Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167847.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 79960
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Warning! 1000 characters in sequence are not A, C, G, or T
Found at i:219 original size:26 final size:26
Alignment explanation
Indices: 190--242 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
180 CCGGTCCGAT
190 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
* *
216 CTTAGACTGGGAATGAACTCTGTATG
1 CTTACACTGGGAATGAACTCCGTATG
242 C
1 C
243 CTAAGTCAAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:508 original size:26 final size:26
Alignment explanation
Indices: 479--531 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
469 CCGGTCCGAT
479 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
505 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
531 C
1 C
532 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:2927 original size:26 final size:26
Alignment explanation
Indices: 2898--2950 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
2888 CCGATCCGAT
2898 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
**
2924 CTTAGTCTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
2950 C
1 C
2951 CTAAGTCAAA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:3793 original size:26 final size:26
Alignment explanation
Indices: 3743--3795 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
3733 CTGGTCCGAT
*
3743 CTTACACTGGGAATGAACTATGTATG
1 CTTACACTGGGAATGAACTACGTATG
* *
3769 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTACGTATG
3795 C
1 C
3796 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTACGTATG
Found at i:5568 original size:26 final size:26
Alignment explanation
Indices: 5539--5590 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
5529 CCGGTCTGAT
5539 CTTACACTCGGAATGAACTCCGTATG
1 CTTACACTCGGAATGAACTCCGTATG
* * *
5565 CTTAGATTGGGAATGAACTCCGTATG
1 CTTACACTCGGAATGAACTCCGTATG
5591 GCTAAGTCAA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.21, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTACACTCGGAATGAACTCCGTATG
Found at i:5600 original size:899 final size:894
Alignment explanation
Indices: 3431--7250 Score: 4822
Period size: 897 Copynumber: 4.3 Consensus size: 894
3421 TGACATGCAC
* * * *
3431 AAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTCGCAGCAAACCTGTAAAATCTCAAATGC
1 AAAAAGTGTCCCCATTTTAGACACTTTAA-TGCTACTGGCAGCAAACCTATAAAATCTCAAATGC
* * * *
3496 TCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGTGCGATAGGGGTG-CAGTATAAGGGCCAAGT
65 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG-GCCAATATAAGGGCCAAGT
** *
3560 ACCAATACCCATCACACATCATGTGCGCACACCCCCCTGCCCCCCAATCGCTGGAACCCCAATGC
129 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCAATCGCTGGAACCCCAATGC
** * *
3625 TGTAGGTCAGGTTCTCCGACGATGC-TCAGGCGATGGTGCCCCGAGCGAAAAAAACAATACT-GC
193 -GCCGGTCAGGTTCTCCGACGATGCTTC-GGCGATGGTGCCCCGAGTGAAAAAAA-AAT-GTGGC
* * *
3688 ACCAGCACATACCTGAGCCCAGCATGTGCACCCGCAACCCTTGGTCTGGTCCGATCTTACACTGG
254 ACCAGCACATGCCTGAGCCCAGCATGTGCACCCGCAACCCTTGGTCCGGTCTGATCTTACACTGG
* *
3753 GAATGAACTATGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAG
319 GAATGAACT-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * * * *
3818 CGTACGGGCGCTCAGCTGGCTAGAGGGGCAGGATGAGCAAGTCGGGGATCGGTCGGGTCCCCCCC
383 CATGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGAGCAAGCCGGGGATCGATCGGGTCCCCCCC
** * *** * * *
3883 TGTGTGGTGCCAATCCTACTGTTGCAACCTTCGGTCCGGTCTGATCTTAGATTGGGAATGAACTC
448 TACGTGCTGCCAATCCTACTGCCACAACCCTCGGTCCGGTCTGATCTTAAACTGGGAATGAACTC
* * *
3948 CGTATGCCTAAGCCAACCGACGAAGCGAGTGGGCGGGCGGGCACTACGCCGACCAGAGAGGCGAG
513 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGAG
* *
4013 ATGCGCAAGCCGTGGATCGATAGGGTGTTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
578 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
* *
4078 CCAATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCCTAAGCCTTCATGTGAAGTTTCA
643 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * *
4143 TGGCAAGACGACTCGTTTTCTA-TTTTCATGATTTTTTAAACTTTTTATGGGTT-GAGATTTTTT
708 TGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTA-CGGTTCGAGATTTTTT
* *
4206 TAAAATTTTTTCAGAAGAATTTTTGGCCCCACACTTGGTAGACATGATCCTTGTATTTTTGTTGG
772 TAAAATTTTTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGG
* * *
4271 TATGCACAAAAAAATTCAGCTAAAAGCTCGAAGTGTACAGGATTTTGTGACCATTTGA
837 CATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGA
* * *
4329 AAAAAGTGT-CCCATTTCAAACACTTTAATGCCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
1 AAAAAGTGTCCCCATTTTAGACACTTTAATG-CTACTGGCAGCAAACCTATAAAATCTCAAATGC
* * *
4393 TCTTTACGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTA
65 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * *
4458 CCAGCACCCATTGCACATCATGTGTGCACACCCCCCACCCCCCCAATCGCCGGAAGCCCAATGCC
130 CCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCAATCGCTGGAACCCCAATG-C
* * *
4523 GCCGGTCAGGTTTTCAC-AGCGATGC-TCTGGCGGTGGTGCCCC--GTGCAAAAAACAAATGCGG
193 GCCGGTCAGGTTCTC-CGA-CGATGCTTC-GGCGATGGTGCCCCGAGTG-AAAAAA-AAATGTGG
** * * ** *
4584 CACCAGCACATGCAC-GAGCATAGCATGTGCACCTGCAACCCTTGATCCACTCTGATATTACACT
253 CACCAGCACATGC-CTGAGCCCAGCATGTGCACCCGCAACCCTTGGTCCGGTCTGATCTTACACT
* * * *
4648 AGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCGGTATGCCGAAGTCAACCCACGAAACA
317 GGGAATGAAC-TCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * *
4713 AGCATGCGGGCGCTTAGCCGACCAGAGGGGCAGGGTGTGCAAGCCGGGGTTCGATCGGGT-CCCC
381 AGCATGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGAGCAAGCCGGGGATCGATCGGGTCCCCC
* * * * * *
4777 CCTACGTGCTGCCGATCCTACTGCCACAACCCTTGGTCTGATCTAATCTTAAAATGGGAATGAAC
446 CCTACGTGCTGCCAATCCTACTGCCACAACCCTCGGTCCGGTCTGATCTTAAACTGGGAATGAAC
** * * * * *
4842 TTTGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGAGGGCACTACACCGATCAGAGAGGC-
511 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACG
*
4906 AGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCC
576 A-GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCC
*
4971 ATGCCAATGCCATTTTTATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
640 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
* * *
5036 TCATGGCAAGACGACTCGTTTTAC-ATTTTTCACGATTTTTGAATCTTTTTACGGTTCGAGAATT
705 TCATGGCAAGACGACTCATTTT-CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTT
* * * ** * *
5100 TTTTAAAATTTTTTCAGAAAAATTTTTAGCCTGAAACTTGGTAGACATGATCGTTGTATTTTTTT
769 TTTTAAAATTTTTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGT
* * *
5165 TGGCATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTATAGGATTTTGTGACCATTCGA
834 TGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGA
* * * *
5226 AAAAAGTGTCCCTAATTTTAAACACTTTATTAGCTACTGGCAGCAAACCTATAAATTCTCAAATG
1 AAAAAGTGTCCC-CATTTTAGACACTTTAAT-GCTACTGGCAGCAAACCTATAAAATCTCAAATG
* * * *
5291 CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAAGAGGGATAAGGGCCCAATATAAGGGCCAAGT
64 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
5356 ACCAGCACCCATCGCACATCATGTGCGCACAACCCCCCGCCCCTCCAATTGTTTGAACCCCAATG
129 ACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCGCCCC-CCAATCGCTGGAACCCCAATG
* * * *
5421 TCGCCGGTCAGGTTCTCTGACGATGCTTCGACGATGGTG-CCCTAGGTGAAAAAAAAGTGTGGCA
192 -CGCCGGTCAGGTTCTCCGACGATGCTTCGGCGATGGTGCCCCGA-GTGAAAAAAAAATGTGGCA
* ** * *
5485 CCAGCACATGCCTGAGCCTAGCATGTGCACCTACAACACTTGGTCCGGTCTGATCTTACACTCGG
255 CCAGCACATGCCTGAGCCCAGCATGTGCACCCGCAACCCTTGGTCCGGTCTGATCTTACACTGGG
* * *
5550 AATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGGCTAAGTCAACCCATGAAACGAG-
320 AATGAACT-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * *
5614 AGTGCGGGCGCTCAGTCTG-CCAGAGGGGCAGGATGGGCAAGCAGGGGATCGGTCAGGTCCCCCC
384 A-TGCGGGCGCTCAG-CCGACCAGAGGGGCAGGATGAGCAAGCCGGGGATCGATCGGGTCCCCCC
* *** * * * * * *
5678 CTACGAGCTGTTGATCCTGCTGCCATAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAAAT
447 CTACGTGCTGCCAATCCTACTGCCACAACCCTCGGTCCGGTCTGATCTTAAACTGGGAATGAACT
* ** * * * *
5743 CCGTATGCCTAAGCCAATCGACGAAACGAGCGGGTAGGCGGGCACTCCGCCGGCCAGAAAGACGG
512 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGA
* * *
5808 GATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGACACATCTTCATATTTTTGCCAT
577 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCAT
