATGCGTAAGTCGGGGATTGGCTGGGTCCCCCTCTGTGTGCTACCAATCCAACAACTGCAACC
388 GGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTACAGC-CCAACC
* * * * *
14118657 CTCAGTTCGGTCTGATCTTAGCCTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAG
452 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAG
* * * * ** *
14118722 TGGGCGTG-TGGGCGGGCGTGCAGGCACTACACTGGCCAGAAAGGTGGGATGCGCTAGCCGTGGA
517 TGGGCG-GACGGGCGGGC--G--GGCACTACGCTCGCCAGAGAGACGGGATGCGCAAGCCGTGGA
*
14118786 TCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATA
577 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
14118824 ATGGCTACTG
Statistics
Matches: 2075, Mismatches: 263, Indels: 114
0.85 0.11 0.05
Matches are distributed among these distances:
870 2 0.00
871 117 0.06
872 104 0.05
873 208 0.10
874 159 0.08
875 2 0.00
876 170 0.08
877 1 0.00
880 1 0.00
881 1 0.00
882 1 0.00
884 2 0.00
885 4 0.00
888 3 0.00
889 1 0.00
891 1 0.00
893 1 0.00
897 165 0.08
899 2 0.00
901 13 0.01
902 343 0.17
903 147 0.07
904 98 0.05
905 74 0.04
906 1 0.00
907 77 0.04
908 373 0.18
909 4 0.00
ACGTcount: A:0.25, C:0.25, G:0.26, T:0.24
Consensus pattern (901 bp):
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCCCGGCCCCCCCGATCGTCGGAACCCAATGCCACCGATCAGGTTCTCCGACGATGCT
CCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCACAACCCTCGGTCCAGTCAATCTTAGACTGGGAATGAACTCTACATGCTTAGACTGGGAATGA
ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGG
ATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTACAGCCCAACCCTCG
GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGTGGG
CGGACGGGCGGGCGGGCACTACGCTCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTATGGCTTGTAAA
TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTTTTATTTT
TCATCATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
ACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATATGCAAAAAAATTCAGCCAAAAACT
CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
Found at i:14118524 original size:26 final size:26
Alignment explanation
Indices: 14118488--14118540 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14118478 CTAGTCTAAT
14118488 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14118514 CTTAGAGTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14118540 C
1 C
14118541 CTAAATCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14119141 original size:26 final size:26
Alignment explanation
Indices: 14119103--14119155 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14119093 CTAGTCTGAT
*
14119103 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14119129 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14119155 C
1 C
14119156 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14119384 original size:615 final size:615
Alignment explanation
Indices: 14118213--14119747 Score: 2466
Period size: 615 Copynumber: 2.5 Consensus size: 615
14118203 CTTTAATAAG
14118213 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCCAGGTTTGAT
1 TACTGGCAGCAAACCTGTAAAATCTC-AATGCTCTTTAAGGGGGTGTGAGTTCTCCAGGTTTGAT
14118277 GAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCC
65 GAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCC
*
14118342 CCCGGCCCCCCGATCGTCGAAACCTCAATGCCACCGATCACATTCTCCGGTGATGCTCCGATGAT
130 CCCGGCCCCCCGATCATCGAAA-CTCAATGCCACCGATCACATTCTCCGGTGATGCTCCGATGAT
*
14118407 GGCACCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCATGTGCTACCGCAACC
194 GGCACCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACC
* *
14118472 CTCGGTCTAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCTTAGAGTGGGAATGAACTCCGT
259 CTCGGTCTAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGT
* *
14118537 ATGCCTAAATCAACCCATGAAATGAGCGTGCGGGCACTCAGCTGGCCAGAGGGGGGGGATGCGTA
324 ATGCCTAAATCAACCCATGAAACGAGCGTGCGGGCACTCAGCTGGCCAGAGGGGCGGGATGCGTA
* * * *
14118602 AGTCGGGGATTGGCTGGGTCCCCCTCTGTGTGCTACCAATCCAACAACTGCAACCCTCAGTTCGG
389 AGTCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCAATCCAACAACTGCAACCCTCAGTTCGA
* *
14118667 TCTGATCTTAGCCTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGTGTG
454 TCTGATCTTAGCCTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTG
14118732 GGCGGGCGTGCAGGCACTACACTGGCCAGAAAGGTGGGATGCGCTAGCCGTGGATCGATAGGGTG
519 GGCGGGCGTGCAGGCACTACACTGGCCAGAAAGGTGGGATGCGCTAGCCGTGGATCGATAGGGTG
14118797 GTAGGTGGGTTTACGCACATCTTCATAATGGC
584 GTAGGTGGGTTTACGCACATCTTCATAATGGC
* *
14118829 TACTGGCAGCAAACCTGTACAATCTCAATGCTCTTTAAGGGGGTGTGAGTTCTCTAGGTTTGATG
1 TACTGGCAGCAAACCTGTAAAATCTCAATGCTCTTTAAGGGGGTGTGAGTTCTCCAGGTTTGATG
14118894 AGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCC
66 AGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCC
* * *
14118959 CCGGCCCCCCGATCATCGAAACTCAATACCACCGATCACATTCTCCGGTGATGCTTCGACGATGG
131 CCGGCCCCCCGATCATCGAAACTCAATGCCACCGATCACATTCTCCGGTGATGCTCCGATGATGG
* *
14119024 CACCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCT
196 CACCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCT
*
14119089 CGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTAT
261 CGGTCTAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTAT
* *
14119154 GCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCTGGCTAGAGGGGCGGGATGCGTAAG
326 GCCTAAATCAACCCATGAAACGAGCGTGCGGGCACTCAGCTGGCCAGAGGGGCGGGATGCGTAAG
* * *
14119219 -CTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCAAC-AGTCGTAACCCTCAGTTCGA
391 TC-GGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCAATCCAACAACT-GCAACCCTCAGTTCGA
14119282 TCTGATCTTAGCCTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTG
454 TCTGATCTTAGCCTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTG
14119347 GGCGGGCGTGCAGGCACTACACTGGCCAGAAAGGTGGGATGCGCTAGCCGTGGATCGATAGGGTG
519 GGCGGGCGTGCAGGCACTACACTGGCCAGAAAGGTGGGATGCGCTAGCCGTGGATCGATAGGGTG
14119412 GTAGGTGGGTTTACGCACATCTTCATAATGGC
584 GTAGGTGGGTTTACGCACATCTTCATAATGGC
* *
14119444 TACTGGCAGCAAACCTGTAAAATCTCAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCATG
1 TACTGGCAGCAAACCTGTAAAATCTCAATGCTCTTTAAGGGGGTGTGAGTTCTCCAGGTTTGATG
* * * * ** * *
14119509 AGGGATAGGGGGCCAATTTAAGGGCCAAGTACCAGAACCAATTGCATATCATGTGCGCACACCCC
66 AGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGTGCACA-CCC
* * ** * * ** * * *
14119574 CCCGGCCCCCCTGATCATCGGAACCCCAATGCTGCTGGTCAGGTTCTCCAGTGAAGCTCCGGTGA
130 CCCGGCCCCCC-GATCATC-GAAACTCAATGCCACCGATCACATTCTCCGGTGATGCTCCGATGA
*** ** * *
14119639 TGTTGCCCCGACGAAGAAAAATGCAGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGTAAC
193 TGGCACCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAAC
* * *
14119704 CCTCGATCTGGT-TCAATCTTAGACTGGGAATGAACTTCGTATGC
258 CCTCGGTCTAGTCT-AATCTTAGACTGGGAATGAACTCCGTATGC
14119748 CTAAGTCAAC
Statistics
Matches: 849, Mismatches: 63, Indels: 12
0.92 0.07 0.01
Matches are distributed among these distances:
614 3 0.00
615 564 0.66
616 149 0.18
617 8 0.01
618 125 0.15
ACGTcount: A:0.25, C:0.27, G:0.27, T:0.21
Consensus pattern (615 bp):
TACTGGCAGCAAACCTGTAAAATCTCAATGCTCTTTAAGGGGGTGTGAGTTCTCCAGGTTTGATG
AGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCC
CCGGCCCCCCGATCATCGAAACTCAATGCCACCGATCACATTCTCCGGTGATGCTCCGATGATGG
CACCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCT
CGGTCTAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTAT
GCCTAAATCAACCCATGAAACGAGCGTGCGGGCACTCAGCTGGCCAGAGGGGCGGGATGCGTAAG
TCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCAATCCAACAACTGCAACCCTCAGTTCGATC
TGATCTTAGCCTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTGGG
CGGGCGTGCAGGCACTACACTGGCCAGAAAGGTGGGATGCGCTAGCCGTGGATCGATAGGGTGGT
AGGTGGGTTTACGCACATCTTCATAATGGC
Found at i:14123096 original size:26 final size:26
Alignment explanation
Indices: 14123057--14123109 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14123047 CTGGTTCGAT
*
14123057 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14123083 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14123109 C
1 C
14123110 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:14123990 original size:26 final size:26
Alignment explanation
Indices: 14123961--14124013 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14123951 TCGGTCCGAT
14123961 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14123987 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14124013 C
1 C
14124014 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14124502 original size:895 final size:892
Alignment explanation
Indices: 14120567--14128375 Score: 9351
Period size: 892 Copynumber: 8.9 Consensus size: 892
14120557 GCCCAGCATG
* * * *
14120567 TGCTGCCACAACCCTC-GGCTTGGTCCGATCTTAGACTGGGAATGAACTCCGTACGCCTAAGCCA
1 TGCTGCCGCAACCCTCAGTC-TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
14120631 ACCGATGAAACGAGCGGGTGGGCGAACGGGCACTATGCCGACCAGAGAGACGGGATGCGCAAGCT
65 ACCGACGAAACAAGCGGG-CGG-G--CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * **
14120696 GTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTACATGCCAATGATATTT
126 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTT
* *
14120761 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAATTTCATGGCAAGATGAC
191 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14120826 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTTCGGTTTG-GATTTTTTAAAATTTTTTTGG
256 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGG
* * * *
14120890 AATGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAGAAA
321 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
14120955 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
386 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14121020 AACTTTAATGGCTACTGGCAGCAAACCTGTGAAATCTCAAATGCT-TTTCAAGGGGGTGTGAGTT
451 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTT
* * *
14121084 CTCGAGGTTTGATGGGGGATAGGGGGACAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
515 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
14121149 TGTGTGCATAGCCCCCTCGGCCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTTCG
580 TGTGCGCACA-CCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCG
* * * *
14121214 CCGATGCTCCGACGATGGTGCCCCGGCGAACAAAAATACGGCACCAGCACATGCCCGAGCCCAGT
643 GCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
14121279 ATGTGCTGCCGCAA-CC-C-TC-G--G-TC-----C--GG--T---CT--G-AT-CTTAGACTGG
708 ATGTGCTGCCGCAACCCTCGTCGGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * **
14121321 GAATGAACTCCGTATGCCTAAGTCAACTCATGAAACGAGCGTGCAGCCGCTCAGTTGGCCAGAGG
773 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
14121386 AGCGGGATGCGCAAGCTGGGGATCGACCTGGT-CCCCTCTGTGTGCTACCGATCC
838 GGCGGGATGCGCAAGCTAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * *
14121440 TACTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14121505 CCGACGAAACGAGCAGGCGGGCGAGCACTACACTGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
66 CCGACGAAACAAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
14121570 TCAATA-GGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GGATGCCAATGCCAGTTTTTA
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACG-TGCCAATGCCA-TTTTTA
* * * *
14121633 TGGCTTGTAAATTCATACAATGGTCCCCTAAGCCATCACATGAAGTTTCACGGCAAGACGACTCG
194 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* *
14121698 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAG
259 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAG
** * *
14121763 GAGTTTTGGCTGCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGCCATGCACAAAAAAATTC
324 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* *
14121828 AGCTAAAAACTCGAAGTGTACAAGATTTTCTGACCATTTGAAAAAAGTGTCCCCATTTTAGACAC
389 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
14121893 TTTAATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
454 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * *
14121958 AGGGTTGATGAGGGATAGGGGTCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTG
519 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * *
14122023 CGCATAGCCCCCCCGGCCCCTCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
584 CGCACA--CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGA
* * *
14122088 TGCTCCGACGATGGTGCCCCGGGGAAGAAAAATGCGGCACCAGCACATGTCCAAGCCCAGCATGT
647 TGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* *
14122153 GCTGTCGCAA--C-CATCGGTC---C----A----G--T---CT--G-AT-CTTAGACTGGGAAT
712 GCTGCCGCAACCCTCGTCGGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * * * * ** **
14122195 GAACTCCATGTGCCGAAGTCAACCTACGAAACAAGCACGCGGGCGCTCAGCCAACCAGAGGGGCG
777 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* * * *
14122260 GGATGCGCAAG-TCGGGGATCGATCGGGTCCCCCTCTGCATGTTGTCGATCC
842 GGATGCGCAAGCT-AGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
14122311 TGCTACTGCAACCCT-TGATCCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
1 TGCTGCCGCAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** *
