Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168035.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_288, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 38757
ACGTcount: A:0.26, C:0.24, G:0.23, T:0.27
Found at i:705 original size:26 final size:26
Alignment explanation
Indices: 667--719 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
657 CCAGTCCGAT
* * *
667 CTTACACTGGGAATGATCTTCGTATG
1 CTTACACTCGGAATGAACTCCGTATG
*
693 CTTAGACTCGGAATGAACTCCGTATG
1 CTTACACTCGGAATGAACTCCGTATG
719 C
1 C
720 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.23, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTACACTCGGAATGAACTCCGTATG
Found at i:2146 original size:18 final size:17
Alignment explanation
Indices: 2100--2153 Score: 65
Period size: 17 Copynumber: 3.2 Consensus size: 17
2090 TTTTTAAGAC
* *
2100 TTTGGATTTTAAGAGGT
1 TTTGGATTTTTAGGGGT
*
2117 TTT-GAATTTTAGGGGAT
1 TTTGGATTTTTAGGGG-T
2134 TTTGGATTTTTAGGGGT
1 TTTGGATTTTTAGGGGT
2151 TTT
1 TTT
2154 AAAAACTTAG
Statistics
Matches: 31, Mismatches: 4, Indels: 4
0.79 0.10 0.10
Matches are distributed among these distances:
16 9 0.29
17 11 0.35
18 11 0.35
ACGTcount: A:0.19, C:0.00, G:0.30, T:0.52
Consensus pattern (17 bp):
TTTGGATTTTTAGGGGT
Found at i:2573 original size:26 final size:25
Alignment explanation
Indices: 2539--2596 Score: 71
Period size: 25 Copynumber: 2.3 Consensus size: 25
2529 ATGCGTAAAT
**
2539 ATAAAAATATACTTAAAATTAGAAAA
1 ATAAAAATATA-AAAAAATTAGAAAA
*
2565 ATAATAATATAAAAAAATTAGAAAA
1 ATAAAAATATAAAAAAATTAGAAAA
*
2590 TTAAAAA
1 ATAAAAA
2597 AAAATTTTTT
Statistics
Matches: 27, Mismatches: 5, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
25 17 0.63
26 10 0.37
ACGTcount: A:0.69, C:0.02, G:0.03, T:0.26
Consensus pattern (25 bp):
ATAAAAATATAAAAAAATTAGAAAA
Found at i:3550 original size:11 final size:11
Alignment explanation
Indices: 3536--3564 Score: 58
Period size: 11 Copynumber: 2.6 Consensus size: 11
3526 TATTTTTCTT
3536 TTTTTTTTTAA
1 TTTTTTTTTAA
3547 TTTTTTTTTAA
1 TTTTTTTTTAA
3558 TTTTTTT
1 TTTTTTT
3565 GTATTATTTT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 18 1.00
ACGTcount: A:0.14, C:0.00, G:0.00, T:0.86
Consensus pattern (11 bp):
TTTTTTTTTAA
Found at i:3575 original size:14 final size:13
Alignment explanation
Indices: 3557--3597 Score: 55
Period size: 13 Copynumber: 3.0 Consensus size: 13
3547 TTTTTTTTTA
3557 ATTTTTTTGTATT
1 ATTTTTTTGTATT
*
3570 ATTTTTTCGTATTT
1 ATTTTTTTGTA-TT
3584 ATTTTCTTTGTATT
1 ATTTT-TTTGTATT
3598 TCGTATAATA
Statistics
Matches: 24, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
13 10 0.42
14 9 0.38
15 5 0.21
ACGTcount: A:0.15, C:0.05, G:0.07, T:0.73
Consensus pattern (13 bp):
ATTTTTTTGTATT
Found at i:4703 original size:26 final size:26
Alignment explanation
Indices: 4674--4752 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
4664 CCGGTCTGAT
*
4674 CTTACACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
4700 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
4726 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
4752 C
1 C
4753 CTAAGTCAAC
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.29, C:0.22, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:6544 original size:26 final size:26
Alignment explanation
Indices: 6494--6546 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
6484 CCGGTCCGAT
*
6494 CTTACACTGGGAATGAATTTCGTATG
1 CTTACACTGGGAATGAATCTCGTATG
*
6520 CTTAGACTGGGAATGAA-CTCTGTATG
1 CTTACACTGGGAATGAATCTC-GTATG
6546 C
1 C
6547 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 2 0.08
26 22 0.92
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTACACTGGGAATGAATCTCGTATG
Found at i:7250 original size:893 final size:893
Alignment explanation
Indices: 3815--26547 Score: 20927
Period size: 893 Copynumber: 25.1 Consensus size: 893
3805 CTTACACTAA
** * * *
3815 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAAAAAGCGTACGGGCGATCAACC-AGCCAGAG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGA-CCAGAG
* ** * * * * * *
3879 GGGCAGAATGCACAAGTTGGGGATCGATCGAGTCCCCCTTGCATGCTG-TCGATCCTGCTATCGC
65 GGGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCT-GATCCTGCTGTCAC
* * * * *
3943 AACCCTCGGTCCGATCCGATCTTAGACTGGGAGTGAACTCCGTATGCCTAAGCCAACCGATGAAA
129 -ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
4008 TGAGCGAGCGGACGGGCACTACGTCGGCCAGAGAGGC-AGGATGCGCAAGCCGTGGATCGATAGG
193 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGA-GATGCGCAAGCCGTGGATCGATAGG
* *
4072 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTATAGCTTGTA
257 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTA
* *
4137 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTTGTTTTCCATT
322 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * ** *
4202 TTTCATGATTTTCGAAACTTTTTACGGTTTGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTATG
387 TTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTG
* * *
4267 GCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAATAATTCAGCTAAAA
451 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
4332 ACTTGAAGTGTACAGGATTTTGTGACCATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGG
516 ACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * * * *
4397 CTACTGGTAGCAAACCTATAAAATCTCAGATACTCTTTAAGGGGGTGTGAGTTCTCAAGGTTAGA
581 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * *
4462 TGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCGTCGCACATCATGTGTGCACACC
646 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--
* * * * *
4527 CCCCCCGCCCGCCAATCGCCGGAA-CCCAATGCCGCCAGTCAGGTTCTCCGACGATGCTCCGGTG
709 CCCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCG
* * ** * * *
4591 ATGGTGCCCCGAG-TGAAAAAAATGCGGCACGAGCATATGCCCGAGCCCAGCATGTGTACCCGCA
774 ATGGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCA
* *
4655 ATCCTTGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAAACTGGGAATGAACTC
839 A--C-----CC--TC-G---GT-C-C---G---G---TCCG-AT-CTTACACTGGGAATGAACTC
*
4720 CGTATGCTTAAACTGG
878 CGTATGCTTAGACTGG
* * * * **
4736 GAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCAGGCGCTTAACCGGTCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * *
4801 GGCA-GATGCACAAGCCGGAGATCGGTCGAGTTCCCCCTGTGTGTTGCTGATCCTGCTGCCACAA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTCAC-A
** * * * **
4865 TGCTCTGTTTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATGGACGAAACG
130 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * * *
4930 AGCGGGCAGACGGACACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
195 AGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTG
*
4995 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATTCCAATGCCATTTTTTATGGCTTGTAAA
260 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA-TTTTTATGGCTTGTAAA
* *
5060 TTCATACAATGGGTCCCTTAAGCCTTCATGTG-AGTTTCATGGAAAGACCGACTCGTTTCCTATT
324 TTCATACAAT-GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA-CGACTCGTTTTCTATT
** * *
5124 TTTCACGA-TTTTGAAACTTTTTATAGTTCAGGATTTTTTTAAAATTTTTTCGGAAGGAGATTTG
387 TTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTG
* *
5188 GCCCCAAACTTGGGTAGACGTGATCCCTTGTTATTTTT-TGGGCATGCACAAAAACATTCAGCTA
451 GCCCCAAACTT-GGTAGACGTGAT-CCTTG-TATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
5252 AAAACTGCGAAGTGGTACAGGATTTTGTGA-CATTTGAAAAAAGTGT-CCCATTTTAGGCAACCT
513 AAAACT-CGAAGT-GTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC-A-CT
* *
5315 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC-CTTTATGGAGGGTGTGAGTTCTGT
574 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG-GGGTGTGAGTTCT-C
*
5379 GAGGTTTGATGTGAGGGATAGGGGGCTAATATAAGGGCCAAGTA-CAGCACCCATCGCACATCAA
637 GAGGTTTGA--TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC-A
* * * * ** *
5443 TGTGC-CTACACCCTCCACCCCCCAATCGCCGGAACCTCAATGCCACCGATCAGGTTCTCCGACG
699 TGTGCGC-ACACCCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
* * * *
5507 ATGCTCCGGCGATGGTGCC-CTGGGCGAAAAAAAATGCAGCACCAGCACATGCCTGAGCCTAGCA
763 ATGCTCCGGCGATGGTGCCTC-GGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * ** * * *
5571 TCTACACTCACAATGCTCGGTCCGATCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGATT
827 TGTGCACCCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACT
5636 GG
892 GG
* * * ** * * *
5638 GAATGAACTTCATATGCCTAAGTCAACCCAAGAAACGAGCGTATGGGCGGTCACCCGGCCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* ** *** * * * *
5703 GGTAGGATGCACAAGTTGGGGATCAACCGGGTCCCCCCTGCATGTTGCTAATCCTGCTATCGTA-
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTC--AC
* * * *
5767 ACCCTCGGTTTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTCAGCCAACCGACAAAAC
129 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* *
5832 GAGCGGGCGGGCGGGCGCAACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGT
194 GAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGT
* **
5897 GGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCTGTGCCAATGCCATTTTTATGGCTTGTAAA
259 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAA
*
5962 TTCATACAATGGTACCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
324 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * ** **
6027 TCATGATTTTTGAAACTTTTTATGGTTTCA-GA-TTTTTTAAAATTTTTT--TTAGGAGTTTTCA
389 TCACGATTTTTGAAACTTTTTACGG-TTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGG
* *
6088 CCCCAAACTTGGTAGACGTGACCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAA
452 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
6153 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGATACTTTAATGGC
517 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* ** *
6218 TACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGATTTTTAAT
582 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* *
6283 GAGGGATAGGGGGCCAATATAATGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACACCC
647 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * * * * ** **
6348 CCTGCCCCCCAATCGTCGAAACCCTAATGCCGTCAGTCAGGTTTTTCGGTGATGCTCCAACGATG
712 CCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATG
* * * * * *
6413 GTGCCTCGGGCAAAAAAAAATGCAGCACCAGCACTTGCCCGAGCCCAACAAGTGCACCCACAAGC
777 GTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAACC
* * *
6478 CTCGATCCGGTCCGATCTTACACTGGGAATGAATTTCGTATGCTTAGACTGG
842 CTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* ** * *
6530 GAATGAACTCTGTATGCCTAAGTCAACCCATAAAACAAGCGTGCGGGCGCTCAGTCGACCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * ** * * * * *