5873 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA--TGAAGTTTC
642 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * *
5936 ATGGCAAGACGACTCATTTTCTATTTTTCACAATTTTTGAAACCTTTTACGGTTCAAGATTTTTT
707 ATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT
* * * *
6001 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTTTTGG
772 TAAAATTTTTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGG
6066 CATGCACAAAAAAATTCAGCTAAAAACTCGAAA-TGTACAGGATTTTGTGACCATTTGA
837 CATGCACAAAAAAATTCAGCTAAAAACTC-AAAGTGTACAGGATTTTGTGACCATTTGA
*
6124 AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAATCTATAAAATCTCAAATGC
1 AAAAAGTGTCCCCATTTTAGACACTTTAAT-GCTACTGGCAGCAAACCTATAAAATCTCAAATGC
* * * *
6189 TCTTTAAGGGGGTGTGAGTTCTCGACGTTTCATGAGCGATAGGGGTCCAATATAAGGGCCAAGTA
65 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
6254 CCAGCATCCATCGCACATCATGTGCGCACACCCACCGCCCCCCAATCGCTAGAACCCCAATGCCG
130 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCAATCGCTGGAACCCCAATG-CG
* * * * * * * *
6319 CCGGTTAAGTTCTCC-AGCGATGCTACGGTGATGGTGCCCCGAGCG-AAAAAAAATGCGACATCA
194 CCGGTCAGGTTCTCCGA-CGATGCTTCGGCGATGGTGCCCCGAGTGAAAAAAAAATGTGGCACCA
* *
6382 GCACATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCT-GTCCGGTCTGATCTTACTCTGGGAA
258 GCACATGCCTGAGCCCAGCATGTGCACCCGCAACCCT-TGGTCCGGTCTGATCTTACACTGGGAA
* * *
6446 TG-A-----A--CTT---C------T--A------A-GCCTAAGTCAACCCATG-ACCTGAGCGT
322 TGAACTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC-GAGCAT
* * ** * *
6484 GCGGGCGCTCAGCC-AGCTACAGGGGCAGGATGCA-CAAGTTGGGGATTGACCGGGTCCCCCCCT
386 GCGGGCGCTCAGCCGA-CCAGAGGGGCAGGATG-AGCAAGCCGGGGATCGATCGGGTCCCCCCCT
* * * ** *
6547 -GGATGCTGCCAATCCTACTACCGCAACCCTCAATCCGGTCTGATCTTCAACTGGGAATGAACTC
449 ACG-TGCTGCCAATCCTACTGCCACAACCCTCGGTCCGGTCTGATCTTAAACTGGGAATGAACTC
* * * * *
6611 CGTATGCCTAAGCCAACCGACGAAATGAGAGGGCGGGCGGGCACTACGTCGGCCAGAGTGACGAG
513 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGAG
* *
6676 ATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTTTGCCATG
578 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
* *
6741 CCAATGCCATTTTAATGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
643 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
*
6806 TGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTT-CTGGTTCCAGATTTTTT
708 TGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTAC-GGTTCGAGATTTTTT
* *
6870 TAAAATTTTTTCAGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
772 TAAAATTTTTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGG
* * * ** *
6934 CATGCATAAAAAAATTTAGCTAAAAATTGGAAGTGTACAAGATTTTGTGACCATTTGA
837 CATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGA
6992 AAAAAGTGTCCCCATTTTAGACACTTTAATTGCTACTGGCAGCAAACCTGA-AAAATCTCAAATG
1 AAAAAGTGTCCCCATTTTAGACACTTTAA-TGCTACTGGCAGCAAACCT-ATAAAATCTCAAATG
* *
7056 CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGT
64 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
** *
7121 ACCAGCACTAATCGCACATCATGTGCG-ACACCCCCCACCCCCCCAATCG-TCGGAACCCCAATG
129 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCAATCGCT-GGAACCCCAATG
* * *
7184 CTGCCAGTTAGGTTCTCCGGCGATGCTTCGGCGATGGTGCCCCGAGTGAAAAAAAAATGTGGCAC
192 C-GCCGGTCAGGTTCTCCGACGATGCTTCGGCGATGGTGCCCCGAGTGAAAAAAAAATGTGGCAC
7249 CA
256 CA
7251 TTCCTTGGGC
Statistics
Matches: 2556, Mismatches: 314, Indels: 133
0.85 0.10 0.04
Matches are distributed among these distances:
866 4 0.00
867 294 0.12
868 290 0.11
869 112 0.04
874 1 0.00
876 1 0.00
885 3 0.00
887 1 0.00
893 1 0.00
894 72 0.03
895 52 0.02
896 279 0.11
897 626 0.24
898 228 0.09
899 317 0.12
900 272 0.11
901 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (894 bp):
AAAAAGTGTCCCCATTTTAGACACTTTAATGCTACTGGCAGCAAACCTATAAAATCTCAAATGCT
CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
CAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCAATCGCTGGAACCCCAATGCGCC
GGTCAGGTTCTCCGACGATGCTTCGGCGATGGTGCCCCGAGTGAAAAAAAAATGTGGCACCAGCA
CATGCCTGAGCCCAGCATGTGCACCCGCAACCCTTGGTCCGGTCTGATCTTACACTGGGAATGAA
CTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGG
CGCTCAGCCGACCAGAGGGGCAGGATGAGCAAGCCGGGGATCGATCGGGTCCCCCCCTACGTGCT
GCCAATCCTACTGCCACAACCCTCGGTCCGGTCTGATCTTAAACTGGGAATGAACTCCGTATGCC
TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGAGATGCGCAA
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCC
ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
CGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTT
TTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAA
AAAAATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGA
Found at i:10671 original size:26 final size:26
Alignment explanation
Indices: 10642--10694 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
10632 CTGATCCGAT
10642 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
10668 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
10694 C
1 C
10695 CTAAGTCCAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:11512 original size:26 final size:26
Alignment explanation
Indices: 11476--11526 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
11466 CCGATCTTAA
*
11476 ACTGGGAATGAACT-TCGTATGCCTAG
1 ACTGGGAATGAAATCT-GTATGCCTAG
11502 ACTGGGAATGAAATCTGTATGCCTA
1 ACTGGGAATGAAATCTGTATGCCTA
11527 AGTCAACCCA
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
26 22 0.96
27 1 0.04
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
ACTGGGAATGAAATCTGTATGCCTAG
Found at i:12169 original size:833 final size:829
Alignment explanation
Indices: 10529--12184 Score: 2354
Period size: 833 Copynumber: 2.0 Consensus size: 829
10519 TAATGCCACC
* **
10529 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAGCGAAAAAAAAATATGGCACCAGCA
1 GGTCAGGTTCTCCGACGATGCTCAGACGATGGTGCCCCGAGCGAAAAAAAAATACAGCACCAGCA
* * * *
10594 CATGCCCGATCCCAGCATGTGCACCCATAACCCTCGGTCTGATCCGATCTTACACTGGGAATGAA
66 CATGCCCGATACCAGCATGTGCACCCACAACCCTCGGTCAGATCCGATCTTAAACTGGGAATGAA
* * * *
10659 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCCACGAAACGAGTATGCAGGCGC
131 CTCCGTATGCCTAGACTGGGAATGAAATCCGTATGCCTAAGTCCACGAAACGACTATGCAGACGC
* ** * ** * * *
10724 TCAATCGGTCGGAGGGGCAAGATACGTAAGTCGATGATCGGTTGGGTCCCACCCTACGTGCTATC
196 TCAACCGACCAGAGGGGCAAGATACACAAGCCGAGGATCGGTCGGGTCCCACCCTACGTGCTATC
*
10789 GATCCTACTACCGTAACCCTCGATTTGGTCTGATCTTAGACTAGGAATGAACTCGTATGCCTAAG
261 GATCCTACTACCGTAACCCTCGATTCGGTCTGATCTTAGACTAGGAATGAACTCGTATGCCTAAG
* * *
10854 CCAACCGACAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGTGAGAAGCACAAGTCG
326 CCAACCGACAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGGCGAGAAGCACAAGCCG
*
10919 TGGATCGATAGGCTGGTAGGTGGGTTTACACACATCTTCATATTTCTGCCATGCCAATGCCATTT
391 TGGATCGATAGGCTGGTAGGTGCGTTTACACACATCTTCATATTTCTGCCATGCCAATGCCATTT
10984 TTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
456 TTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
** * ** **
11049 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTTTAATTTTTTCA
521 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGCTCAAGATTTTTTTAAAATTTTTTCA
* * * * * *
11114 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACA
586 GAAAGAGTTTTGGCCCCAAACTTCGTAGACATGATCCTTATATTTTTGTTGGCAGGCACAAAAAA
*
11179 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
651 ATTCAGCTAAAAACTCGAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
11244 ACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGCATGAGTT
716 ACACGTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGCATGAGTT
*
11309 CTCAAGGTTTGATGAGGGTTAGGGGCCAATATAAGGGCCAAGTACCGTT
781 CTCAAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCGTT
** * * * *
11358 GGTCAGGTTCTCCGGTGATGCTCTAG-CGATGGTGCCCCGGGTGAAAGAAAAATGCAGCACCAGC
1 GGTCAGGTTCTCCGACGATGCTC-AGACGATGGTGCCCCGAGCGAAAAAAAAATACAGCACCAGC
* ** *
11422 ACATGCCCGATACCAGCATGTGCGCCTGCAACCCTTGGTCCAG-TCCGATCTTAAACTGGGAATG
65 ACATGCCCGATACCAGCATGTGCACCCACAACCCTCGGT-CAGATCCGATCTTAAACTGGGAATG
* * * *
11486 AACTTCGTATGCCTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAATGAACT-TG
129 AACTCCGTATGCCTAGACTGGGAATGAAATCCGTATGCCTAAGT----CCACGAAACG-ACTATG
** * * * * * **
11550 CAGACGCTCGGCCGACCAGAGGGGTAGGATGCACAAGCCGGGGATCGGTCGGGTCCC-CTCTGTG
189 CAGACGCTCAACCGACCAGAGGGGCAAGATACACAAGCCGAGGATCGGTCGGGTCCCACCCTACG
* * *
