Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168030.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 38961
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Found at i:6106 original size:896 final size:894
Alignment explanation
Indices: 3659--23967 Score: 27532
Period size: 893 Copynumber: 22.9 Consensus size: 894
3649 GTTGACTTAG
* *
3659 GCATACGGAGTTCATTCCCAGTGTAAGATCGAACTGGACCGAGGGTTGCGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* **
3724 CTCGGGCATGTGCTGGTGCCATATTTTTTTTCGCACGGGGCACCATCACCGGAGCATCGCCGGAG
66 CTCGGGCATGTGCTGGTGCCATA-TTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAG
* ** * * * *
3789 AACTTGACCAACGGCATTGGTGTTTCGGCGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTGT
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGCGGGGGGTGTGCGCACATGATGTGC
* *
3854 GATGGGTGC---TA----G----TA-CTTGGCCCCCTATCCCTCATCAAACCTCGAGAAGTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
** * *
3907 CCCCCTTAAAGAGCGCTTGAGATTTTACAGGTTTGCTGGCAGTAGCCATTAAAGTGTCTAAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
3972 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
** * * * * *
4037 GCAACCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGCCCAAAACTCTTTCAGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
* *
4102 TTTAAAAAAAATCGCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
454 TTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
4167 GCCATGAAACTTCACATCAAGGCTTAAGGGA-CATTGTATGAATTTACAAGACATAAAAATGGCA
519 GCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * *
4231 TTGGCATGGCA-AAACTATGAAGATGTGCCTAAACCCTCCTACCACCCTATCGATCCACCGCTTA
584 TTGGCATGGCAGAAA-TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
4295 TGCATCCCGCCTATCTGGCCGGCATAGTGCCCGGCCGCCCGCTCGTTTCTTCGATTGGCTTAGGC
648 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
** * * * * *
4360 ATACTAAGTTCATTCCCAGTCTAAGAT-TGTACCACACCGAGGGTTGTGGCAGCAGGATCAGCAG
713 ATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAG
*** * *
4424 CACGTAGGGGGGACTTGGTC-ATTCCCCGAG-TTGCACATCCTGCCCCTCTGGCAGGCTGAGCGC
777 CACGTAGGGGGGACCCAGTCGA-TCCCCG-GCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGC
* * * * *
4487 CCGTACGATTGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTCA
840 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * * * *
4542 GCATACAGAGTTCGTTCTCAATGTAAGATCAGACCAGACCAAGGGTTACGGGTGCACATGCAGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * *
4607 CTCGGGCATGTGCTGGTGCCGTATTTGTTTTTCGCACGAGGCACCA---TC----C-T---CGGA
66 CTCGGGCATGTGCTGGTGCCATA-TT-TTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGA
* * *
4661 GAATCTGACCGGCGGCATTGGGGTTTCGACGATTGGGGGGGCGGGGGGTGTGTGGGCACATGATG
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGC-GGGGG-GTGTGCGCACATGATG
* *
4726 TGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCACATCAAACCTCGAGAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
4791 ACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
4856 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACTCTTCGAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* *
4921 TGTGCATGCCAA-AAAAATACAAGGATCACGTCTACCCAGTGTGGGGCCAAAACTCCTTCTGAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * *
4985 AAATTTTAAAAAAATC-CTGAACCGTAAAAATTTTCCAAAATCGTGAAAAATAAAAAACGAGTCG
451 AAATTTTAAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
*
5049 TCTTGCCATGAAACTTCACATGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
515 TCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
5114 GGCACTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCACCGACCACCCTATCGATCCACGGC
580 GGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * *
5179 TTGCACATCCCGCCTCTCTGGCCGACGTAGTGCACGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
645 TTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* *
5244 GGCATACGGAGTTCATTCCCAG-CTAAGATCAGACCAGACTAAGGGTTGCGGTAGCAAGATCAGC
710 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGC
* * * * * * *
5308 AGCATGTAGGGGGGACCCAGCCGATCCCTGGCTTACGCATCCTGCCCCTCTAGCCGACTGAGTGC
775 AGCACGTAGGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGC
* ** * *
5373 CCGCACGCTCATTTTATGGGTTGACTTGGGCATATGGAGTTCATTCCCAGTCTAA
840 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * * *
5428 GCATACAAAGTTCATTCCCAATCTAAGATCAGATCGGACCGAGGGTTGGGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * *
5493 CTTGGGCATGTGCTAGAGTCATATTTTTTTCACCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
5558 ACCTGACCGGCGGCATTAGGGTTCCGACAATTGGTGGGGCGTGCGGGGTGTGCGCACATGATGTC
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATTGG-GGGGCG-G-GGGGTGTGCGCACATGATGTG
* ** *
5623 CGATGGATGCTGGTACTTGGTGCTTATATTGGCCCCCTATCCCTCATCGAACCAT-GAGAACTCA
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAACTCA
*
5687 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
5752 TGGGGACATTTTTTTCAAATTGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
** *
5817 GTGCATAACAACAAAAATACAAGGATCACGTCTACCATA-TTTGGGGCCAAAACTCCTGCTGAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCA-AGTTTGGGGCCAAAACTCCTTCTGAAA
* * ** * * * *
5881 GAATTTTAAAAAAATCTCGAACCGTAAAGAGTTTTGAAAATTGTCAAAAATAGAAAATGAGTCGA
451 AAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* *
5946 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGAATGAATTTGCAAGCCATAAAAATG
516 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
6011 GCATTGGCATGGGAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
581 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * *
6076 TGCGCATCTCGCCTCTCTGGCTGGCGTAGTGCCCGCCCGTCCGCTCATTTTGTCGGTTGGCTTAC
646 TGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* ** * ** *
6141 GCATACGGAGTTCATTCCCAGTCTCAGATTGGACCAGACTGAGGGTTGCAGCCGCAGGATCAACA
711 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCA
* * * * *
6206 GCACGTAGGGGGGACTCGGTCGATCCTCGGCTTGCACATCTTGCCCCTCTGGCCGGCTGAGCGCC
776 GCACGTAGGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
*
6271 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
841 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * * *
6325 GCATATAGAGTTCATTCCCAGTGTAAGATCAGACCAGACC-ATAGGCTGCGGGTGCACATGCCGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGA-GGGTTGCGGGTGCACATGCTGG
** * ** *
6389 GCTTAGGCATGTGCTGGTGCCGCAT-TTTTTTTTGCCCGGGGCACCATCACCGGAGCATCACCGG
65 GCTCGGGCATGTGCTGGTG-C-CATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGG
* * *
6453 AGAAGCTGACCAGCGGCATTGGGGTTCCAACGATTAGGGGGGCGGGGGGGTGTGCGCACATGATG
128 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGC-GGGGGGTGTGCGCACATGATG
6518 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
6583 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
6648 ATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTT
6713 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
*
6778 AAATTTTAAAAAAAT-TCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCG
451 AAATTTTAAAAAAATCT-CGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
6842 TCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
515 TCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
6907 GGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
580 GGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
*
6972 TTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
645 TTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
*
7037 GGCATAC-GATGTTCATTCCCAGTCTAAGATCAGACCAGACCT-AGGGTTGTGGTAGCAGGATC-
710 GGCATACGGA-GTTCATTCCCAGTCTAAGATCAGACCAGA-CTGAGGGTTGCGGTAGCAGGATCA
* *
7099 GACAGCACGTAGGGGGGACCCAGGCGATCCCCGGATTGCGCATCCTGCCCCTCTGGCCGGCTGAG
773 G-CAGCACGTAGGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAG
** * *
7164 CGCTTGTACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
837 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** *
7222 G-AT-C--A----A--ACC--------A---GA-CTGA---A-GGTTATGGGTGCACATACTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * *
7261 CTCGAGCATGTGCTGGTGCCACTTTTTTTTTTCACCCGGGGCACCATCGTCGGAGCATCGTCGAA
66 CTCGGGCATGTGCTGGTGCCA--TATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGA
* * * *
7326 GAACCTGACCGACGGCATTGGAGTTCCGACAATTGGGGCAGGCGGGCGGGGTATGCGCACAT-AT
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGG--GGC-GG-GGGGTGTGCGCACATGAT
* * *
7390 GTGCGATGGGTGCTGGTACTTGGCCCTTATACTGGCCCCCTATCCCTCATGAAACCTTGAGAACT
190 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * **
7455 AACACCCCCTTAAAGGGCATTTGAGATTTTACAGGTTTGCTGAAAGTAGCCATTAAAGTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
7520 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTT
*
7585 TTGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACT-CTTCTGAA
385 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTG-A
*
7649 AAAAATTTTAAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGT
449 AAAAATTTTAAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
7713 CGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
513 CGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
*
7778 ATGGCATTGGCATGGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCTATCGATCCACG
578 ATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* *
7842 GCTTGCGCATCCCGCCTCTCTGGCCCGCGTAGTG-CCGCCCGCCTGCTCGTTTCGTCGGTTGGCT
643 GCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* *
7906 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTT--GGCAGTAGGATCA
