Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168040.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38372

Tables:   1   

This is table  1  of  1  ( 50 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3449--3506
19
2.9
20
82
14
75
55
8
5
31
1.52
3449--3517
19
3.3
20
82
15
70
55
10
4
30
1.53
3568--3760
39
4.9
39
84
4
228
53
11
5
30
1.58
3553--3760
80
2.6
81
84
6
273
52
11
5
29
1.60
3771--3863
20
4.6
20
87
1
114
51
8
7
32
1.60
3850--3913
32
2.0
33
84
3
85
53
9
4
32
1.54
3887--3943
20
3.0
20
89
5
91
45
10
8
35
1.70
6319--6351
17
2.0
17
88
5
50
66
6
0
27
1.15
16104--16441
44
7.9
43
81
8
370
22
13
20
43
1.87
16097--16441
128
2.7
127
81
7
421
22
13
20
43
1.87
16637--16780
10
14.2
10
68
13
71
33
3
2
61
1.25
16648--16780
48
2.9
46
84
10
166
33
3
2
60
1.24
17022--17071
21
2.4
21
80
10
57
28
2
14
56
1.49
17646--17807
59
2.7
59
86
3
209
43
6
11
38
1.66
17870--17912
23
1.9
22
85
4
59
11
6
0
81
0.87
25052--25239
63
3.2
57
76
12
207
38
12
6
41
1.70
25201--25277
38
2.0
38
95
5
138
40
5
12
41
1.66
25239--25365
58
2.2
59
89
1
193
39
11
6
42
1.67
25378--25441
14
4.7
14
70
18
55
76
1
4
17
1.03
25383--25441
20
3.0
19
80
7
64
77
1
3
16
0.98
25811--25901
44
2.1
43
81
6
103
69
1
4
25
1.14
25870--25938
27
2.8
23
74
19
68
69
1
5
23
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25857--25926
27
2.5
29
78
19
78
70
1
5
22
1.17
25867--25938
25
2.9
24
76
13
74
69
1
5
23
1.17
25856--25905
17
2.9
17
88
5
57
72
0
4
24
1.02
27673--27736
20
3.0
21
78
17
69
84
0
12
3
0.74
27680--27736
30
1.9
30
89
7
89
85
0
10
3
0.70
27673--27728
21
2.9
18
86
10
67
83
0
14
1
0.72
27679--27729
11
4.5
11
90
5
75
86
0
11
1
0.66
28762--29230
42
10.9
43
78
9
415
22
12
21
43
1.85
28939--29120
88
2.1
87
86
5
251
22
12
21
43
1.85
28762--29227
86
5.4
86
77
12
315
22
12
21
43
1.85
29404--29444
4
10.5
4
80
15
50
21
2
2
73
1.07
29417--29574
38
4.3
38
68
13
98
33
3
1
61
1.23
29449--29566
24
5.0
25
70
20
85
35
3
1
59
1.24
29421--29491
34
2.1
34
82
10
85
30
2
1
64
1.16
29465--29576
24
4.8
24
76
15
110
35
3
1
58
1.26
29517--29602
17
5.4
17
72
14
58
30
3
1
65
1.17
29426--29594
48
3.7
47
70
19
135
32
3
1
62
1.23
30314--30375
3
19.7
3
90
6
88
29
1
0
69
0.98
30310--30384
27
2.9
25
88
9
98
29
1
1
68
1.06
30431--30571
58
2.5
57
78
15
173
45
7
10
36
1.66
30446--30571
58
2.2
58
85
7
177
45
7
11
35
1.69
33142--33172
16
1.9
16
93
0
53
32
6
9
51
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35784--35833
24
2.3
21
80
16
57
40
10
6
44
1.63
37470--37698
41
5.7
40
87
6
275
53
11
6
27
1.62
37479--37698
21
10.8
22
70
15
170
54
11
5
28
1.60
37480--37711
120
1.9
121
85
4
317
54
12
5
27
1.60
37784--37829
16
2.9
16
80
0
56
56
8
4
30
1.49
37803--37840
20
2.0
18
90
10
58
47
10
7
34
1.67

Tables:   1

The End!