11614 TGCTATTGATCCTGCTACCGTAACCCTC-ACTTCGGTCTGATCTTAGACTGGGAATGAACTCAGT
254 TGCTATCGATCCTACTACCGTAACCCTCGA-TTCGGTCTGATCTTAGACTAGGAATGAACTC-GT
* * * * *
11678 ATGCCTAAGCCAACCGACGAAATGAGTGGGCGGGCGGGCACTACGTCGGCCAAAGAGGCGAGATG
317 ATGCCTAAGCCAACCGACAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGGCGAGAAG
** * ***
11743 CGTAAGCCGTGGATCGATAGGGTGGTAGGTGCGTTTTGGCACATCTTCATATTTCTGCCATGCCA
382 CACAAGCCGTGGATCGATAGGCTGGTAGGTGCGTTTACACACATCTTCATATTTCTGCCATGCCA
* *
11808 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGTAGTTTCATGG
447 ATGCCATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
*
11873 CAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGCTCAAGATTTTTTTAAA
512 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGCTCAAGATTTTTTTAAA
11938 ATTTTTTCAGAAAGAGTTTTGGCCCCAAAC-TCGTAGACATGATCCTTATATTTTTGTTGGCAGG
577 ATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTCGTAGACATGATCCTTATATTTTTGTTGGCAGG
* *
12002 CA-AAAAAAATTTTAGCTAAAAACTCGAAGTGTATACGATTTTGTGACCATTTGAAAAAAGTGTC
642 CACAAAAAAA-TTCAGCTAAAAACTCGAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTC
* * **
12066 CCCATTTTAGACACGTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCGATGCTCTTTAAGGG
706 CCCATTTCAGACACGTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
** *
12131 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
771 GGCATGAGTTCTCAAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGT
12185 GCCGGCACCC
Statistics
Matches: 726, Mismatches: 90, Indels: 18
0.87 0.11 0.02
Matches are distributed among these distances:
829 146 0.20
830 3 0.00
831 7 0.01
832 229 0.32
833 339 0.47
834 2 0.00
ACGTcount: A:0.26, C:0.22, G:0.24, T:0.27
Consensus pattern (829 bp):
GGTCAGGTTCTCCGACGATGCTCAGACGATGGTGCCCCGAGCGAAAAAAAAATACAGCACCAGCA
CATGCCCGATACCAGCATGTGCACCCACAACCCTCGGTCAGATCCGATCTTAAACTGGGAATGAA
CTCCGTATGCCTAGACTGGGAATGAAATCCGTATGCCTAAGTCCACGAAACGACTATGCAGACGC
TCAACCGACCAGAGGGGCAAGATACACAAGCCGAGGATCGGTCGGGTCCCACCCTACGTGCTATC
GATCCTACTACCGTAACCCTCGATTCGGTCTGATCTTAGACTAGGAATGAACTCGTATGCCTAAG
CCAACCGACAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGGCGAGAAGCACAAGCCG
TGGATCGATAGGCTGGTAGGTGCGTTTACACACATCTTCATATTTCTGCCATGCCAATGCCATTT
TTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGCTCAAGATTTTTTTAAAATTTTTTCA
GAAAGAGTTTTGGCCCCAAACTTCGTAGACATGATCCTTATATTTTTGTTGGCAGGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACGTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGCATGAGTT
CTCAAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCGTT
Found at i:12401 original size:26 final size:26
Alignment explanation
Indices: 12372--12424 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
12362 CCGGTCTGAT
* *
12372 CTTACACTGTGAATGAACTCTGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
12398 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
12424 C
1 C
12425 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:13301 original size:26 final size:26
Alignment explanation
Indices: 13272--13324 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13262 CCGGTTCGAT
13272 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
13298 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
13324 C
1 C
13325 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:15398 original size:897 final size:897
Alignment explanation
Indices: 11353--26426 Score: 18667
Period size: 898 Copynumber: 16.9 Consensus size: 897
11343 GGGCCAAGTA
* * * ** * * * *
11353 CCGTTGGTCAGGTTCTCCGGTGATGCTCTAGCGATGGTGCCCCGGGTGAAAGAAAAATGCAGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
** * * * * * * *
11418 CAGCACATGCCCGATACCAGCATGTGCGCCTGCAACCCTTGGTCCAGTCCGATCTTAAACTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* * * * * * * *
11483 ATGAACTTCGTATGCCTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAATGAACT
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * * *
11548 TGCAGACGCTCGGCCGACCAGAGGGGTAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCTCTGT
196 TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTGC
*** * ** ** * * *
11613 GTGCTATTGATCCTGCTACCGTAACCCTCACTTCGGTCTGATCTTAGACTGGGAATGAACTCAGT
261 GTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * *
11678 ATGCCTAAGCCAACCGACGAAATGAGTGGGCGGGCGGGCACTACGTCGGCCAAAGAGGCGAGATG
326 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATG
* * *
11743 CGTAAGCCGTGGATCGATAGGGTGGTAGGTGCGTTTTGGCACATCTTCATATTTCTGCCATGCCA
391 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
*
11808 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGTAGTTTCATGG
456 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* ** *
11873 CAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGCTCA-AGATTTTTTTAA
521 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTAGAGATTTTTTTAA
* * * * *
11937 AATTTTTTCAGAAAGAGTTTTGGCCCCAAAC-TCGTAGACATGATCCTTATATTTTTGTTGGCAG
585 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
12001 GCA-AAAAAAATTTTAGCTAAAAACTCGAAGTGTATACGATTTTGTGACCATTTGAAAAAAGTGT
650 GCACAAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGT
* * **
12065 CCCCATTTTAGACACGTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCGATGCTCTTTAAGG
714 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
12130 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCGGCACCC
779 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * *
12195 ATCACACGTCATGTACACACACCCTCTCCCCCGCCCCCGCAATCGTCGAAACCCCAATG
844 ATCGCACATCATGTGCGCACA--C-C-CCCCCGCCCCC-CAATCGTCGGAACCCCAATG
* * * * * * **
12254 TCGTCGGTCAGGTTCTCTGGCGATGCTCTGGTGATGGTGCCCCGAGCAAAAAAAAAATGCAACAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * * * * *
12319 CAGCACATGCTCAAGCCTAGCATGTGCACCTGTAACCCTCGATCCGGTCTGATCTTACACTGTGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* *
12384 ATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTACGAAACGAGCG
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * * *
12449 CGTGGGTGCTCAGCCGGCCAGAAGGGCAGGATGCGCAAGCCAGGGATCGATCGAGTCCCCCCTAC
196 TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTGC
* * *** * * **
12514 GTGTTGTCGATCCTGCTGCTGTATCCCTTGGTTGGGTCCGATCTTAGACTGGGAATGAACTCCGT
261 GTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
** * * **
12579 ATGCCTAAGCCAACCGATAAAACGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCAAGATG
326 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATG
* *
12644 CGCAAGCCGTTGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCCATGCCA
391 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
* * * * *
12709 ATGCCATTTGTATGGCTTGCAAATTCATACAATGGACCCTTAAGCCTTCATGTGACGTTTCAAGG
456 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * *
12774 CAAGACGACCCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATCTTTTTGAA
521 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGAT-TTTTTTAA
* *
12839 AAGTTTTTT-AGATGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGT-TTTTTAGTTGGC
585 AA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-GTTGGC
* * * *
12902 ATGCACAAAAAAATTTAGCTAAGAACTCGAAGTGAACAGGATTTTGTGACCATTTGAAAAAAATG
648 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
12967 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * * * *
13032 GGGGTGTGAGTTCTCAAGGTTTAATGGGGGATA-GGGGCCAATATAAGGGCCAAGCAGCAGCACC
778 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * *
13096 CAACACACATCATGTGCGCACACCCTTTCCCCCGCCCCCCAATCGCCGG-ACCCCAATG
843 CATCGCACATCATGTGCGCACA-CC---CCCCCGCCCCCCAATCGTCGGAACCCCAATG
* * * * ***
13154 CCGTCGGTCAGGTTCT-TCGACGATGCTCTGGCGATGGTGCCCCGGGCAAAAAAAAAATGTAACA
1 CCGTCGGTCAGGTTCTCT-GGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCA
* *
13218 CCAGCACATGCCTGAGCCCAGCATGTGCACCTGTAACCCTCGGTCCGGT-TCGATCTTACACTGG
65 CCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCT-GATCTTACACTGG
* *
13282 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTATG-AACGAG
129 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * *
13346 CGTGCAGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATTGGCCGGGTCCCCCCC
194 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCCC
* **** * * * *** * * *
13411 TTCGTGCTAAAAATCCTGTTGTCGCAACCCTCGAAGCGGTTCAATCTTAGACTGGGAATGAAATC
258 TGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
* * * *