708 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCA
* * * *
7969 GCAGCA-GTAGGGGGGAACCC-GATCGATCCCAGGCTTGCACATCCTGCCCCTTTGGCTGGCTGA
773 GCAGCACGTAGGGGGG-ACCCAG-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGA
* * * * *
8032 GCGCTCGCATGCTTGTTCCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
8091 GCATACGAAGTTCATTCCTAGTGTAAGATCGGACCGGACTGAGGGTTACGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * *
8156 CTTGGGCATGTGCTGGTGCCGTATTTTTTTCGCCCGGGGTACCA---T-----C--C-CCGGAAA
66 CTCGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
*
8210 ACCTGACCGACGGCATTGGGGTTCCGACGATTGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGG-C-GGGGGGTGTGCGCACATGATGTG
* * * *
8275 TGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTCTTCAAACATC-ATGAACTCA
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GAACTCA
* * * * * * *
8339 CACCCCCATTAAAGAGCTTTTGAGATTTTATAGGTTCGCTACCAGTAGCCATTAATGTGTTTGAG
257 CACCCCC-TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
8404 ATGGGGACACTTTTTTTAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * * * * *
8469 TGTGCATGCCAAAAAAAATTCAGGGATCAGGTCTACCAAATTTTGGGCCAAAACGCCTTCTAAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * * * * * *
8534 AAATTTTCAAAAAATGTCGAACCGTAAAAAGTTTTAAAAATCATGAAAAATAAAAAATGAGTCAT
451 AAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
8599 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACTAATGTATGAATTTACAAGCCAAAAAAATG
516 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
8664 GAATTGGCACGACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
581 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * *
8729 TGTGCATCCAGCCTCTCTGGCCGGTGTAGTGCCAGTCTGCCCGCTCGTTTC-TCGGTTGGCTTAG
646 TGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * *
8793 GCATA-TGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCAGCAGCAGGATC-GAC
711 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAG-C
* * * * * **
8856 AACACGTAGGAGGGGACCCGGTGGATCTCCGGCTTGTGCATCCTGCCCCTCTGGCCGAATGAGCG
775 AGCACGTAGG-GGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCG
*
8921 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
839 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
8977 GCATATGGAGTTCATTCCCAGTGTAAGATCGGA-CGGA-CGAGGGTTGCGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * *
9040 CTCGGGCATGTGCTGGTGCCGCAT-TTTTTTTCGCCCGAGGCACCATCGCCGGAGCATCACCGGA
66 CTCGGGCATGTGCTGGTG-C-CATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGA
9104 GAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGC
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGC
9169 GATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
9233 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
9298 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
9363 GCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
*
9427 TTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
454 TTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
9492 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * *
9557 TTGGCATGGAAGAATTATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGCCTTAC
584 TTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
9622 GCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTTCGTTTCGTCGGTTGGCTTAGGCA
649 GCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* *
9687 TAC-GATGTTCATTCCCAGTCTAAGATCAGACCAGACCT-AGGGTTGTGGTAGCAAGATC-GACA
714 TACGGA-GTTCATTCCCAGTCTAAGATCAGACCAGA-CTGAGGGTTGCGGTAGCAGGATCAG-CA
* * *
9749 GCACGTAGGGGGGACCCAGGCGATCCCCGGCTTGCGCATCCTGCCCTTCTGGCCGGCTGAGCGCT
776 GCACGTAGGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
* * *
9814 TGTACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T--
841 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * **
9864 -C-TA---AG---------A-T-T-A-A----ACCGGACTGAAGGTTATGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * * *
9907 CTCAGGCATGTGCTAGTGCCACTTTTTTTGTTCACCTGGGGCACCATCGTCGGAGCATCGCCGAA
66 CTCGGGCATGTGCTGGTGCCA-TATTTTT-TTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGA
* * * *
9972 GAACTTGACCGACGGCATTGGAGTTCCAACGATTGGGGGGGCGGGGGGGTGTGCGCACATGATGT
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGC-GGGGGGTGTGCGCACATGATGT
*
10037 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
10102 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
10167 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
*
10232 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
* *
10297 AATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
452 AATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
10362 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*
10427 CATTGGCATGGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
582 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * **
10492 GCGCATCCCGCCTCTCTGGCCGGCATAGTGCACGCCCGCCTACTCGTTTCGTCGGTTGGCTTAGG
647 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * ** *
10557 CATACGGAGCTCATTCCTAGTCTAAGATCAGACCAGACTGAGGGTTATGGTAGCAGGATCAGTAG
712 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAG
* * *
10622 CACGTAGGGGGGACCCAGTCGATCCCCAGG-TTGCACATCCTGCCCCTCTGGCTGGCTGAGCGCT
777 CACGTAGGGGGGACCCAGTCGATCCCC-GGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
* *
10686 CGCATGCTCGTTCCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
841 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
10740 GCATACGAAGTTCATTCCTAGTGTAAGATCGGACCGGACTGAGGGTTACGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * *
10805 CTCGGGCATGTGCTGGTGCCGTATTTTTTTCGCCCGGGGTACCA---T-----C--C-CCGAAGA
66 CTCGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
10859 ACCTGACCGACGGCATTGGGGTTCCGACGATTGTGGGGCCAGGGGGTGTGCGCGCAAGATGTGCG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATTG-GGGGGCGGGGGGTGTGCGCACATGATGTGCG
* * * * * *
10924 ATGGGTGCTGCTACTTGACCCTTATATTGGCCCCCTATCCCTCTTCAAACATCAAGAACCCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * * * *
10989 CCCCATTAAAGAGCATTTGAGATTTTATAGGTTCGCTACCAGTAGCCATTAATGTGTTTGAAATG
260 CCCC-TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
11054 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
** * * * * *
11119 GTGTGCCAAAAAAAATTCAAGGATCAGGTCTACCAAGTTTTGGGCCAAAACGCCTTCT-AATAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAA-AAA
* * * * * * *
11183 ATTTTCAAAAAATGTCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCATCT
453 ATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
11248 TGCCATGAAACTTCACATGAAGGCTTAAGGGACTAATGTATGAATTTACAAGCCA-AAGAAATGG
518 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA-AAATGG
* ** * *
11312 AATTGGCACAGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCTATCCACGGCTT
582 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
11377 GCGCATCCAGCCTCTCTCGCCGGTGTAGTGCCCGTCCGCCCGCTCGTTTTGTCGGTTGGCTTAGG
647 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * *
11442 CATA-TGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTGGCAGCAGGATC-GACA
712 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAG-CA
* * * * * *
11505 GCACGTAGGAGGGGACCCGGTTGATCTCCGGCTTGTGCATCCTGCCCCTCTGGCCGACTGAACGC
776 GCACGTAGG-GGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGC
* *
11570 CCACACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAA
840 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** * * * *
11625 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCAGACTAAAGGTTGTGGCTGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * *
11690 CTCAGGCATGTGCTAGTGCCACATTGTTTTTCGCCTGGGG---CA----C----CATCGCCGGAG
66 CTCGGGCATGTGCTGGTGCCATATT-TTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAG
* * *
11744 AAGCTGACCAGTGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGGGGGTTGTGCGCACATGAT
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGC----GGGGGG-TGTGCGCACATGAT
* *
11809 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGTCCCTCTATCCCTCATCAAACCTC-AGGAAC
190 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GAAC
*
11873 TCACACCCCCTTAAAGAGCATTTGAGGTTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
254 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
11938 AAATGGGGATATTTTTTTCAAATTGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAAGTTT
319 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *** * *
12003 TCTATGCATGCCAAGAGAAATACAAGGATCTTATCTACCAAGTTTGGGGCCAAAAATCCTTCTAA
384 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGA
* * ** *
12068 AAAAATTTTAAAAAAATCCCGAACCGTAACAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTC
449 AAAAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
* *
12133 GACTTGCCATGAAACTTCATATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
514 GTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * *
12198 AGGCATTGGCATGGTAGAAATATGAAGATGAGCCTAAACCCACCTACCACCCTATCGATCCACGG
579 TGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
*
12263 CTTGTGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
644 CTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * * * * *
12328 AGGCATACGGAGTTCATTCCCAATCTAAGATCGGACCGGACTGAGGTTTACGGTAGCAGGATCGG
709 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAG
* ** * *
12393 TAGCACACAGGGGGGGA-CC---CGATCCCTGGCTTGCACATCCTG-CCC-CT------CT--G-
774 CAGCACGTA-GGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGC
* *
12443 G--C-CACGCTCGTTCCATGGGTTGACTTAGGCATACGGAG----TT--CA-T-T--
838 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
12487 -C---C------CA-----AG-GTAAGATCGGACTGGACCGAGGGTTGCGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* *
12536 CTCGAGCATGTGCTGGTGCTGCAT-TTTTTTTCGCCCGGGGCACCATCG-CGGAGCATCGTCGGA
66 CTCGGGCATGTGCTGGTGC--CATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGA
* * *
12599 GAACCTGATCGGCGGCATT-GGGTTCTGGCGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTG
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGCGGGGGGTGTGCGCACATGATGTG
12663 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
12728 A-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
12792 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
12857 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCTAAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
* *
12922 ATTTTAAAAAAATCTTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
453 ATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
12987 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCTTAAAAATGGC
518 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* ** *
13052 ATCGGCACAGCAGAAATATGAAGATGTGCCTAAACCCATCTACCACCCTATCGATCCACGGCTTG
583 ATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * * *
13117 TGCATCCCGCCTCTCTGGTCGGCATCGTGCCAGCCCGTCCGCTTGTTTTGTCGGTTGGCTTAGGC
648 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
** * ** ** * * * *
13182 ATATAGAGTTCATTCCCAGTATAAGATTGGA-TTGAATCGAGGGTTGCGATAGCAAGATC-GATA
713 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACT-GAGGGTTGCGGTAGCAGGATCAG-CA
* * * * *** * *
13245 GCATGCAGGGGGTGACCCGGTCGATCCCCAGCTTGCGCATCCTATGCCTCTGGTCGGTTGAGCGC
776 GCACGTAGGGGG-GACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGC
* *
13310 CCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
840 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
13365 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCAGACCAAGGGTTGCGGGTGCACATGCTTGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * *
13430 CTCGGGCATGTGCTGGTGCCATATTTTTTTTTGCTCGGGTCACCATCGTC-G-G-A-------A-
66 CTCGGGCATGTGCTGGTGCCATA-TTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAG
* *
13484 AACCTGACAGGCAGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCG
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCG
13549 ATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACA-
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
13612 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
13677 GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
13741 CATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAAT
*
13805 TTTAAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
455 TTT-AAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
13870 GCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
13935 TTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
584 TTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* ** **
14000 GCATCCCGCCTCTCTGGTCGGCGTAGTGCCCGCCCATCCGCTCGTTTCGTCGGTTCACTTAGGCA
649 GCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * * **
14065 TACAGAGTTCATTCCCAGTCTAAGATCAGACCGGCCTGAAGGTTGCAGTAGCAGGATTGGCAGCA
714 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAGCA
* * * ** * ** *
14130 CATAGGGGGGACCC-GACCGATCCCCGGCTTGTGCATCCTGCCCCTCTGGCCGATTAAATGCCAG
779 CGTAGGGGGGACCCAG-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCG
** * *
14194 CATACTCGTTTCATGGGTTGACTTAGGCATACGTAGTTCATTCCCAGTCTAA
843 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * * ***
14246 GCATACAGAGTTCATTCCCAGGGTAAGGTCAGATCAGACCAAGGGTTGCGGGTGCACATGCTAAA
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * *
14311 CTCGAGCATGTGCTGGTGCCGTATTTTTTTTTGCCCAGGGCACTATCGTC-GA--A-------A-
66 CTCGGGCATGTGCTGGTGCCATA-TTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAG
** * * * *
14365 AACCTGATTGACGGCATTGGGGTTCCGGCGATTGAGGGGCGGGGGGTGTGCGCACATGATGCGCG
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCG
* * **
14430 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCACCTATTCCTCATCAAACCTTAAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
14495 CTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
*
14560 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
14624 CATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAAT
* *
14688 TTT-AAAAAATCTCGAACCGT-AAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
455 TTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
14751 CCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
520 CCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
14816 TGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
585 TGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
14881 CATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
650 CATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
** *
14946 ACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATTGGTAGCAC
715 ACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAGCAC
** * * * *
15011 GTAGAGGGGGACCTGGCCGAACCTCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCTGC
780 GTAG-GGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGC
* * *
15076 AAGCTCATTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
844 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15127 GCATACGGAGTTC-TTTCCAGTGTAAGATCGGACCGGACCGAGGGTTACGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* ** * ** * * *
15191 ATCAAGCATGTGCTGGTACCGCATTTTTTTCGCCTGGGGCACCATCATCGGAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
15256 ACCTGACCGACGGCATTGGGGTTTCGACGATTGGGGGGGCGGGGGGGCTGTGCGCACATGATGTA
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGC-GGGGGG-TGTGCGCACATGATGTG
*
15321 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCTC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
15386 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGACATTAAAGTGTCTAAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
15451 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTTGAGTTTTTAGCTGAATTGTTTTT
323 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATT-TTTTT
15516 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-TCCTTCTGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
*
15580 AA-TTT-AAAAAATC-CGAACCATAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
452 AATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
15642 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAATG
517 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAAATG
15707 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
581 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
*
15772 TGCGCATCCCGCCTCTCTGGCCGGCGTAAGTGCCCG-CC-CCCGCTCGTTTCATCGGTTGGCTTA
646 TGCGCATCCCGCCTCTCTGGCCGGCGT-AGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * ** * * *
15835 GGCAT-C-GAGTTCATTCCCAGTCTAAGATCGGACC-GACTGAAGGTTATGGCAGTAGGATCGGC
710 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGC
* * *
15897 AGCACGTAGGGGGAGGACCCA-CCGATCCCC-GC-TGTGCATCCTGCCCCTCTGGCCGGCTGAGT
775 AGCACGTA-GGGG-GGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGC
* *
15959 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGGGTTCATTCTCAGTCTAA
838 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* ** * * *
16016 GCATACGGAGTTCATTCCCAGTATAAGATCAAACCAGACCGAGGGTTGTGGGTGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * ** * *
16081 CTTGGGCATGTGCTGGTGCCATATTTTTTTTTGCCTGGGGCACCATCACCGGAGCATCACCGGTG
66 CTCGGGCATGTGCTGGTGCCATA-TTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAG
* *
16146 AACCTGACTGGCGGCATTGGGCTTCCGACGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTGC
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGCGGGGGGTGTGCGCACATGATGTGC
* * * * * * ** *
16211 GATGGGCGCTGGTACTTGGCCCTTAAATTAGCTCCCTCTCTCTCATGGAACCTCAAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* ***
16276 CCCCCTTAAAGAGCATTTAAGATTTTACAGGTTTGCTAAAAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
16341 GGGACAGTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * **
16406 GCATGCCAA-AAAAATACAAGGATCACATCTACCAGGTTTTGATGCCAAAACTCCTTCTGGAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAG-TTTGGGGCCAAAACTCCTTCT-GAAAA
* * * *
16470 AA-TTTAAAAAAATCCCGAACCATAAAATGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATC
452 AATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * *
16534 TTGCCATGAAATTTCACATGAAGGCTTAAGGGACCACTGTATGAATTTGCAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * ** * * * * *
16599 CATTGGTACGATAGAAATATGAAGATGTTCCTAAACCCACCTACCACTCTATCGATCCATGACAT
582 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * ** *
16664 GCGCATCCCGCCTCTCTGGCCGACATAGTGCACGCCCGCCTACTCATTTCGTCGGTTGGCTTAGG
647 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * ** *
16729 CATACGGAGCTCATTCCTAGTCTAAGATCAGACCAGACTGAGGGTTATGGTAGCAGGATCAGTAG
712 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAG
* * * *
16794 CACGTAGGGGGGACCCAGTCGGTCCCCAGG-TTGCACATCCTGCCCCTCTGGCTGGCTGAGCGCT
777 CACGTAGGGGGGACCCAGTCGATCCCC-GGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
* * *
16858 CGCATGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
841 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