14122375 ACCGATG--A-AA-CGAGTGGGCGGGCACTACGTTGGCCAGAGAGACAGGATGCGCAAGCCGTGG
65 ACCGACGAAACAAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
14122436 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAACGCCATTTTTAT
130 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
14122501 GGCTTGTAAATTCATACAAATGGT-CCTTAAG-CTTCACGGTGAAGTTTCATGGCAAGACGACTC
195 GGCTTGTAAATTCATAC-AATGGTCCCTTAAGCCTTCAC-GTGAAGTTTCATGGCAAGACGACTC
* ** * *
14122564 GTTTTCCTA-TTTTCACGATTTTCCAAAACTTTTTAC-GTT-GCAGAATTTTTAAAAATTTTTTC
258 GTTTT-CTATTTTTCATGATTTT-TGAAACTTTTTACGGTTCG-AG-ATTTTTTAAAATTTTTTT
* * *
14122626 GAAAGGAGTTTTGGCCCC-AACTT-GTAGACATGATCCTTTGTCATTTTTGTTGGTA-GCAC-AA
319 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGT-ATTTTTGTTGGCATGCACAAA
* *
14122687 ACAATTCAG-TAAAAAACACGAAGTGTACAAGA-TTTGTGACCATTTGAAAAAAGT-TCCCCCCC
382 AAAATTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-------
* * *
14122749 CCCCCCCCCCTTTTTAGACACTTTAAATGGCTACTGGCAGCAAACCTATACAAATCTCAAATGCT
439 ------CCCCATTTCAGACACTTT-AATGGCTACTGGCAGCAAACCTGTA-AAATCTCAAATGCT
* * *
14122814 CTTT-AGGGGGTGTGAGTTCTCGCGGTTTAATGAGGGATAGGGGTCCAATATAAGGGCCAAGTAC
496 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* *
14122878 CAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCCCTGATCGCCGGAACCCCAATGCC
561 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCC
* * * * * * * *
14122943 GTCAGTCAGGTTCTCCGGTGAAGCTCCGACGATGGTTCCCCGACAAAGAAAAATACGGCACCAAC
626 GCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGC
* * *
14123008 ACATGCCCGAGCCCAGTATGTGCTACCGTAACCCTCGATCTGGTTCGATCTTAGACTGGGAATGA
691 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-TC-GG-TCGATCTTAGACTGGGAATGA
* *
14123073 ACTCCGTATGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCG
753 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * *
14123138 GGCGCTCAGTCGGCCAGAGGGGTGGGATACGCAAGCGT-GGGATCGGTTGGGTCCCCCTCTGCGT
818 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC-TAGGGATCGATCGGGTCCCCCTCTGCGT
* *
14123202 GCTGTCGATCT
882 GCTGCCGATCC
* * * * * *
14123213 TGCTGTCGTAACCCTCGGTCCGAT-TCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
1 TGCTGCCGCAACCCTCAGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14123277 ACCGACGAAATGAACGGGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGACACGGGATGCGCA
65 ACCGACGAAA-CAA---GCGGGC--G-G-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
14123342 AGCCGTGGATCGATAGGGTGGTAGGTGGGTCTAGGCACATCTTCATATTTCTGCGTGCCAATGCT
122 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCC
* *
14123407 ATTTTTATGCCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGA
187 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
14123472 CCACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGCTC-AGGATTTTTGAAAATTTT
252 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTT
* * *
14123536 TTTGGAAGGAGTTTTGGCCCCAAACTTGATAAACGTGATCCTTGTATTTTTTTTGGCATGCACAA
316 TTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
14123601 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
381 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
14123666 TCAGACACTTTAATTGCTACTGGCAGCAAACCTGTTAAATCTTAAATGCTCTTTAAGGGGGTGTG
446 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
**
14123731 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTACAC
511 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
14123796 ATCATGTGTGCCCACCCCCTCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCT
576 ATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCT
* * ** ** * *
14123861 CCGGTGAAGCTCCGACGATGGTGCCCCACCGAAGAAAAATGCGGCACCAAAATATGCCCAAGCCC
640 CCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
*
14123926 AGCATGTGCTGCCGTAACCCTCGATTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
705 AGCATGTGCTGCCGCAACCCTCG--TCGGT-CGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* *
14123991 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAGCGAGCGTGCGGGCGCTCAGCCGG-
767 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * *
14124055 CAGAGGGGCAGGATGCGCAAGCTAAGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCC
832 CAGAGGGGCGGGATGCGCAAGCTAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** *
14124116 TGCTGCCGCAACCCTCAATCTGGTCAAATCTCAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14124181 TCGACGAAACAAACGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
66 CCGACGAAACAAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
14124246 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCCTTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
* * *
14124311 GCTTGTAAATTCATACTATGGTCCCTTAAGCCTTCACGTAAAGTTTCAGGGCAAGACGACTCGTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
** *
14124376 TTCTATTTTTCATGATTTTTGAAACTTTTGGCAGTTCGAGATTTTTTAAAATTTTTTTGGAAGGA
261 TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGA
* * * *
14124441 GTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAAATT-TG
326 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
14124505 ACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
391 -CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * **
14124570 TTAATGCCTACTGCCTCCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
455 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * * *
14124635 GGTTTGATGAGGGACAAGAGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTGC
520 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * *
14124700 GCACACCCCCCCGGCCCCCCCGATTGCCGGAACACCAATGCCGCCGGTCAGG---T-------T-
585 GCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATG
** * * ** ** * *
14124754 CTCCGACGATGGTGCGTCGGTGAAGAAAAATGTGGCACCAGTGCATTACCGAGCTCAACATGTGC
649 CTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * *
14124819 TGCCG-AAGCCCTCGGCCCTGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGA
714 TGCCGCAA-CCCTC-G-TCGGT-CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * *
14124883 ATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCCGGCGTTCAACCGGCCAGAGGGG
775 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * * *
14124948 CGAGATGCACAAGCCAGGGATCAATTGGGTCCCCTTCTGCGTGCTGCCGATCC
840 CGGGATGCGCAAGCTAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * *
14125001 TGCTGTCAAAACCCTCAGCCTGGTCTGATCTTAGACTGGGAATGAACTACATATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
14125066 CCGACGAAACAAGCGGGCGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
66 CCGACGAAACAA----GC--G-GG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * *
14125131 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGGCAGTGCCA
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
*
14125196 TTTTTATGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
188 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
14125261 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGATTCTG-GATTTTTTAAAATTATT
253 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTT
* **
14125325 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTACTTTTT-TTGTAATGCACAA
317 TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAA
** ** * *
14125389 AAACTTTTGGCTAAAAACTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAAAGTG-CCTCCAT
381 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC-CCAT
* *
14125453 TCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGC
445 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
** * *
14125518 GAGTTCT-TTGGTTTCATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACA
510 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
** * * * * *
14125582 CATCATGTGCAAACACCCACCCGGCCACCCCGATCGTCGAAACCCCAATGCTGCCCGTCAGGTTC
575 CATCATGTGCGCACACCC-CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTC
* * *
14125647 T-C--C---G----G-CGATGGTGCTCCGGTGAAGAAAAATGCGGCACCAGCACATGCTCGAGCC
639 TCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * *
14125701 AAGCAAGTGCTGCCGCAACCCTTTGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
704 CAGCATGTGCTGCCGCAACCC-TCGT-CGGT-CGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * * *
14125766 AGCCTGGGAATGAACTCCGTATGCCTAAGTTAACACACGAAACGAGCATGCGGGCGCTCAGTCGG
766 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * ** * *
14125831 CCAGAGGGGCGAGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGTGTGCTACCGATCC
831 CCAGAGGGGCGGGATGCGCAAGCTAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
*
14125893 TGCTGCCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14125958 CCGACGAAACGAGCGGGCGGGCGGGCGGGTTGGCACTACGCCGGCTAGAGAGACGGGATACGCAA
66 CCGACGAAAC-A---AGCGGGCGGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
14126023 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
* *
14126088 TTTTTATGGCTTATAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
188 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * * * * *
14126153 GACTCGTTTTCTATTTTTCATGA-TTTCGAAAGTTTTTGCTGTTCCAAATTTCTTAAAATTATTT
253 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
* * * * * *
14126217 TAGAATGAGTTTTTGCCCCAAACTTCGTAGACGTGATCCTTGTCTTTTTGTTGGCATACACAAAA
318 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
14126282 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGAGACCATTTGAAAAAAGTGTCCCCATTTC
383 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14126347 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAG
448 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
14126412 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
513 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
14126477 CATATGCGCACACCCCCCGG-CCCCCCGATCGTCGAAACCCCAAT---GCC-GTC-GG-TAT---
578 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCG
* * ** * * * * * * * *
14126532 G-G-TTCTTCGACGATGGCACCCCGACAAAGAAAAATACGACGCAACCACATGCTCGAGCCCAGC
643 GCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
14126595 ATGTGCTGCCGCAA-CC-C-TC-G--GA-C-----C--GG--T---CT--G-AT-CTTAGACTGG
708 ATGTGCTGCCGCAACCCTCGTCGGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * *
14126637 GAATCAACTCCGTATGCCTAGGTCAACCCACGAAACGAGCGTGCGGCCGCCCAGCCGACCAAAGG
773 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * *
14126702 GGCGGGATGCGGAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGTTGCCAATCC
838 GGCGGGATGCGCAAGCTAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* *
14126757 TGCTGCCACAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* ** * * * * * ** *
14126822 CCGATGAAATGAGCGGGTGAATGGGTGGGCACTACGTCGGCCAAAGAGACGAGATATGCAAGTCG
66 CCGACGAAACAAGC-GG-G--CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
14126887 TGGATCGATA-GGTGGTAGGTGGGTTTAGGGACATCTTCATATTTCTACATGCCAATGCCATTTT
127 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
* * * *
14126951 TATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCTAGACAACT
192 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * * * *
14127016 CATCTTCTATATTTCATGAATTTGGAAACTTTTTGCGGTTCGAGATTTTTTAAACTTTTTTT-GA
257 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGA
* *
14127080 AGGAGTTTTAGCCCCAAACTTGGTAGACGTGATGCTTGTATTTTTGTTGGCATGCACAAAAAAAT
322 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
14127145 TCAGATAAAAACTCGAAGCGTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
387 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
14127210 ACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGGTCT
452 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
14127275 CG-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACATCATG
517 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* ** * * * * *
14127339 TGTG-A-AAACCCCAGCCCCCTCGACCGCCGGAACCCCAATGCCG-CTGTCAGGTTCT-CGACGA
582 TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGA
** ** * *
14127400 TGCTTTGGTGATAGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
647 TGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
14127465 GCT------A-----------C---C---G-C-----A--AACTCCGTATGCTTAGACTGGGAAT
712 GCTGCCGCAACCCTCGTCGGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * * * *
14127499 GAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTACAGGTGTTCAGCCGGCCAGAGGGGCG
777 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* * * *
14127564 GGATGCGCAAG-TCAGGGATCGGTCGGGTCCCCCTCTACATGCTGCCGATGC
842 GGATGCGCAAGCT-AGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
14127615 TGCTACCGCAAGCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14127680 CCGACGAAACGAGCGGGCGTGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGAA
66 CCGACGAAACAAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
** *
14127745 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATT
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
* * * *
14127810 TCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCTCATGAAGTTTCATGGCAAGACGACTCTTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * ** * *
14127875 TTCTATTTTTCATGATTTTCGAAACCTTTGGCGGTTCGGGATTTTTTAAAAATCTTTTTGGAAGG