13476 CGTATGCCTAAGCCAATCAACTAAACGAGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
323 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
* * * ** * * *
13541 ATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTAAATATTTTTGCCGTA
388 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
* * * ** *
13606 CCAATGCAATTTTTCTGGCTAGTAAATTCATACAATTTTCCCTTATGCCTTCATGTGAAGTTTCA
453 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * * * * *
13671 AGGCAAGACAAATCGTTTTCCATTTTTAACGATTTTTCAAACTTTTTACGGTTCGAGATTTTTTT
518 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTT
*
13736 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGTTGGC
583 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* ** * *
13801 ATGCAC-------TAC-GCT---GGC-CAGAAGTGTACAGGATTTTGTGACCATTAGAAAAAGGT
648 ATGCACAAAAAAATTCAGCTAAAAACTC-GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGT
* * *
13854 ATCCCCGTTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
712 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
** *
13919 GGGGGTGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCAC
777 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * *
13984 CAATCGCACATCATGTGCGCACA-CCCCCCGCCCCCCCAATCGCCGGAACCCTAATG
842 CCATCGCACATCATGTGCGCACACCCCCCCG-CCCCCCAATCGTCGGAACCCCAATG
* * * ** *** *
14040 CCATCGATCAGGTTCTCCGAATGATGCTCTAACGATGGTG-CTCCGGGCG-AAAAAAAATGCTGC
1 CCGTCGGTCAGGTTCTCTG-GCGATGCTCCGGCGATGGTGCCT-CGGGCGAAAAAAAAATGCGGC
* * *
14103 ACCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTTGGTCCGGTATGATGTTACACTGG
64 ACCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGG
* * * **
14168 AAATGAACTCCGTATGCTTAGACTGAGAATGAACTCCATATGCCTAAGTCAACCCACGAAATTAG
129 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * *
14233 CGTTCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGTAAGCCGAGGATAGGTCGGGTCCCCCTC
194 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCC-C
* * * ** ** * * *
14298 TACATGCTGCCGATCCTGTTGCTGCAACCCTCACTCCGATCTGATCTTAGACTGGGAATCAACTC
258 TGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
* * * * * *
14363 TGTTTGCCTAAGCCAACCGAAGAAATGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGAGGG
323 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
* * * *
14428 ATGCGCAAGCCTTGGATCGATAGGGTAGTAGGCGGGTTTAGGCACATCTTCATATTTCTACCATG
388 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
14493 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
453 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
*
14558 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTT
518 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTT
* * * *
14623 AAAATTTTTTCAGAAGGATTTTTGGCCCAAAACTTGGTAGACGTGATCTTTGTATTTTTTTTGGC
583 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* * * *
14688 ACGCACAAAAATATTCAGCCAAAAACTCGAAGTGTACAGCATTTTGTGACCATTTGAAAAAAGTG
648 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
* *
14753 TCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAA
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * *
14818 GGGGTGTGAGTTCTTGAGCTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACC
778 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* ** *
14883 CA-CGCACATCATGTGCGCACACCCCCCCGGCCCTTAATCGTTGGAACCCCAATG
843 CATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* * * * * * *** *
14937 CCGCCGGTCAGGTTCTCTAGCAATACTCCGGTGATGGTGCATCGAAAGAAAAAAAAATGCAGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * * ** * * *
15002 CTGCACATGCTCGAGCCCAGCATGTGTACCCACAACCTTCGGTCCGGTCTAATCTTCCACTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
** * *
15067 ATGAACTTGGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCG
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * ** *
15132 TGCGGGCGCTCAGCCAGCCAAAGGGGCAAGATGCGCAAGCTGGGGATCGGTCAAGTCCCTCCTGC
196 TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTGC
* * * * * * * *
15197 ATGCTTCCAATCCTACTGCCACAACCCTCAGTCCGGTCCAATATTAAACTGGGAATGAACTCCGT
261 GTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * ** * * * *
15262 ATGCCTAAGCCAACCAACGAAACGAGCAGGTAGGAGAGCACTACG-CTGACCAGAGAGACGGGAT
326 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTC-GGCCAGAGAGGCGGGAT
* *
15326 GCGTAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTCTGCCATGC
390 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCTGCCATGC
* * *
15391 TAATGCCATTTTTATGGCTTTTAAATTCATACAATGGCCCCTTAAGCCTTCATGTGAAGTTTCAT
454 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * * *
15456 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTCAAACTTTTTACGGTTTGAGATTTTTTAA
519 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTTA
* *
15521 AAATTTTTTCAGAAGGAGTTTTGGCCCCTCAA-TTGGTAGACATGATCCTTGTATTTTTGTTGGC
584 AAATTTTTTCAGAAGGAGTTTTGGCCCC-AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* *
15585 ATCCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
648 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
** * *
15650 TCCATATTTTAGGCACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * *
15715 GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGAGGACCAATATAAGGTG-CAAGTACCAGCAC
778 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG-GCCAAGTACCAGCAC
*
15779 CCATCGCACATCATGTGCGCACA--------CCCCCCAATCGCCGGAACCCCAATG
842 CCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
*** * * * *
15827 CCGTCGGTCAGGTTCTCCAACGATGCTTCAGTGATGGTGCCTCGGGCG-AGAAAAAATGCGGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * * *
15891 CAGCACATGCCC-AACCCTAGTATGTGCACCTGTAACCCTCGGTCCGGTCCGATCTTACACTGGG
66 CAGCACATGCCCGAGCCC-AGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGG
* * *
15955 AATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAATCCACGAAACAAGC
130 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
** * * ** * * *
16020 GTAAGGGCGCTCAGCCGACCAGA-GGGTAGGATATGCAAGTCGGGGATCGGTCGGGTCCCCTCTT
195 GTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTG
* * * *** * * *
16084 CATGCTGCCGATACTACTGTTGCAA-CCTTGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCG
260 CGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCG
* * * *
16148 CATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAATACG-CTGGCTAGAGAGGTGGGA
325 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTC-GGCCAGAGAGGCGGGA
* * * *
16212 TGCGCAAGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCCTCATTTTTCTACCATGC
389 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
*
16277 CAATGCCATTTTTATGGCTTGTAAATTCATACATTGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
454 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
** * * *
16342 GGCAAGACGACTCACTTTCTATTTTTAATGATTTTTGAAACTTTTTACAGTTCA-AGATTTTTTT
519 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-AGAGATTTTTTT
* * *
16406 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTTGTAGACATGATCCTTATATTTTTGTTGGC
583 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* * * * *
16471 ---C-C--CACACTT--GGTAAATA-T-GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
648 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
* * * * *
16526 TCCCCATTTTAGACACTTTAATGGCTACTGGCCGCAAACCTGTAAAATCACAAATGCTTTTTAAC
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* *
16591 GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGAACC
778 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * *
16656 CATCGCATATCATATGCGCACACCCCCCCGCTCCCCAATCATCGAAACCCCAATG
843 CATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* ** *** **
16711 CCGTCGGTCAAGTTCTCTGATGATGCTCCAATGATGGTGCCTCGAACG-AAAAAAAAT--GGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
** * ** * *
16773 CAGCACATGCCCGAGCCCAGTTTGTGCACTCGTAACCCTCAATCTGGTCTGATCTTACAGTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
*
16838 ATGAACTCCGTATGCTGAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * ** *
16903 TGCGGGCGCTCAGCCTGCCAGAGGGGTAGGATGCATAAGCCGGGGATCGATCGGGTCCCCCCCTG
196 TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCCCTG
* * ** * * * * * *
16968 CGTGCTGCCAATCTTGCTATCATGAA-TCTTGGACAGGTCTGATCTTAGACTGGGAATGAACTCC
260 CGTGCTGCCGATCCTGCTGCCA-CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
* * * * * *
17032 GTATGACTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCACTACGTCGACCAAAGAGCCAGGA