16912 GCATACGGAGTTCATTCCTAGTGTAAGATCGGACTGGACTGAGGGTTACGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * *
16977 CTCGGGCATGTGCTGGTG-CGTATTTTTTTTCGCCCGGGGCACCATCG-CCGAGCATCGTCGGAG
66 CTCGGGCATGTGCTGGTGCCATA-TTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAG
17040 AACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCG
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCG
*
17105 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
17170 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
17235 GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
17300 CATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA-
17365 TTTTAAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTG-AAAATAGAAAACGAGTCGTCT
454 TTTTAAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
17428 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
17493 ATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTG
583 ATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
17558 TGCATCCAGCCTCTCTGGCCGACGTAGTGCCCG-CTGCCCGTTCGTTTCGTCAGTTGGCTTAGGC
648 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * * * * *
17622 ATACAGAGTTCATTCCCAGTCTAAGATCGGATCAAACTGAGGGTTGCGATAGTAGGATCGGCAGC
713 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAGC
* * * * * *
17687 ACATAGGGGGGGACCC-GACCGATCCCCGGCTTGTGCTTCCTGCCGCTCTGGTCGGCTGAGCGCC
778 ACGTA-GGGGGGACCCAG-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
* * * *
17751 CGCACACTCGTTTCGTGGGTTGACTTAGGCATGCGAAGTTCATTCCTAGTCTAA
841 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
17805 GCATACGGAGTTCATTCCCAGTGTAAGATGGGATCGGACCGAGGGTTACGGGTACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* *** * ** * * *
17870 CTTGGGCATGTGCTGGTGCTGCATTTTTTTCACCTAGGGCACCATTGTCGGAGCATCGCCGGGGT
66 CTCGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * * * *
17935 ACCTAACCGGCAGCATTGGGATTCCGACGATTGGATGGGTGGGGGGTGTACGCACATGATGTGCA
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATTGG-GGGGCGGGGGGTGTGCGCACATGATGTGCG
*
18000 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
18065 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
18130 GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
18195 CATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA-
*
18260 TTTTAAAAAAATC-CTGAACCATAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
454 TTTTAAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* * *
18324 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATGGG
518 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
18389 ATTGGCATGGTAGAAATATGAAGAAGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
583 ATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
18454 CGCATCCCG-CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
648 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * ** * * * * * *
18518 ATATGAAGTTCATTCCCAGTCTAAGATTGGATCGGA-TGAAGGGTTACGGTAGTAGAATTAGCAG
713 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTG-AGGGTTGCGGTAGCAGGATCAGCAG
* * * * *
18582 CACGTAGGGGGGACCC-GACCGATCCCCGGCTTGTGCATCCTGCCCCTTTAGCCGACTGAGCGCC
777 CACGTAGGGGGGACCCAG-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
* * * * *
18646 CGCACACTCGTTTCATGGGTTGACTTTGGCATACAGAGTTCATTCTCAGTCTAA
841 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** * * * * * *
18700 GCATGCGAAGTTTGTTCTCAGTGTAAGATCGGAACAGACTGAGGGTTACAGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * * * * *
18765 CTCGAGCATGTGCTGGTGCCACATTTTTTCTTGCCCGAGGCTCCATCATTGGAGCATCACCGGAG
66 CTCGGGCATGTGCTGGTGCCATATTTTTT-TCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAG
** * *
18830 AACCTGATTGGTGGCATTGGGGTTCCGGCGATTGGGGGGGCGGGGGGGTGTGCGCACATGATGTG
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGC-GGGGGGTGTGCGCACATGATGTG
*
18895 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
18960 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * ** *
19025 GGGGACACTTTTTTCAAATGGTCAAAAAATCTTGTAAACTTCTTGTTTTTAGCTGAATTGTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
19090 TGCATGCCAACAAAAATACAAGGATCACATCTACCAGGTTTGGGGCCAAAAATCCTTCTGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
* * * *
19155 ATTTAAAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTCAACAATAGAAAACGGGTCGTC
453 ATTTTAAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
** * *
19219 TTGCCGCGAAACTTCACATCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAGAAATGG
517 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*** * * *
19284 CATTGGCACAACAGAGATATGAAGATGTGCCTAAACCCACCTACCGCCCTATCGATCCATGGCTT
582 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
19349 GCGCATCCCGCCTCTCTAGCCGACGTAGTGCCTGCCCGCCCGCTCGTTTCATCAGTTGGCTTAGG
647 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* ** * * *
19414 CATACAGAGTTCATTCCCAGTCTAAGATCAGACTGGACTAAGGGTTGTGATAGCAGGATCAGCAG
712 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAG
* * * *
19479 CACGTAGGGGGGGACCCGGTCGATCCTCGGCTTGCGCATCCTGCCTCTCTGGCCGGTTGAGCGCC
777 CACGTA-GGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
** * * *
19544 CGCACGCTTATTTCTTGGGTTGACTTAGGCATGCGGA-TTCCATTCCCAGTCTAT
841 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT-CATTCCCAGTCTAA
* * * * *
19598 GCATACGGAGTTCATTTCCTAGTGTAAGATCAGATCAGACCGAGGGTTGCGGGTGCACATGTTGG
1 GCATACGGAGTTCA-TTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGG
* * **
19663 GCTTGGGCATGTGCTGGTGCCGCAT-TTTTTTTCGCCTGGGGCACCATCG-CTGGAGCATCATCG
65 GCTCGGGCATGTGCTGGTG-C-CATATTTTTTTCGCCCGGGGCACCATCGTC-GGAGCATCGCCG
* * * * *
19726 GGGTACCTAACCGGCGGCATTGGGGTTCCGACGATT----GGAGGGGGGTGTGCACACATGATGT
127 GAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGT
* *
19787 GCGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
19852 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGCTTGCTACCGGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
19917 TGGGGACACTTTTTTCAAATGGTTACAAAATCCTGTACACTTCGGGCTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
*
19982 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTGTGGGGCCAAAACTCCTTCTGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
* * *
20047 AATTTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
452 AATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
20112 TAGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * *
20177 CATTGGCATGGAAAAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCACGACTT
582 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
*
20242 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGG
647 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * ** * * * * * * *
20307 CATATGGAGTTCATTCCCTGTCTAAGATTGGATCAAAC-CAGGGGTTGTGGTAGTAGGAT-TGAA
712 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGA-GGGTTGCGGTAGCAGGATCAG-C
* * * * *
20370 AGCACGCAGGGGGGCACCCAGCCGATCTCCGGCTTGCGCATCCTGCCCCTCTGGCTGGCTGAGCT
775 AGCACGTAGGGGGG-ACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCG
* * * *
20435 CCCGCAAGTTCATTTCGTGGGTTGACTTAGGCATGCGGAGTTCATTCCCAGTCTAA
839 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
20491 ACATATGGAGTTCATTCCCAGTGTAACATCGAACCGAACCGAGGGTTGTGGGTGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * * *
20556 CTTGGGCATGTGCTGCTGCCATATTTTTTTTTCGTCCGGGGCACCATTGCCGGAGCATCGTCGGA
66 CTCGGGCATGTGCTGGTGCCATA--TTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGA
* * *
20621 GAACC-GATCGGCGGCATTGGGGTTCCGACGTTTGGGGGGCGGGGGGCTGTGCGCACATAATGTG
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGG-TGTGCGCACATGATGTG
*
20685 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
20750 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* ** *
20815 GGGGACACTTTTTTCAAATGGTCAGAAAATTTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * *
20880 GGCACGCCAACAAAAATACAAGGATCACATCTACCAACTTTGGGGCCAAAACTCCTTCTGAACAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
* *
20945 ATTTTAAAAAAATCTCGAACCGTAAAAAGTGTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
453 ATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
21010 TGCCATGAAACCTCAGATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
21075 ATTGGCATGGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTA
583 ATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * *
21140 CGCATCCCGCCTCTCTGGCCGGTGTAGTG-CAGCCCACCCGC-CAGTTTCGTTGGTTGGCTTAGG
648 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTC-GTTTCGTCGGTTGGCTTAGG
*** ** * *
21203 CATATAAAGTTCATTCCCAGTCTAAGATTGGACCAGA-TGAAGGGTTGCGGTAGTAGAATCAGCA
712 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTG-AGGGTTGCGGTAGCAGGATCAGCA
* * * * *
21267 GCACATAGGGTGGGACTC-GACCGATCCCCGGCTTGTGCATCCTGCCCCTCTGGCCGACTGAGCG
776 GCACGTAGGG-GGGACCCAG-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCG
* * * * * *
21331 CCCGCACTCTCATTTTGTGGGTTGACTTTGGCATACAGAGTTCATTCTCAGTCTAA
839 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** * * * ** **
21387 GCATGCGAAGTTTGTTCTCAATGTAAGATCGGACCAGATTGAGGGTTATGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * *
21452 CTCAGGCATGTGCTGGTGCTGCAT-TTTTTCTCGCCCGAGGCACCATCGTCGGAGC-TCCACCGG
66 CTCGGGCATGTGCTGGTGC--CATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCAT-CGCCGG
* * *
21515 AGAACCTGATCGGCGGCATTGGGGTTCCGACGATTGGGGGGGAGGGGGGTGCGCGCACATGATGT
128 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGCGGGGGGTGTGCGCACATGATGT
* *
