Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168039.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38386

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1651--1709
31
1.9
31
89
6
93
27
23
22
27
1.99
1763--1805
19
2.3
19
91
0
68
27
27
18
25
1.98
2106--2160
17
3.2
16
76
18
58
9
0
3
87
0.66
2187--2227
10
3.9
10
87
9
55
12
2
0
85
0.70
2193--2227
11
3.3
11
92
8
54
11
2
0
85
0.69
2187--2235
16
3.1
16
85
8
57
14
2
0
83
0.73
2187--2242
21
2.7
21
83
5
69
14
3
0
82
0.81
2106--2235
13
10.0
13
68
16
58
16
1
3
78
0.97
2189--2247
15
3.8
15
78
17
59
15
5
0
79
0.89
2254--2583
54
6.0
56
90
7
498
45
7
11
34
1.70
6487--6531
10
4.4
10
80
5
54
86
6
6
0
0.70
6485--6531
11
3.9
12
82
17
53
87
6
6
0
0.68
6488--6528
21
1.9
21
90
5
64
85
7
7
0
0.75
7727--8256
41
13.0
41
95
3
957
22
17
23
36
1.94
7727--8430
122
5.7
123
89
8
1097
22
17
24
36
1.95
7727--8256
81
6.5
82
96
3
957
22
17
23
36
1.94
8206--8311
55
1.9
55
100
0
212
24
16
29
30
1.96
8262--8430
41
4.2
40
91
6
252
24
17
25
33
1.96
8166--8352
96
2.0
95
96
1
347
23
17
27
32
1.96
8125--8390
136
2.0
134
93
3
462
23
17
25
33
1.96
8262--8430
79
2.1
81
90
3
261
24
17
25
33
1.96
8437--8576
1
140.0
1
82
0
154
90
6
0
3
0.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8437--8576
15
9.4
15
85
8
171
90
6
0
3
0.56
8436--8576
59
2.4
59
89
5
207
89
7
0
3
0.59
8749--8802
26
2.1
26
86
13
76
27
3
3
64
1.27
9268--9321
25
2.2
25
83
6
65
38
5
18
37
1.74
9331--9400
31
2.2
32
80
12
83
30
22
22
24
1.99
9453--9498
19
2.3
20
88
3
67
26
30
19
23
1.98
9838--9894
19
3.1
18
78
14
53
12
5
0
82
0.82
9850--9894
19
2.4
18
82
10
54
11
4
0
84
0.76
9856--9905
23
2.1
24
82
10
59
10
8
0
82
0.86
9934--10149
58
3.7
57
85
6
283
43
8
14
33
1.75
9944--10151
115
1.8
115
92
0
353
41
8
14
35
1.77
12122--12184
25
2.5
26
89
10
103
55
0
3
41
1.16
12512--12859
170
2.0
171
90
2
547
33
6
9
50
1.62
16601--16639
20
2.0
20
84
0
51
76
0
7
15
0.99
23294--23370
30
2.5
30
82
2
82
48
2
18
31
1.62
23472--23500
13
2.1
14
93
6
51
72
6
0
20
1.07
24133--24164
11
2.9
11
90
0
55
68
6
0
25
1.12
26816--26844
13
2.1
14
93
6
51
72
6
0
20
1.07
27858--27892
16
2.3
16
90
9
56
14
0
8
77
0.99
32484--32568
43
2.0
43
92
0
143
44
4
11
38
1.62
37282--37324
16
2.6
16
88
3
59
55
2
6
34
1.39

Tables:   1

The End!