6595 GACAGCATGCGCAAGTTGGGGTTCAGTCGGGTCCCCTCCTACATGCTGCTGATCTTGCTGTCACA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCC-CCTGCGTGCTGCTGATCCTGCTGTCACA
* **
6660 CCTTCAATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
130 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * *
6725 AGTGGGC-GGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCTGTGAATCGATAGGGTG
195 AGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTG
6789 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAAT
260 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAAT
6854 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
325 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
** * * *
6919 CACGATTTTCAAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTTAGAAGGATTTTTGTCC
390 CACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGATTTTGGCCC
* *
6984 CAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTT
455 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
7049 GAAGTTTACAGGATTTTGTGAACATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
520 GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
7114 TGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGGG
585 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * * *
7179 GGATATGTGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCATATCATGTGCGCACACCCCCC
650 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * *
7244 GCCCCCCAATCGCCGGAACCCTAATGCCG-CAGGTCAAGTTCTCCGACGATGCTCCGGTGATGGT
715 GCCCCCCAATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATGCTCCGGCGATGGT
* * * * *
7308 GCC-CTGCGCGAAAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCACCTGTAAC
779 GCCTC-GGGC-AAAA-AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAAC
* * * * * ** *
7372 CCTCGATCTGGTCTGATCTTAAACTAGGAATGAACTATGTATGCTTAGACTGA
841 CCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* ** * *
7425 GAATGAACTCCGTACGCCTAAGTCAACCCACGAAACGAGCGCACAGGCGCTCAGCCGGCCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * * *
7490 GGCAAGATGCACAAGCCGGGGATCGGTTGGGTCCTCCCTGCATGCTACCGATCTTGCTATTGT-A
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGC---TGTCA
* ** * * *
7554 -ACCCTCAGTCTGGTCCAATCATAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAA
128 CACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
7618 CGAGCGGGCGGGCGGACACCACGCCGGCCAGAAAGGCGTGATGCGCAAGCCGTGGATCTATAGGG
193 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGG
* * *
7683 TGGTAGGTGCGTTTAGGCACATCTTCATATTTCTACCAAGCCAATGCCATTTTTATGGCTTGTAA
258 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAA
* * * *
7748 ATTCATACAACGGTCCCTTAAGCCTTCATGTGAATTTTCATGGCAAGGCGACTTGTTTTCTATTT
323 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * *
7813 TTCATGATTTTTGAAAGTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGT
388 TTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGG
*
7878 CCCCAAACTTGGAAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
452 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
7943 CTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG-CCCCTATTTTAGACACTTTAATGA
517 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCC-ATTTCAGACACTTTAATGG
* * * * **
8007 CTACTGGCAACAAACTTGTAAAATCTCAAATGCTATTCAAGGGGAAGTGAGTTCTCGAGGTTTGA
581 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* **
8072 TGAGGGATAGGGGGCCAACATAAGTTCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
646 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--
* ** * * *
8137 CCCCCCCCGCCCCCAATCACCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGATCCGAC
709 CCCCCCGC-CCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGC
* * * * *
8202 GATGGTGCCTTGGACGAAAAAAAAATGCAGCACCAGCACATGCTCGAGCCCAGTATGTGCACCCG
773 GATGGTGCCTCGGGC-AAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCG
* * *
8267 CAACCCTTGGTCTGGTCCGATCTTACACTAGGAATGAACTCCGTATGCTTAGACTGG
837 CAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
8324 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGTCGGCTAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * ** * * *
8389 GGTAGGATGCACAAGCCAGGGATCGGAGGGGTCCCCCCTGTGTGCTGCCGATCCTGCTGCCACAA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTCAC-A
* ** *
8454 CCTTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATG
130 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* ** * * * * * * *
8519 AGCGAGCGGGTAGGTACTATGCCAGCCAGAGAGGCGGGATGCACAAGCCGTGGATTGATAGGATG
195 AGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTG
*
8584 GTAGGTGGGTTTACGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAAT
260 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAAT
* * * *
8649 TCATACAATGGTCCCTTATGCCTTCATGTGAAGTTTCATGGTAAGACGACTCATTTTTTATTTTT
325 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
*
8714 CACGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTTAAAATTTTTTCAAAAGGAGTTTTGGC
390 CACGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGGC
* ** * * *
8778 CCCAAACTTGGTAGATGCAATCCTTGTATTTTT-TTAGCATGCCCAAAAAAATTCAGTTAAAAAC
453 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* * *
8842 TCAAAGTGTATAGGATTTTGTGAACATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
518 TCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
** * *
8907 ACTGGCAGCAAATATGTAAAATGTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
583 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* *
8972 AGGGATA-GGGGCCTAATATAAGGGCCAGGTACTAGCACCCATCGCACATCATGTGCGCACACCG
648 AGGGATAGGGGGCC-AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-
** * * *
9036 CCCCCAGCCCCCCAATCGTTAGAACCTCAATGCCGTCGGTCAGGTTCTCTGACGACGCTCCGGCG
710 CCCCC-GCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCG
* * * * * * *
9101 ATGGT-CCCCGGGGAGAAAAAAATGCGGCACCAGTAAATGCTCGAGCCCAGCATGTGCACCCGTA
774 ATGGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCA
* * * *
9165 ACCCTCGGTCTGGTTCGATCTTACATTGGGAATGAACTCCATATGCTTAGACTGG
839 ACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * *
9220 GAATGAACTCCGTACGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCTATAAG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * ** * * ** *
9285 GGCAGGATACGCAAGCCGGGGATCGACCGGGTACCCCCCTACGTGCT-ATCGATCCTGCTACCGC
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGT-CCCCCCTGCGTGCTGCT-GATCCTGCTGTCAC
* ** * * * *
9349 AACCCTCAGTCTGGTCCAATCTTAGACTCGCAATGAGCTTCGTATGCCTAAGCCAACCGACGAAA
129 -ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
9414 TGA----GCGGGCGGGTACTACGTCGGCCAGAGAGGCG-GAATGCGCAAGCCATGGATTGATAGG
193 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAG-ATGCGCAAGCCGTGGATCGATAGG
* * *
9474 GTGCTATGTGGGTTTAGGCACATCTTCATATTTC-GACCATGCCAATGCCATTTTTATGGCTTGC
257 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-CCATGCCAATGCCATTTTTATGGCTTGT
* *
9538 AAATTCATACAATGGTCCCTTATGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTAT
321 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
**
9603 TTTTCACGATTTACGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTT
386 TTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTT
* * * * * *
9668 GACCCCGAACTTGGTAGACGCGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGTTAAA
450 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* * * *
9733 AACTTGAAGTGTATAGGATTTTGTGCCCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATG
515 AACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
9798 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
580 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* *
9863 ACGAGGGATAGGGGGCCAATATAAGGAG-CAAGTACCAGCACCCATCGCACATCTTGTGCGCACA
645 ATGAGGGATAGGGGGCCAATATAAGG-GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * *
9927 CCCCCTGCCCCCCCAATCG-CTGGAACCACAATGCCGCCGGTCAGG---T-------T-CTCCGG
709 CCCCCCG-CCCCCCAATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGG
* * * *
9980 CGATGGTGCCCCGAG-AGAAAAAAAATGCGGCACCATCACATGCCTGAGCCCAGCATGTGCACCC
772 CGATGGTGCCTCGGGCA-AAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCC
* ** * *
10044 GCAACCCTTGGTCTAGTCCGATCTTGA-ACTGGGAATAAACTTCGTATGCTTAGACTGG
836 GCAACCCTCGGTCCGGTCCGATCTT-ACACTGGGAATGAACTCCGTATGCTTAGACTGG
**
10102 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAATAAGCGTGCGGGCGCTCAGCC-AGCCAGAG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGA-CCAGAG
* * * *
10166 GGGCAGGATGCACAAGCCGAGGATTGGCCGGGTCCCCCCCTACGTGCTG-TCGATCCTGCTGTCA
65 GGGCAGGATGCACAAGCCGGGGATCGGTCGGGT-CCCCCCTGCGTGCTGCT-GATCCTGCTGTCA
* * * * * * * * * ** * ** * * *
10230 CAACCTGCGTGTACAGGAT-T-TTGTAACCATTTGAAAAAAGAGTCCCCAT--TTCAGAC-ACTT
128 CACCCT-CG-GT-CTGG-TCTGATCTTA-GACTGGGAATGA-ACTCCGTATGCCTAAGCCAAC--
** * ** *** ** **** * **** * * ** *
10290 TAATGGTTACTGGTAGCAAACCTG-TAAAATCTTAAATGCTCTTTAAG-GGGGCGTGA-GTTCTA
185 CGA-CGAAAC--G-AGCGGGCGGGCGGGCA-C-T--ACGC-CGGCCAGAGAGGCGAGATGCGCAA
** * * * * ** * **
10352 GAGGTTTGATAAGGGATAAGGG-GGCAAGATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
241 GCCG-TGGAT---CGAT-AGGGTGG-TAGGT--GGG---TTTA--GGCA--CATC-TTCAT-AT-
* ** ** ***** ** * * * ** * **
10416 TGC-GCACACCCCTCCTGCC-CCCCAATCAC-CG-GAATGC---CAATGCCGT-CGATCAGGTTC
288 TTCTGC-CATGCC-AATGCCATTTTTATGGCTTGTAAATTCATACAATG--GTCCCTTAAGCCT-
** * * * * *** * *** * * * *
10473 TCCGGTGATG-CTC-CGGTGATAGACCGAAC-CG-CACCAGATATGCCCGAGCCCAGTATGTGCA
348 TCATGTGAAGTTTCATGG-CA-AGA-CG-ACTCGTTTTC-TAT-TTTTC-A--CGA-TTTTTGAA
* * *** * * * * * * *
10534 CCAGTACCATCAG-TCTGGTCTGTATTTTTAAAATGAACTTGATCTT-AGACTGGGA--ATGACT
403 AC-TTTTTA-CGGTTCAGG-AT-T-TTTTTAAAAT----TT--T-TTCAGA--AGGATTTTGGCC
** * ** * * * ***** ** **
10595 CCGTA--TGCCTA-A-GCCAACCATGAAACGAGCGCGGGGGCCACTAGTCGACAGAGAGGCAGGA
454 CCAAACTTG-GTAGACGTGATCCTTG-TA--TTTTTGTTGG-CA-T-G-C-ACA-A-A---AAAA
* ***** ** * *** **
10656 TGCACAAGCCGTGGA-TCGATAGGGTGGT-GTGGGTTTTAG-GAACATCTCATATTTCTACCA-T
505 T--TC-AGCTAAAAACTCGA-A--GT-GTACAGGATTTT-GTG---A-C-CAT-TTGAAAAAAGT
** * * * *** * **
10717 GTAATGCCATTTTATG--GCTTGTAAAT-TCATACAGTGGTCCCTTAAGCCTTCCATTTGAAGTT
556 GT--CCCCATTTCA-GACACTT-T-AATGGC-TAC--TGG---C---AGCAAACC-TGT-AAAAT
* * **** * * * ** * * * * *
10779 CATGGCAAGACGACTCGTTTTCTA-TTTTTCATGA-TTTTTGAAAACTTT--TTACGGTTCGAGA
605 C-T--CAA-ATG-CTC--TTT-AAGGGGGT-GTGAGTTCTCG--AGGTTTGATGAGGGATAG-GG
****** * *** * * **** * * * * *****
10840 TTTTTTTAAAATTTCCTCAG-A--AGGAGTTTTCGCCCCAACAAT-TGAG-ATACGATGTGGATC
658 GGCCAATATAAGGGCC-AAGTACCAGCACCCATCG-CACATC-ATGTGCGCACAC-CCCCCG--C