324 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* ** * *
17097 TGCGCAAGTCGTGGATCGATAGGGTGGTAGGCAGGTTTAGGCACATCTTCATATTTCTACTATGC
389 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
* *
17162 CAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTACATGTGAAGTTTCAT
454 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * * *
17227 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTTG
519 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTT-
* * * * *
17292 AAAATTTTTTCAGAAGGAGTTTTGGCACCAAAATTGGTTGACGTGATCCTTGTATTTTAGCTGGC
583 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* * *
17357 ATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTATAAGATTTTGTGACCATTTGAAAAACA-T
648 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAA-AGT
* *
17421 GTCCCCATGTCAGACACTTCAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
712 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
17486 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTACCAGCAC
777 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* *
17551 CCATCGCACATCATGTGCGCACA-CCCCCTGCCCCCCCAATCATCGGAACCCCAATG
842 CCATCGCACATCATGTGCGCACACCCCCCCG-CCCCCCAATCGTCGGAACCCCAATG
* * * * * * *
17607 TCGCCGGTCAGGTTCTAC-GACGATGCTCCCGCGATGGTGCATCGGGTGAAAAAAAAATGTGGCA
1 CCGTCGGTCAGGTTCT-CTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCA
* * * * * *
17671 CCAGCACATGCTCGAGCCCAGCATGTGCACCCGTAACCCTCGATTCGGTCCGATCTCATACTGGG
65 CCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGG
* * * * *
17736 AATGAACTCCATGTGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTTAAACCACGAAACGAGC
130 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * *
17801 GTGCGGGCGCTTAGCCTGCCAGAGGGGCAGGATGCGCAAGCCGGGGATTGGCCGGGTCCCCCTTG
195 GTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTG
** * * * * *
17866 CGTGCTATCAATCTTGCTACCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCG
260 CGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCG
* * * *
17931 TATGCCTAAGCCAATCGACGAAACGAGCGGGCAGGCGAGCACTACGTCGGCCAGAGAGGCGAGAT
325 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* * * *
17996 GTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAGATCTTCATATTTCTACCGTGCC
390 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
*
18061 AGTGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
455 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * * * *
18126 GCAAGACGACTTGTTTTCTATTTTTCACAATTTTTGAAACATTTTAAGGTTCAG-GATTTTTTAA
520 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-AGAGATTTTTTTA
** **
18190 AAAAATTTTC---AGGAGTTTTGGCCTAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
584 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
18252 TGCACAAAAAAATTCAGCTAAAATCTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGT
649 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGT
* * * *
18317 CCCCATTTCAAAAACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGC-CTTTTAAG
714 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAG
* *
18381 GGGGTGTGAGTTCTC-AAGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACC
778 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* *
18445 CATCCCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCAGAACCCCAATG
843 CATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* * * * * **
18500 CCGCCGGTAAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCAAGC---AAAAAAATGCGGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * * * ** * *
18562 CAGCACTTGCTCAAGCCCAGGATGTGCACCCACAACCCTCGGTCCAGTCTGACCTTACACTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* ** * *
18627 ATGAACTCCATATGCTTAGAC-CAGAATGAACTCCGTATGCCTAAGTCAACCCACGGAATGAGCG
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* *
18691 TGC-GGCGGTCAGCCGGCC--A---G-AGG--G-G--A-------A-CGGTCGGGTCCCCCCTAC
196 TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTGC
* ** * * ** * * *
18736 ATGCCACCGATCTTGCTACCACAACCCTCAATTCGGTCTGATCTTGGACTGGGAATGAACTCCGT
261 GTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
** * * * *
18801 ATGCCTAAGCCAATGGACGAAACGAGCGGGCGTGCGGGCACCACGCCAGCCAGAGAGGCGGGATG
326 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATG
* * *
18866 CGCAAGCCGTGGATCGATAGGGTGGTATGTGGGTTTAGGCACATCCTCATATCTCTGCCATGCCA
391 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
* * *
18931 ATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATAG
456 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * *
18996 CAAGATGACTCGTTTTCTATTTTACACGATTTTTGAAACTTTTTACGGTTCA-AGATTTTTTAAA
521 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-AGAGATTTTTTTAA
* * * * *
19060 AATTTTTTTAGAAGGATTTTTGGCCCTAAACATGGTAGACGTGATCCTTGTATTTCTGTTGGCAT
585 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
19125 GCATAAAAAAATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTATC
650 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTC
*
19190 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGG
715 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
19255 GGCGTGAGTTCTCAAGGTTTGATGAGGGTTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
780 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* *
19320 TCGCACATCATGTGCGCACACCCCCCCCGCCGCCCCAATCGCCGGAACTCCAATG
845 TCGCACATCATGTGCGCACA-CCCCCCCGCC-CCCCAATCGTCGGAACCCCAATG
* * * ** * *
19375 CTGTCGGTCAGGTTCTCCGGCAATGCTCCAACGATGGTGCCTCGGGCG-AAAAAAAATGTGTCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * * * * * *
19439 TAGCACATGCCCGAGCCTAGCATGTGCACCCGCAACCCTCGGTCTGATCCGATGTTACTA-TGGG
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTAC-ACTGGG
* * * *
19503 AATGAACTTCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACAAGC
130 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * ** *** *
19568 GTGCGGGCGCTCAGCCGTCCAGAGGGGCAGGATGCACTAGCTGGCAATCAACCGGGTCCCCCCTA
195 GTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTG
* * * * * * * *
19633 CGTGCTACTGATCTTGGTGCCACAA-CCTCGATTCGATTCGATCTTAGACT-GGAATGAACTCCG
260 CGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCG
* * ** * * * *
19696 TATGCCTAAGCAAACCAATAAAACAAGCAGGCGGGTGGGCACTACGTCGGCCAGAGCGGCGGGAT
325 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* * *
19761 GCACAAGCCGTAGATGGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
390 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* *
19826 AATGCAATTTTTATGGCTTGTAAATTCATAGAATGGTCCC---A----TCATGTGAAGTTTCATG
455 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * *
19884 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
520 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTT-TA
* * * * *
19949 AAATTTTTT-AGAAGGAGTTTTTGG-CCGAAGCATGGTGGATGTGATCCTTGTATTTTTGTTGGC
584 AAATTTTTTCAGAAGGAG-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* * * *
20012 AAGCACAAAAAAATTCAGCTAAAAACTCGTAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTG
648 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
* * *
20077 TCCCCATTTCAAACACTTTAATGCCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * *
20142 GGGCTATGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACC
778 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * *
20207 CATCACACATCATGTGCGCACACCCCCCCGCCACCCCAATCGTCAGAACGCCAATG
843 CATCGCACATCATGTGCGCACACCCCCCCGCC-CCCCAATCGTCGGAACCCCAATG
* * * *
20263 CCGTCGGTCAGGTTCTCCGGTGATGCTCCGGTGATGGTGCC-CGAGG-G--AAAAAAATACGGCA
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCG-GGCGAAAAAAAAATGCGGCA
* ** * *
20324 CCAGCACATGCTCGAGCCCAGCATGTGCACTAGTAACCCTCGGTCTGGTCTGATCTTAAACTGGG
65 CCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGG
* * *
20389 AATAAACTCCGTATGCTTAGACTGGGAATGAAATCAGTATGCCTAAGTCAACCCACGAAACGAGC
130 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * **
20454 GAGCGGACGCTCAGCCGGCCAGAGTGGTAGGATGCCCAAGCCGGGGATCGAACGGGTCCCCCTCT
195 GTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCC-CT
* * * * ** **
20519 ACATGCTGCCAATCCTACTGCTGCAACCCTCACTCCGGTCCGATCTTAGACTGGGAATGAACTCC
259 GCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
*
20584 GTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
324 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* **
20649 TGCGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCACAC
389 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