261 TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAAATTTTTTTGGAAGG
* *
14127940 AGTTTTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATT-
325 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-CAAAAAAATTC
* *
14128004 AGCTAAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACAC
389 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
14128069 TTTAATGGCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAAGGTGGTTTGAGTTCTC
454 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTC
* * ** *
14128134 GGGGTTTGATGAGGGATAGGGGGCCGATATAAGGG-CAATGTATGAGCACCCATCACACATCATG
518 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA-GTACCAGCACCCATCGCACATCATG
* * * * *
14128198 TGCGCACA-CCCCCGG-CCCACCGATC-TCGAAACCCCAATGCCGCCAGTCAGGCTCTCCAGCGA
582 TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGA
* * * * *
14128260 TGCGCCGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGTCCGAGCCCAGCATGT
647 TGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* *
14128325 GCTGCCGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAAAGAACTCCGT
712 GCTGCCGCAACCC-TCGTC-GGT-CGATCTTAGACTGGGAATGAACTCCGT
14128376 TTGCCTAAGC
Statistics
Matches: 6020, Mismatches: 696, Indels: 419
0.84 0.10 0.06
Matches are distributed among these distances:
853 1 0.00
854 48 0.01
855 150 0.02
856 17 0.00
857 181 0.03
858 292 0.05
859 387 0.06
860 150 0.02
861 5 0.00
862 4 0.00
864 184 0.03
865 25 0.00
866 103 0.02
867 138 0.02
868 155 0.03
869 150 0.02
870 478 0.08
871 90 0.01
872 2 0.00
873 71 0.01
874 2 0.00
875 1 0.00
876 114 0.02
877 17 0.00
878 108 0.02
879 19 0.00
880 4 0.00
881 4 0.00
882 2 0.00
883 3 0.00
884 158 0.03
885 121 0.02
886 5 0.00
887 4 0.00
888 5 0.00
889 7 0.00
890 84 0.01
891 212 0.04
892 627 0.10
893 393 0.07
894 16 0.00
895 500 0.08
896 7 0.00
897 1 0.00
898 2 0.00
899 5 0.00
900 1 0.00
901 3 0.00
902 187 0.03
903 222 0.04
904 233 0.04
905 2 0.00
906 2 0.00
910 3 0.00
912 1 0.00
913 65 0.01
914 179 0.03
915 46 0.01
916 23 0.00
917 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (892 bp):
TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACAAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCT
CCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTCGTCGGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
GCGCAAGCTAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
Found at i:14124881 original size:26 final size:26
Alignment explanation
Indices: 14124845--14124897 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14124835 CCTGTCCGAT
*
14124845 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14124871 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14124897 C
1 C
14124898 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14125766 original size:26 final size:26
Alignment explanation
Indices: 14125737--14125789 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14125727 CCGGTCCGAT
14125737 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14125763 CTTAGCCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14125789 C
1 C
14125790 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14129304 original size:718 final size:707
Alignment explanation
Indices: 14127615--14129804 Score: 3213
Period size: 709 Copynumber: 3.1 Consensus size: 707
14127605 CTGCCGATGC
* * * * *
14127615 TGCTACCGCAAGCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14127680 CCGACGAAACGAGCGGGCGTGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGAA
66 CCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
** *
14127745 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATT
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* * * *
14127810 TCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCTCATGAAGTTTCATGGCAAGACGACTCTTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
** **
14127875 TTCTATTTTTCATGATTTTCGAAACCTTTGGCGGTTCGGGATTTTTTAAAAATCTTTTT-GGAAG
261 TTCTATTTTTCATGATTTTCGAAAATTTTTACGGTTCGGGATTTTTT-AAAAT-TTTTTCGGAAG
* * *
14127939 GAGTTTTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATT
324 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCA-CAAAAAAATT
*
14128004 -AGCTAAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACA
388 CAGCTAAAAACT-CAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
14128068 CTTTAATGGCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAAGGTGGTTTGAGTTCT
452 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCT
* *
14128133 CGGGGTTTGATGAGGGATAGGGGGCCGATATAAGGG-CAATGTATGAGCACCCATCACACATCAT
516 CGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA-GTATGAGCACCCATCGCACATCAT
* * * * * *
14128197 GTGCGCACA-CCCCCGGCCCACCGATC-TCGAAACCCCAATGCCGCCAGTCAGGCTCTCCAGCGA
580 GTGCGCACACCCCCCAGCCC-CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGATCTCCGGCGA
* * * * *
14128260 TGCGCCGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGTCCGAGCCCAGCATG
644 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
14128324 TGCTGCCGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAAAGAACTCCGTTTGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14128389 CCGACGAAACGAGCGGGCGGGCGGGCACTATGTCAGCCAGAGAGTCGGGATGCGCAAGCCGTGGA
66 CCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
14128454 ACGATAGGGTGGTAGGTGGGTTTAGGGACATCTTCATATTTCTGCATGCCAATTCCATTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* *
14128519 GCTTGTAAAATCATACAATGGTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * *
14128584 TTCTATTTTTCACGATTTTTGAAATTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCGCAAGGA
261 TTCTATTTTTCATGATTTTCGAAAATTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
*
14128649 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCACAAAAAAATTCA
326 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTATTGGCATGCACAAAAAAATTCA
*
14128714 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCACTTCAGACACT
390 GCTAAAAACTC-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
14128779 TTAATGGCTACTGGCAGCAAACCTGTAAAATGTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
454 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGG
* *
14128844 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATGAGAACCCATCGCACAACATGTGC
519 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATGAGCACCCATCGCACATCATGTGC
*
14128909 GCACACCCCCCAGCCCCCTGATCGCCGGAACCCCAATGCTGCCGGTCAGGATCTCCGGCGATGCT
584 GCACACCCCCCAGCCCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGATCTCCGGCGATGCT
* * * *
14128974 TCGACGATGGTGCCCCGAGGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCCTG
648 CCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
14129034 TGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAACGAACTCCGTATACCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
14129099 CTGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGTGCAA
66 CCGACGAAACGA--------GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
* * * *
14129164 GCCGTGGATCGGTAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTTCTACATGCCAACGCCA
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * * *
14129229 TTTTCATGGCTTGTAATTTCATACAATGGTCCCTTAAGCCGTCACGTGAAGTTTCACGGCAAGAT
188 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * *
14129294 GACACGTTTTCTATTTTTCATGATTTTCAAAAATTTTTACGGTTCAGGATTTTTTAAAATTTTTT
253 GACTCGTTTTCTATTTTTCATGATTTTCGAAAATTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * ** **
14129359 CGGAAGGTGTTTTGGCCCCAAACTTGTTAGATTTGATCCTTGTATTTTTATTGGTGTGCACAAAA
318 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAA
* *
14129424 AAATTCAGCTAAAAACTCAGAGTGTACAAGATTTTGTGACCGTTTGAAAAATGTGTCCCCATTTC
383 AAATTCAGCTAAAAACTCA-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14129489 AGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
447 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* **
14129554 TTCTCGGGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
512 TTCTCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATGAGCACCCATCGCACAT
* * * *
14129619 CATGTGCGCACACCCCCCAACCCCCGATCGCCGGAACGCCAATGCCGCTGGTCAGGTTCTCCGGC
577 CATGTGCGCACACCCCCCAGCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGATCTCCGGC
* * * *
14129684 GATGCTCCGGCAATGGTGCCCCGACGAAGAAGAATGTGGCGCCAGCACATGCCCGAGCCCAGCAT
642 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCAT
14129749 G
707 G
* *
14129750 TGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACT-GGAATGAACTCCGTATGC
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
14129805 TTAGACTGGG
Statistics
Matches: 1331, Mismatches: 133, Indels: 28
0.89 0.09 0.02
Matches are distributed among these distances:
707 5 0.00
708 140 0.11
709 406 0.31
710 157 0.12
715 16 0.01
716 129 0.10
717 224 0.17
718 254 0.19
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.26
Consensus pattern (707 bp):
TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTCGAAAATTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAG
CTAAAAACTCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGGGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATGAGCACCCATCGCACATCATGTGCGC
ACACCCCCCAGCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGATCTCCGGCGATGCTCCG
ACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
Found at i:14129813 original size:25 final size:26
Alignment explanation
Indices: 14129779--14129830 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14129769 CTGGTCTGAT
14129779 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14129804 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14129830 C
1 C
14129831 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 8 0.31
26 18 0.69
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14132823 original size:26 final size:26
Alignment explanation
Indices: 14132787--14132837 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14132777 CCGGTCCGAT
* *
14132787 CTTATACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14132813 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
14132838 AACTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.18, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14134203 original size:874 final size:881
Alignment explanation
Indices: 14132059--14135428 Score: 4312
Period size: 899 Copynumber: 3.8 Consensus size: 881
14132049 ATGTGCTGCT
* ** *
14132059 GCAACCCTCGGTTTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCGACGA
1 GCAACCCTAGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
14132124 AATGA--------GCGGGCGGGCACTATGAT-GGCCAGAGAGACGGGATGC-CTAAGCTGTAGAT
66 AACGAGCGGGCGGGCGGGCGGGCACTACG-TCGGCCAGAGAGACGGGATGCGC-AAGCCGTGGAT
* *
14132179 CGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG-CATTTTTATGG
129 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
*
14132243 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTT
194 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTT
* * * ** *
14132308 TTTATTTTTCGCGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTTAAAATTCCTTCAAAAGGA
259 TCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGA-TTTTTTAAAATTTTTTCGAAAGGA
*
14132373 GTTTTAGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
323 GTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
14132438 -TGAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
388 CT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
14132502 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
452 TTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
*
14132567 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACAT-ATGTGC
517 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * *
14132631 ACACACCCCCCCAGTCCCCCCGATCATCGGAATCCCAATGCTGTCGGTCAGGTTCTTCGACGATG
582 GCACA-CCCCCCAGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
* * * * * * *
14132696 CTCTGGCGATGGTGCCCTGACGAAGAAAAAAGTGGTC-CCAGCACATGCCCAAGCCCAGCATATG
646 CTCCGACGATGGTGCCCCGACGAAGAAAAATGTGG-CACCAGCACATGCCCGAGCCCAGAATGTG
*
14132760 CTGCCGCAACCCTCGATCCGGTCCGATCTTATACTGGGAATGAACTCTGTATGCTTAGACTGGGA
710 CTGCCGCAACCCTCG-T-C-G--CG---TT-TAC-GGG-AT---C-C-ATATGCTTAGACTGGGA
** *
14132825 ATGAACTCCGTATAACTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
759 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * *
14132890 CGGGATGTGCATGCCGGGGATCAACCGGGTCCCCTTCTGCGTGCTGTCGATCTTACTACC
824 CGGGATGCGCAAGCCGGGGATCGACCGGGTCCCC-TCTGCGTGCTGT-GATCCTGCTACC
* * * * * * **
14132950 GTAACCCTTGGTCCGGTCTGATCTTAGACCGGGAATGAACTCTGTATGCCTAAGCCAACCGATAA
1 GCAACCCTAGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* *
14133015 AATGAGCAGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGG
66 AACGAGC--G--GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * **
14133080 ---G-T-CGGTAG--GGT-GG--TAGG-------T-ATA-TT-TGGGTGCCAATGCCATTTTTAT
