Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168038.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_290, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38551

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1822--1868
23
2.0
25
83
8
62
70
6
6
17
1.30
1866--1950
43
2.0
43
92
0
143
37
12
5
43
1.68
12216--12243
11
2.5
11
100
0
56
14
0
7
78
0.95
12997--13070
30
2.5
30
84
0
85
33
17
1
47
1.56
14992--15107
25
5.2
23
67
16
66
31
0
6
62
1.19
15082--15143
25
2.3
26
81
13
72
33
0
3
62
1.11
15560--15632
31
2.4
31
88
4
103
23
26
23
27
2.00
15692--15731
19
2.0
20
90
4
64
27
25
20
27
1.99
15695--15738
19
2.3
19
84
0
61
25
29
22
22
1.99
15956--15998
5
8.6
5
89
0
68
23
41
34
0
1.55
16018--16085
15
4.6
14
70
19
50
10
2
7
79
1.03
16076--16100
11
2.3
11
100
0
50
0
8
0
92
0.40
16090--16699
155
3.9
153
90
5
913
29
14
17
38
1.89
20354--20400
8
5.9
8
80
9
51
80
0
14
4
0.85
21626--22162
42
13.0
41
91
4
773
21
17
24
35
1.95
22169--22242
9
8.2
9
88
10
107
90
9
0
0
0.45
22172--22242
37
1.9
37
94
2
126
90
9
0
0
0.46
22169--22242
1
74.0
1
80
0
85
90
9
0
0
0.45
22579--22609
3
10.7
3
93
6
55
29
0
0
70
0.87
23035--23107
31
2.4
31
86
4
103
21
24
24
28
1.99
23171--23212
19
2.2
19
91
0
66
26
30
23
19
1.98
23432--23474
5
8.6
5
89
0
68
23
41
34
0
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23556--24019
160
3.0
154
90
5
743
28
15
17
38
1.90
23556--24013
152
3.0
152
91
3
736
28
15
17
38
1.90
29137--29175
20
2.0
20
84
0
51
15
7
0
76
0.99
32916--33262
170
2.0
170
91
2
563
49
9
7
33
1.64
33278--33319
21
2.0
21
85
0
57
64
2
2
30
1.19
33807--33890
32
2.5
34
81
14
104
55
0
3
40
1.17
37814--37918
52
2.0
52
88
3
158
26
24
7
40
1.82

Tables:   1

The End!