* * * *
20714 CAATGCCATTTTTATGGCTTGTAAATCCATACAACGGTCCCTTAAGCCCTAATGTGAAGTTTCAT
454 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * *
20779 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCTG-GATTTTTTT
519 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-AGAGATTTTTTT
* * * * * * *
20843 AAAATTTTTTTAGAAGCAGTTTTGGCCCCAACCTTGGTAGACGTGATCGTTGTGTCTTTGTTGGG
583 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* *
20908 ATGCAAAAAAAAAATTCAGCTAAAAGCTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGT
648 ATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGT
* ** *
20973 GTCCACATTTCAGACACTTTAATCACTACTGGCAGCAAACGTGTAAAATCTCAAATGCTCTTTAA
712 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
21038 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCA-
777 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
*
21102 -CATCGTACAT-ATGTGCGCACA---CCCCGCCCCTCCAATCGTCGGAACCCCAAATG
842 CCATCGCACATCATGTGCGCACACCCCCCCGCCCC-CCAATCGTCGGAACCCC-AATG
* * * * * * * * ** *
21155 TCGCCGATCAGGTT-TCCCGGTGATGCTCCGACGACGGTGCCCCAAGCGAAAAAAAAATGCGACA
1 CCGTCGGTCAGGTTCT-CTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCA
* * ** * * * * * *
21219 CTAGCACATGCCCGAGGCCAGCATGTGCACATGCAACCCTCAGTCCAGTATGATCCTACACTAGG
65 CCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGG
*
21284 AATGGAA-TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
130 AAT-GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * *
21348 CGTGCGGGAGCTCAGCTGGCCAGAGGGGCAGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCCT
194 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCC-
* * * * * * * * *
21413 TACATGCTGCCAATCCAGCTGCCACAACCCTTGGTCCGGTCTGATCTTAGGCTGGGAATGAGCTT
258 TGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
* * *
21478 CGTATGCCTAAGTCAACTGACGAAACGAGCGGGCGGGCGGGCACTACGCCGG-CAGAGAGGCGGG
323 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
* * *
21542 ATGCGCACGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATA
388 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
21607 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
453 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * * * **
21672 TGGGAAGACGACTCGTTTTCTATTTTTCGCGATCTTTAAAACTATTTATAGTTCAG-GATTTTTT
518 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-AGAGATTTTTT
* * *
21736 TAAAATTTTTACAGAAGGAGTTTTGAG-CCCAAACATGGTAGACGTGATCCTTGTATTTCTGTTG
582 TAAAATTTTTTCAGAAGGAGTTTTG-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
*
21800 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAAAG
646 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAG
21865 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
711 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
21930 AGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACGAGCA
776 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* *
21995 CCCATCACACATCATGTGCGCACA-CCCCCCGTCCCCCCAATCGTCGGAACCACAATG
841 CCCATCGCACATCATGTGCGCACACCCCCCCG-CCCCCCAATCGTCGGAACCCCAATG
* * ** ** * *
22052 CC-CCGGTCAGGTTCTCCGATGATGCTCCGATGATGGTGCCCCGGGC-AAAAAAAAATGTGGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * * * *
22115 CAGCACATGCCCGAGCCCAGCATGTGCACCCTTAACCCTTGGTCTGGTCCGATCCTACACTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* * *
22180 ATGAACTCCGTATGCTTAGACTGGGAATGAATTCCGTATGCCTAAGTCAACCAATGAAACGAGCG
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * *
22245 TGCGGGAGCTCAGCTGGCCAGACGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTTA
196 TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCC-TG
* * * * * * *
22310 CATGCTGCCAATCCAGCTGCCTCAACCCTCGGTCCGGTCCAATCTTAGGCGGGGAATGAACTCCG
260 CGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCG
* * * * * * *
22375 TATGCCTAAGCCAATCGACGAAACAAGCAGGCTGGCGGGCACTACGCCGGCCAGAGAGTCGTGAT
325 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* * *
22440 TCGCAAGCCGTGGATCGATAGGGTGGTGGGTGGGTTTAGGCACATCTTCATATTTATGCCATGCC
390 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
*
22505 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTCAGCCTTCATGTGAAGTTTCATG
455 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * * *
22570 GCAAGACAACTCGTTTTCTATTTTTCACGATTTTGGAAACTTTTTATGGTTCGAGATTTTTTTAA
520 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTTAA
*
22635 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCGTGTAATTTTT-TTGGCA
585 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-ATTTTTGTTGGCA
* * * * *
22699 TACACAAGAAAATTCAACTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAACAAAGTAT
649 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGT
*
22764 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGAAAAATCTCAAATGCTCTTTAAGG
714 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * * * *
22829 GGGTGTGAGCTCTTGAGGTTAGATGAGGGATAGAGGGCCAATATAAGGGCCACGTACCAGCACCC
779 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* *
22894 ATCGCACATCATGTGAGC-CAGCCCCCCGCCCCCCAAATCGTCGGAACCCCAATG
844 ATCGCACATCATGTGCGCACACCCCCCCGCCCCCC-AATCGTCGGAACCCCAATG
* * * *
22948 CCGTCGGTCAGGTTCTCCT-GCGATGCTCTGGCGATGGTTCCCCGGGC-AAAAAAGAAATGTGGC
1 CCGTCGGTCAGGTTCT-CTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAA-AAATGCGGC
* ** * * *
23011 ACCAGCACATGGCCGAGCCCAGCATGTGCACCCACAACCCTTGATCCGGT-TGGATCTTACATTG
64 ACCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCT-GATCTTACACTG
* * * **
23075 GTAATGAACTTCGTATGCTTAGATTGGGAATGAACTCTTTATGCCTAAGTCAACCCACGAAACGA
128 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * * *
23140 GAGTGCGGGCGCTCCA-CCGGCCAGAAGGGCAGGACGCACAAGTCGGAGATCAGTCGGGTCCCCC
193 GCGTGCGGGCGCT-CAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCC
* * * ** * * *
23204 CCTGCATGCTACCGATCCTGCTGTCGGAACCCTCTGTCAGGTTCGATCTTAGACTGGGAATGAAC
256 CCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * * ** * * *
23269 TCCGTCTGACTAAGCCAACCAACGAAACGAGCGGGTGGGTAGGCACTACATCGGCCAGAAAGGCC
321 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG
23334 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
386 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* *
23399 CGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAATTTT
451 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* *
23464 CATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTGAAAACTTTTTACGGTTCGAGATTTT
516 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG-AAACTTTTTACGGTTAGAGATTTT
* *
23528 TTTAAAATTTTTTTAGAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
580 TTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * * * *
23593 GGCATGCATAAAACAATTCAGCTAAAAACTCGATGTGCACAAGATTTTGTGACCATTTGAAAAAA
645 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAA
* * * *
23658 GTGTCCCCATTTCAGACACTTTAAGGGCTACTAGTAGCAAACCTATAAAATCTCAAATGCTCTTT
710 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
*
23723 AAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
775 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* *
23788 ACCCATCGCACATCATGTGCGCACAACCCCCCCCCCCCGCCGCCCCAATCGTCGGAACTCCAATA
840 ACCCATCGCACATCATGTGCGCAC-A-----CCCCCCCGCC-CCCCAATCGTCGGAACCCCAATG
* * * ** * *
23853 CTGTCGGTCAGGTTCTCCGGCAATGCTCCAACAATGGTGCCTCGGGCG-AAAAAAAATGTGGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* ** * * *
23917 CAGCACATGCCCAAGCCCAGCATGTGCACCCGTAACCCAAGATCCGATCTGATCTTAGACTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* * *
23982 ATGAACTCTGTACGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCG
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * ** **
24047 TGCAGGCGCTCAGCCGACAAGAGGGGCATCATGCTTAAGCCGGGGATCGGTCGGGT-CCCCCTGC
196 TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTGC
* * * * * * * * *
24111 GTGGTGCCGATCCTGCTGTCACAACCCTTGGTCTGGGCTGATCTTTGATTGGGAATGAACTCTGT
261 GTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * * **
24176 ATGCCTAAGGCAACCGACAAAACGAGCAGGCGGGCGAGCGGGCACTACGTCGGCTAGAGAGGTAG
326 ATGCCTAAGCCAACCGACGAAAC--G-A-GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGG
* *
24241 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAATTCTACCAT
387 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAT
* *
24306 GCCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGATGTTTC
452 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * *
24371 ATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCAG-GATTTTT
517 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-AGAGATTTTT
* * * * * *
24435 TTAAAATTTTTTCAAAAAGAGTTTTGGGCCGAAACCTGGTAGACGTGATCCTTGTAGTTTT-TTG
581 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
24499 GCATGCACAAAAACATTCAGCT-AAAACTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAAAG
646 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAG
24563 TGT-CCCATTTCAGGACACTTTAATGGCTACTGG-AGC-AACCTGTAAAATCTCAAATGCTCTTT
711 TGTCCCCATTTCA-GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
24625 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATATGGGCCAAGTACCAGC
775 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
24690 ACCCATCGCACATTATGTGCGTACAACCCCCCCGCCCCCTCAATCATCGGAACCCCAATG
840 ACCCATCGCACATCATGTGCGCAC-ACCCCCCCGCCCCC-CAATCGTCGGAACCCCAATG
** ** ** ** * * * * *
24750 CCACCGGTCAGGTTCTCTGGTAATGCTATGATGGTGGTGCCCCGGGTG-AAGAAAAATGTGGCAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * *
24814 CAGCACATGCCCGTGCCCAGCATGTGCACCTGTAACCCTCGGTCCGGTCCGATCTTACACTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* * * * * * * *
24879 ATGAAATCCGTATGCTTAGACTTGGTATTAACTCTGTATGCGC-AAGTCAACCCATGAAATGAGG
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC-CTAAGTCAACCCACGAAACGAGC
* * * * * ** * *
24943 GTACGGGCGCTCAGTCGGTCAGAGGGGCAGGATCCACAAGTTGAGGATCGGTCGGGTCCTTCCCT
195 GTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCC-CCCCT
* * * * ** * * * *
25008 GTGTGCTAG-CGATCCTACTACCGCAACCCTTAGTTCAGTCTGGTCTTAGACTGGGAATGAACTC
259 GCGTGCT-GCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
* * ** * *
25072 CATCTGCCTAAGCCAACCGGTGAAACGAGCGGGCGGGCGGGCACTACGTCGGTC-GAGAGGCGAG
323 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
** * * *
25136 ATGAACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTCGGCATATCTTCATATTTCTACCATG
388 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
*
25201 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTAA
453 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * *
25266 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGAGATTTTTTT
518 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTT
*
25331 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTGTTGG
583 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGG
* * * ** *
25396 CATGCACAAAATAATTCAGCTAAAAACTTGAAGTGTACAGGACTTTGTGACTGTTTGAAAAGAGT
647 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGT
* *
25461 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTATAA
712 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * *
25526 GGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCGAGTACCAGCAC
777 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * *
25591 CCATCACACATCATGTGCGTATA--CCCCCGCCCCCCAATCGTCGAAACCCCATTG
842 CCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* * * ** ** ** *
25645 TCGTCGGTCAGGTTCTCCGACGATGCTTTGGAAATGGTGCCTCGGGCG---AAAAAATGTTGTAC
1 CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
* * ** * ** *
25707 CAGCACATGCCAGAGCCCAACATGTGCACCCACAACCCTCAGTTTGGTCCGATCTTACACTGGGA
66 CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
*
25772 ATGAGCTCCGTATGCTTAGACTGGGAATGAACTCCCGTATGCCTAAGTCAACCCACGAAACGAGC
131 ATGAACTCCGTATGCTTAGACTGGGAATGAACT-CCGTATGCCTAAGTCAACCCACGAAACGAGC
** * * * * *
25837 GTGCGGGCGCTCAATCGACCAAAGGGGCAGGATGCGTAAGCCAGGGATC-ATCGGGTCCCCACCT
195 GTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC-CCT
* * * * * * * * *
25901 GTGTGTTGCCGCTCTTGGTGCCATAACACTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCT
259 GCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
* * * *
25966 GTATACCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGGTGGGA
324 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* * * *
26031 TGCGCAAGCCATGGATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTTTGTCATGC
389 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
26096 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
454 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
** *
26161 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCA-AGATTTTTTA
519 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-AGAGATTTTTTT
* * * *
26225 AAAATTCTTTCA-AAGGAGTTTTGGGCCCAAACCTGGTAGATGTGATCCTTGTAGTTTTT-TTGG
583 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGG
* * *
26288 CATGCACAAAAAAATTCAGCTAAAAACTC----TGTA-TGGCCATTTCGTGGCCATTTGAAAAAA
647 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGG--ATTTTGTGACCATTTGAAAAAA
* **
26348 GTGTCCCTATTTCAGACACTTTAATGGCTACTAACAGCAAACCTGT-AAATCTCAAATGCT-TAG
710 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT--
26411 TTAA-GGGGTGTGAGTT
773 TTAAGGGGGTGTGAGTT
26427 NNNNNNNNNN
Statistics
Matches: 12311, Mismatches: 1654, Indels: 429
0.86 0.11 0.03
Matches are distributed among these distances:
869 307 0.02
870 1 0.00
872 180 0.01
873 67 0.01
874 10 0.00
875 58 0.00
876 173 0.01
877 85 0.01
878 47 0.00
879 14 0.00
880 5 0.00
881 1 0.00
882 139 0.01
883 33 0.00
884 96 0.01
885 286 0.02
886 570 0.05
887 577 0.05
888 307 0.02
889 767 0.06
890 164 0.01
891 26 0.00
892 78 0.01
893 554 0.05
894 947 0.08
895 695 0.06
896 1225 0.10
897 1170 0.10
898 1247 0.10
899 474 0.04
900 458 0.04
901 497 0.04
902 279 0.02
903 185 0.02
904 232 0.02
905 91 0.01
906 261 0.02
907 5 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (897 bp):
CCGTCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGGGCGAAAAAAAAATGCGGCAC
CAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTCGGTCCGGTCTGATCTTACACTGGGA
ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
TGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTGC
GTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATG
CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTTAAA
ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCC
CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
Found at i:15980 original size:26 final size:26
Alignment explanation
Indices: 15944--15996 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15934 CCGGTCCGAT
15944 CTTACACTGGGAATGAACTCCATATG
1 CTTACACTGGGAATGAACTCCATATG
* *
15970 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCATATG
15996 C
1 C
15997 CTAAGTCAAT
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCATATG
Found at i:19078 original size:894 final size:885
Alignment explanation
Indices: 11353--26426 Score: 15698
Period size: 896 Copynumber: 16.9 Consensus size: 885
11343 GGGCCAAGTA
* * * * **
11353 CCGTTGGTCAGGTTCTCCGGTGATGCT-CTAGCGATGGTGCCCCGGGTGAAAGAAAAATGCAGCA
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGA-CGATGGTGCCCCGGG-CAAA-AAAAATGTGGCA
** * ** * * * *
11417 CCAGCACATGCCCGATACCAGCATGTGCGCCTGCAACCCTTGGTCCAGTCCGATCTTAAACTGGG
63 CCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGG
* * * * * * *
11482 AATGAACTTCGTATGCCTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAATGAAC
128 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * * *
11547 TTGCAGACGCTCGGCCGACCAGAGGGGTAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCTCTG
193 GTGC-GGCGCTCAGCCGGCCAG-GAGG--GGA-G--CAAG-C---G---GGTCGGGTCCCCCCTA
** *** * ** * *
11612 TGTGCTATTGATCCTGCTACCGTAACCCTCACTTCGGTCTGATCTTAGACTGGGAATGAACTCAG
244 CATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * *
11677 TATGCCTAAGCCAACCGACGAAATGAGTGGGCGGGCGGGCACTACGTCGGCCAAAGAGGCGAGAT
309 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* * *
11742 GCGTAAGCCGTGGATCGATAGGGTGGTAGGTGCGTTTTGGCACATCTTCATATTTCTGCCATGCC
374 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
*
11807 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGTAGTTTCATG
439 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* ** *
11872 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGCTCAAGATTTTTTTAA
504 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGA-TTTTTTAA
* * * *
11937 AA-TTTTTT-CAG------AAAGAGTTTTGGCCCCAAAC-TCGTAGACATGATCCTTATATTTTT
567 AATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * * *
11993 GTTGGCAGGCA-AAAAAAATTTTAGCTAAAAACTCGAAGTGTATACGATTTTGTGACCATTTGAA
631 GTTGGCATGCACAAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAA
* * **