21580 GTGATGGATGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
21645 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCAATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * *
21710 TGGGGACATTTTTTTCAAATGGTCAGAAAAT-CTGTAGACTTCAAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * * *
21774 ATGCATGCCAATAAAAATAGAAGGATCACATCTACC-AGGTTGGGGCCGAAACTCCTTCTGAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
* * * *
21838 AATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAACAATAGAAAACGGGTCGTC
452 AATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* *
21903 TTGCCACGAAACTTCACATCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* **** * * * * *
21968 AATTGGCACAATAGAGATATCAAGATATACCTAAACCCACCTACCGCCCTATCGATCCACGGCTT
582 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * * * *
22033 GCCCATCCCACCTCTCTAGCCGACGTAGTGCCCGCCCGCCCGCTCATTTTGTCAGTTGGCTTACG
647 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* *
22098 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTACGGTAGCAGGATCAGCAG
712 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAG
* * * * * * *
22163 CACATAGGGGGGACACGGTCGATCCCTGACTTGCGCATCCTGCCCCCCTGGCCGGGTGAGCGCCC
777 CACGTAGGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCC
* * *
22228 GCACGCTCGTTTCGTGGGTTGACCTAGGCATGCGGAGTTCATTCCCAGTCTAC
842 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
22281 GCATACGGAGTTCATTCCCAGTGTAAGATC-GATCAGACCAAGGGTTGCGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * *
22345 CTCGGGCATGTGCTGGTGCCACATTCTTTTTCGCCTGGGGCACCATCG-CTGGAGCATCGTCGGG
66 CTCGGGCATGTGCTGGTGCCATATT-TTTTTCGCCCGGGGCACCATCGTC-GGAGCATCGCCGGA
* * * * *
22409 GTACCTAACCGGCGGCATTGGGGTTCCGATGATT----GG-AGGGGGTGTGCACACATGATGTGC
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGC
* *
22469 GATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
22534 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCGGTAGCCATTAAAGTGTTTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
22599 GGGACACTTTTTTCAAATGGTTACAAAATCCTGTACACTTCGAGCTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
22664 GCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTGTGGGGCCAAAACTCCTTCTGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
* *
22729 TTTT-AAAAAATC-CTGAACCATAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGT-GTCT
454 TTTTAAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
22791 AGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * ** *
22856 ATTGGCATGGTAGAAATATGAAGATGGGCTTAAACCCACCTGTCACCCTATCCATCCACGGCTTG
583 ATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
22921 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCACCTGCTCGTTTCGTCGGTTAGCTTAGGC
648 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * * * * * * * *
22986 ATATGGAGTTCATTCCCTGTCTAAGATCGGATCGGACCGAAGGTTGCGGCAGTAGGATCGGCAGC
713 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAGC
* * * * * *
23051 ACGTAGGGGGGACCCAGTAGATCTCCGGCTTGTGCATCCTGCCCCTCAGGCTGGCTGAGCTCCCG
778 ACGTAGGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCG
* *
23116 CACGCTCATTTCGTGGGTTGACTTA-G--TGCGGAGTTCATTCCCAGTCTAA
843 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
23165 GCATACGGAGTTCATTCCCAGTGTAAGATCGGATCGAACCGAGGGTTACAGGTGCACATGCTGGC
1 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * * * *
23230 CTCAGGCATGTGCTGGGGCCGTATTTTTTTCGCCCAGTGCACCATTGTCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
23295 ACCTGACCGGTGGCATTGGGGTTTCGATGATTGAGGGGGCGGGGGGGGTTATGCACACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATTG-GGGGGC--GGGGGG-TGTGCGCACATGATGT
** * *
23360 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTTTATCACTCATTAAACCT-GAAGAACTC
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG-AGAACTC
23424 ACA-CCCC---AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * * *
23485 ATGGGGATACTTTTTTCAAATGGTCTCAAAATCCTGCACACTTCGTGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * *
23550 TGTGCATGCCAAAAAAAAT-CAAGGATCATGTCTACCAAGTTTAGGGCCAAAACTCCTTCTGAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * * ** * *
23614 AAATTTTTAAAAAATCCCGAACCGAAAAAAGTTTTGAAAATCATGAACAATAGAAAACGAGT-GT
451 AAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* *
23678 CTTGTCATGAAACTTCACATGACGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
516 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
*
23743 GCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
581 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
23808 TGCGCATCCTGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTTGTTTCGTCGGTTGGCTTAG
646 TGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * *
23873 GCATACAGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTACGGTAGTAGGATCAGCA
711 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCA
*
23938 GCACGTAGGGGGGGACCCTGTCGATCCCCG
776 GCACGTA-GGGGGGACCCAGTCGATCCCCG
23968 ACATGCCATG
Statistics
Matches: 17267, Mismatches: 1785, Indels: 741
0.87 0.09 0.04
Matches are distributed among these distances:
846 63 0.00
847 4 0.00
848 2 0.00
849 11 0.00
850 471 0.03
851 81 0.00
852 10 0.00
854 19 0.00
855 14 0.00
856 33 0.00
858 1 0.00
861 1 0.00
862 1 0.00
864 2 0.00
865 5 0.00
866 7 0.00
867 44 0.00
868 105 0.01
869 117 0.01
870 62 0.00
871 285 0.02
872 607 0.04
873 474 0.03
874 22 0.00
875 30 0.00
876 4 0.00
877 3 0.00
878 6 0.00
879 24 0.00
880 356 0.02
881 481 0.03
882 449 0.03
883 801 0.05
884 487 0.03
885 753 0.04
886 536 0.03
887 835 0.05
888 193 0.01
889 1140 0.07
890 543 0.03
891 465 0.03
892 459 0.03
893 1750 0.10
894 755 0.04
895 1192 0.07
896 1478 0.09
897 1733 0.10
898 225 0.01
899 119 0.01
900 7 0.00
901 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (894 bp):
GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
ACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATT
TTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
CATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
CGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAGCACG
TAGGGGGGACCCAGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCAC
GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:8094 original size:26 final size:26
Alignment explanation
Indices: 8065--8117 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
8055 GTTGACTTAG
*
8065 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
* *
8091 GCATACGAAGTTCATTCCTAGTGTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
8117 G
1 G
8118 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:10743 original size:26 final size:26
Alignment explanation
Indices: 10714--10766 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
10704 GTTGACTTAG
*
10714 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
* *
10740 GCATACGAAGTTCATTCCTAGTGTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
10766 G
1 G
10767 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:11635 original size:26 final size:26
Alignment explanation
Indices: 11599--11651 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
11589 GTTGACTTAG
*
11599 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
11625 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
11651 G
1 G
11652 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13369 original size:26 final size:26
Alignment explanation
Indices: 13339--13391 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13329 GTTGACTTAG
13339 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13365 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13391 G
1 G
13392 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:14272 original size:26 final size:26
Alignment explanation
Indices: 14220--14272 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
14210 GTTGACTTAG
*
14220 GCATACGTAGTTCATTCCCAGTCTAA
1 GCATACGTAGTTCATTCCCAGGCTAA
*
14246 GCATACAG-AGTTCATTCCCAGGGTAA
1 GCATAC-GTAGTTCATTCCCAGGCTAA
14272 G
1 G
14273 GTCAGATCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGTAGTTCATTCCCAGGCTAA
Found at i:15152 original size:25 final size:26
Alignment explanation
Indices: 15101--15152 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15091 GTTGACTTAG
15101 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
15127 GCATACGGAGTTC-TTTCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15152 G
1 G
15153 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 11 0.46
26 13 0.54
ACGTcount: A:0.25, C:0.23, G:0.23, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16028 original size:26 final size:26
Alignment explanation
Indices: 15990--16042 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15980 GTTGACTTAG
* * *
15990 GCATACGGGGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
16016 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
16042 G
1 G
16043 ATCAAACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:16916 original size:26 final size:26
Alignment explanation
Indices: 16886--16938 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16876 GTTGACTTAG
16886 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
* * *
16912 GCATACGGAGTTCATTCCTAGTGTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16938 G
1 G
16939 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:22763 original size:26 final size:26
Alignment explanation
Indices: 22724--22780 Score: 69