127 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
** * *
14133125 GGCTTGTAAATTCATACAATCATCCATTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCAT
192 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCAT
* * * *
14133190 TTTCTATTTTTCATGATTTTTAAAACTTTTTTCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGG
257 TTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGG
* * * * *
14133255 TGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTTGCATGCAAAAAAAAATTCA
322 AGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
14133320 GCTAAAAACTCGAAGCGTACAAGTTTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
387 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * *
14133385 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAATTCTTGA
452 TTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
*
14133450 GGTTTGATGAGGGATAGGGGGCCAATACAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
517 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
14133515 GCACACCCCCTTCGGCCCCCCCAATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGAT
582 GCACACCCCC--CAGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * *
14133580 GCTCCGACGATGGTGCCCCGACGAAGGAAAATGCGGCACCAGCACATACCCGAGCCCA-ACATGT
645 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGA-ATGT
*
14133644 GCTGCCGCAA-CC-C-TCG-G-TT-C-GG-TCC-TAT-CTTAGACTGGGAATGAACTCCGTATTC
709 GCTGCCGCAACCCTCGTCGCGTTTACGGGATCCATATGCTTAGACTGGGAATGAACTCCGTATGC
*
14133699 CTAAGTCAACCCACGAAACGAGCGTGCGGGCAG-TCAGCCGGCCAGA-GGGCGGGATGCGTAAGC
774 CTAAGTCAACCCACGAAACGAGCGTGCGGGC-GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
* * ***
14133762 CAGGGATCGACCGAGTCCCTCTCTGCGTGCTGCTGATCCTGCCGTC
838 CGGGGATCGACCGGGTCCC-CTCTGCGTGCTG-TGATCCTGCTACC
* * * *
14133808 GCAACCCTAGATCCGATCCAATCTTAGACTGGGAATGAACTCCGTATACCTAAGACAACCGACGA
1 GCAACCCTAGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
14133873 AACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGCA-ACGGGATGCGCAAGCCGTGGATC
66 AACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAG-AGACGGGATGCGCAAGCCGTGGATC
* * *
14133937 GATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAGTGCCATTTTTATAGC
130 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
*
14134002 TTGTAAATTCATAC-ATCGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
195 TTGTAAATTCATACAAT-GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTT
* * *
14134066 TCTATTTTTCACAATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAG
259 TCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAG
*
14134131 TTTTAGCCGCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
324 TTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
14134196 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTT
389 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
14134261 AATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAATGGGGTGTGAGTTCTCGAGG
454 AATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
14134326 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCACACATCATGTGCGT
519 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * *
14134391 ACACCCCCC-GACCCTCCCGATCGTCAGAACCCCAATGCCGCCGATCAGATTCTCCGACGATGCT
584 ACACCCCCCAG-CCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT
* * * *
14134455 CCGATGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCATATGCCCGAGCCTAGAATGTGCTG
648 CCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGAATGTGCTG
* *
14134520 CCGCAACCCTCGGATCGATCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGATTGGTAATG
713 CCGCAACCCTC-G-TCG---CG-T-TT--AC--GG---G-A-TCCATATGCTTAGACTGGGAATG
* * * *
14134585 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGGGCTCAGCTGGCCAGAGGGGTGG
762 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * ** *
14134650 GATGCGCAAGCTGGGGATCGGCTGGGTCCCCCTCTATGTGCTGTCATTCCTGCTACC
827 GATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTGA-TCCTGCTACC
* ** * * * * * * * *
14134707 GCAACCCTCGGTTTGGTCTGATCATAAACTGAGAATGAACACCATATGCCTAAGCCAACTGACGA
1 GCAACCCTAGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
** * * *
14134772 AATC-AGCGGGCCAGCGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATC
66 AA-CGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
14134836 GATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTTCATGTCAATGCCATTTTTATGGC
130 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* * * *
14134901 TTGTAAATTCATACAATGGTCCCTTAAGCTTTGACATGAAGTTTCCTGGCAAGACGACTCATTTT
195 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTT
* * * *
14134966 CTATTTTTCATGATTTTCGAAGCTTTTTACGGTTC-ATGATTTTTTAAAATTTGTTT-GGAAGGA
260 CTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA-GATTTTTTAAAATTT-TTTCGAAAGGA
* *
14135029 GTTTTGGCCCCTAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
323 GTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* *
14135094 CTAAAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACACTT
388 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14135159 TAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGATGTGAGTTCTCGAG
453 TAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
14135224 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATAATGTGCG
518 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * *
14135289 CACGCCCCCCAG-CCCCCCGATCACCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGCT
583 CACACCCCCCAGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT
*
14135352 CCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGAATGTGCTG
648 CCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGAATGTGCTG
* *
14135417 CTGTAACCCTCG
713 CCGCAACCCTCG
14135429 GTCCAATCCG
Statistics
Matches: 2170, Mismatches: 225, Indels: 163
0.85 0.09 0.06
Matches are distributed among these distances:
854 50 0.02
855 1 0.00
856 1 0.00
857 1 0.00
858 108 0.05
859 74 0.03
860 4 0.00
861 3 0.00
862 3 0.00
863 1 0.00
864 4 0.00
866 1 0.00
868 2 0.00
870 1 0.00
871 3 0.00
872 114 0.05
873 7 0.00
874 388 0.18
876 1 0.00
877 3 0.00
879 1 0.00
880 1 0.00
881 2 0.00
883 274 0.13
884 124 0.06
885 108 0.05
886 1 0.00
887 1 0.00
890 1 0.00
891 59 0.03
893 5 0.00
895 2 0.00
896 7 0.00
897 104 0.05
898 85 0.04
899 571 0.26
900 11 0.01
902 1 0.00
903 41 0.02
904 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (881 bp):
GCAACCCTAGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
AACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTC
TATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTT
TTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
ACCCCCCAGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCG
ACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCCG
CAACCCTCGTCGCGTTTACGGGATCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
GACCGGGTCCCCTCTGCGTGCTGTGATCCTGCTACC
Found at i:14134584 original size:26 final size:26
Alignment explanation
Indices: 14134544--14134596 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14134534 TCGATCCGAT
14134544 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* * *
14134570 CTTAGATTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14134596 C
1 C
14134597 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14136194 original size:26 final size:26
Alignment explanation
Indices: 14136154--14136206 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14136144 TCGGTTCGAT
14136154 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
14136180 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14136206 C
1 C
14136207 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14136616 original size:730 final size:710
Alignment explanation
Indices: 14134734--14136902 Score: 2844
Period size: 712 Copynumber: 3.0 Consensus size: 710
14134724 CTGATCATAA
* * * * * * ** ** *
14134734 ACTGAGAATGAACACCATATGCCTAAGCCAACTGACGAAATCAGCGGGCCAGCGGGCAGGCACTA
1 ACTGGGAATGAACTCCATATGCTTAAGCCAACCGACAAAACCAGAAGGCGGGCGGGCTGGCACTA
* *
14134799 CGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
66 CGCCGGCCAGAGAGACGGGATGCGCAAGGCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* * * *
14134864 TCATCATATTTCTTCATGTCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
131 TCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * * * * *
14134929 CTTTGACATGAAGTTTCCTGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCGAAGCTTTTT
196 CCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTT
* *
14134994 ACGGTTC-ATGATTTTTTAAAATTTGTTTGGAAGGAGTTTTGGCCCCTAACTTGGTAGACGTGAT
261 ACGGTTCGA-GATTTTTTAAAATTT-TTTGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGAT
* *
14135058 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTGT
324 CCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
14135123 GACCATTTGAAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAA
389 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
*
14135188 TCTCAAAC-GCTCTTTAA-GGGGATGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
454 TCTC-AACTGCTCTTTAAGGGGGA-GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATAT
** * * * * **
14135251 AAGGGCCAAGTACCAGCACCCATTGCACATAATGTGCGCACGCCCCCCAGCCCCCCGATCACCGG
517 AAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCAGATCGTCGG
** **
14135316 AACCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAAT
582 AACCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAAT
* * ** *
14135381 GTGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCTGTAACCCTCGGTCCAATCCGATCTTAG
647 GCGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCTGTAACCCTC-GTTCGGTTCGATCTTAG
* * * *
14135446 ATTGGGAATGAACTCCGTATGCTTAAGCCAACCGACAAAACGAGCAGGCGGGCGGGCTGGCACTA
1 ACTGGGAATGAACTCCATATGCTTAAGCCAACCGACAAAACCAGAAGGCGGGCGGGCTGGCACTA
* * * *
14135511 CGCCGACCAGAGAGACAGGATGCGCAAGGCATGGATCGATAGGGTGGTAGGTGGGTTTAGGTACA
66 CGCCGGCCAGAGAGACGGGATGCGCAAGGCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* * *
14135576 TCTTCAAATTTCTGCGAGCCAACGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
131 TCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
14135641 CCTTCACATGAAGTTTCACGGCAAGACGACTCGTGTTCTATTTTTCACGATTTTCAAAACTTTTT
196 CCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTT
** * * * * * *
14135706 GTGGTTCGGGATTTTTGAAAATTTTTTCCGAATGAGTTTTT-GCCCGAAACTTCGTAGACGTGAT
261 ACGGTTCGAGATTTTTTAAAATTTTTT-GGAAGGA-TTTTTGGCCCCAAACTTGGTAGACGTGAT
** * * *
14135770 CCTTGTATGATTTTCGGCAAGCACAAAAAAATTGAGCTAAAAACTCGAAGTGTACAAGATTTTGT
324 CCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
14135835 GACCATTTCAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
389 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
14135900 TCTCAACTGCTCTTTAAGGGGGAGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
454 TCTCAACTGCTCTTTAAGGGGGAGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
*
14135965 GGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCAGATCGTCGGGA
519 GGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCAGATCGTCGGAA
* *
14136030 CACCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCTCCGGTGAAGAAAAATG
584 C-CCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATG
* *
14136095 CGGCATCAGCACATGCCCGAGCCCAGAATGTGCTGCTGGAACCCTCGATTCGGTTCGATCTTAG
648 CGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCTGTAACCCTCG-TTCGGTTCGATCTTAG
**
14136159 ACTGGGAATGAACTCCATATGCTTAGACTGGTAATGAACTCCGTATGCCTAAGTCAACCCATGAA
1 ACTGGGAATGAACTCCATATGCTTA-A---G---CCAA--CCG-A---C-AA---AA-CCA-G-A
* * * *
14136224 ACGAGCGTGCGGG-T-GCTC-A-GCTGGCCAGAAAGACGGGATGCGCAAGGCGTGGATCGATAGG
46 A-G-GCGGGCGGGCTGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGGCGTGGATCGATAGG
* * *
14136285 GTGGTAGGTGGGTTTAGGCACATCTTCATATATCTGCGTGCCAATGTCATTTTTATGGCATGTAA
109 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAA
* * * *
14136350 ATTCATACAAAGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG-CGACCCGTTTTTTATTT
174 ATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * *
14136414 TTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTCAAATATTTTTGGGAGGATTTTTGGC
239 TTCACGATTTTCGAAACTTTTTACGGTTCGAGATTTTTTAAAAT-TTTTTGGAAGGATTTTTGGC
* * * *
14136479 CCCAAACCTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTGAAAAC
303 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAAC
*
14136544 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCT
368 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
14136609 ACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
433 ACTGGCAGCAAACCTGTAAAATCTCAACTGCTCTTTAAGGGGGAGTGAGTTCTCAAGGTTTGATG
* *
14136674 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATTTGCGCACACCCC
498 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA-CCC
* * * * * *
14136739 CCCGACCCGCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGATCTCCAGTGATGCTCTGGTGA
562 CCCGGCCC-CCAGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGA
* * ** * * * *
14136804 TGGTGCCCCGGTGAAGAAAAATACGACACCAAAACATGCCCGAGCCTAGCATGTGCTACCGTAAC
625 TGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCTGTAAC
* *
14136869 CCTCGGTCTGGTTTGATCTTAG
690 CCTCGTTC-GGTTCGATCTTAG
14136891 ACTGGGAATGAA
1 ACTGGGAATGAA
14136903 ATTCGTATGC
Statistics
Matches: 1268, Mismatches: 154, Indels: 50
0.86 0.10 0.03
Matches are distributed among these distances:
711 6 0.00
712 500 0.39
713 144 0.11
714 1 0.00
717 1 0.00
720 2 0.00
722 3 0.00
723 1 0.00
726 1 0.00
727 2 0.00
729 5 0.00
730 297 0.23
731 158 0.12
732 132 0.10
733 5 0.00
734 2 0.00
735 8 0.01
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.26
Consensus pattern (710 bp):
ACTGGGAATGAACTCCATATGCTTAAGCCAACCGACAAAACCAGAAGGCGGGCGGGCTGGCACTA
CGCCGGCCAGAGAGACGGGATGCGCAAGGCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
TCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
CCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTT
ACGGTTCGAGATTTTTTAAAATTTTTTGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCC
TTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
TCAACTGCTCTTTAAGGGGGAGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
GCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCAGATCGTCGGAACC
CAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATGCGG
CACCAGCACATGCCCGAGCCCAGAATGTGCTGCTGTAACCCTCGTTCGGTTCGATCTTAG
Found at i:14137791 original size:26 final size:26
Alignment explanation
Indices: 14137755--14137807 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14137745 CTGGTTCAAT
14137755 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
*
14137781 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14137807 C
1 C
14137808 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:14139082 original size:877 final size:866
Alignment explanation
Indices: 14136246--14139457 Score: 4099
Period size: 869 Copynumber: 3.7 Consensus size: 866
14136236 GTGCTCAGCT
* *
14136246 GGCCAGAAAGACGGGATGCGCAAGGCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * * * *
14136311 CATATATCTGCGTGCCAATGTCATTTTTATGGCATGTAAATTCATACAAAGGTCCCTTAAGCCTT
66 CATATTTCTGCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
14136376 CACGTGAAGTTTCATGGCAAG-CGACCCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * * * * *
14136440 TTCGAGATTTTTTCAAATATTTTTGGGAGGATTTTTGGCCCCAAACCTGGTAGACATGATCCTTG
196 TTCAAGATTTTTTAAAAT-TTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
14136505 TATTTTTTTTGGCATGCACAAAAAAATTTAGCTGAAAACTCGAAGTGTACAAGATTTTGTGACCA
260 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
14136570 TTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCA
325 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
14136635 AATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
390 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
14136700 AAGTACCAGCACCCATCTCACATCATTTGCGCACACCCCCCCGACCCGCCTGATCGTCGGAACCC
455 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGACCC-CCTGATCGTCGGAACCC
* * * * * * *
14136765 CAATGCCGTCGGTCAGGATCTCCAGTGATGCTCTGGTGATGGTGCCCCGGTGAAGAAAAATACGA
519 CAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATATGG
** * * *
14136830 CACCAAAACATGCCCGAGCCTAGCATGTGCTACCGTAACCCTCGGTCTGGTTTGATCTTAGACTG
584 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTTCGATCTTAGACTG
* * *
14136895 GGAATGAAATTCGTATGCCTAAGTCAACGCACGGAACGAGCGTGCGGGCGCTCAGCCGACCAGAG
649 GGAATGAACTCCGTATGCCTAAGTCAAC-CACGGAATGAGCGTGCGGGCGCTCAGCCGACC-GAG
* * * * * * * * ** * *
14136960 GGGCGAGATGTGCAAGCCGGGTATCCGTCGGGTCCCCATCTGTGTCCTGCCAATGTTGCTGCCCC
712 GGGCGAGATG-ACAAGTCGGGGATCAGCCAGGTCCCC-TCTGTGTGCTGCCGATCCTGCTACCAC
* *
14137025 AACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA-
775 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAT
* *
14137089 -ACGAGCGAACGGGCAGGCACTACGTC
840 GACGGGCGGACGGGCAGGCACTACGTC
* * *
14137115 GGCCACAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
14137180 CATATTTCTGGGC-GCCAATGCCATTTTTATGGCTTGTAAATTCATACATTGGTCCCTTAAGCCT
66 CATATTTCT-GCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* *
14137244 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCG
130 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
* * ** * * **
14137309 GTTCAGGATTTTTTTAAATTTTTTCAAAAGGAGTTTTGGTCCCAAACTTTGTAGACGTGGCCCTT
195 GTTCAAGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* *
14137374 GTATTTTTG-TGGCTTGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
259 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
14137438 ATTTGAAAAAAGTGTCCCTATTTC-GAACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCT
324 ATTTGAAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
14137502 GAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGG
388 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* **
14137567 CCAAGTACCAGCACCCA-CTCACATCACATGCGCACACAACCCCCGG-CCCCCTCGATCGTCGGA
453 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC--CCCCCGGACCCCCT-GATCGTCGGA
* ** * ** *
14137630 ACCCTAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGTAAAAT
515 ACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAAT
* * * * *
14137695 GCT-GCACTAGTACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCTGGTTCAATCTTA
580 -ATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTTCGATCTTA
* * ** * * * * * *
14137759 AACTGGGAATGAACTCCGTATG-CTTAG---A-CTGGGAATGAAC-TCCGTATGC-CTAAGTCAA
644 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCACGGAATGAGCGTGCG--GGCGCTCAGCCGA
* * * * *
14137817 CCCA----CGAAACGAGC--GTGCGGGCGCTCAGCCGACCGGGTCCCC-CTTGGTGTGCTGGCGA
707 CCGAGGGGCGAGATGA-CAAGT-CGGG-GATCAGCC-A---GGTCCCCTC-T-GTGTGCTGCCGA
** * **
14137875 TCCTGCTACCGTAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
763 TCCTGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
14137940 CAACCGATGAAATGAACGGACGGACGGACGGAACGGCAATACGTC
828 CAACCGA-CAAATG-ACGGGCGGAC-G--GGCA-GGCACTACGTC
* * * *
14137985 GGCCAGAGAGACTGGATGCGTAAGCCATGGATCGATAGGGTGGAAGGTGGGTTTAGGCACATCTT
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
14138050 CATATTTCTTCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 CATATTTCTGCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * *
14138115 CACGTGAAGTTTCATAGCAAGACGACTCATTTTCTATTTTTCAC-AATTTTAGAAAATTTTTACG
131 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTA-AAACTTTTTACG
*
14138179 GTTCAAGATTTTTTAAAATTTTTTTGGAAGGGGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
195 GTTCAAGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * ** * *
14138244 GTATTTTTGTTAGCATGTACAAAGCAATTCAGGTAAAAACTCAAAGTGTACAAGATTTTGTGACC
259 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
14138309 ATTTGAAAAAAGTGCCCCCA-TTCTAGACACTTTAATGGCTAATGGCAGCAAACCTGTAAAATCT
324 ATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
*
14138373 CAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGG
388 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* *
14138437 CCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCAG-CCCCCT-ATCGTCGGAACC
453 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGACCCCCTGATCGTCGGAACC
* * * *
14138500 CCAATGCCGTCGGTCAAGTTCTCCGGTGATGCTCCGGCGATGGTGCCCGGGTAAAGAAAAATATG
518 CCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATATG
* * * * * * ** *
14138565 GTACCAGCACATGCTCGGGCCCAGTATGTACTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACT
583 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTTCGATCTTAGACT
*
14138630 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGACCTGA
648 GGGAATGAACTCCGTATGCCTAAGTCAA-CCACGGAATGAGCGTGCGGGCGCTCAGCCGACC-GA
* * **
14138695 GGGGCGGGATGCACAAGTCGGGGATCAGCCAAGTCCGCCTCTGCATGCTGCCGATCCTGCTACCA
711 GGGGCGAGATG-ACAAGTCGGGGATCAGCCAGGTCC-CCTCTGTGTGCTGCCGATCCTGCTACCA
* * * *
14138760 CAACCCTTGGTCTGGTCTGATATTAGACTGGGAATGAACTCCGTATCCCTAAGCCAACCGACAAA
774 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AA
* *
14138825 ATGAGCGGGCGGGCGGGCAGGCACTACGCC
838 ATGA-CGGGCGGACGGGCAGGCACTACGTC
* *
14138855 GACCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTGGGTGGTAGGTGGGTTTAGGC
1 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA-------GGGTGGTAGGTGGGTTTAGGC
*
14138920 ACATCTTCATATTTCTGCCTGCCAATGCCATTTTCATGGCTTGTAAATTCATACAATGGTCCCTT
59 ACATCTTCATATTTCTGCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* * * *
14138985 AAGCCTTTACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTT
124 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTT
* ** * *
14139050 TTTATGGTTCGGGATTTTTTAAAAATTTTTTGGAAGGATTTTTGGCCTCAAACTTGGTAGACGTG
189 TTTACGGTTCAAGATTTTTT-AAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
14139115 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCGAAGAGTACAAGATTTT
253 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
14139180 GTGACCATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGCAA
318 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* *
14139245 AATCTCAAATGCTCTTTAAAGGGTTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
383 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * *
14139310 ACGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCG-CT
448 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGACCCCCTGATCGTC-
* * *
14139373 GGAACCCCAATACCGCCGGTCAGGTTCTCCGTTGATGCTCCGGCAATGGTGCCCCGGTGAAGAAA
512 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAA
*
14139438 AATGTGGCACCAGCACATGC
577 AATATGGCACCAGCACATGC
14139458 TTGGTTTGGT
Statistics
Matches: 2010, Mismatches: 265, Indels: 126
0.84 0.11 0.05
Matches are distributed among these distances:
856 1 0.00
857 4 0.00
858 10 0.00
860 1 0.00
861 1 0.00
862 83 0.04
863 18 0.01
864 2 0.00
865 1 0.00
866 8 0.00
867 133 0.07
868 29 0.01
869 488 0.24
870 447 0.22
871 140 0.07
872 3 0.00
873 18 0.01
874 92 0.05
875 3 0.00
876 1 0.00
877 321 0.16
878 119 0.06
879 85 0.04
880 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (866 bp):
GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
CATATTTCTGCCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
TTCAAGATTTTTTAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGACCCCCTGATCGTCGGAACCCCA
ATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATATGGCA
CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTTCGATCTTAGACTGGG
AATGAACTCCGTATGCCTAAGTCAACCACGGAATGAGCGTGCGGGCGCTCAGCCGACCGAGGGGC
GAGATGACAAGTCGGGGATCAGCCAGGTCCCCTCTGTGTGCTGCCGATCCTGCTACCACAACCCT
CGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAATGACGGG
CGGACGGGCAGGCACTACGTC
Found at i:14142834 original size:868 final size:868
Alignment explanation
Indices: 14140159--14146594 Score: 6223
Period size: 868 Copynumber: 7.4 Consensus size: 868
14140149 GCCTAGCATA
* *
14140159 TGCTGCCGCAACCCTTGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** *
14140224 CCGACGAAACGAGTGAGCGGGCGGGCGGGCAGGCACTACTCAAGCCAGAGAGACGGGATACGCAA
66 CCGACGAAACGAGCGA-CGGGC-GGCGGGCACGCACTACGCTGGCCAGAGAGACGGGATGCGCAA
* * * *
14140289 GCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGTCACATCTTCATATTTCTACATGCCAATGTCA
129 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * * *
14140354 TTTTTATGACTTGTAAATTTATACAACGGTCCATTAAGCCTTCTCGTGAAGTTTCATGGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
14140419 GACTCGTTTTCTATTTTTCACGATTTTCT-AAACTTTTTACGGTTCGGGATTTTTTAAAATATTT
259 GACTCGTTTTCTATTTTTCACGATTTT-TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* ** **
14140483 TCGGAAGGAGTTTTGG-CCCAAACTTAGTAGATTTGATCCTTGTATTTTTGTTGGCATGCGTAAA
323 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
14140547 AAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
388 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
14140612 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAATATCTCAAATGCTCTCTAAGGGGGTGTGA
453 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
14140677 GTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACA
518 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
14140742 TCA--TGTGCGCACTCCCCCCTGACCCCCCGATCGTCGGAACCCCAATGCCACTGGTCAGGTTCT
583 TCATGTGTGCACACCCCCCCCGGA-CCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCT
* * * *
14140805 CCGACGATGCT-C--C------G----G-TGAAGAAAAATGTGGCCCCAGCACATGCCCCAGCCC
647 CCG-CGATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCT
14140856 AGCATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCCTAAACTGGGAATGAACTTCGTATGCTTA
711 AGCATGTGCTGCCGCAA-CC-C--TC--G---G-T-C----C--GG--T---C--CG-AT-CTTA
* * * * *
14140921 GACTGAGAATGAACTCCG-TATGCCTAAATCAACCCACGGAACGAGCGTGC-GATCGTTCAGCCG
750 GACTGGGAATGAACTCCGTTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGT-GCTCAGCCG
* * * *
14140984 GCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGATCGGGTCACCCTCTGTGTCCCACCGATCC
814 GCCAGAGGGGCGAGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTCTG-----CCG---C
* * * ** * * *