**** * * * ** * ** ** * **** * * *
10900 CTTGTATTTTTGTTGGCATGCACAAAACAAATTCAG-CTAAAAACT-C-AAG-TG-TACAG-GAT
717 CCCCCA--ATCGTCGG-AACCCCAATGC--CGTCGGTC-AGGTTCTCCGACGATGCTCCGGCGA-
* ** * ** * * **** *
10959 TTTGTGACCAT-TTG---AAAAAAGTGTCCCCATTTCAGACACTTTAATG-G-CTA-C-TG-GCA
775 -TGGTG-CC-TCGGGCAAAAAAAAATG-CGGCA--CCAG-CACATGCCCGAGCCCAGCATGTGCA
* **** * ** ** * * * * *
11015 ---GCAAACCT--GTAAAATCTCAATGCTCTTTA-AGGGGGTGTG-AGTTCTTGA-GGTTTGA-T
833 CCCGCAACCCTCGGTCCGGTC-C---GATC-TTACACTGGGAATGAACTCCGT-ATGCTTAGACT
11071 GAG
892 G-G
* ** * * * ** ***
11074 GGAT-AAGGGGCCAATGTAAGGGCC-AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
1 GAATGAA--CTCC---GT-A-TGCCTAAGT--CA--ACCCA-CG-A-A--ACGAGCG--TGCGGG
* ** * * * ** *
11137 CGCTCCCCAATGCCG-CCGGTCAGGTTCTCCGACGATGCTCCAG-CGATGGTGCCCCGGGCAAAA
48 CGCT---C-A-GCCGACCAG--AGG---GGC-AGGATGCACAAGCCG--GG-G-ATCGGTC----
** ** * * * * * *
11200 AAAAAATGTGGCACCAGC--ACATGTCCGAGCACAGCATGTGCACCCTCAACCCTCGGTCCAGTC
94 -----GGGTCCCCCCTGCGTGC-TG-CTGATC-CTGC-TGT-CA----C-A-CC-C--T-C-G--
* *
11263 TGATCTTACACTTGGAATGAACTCCGTATGCTTAAACTGGGAATGAACTCCGTATGCCTAAGTCA
136 -G----T---C-TGG--T---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
11328 ACCCATGAAATGAGCGTGCGGGC--GCTC-A-ACCGACCAGA-AGG-GCAGGATGCGCAAGTCAG
183 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCG-A-GATGCGCAAG-CCG
* * ** ** * * * *
11387 -GGATCGGTCGGGACCCTTCTACGTGCTGCCAACCCTACTA-CCACAACCCTTGATTCAGTTCAA
245 TGGATCGATAGGG----TGGTA-G-G-TG-----GGT-TTAGGCAC-A-TCTTCA-T-A-TT---
* * * ** * * * *** * * *
11450 TCTTAGAC-TAG-GAATG-AACTTCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGGG
289 TC-T-GCCAT-GCCAATGCCA-TTTTTATGGCT-TG-TAA-ATTC-ATAC-AATGGTC---C---
* * * * * * **** * * **
11512 CACTACGTCTGC-TAGAGAGGCGGGATGCGCAAGCCGTGGA-TCGATAGGGTGGTATGTGGGTTT
339 C-TTAAGCCTTCAT-GTGAAGTTTCATG-GCAAGAC---GACTCG-T---TTTCTAT-T---TTT
* * * * * ** * * * ** *
11575 AGGCAC-A-TCTTCATA-TTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA-A
390 ---CACGATTTTTGAAACTTTTTACGGT-TC-A-G-GA-TTTT-T---TT-AAAATTTTTTCAGA
* ** * * * * **
11636 TGG-TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG-TTCTT-TATTTTTCATGA
442 AGGAT---TTTGGCC-CCA----AA----CTTGG-TAGACG--T-GATCCTTGTATTTTTGTTG-
*** * *** *** * * ****** *
11698 TTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAAATTTTTTCAG-A-AGGAGTTTTG-GCCCC
490 -GCATG-CAC--AAAAAAATTCA-G-----CTAAAAACTCGAAGTGTACAGGA-TTTTGTG-ACC
* ** *** ** ** ** **** * * *
11760 AAACTTGGTAGGCGTGATCCTTGTATTTTTTTTGACA-TGCACA-AAAAAAT-TCAGCTAAAAAC
543 --ATTTGAAAAAAGTG-TCC--CCA---TTTCAGACACTTTA-ATGGCTACTGGCAGC--AAACC
* * * **** * ** *
11822 TCG--AAGTGTACAGGATTTTG-TGACCATTTGAAAAAAGTGTCCCCA-TT-TCAGACACTTTAA
597 T-GTAAAATCT-CA--A--ATGCT---C-TTT-AAGGGGGTGT---GAGTTCTC-GA-GGTTTGA
** ** * * *** * * ****** * ** * * *
11882 TG-GCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
646 TGAGGGA-TAGGGGGCCAA--TATAAGGGC-CAAGTAC-C----AGCACCCAT-CGCACATCATG
** * ****** *** * ** * * * *
11945 TTTG-ATGAGGGATAAG-GGGCCAAT-GTAAGGGCCAAGTACCAGCA-CCCATCGCCATCATGTT
701 TGCGCA-CA-CCCCCCGCCCCCCAATCGT--CGG--AA-CCCCA--ATGCCGTCG--GTCAGGTT
* **** ** * ** * ****** ** * * **
12006 GCGCAC-ACCCCACTCCCCCCCATGCAGCCGGGTCAGGTTCTCGACGATGC-TCTCCAGCGATTG
755 -CTC-CGACGATGCT-CCGGCGATGGTGCC---TCGGGCAAAAAAAAATGCGGCACCAGC-A-CA
* ** **
12069 TGCCCCGGGCAAAAAAATGTGGGGCACCAGCACATGTCCGAGCGCAGCAGTGCCACCTCAACCCT
812 TG-CCCGAGC-CCAGCA--T---G----------TG--C-A-C-C--C---G------CAACCCT
* * * * *
12134 CAGTGCGGTCTGATCTTACACTTGGGAATGAACACCGTAAAGCTTAGACT-G
844 CGGTCCGGTCCGATCTTACAC-TGGGAATGAACTCCGT-ATGCTTAGACTGG
* * * *
12185 GAATG-ACTCTGTATGCCTTAAGGTCAACCCATGAAAGCGAGCGTGCGGGCACTCAAACCGGACC
1 GAATGAACTCCGTATGCC-TAA-GTCAACCCACGAAA-CGAGCGTGCGGGCGCTC-AGCC-GACC
* ** * * * ** * * * *
12249 AGAAGGGCAGGATGTGCATAGTCGGGGATTGGTCGGGACAACCCTACGT-CTGC-AACCCTACTA
61 AGAGGGGCAGGATGCACA-AGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCT-
** * * * *
12312 CCCATACCCTCGGTTCAGTTC-AATCTTTAGAACTGGGAATGAA-T-CGTATGCCTAAG-CAACC
124 GTCACACCCTCGG-TCTGGTCTGATC-TTAG-ACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * * *
12373 GATGAAACGAACAGGGCAGGCGGGCAATCGTACGTCTGCCAGAGAGGCGGGATGCGCCGCAATCC
186 GACGAAACGAGC-GGGCGGGCGGGC-A-C-TACGCCGGCCAGAGAGGCGAGAT--G-CGCAAGCC
*
12438 GTGGATCGAATAGGGTGGTATGTGGGTTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
244 GTGGATCG-ATAGGGTGGTAGGTGGG-TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
12503 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
307 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* *
12568 GACTCGTTCTT-TATTTTTCACGATTTTTGAAACTTTTTACTGTTCAGGATTTTTTAAAAATTTT
372 GACTCGTT-TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTT
* *
12632 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGGCGCGATCCTTGTATTTTTGTTGGCATGCACAA
436 TTCAGAAGGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
12697 AAAAATTCAGCTAAAAACTTGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
500 AAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
12762 CCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
565 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* ** *
12827 AGTTCTTGAGGTTTGATGAGGGATAAAGGGCCAATGTAAGGGCCAAGTACCAGCACCCATCGCAC
630 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
*
12892 ATCATGTGCGCACA-CCCCCG-----C--T--T------CCCAATGCCGCCGGTCAGGTTCTCCG
695 ATCATGTGCGCACACCCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * *
12941 ATGATGCTCCGGCGATGGTGCCCCGGGCAAAAAAAAATGTGGCACCAGCACATGTCCGAGCACAG
760 ACGATGCTCCGGCGATGGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * *
13006 CATGTGCA-CCGTCAACCTTCGGTCCGGTCTGATCTTACACTTGGAATGAACTCCGTATGCTTAA
825 CATGTGCACCCG-CAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAG
13070 ACTGG
889 ACTGG
* * * *
13075 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGCTCAACCGACCAGAAG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * * ** * * **
13140 GGCCGGATGCGCAAGTCGGGGATCGGTCGGGACCCCTCTACGTGCTGCCAACCCTACTACCACAA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTCAC-A
* * * * * *
13205 CCCTCGATTCAGTTC-GATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCAATGAAAC
130 CCCTCG-GTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * * *
13269 GAACGGGCGGGCGGGCACTACGTCTGCCAGAGAAGCGGGATGCGCAAGCCATGGATCGATAGGGT
194 GAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGT
* *
13334 GGTATGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGGAAA
259 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAA
13399 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTCTT-TATTT
324 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT-TTCTATTT
* *
13463 TTCATGATTTTTGAAACTTTTTACGGTTCAGGA-TTTTTAAAAATTTTTTCAGAAGGAGTTTTGG
388 TTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGG
* *
13527 CCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAAAATTCAGCTAAAAA
452 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
13592 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
517 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
13657 TACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGAT
582 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
13722 GAGGGATAAGGGGCCAATGTAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA---
647 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
*
13784 -----CCCCC-A-C-T-----CCCCAATGCCG-CTGGTCAGGTTCTCCGACGATGCTCCGGTGAT
712 CCCGCCCCCCAATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATGCTCCGGCGAT
* * * ** * * *
13835 TGTGCCCCGGGCAAAAAAAAATGTGGCACCAGCACATGTTCAAGCACAGCATGTGCACCCTCAAC
776 GGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAAC
* * * *
13900 CCTCAGTCCAGTCTGATCTTACACTTGGAATGAACTCCGTATGCTTAGACTGG
841 CCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
13953 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAACCGACCAGAAG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
** * * * ** * * ** *
14018 GGCAGGATGTGCAAGTCGGGGATCGGTCGGGACCCCCCTACGTGCTGCCAACCCTACTACCATAC
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTCACAC
* * * *
14083 CCTCGGTTCAGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACG
131 CCTCGG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* ** * * * * *
14147 AACGGGTAGGCAGGCACTACGTCTGCCAGAGAGGCGGGATGCGCAAACCGTGGATCGATAGGGTG
195 AGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTG
*
14212 GTATGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAAT
260 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAAT
14277 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
325 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* *
14342 CACAATTTTTGAAACTTTTTATGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCC
390 CACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGGCC
* *
14407 CCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACT
454 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
*
14472 CGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTCTCCCCATTTCAGACACTTTAATGGCTA
519 CGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
14537 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
584 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
*
14602 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGCACATCATGTGCGCACACCCCC
649 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * * ** * *
14667 GGCCCCCCAATCGCCGAAACCCCAATGCCGTCAGTCAGGTTCTCCGGGGATGATCCGACGATGGT
714 CGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGT
* * *
14732 -CACT-GGGCGAAAAAAAATGCGGGACCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCC
779 GC-CTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAACCC
* ** ** *
14795 TTGGTCCTATCCGATCTTACACTGGGAATGAACTTTGTATGTTTAGACTGG
843 TCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * ** * * **
14846 GAATGAACTCTGTATGCCTAAGTTAATACACGAAACGAGCGTACGGGTGCTCAG-TTAGCCAGAG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGA-CCAGAG
* ** * ** *
14910 GGGCAGGATGCGCAAGTTGGGGATCGG-CTGCGTCCCCCCTATGTGCTG-TCGATCCTACTACCG
65 GGGCAGGATGCACAAGCCGGGGATCGGTC-GGGTCCCCCCTGCGTGCTGCT-GATCCTGCT---G
* * * * * *
14973 T-A-ACCCTCGATCTGCTTTGATCTTAGACTAGGAATGAACTTCGTATACCTAAGCCAACCGACG
125 TCACACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
** * * * * * * *
15036 AAACGAGTAGACGGGCGGGCACTACGTCGGCTAGAGTGGCGGGATGCGTAAGTCGTGGATCGATA
190 AAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATA
* *
15101 GGGTGGTATGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTATGGCTTG
255 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTG
15166 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
320 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * * * * *
15231 TTTTTAATGATTTTTGAAA-TTTTTATGGTTTAAGACTTTTTAAAAATTTTTTCACATGAAGG--
385 TTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTT--CA-GAAGGAT
*
15293 TTTGGCCCCACACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
447 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
15358 AAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTCTCCCCATTTCAGACACTTTA
512 AAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
15423 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
577 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* *
15488 TTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCACG
642 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG--CG
* * * * *
15553 CAAGCCCCCTCCCGCCCCCCCAATCGTCGGAACCCCAATGCTGCCAGTCAGGTTGTCCGACGATG
705 C-A-CACCC-CCCG-CCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATG
* * * * *
15618 CTCCGGTGATGGTGCCTCAGGCAAAAAAAAAATACGGTACCAGCACATGCCCGAGCCAAGCATGT
766 CTCCGGCGATGGTGCCTCGGGC-AAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * *
15683 GCAACCGCAACCCTCTGTCCGGTCCGAACTTACATTGGGAATGAACTCCGTATGCTTAGACTAG
830 GCACCCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
15747 GAATGAAC-CTCGTATGCCTAAGTCAACCCACGGAACGAGCGTGTGGGCGCTCAGCC-AGCTAGA
1 GAATGAACTC-CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGA-CCAGA
* * * * ** *
15810 GGGGCAGAATGCGCAAGCCGAGGATCGGTCGGGTCCCCCCTGCATGCTGCCAATCCTACTG-CTA
64 GGGGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTC-A
* * * * * *
15874 CAACCCTCCGTCTGGTCCGATCTTAGACTGGGAATGATCCCCGTAAGCCTAAGCCAACCTACGAA
128 C-ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * *
15939 ACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGACATGTGCAAGCCGTGGATCGATAGG
192 ACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGG
* * * *
16004 GTGGTAGGTGGGTTTAGTCACATCTTCATATTTCTACCCTGCCAATGCCATTTTTATGGCTTGTT
257 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTA
* *
16069 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGGCTCATTTTCTATT
322 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** * * *
16134 TTTCATGATTTTCAAAACCTTTTACGATTC-GAGATTTTTTTTAAATTTTTTCAGAAGGAGTTTT
387 TTTCACGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTTAAAATTTTTTCAGAAGGA-TTTT
* * *
16198 GGTCCCACACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAATTTTC-GCTAA
450 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-ATTCAGCTAA
* * * *
16261 AGACTCGAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAAT
514 AAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
16326 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
579 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
*
16391 GATGAGGGATAGTGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
644 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
** ** *
16456 CCCCCCGCCCCCCCAATGCCATCGTCAAAACCCCAATGCCACCGGTCAAGTTCTCCGACGATGCT
709 CCCCCCG-CCCCCC-A----ATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCT
* * * * *
16521 CCGACGATGGTGCACT-GGGCGAAAAAAAATGTGGGACCAGCACATGCCCAAGCCCAGCATGTGC
768 CCGGCGATGGTGC-CTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * * * * *
16585 ACCCGTAACCCTCGGTCTGATCTGATCTGAGACTAGGAATGAACTCCATATGCTTAGACTGG
832 ACCCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
16647 GAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAACCAACCATAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* ** * * ** *
16712 GGCAGGATGCACAAGCCGGGAATAAG-CTGGGTCCCTCCCTGTGTGCTG-TCGATCCTACTACCG
66 GGCAGGATGCACAAGCCGGGGATCGGTC-GGGTCCC-CCCTGCGTGCTGCT-GATCCTGCTGTCA
* ** * * * * *
16775 CAACCCTCGATCTACTCT-AGTTTTAGACTAGGAATGAACTTCGTATACCTAAGCCAATCGACGA
128 C-ACCCTCGGTCTGGTCTGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* ** *
16839 AACGAGCGGACGGGCAAGCACTACGTCGGCCAGAGAGGC-AGGATGCGCAAGCCGTGGATCGATA
191 AACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGA-GATGCGCAAGCCGTGGATCGATA
*
16903 GGGTGGTATGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTG
255 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTG
16968 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTCTT-T
320 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT-TTCT
*
17032 ATTTTTCACGATTTTTGAAACTTTATACGGTTCAGGATTTTTTTTAAAATTTTTTCAGAAGGAGT
384 ATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGA-TTTTTTTAAAATTTTTTCAGAAGGA-T
* * * *
17097 TTTGGCCACAAGCTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAATAATTCAGCT
447 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
17162 AAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
512 AAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
17227 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
577 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * *
17292 TTGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTCCCAGCACCCATCGCATATCATGTGCGCA
642 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * *
17357 CACCCCCCGCCCCCCCAATCATCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGATGATGCTCCG
707 CACCCCCCG-CCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCG
* * * * *
17422 GCGATGGTGCC-CTGGGC-AAAAAAAATGCAGCGCCAACACATGACCGCA-CCCAACATGTGCAC
771 GCGATGGTGCCTC-GGGCAAAAAAAAATGCGGCACCAGCACATGCCCG-AGCCCAGCATGTGCAC
*** * * * * ** *
17484 CCATGACCCTCGGTCCAGTTCAATCTTACATTGGGAGCG-ACTTCTGTATGCTTAGACTGG
834 CCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAAC-TCCGTATGCTTAGACTGG
* * * *
17544 GAATTAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCG-GCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * * * * **
17608 GGTAGGATGCACAAGCCGAGGATCTGTC-AGTCCCACCTGTGTGCTGCTGAACCTACTGTCGTAG
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTCACA-
* * * * * * *
17672 CCCTTGGTCCGGTCTAACCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCAATGAAACG
130 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * * * * * *
17737 AGCGGGCGGGCAGGCACTACGTCGGCCAGAGAGTCGGGATACACGAGCCGTGGATCGATATGGTG
195 AGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTG
* *
17802 GTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCACGCCAATGCCATTTTTATGGCTTGTAAAT
260 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
17867 TCAGACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
325 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * ** *
17932 CATGATTTTT-ACAACTTTTTACGGTTCGGGATTTTTTTTTAATTTTTTTAGAAGGATTTTTGGC
390 CACGATTTTTGA-AACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGGC
* * *
17996 CCCAAAATTGGTAGACATGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
453 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
*
18061 TCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCT
518 TCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * * * *
18126 ATTGGCAGCAAACTTATAAAATCTCAAATGCTCGTTAAGGGGGTGTGAGTTCTTGAGGTTTGATG
583 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * *
18191 AGGGATAAGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGCGCACCCC
648 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * ** * ** **
18256 CCGCCCCCCCAATCG-CTGAACCCCAATGCCGTTGGTCAATTTCTCTGGTGATGCTCCGATGATG
713 CCG-CCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATG
* * *
18320 GTGCCTCGGGCAAAAAACAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCACCTGCAACC
777 GTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAACC
* *
18385 CTCGGTCTGGTTCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
842 CTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
18437 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC-GG-GCTCAGCAGGCCAGAGA
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * ** * * *
18500 GGCAGGATGCGCAAACCAGGGATCGACCGGGTCCCCCCTACGTGCTGCTGATCCTACTG-CAATA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTC-A-C
* *** *
18564 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCGATTAACAAAAC
129 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* ** * *
18629 GAGCGGG-GGGTGGGCACTATACCGACC-GAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
194 GAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGT
** *
18692 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGATG-CAATGCCATTTTTGTGGCTTGTAAA
259 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAA
*
18756 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTT
324 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * *
18821 TCATGATTTTT-AAATCTTTTTACGGTTCGGGATTTTTTTTAAATTTTTTCAGAAGGAGTTTTGG
389 TCACGATTTTTGAAA-CTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGG
*
18885 CCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
452 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * * * **
18950 CTCAAAATGTATAGTATTTTGTGACTGTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
517 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
19015 TACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGAT
582 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * ** ** *
19080 GAGGGAT-GGGGGCCAATATAAGGGCCAAGCACCAGCACTCATCTTACATCACATGCGCGCACCC
647 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * * * * * *
19144 CCCGCCCCTCAATTGTTGGAACCCTAATGCCGCCGGTTAGGTTCTCCGGCGATGCTCCGACGATG
712 CCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATG
* ** * * *
19209 GTGCCCCATGCGAAAAAAAAA-GTGGCACCAACACATGCCCGAGCCCAGCATGTGCACCCGTAAC
777 GTGCCTCGGGC-AAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAAC
* * * *
19273 CCTCGGTCCGGTCTGATCTTACATTGGAAATGAACTCCATATGCTTAGACTGG
841 CCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
19326 GAATGAGCTCCGTATGCCTAAGTCAACCCATGAAACGAACGTGCTGGCGCTCAACCGGCCAAAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * * * *
19391 GCCAGGATGCACAAGCTGGGGGTTGG-CAGGGTCCCCCCTACATGCTACCGATCCTATTGCTG-C
66 GGCAGGATGCACAAGCCGGGGATCGGTC-GGGTCCCCCCTGCGTGCTGCTGATCC---TGCTGTC
** * *
19454 A-ACCCTCGGTCTGGTCCAATCTTAGAC-GAGGAATGAACTCCGTATACCTAAGCCAACCAACGA
127 ACACCCTCGGTCTGGTCTGATCTTAGACTG-GGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * *
19517 AACGAGCGGGCAGGCGGGCACTACGCCGGCTAGAGAGGCGGGATGTGCAAGCCGCGGATCAATAG
191 AACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAG
19582 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGT
256 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGT
19647 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
321 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