Period size: 26 Copynumber: 2.2 Consensus size: 26
22714 CTCCTTCTGA
* **
22724 AAAAATTTTAAAAAATCCTGAACCAT
1 AAAAAGTTTAAAAAATCCTGAAAAAT
* *
22750 AAAAAGTTTCAAAAATCGTGAAAAAT
1 AAAAAGTTTAAAAAATCCTGAAAAAT
22776 AAAAA
1 AAAAA
22781 ACGAGTGTCT
Statistics
Matches: 26, Mismatches: 5, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.60, C:0.11, G:0.07, T:0.23
Consensus pattern (26 bp):
AAAAAGTTTAAAAAATCCTGAAAAAT
Found at i:24447 original size:516 final size:515
Alignment explanation
Indices: 23459--24455 Score: 1433
Period size: 516 Copynumber: 1.9 Consensus size: 515
23449 ACAGGTTTGC
* * *
23459 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGATACTTTTTTCAAATGGTCTCAAAATCCTGCAC
1 TGCCAATAGCCATTAAAG-GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGCAC
* *
23524 ACTTCGTGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATCAAGGATCATGTCTACCAAG
65 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATCAAGGATCACGTCTACCAAG
* * ** **
23589 TTTAGGGCCAAAACTCCTTCTGAAAAAATTTTTAAAAAATCCCGAACCGAAAAAAGTTTTGAAAA
130 TGTAGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCAAAACCGAAAAAAGTTTCAAAAA
* * * * *
23654 TCATGAACAATAGAAAACGAGTGTCTTGTCATGAAACTTCACATGACGGCTTAAGGGACCATTGT
195 TCATGAAAAATAG-AAACAAGTGTCTTGCCATGAAACTTCACACGAAGGCTTAAGGGACCATTGT
** *
23719 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCAC
259 ATGAATTTACAAGCCATAAAAATGGCATTGGCACAGCAAAAATACGAAGATGTGCCTAAACCCAC
* * *
23784 CTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGACGTAGTGCCCGCCCGCC
324 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCACCCGCC
* * * *
23849 CGCTTGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGATCAGACTG
389 CGCTCGTTTCGTCGGTGGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACTA
* **
23914 AGGGTTACGGTAGTAGGATCAGCAGCACGTAGGGGGGGACCCTGTCGATCCCCGACATGCCA
454 AAGGTTACGACAGTAGGATCAGCAGCACGTAGGGGGGGACCCTGTCGATCCCCGACATGCCA
*
23976 TGCCAATAGCCATTACAA-GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTAC
1 TGCCAATAGCCATTA-AAGGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGCAC
* *
24040 ACTTCGAGTTTTTAGCTGAATCTTTTTT-TGCATGCCAACAAAAATTCAAGGATCACGTTTACCA
65 ACTTCGAGTTTTTAGCTGAAT-TTTTTTGTGCATGCCAA-AAAAAATCAAGGATCACGTCTACCA
* * * * * *
24104 AGTGTGGGGTCAAAACTCCTTGTGAAAAAATTTTAAAAAAATCTAAAACCGTAAAAGGTTTCAAA
128 AGTGTAGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCAAAACCGAAAAAAGTTTCAAA
24169 AATCATGAAAAATAG-AACAAGTCGTCTTGCCATGAAACTTCACACGAAGGCTTAAGGGACCATT
193 AATCATGAAAAATAGAAACAAGT-GTCTTGCCATGAAACTTCACACGAAGGCTTAAGGGACCATT
** * *
24233 GTATGAATTTACAAGCCATAAAAATGGCATTGTTACAGCAGAAATACGAAGATGTGCCTAAGCCC
257 GTATGAATTTACAAGCCATAAAAATGGCATTGGCACAGCAAAAATACGAAGATGTGCCTAAACCC
* *
24298 ACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCACCCG
322 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCACCCG
* * * * ** * *
24363 CCTGCTCGTTTCGTTGGTGGGCTTAGGCATACGGGGTTCATTCCCAGTCTAAGATTGGACCTGAT
387 CCCGCTCGTTTCGTCGGTGGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGAC
* *
24428 TAAAGGTTGCGACAGTAGGATCGGCAGC
452 TAAAGGTTACGACAGTAGGATCAGCAGC
24456 CCGCACTGGG
Statistics
Matches: 422, Mismatches: 54, Indels: 9
0.87 0.11 0.02
Matches are distributed among these distances:
515 6 0.01
516 305 0.72
517 109 0.26
518 2 0.00
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (515 bp):
TGCCAATAGCCATTAAAGGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGCACA
CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATCAAGGATCACGTCTACCAAGT
GTAGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCAAAACCGAAAAAAGTTTCAAAAAT
CATGAAAAATAGAAACAAGTGTCTTGCCATGAAACTTCACACGAAGGCTTAAGGGACCATTGTAT
GAATTTACAAGCCATAAAAATGGCATTGGCACAGCAAAAATACGAAGATGTGCCTAAACCCACCT
ACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCACCCGCCCG
CTCGTTTCGTCGGTGGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACTAAA
GGTTACGACAGTAGGATCAGCAGCACGTAGGGGGGGACCCTGTCGATCCCCGACATGCCA
Found at i:28982 original size:25 final size:25
Alignment explanation
Indices: 28941--28991 Score: 77
Period size: 25 Copynumber: 2.0 Consensus size: 25
28931 GTTGACTTAG
28941 GCATACGAAGTCATTCCCAGT-TAA
1 GCATACGAAGTCATTCCCAGTGTAA
*
28965 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGAAG-TCATTCCCAGTGTAA
28991 G
1 G
28992 ATCAAGACCG
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
24 9 0.38
25 11 0.46
26 4 0.17
ACGTcount: A:0.29, C:0.24, G:0.22, T:0.25
Consensus pattern (25 bp):
GCATACGAAGTCATTCCCAGTGTAA
Found at i:31243 original size:897 final size:890
Alignment explanation
Indices: 26328--32135 Score: 6978
Period size: 895 Copynumber: 6.5 Consensus size: 890
26318 GTTGACTTAG
* * *
26328 GCATACGGAGTTCATTCCTAGTGTAAGATCAGACCGAACTGAGGGTTGCAGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACTGAGGGTTGCGGGTGCACATGCTGGG
* ** *
26393 CTCA-GGCATGTGCTGGTGCCA-TTTTCTCTTTTCGTTCAGGGCACCA---T-----CA---TCG
66 CT-AGGGCATGTGCTGGTGCCACATTT-T-TTTTCACTCGGGGCACCATCGTCGGAGCATCGTCG
* * ** ** *
26445 AAGAACCTGACCGGTGGCATTCAGGTTCCGGTGATTGGGAGGGC-AGGGGGTATGCGCACATGAT
128 GAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGG-GGGCGAGGGGGTGTGCGCACATGAT
* * *
26509 GTGTGATGGGTGCTAGTACTTTGCCCTTATATTTGCCCCCTATCCCTCATCAAACCTCGAGAACT
192 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
*
26574 CACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAA
257 CACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAA
*
26639 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTCAGCTGAATTTTT
321 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * *
26704 TTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTCTGGGGCCAAAACTCTTTCTGAA
386 TTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGAGGCCAAAACTCCTTCAGAA
* * * * * *
26769 AAAATTTTTAAAAAATCCCAAACTGTAAAAGGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
451 AAAA-TTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* *
26834 TCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGATTTTACAAGCCATAAAAAA
515 TCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** * * * *
26899 GGCATTGGCACAGTAGAAATATAAAGATGTGCCTAAAGCCACCTACCACCCTATCGATCCACAGC
580 GGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCTATCGATCCACGGC
* * * * * **
26964 TTGCGCATCCCGTCTCTCTGGCTGACGTAATGCCCGCCCGCTCGCTCGTTTCGTCAGTTGGAGTA
644 TTGCGCATCCCGTCTCTCTGGCTGGCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTA
* * * * *
27029 GGCATACGGAGTTCATTCCCAATCTAAGATTGGACCAGACCGAGGGTTGCGGTAGCAAGATTGGT
709 GGCATACGGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTT--GGCAG-AAGATCGGT
* * * *
27094 AGCAC-TCAGGGGGGGACCCGGTCGATCCTCGGCTTGCGCATCCTGCCCCTTTGGCCAGCTGAGC
771 AGCACGT-A-GGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCTACCCCTCTGGCCGGCTGAGC
*
27158 GCCCGGACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
834 GCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
* * * * * * * *
27215 G-ATATGGAGTTCATT-CCAGTGTAAGAACGGATCAGACTGAGGGTTGCGAGTGCACATCCTGTG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACTGAGGGTTGCGGGTGCACATGCTGGG
* * ** * * * *
27278 TTCGGGCATGTATTGGTGTCGCATTTTTTTTTCACCCGGGGCATCATCG-CTGGAGCATCG-CTG
66 CTAGGGCATGTGCTGGTGCCACA-TTTTTTTTCACTCGGGGCACCATCGTC-GGAGCATCGTC-G
** * **
27341 GAGAACCTGACCGGTAGCAATGGGGTTCCGACGATTGGGGGGCG-GGGGGTGTGCATACATGATG
128 GAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGAGGGGGTGTGCGCACATGATG
* * * *
27405 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCATCATCAAACCTTGAGAACTC
193 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
27470 ACACCCCCTTAAAGAGCATTTGAGACTTTACAGGTTTG-TCGCTAGTAGCCATTAAAGTGTCTAA
258 ACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT-GCCAGTAGCCATTAAAGTGTCTAA
27534 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTT
321 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTT
** * * *
27599 TTGTGTGTGCCAA-AAAAATTACAAGGATCATGTCTACCAAGTTTGAGGCGAAAAATCCTTCCTG
386 TTGTGCATGCCAACAAAAA-TACAAGGATCATGTCTACCAAGTTTGAGGCCAAAACTCCTT-CAG
** * *
27663 -AAAAATTTTTAAAAATCCCGAACCGTAAAAAGTTTCCAAAAA-CGTGAAAAATAGCAAACGAGT
449 AAAAAATTTAAAAAAATCTCGAACCGTAAAAAGTTT-CAAAAATCGTGAAAAATAGAAAACGAG-
* * * *
27726 TCCGTCTTTCCATG-AGCTTCACAAGAAGGCTTAAGGGACCCATTGTCATGAATTTACATGCCAT
512 T-CGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA-CCATTGT-ATGAATTTACAAGCCAT
* * * *
27790 AAAAATTGGCATTGGCATGGTAGAAATATGAATATGTGCCTAAACCCACCTTATCACC-ACTAAG
574 AAAAA-TGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACC-TACCACCTA-T-CG
** * * * * *
27854 ATTCCACCGGCTTAAGC-TACCCGTCTCTCTGGCTGGCGTAGTGGTCCGCCCGTCCGGTTGGTTC
635 A-TCCA-CGGCTTGCGCAT-CCCGTCTCTCTGGCTGGCGTAGT-GCCCGCCCGCCCGCTCGTTTC
** *
27918 ATTTGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGAT-GG----GA-C---------C-
696 ATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTTGGCA
* ** *
27967 --AGATCGGTAGCAC-TCAGGGGGGACCCGGCCGATAGCCGGCTTGCGCATCCTGCCCCTCTGGC
761 GAAGATCGGTAGCACGT-AGGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCTACCCCTCTGGC
* * *
28029 CGTCTGAGCGCCCGCACACTCGTTTCATGGGTTGACTTAGGCATACAAAGTTCATTCCCAGTCTA
825 CGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTA
28094 A
890 A
* * * * * * ** * *
28095 GCATACGAAGTTCATTCCCAATGCAAGATCCGATCAGACCAAGGGTTACGAGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACTGAGGGTTGCGGGTGCACATGCTGGG
* * * * * * *
28160 TTCGGGCATGTGCTGGTGTCACATTTTTTTTTCACCCGAGGTACCA---TC---G---C-T-GGT