14141047 TGCTGCCACAACCCTCAGTCTGGCCCGATCTTAGACTGGGAATGAACTCTGTTTGCCTAAGCC-A
1 TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* **
14141111 CCTGACGAAACGAACGGGTGGGTAGGCGGGCGGGCGA-GCACTACGTCT-GCCAGAGAGACGGGA
66 CC-GACGAAACG-A-GCG-ACG--GGC-GGCGGGC-ACGCACTACG-CTGGCCAGAGAGACGGGA
* * * **
14141174 TTCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCAGTGTGCC
122 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* * * *
14141239 AATGCCATTTTTATGGCTTGTAAATTCGTGCAATGGTCCCTTAAGCCTTCATGTGAAGTTTAATG
187 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
*
14141304 GCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
252 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * *
14141369 ATCTTTTCGGAAGGATTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTATGTTGGCATG
317 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
14141434 CACAAAAAGATTCAGCTAAAAACTCGAGGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
382 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* ** * * *
14141499 CCATTTTAGACACTTTAATAACTACTGGCAGCAAACCTATAAAATCTCAAATTCACTTTAAGGGG
447 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * *
14141564 GTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCTAAGTACCACCACCCAT
512 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
14141629 CGCACATCATGTGTGCACACCCCCCTCGGCCCCCCCGATCGTCGAAACCCCAATGCCACCGGTCA
577 CGCACATCATGTGTGCACACCCCCCCCGG-ACCCCCGATCGTCGAAACCCCAATGCCGCCGGTCA
* * * * * *
14141694 GGTTCT-C-CG--G-T-----GATGGTACCCCGGTGAAGAAAATTACAGCACCAGCACATGCCCG
641 GGTTCTCCGCGATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * *
14141749 AGCCTAGCATGTGCTGACGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACACTG-TA
706 AGCCTAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTTA
* ** * * * * *
14141813 TGCCTTAGTCAACCCGTGAAACGAGCGTGCGTGCGCTCAGCCGGCCTGAGGGGCGGGATGCGTAA
771 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAA
* * **
14141878 GTCGGGGATCAGCCAAGTCCGCCTCTGCGTGCTGCCGATCC
836 GTCGGGGATCGGTCGGGTCC-CC-CT-C-T-CTGCCG---C
* * * * ** *
14141919 TGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGGTTGGGAATGAACTCCGTATGCCTAAGCTAA
1 TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14141984 CCGACGAAACGAGTCGACGGGCAGGTGGGCACGCACTATGTTGGCCAGAGAGACGGGATGCGCAA
66 CCGACGAAACGAG-CGACGGGC-GGCGGGCACGCACTACGCTGGCCAGAGAGACGGGATGCGCAA
* * ** *
14142049 GCCATGGATAGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAAAGCCA
129 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14142114 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14142179 GACTCATTTTCTACTTTTCACGATTTTCGAAACTTTTTACGGTTTGGGATGTTTTT-AAATTTTT
259 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT-TTTTTAAAATTTTT
* ** * *
14142243 TCGGAAGGAGTTTTGGCCCCAAGCTTTTTAGACGTTATCCTTGTATTTTTGTTGGCATGCAAAAA
323 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
14142308 AAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
388 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
14142373 CAAACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGA
453 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
14142438 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
518 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
14142503 TCATGTGAGCACACCCCCCACCCGGACCCCCGATCGTCGAAACCCCAATGCCGTCGGTTAGGTTT
583 TCATGTGTGCACA-CCCCC-CCCGGACCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTC
* * * *
14142568 TTCGACGATGGTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCGATCC
646 TCCG-CGATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* *
14142633 TAGCATGTGTTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT-CGTTATGCC
710 TAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTTATGCC
* * *
14142697 TAAGTCAACTCACGAAACGCGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGAGATGCGCAAGTCG
775 TAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCG
14142762 GGGATCGGTCGGGT-CCCC-CTCTG-CG-
840 GGGATCGGTCGGGTCCCCCTCTCTGCCGC
* * * * **
14142787 TGCTGCCGCAACCCTCGGTCCGGTCAGATCTTAGACTGCGAATGAACTCCATATGCCTAATTCAA
1 TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * * * *
14142852 TCGACGAAACGAGCGGGCGGGCGAGCGGGCGGGCAATACACCGGTCAGAGAGAAGGGATGCGCAA
66 CCGACGAAACGAGC-GACGGGCG-GCGGGCACGCACTACGCTGGCCAGAGAGACGGGATGCGCAA
* * *
14142917 GCCGTGGATCGATAGGGTGGAAGGTGGGTTTAGGCACATCTTCATATTTCTGCACGCCAATGCCT
129 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14142982 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14143047 GACTCATTTTTTATTTTTCAC-AATTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
259 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
*
14143111 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
324 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
14143176 CAATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCA-TTC
389 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14143240 TAGACACTTTAATGGCTAATGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
454 -AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14143305 GTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCAT--CACA
518 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
14143368 -CATGATGTGCACACACCCCCC-GACCCCCTTATC-ACTAGAACCGCAATGCCGTCGGTCAGGTT
583 TCATG-TGTGCACACCCCCCCCGGACCCCC-GATCGTCGA-AACCCCAATGCCGCCGGTCAGGTT
* * * * * * *
14143430 CTCCGGTGATGCTCCGACGATGGCGCCTCGACGAAGAAAAATACGGCACCAGCAAATGCCTGAGC
645 CTCC-GCGATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* *
14143495 CTAGCATGTGCTACCGTAA-CC-C--T-CGGTCCGATCTTAGACTGGGAATGAACTCCG-TATGC
709 CTAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTTATGC
* * * * * *
14143554 CTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGACCAGA-GGGCGGGATGAGCAAGTC
774 CTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTC
** *
14143618 GGGGATCGACCGTGTCCCCCTATGCGTGCTGCCGATCC
839 GGGGATCGGTCGGGTCCCCC--T-C-T-CTGCCG---C
* * *
14143656 TGCTGCCGTAACCCTCGATCCGATCTGATCTTAGACTGGGAATGAACTCCTTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14143721 CCGAAGAAACGAGCATACGGGTGGGCGGCCGGGTGAGCGGGCACTACGCCGGCCAGAGAGACGGG
66 CCGACGAAACGAGC-GAC----GGGCGG-CGGG-CA-C--GCACTACGCTGGCCAGAGAGACGGG
* * *
14143786 ATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGC
121 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* *
14143851 TAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCAT
186 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * *
14143916 GCCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAATTTTTTACGGTTCGAGATTTTTTAA
251 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* *
14143981 AATTTTCTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
316 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
14144046 GCACAAAAGAATTCAGCCAAAAACTCGTAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
381 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
14144111 CCCATTTCAAACACTTTAATGGCTAATGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
446 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
14144176 GGTGTGTGTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAGCAGCACCCA
511 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * ** **
14144241 TTGCACATCATGTGCGCACAACCCCCCCGACGATGGTGCCCCGAT-GAAGAAA----AATGCAAC
576 TCGCACATCATGTGTGCAC-ACCCCCCC--C---GGACCCCCGATCGTCGAAACCCCAATGC--C
* * ** * * ***** *
14144301 ACCAG-CA-CAT-GCC-CGA-GC-CCAGC-ATGTGCTGCCTC-A--AACCTTGATCCGGTCTGAT
633 GCCGGTCAGGTTCTCCGCGATGCTCCGGCGATG-G-TGCCTCGATGAAGAAAAATGCGG-C--A-
* * * * * * * ** * * *
14144356 CTTAG-AC-TG--GGAATGAACT-CCATTTGCTTAGACTGGGAATGAACTCTGT-CTG-CCTAAG
692 C-CAGCACATGCCCG-A-G-CCTAGCATGTGC-T-G-C-CGCAA--CCCTCGGTCCGGTCC-GA-
* ** * * * * * * *** * *
14144414 TC-AACCCAT-GAAACGAGCATGCGTT-CG-CTCAGT-TGGCCA-G-AA-G-G-GTG-GGATGCG
745 TCTTAGAC-TGGGAATGAAC-TCCGTTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCT
* * ** * * ** * ** **
14144468 CATGTCGG--GGATCAGTCG-GGTGC-C-CCTC--TG--C-GT---G--CTGC-CGAT--C-C
808 CA-GCCGGCCAGA-GGGGCGAGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTCTGCCGC
* ** * * *
14144512 TGCTACCGCAACCCTCCATCCGATCTGATCTTAGACTGGTAATGAACTCTGTATGCCTAAGCCGA
1 TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14144577 TCGATGAAATGAGCGAGCGGGCGGACGGGCGA-GTACTACGCCGGCCAGAGAGACGGGATGCGCA
66 CCGACGAAACGAGCGA-CGGGCGG-CGGGC-ACGCACTACGCTGGCCAGAGAGACGGGATGCGCA
*
14144641 AGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTCTGCATGCCAATGC
128 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCTGCATGCCAATGC
* * *
14144706 CATTTTTATGGCTTTTAAATTCGTACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
192 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * *
14144771 ACGACTTGTTTTCTCTTTTTCACGATTTTT-AAA------A-----C-----TTTTCAAAATTTT
257 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * * *
14144819 TTCGGAAGGGGTTTTGGCCCCTAACTTGCTAAACGTGATCCTTGTATTTTTGTTGGCATGCACAA
322 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *** * *
14144884 AAACATTCAGCTTGGAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCTATT
387 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
14144949 TCAGACACTTTGATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
452 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14145014 AGTTCTTGAGGTTTGAAGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCAT
517 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
14145079 ATCATGTGTGCACA-CCACCCCTGA---CCG--C--CGAAACCCTAATGCCGCCGGTCAGGTTCT
582 ATCATGTGTGCACACCCCCCCCGGACCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCT
* * * * * *
14145136 CCGGCGATGCTCCGGTGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGGACATGCTCGAGCCT
647 CC-GCGATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCT
* *
14145201 AGCATGTGCTACCGTAACCCTCGGTCCGATCGGATCTTAGACTAGGAATAAACTCCATATGCTTA
711 AGCATGTGCTGCCGCAACCCTCGGT-C---CGG-TC-----C---G------------AT-CTTA
* * * *
14145266 GACTAGGAATGAACTCCG-TATGCCTAAGTCAACCCACGAAACGAGCTTACGGGTGCTCAGTCGG
750 GACTGGGAATGAACTCCGTTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGG
* * *
14145330 CCAGAGGGACGAGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTTTGCGTGCTGCCGATCC
815 CCAGAGGGGCGAGATGCGCAAGTCGGGGATCGGTCGGGTCCCCC--T-C-T-CTGCCG---C
* * * * *
14145392 TGCTGCCGTAACCCTCGATCTGATCCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14145457 CCGACG-AA--A-CGA------G-TGG---GCACTACTCTGGCCAGCGAGACGGGATGCGCAAGC
66 CCGACGAAACGAGCGACGGGCGGCGGGCACGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGC
* * * *
14145508 CGTCGATCGATAGGGTGGTAGGTTGGTTTAGGCACATATT-ATTATTTCTGCGTGCCAATGCCAT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA-TATTTCTGCATGCCAATGCCAT
* *
14145572 TTTTATGGCTTGTAAATTCATACAATGG-CCCTTAAGCCTTCACGCGAAATTTCATGGCAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
14145636 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTC
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* ** * * *
14145701 AGG-AGGATTTTTGGCCCCAAACTTGGTAGATATGATCCTTCTATTTTTTTTTTGGCATGCTCAA
325 -GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--TTTTTGTTGGCATGCACAA
14145765 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
387 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* **
14145830 TCAGACACTTTAATGGCTACTGGCTGCAAACCTGTAAAATCTCAAATGCTCTTTAAAAGGGTGTG
452 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * **
14145895 AGTTCTCGAGGTTTGATGAGGAATAGGGGGCCAAAATAAGGGCCAAGTACCAGCACCCATCATAC
517 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* **
14145960 ATCATGTGTGCACACCCCCCCC-GACGCCCCCGATCGTCGGAACCCCAATGCCGCCCATCAGGTT
582 ATCATGTGTGCACACCCCCCCCGGA--CCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTT
* * * *
14146024 CT-C-CG--G-T-----GATAGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCC
645 CTCCGCGATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * *
14146079 CAGCATGTGCTGTCGCAACCCTCGGTCCAGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTT
710 TAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT-C-----C--
* * * * *
14146144 AGATTGGGAATGAACTCCGTATGCCTAAGTCAACCTATGAAATGAGCGTGCGGGCGCTCAGTCGG
767 -----------G---T---TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGG
* * * * *
14146209 CTAGAGGGGCGGGATGC-CTAAGTTGGGGATCCGTCGGGTCCCCCTCTACGTGCTGCC
815 CCAGAGGGGCGAGATGCGC-AAGTCGGGGATCGGTCGGGTCCCCCTCT-C-TGCCG-C
* * * * ** *
14146266 AATCCCACTGCTGCAACCCTCGGTCCGATGTAATCTTAGACTGGGAATGAACTATGCATGCCTAA
1 --T---GCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *
14146331 GCCAACCGACGAAACGAGCGAGTGGGTGGATGGGCGA-GCACTACGCTGGCCAGAGAGACGGGAT
61 GCCAACCGACGAAACGAGCGA-CGGGCGG-CGGGC-ACGCACTACGCTGGCCAGAGAGACGGGAT
* **
14146395 GCGCAAGTCGTGGATCGATAGGGTGGTTTGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
123 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
*
14146460 ATGCCATTTTTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