19712 TTTTCACGATTTTTCAAACTTTTTATGGTTCGGGA-TTTTTTAAAA-TTTTTCAGAAGGAGTTTT
386 TTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTT
* *
19775 GGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT-AA
450 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
19839 AACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
515 AACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
19904 GCTACT-GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
580 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
19968 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG-GCACAC
645 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
* *
20032 CCCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCG
709 CCCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCG
* ** ** * *
20097 ATGGTGCCTCGGGCGAAAAAAAATATGGCACCAGCACATGCCTAAGCCCAGCATGTGCACTCACA
774 ATGGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCA
* * * * ** * *
20162 ACTCTGGGTTCAGTTTGATCTTACACTGGGAATGAAGTTCGTATGCTTAGACTGG
839 ACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * ** *
20217 GAATGAACTCCGTATGCCTAAG-CAACCCATGAAACGAGTGAGCAGGCGCTCAATCGGCCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * *
20281 GGCAGGATGCACAAGCCGGGGATCGGTTGGGTGCCCCCCTGCGTGCTG-TCGATCATGCTGCCAT
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGT-CCCCCCTGCGTGCTGCT-GATCCTGCTGTCA-
* * * * *
20345 AACCCTCAGTCTAGT-TCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAATCGACGAA
128 CACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * *
20409 ACGAGCTGGCGGGCGGGCACTACGTCGACCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGG
192 ACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGG
* * * ** * *
20474 GTGGTAGGTGGGTTTAGGAACTTCTTCATCTTTCTGCTGTGCCAATACCATTTTCATGGCTTGTA
257 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTA
* * *
20539 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGTCGGCTCGTTTTTTATT
322 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * *
20604 TTTCATGATTTTTAAAACTTTTTACAGTTCAGGATTTTTTTAAAATCTTTTT-AGAAGGCGTTTT
387 TTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAAT-TTTTTCAGAAGG-ATTTT
*
20668 GGCTCCAAAC-TGGTA-A-GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
450 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* **
20730 AACTAGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
515 AACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
20795 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
580 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * * *
20860 ATGACGGATA-GGGGCCAATATAAGAGCAAAGTACCAGCACCCATCGCACATCATGTGTGCACAC
645 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
* * * *
20924 ACCCACCGCCCCCCAATCGCCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCTGGC
710 -CCC-CCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGC
* * * * *
20989 GATGGTGCCCCGGGC-GAAAAAAA-GTGGCACCAGCACATGCCCTAGCCCAGCATGTGCACCCGT
773 GATGGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGC
* * * * * *
21052 AACCCTCAGTCTGATCTGATCTTACACTGGGAATGAACTTCGTATGGTTAGACTGG
838 AACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * ** *
21108 CAATGAACTCCGTAAGCCTAAGTCAACCCACGAAATGAGCGCGTAGGCGCTCAGCTGACCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * ** *
21173 GGCAGGATGCGCAAGCCGGGGATCAG-CTGGGTCCCCTCTTGCGTGCTACCGATCCTGCTACCGC
66 GGCAGGATGCACAAGCCGGGGATCGGTC-GGGTCCCC-CCTGCGTGCTGCTGATCCTGCTGTCAC
* *
21237 AACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAA
129 -ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
21302 CGAGCGGGTGGGTGGGCACTACGCCGGCCAGAGAGGC-AGGATGCACAAGCCGT-GATTCGATAG
193 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGA-GATGCGCAAGCCGTGGA-TCGATAG
21365 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGT
256 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGT
*
21430 AAATTCAAACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
321 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
21495 TTTTCAC-ATCTTTTGAAACTTTTTACGGGTC-GAGATTTTTTTAAAATTTTTTTAGAAGGCGTT
386 TTTTCACGAT-TTTTGAAACTTTTTACGGTTCAG-GATTTTTTTAAAATTTTTTCAGAAGG-ATT
* * * * * * * *
21558 TTGGCGCTAAATTTGGTAGATGTGATCCTTTTATTTTTTTTTGGCATGCCCAAAAAAATTTAGCT
448 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCT
** *
21623 AAAAACTCGAAGTGTACAGGATTTTGTGACCATTCAAAAAAAGTGTCCCCATTTTAGACACTTTA
512 AAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * * *
21688 ATGGCTATTGGCAGTAAACCTGTCAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTAC-A-
577 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-T-CGAG
*
21751 GTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA--TGCG
640 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * ** * * * * * ** *
21814 CATACACCCTCTACCCCCAATCGCCGGAATCCTAATGCCGTTGGTCAGTTTCTTAGGCGATGCTC
705 CACAC-CCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTC
* * * * * *
21879 TGACGATGGTGCCTCGGGCGAAAAAATAATGCGGCACTAGCACATGCCCGAGCCTAGCACGTGCA
769 CGGCGATGGTGCCTCGGGC-AAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCA
*** * * * * *
21944 CCTATAACCTTCGATCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGATTGA
833 CCCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
** * * * * * ** *
22005 GAATGAACTCTATATGCCTAAGTCAACCCATGAAACAAGCGTACGGGTGCTGAATCGGCCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * * * **
22070 AGCAAGATGCACTAGCTGGGGATCGGTCGGGTCCGCCCTTGCGTGCT-ATCGATCTTGCTACCAC
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCC-CCCCTGCGTGCTGCT-GATCCTGCTGTCAC
* * * * * *
22134 AACCCTCGATCTGATCTGATCTTAGATTGGGAAAGAACTCCGTATGCCTAAGGCAACCGATGAAA
129 -ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
22199 CGAGCGAGCGGGCGGCCACCT-CGTCGGCCAGAGAGGCGAGATGTGCAAGCCGTGGATCGATAGG
193 CGAGCGGGCGGGCGGGCA-CTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGG
22263 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTA
257 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTA
* * *
22328 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCGTGGCAAGACGGCTCGTTCTCTATT
322 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * *
22393 TTTCACGATTTTTGAAACTTTTTACGATTCGGGATTTTTTTTAAATTTTTTCAGAAGAATTTTTG
387 TTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTG
* * * *
22458 G-CCCTAACTTTGTAGATGTGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAATTCAGCTAAAA
451 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
** * *
22522 ACTATAAGTGTACAGGATTTTGTGACCATTTGACAAAAA-TGTCCCCATTTTAGATACTTTAATG
516 ACTCGAAGTGTACAGGATTTTGTGACCATTTGA-AAAAAGTGTCCCCATTTCAGACACTTTAATG
* * *
22586 GCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCTAGGTTTG
580 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* *
22651 ATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA-
645 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
* * * * * * * *
22715 ------CCTCCCAATCGTCAGAACCCCAAAGTCGCCGGTCAGGTTCTTCGACGATGCTCTGGTGA
710 CCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGA
* * * *
22774 TGGTGCCCCTGACGAAAAAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCACCCGCA
775 TGGTGCCTCGGGC-AAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCA
* * * *
22839 ACCCTTGGTCCAGTCTGATCTTACACTGGGAATGAACTCCATATGCTTAGACTGG
839 ACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
22894 GAATAAACTTCGTATGCCTAACTCAACCCACGAAATGAGCATGCGGGCGCTCAGCCGGCTAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
** * * * *
22959 GGCAGGATGTGCAAGCCGAGGATCGGTCGGGTCCCCCCCTGCGTGCTGCCGATCTTGCT-ACTAC
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGT-CCCCCCTGCGTGCTGCTGATCCTGCTGTC-AC
* *** * * *
23023 AACCCTTGGTCCAATC-CAGTCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAA
129 -ACCCTCGGTCTGGTCTGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* **** * * * ** *
23087 ACGAGCGGGCGGACAAAAACTACGCCGGCCAGAGAGGCGGGATACGGAAGCTATAGATCGATAGG
192 ACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGG
** *
23152 GTGGTAGGTGGGTTTAGGCACATAATCATATTTCTGCCATGCCAATGCCAATTTTATGGCTTGTA
257 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTA
23217 AATTCATACAAT-GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
322 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
**
23281 TTTCACGATTTTCAAAACTTTTTACGGTTC-GAGATTTTTTTAAAATTTTTTCAGAAGGAGTTTT
387 TTTCACGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTTAAAATTTTTTCAGAAGGA-TTTT
* * * * * * *
23345 GGCCCAAAACTTGGTAAATGGGATCCTTCTATTTTTTTTGGCATGCACAAAAAAATTCAGCTCAA
450 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
23410 ACCTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATG
515 AACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * *
23475 GCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTTGAGGTTTG
580 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * *
23540 ATGAGGGATAGGGGGCCAATGTAAGGGCCAAGTACCAGCACCTATCGCATATCATGTGCGCACAC
645 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
** *
23605 CCCCCGCCCCCCCAATCGTCGGAACCGTAATGTCGTCGGTCAGGTTCTCCGACGA---T---G-G
710 CCCCCG-CCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCG
* * * ** * **
23663 -T-G-G-CACGAGCGAAAAAAAGGGTGGCA-CAGCACATGCCCGAGATCAGCATGTGCACCCGCA
774 ATGGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCA
** ** *
23723 ACCCAGGGTCCGGTCTAATCTTACACTGGGAATGAACTCCGTACGCTTAGACTGG
839 ACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
23778 GAATGAACTCCGTATGCCTAAATCAGCCCACGGAACAAGCGTGCGAGCGCTAAGTCGACCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * ** ** * *
23843 GCCAGGATGCACAAGCTGGGGATCGGTCGGGTGCCCCCCTATGTGCTGCCAATCCTACAGTCGTA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGT-CCCCCCTGCGTGCTGCTGATCCTGCTGTC--A
* * * *
23908 -ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACTGACAAAA
128 CACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
23972 CGATCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGTAAGCCGTGGATTGATATGG
193 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGG
* *
24037 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCATTGCCATTTTTACGGCTTGTAA
258 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAA
**
24102 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTGTGGCAAGACGACTCGTTTTCTATTT
323 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * ** * *
24167 TTCACGATTTTTAAAACTTTTTTCGGTTTGGGA-TTTTTAAAAATTTTTT-AGATGGAGTTTTGG
388 TTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGG
* *
24230 CCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGCTAAAAA
452 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
24295 CTCGAAGTGTACAGGATTTTGTGACCATTTGAATAAAGTGTCCCCATTTCAGACACTTTGATGGC
517 CTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
24360 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
582 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * * * *
24425 AAGGGATAAGGGGCCAATATAAGGTCCAAATACCAGCACCCATCACACATCATGTGCGCACACCC
647 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * * ** **
24490 CCCGGCCCCCCAATCGTCGGAACCCCAATTCCGTCGCTCTGGTTCTCCGACAATGCTCTAGCGGC
712 CCC-GCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGAT
* * * * *
24555 GCTGCCTCCGGC-GAAAAAAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCACCCGCAAC
776 GGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAAC
* * * * * *
24619 CCTCGGTCTGGTCCAACCTTACACTGGGAATAAACTCTGTATACTTAGACTGG
841 CCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * ** *
24672 GAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAATCGGCCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
** * * *
24737 GGCAGGATGCGTAAGCCGGGGATCGGTCGGGTCCCTCCTGCGTGCTACTGATCTTGCTG-CTACA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTC-AC-
* ** * * * * * *
24801 ACCCTTGGTCTATTCTGATCTTAGACTAGGAATAAACTCCGTATGCCTAAGGCAGCCAACGAAAT
129 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * *
24866 GAGCGGGTGGGCGGGCACTACACCGGCCAGAGAGGCGGGACGCGCAAGCCGTGGATCGATAGCGT
194 GAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGT
* *
24931 GGTAGGTGGGTTTAGGCACATCTTCATATCTCTGCCAAGCCAATGCCATTTTTATGGCTTGTAAA
259 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAA
* ** * *
24996 TTCATACAATGGTCCTTTAAGCCTTTGTGTGAAGTTTCATGGCAAGACAACTCGTTTTCTGTTTT
324 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* *
25061 TCACGATTTTTGAAACTTTTTACGGTT-TGGTATTTTTTTAAAATATTTTCAGAAGGACTTTTGG
389 TCACGATTTTTGAAACTTTTTACGGTTCAGG-ATTTTTTTAAAATTTTTTCAGAAGGA-TTTTGG
* *
25125 CCCCAAACTGGGTAGACGTGATCCTTGTATTTTTTGTTGGCATGCACAAAACAATTCAGCTAAAA
452 CCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
*
25190 ACTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
516 ACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * *
25255 CTATTGGCAGCAAACTTGTAAAATCTCAAATGCTTTTTAAAGGGGTGTGAGTTCTCGAGGTTTGA
581 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * *
25320 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATTGCACATCATGTGCGGACA-C
646 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
** * * * * * * *
25384 CCCCTACCCCCAATTGTCAGAACCCCAATGCTGCCGATCAGGTTCTCCGGCGATGCTCCGACGAT
711 CCCCGCCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGAT
* * *
25449 GGTGCCCCGGGCAAAAAAAAATGTGGTACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAAC
776 GGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAAC
* * * * *
25514 CCTCTGTCTGGTCCGATCTTACACTGGAAATGAACTCCGTATGCTTACACTAG
841 CCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
25567 GAATGAACTCCGTATGCCTATGTC-A--CACGAAATGAGCGTGCGGGCGCTCAGCCGACCAGAGG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* ** ** * * * * * * * ** *
25629 GGTAACATGC-CAAATCAGGGATCGATCGGGTCCCTCTTGCGTGCT-ATCGATCTTACTACCGCA
66 GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCT-GATCCTGCTGTCAC-
* * ** *
25692 AACCTCAGT-TCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCCAACCGACGAAA
129 ACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
25756 CGAGCGGGCAGGCGAGCACTACGTCGGCCAGAGAGG-TAGGATGCGCAAGCCGTGGATTGATAGG
193 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGA-GATGCGCAAGCCGTGGATCGATAGG
** *
25820 GTGACAGGTGGGTTTAGGCACATCTTCATATTTCTGACATGCCAATGCCATTTTTATGGCTTGTA
257 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTA
* *
25885 AATTCATACAATCGTCCCTTAAGCCTTCATGTGAAGTTTTATGGCAAGACGACTCGTTTTCTATT
322 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * *
25950 TTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAAAATTTTTT-AGATGGAGTTTT
387 TTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTT-TAAAATTTTTTCAGAAGGA-TTTT
*
26014 GGCGCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
450 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
26079 AACTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
515 AACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * *
26144 GCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCAAGGTTTG
580 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
*
26209 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACAC
645 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA--TGTGCGCA-
* * * * * * *
26274 CACCCCCCCACCCCTCCAATC-TCCGAAACCCCAATGCCGCCAGTCAGGTTCTCTGGCGATGCTT
707 CA-CCCCCCGCCCC-CCAATCGT-CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTC
* * * * * * * * *
26338 CGGCGATGGTGCCCCGAGCGAAAAAAAATGCAGTACCAGCACATGCCCAAACCTATCATGTGCAC
769 CGGCGATGGTGCCTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCAC
* * * * ** *
26403 CCGCAACTCTCAGTCTGATATGATCTTACACTGGGAATGAACTCCATATGCTTAGACTGG
834 CCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * *
26463 GAATGAACTCCGTGTGCCTAATTGAACCCACGAAACGATCGTGCGGGCGCTAAGCTGGA-CAGAG
1 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC-CGACCAGAG
26527 GGGCAGGATGCACAAGCCGGG
65 GGGCAGGATGCACAAGCCGGG
26548 TGTCACGGAC
Statistics
Matches: 18071, Mismatches: 2885, Indels: 1733
0.80 0.13 0.08
Matches are distributed among these distances:
876 3 0.00
877 276 0.02
878 824 0.05
879 151 0.01
880 17 0.00
881 32 0.00
882 209 0.01
883 303 0.02
884 403 0.02
885 139 0.01
886 45 0.00
887 57 0.00
888 164 0.01
889 900 0.05
890 770 0.04
891 1552 0.09
892 1099 0.06
893 2034 0.11
894 1217 0.07
895 714 0.04
896 1060 0.06
897 1072 0.06
898 334 0.02
899 649 0.04
900 248 0.01
901 1020 0.06
902 287 0.02
903 429 0.02
904 6 0.00
905 2 0.00
906 10 0.00
907 9 0.00
908 17 0.00
909 12 0.00
910 9 0.00
911 11 0.00
912 4 0.00
913 3 0.00
914 6 0.00
915 7 0.00
916 3 0.00
917 2 0.00
918 11 0.00
919 2 0.00
920 210 0.01
921 164 0.01
922 59 0.00
923 59 0.00
924 43 0.00
925 78 0.00
926 39 0.00
927 64 0.00
928 92 0.01
929 6 0.00
930 7 0.00
931 1 0.00
932 4 0.00
933 6 0.00
935 3 0.00
936 4 0.00
938 9 0.00
939 3 0.00
942 1 0.00
943 6 0.00
944 8 0.00
945 9 0.00
946 7 0.00
947 1 0.00
948 3 0.00
951 2 0.00
953 8 0.00
954 9 0.00
955 2 0.00
956 4 0.00
957 1 0.00
958 1 0.00
959 8 0.00
960 8 0.00
961 11 0.00
962 19 0.00
963 22 0.00
964 21 0.00
965 9 0.00
966 5 0.00
967 7 0.00
968 3 0.00
969 9 0.00
970 2 0.00
971 12 0.00
972 29 0.00
973 20 0.00
974 9 0.00
975 13 0.00
976 10 0.00
977 14 0.00
978 17 0.00
979 17 0.00
980 8 0.00
981 10 0.00
982 2 0.00
983 1 0.00
984 2 0.00
985 5 0.00
986 5 0.00
987 2 0.00
988 8 0.00
989 4 0.00
990 9 0.00
991 5 0.00
992 8 0.00
993 3 0.00
994 3 0.00
996 2 0.00
997 3 0.00
998 9 0.00
999 1 0.00
1000 3 0.00
1001 16 0.00
1002 4 0.00
1004 1 0.00
1005 1 0.00
1006 4 0.00
1007 2 0.00
1008 6 0.00
1009 9 0.00
1010 11 0.00
1011 12 0.00
1012 2 0.00
1014 1 0.00
1015 3 0.00
1016 2 0.00
1017 1 0.00
1018 4 0.00
1019 4 0.00
1021 8 0.00
1022 14 0.00
1023 2 0.00
1024 2 0.00
1025 3 0.00
1026 3 0.00
1027 1 0.00
1028 7 0.00
1029 14 0.00
1030 19 0.00
1031 5 0.00
1032 5 0.00
1033 9 0.00
1034 19 0.00
1035 4 0.00
1036 8 0.00
1037 1 0.00
1038 3 0.00
1039 10 0.00
1040 9 0.00
1041 10 0.00
1042 20 0.00
1043 24 0.00
1044 9 0.00
1045 14 0.00
1046 1 0.00
1047 3 0.00
1048 4 0.00
1049 9 0.00
1050 20 0.00
1051 20 0.00
1052 11 0.00
1053 24 0.00
1054 13 0.00
1055 15 0.00
1056 7 0.00
1057 9 0.00
1058 9 0.00
1059 7 0.00
1060 15 0.00
1061 16 0.00
1062 8 0.00
1063 13 0.00
1064 10 0.00
1065 3 0.00
1066 7 0.00
1067 4 0.00
1068 8 0.00
1069 7 0.00
1070 5 0.00
1071 2 0.00
1072 2 0.00
1073 3 0.00
1074 4 0.00
1075 2 0.00
1076 2 0.00
1077 1 0.00
1078 7 0.00
1079 1 0.00
1081 1 0.00
1087 3 0.00
1088 1 0.00
1089 8 0.00
1090 3 0.00
1091 2 0.00
1092 1 0.00
1093 4 0.00
1094 5 0.00
1095 4 0.00
1097 4 0.00
1098 1 0.00
1099 4 0.00
1100 1 0.00
1101 1 0.00
1102 1 0.00
1103 5 0.00
1104 3 0.00
1105 4 0.00
1106 4 0.00
1107 2 0.00
1108 3 0.00
1109 5 0.00
1110 5 0.00
1111 15 0.00
1112 5 0.00
1113 5 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (893 bp):
GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
GGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCTGCGTGCTGCTGATCCTGCTGTCACAC
CCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGG
TAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATT
CATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
ACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCAGAAGGATTTTGGCCCC
AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
AAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
CCCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGC
CTCGGGCAAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCG
GTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGG
Found at i:8317 original size:26 final size:26
Alignment explanation
Indices: 8288--8340 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
8278 CTGGTCCGAT
8288 CTTACACTAGGAATGAACTCCGTATG
1 CTTACACTAGGAATGAACTCCGTATG
* *
8314 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTAGGAATGAACTCCGTATG
8340 C
1 C
8341 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTACACTAGGAATGAACTCCGTATG
Found at i:11305 original size:26 final size:26
Alignment explanation
Indices: 11267--11319 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
11257 CCAGTCTGAT
* *
11267 CTTACACTTGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
11293 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
11319 C
1 C
11320 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:13068 original size:26 final size:26
Alignment explanation
Indices: 13039--13091 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13029 CCGGTCTGAT
* *
13039 CTTACACTTGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
13065 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
13091 C
1 C
13092 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:13955 original size:26 final size:26
Alignment explanation
Indices: 13917--13969 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13907 CCAGTCTGAT
*
13917 CTTACACTTGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
13943 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
13969 C
1 C
13970 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:15740 original size:26 final size:26
Alignment explanation
Indices: 15711--15763 Score: 63