66 CTAGGGCATGTGCTGGTGCCACA-TTTTTTTTCACTCGGGGCACCATCGTCGGAGCATCGTCGGA
* * * * **
28214 GAACCTAACTGGCAGCAATGGGGTTCCGACGATTGGGGCACGAGGGGGTTGTGCGCACATGATGT
130 GAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGAGGGGG-TGTGCGCACATGATGT
28279 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
194 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
28344 CACCCCCTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCTAGTAGCCATTAAAGTGTCTAAAAT
259 CACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
* * * *
28409 GGGGACACTATTTTCAAATGGTCACAAAATCTTGTACACTTCCAGTTTTTAGCTGAATTGTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
28474 TGCATGCCAACAAAAATACAAGGATCAGGTCTACCAAGTTTGAGGCCAAAACTCCTTCTGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGAGGCCAAAACTCCTTCAGAAAAA
*
28539 AGTTTAAAAAAATCTCGAACCGTAAAAAGTTTCCAAAATCGTGAAAAATAGAAAACGAGTCGTCT
454 A-TTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
28604 TGCCATGAAACTTCACATGAAGGCTT-AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGG
518 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT-GG
*
28668 CCATTGGGCAATGGCAGAAAATATGAAGATGTGCCTAAACCCACCTACCACC-AACGATCCACGG
582 -CATT-GGC-ATGGCAG-AAATATGAAGATGTGCCTAAACCCACCTACCACCTATCGATCCACGG
* * * *
28732 CTTGCGCATCTCGTCTCTCTGGCCCGGCTGTAGTGCCCGCTCGCCCCGCTTGTTTCAATCGGTTG
643 CTTGCGCATCCCGTCTCTCTGG-CTGGC-GTAGTGCCCGCCCG-CCCGCTCGTTTC-ATCGGTTG
* * *
28797 GCTTAGGCATTACAGAGTTCATTCCTAGTC-----TA--A--AGATCAA------GC-G--GATC
704 GCTTAGGCA-TACGGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTTGGCAGAAGATC
* * ** * * * *
28844 GGTAGCACTTA-GGGGTA-CCGGTCGATCCATGGCTTGCGCATCCTAGTCCCTCTAGTCGGTTGA
768 GGTAGCACGTAGGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCTA-CCCCTCTGGCCGGCTG-
* * *
28907 AGCGACCGCACGCTCATTTCGTGGGTTGACTTAGGCATAC-GAAG-TCATTCCCAGT-TAA
831 AGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAG-AGTTCATTCCCAGTCTAA
* * *
28965 GCATACGGAGTTCATTCCCAGTGTAAGATCAAGACCGGAC-CAGGGTTTGCAGTTGCACATGCTA
1 GCATACGGAGTTCATTCCCAGTGTAAGATC-AGACCGGACTGAGGG-TTGCGGGTGCACATGCT-
* **
29029 GGGCCTCA-GGCATGTGCCTGGTGCCACTTTTTTTTTTGC-CT-GGGGCACCATCACCGGAGCAT
63 GGG-CT-AGGGCATGTG-CTGGTGCCAC-ATTTTTTTT-CACTCGGGGCACCATCGTCGGAGCAT
*** ** *
29091 TACCGGAGAACCTGA-C--CGG---TGGGGTTCCGGTGATTAGAGGGGCGGAGGGGGTGTGCGCA
123 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATT-GGGGGGC-GAGGGGGTGTGCGCA
* *
29150 CATGATGTGCGATGGGTGCTGGTATTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
186 CATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* * *
29215 AGAACTCACACGCCATTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAAT
251 AGAACTCACAC-CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* *
29280 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTTGCTGA
315 GTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGA
* * *
29345 ATGTTTTTGTGCATGCCAACAAAAATACAAGGATCATGCCTACCAAGTTTG-GTGCGAAAACTCC
380 ATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGAG-GCCAAAACTCC
* * * * * *
29409 TTCAGGTAAAATTTTAAAAAAATTTTGAACCGTAAAAAGTTTCAAAGATCGTGAAAAATAGGAAA
444 TTCA-GAAAAAATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
*
29474 CGAGTCGTCTTGCCATGAAAGTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
508 CGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
** * * *
29539 TAAAAATGGCATTGGCACAGTAAAAATATGAAGATGTGCCTAAAGCCACCTACCAGCCTATCGAT
573 TAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCTATCGAT
* * ** * * * **
29604 CCACGGCTTGCGCATCCCGCCTCTCTAGCCAGCGTAATACCCGCCCGCCCGCTTGTTTTGTCGGT
637 CCACGGCTTGCGCATCCCGTCTCTCTGGCTGGCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGT
* * * *
29669 TGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCAAGGGTTGTAGCAGTAG
702 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTTG--GCAG-AA
* * * * **
29734 GATTGGTAGCACGTAGGGGGGACCCGATCGATCCCCGGCTTGCGCATCTTGCCCCTCTGGTTGGC
764 GATCGGTAGCACGTAGGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCTACCCCTCTGGCCGGC
* * * * *
29799 TGAGCGCTCGCACGCTCGTTTCATGGGTTGACTTAGGCATGCGGACTTCATTCCCAATCTAA
829 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
* * * *
29861 GCATATGGAGTTCATTCCTAGTGTAAGATCAAACCGGACTGAGGGTTGCAGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACTGAGGGTTGCGGGTGCACATGCTGGG
* * **
29926 CTCGGGCATGTGTTGGTGCCACATTTTTTTTCACTCGGGGCACCATCGTCGGAGCATCACCGGAG
66 CTAGGGCATGTGCTGGTGCCACATTTTTTTTCACTCGGGGCACCATCGTCGGAGCATCGTCGGAG
* * *
29991 AACCTGACCGACGGCGTTGGGGTTCCAACGATTTGGGGGGCGAAGGGGGGGTGTGCGCACATGAT
131 AACCTGACCGGCGGCATTGGGGTTCCGACGA-TTGGGGGGCG-A--GGGGGTGTGCGCACATGAT
*
30056 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCACCTATCCCTCATCAAACCTCGAGAACT
192 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
30121 CACACCCAATTAAAGAGCATTTGAGATTTTACAGGTTTGCTACTAGTAGCCATTAAAGTGTCTAA
257 CACACCC-CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAA
*
30186 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
321 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
30251 TTATGCATGCCAACAAAAATACAAGGATCAGGTCTACCAAGTTTGAGGCCAAAACTCCTTCTGAA
386 TTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGAGGCCAAAACTCCTTCAGAA
*
30316 AAAATTTAAAAAAAATCTCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
451 AAAATTT-AAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* *
30381 TCTTGCCATGAAACTTCACATCAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAAT
515 TCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
30446 GGCATTGGCATGGCAGAAATATGAAGATGTTCGTAAACCCACCTACCACTCTATCGATCCACGGC
580 GGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAC-CTATCGATCCACGGC
* * *
30511 TTGCGCATCCCGCCTCTCTAG-TCGGCGTAGTGCCCGCCCGCCTGCTCGTTTCATCGGTTGGCTT
644 TTGCGCATCCCGTCTCTCTGGCT-GGCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTT
*
30575 AGGCACACGGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTTCGGGCAGAAAGATCGG
708 AGGCATACGGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTT--GGCAG-AAGATCGG
* * *
30640 CAGCACGTAGGGGGGGACCTGGTCGATCCCCGGCTTGCCCATCCTACCCCTCTGGCCGGCTGAGC
770 TAGCACGTA-GGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCTACCCCTCTGGCCGGCTGAGC
* * * * *
30705 GCCCGCACGCTCTTTTCGTGGGTTGACTTAGGAATACAGAGTTCATTCCCAGTATAT
834 GCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
* *
30762 GCATACGGAGTTCATTCCCAGTGTAAGATCAGATCGGA-TCGAGGGTTCCGGGTGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACT-GAGGGTTGCGGGTGCACATGCTGG
*
30826 GCTAGGGCATGTGCTGGTGCCACATTTTTTTTCGCTCGGGGCACCATCGTCGGAGCATCGTCGGA
65 GCTAGGGCATGTGCTGGTGCCACATTTTTTTTCACTCGGGGCACCATCGTCGGAGCATCGTCGGA
* * *
30891 GAACCTAACTGGCGGCATTAGGGTTCCGACGATTGGGGGGCGAGGGGGTGTGCGCACATGATGTG
130 GAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGAGGGGGTGTGCGCACATGATGTG
* *
30956 TGATGGGTGCTGGTACTCGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTTC-AGAACTCA
195 TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAACTCA
* * **
31020 CAGCCCCTTAAAAAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGAA
259 CA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
* * *
31085 TGAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTATAGCTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
31150 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-ACGACCAAAACTCCTTCAAAAA
388 GTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGA-GGCCAAAACTCCTTCAGAAA
* * * * *
31214 AAATTTAAAAAAAATATGGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAATCGAGTCGT
452 AAATTT-AAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * * * *
31279 CTTGCCTTGAAACTTCACATGAAGGCTTAAGGGACCACTATATCAATTTGCAAGCCATAAAAATG
516 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
31344 GCATTGACATGGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAACTACGGCT
581 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCTATCGATCCACGGCT
* * * * * **
31409 TGTGCATCCCGTTTCTCTGGCTGGCATAGTGCCCGCCCACCCACTCGTTTTGTCGGTTGGCTTAG
645 TGCGCATCCCGTCTCTCTGGCTGGCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAG
* * * * * * *
31474 GTATACGGAGTTCATTCCCAGTCTAACATTGGACCGGACCGAGTGTTACGGTAGCAAGATCGGTA
710 GCATACGGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTT--GGCAG-AAGATCGGTA
* * * * * * *
31539 GCATGTA-GGGGAACCCAGTCAATCCCCGGTTTGTGCATCCTACCTCTCTGGCCGGCTGAGCGCC
772 GCACGTAGGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCTACCCCTCTGGCCGGCTGAGCGCC
*
31603 CGCACACTCGTTTCATGGGTTGACTTAGGCATAC-GAAGTTCATTCCCAGTCTAA
837 CGCACGCTCGTTTCATGGGTTGACTTAGGCATACAG-AGTTCATTCCCAGTCTAA
* *
31657 GCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACTGAGGGTTGTGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACTGAGGGTTGCGGGTGCACATGCTGGG
* ** * ** *
31722 CTTGGGCATGTGCTGGTGCCGTATTTTTTTTCACCCGGGGCACCATCCCCGGAGCGTCGTCGGAG
66 CTAGGGCATGTGCTGGTGCCACATTTTTTTTCACTCGGGGCACCATCGTCGGAGCATCGTCGGAG
* * *
31787 AACCTGATCGGTGGCATTGGGCTTCCGACGATTGGGGGGACG-GGGGGTGTGCGCACATGA--TG
131 AACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGG-CGAGGGGGTGTGCGCACATGATGTG
* *
31849 TGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
195 TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
31914 ACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
260 A-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
* * *
31979 GGGGACACTTTTTTCAAAAGGTCACAAAATCCTGTACACTTTGAGTTTTTAACTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * ** ** *