188 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * * *
14146525 CAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTTCGGTTTGGGATTTTTTAAAC
253 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
14146590 TTTTT
318 TTTTT
14146595 CGTTTTCTAT
Statistics
Matches: 4624, Mismatches: 631, Indels: 578
0.79 0.11 0.10
Matches are distributed among these distances:
819 4 0.00
821 9 0.00
822 5 0.00
823 9 0.00
824 3 0.00
825 3 0.00
826 11 0.00
827 17 0.00
828 7 0.00
829 5 0.00
830 11 0.00
831 1 0.00
832 260 0.06
833 1 0.00
837 1 0.00
842 1 0.00
846 2 0.00
847 7 0.00
848 91 0.02
849 104 0.02
850 1 0.00
851 2 0.00
852 12 0.00
853 18 0.00
854 9 0.00
855 11 0.00
856 77 0.02
857 29 0.01
858 77 0.02
859 4 0.00
860 2 0.00
861 1 0.00
862 73 0.02
863 148 0.03
864 82 0.02
865 13 0.00
866 10 0.00
867 273 0.06
868 702 0.15
869 119 0.03
870 8 0.00
871 2 0.00
872 161 0.03
873 19 0.00
874 20 0.00
875 12 0.00
876 19 0.00
877 190 0.04
878 289 0.06
879 260 0.06
880 248 0.05
881 242 0.05
882 10 0.00
883 8 0.00
884 4 0.00
885 5 0.00
886 12 0.00
887 28 0.01
888 71 0.02
889 5 0.00
890 30 0.01
891 1 0.00
892 231 0.05
893 224 0.05
894 3 0.00
895 167 0.04
896 92 0.02
897 3 0.00
898 45 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (868 bp):
TGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGACGGGCGGCGGGCACGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGTGCACACCCCCCCCGGACCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGC
GATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCAT
GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTTATGCCTAAGTC
AACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCGGGGATC
GGTCGGGTCCCCCTCTCTGCCGC
Found at i:14142878 original size:12 final size:12
Alignment explanation
Indices: 14142861--14142885 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
14142851 ATCGACGAAA
14142861 CGAGCGGGCGGG
1 CGAGCGGGCGGG
14142873 CGAGCGGGCGGG
1 CGAGCGGGCGGG
14142885 C
1 C
14142886 AATACACCGG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.08, C:0.28, G:0.64, T:0.00
Consensus pattern (12 bp):
CGAGCGGGCGGG
Found at i:14145272 original size:26 final size:26
Alignment explanation
Indices: 14145236--14145288 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14145226 CCGATCGGAT
14145236 CTTAGACTAGGAATAAACTCCATATG
1 CTTAGACTAGGAATAAACTCCATATG
* *
14145262 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATAAACTCCATATG
14145288 C
1 C
14145289 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.34, C:0.21, G:0.19, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATAAACTCCATATG
Found at i:14146144 original size:26 final size:26
Alignment explanation
Indices: 14146115--14146167 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14146105 CCAGTCCGAT
14146115 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
14146141 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
14146167 C
1 C
14146168 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCGTATG
Found at i:14147870 original size:693 final size:699
Alignment explanation
Indices: 14146986--14148303 Score: 2098
Period size: 693 Copynumber: 1.9 Consensus size: 699
14146976 GTAACCCTCC
* *
14146986 ATCCGGTCTGATCTTAGACTAGTAATGAACTCCGTATGCCTAAGCCGATCGACGAAACGAGTGAA
1 ATCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCGAAC-ACG-AACGA--GAA
* * *
14147051 CGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
62 CGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGT
* * *
14147116 AGGTGGGTTTAGGAACATCTTCATATTTTTACGTGCCAATGCCATTTTTATGGCATGTAAATTCA
127 AGGTGGGTTTAGGAACATCTTCATATTTCTACATGCCAATGCCATTTTTAAGGCATGTAAATTCA
*
14147181 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAC
192 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACACGTTTTCTATTTTTCAC
* **
14147246 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAT-TTTTTCAGAAGGAGTTTTGGCCCCA
257 GATTTTTGAAACTTTTTACGATTCGGGATTTTTTAAAATATTTTTCAGAAGGAGTTTTGGCAACA
* * * * * *
14147310 AACTTGGTAGACATGATCCTTGTAATTTTT-TTGGCATGCGCAAAACAATTCCGCTAAAAGCTCG
322 AACTCGGTAGACATGATCCTTG-AATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTAG
*
14147374 AAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
386 AAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACT
* * *
14147439 GGTAGCAAACCTGTAAAATCTCAAATG-CTTTCAAGGGGTGTGAGTTCTT-GAGGTTTGATGAGG
451 GGCAGCAAACCTGTAAAATCTCAAATGCCTTTAAAGGAGTGTGAGTT-TTCGAGGTTTGATGAGG
14147502 GATAGGGGGCCAATATAAAGG-CCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCC
515 GATAGGGGGCCAATAT-AAGGACCAAGTACCAGCACCCATCGCACATCATGTGCACACA-CCCCC
* * * *
14147566 CAG-CCCCGCGATCGTCGAAACCCCAATGCCGTCTGTCAGGTTATCCGGTGATGGTGCCCCGATA
578 CAGCCCCCCCAATCGTCGAAACCCCAATGCCGCCGGTCAGGTTATCCGGTGATGGTGCCCCGATA
14147630 AAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGTTGTCGCACCCTTCG
643 AAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGTTGTCGCACCCTTCG
*
14147687 ATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC-AAC-CG-ACGA-AACGAG
1 ATCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCGAACACGAACGAGAACGAG
14147748 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
66 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* *
14147813 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTAAGGCTTGTAAATTCATACA
131 GGGTTTAGGAACATCTTCATATTTCTACATGCCAATGCCATTTTTAAGGCATGTAAATTCATACA
* * * *
14147878 ATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACACGTTTTCTATTTTTCATGATT
196 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACACGTTTTCTATTTTTCACGATT
* *
14147943 TTTGAAACTTTTTACGATTTGGGATTTTTTAAAATATTTTTCGGAAGGAGTTTTGGCAACAAACT
261 TTTGAAACTTTTTACGATTCGGGATTTTTTAAAATATTTTTCAGAAGGAGTTTTGGCAACAAACT
* * *
14148008 CGGTAGACGTGGTCCTTGCATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTAGAAGTG
326 CGGTAGACATGATCCTTGAATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTAGAAGTG
*
14148073 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAG
391 TACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAG
14148138 CAAACCTGTAAAATCTCAAATGCTCTTTAAAGGAGTGTGAGTTTTCGAGGTTTGATGAGGGATAG
456 CAAACCTGTAAAATCTCAAATGC-CTTTAAAGGAGTGTGAGTTTTCGAGGTTTGATGAGGGATAG
* *
14148203 GGGGCCAATATAAGGACCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC
520 GGGGCCAATATAAGGACCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCAGCCCC
* *
14148268 CCCAATCGTCGGAACCCCAATGTCGCCGGTCAGGTT
585 CCCAATCGTCGAAACCCCAATGCCGCCGGTCAGGTT
14148304 CTCCAACGAT
Statistics
Matches: 567, Mismatches: 43, Indels: 19
0.90 0.07 0.03
Matches are distributed among these distances:
693 227 0.40
694 159 0.28
695 13 0.02
696 120 0.21
698 2 0.00
700 2 0.00
701 44 0.08
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (699 bp):
ATCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCGAACACGAACGAGAACGAG
CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
GGGTTTAGGAACATCTTCATATTTCTACATGCCAATGCCATTTTTAAGGCATGTAAATTCATACA
ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACACGTTTTCTATTTTTCACGATT
TTTGAAACTTTTTACGATTCGGGATTTTTTAAAATATTTTTCAGAAGGAGTTTTGGCAACAAACT
CGGTAGACATGATCCTTGAATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTAGAAGTG
TACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAG
CAAACCTGTAAAATCTCAAATGCCTTTAAAGGAGTGTGAGTTTTCGAGGTTTGATGAGGGATAGG
GGGCCAATATAAGGACCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCAGCCCCC
CCAATCGTCGAAACCCCAATGCCGCCGGTCAGGTTATCCGGTGATGGTGCCCCGATAAAGAAAAA
TGTGGCACCAGCACATGCTCGAGCCCAGCATGTGTTGTCGCACCCTTCG
Found at i:14148435 original size:26 final size:26
Alignment explanation
Indices: 14148406--14148458 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14148396 CCGATCCGAT
* *
14148406 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14148432 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14148458 C
1 C
14148459 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:14149349 original size:26 final size:26
Alignment explanation
Indices: 14149311--14149363 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14149301 CTGATCTGAT
14149311 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
14149337 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14149363 C
1 C
14149364 CCAGGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14149843 original size:902 final size:893
Alignment explanation
Indices: 14147679--14150283 Score: 3597
Period size: 902 Copynumber: 2.9 Consensus size: 893
14147669 GTGTTGTCGC
*
14147679 ACCCTTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A
1 ACCC-TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*
14147742 A--A-C-G-A-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGAT
65 AGCAGCGGCAGGCGGGCGGGCGCTACGCCGGCCAGAGAGAC-GGATGCGCAAGCCATGGATCGAT
* *
14147801 AGGGTGGTAGGTGGGTTTAGGCA-CATCTTCATATTTCTACATGCCAATGCCATTTTTAAGGCTT
129 AGGGTGGTAGGTGGGTTTAGG-AGCATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
*
14147865 GTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACACGTTTTCT
193 GTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* *
14147930 ATTTTTCATGATTTTTGAAACTTTTTACGATTTGGGATTTTTTAAAATATTTTTCGGAAGGAGTT
258 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAT-TTTTTCGGAAGGAGTT
* * * *
14147995 TTGGCAACAAACTCGGTAGACGTGGTCCTTGCATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
322 TTGGCAACAAACT-TGTAAACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
14148060 AAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAA
386 AAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAA
*
14148125 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGAGTGTGAGTT-TTCGAGGT
451 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTT-GAGGT
*
14148189 TTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACCAGCACCCATCGCACATCATGTGCGCA
514 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* *
14148254 CACCCCCCGGCCCCCCCAATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCAACGATGCTCC
579 CACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATG-C-CC-GTCAGGTTCTCCAACGATGCTCC
* * * * *
14148319 GGCGATGGTGCCCCGACGAAGAAATATACAGCACCAGCAAACGCCCGAGCTCAGCACA-TGCTAT
641 GGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA-AGTGCTA-
* * * * *
14148383 CAG-AACCCTCGGTCCGATCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGAGAATG
704 CCGCAACCCTCGGTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * ** *
14148447 AACTCCGTATGCCTAAGTCAACCTATGAAACGAGCGTGCGAGCACTCAGTCGGCCAGAGGGGTGG
769 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAACCGACCAGAGGGGTGG
** * * * *
14148512 GATGCCTAAGTTGGGGATCAGTCGAGTCCCCCTCTACCTGCTGCCAATCCCGCTGTGGCA
834 GATGCCTAAGCCGAGGATCAGCCGAGTCCCCCTCTACCTGCTGCCAATCCCACTCTGGCA
* * * * * *
14148572 ACCCTCGGTCCAGTGTGATCTTAGACTAGGAATGAACTACATATGCCTAAGCCAACCGATGAAAC
1 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA-
* ** *
14148637 AAGCCAGCGAGCGGGCGGGCGGGCAGACACTACGCCGGCCCTAGAGACGGTATGCGCAAACCATG
64 AAG-CAGCG-GCAGGCGGGCGGGC-G---CTACGCCGGCCAGAGAGACGG-ATGCGCAAGCCATG
* * *
14148702 GATCGATAGGCTGGTAGGTGGGTTTAGGCAG-ATCTTCATATTTCTGCATGCCAATACCTTTTTT
122 GATCGATAGGGTGGTAGGTGGGTTTAGG-AGCATCTTCATATTTCTGCATGCCAATGCCATTTTT
*
14148766 ATGGCTTCTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
186 ATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * *
14148831 ATTTTCTATTTTTCATAATTTTTGAAACTTTTTAGGGTTCGGGATTTTTTAAAATTTTTTCGGAA
251 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA
* * * *
14148896 GGAGTTTTGGCAACAAACTTGGAAGACATGATCCTTGTCTTTTTGTCGGCATGCACAAAAAAATT
316 GGAGTTTTGGCAACAAACTTGTAA-ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
*
14148961 CAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
380 CAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACA
*
14149026 CTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTTG
445 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTTG
*
14149091 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTG
510 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
14149156 CGCACACCCCCCGG-CCCCCCGATCGTCGAAACCCCAATGCCACCGATCAGGTTCTCCAACGATG
575 CGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATG-C-CCG-TCAGGTTCTCCAACGATG
* *
14149220 CTCCGGTGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAGTGC
637 CTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAGTGC
* *
14149285 TACCGCAACCCTCGGTCTGATCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGGCTGGGAA
702 TACCGCAACCCTCGGTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * * **
14149350 TGAACTCCGTATGCCCAGGTCAACCCACGAAACGAGCGTGTGGGTGCTCAACCGACCAGAGGGGT
767 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAACCGACCAGAGGGGT
* * * * * *
14149415 GGGATGCGTAAGCCGAGGATCGGCCG-GCTCCCCCTCTACGTGCTGTCGATCCTACTACT-GCA
832 GGGATGCCTAAGCCGAGGATCAGCCGAG-TCCCCCTCTACCTGCTGCCAATCCCACT-CTGGCA
* *