Period size: 26 Copynumber: 2.0 Consensus size: 26
15701 CCGGTCCGAA
* *
15711 CTTACATTGGGAATGAA-CTCCGTATG
1 CTTACACTAGGAATGAACCT-CGTATG
*
15737 CTTAGACTAGGAATGAACCTCGTATG
1 CTTACACTAGGAATGAACCTCGTATG
15763 C
1 C
15764 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
26 21 0.91
27 2 0.09
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTACACTAGGAATGAACCTCGTATG
Found at i:16503 original size:21 final size:20
Alignment explanation
Indices: 16466--16504 Score: 60
Period size: 20 Copynumber: 1.9 Consensus size: 20
16456 CCCCCCGCCC
*
16466 CCCCAATGCCATCGTCAAAA
1 CCCCAATGCCACCGTCAAAA
16486 CCCCAATGCCACCGGTCAA
1 CCCCAATGCCACC-GTCAA
16505 GTTCTCCGAC
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
20 12 0.71
21 5 0.29
ACGTcount: A:0.31, C:0.44, G:0.13, T:0.13
Consensus pattern (20 bp):
CCCCAATGCCACCGTCAAAA
Found at i:18437 original size:26 final size:26
Alignment explanation
Indices: 18401--18453 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18391 CTGGTTCGAT
18401 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
18427 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
18453 C
1 C
18454 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:20210 original size:26 final size:26
Alignment explanation
Indices: 20181--20233 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
20171 TCAGTTTGAT
* *
20181 CTTACACTGGGAATGAAGTTCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
20207 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
20233 C
1 C
20234 CTAAGCAACC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:23771 original size:26 final size:26
Alignment explanation
Indices: 23742--23791 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
23732 CCGGTCTAAT
23742 CTTACACTGGGAATGAACTCCGTACG
1 CTTACACTGGGAATGAACTCCGTACG
*
23768 CTTAGACTGGGAATGAACTCCGTA
1 CTTACACTGGGAATGAACTCCGTA
23792 TGCCTAAATC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.24, G:0.24, T:0.24
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTACG
Found at i:25560 original size:26 final size:26
Alignment explanation
Indices: 25531--25583 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
25521 CTGGTCCGAT
25531 CTTACACT-GGAAATGAACTCCGTATG
1 CTTACACTAGG-AATGAACTCCGTATG
25557 CTTACACTAGGAATGAACTCCGTATG
1 CTTACACTAGGAATGAACTCCGTATG
25583 C
1 C
25584 CTATGTCACA
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
CTTACACTAGGAATGAACTCCGTATG
Found at i:32995 original size:26 final size:26
Alignment explanation
Indices: 32966--33018 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
32956 CTGGTCCGAT
32966 CTTACACTGGGAAAGAACTCCGTATG
1 CTTACACTGGGAAAGAACTCCGTATG
* *
32992 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAAAGAACTCCGTATG
33018 C
1 C
33019 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTACACTGGGAAAGAACTCCGTATG
Found at i:34776 original size:26 final size:26
Alignment explanation
Indices: 34736--34788 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
34726 TCAGTCTGAT
34736 CTTACATTGGAAATGAACTCCGTATG
1 CTTACATTGGAAATGAACTCCGTATG
* *
34762 CTTAGATTGGGAATGAACTCCGTATG
1 CTTACATTGGAAATGAACTCCGTATG
34788 C
1 C
34789 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTACATTGGAAATGAACTCCGTATG
Found at i:34916 original size:871 final size:866
Alignment explanation
Indices: 32345--35627 Score: 4008
Period size: 889 Copynumber: 3.7 Consensus size: 866
32335 CAGAGAGACA
* *
32345 GGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCA
1 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* * *
32410 TGCCAATGCCTTTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCCTCATGTGAAGTTT
66 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * * *
32475 AATGGCAAGACGACTCATTTTCTATTTTCCATAATTTTTGAAACTTTTTACGGTTC-AGGATTTT
131 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGA-GATTTT
* * * * *
32539 TTAAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTCGTT
195 TTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
*
32604 GGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAA
260 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGA-CATTTGAAAAAA
* * *
32669 GTGTCCCCATTTCAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
324 ATGT-CCCATTTCAGACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
32734 AAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
388 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * *
32799 ACCCATCACACATCATGTGTGCA-A----AC-CCCCCAATCGCCGGAACCCCAATGCCGTCGGTC
453 ACCCAT-GCACATCATGTGCGCACACCCCGCACCCCCAATCGTCGGAACCCCAATGCCGTCGGTC
* * * * * * *
32858 AGGTTCTCCTGGCGATGCTCCGGCGATGGTGCCTCGGGTGAAAAAAATACG-G-CACCAGGACAT
517 AGGTTCTCC-GGTGATGCTCCGACGATGGTGCCCCGGG-CAAAAAAAAAAGTGACACCAGCACAT
** * **
32921 GCTTGAGCCCAGCATGTGCACCCGCAACCCTCGGTCTGGTCCGATCTTACACTGGGAAAGAACTC
580 GCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCAGTCCGATCTTACACTGGGAAAGAACTC
** * * ** * *
32986 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAGCGTGCGGGCG
645 CGTATGCTTAGACTGGGAATGAACTCCACAAGCCTAAATCAACCCATGAAACGAGCGTACGGGCG
* * * * * * *** * *
33051 CTCAGCCGGCCAGAGGGGCAGGATGCGCAAGTCAGGGATCGATTGGGTC-CCCACCTACGTGCTA
710 CTCAACTGGCCAGACGGGCAGGATGCACAAGCCAGGGATAGGCCGGGTCTCCC-CCTACATGCTG
* *** * * ** * * * * *
33115 CCGATCTTGCTACCGCAACCCTTGGTCTGATCCGATCTTAGACTTGGAATGAACTCCGTATGCCT
774 CCGAACCAACTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCG
*
33180 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGATAGGCA
839 AAGCCAACCGAC-AAACGA---------C--G----A-----G-C----AGGCG
* * *
33234 GGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTACCA
1 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
33299 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
66 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * *
33364 CATGGCAAGACGACTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTTGGGATTTTT
131 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTT
* * *
33429 TTAAACTTTTTTCAGAAAGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTG
196 TTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
*
33494 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGCACAGGATTTTGTGATCATTTGAAAAAAA
261 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGA-CATTTGAAAAAAA
*
33559 TGTCACCATTTCAGACACTTTAATGGATACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTA
325 TGTC-CCATTTCAGACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
33624 AGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
389 AGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * *
33689 CCCATTGCACATCATGTGCACACACCCCCCCGACCCCCAATCGCCGGAACCCCAATGCCGTCGGT
454 CCCA-TGCACATCATGTGCGCACA-CCCCGC-ACCCCCAATCGTCGGAACCCCAATGCCGTCGGT
* *
33754 CAGGTTCTTCGGTGATGCTCCGACGATGGTGCCCCGGGCAAAAAAAAAA-T-ACAGTTCCAGCAT
516 CAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGGCAAAAAAAAAAGTGACA---CCAGCAC
* *
33817 ATGCCCAAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCCGATCTTACACTGGGAAAGAAC
578 ATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCAGTCCGATCTTACACTGGGAAAGAAC
* * * *
33882 TTCGTATGCTTAGACTGGGAATGAACTCTACAAGCCTAAATCAACCCATGAAATGAGCGTGCGGG
643 TCCGTATGCTTAGACTGGGAATGAACTCCACAAGCCTAAATCAACCCATGAAACGAGCGTACGGG
* *
33947 CGCTCAACTGGCCAGACGGGCAGGATGCACAAGCCGGGGATAGGTCGGGTCTCCCCCTACATGCT
708 CGCTCAACTGGCCAGACGGGCAGGATGCACAAGCCAGGGATAGGCCGGGTCTCCCCCTACATGCT
* *
34012 GCTGAACCAACTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCC
773 GCCGAACCAACTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCC
* *
34077 TAAGCCAATCGACGAAACGA-GAG-AGGCG
838 GAAGCCAACCGAC-AAACGACGAGCAGGCG
*
34105 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCCA
1 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
34170 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
66 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
*
34235 CATGGCACGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTT
131 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTT
34300 TTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTT-GTAGACGTGATCCTTGTATTTTTGTTG
196 TTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * *
34364 GCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACAAGTTGAAAAAAT
261 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGAC-ATTTGAAAAAAA
* * *
34429 TGTCCTCATTTTAGACACTTTAATGGTTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTA
325 TGTCC-CATTTCAGACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
34494 TGGGGTTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCCAA-TACCAGC
389 AGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG-CCAAGTACCAGC
* *
34558 ACCCACTGCACATCATGTGCGCACACCACCTGGCCCCCGCCAATCGTCGGAACCCCAATGCCGCC
453 ACCCA-TGCACATCATGTGCGCACACC-CC--GCACCC-CCAATCGTCGGAACCCCAATGCCGTC
* * * * *
34623 GATCAGGTTCTCCGGTGATGCTGCGGCGATGGTGCCTCGGGCAAAAAAAAAATGTGACACTAGCA
513 GGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGGCAAAAAAAAAA-GTGACACCAGCA
* * * * * * * *
34688 CATGCCTGAGCCTAGCATGTGC-CCCTTCCACCCTTGGTTCAGTCTGATCTTACA-TTGGAAATG
577 CATGCCCGAGCCCAGCATGTGCACCC-ACAACCCTCGGTCCAGTCCGATCTTACACTGGGAAA-G
* ** * * *
34751 AACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTAT
640 AACTCCGTATGCTTAGACTGGGAATGAACTCCACAAGCCTAAATCAACCCATGAAACGAGCGTAC
* * * * * *
34816 GGGCGCTCAGCTGGCCAGAGGGGTAGGATGCACAAGTCAGGGATCGGCCGGGTC-CCCCCTACGT
705 GGGCGCTCAACTGGCCAGACGGGCAGGATGCACAAGCCAGGGATAGGCCGGGTCTCCCCCTACAT
* *** * * *
34880 GCTGCCGATCTTGCTGCCACAACCCTCAGTCCGGTCCTATCTTAGATTGGGAATGAACTTTGTAT
770 GCTGCCGAACCAACTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTAT
*
34945 GCCGAAGCCAACCGACAAACGAGCGAGCGGGCG
835 GCCGAAGCCAACCGACAAACGA-CGAGCAGGCG
*
34978 GGCACTATGTCGACCAGAGAGACGGGATGCACAAGCCATGGATCGATAGGGTGGTAGATGGGTTT
1 GG----ATG-CG--C------A----A-GC-C--G---TGGATCGATAGGGTGGTAGGTGGGTTT
* ** *
35043 AGGCACATCTTCATATTTCTGCTATGCCAATTACATTTTTATGGCTTGTAAATACATACAATGGT
42 AGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * **
35108 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGATTTTCAA
107 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
35173 AACTTTTTACGGTTCGAGATTTTTTT--AA-------AG---GAGTTTTGGCCCC-AACTTGGTA
172 AACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTA
*
35225 GATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAG
237 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAG
* * * *
35290 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTGCTGGCAACAAAC
302 GATTTTGTGA-CATTTGAAAAAAATGT-CCCATTTCAGACACTTTAATGGATACTGGCAGCAAAC
* * *
35355 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTGTGAAGAGGGATAGGGGGC
365 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
* * **
35420 CAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCC-CGCCCCCAATAA
430 CAATATAAGGGCCAAGTACCAGCACCCAT-GCACATCATGTGCGCACACCCCGCACCCCCAATCG
* ** *
35484 TCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTACCCCGGGCAAAA
494 TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGGCAAAA
* * ** *
35549 AAAAATACG-G-CACCAGCACATGCCCGAGCCCAGCATGTGCAACCGCAATGCTCGGTCCGGTCC
559 AAAAA-A-GTGACACCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCAGTCC
*
35612 GATCTTACACTAGGAA
622 GATCTTACACTGGGAA
35628 TGAATTCTGT
Statistics
Matches: 2119, Mismatches: 211, Indels: 137
0.86 0.09 0.06
Matches are distributed among these distances:
869 4 0.00
870 231 0.11
871 321 0.15
872 223 0.11
873 6 0.00
874 1 0.00
875 3 0.00
877 4 0.00
878 2 0.00
879 47 0.02
880 75 0.04
881 6 0.00
882 1 0.00
884 12 0.01
885 233 0.11
886 5 0.00
888 3 0.00
889 437 0.21
890 3 0.00
891 2 0.00
892 1 0.00
894 1 0.00
895 13 0.01
896 25 0.01
897 213 0.10
898 244 0.12
899 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (866 bp):
GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTT
TTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACATTTGAAAAAAAT
GTCCCATTTCAGACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
CATGCACATCATGTGCGCACACCCCGCACCCCCAATCGTCGGAACCCCAATGCCGTCGGTCAGGT
TCTCCGGTGATGCTCCGACGATGGTGCCCCGGGCAAAAAAAAAAGTGACACCAGCACATGCCCGA
GCCCAGCATGTGCACCCACAACCCTCGGTCCAGTCCGATCTTACACTGGGAAAGAACTCCGTATG
CTTAGACTGGGAATGAACTCCACAAGCCTAAATCAACCCATGAAACGAGCGTACGGGCGCTCAAC
TGGCCAGACGGGCAGGATGCACAAGCCAGGGATAGGCCGGGTCTCCCCCTACATGCTGCCGAACC
AACTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCGAAGCCAA
CCGACAAACGACGAGCAGGCG
Found at i:35787 original size:203 final size:201
Alignment explanation
Indices: 35435--35834 Score: 505
Period size: 203 Copynumber: 2.0 Consensus size: 201
35425 TAAGGGCCAA
* *
35435 GTACCAGCACCCATCACACATCATGTGCGCACACCCCCGCCCCCAATAATCGAAACCCCAATGCC
1 GTACCAGCACCCATCACACATCAAGTGCGCACACCCCCGCCCCCAATAATCGAAACCCCAATCCC
* * * * ** *
35500 GTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTACCCCGGGCAAAAAAAAATACGGCACCAG
66 GTCGATCAAGTTCTCCGACGATGCTCAGACGATGGTACCCCAGGCAAAAAAAAATACAACACCAC
** *
35565 CACATGCCCGAGCCCAGCATGTGCAACCGCAATGCTCGGTCCGGTCCGATCTTACACTAGGAATG
131 CACATGCCCGAGCCCAGCATGTGCAACCGCAACCCTCGGTCCAGTCCGATCTTACACTAGGAATG
35630 AATTCT
196 AATTCT
* * **
35636 GTACTAGCACCCATCGCACATCAAGTGCGCACAACCCCCCGCCCCCAATCGTCGAAACCCCAATC
1 GTACCAGCACCCATCACACATCAAGTGCGCAC-A-CCCCCGCCCCCAATAATCGAAACCCCAATC
* * * * ** *
35701 CCGTCGATCAAGTTCTCCGGCGATGCT-ATAGCGATGGTGCCTCAGGTGAAAAAAAATGCAACAC
64 CCGTCGATCAAGTTCTCCGACGATGCTCAGA-CGATGGTACCCCAGGCAAAAAAAAATACAACAC
* * * * * *
35765 CACCACATGCCCGAGGCCAGCATGTGCACCCGTAACCCTTGGTTCAGTCCGATCTTACACTGGGA
128 CACCACATGCCCGAGCCCAGCATGTGCAACCGCAACCCTCGGTCCAGTCCGATCTTACACTAGGA
35830 ATGAA
193 ATGAA
35835 CTCCGTATGC
Statistics
Matches: 167, Mismatches: 29, Indels: 4
0.83 0.14 0.02
Matches are distributed among these distances:
201 29 0.17
202 2 0.01
203 136 0.81
ACGTcount: A:0.27, C:0.35, G:0.21, T:0.17
Consensus pattern (201 bp):
GTACCAGCACCCATCACACATCAAGTGCGCACACCCCCGCCCCCAATAATCGAAACCCCAATCCC
GTCGATCAAGTTCTCCGACGATGCTCAGACGATGGTACCCCAGGCAAAAAAAAATACAACACCAC
CACATGCCCGAGCCCAGCATGTGCAACCGCAACCCTCGGTCCAGTCCGATCTTACACTAGGAATG
AATTCT
Found at i:36137 original size:26 final size:26
Alignment explanation
Indices: 36101--36153 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
36091 CTGGTCCGAT
36101 CTTACACTGGGAATGAACT-TCGTATG
1 CTTACACTGGGAATGAACTCT-GTATG
*
36127 CTTAGACTGGGAATGAACTCTGTATG
1 CTTACACTGGGAATGAACTCTGTATG
36153 C
1 C
36154 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCTGTATG
Found at i:38219 original size:870 final size:873
Alignment explanation
Indices: 36506--38715 Score: 2914
Period size: 870 Copynumber: 2.5 Consensus size: 873
36496 TCAAATGGAT
* * ** * * *
36506 TTTTGGTCCCAAAGTTATTAGACGTGATCCTTGTATTTTTGTTGG-ATTGCACAAAAAAATTCAG
1 TTTTGGCCCCAAACTTGGTAGACGTCATCCTTGTATTTTTCTTGGCA-TGCACAAAACAATTCAG
* * * *
36570 TTAAAAACTC-AAGGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTTAGACACT
65 CTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACT
* * * * *
36634 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGA
129 TTAATGGCTACTAGCAACAAACCTGTAAAATCTCAAAGGCCCTTTAAGGGGGTGTGAGTTCTCGA
* *
36699 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
194 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGC
* ** * * * * * * *
36764 GCACACCCCCTGCCCCTCCAATC-GCTAGAACCCGAATGCCGCCGATCAAGTTCTCCGACGATGC
259 ACACACCCCCCCCCCCCCCAATCACCGA-AACCCCAACGCCGCCGATCAGGTTCTCCGACAATGC
* * ** * * * * * ** * * *
36828 TCCGGCGATGGTGCCCCGGATG-AAAAAAAATACGGTACTAGTACATGCCTAAGCCCAACTTGTG
323 TCCGACGATGGTGCCCAGGGCGAAAAAAAAATGCAGAACCAGCACATGCCCGAGCCCAGCATCTG
* * *
36892 CGCCCGCAACCCTCGGTCCGATCTGATCTTACACTGGAATGAACTACATATGCTTAGACTGGGAA
388 CACCCACAACCCTCGGTCCGATCCGA---T---C-----T----TAC--A--C-T----TGGGAA
* * *
36957 TGAACTCCGTATGCCTAAGTCAACCCAAGAAACGAGGGTGCGGGCGCTCAACCGGCCAGAGGGGC
429 TGAACTCCGTATGCCTAAGTCAACACAAGAAACGAGCGTGCGGACGCTCAACCGGCCAGAGGGGC
* * * * *
37022 AGGATGCACAAGTCGGGGATCGGCCGTGTCCCCCCCTGCATGCTACCGATCCTACTTCCATAACC
494 AGGATGCACAAGCCGAGGATCGGCCGGGTCCCCCCCTGCATGCTACCGATCCTACTGCCACAACC
* * * *
37087 CTCAGTCTGGTCTGATCTTAGAATGGGAATGAATTCCGTATGCCTAAGCCAACCGACGAAACGAA
559 CTCAGTCTGATCTGATCTTAGAATGGGAATGAACTACGTATGCCTAAGCCAACCGACAAAACGAA
* * * * *
37152 CGGGCGGGCGGGCACTACACTGGCCGGAGAAGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
624 CGGCCGGACGGGCACTACACTGACCGAAAAAGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* *
37217 AGGTGGGTTTAGGCACCTCTTCATATTTTTGCTGTGCCAATGCCATTTTTATGGCTTGTAAATTC
689 AGGTGGGTTTAGGCACATCTTCATATTTTTGCCGTGCCAATGCCATTTTTATGGCTTGTAAATTC
* * *
37282 ATTCAATGGTCCCTTAAGCCTTCATGCTAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
754 ATACAATGGTCCCTTAAGCCTTCATGCTAAGTTTCATCGCAAGACGACTCGTTTTATATTTTTCA
37347 CGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGAAGGAA
819 CGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGAAGGAA
* * *
37402 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATTCACAAAACAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTCATCCTTGTATTTTTCTTGGCATGCACAAAACAATTCAGC
*
37467 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
* * * * *
37532 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAAGGGGGTGTGAGTTCTTGAG
131 AATGGCTACTAGCAACAAACCTGTAAAATCTCAAAGGC-CCTTTAAGGGGGTGTGAGTTCTCGAG
* * **
37597 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACT-TCCCCCATCGCACATCATGTGTG
195 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCA
*
37661 CACACCCCCCCACCCCCCCAATCACCGAAACCCCAACGCCGCCGATCAGGTTCTCTGACAATGCT
260 CACACCCCCCC-CCCCCCCAATCACCGAAACCCCAACGCCGCCGATCAGGTTCTCCGACAATGCT
* * * * * ** *
37726 CGGGCGATGTTTCCCTA-GGTG-AAAAAAAATGTGGAACCAGCACATGCCCGAGCCCAGCATGTG
324 CCGACGATGGTGCCC-AGGGCGAAAAAAAAATGCAGAACCAGCACATGCCCGAGCCCAGCATCTG
*
37789 CACCCACAACCCTCGGTCCGATCCGATCTTGCA-TTGGGAATGAACTCCGTATGCCTAAGTCAAC
388 CACCCACAACCCTCGGTCCGATCCGATCTTACACTTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * ** *
37853 ACATGAAACGAGCGTGCGGATGCTCAGCCGGCCAGAGGGGTAGGATGCGTAAGCCGAGGATCGGT
453 ACAAGAAACGAGCGTGCGGACGCTCAACCGGCCAGAGGGGCAGGATGCACAAGCCGAGGATCGGC
* * * * *
37918 CGGGT-CCCCCCTGCGTGCTATCGATCCTGCTGCTACAACCCTCAGTCTGATCTGATCTTAGATT
518 CGGGTCCCCCCCTGCATGCTACCGATCCTACTGCCACAACCCTCAGTCTGATCTGATCTTAGAAT
* ** *
37982 GGGAATGAACTATGTATGCCTAAGCCAACCGACAAAACGAGTGGCCGGACGGGCACTACGCTGAC
583 GGGAATGAACTACGTATGCCTAAGCCAACCGACAAAACGAACGGCCGGACGGGCACTACACTGAC
*
38047 C-AAAAAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA-GTGGGTTTAGGCACATCTTCA
648 CGAAAAAG-CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* *
38110 TATTTTTGCCGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTC
712 TATTTTTGCCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
*
38175 ATG-TGAAGTTTCATCGCAAGACGACTCGTTTTATATTTTTCACGATTTTTGAAACTTTTTATGG
777 ATGCT-AAGTTTCATCGCAAGACGACTCGTTTTATATTTTTCACGATTTTTGAAACTTTTTACGG
* *
38239 TTTGAGATTTTTTTAAAATTTTTTCAGAAGGAG
841 TTCGAGATTTTTTTAAAATTTTTTCAGAAGGAA
*
38272 TTTTGGCCCCAAACTTGGTAGACGTCATCCTTTTATTTTTCTTGGCATGCACAAAACAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTCATCCTTGTATTTTTCTTGGCATGCACAAAACAATTCAGC
38337 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
38402 AATGGCTACTAGCAACAAACCTGTAAAATCTCAAAGGCCCTTTAAGGGGGTGTGAGTTCTCGAGG
131 AATGGCTACTAGCAACAAACCTGTAAAATCTCAAAGGCCCTTTAAGGGGGTGTGAGTTCTCGAGG
38467 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCAC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCAC
* * * * * * *
38532 ACACCCCCCCCGCCCCCAATCACTGGAACCCCAATGCCGCTGGTCAGGTTCTCCGACGATGCTCC
261 ACACCCCCCCCCCCCCCAATCACCGAAACCCCAACGCCGCCGATCAGGTTCTCCGACAATGCTCC
* *
38597 GACGATGGTGCCCAGGGCGAAAAAAAAATGCAGCACCAGCACATGCTCGAGCCCAGCATCTGCAC
326 GACGATGGTGCCCAGGGCGAAAAAAAAATGCAGAACCAGCACATGCCCGAGCCCAGCATCTGCAC
* *
38662 CCACAACCCTCGGTCTGATCTGATCTTACACTTGGGAATGACAACTCCGTATGC
391 CCACAACCCTCGGTCCGATCCGATCTTACACTTGGGAATG--AACTCCGTATGC
38716 TTAGACTAAG
Statistics
Matches: 1177, Mismatches: 123, Indels: 51
0.87 0.09 0.04
Matches are distributed among these distances:
868 1 0.00
869 125 0.11
870 432 0.37
871 149 0.13
872 87 0.07
873 12 0.01
876 1 0.00
880 1 0.00
882 2 0.00
886 1 0.00
891 1 0.00
894 1 0.00
896 182 0.15
897 180 0.15
898 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (873 bp):
TTTTGGCCCCAAACTTGGTAGACGTCATCCTTGTATTTTTCTTGGCATGCACAAAACAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
AATGGCTACTAGCAACAAACCTGTAAAATCTCAAAGGCCCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCAC
ACACCCCCCCCCCCCCCAATCACCGAAACCCCAACGCCGCCGATCAGGTTCTCCGACAATGCTCC
GACGATGGTGCCCAGGGCGAAAAAAAAATGCAGAACCAGCACATGCCCGAGCCCAGCATCTGCAC
CCACAACCCTCGGTCCGATCCGATCTTACACTTGGGAATGAACTCCGTATGCCTAAGTCAACACA
AGAAACGAGCGTGCGGACGCTCAACCGGCCAGAGGGGCAGGATGCACAAGCCGAGGATCGGCCGG
GTCCCCCCCTGCATGCTACCGATCCTACTGCCACAACCCTCAGTCTGATCTGATCTTAGAATGGG
AATGAACTACGTATGCCTAAGCCAACCGACAAAACGAACGGCCGGACGGGCACTACACTGACCGA
AAAAGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
TTTGCCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGC
TAAGTTTCATCGCAAGACGACTCGTTTTATATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA
GATTTTTTTAAAATTTTTTCAGAAGGAA
Done.