Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168029.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39010

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1134--1169
18
2.1
18
94
5
65
16
13
11
58
1.63
9884--9931
24
2.0
24
83
4
60
22
0
12
64
1.27
12329--12392
19
3.7
19
67
30
54
23
26
20
29
1.99
12407--12449
20
2.2
20
100
0
86
37
32
25
4
1.77
12468--12512
20
2.2
20
84
0
54
33
28
22
15
1.95
12840--12895
19
3.0
19
92
7
89
5
0
3
91
0.52
12842--12891
26
1.9
26
87
0
73
6
0
4
90
0.57
12841--12892
27
1.9
27
88
0
77
5
0
3
90
0.55
12840--12893
28
1.9
28
88
0
81
5
0
3
90
0.53
12840--12901
30
1.9
31
87
12
90
8
0
4
87
0.68
12840--12884
1
45.0
1
93
0
72
2
0
2
95
0.31
12916--13385
153
3.0
157
89
6
697
28
15
17
39
1.89
16657--16690
1
34.0
1
93
0
59
97
0
2
0
0.19
17080--17139
7
8.7
7
77
17
63
76
0
15
8
1.00
17073--17141
29
2.3
29
87
7
95
76
0
14
8
1.00
17058--17103
12
3.7
12
86
11
65
76
0
13
10
1.03
17062--17143
11
6.8
12
71
20
55
75
0
15
8
1.03
17080--17132
21
2.6
19
85
11
70
77
0
15
7
0.98
17183--17212
1
30.0
1
93
0
51
96
3
0
0
0.21
18340--19010
40
16.6
40
91
6
1042
22
17
22
37
1.94
18340--19010
81
8.3
80
92
5
1040
22
17
22
37
1.94
19012--19094
8
9.9
8
77
16
71
85
8
0
6
0.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19011--19103
10
9.5
10
75
13
77
84
8
0
6
0.76
19011--19095
19
4.3
19
80
16
93
85
8
0
5
0.73
19021--19092
24
3.0
24
82
13
94
84
8
0
6
0.77
19011--19093
34
2.4
36
82
11
102
85
8
0
6
0.74
19009--19103
18
4.9
19
79
15
97
83
9
0
7
0.82
19011--19095
1
85.0
1
73
0
62
85
8
0
5
0.73
19288--19393
3
34.3
3
71
22
55
31
0
5
63
1.18
19883--19946
19
3.7
19
67
30
54
23
26
20
29
1.99
19961--20003
20
2.2
20
100
0
86
37
32
25
4
1.77
20022--20066
20
2.2
20
84
0
54
33
28
22
15
1.95
20452--20921
153
3.0
156
90
4
730
28
15
17
38
1.90
30210--30346
71
2.0
70
82
2
168
33
11
23
31
1.91
37860--37944
34
2.4
35
92
5
145
32
4
20
42
1.72

Tables:   1

The End!