32044 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAGACCAACTGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGAGGCCAAAACTCCTTCAGAAAAA
* **
32109 TTTTTTCAAAAATCTCGAACCGTAAAA
454 -ATTTAAAAAAATCTCGAACCGTAAAA
32136 TTGTATGAAT
Statistics
Matches: 4269, Mismatches: 497, Indels: 304
0.84 0.10 0.06
Matches are distributed among these distances:
867 1 0.00
868 23 0.01
869 40 0.01
870 83 0.02
871 122 0.03
872 285 0.07
873 191 0.04
874 33 0.01
875 12 0.00
876 44 0.01
877 9 0.00
878 48 0.01
879 92 0.02
880 364 0.09
881 69 0.02
882 85 0.02
884 9 0.00
885 65 0.02
886 14 0.00
887 4 0.00
890 3 0.00
891 11 0.00
892 43 0.01
893 264 0.06
894 106 0.02
895 601 0.14
896 117 0.03
897 564 0.13
898 66 0.02
899 20 0.00
900 561 0.13
901 268 0.06
902 52 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACTGAGGGTTGCGGGTGCACATGCTGGG
CTAGGGCATGTGCTGGTGCCACATTTTTTTTCACTCGGGGCACCATCGTCGGAGCATCGTCGGAG
AACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCGAGGGGGTGTGCGCACATGATGTGT
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGG
GGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGAGGCCAAAACTCCTTCAGAAAAAAT
TTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
CATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTATCGATCCACGGCTTGCGCA
TCCCGTCTCTCTGGCTGGCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATAC
GGAGTTCATTCCCAGTCTAAGATAGGACCAGACCAAGGGTTGGCAGAAGATCGGTAGCACGTAGG
GGGGACCCGGTCGATCCCCGGCTTGCGCATCCTACCCCTCTGGCCGGCTGAGCGCCCGCACGCTC
GTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
Found at i:31661 original size:26 final size:26
Alignment explanation
Indices: 31631--31683 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
31621 GTTGACTTAG
31631 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
* *
31657 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
31683 G
1 G
31684 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:32510 original size:26 final size:27
Alignment explanation
Indices: 32470--32522 Score: 99
Period size: 26 Copynumber: 2.0 Consensus size: 27
32460 CATGGGTTGA
32470 CTAAGGCATACGGAGTTCATTCCCAGT
1 CTAAGGCATACGGAGTTCATTCCCAGT
32497 CTAA-GCATACGGAGTTCATTCCCAGT
1 CTAAGGCATACGGAGTTCATTCCCAGT
32523 GTAAAATCGG
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
26 22 0.85
27 4 0.15
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (27 bp):
CTAAGGCATACGGAGTTCATTCCCAGT
Found at i:32832 original size:844 final size:842
Alignment explanation
Indices: 31297--32978 Score: 2409
Period size: 843 Copynumber: 2.0 Consensus size: 842
31287 GAAACTTCAC
* *
31297 ATGAAGGCTTAAGGGACCACTATATCAATTTGCAAGCCATAAAAATGGCATTGACATGGCAAAAA
1 ATGAAGGCTTAAGGGACCACTATATCAATTTACAAGCCATAAAAAAGGCATTGACATGGCAAAAA
* * * ***
31362 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAACTACGGCTTGTGCATCCCGTTTCTCT
66 TATGAAGATGTGCCTAAACCCACCAACCACCCTATCGAACCACGGCTTGCGCATCCCACCTCTCT
* ** * *
31427 GGCTGGCATAGTGCCCGCCCACCCACTCGTTTTGTCGGTTGGCTTAGGTATACGGAGTTCATTCC
131 GGCCGGCATAGTGCCCGCCCACCCACTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCC
** * * ** *
31492 CAGTCTAACATTGGACCGGACCGAGTGTTACGGTAGCAAGATCGGTAGCATGTAGGGGAACCCAG
196 CAGTCTAACATCAGACCGGACCGAGGGTTACGGCAGCAAGATCGGTAGCACATAGGGGAACCCAC
* * * * * *
31557 TCAATCCCCGGTTTGTGCATCCTACCTCTCTGGCCGGCTGAGCGCCCGCACACTCGTTTCATGGG
261 TCAATCCCCGGCTTGCGCATCCTACCCCTCTAGCCGACTGAGCGCCCGCACACTCATTTCATGGG
* *
31622 TTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATC
326 TTGACTAAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAAATC
* * * * * *
31687 GGACCGGACTGAGGGTTGTGGGTGCACATGCTGGGCTTGGGCATGTGCTGGTGCCGTATTTTTTT
391 GGACCGAACCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTCGTGCCGCATTTTTTT
* * * * * ** *
31752 TCACCCGGGGCACCATCCCCGGAGCGTCGTCGGAGAACCTGATCGGTGGCATTGGGCTTCCGACG
456 TCACCAGGGGCACCATCACCGGAGCATCATCGGAGAACCTGACCGACGGCATTGGGCTTCCGACA
31817 ATTGGGGGGACGGGGGGTGTGCGCACATGATGTGATGGGTGCTGGCACTTGGCCCTTATATTGGC
521 ATTGGGGGGACGGGGGGTGTGCGCACATGATGTGATGGGTGCTGGCACTTGGCCCTTATATTGGC
* * * *
31882 CCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGT
586 CACCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGT
*
31947 TTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAAAGGTCACAAAATCCT
651 TTGCTGCCAGTAGCAATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAAAGGTCACAAAATCCT
* *
32012 GTACACTTTGAGTTTTTAACTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTA
716 GTACACTTCGAGTTTTTAACTGAATTTTTTTGTGCATGCC-AAAAAAATACAAGGATCACGTCCA
* * * * ** *
32077 CCAAGTTTGGGGCCAAAAGACCAACTGAAAAATTTTTTCAAAAATCTCGAACCGTAAAATTGT
780 CCAAGTTTGGGGCAAAAACACCAACTCAAAAAATTTTAAAAAAATCTCGAACCATAAAATTGT
* * * * * *
32140 ATGAATGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAAGGCATTGGCATGGCAGAAA
1 ATGAAGGCTTAAGGGACCACTATATCAATTTACAAGCCATAAAAAAGGCATTGACATGGCAAAAA
* *
32205 TATGAAGATGTTCCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCT
66 TATGAAGATGTGCCTAAACCCACCAACCACCCTATCGAACCACGGCTTGCGCATCCCACCTCTCT
* **
32270 GGCCGGCGTAGTGCCCGCCTGCCCACTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCC
131 GGCCGGCATAGTGCCCGCCCACCCACTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCC
* * * ** * * *
32335 TAGTCTAACATCAGATCGGA-TGAAGGGTTGTGGCAGCAGGATCTGTAGCACATAGGGGGGACCC
196 CAGTCTAACATCAGACCGGACCG-AGGGTTACGGCAGCAAGATCGGTAGCACATA-GGGGAACCC
* * *
32399 GACT-GATCCCTGGCTTGCGCATCCTACCCCTCTAGCCGACTGAGCGCCCGCACGCTCATTTCAT
259 -ACTCAATCCCCGGCTTGCGCATCCTACCCCTCTAGCCGACTGAGCGCCCGCACACTCATTTCAT
*
32463 GGGTTGACTAAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAA
323 GGGTTGACTAAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAA
32528 ATCGGACCGAACCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTCGTGCCGCA-TTT
388 ATCGGACCGAACCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTCGTGCCGCATTTT
* * *
32592 TTTTCGCCAGGGGCACCATCACCGGAGCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCG
453 TTTTCACCAGGGGCACCATCACCGGAGCATCATCGGAGAACCTGACCGACGGCATTGGGCTTCCG
** * *
32657 ACAATTGGGGGGGTGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
518 ACAATTGGGGGGACGGGGGGTGTGCGCACATGATGT--GATGGGTGCTGGCACTTGGCCCTTATA
*
32722 TTGG-CACCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAATGAGCATTTGAGATTTTA
581 TTGGCCACCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * * *
32786 CAAGTTTGCTGTCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCTAATGGTCACAAA
646 CAAGTTTGCTGCCAGTAGCAATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAAAGGTCACAAA
** *
32851 ATCCTGTACACTTCGAGTTTTTAGTTGAATTTTTTTGTGCATGCCAAAAAAATACAAGGATCATG
711 ATCCTGTACACTTCGAGTTTTTAACTGAATTTTTTTGTGCATGCCAAAAAAATACAAGGATCACG
* **
32916 TCCACCAAGTTTGGGGCAAAAACTCCTTCTCAAAAAATTTTAAAAAAATCTCGAACCATAAAA
776 TCCACCAAGTTTGGGGCAAAAACACCAACTCAAAAAATTTTAAAAAAATCTCGAACCATAAAA
32979 AGTTTCAAAA
Statistics
Matches: 737, Mismatches: 97, Indels: 10
0.87 0.11 0.01
Matches are distributed among these distances:
842 1 0.00
843 371 0.50
844 333 0.45
845 32 0.04
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (842 bp):
ATGAAGGCTTAAGGGACCACTATATCAATTTACAAGCCATAAAAAAGGCATTGACATGGCAAAAA
TATGAAGATGTGCCTAAACCCACCAACCACCCTATCGAACCACGGCTTGCGCATCCCACCTCTCT
GGCCGGCATAGTGCCCGCCCACCCACTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCC
CAGTCTAACATCAGACCGGACCGAGGGTTACGGCAGCAAGATCGGTAGCACATAGGGGAACCCAC
TCAATCCCCGGCTTGCGCATCCTACCCCTCTAGCCGACTGAGCGCCCGCACACTCATTTCATGGG
TTGACTAAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAAATC
GGACCGAACCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTCGTGCCGCATTTTTTT
TCACCAGGGGCACCATCACCGGAGCATCATCGGAGAACCTGACCGACGGCATTGGGCTTCCGACA
ATTGGGGGGACGGGGGGTGTGCGCACATGATGTGATGGGTGCTGGCACTTGGCCCTTATATTGGC
CACCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGT
TTGCTGCCAGTAGCAATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAAAGGTCACAAAATCCT
GTACACTTCGAGTTTTTAACTGAATTTTTTTGTGCATGCCAAAAAAATACAAGGATCACGTCCAC
CAAGTTTGGGGCAAAAACACCAACTCAAAAAATTTTAAAAAAATCTCGAACCATAAAATTGT
Found at i:33402 original size:26 final size:26
Alignment explanation
Indices: 33351--33402 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
33341 TTGACTTAGT
*
33351 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACGGAGTTCATTCCCAATCTAAG
* *
33377 CATACGGAGTTCCTTCCCAATGTAAG
1 CATACGGAGTTCATTCCCAATCTAAG
33403 ATCAGACCAG
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.27, G:0.19, T:0.27
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAATCTAAG
Found at i:36712 original size:26 final size:26
Alignment explanation
Indices: 36660--36712 Score: 61
Period size: 26 Copynumber: 2.0 Consensus size: 26
36650 GTTGACTTAG
** *
36660 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCAAACCCAGTCTAA
* *
36686 GCATACGGAGTTCAAACCCAGTGTAA
1 GCATACGAAGTTCAAACCCAGTCTAA
36712 G
1 G
36713 ATCGGATCAG
Statistics
Matches: 22, Mismatches: 5, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.23, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGAAGTTCAAACCCAGTCTAA
Found at i:38441 original size:26 final size:26
Alignment explanation
Indices: 38405--38457 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
38395 GTTGACTTAG
*
38405 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
38431 GCATACAGAGTTCATTCCTAGTGTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
38457 G
1 G
38458 ATCAGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Done.