14149477 ACCCTCGGTTCGGTCTGAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAA
1 ACCCTCGGTCCGGTCTG-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* **
14149542 TGAGCAGGCGGGCAGGCGGGCGGGCGCTACACCGGTAAGAGAGACTGGATGCGCAAGCCATGGAT
65 --AGCA-GC-GGCAGGCGGGCGGGCGCTACGCCGGCCAGAGAGAC-GGATGCGCAAGCCATGGAT
*
14149607 CGATAGGGTGGTAGGTGGGTTTAGGTGCATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
125 CGATAGGGTGGTAGGTGGGTTTAGGAGCATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* *
14149672 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
190 CTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * *
14149737 TCTATTTTTCACGATTTTTGAAACATTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGG-G
255 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* ** * *
14149801 CTTTTAGCCCCTAACTTGCTAAACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAG
320 -TTTTGGCAACAAACTTG-TAAACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* *
14149866 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCATTCCAGACACTT
383 CTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTT
* * *
14149931 TAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAACGGGGTGTAAGTTCTCGAG
448 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAG
* *
14149996 GTTTGATGAGGGAT-GGGAGGCCAATATAAGGGCCAAGTACCAGCATCCATCGCACATCATATGC
512 GTTTGATGAGGGATAGGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
14150060 GCATACCCCCCCTCGGCCCCCCCGATCATCGAAACCCCAATG-TCGTC-GG---T-CAA-G-TTC
576 GC--ACACCCCC-CGGCCCCCCCGATCGTCGAAACCCCAATGCCCGTCAGGTTCTCCAACGATGC
* * * * * *
14150117 TCCGACGATAGTGCCCCGACGAAGAAAAATACGGCACAAGCACATGCCTGAGCCCAGCATGCGCT
638 TCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAGTGCT
** * * *
14150182 GTCGCAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTTCGTATGCATAGACTGGGAAT
703 ACCGCAACCCTCGGTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * *
14150247 GAACTACGTATGCCTAAGCCAACCGACGAAACGAGCG
768 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
14150284 GGCGGGCAGG
Statistics
Matches: 1522, Mismatches: 150, Indels: 77
0.87 0.09 0.04
Matches are distributed among these distances:
892 50 0.03
893 4 0.00
896 151 0.10
897 1 0.00
898 3 0.00
899 2 0.00
900 1 0.00
901 2 0.00
902 371 0.24
903 81 0.05
904 18 0.01
905 281 0.18
906 153 0.10
907 203 0.13
908 201 0.13
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.25
Consensus pattern (893 bp):
ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAA
GCAGCGGCAGGCGGGCGGGCGCTACGCCGGCCAGAGAGACGGATGCGCAAGCCATGGATCGATAG
GGTGGTAGGTGGGTTTAGGAGCATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
AATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
CAACAAACTTGTAAACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
TAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCT
ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTTGAGGTTTGATGA
GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
CGGCCCCCCCGATCGTCGAAACCCCAATGCCCGTCAGGTTCTCCAACGATGCTCCGGCGATGGTG
CCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAGTGCTACCGCAACCCTCG
GTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
CTAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAACCGACCAGAGGGGTGGGATGCCTAAGCC
GAGGATCAGCCGAGTCCCCCTCTACCTGCTGCCAATCCCACTCTGGCA
Found at i:14150245 original size:26 final size:26
Alignment explanation
Indices: 14150209--14150259 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14150199 GGTCCGATCT
*
14150209 TAGACTAGGAATGAACTTCGTATGCA
1 TAGACTAGGAATGAACTACGTATGCA
*
14150235 TAGACTGGGAATGAACTACGTATGC
1 TAGACTAGGAATGAACTACGTATGC
14150260 CTAAGCCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.33, C:0.16, G:0.25, T:0.25
Consensus pattern (26 bp):
TAGACTAGGAATGAACTACGTATGCA
Found at i:14151888 original size:26 final size:26
Alignment explanation
Indices: 14151850--14151902 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14151840 CTGATCCAAT
*
14151850 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14151876 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14151902 C
1 C
14151903 CTAAGACAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14151918 original size:27 final size:26
Alignment explanation
Indices: 14151861--14151919 Score: 64
Period size: 26 Copynumber: 2.2 Consensus size: 26
14151851 TTAGACTGGG
* * **
14151861 AATGAACTCCGTATGCTTAGACTAGG
1 AATGAACTCCGTATGCTAAGACAACC
14151887 AATGAACTCCGTATGCCTAAGACAACC
1 AATGAACTCCGTATG-CTAAGACAACC
*
14151914 CATGAA
1 AATGAA
14151920 ACGAGCATGC
Statistics
Matches: 27, Mismatches: 5, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
26 15 0.56
27 12 0.44
ACGTcount: A:0.36, C:0.24, G:0.19, T:0.22
Consensus pattern (26 bp):
AATGAACTCCGTATGCTAAGACAACC
Found at i:14152383 original size:900 final size:898
Alignment explanation
Indices: 14150235--14152984 Score: 3667
Period size: 902 Copynumber: 3.1 Consensus size: 898
14150225 TTCGTATGCA
*
14150235 TAGACTGGGAATGAACTACGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG-AGGCGGGCG
** * * * *
14150300 GGCGCTACACCGGCCAGACAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTACGTGGGTTT
65 GGCAATAC-GCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT-GAAGGTGGGTTT
* *
14150365 AGGCTCATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
128 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
14150430 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAA
193 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAA
* * * *
14150495 ACTTTTTACGGTTTG-GAATTTTTTAAAAG-TTTTTCGGAAGCAGTTTTGGCCCCAAAGTTGGTA
258 ACTTTTTACGGTTCGAG-ATTTTTT-AAAGTTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
14150558 GACGTGATTCTTGTATTTTTGTTGGCATGCACAAAAAAAATTCAGCTAAAAACCCAAAGTGTACA
321 GACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACACGAAGTGTACA
* * *
14150623 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTATTGGCTACTGGTAGCAAA
385 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
14150688 CCTGTAAAATCTCAAATGCTATTTAAGGGAGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
450 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * * * **
14150753 CCAATATAAGGGCCAAGTACCAGCACCCATCTCACATTATGTGTGCACACCCCCCCCGGTGCCCC
515 CCAATATAAGGGCCAAGTACAAGCACCCATCACACATCATGTGCGCACACCACCCCCGCCG-CCC
* ** * * *
14150818 CGATCGTCGGAACCCTAATACCGCCCATCAGGTTCTTCGGCGATGCTCCGGCGATTGTGCCCCGA
579 CGATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGGTGATGGTG--CCGA
** * * * *
14150883 CGAAGAAAAAT-CACCACCAGCACATGCCCGAGCCCAGCATGTGTTGTCGTAACCCTCGGTCCGA
642 CGAAGAAAAATGCGGCACCAGCAAATGCCCGAGCCAAGCATGTGCTGTCGTAACCCTCGGTCTGA
* **
14150947 TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTTGTATGCCTAAGT
707 TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGT
* * *
14151012 CAACCCACGAAACGAGCGTGCGGGTGCTCAGCCTGCCAGAAGGGCGGGATGCGCAAGCCGGGGAT
772 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCAGCCAG-AGGGCGGGATGCACAAGCCGGGGAT
* * * * * * * **
14151077 CGACCGGGTCCCTCTCTGCATGCTATCGATCCTACTGCCGCAACCTTCGATCCGGTCCAATCT
836 CGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCTTCGGTCTGGTCTGATCT
** * * *
14151140 TAGACTACGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAACGGGTTGGCGA-GCGGGC
1 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-CGG-GAGGCGGGC
* **
14151204 GGGCAGTACG-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTGGATGGGTTT
64 GGGCAATACGCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGAAGG-TGGGTTT
* * * * * *
14151268 AGGCGCATCTACATATTTCTGTGTGACGATGCCA-TTTTATGGCTTGTACATTCATACAATGGTC
128 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
14151332 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAA
193 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAA
* * * * *
14151397 ACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTGGAATGG-GTTTTGGCCCCTAACTTGCTAA
258 ACTTTTTACGGTTCGAGATTTTTTAAAGTTTTTTTGGAA-GGAGTTTTGGCCCCAAACTTGGTAG
* *
14151461 ACGTGATCCTTGTGTTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACACGAAGTGTACAAG
322 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACACGAAGTGTACAAG
*
14151526 ATTTTGTGACCATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
387 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * *
14151591 TGTAAAATCTCAAATGCTCTGTAAGGGGGTGTGAGTTCTCGAGGTTTAATGAGCGATAGGGGGCC
452 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * * *
14151656 AATATAAAGGACAAGTACTAGCACCCA-CGCACATCATGTGCGCACACCACCACCAGCCGCCCCG
517 AATATAAGGGCCAAGTACAAGCACCCATCACACATCATGTGCGCACACCACC-CCCGCCGCCCCG
* * * * * *
14151720 ATCATCGGAACCCTAATGTCGTCGGTCAGGTTCTTCGACGATGCTCCGGTGAAGGTG-AG-TGAA
581 ATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGGTGATGGTGCCGACGAA
* * * **
14151783 GAAAAATGCGGCACCAACAGATGCCCGAGCCAAGCATGTGCTGTCGTAACCCTTGGTCTGATCCA
646 GAAAAATGCGGCACCAGCAAATGCCCGAGCCAAGCATGTGCTGTCGTAACCCTCGGTCTGATCTG
*
14151848 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGACAAC
711 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAAC
* * * **
14151913 CCATGAAACGAGCATGCGGGCGCTCAGCCAGCCAGTGGGATAGGATGCACAAGCCGGGGATCGAT
776 CCACGAAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGG-CGGGATGCACAAGCCGGGGATCGAT
* ** * * * * *
14151978 CGGGTCCCCCTTTATGTGCCACCAATCCTGCTACCGCAACCCTCGGTCTGATCTGATCT
840 CGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCTTCGGTCTGGTCTGATCT
* * * * *
14152037 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAATGAGCGGACGGGTGGTCGGGTG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGAGG-CGGGCG
* * *
14152102 GGCAATATGTCGGCTAGAGAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGAAAGGTGGGTTT
65 GGCAATACG-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG-AAGGTGGGTTT
* *
14152167 AGGCACATCTTCATATTTATGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
128 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* **
14152232 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTTTTCATGATTTTTGAA
193 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAA
* * *
14152297 AGTTTTTATGGTTCGAGATTTTTTTAAGTTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
258 ACTTTTTACGGTTCGAGATTTTTTAAAGTTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
14152362 CATGATCCCTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
323 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACACGAAGTGTACAAGA
* * *
14152427 TTTCGTGACCATTTGAAAAAAGTGTCCCGATTTCAGCCACTTTAATGGCTACTGGCAGCAAACCT
388 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * *
14152492 ATAAAATCTCAAATGCACTTTAA-GGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCCA
453 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
14152556 ATATAAGGGCCAAATACAAGCACCCATCACACATCATGTGCGCACA-CACCCCCGACCCCCCCAA
518 ATATAAGGGCCAAGTACAAGCACCCATCACACATCATGTGCGCACACCACCCCCG-CCGCCCCGA
* *
14152620 TCGTCGGAA-CCTCAATGCCACCGGTCAGGTTCTCCGACGATGCTCC-GTGATGGTGCCCCGACG
582 TCGTCGGAACCCT-AATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGGTGATGGTG--CCGACG
* * * * *
14152683 AAGAAAAATGTGGCACCAGCAAATGCCTGAGCCTAGCATGTGCTGGT-GCAACCCTCGGTCTGGT
644 AAGAAAAATGCGGCACCAGCAAATGCCCGAGCCAAGCATGTGCT-GTCGTAACCCTCGGTCTGAT
* * *
14152747 CTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTCGGAATGAACTCCATATGCCTAAGTC
708 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTC
* * * *** *
14152812 AACCCACGAAACGAGCGTCCCGGCGCTTAGTTGGCCAGAGGGGCGGGATGCACAAGTCGGGGATC
773 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCAGCCAGA-GGGCGGGATGCACAAGCCGGGGATC
* * * * ** * * *
14152877 GGTCGGGTTCCCCTCTGCGTGCTGCCGATCTTGCTGCCTTAACTTTTGGTTTGGTCTGATCT
837 GATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCTTCGGTCTGGTCTGATCT
* *
14152939 TAGACTGGGAATAAACTCCGTATGACTAAGCCAACCGACGAAACGA
1 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
14152985 ATGCTCGAGC
Statistics
Matches: 1603, Mismatches: 217, Indels: 53
0.86 0.12 0.03
Matches are distributed among these distances:
895 1 0.00
896 16 0.01
897 260 0.16
898 14 0.01
899 184 0.11
900 378 0.24
901 183 0.11
902 421 0.26
903 82 0.05
905 60 0.04
906 3 0.00
907 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGAGGCGGGCGG
GCAATACGCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGAAGGTGGGTTTAGG
CACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACT
TTTTACGGTTCGAGATTTTTTAAAGTTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACACGAAGTGTACAAGATTT
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACAAGCACCCATCACACATCATGTGCGCACACCACCCCCGCCGCCCCGATCGT
CGGAACCCTAATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGGTGATGGTGCCGACGAAGAAAA
ATGCGGCACCAGCAAATGCCCGAGCCAAGCATGTGCTGTCGTAACCCTCGGTCTGATCTGATCTT
AGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACG
AAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGCGGGATGCACAAGCCGGGGATCGATCGGGTC
CCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCTTCGGTCTGGTCTGATCT
Done.