Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168025.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39404

Tables:   1   

This is table  1  of  1  ( 56 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10046--10117
15
4.9
15
71
17
53
73
4
4
18
1.15
10063--10131
23
3.0
24
79
10
74
76
1
5
15
1.04
11047--11131
3
29.0
3
70
13
61
56
3
1
38
1.24
11047--11087
16
2.6
15
85
11
55
60
2
2
34
1.23
11047--11239
22
9.4
19
68
20
86
54
6
2
37
1.37
11063--11238
5
33.2
5
70
19
65
53
6
1
38
1.36
11046--11238
30
6.3
31
69
18
86
53
6
2
37
1.38
11042--11238
76
2.7
75
78
14
205
53
6
2
37
1.38
11124--11213
25
3.7
24
77
14
87
47
8
3
40
1.51
11632--11665
16
2.1
17
94
5
61
61
20
0
17
1.34
11632--11719
8
11.6
8
68
11
51
53
26
2
18
1.56
11632--11701
15
4.7
15
76
5
61
57
24
2
15
1.52
11692--11746
15
3.7
15
74
13
60
49
30
0
20
1.49
11741--11789
25
2.0
25
91
0
80
42
26
2
28
1.66
11692--11781
16
5.8
16
69
17
57
45
30
1
23
1.60
11692--11786
15
6.2
16
70
15
58
46
29
1
23
1.59
12721--12829
22
4.9
22
73
11
80
37
22
14
25
1.92
13023--13135
33
3.4
33
80
0
127
33
23
10
31
1.89
13598--13703
32
3.3
32
79
6
115
36
19
13
30
1.90
14046--14100
28
2.0
28
85
3
76
27
25
12
34
1.92
14326--14387
12
5.3
11
83
12
54
82
16
1
0
0.75
14326--14373
24
2.0
24
87
4
69
83
14
2
0
0.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16563--16692
8
17.4
8
70
17
66
50
26
0
21
1.54
16557--16645
14
6.2
14
74
10
81
55
26
1
16
1.49
16557--16645
29
3.1
29
76
7
101
55
26
1
16
1.49
16564--16724
43
3.7
44
72
14
138
50
28
0
20
1.53
16651--16718
9
8.4
8
71
12
50
48
32
0
19
1.49
16651--16703
23
2.2
23
90
6
79
47
33
0
18
1.49
16656--16727
32
2.3
33
80
9
96
47
31
0
20
1.51
16557--16724
14
11.7
14
67
16
76
51
28
0
19
1.52
16743--16797
22
2.5
22
77
19
60
50
29
3
16
1.62
19852--19881
14
2.1
14
93
0
51
53
0
13
33
1.40
20027--20085
20
2.9
21
73
19
61
47
10
6
35
1.64
20100--20161
22
2.8
22
73
9
54
43
3
11
41
1.56
20381--20441
22
2.8
22
75
5
61
50
4
4
39
1.45
20499--20548
21
2.3
22
80
10
59
54
10
2
34
1.45
20630--20682
22
2.4
22
84
6
63
58
3
3
33
1.34
20641--20737
11
9.1
11
66
13
51
55
5
4
35
1.41
20662--20730
19
3.5
19
73
11
66
53
4
4
37
1.41
20683--20769
22
4.0
21
76
11
68
51
5
8
34
1.55
20654--20769
44
2.7
42
79
11
103
52
5
6
35
1.51
20880--20942
22
2.9
22
83
6
83
46
12
6
34
1.68
20838--20942
43
2.4
44
79
4
106
47
13
5
33
1.66
20904--20959
22
2.5
22
85
0
67
50
10
7
32
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21393--21538
67
2.2
65
79
9
145
50
6
7
34
1.57
21551--21582
16
2.1
15
94
5
55
50
6
6
37
1.53
21563--21803
22
11.0
22
70
12
75
47
4
9
38
1.58
21686--21801
44
2.6
44
87
0
160
44
4
12
38
1.61
21684--21801
22
5.4
22
80
4
121
44
4
11
38
1.61
22136--22255
21
5.7
21
74
11
84
52
11
1
34
1.48
22173--22252
42
1.9
42
89
0
124
55
13
0
31
1.39
26731--26765
14
2.5
14
95
0
61
74
5
11
8
1.22
34654--34688
18
1.9
18
88
11
54
74
2
11
11
1.18
35024--35067
20
2.1
21
84
12
56
70
6
4
18
1.27
35990--36029
13
3.1
13
85
0
53
27
37
25
10
1.88
37417--37460
18
2.4
18
78
14
54
79
9
2
9
1.02

Tables:   1

The End!