12057 AAAAGTGTCCCCATTTTAGACACGTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCGATGCT
695 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
12122 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGC
760 CTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * * * *
12187 CGGCACCCATCACACGTCATGTACACACACCCTCTCCCCCGCCCCCGCAATCGTCGAAACCCCAA
824 CAGCACCCATCGCACATCATGTGCGCACA--C-C-CCCCCGCCCCC-CAATCGTCGGAACCCCAA
12252 TG
884 TG
* * * ** * ***
12254 TCGTCGGTCAGGTTCTCTGGCGATGCTCTGGTGATGGTGCCCCGAGCAAAAAAAAAATGCAACAC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGC--AAAAAAAATGTGGCAC
* * * *** * *
12319 CAGCACATGCTCAAGCCTAGCATGTGCACCTGTAACCCTCGATCCGGTCTGATCTTACACTGTGA
64 CAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* *
12384 ATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTACGAAACGAGCG
129 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA--G
* *
12449 CGTG-GGTGCTCAGCCGGCCAGAAGGGCAGGATGCGCAAGCCAGGGATCGATCGAGTCCCCCCTA
192 CGTGCGGCGCTCAGCCGGCCAGGA-GG--GGA---GCAAG-C-GGG-TCG---G-GTCCCCCCTA
* * * *** * ** * *
12513 CGTGTTGTCGATCCTGCTGCTGTATCCCTTGGTTGGGTCCGATCTTAGACTGGGAATGAACTCCG
244 CATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCG
** * * **
12578 TATGCCTAAGCCAACCGATAAAACGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCAAGAT
309 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* *
12643 GCGCAAGCCGTTGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCCATGCC
374 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* * * * *
12708 AATGCCATTTGTATGGCTTGCAAATTCATACAATGGACCCTTAAGCCTTCATGTGACGTTTCAAG
439 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
*
12773 GCAAGACGACCCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATCTTTTTGA
504 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGAT-TTTTT-A
* * *
12838 AAAGTTTTTT--AGA----T--GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGT-TTTT
566 AAATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
12894 TAGTTGGCATGCACAAAAAAATTTAGCTAAGAACTCGAAGTGAACAGGATTTTGTGACCATTTGA
630 T-GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGA
*
12959 AAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
694 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
13024 TCTTTAAGGGGGTGTGAGTTCTCAAGGTTTAATGGGGGATA-GGGGCCAATATAAGGGCCAAGCA
759 TCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * *
13088 GCAGCACCCAACACACATCATGTGCGCACACCCTTTCCCCCGCCCCCCAATCGCCGG-ACCCCAA
823 CCAGCACCCATCGCACATCATGTGCGCACA-CC---CCCCCGCCCCCCAATCGTCGGAACCCCAA
13152 TG
884 TG
* * * * **
13154 CCGTCGGTCAGGTTCTTCGACGATGCTCTGGCGATGGTGCCCCGGGCAAAAAAAAAATGTAACAC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGC--AAAAAAAATGTGGCAC
* ***
13219 CAGCACATGCCTGAGCCCAGCATGTGCACCTGTAACCCTCGGTCCGGT-TCGATCTTACACTGGG
64 CAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCT-GATCTTACACTGGG
* *
13283 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTATG-AACGAGC
128 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
*
13347 GTGCAGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATTGGCCGGGTCCCCCCCT
193 GTGC-GGCGCTCAGCCGGCCAG-GAGG--GGA---GCAAG-C-GGG--T---CGGGT-CCCCCCT
* * **** * * * * *
13412 TCGTGCTAAAAATCCTGTTGTCGCAACCCTCGAAG--CGGT-TCAATCTTAGACTGGGAATGAAA
243 ACATGCTGCCGATCCTGCTGCCACAACCCTC--AGTTCGGTCT-GATCTTAGACTGGGAATGAAC
* * * *
13474 TCCGTATGCCTAAGCCAATCAACTAAACGAGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGGCG
305 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG
* * * ** * *
13539 GGATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTAAATATTTTTGCCG
370 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* * * * ** *
13604 TACCAATGCAATTTTTCTGGCTAGTAAATTCATACAATTTTCCCTTATGCCTTCATGTGAAGTTT
435 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * * * * *
13669 CAAGGCAAGACAAATCGTTTTCCATTTTTAACGATTTTTCAAACTTTTTACGGTTCGAGATTTTT
500 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGA-TTTT
* * *
13734 TTAAAA-TTTTTT-CAG------AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTAT
563 TTAAAATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTAT
* **
13791 TTTTGTTGGCATGCAC-------TAC-GCT---GGC-CAGAAGTGTACAGGATTTTGTGACCATT
627 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC-GAAGTGTACAGGATTTTGTGACCATT
* * * * *
13844 AGAAAAAGGTATCCCCGTTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAA
691 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
*
13909 TGCTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
756 TGCTCTTTAAGGGGGTGTGAGTTC-TCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * * *
13974 GCACCAGCACCAATCGCACATCATGTGCGCACA-CCCCCCGCCCCCCCAATCGCCGGAACCCTAA
820 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-CCCCCCAATCGTCGGAACCCCAA
14038 TG
884 TG
* * ** ** *
14040 CCATCGATCAGGTTCTCCGAATGATGCTCTAACGATGGTGCTCCGGGCGAAAAAAAATGCT-GCA
1 CCGTCGGTCAGGTTCTCCG-GCGATGCTCCGACGATGGTGCCCCGGGC-AAAAAAAATG-TGGCA
** * * * *
14104 CCAGCACATGCCCGAGCCCAGCATGTGCACCCGTAACCCTTGGTCCGGTATGATGTTACACTGGA
63 CCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGG
* * **
14169 AATGAACTCCGTATGCTTAGACTGAGAATGAACTCCATATGCCTAAGTCAACCCACGAAATTAGC
128 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* *
14234 GTTCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGTAAGCCGAGGATAGGTCGGGTCCCCCTCT
193 GTGC-GGCGCTCAGCCGGCCAG-GAGG--GGA-GC--AAG-C---G---GGTCGGGTCCCCC-CT
* ** * * * * *
14299 ACATGCTGCCGATCCTGTTGCTGCAACCCTCACTCCGATCTGATCTTAGACTGGGAATCAACTCT
243 ACATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCC
* * * * *
14364 GTTTGCCTAAGCCAACCGAAGAAATGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGAGGGA
308 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* * * *
14429 TGCGCAAGCCTTGGATCGATAGGGTAGTAGGCGGGTTTAGGCACATCTTCATATTTCTACCATGC
373 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
14494 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
438 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* *
14559 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTAGAGATTTTTTTA
503 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-CAGA-TTTTTTA
* * * *
14624 AAA-TTTTTT-CAG------AAGGATTTTTGGCCCAAAACTTGGTAGACGTGATCTTTGTATTTT
566 AAATTTTTTTAAAGATTTTTAAAGAGTTTTGGCCC-AAACTTGGTAGACGTGATCCTTGTATTTT
* * * * *
14681 TTTTGGCACGCACAAAAATATTCAGCCAAAAACTCGAAGTGTACAGCATTTTGTGACCATTTGAA
630 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAA
*
14746 AAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
695 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * * *
14811 CTTTAAAGGGGTGTGAGTTCTTGAGCTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTAC
760 CTTTAAGGGGGTGTGAGTTC-TCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* ** *
14876 CAGCACCCA-CGCACATCATGTGCGCACACCCCCCCGGCCCTTAATCGTTGGAACCCCAATG
824 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* ** * * ** ** * * **
14937 CCGCCGGTCAGGTTCTCTAGCAATACTCCGGTGATGGTGCATCGAAAGAAAAAAAAATGCAGCAC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCG--GGCAAAAAAAATGTGGCAC
* * * * * *
15002 CTGCACATGCTCGAGCCCAGCATGTGTACCCACAACCTTCGGTCCGGTCTAATCTTCCACTGGGA
64 CAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGA
** * *
15067 ATGAACTTGGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCG
129 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * *
15132 TGCGGGCGCTCAGCCAGCCAAAGG-GGCAAGATGCGCAAGCTGGGGATCGGTCAAGTCCCTCCTG
194 TGC-GGCGCTCAGCCGGCC--AGGAGG---G--GAGCAAGC--GGG-TCGG----GTCCCCCCTA
* * * * ** * *
15196 CATGCTTCCAATCCTACTGCCACAACCCTCAGTCCGGTCCAATATTAAACTGGGAATGAACTCCG
244 CATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * ** * * * *
15261 TATGCCTAAGCCAACCAACGAAACGAGCAGGTAGGAGAGCACTACG-CTGACCAGAGAGACGGGA
309 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTC-GGCCAGAGAGGCGGGA
* *
15325 TGCGTAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTCTGCCATG
373 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCTGCCATG
* * *
15390 CTAATGCCATTTTTATGGCTTTTAAATTCATACAATGGCCCCTTAAGCCTTCATGTGAAGTTTCA
437 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * *
15455 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTCAAACTTTTTACGGTTTGAGATTTTTTA
502 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCAGATTTTTTA
* * * * *
15520 AAAATTTTTT-CAG------AAGGAGTTTTGGCCCCTCAA-TTGGTAGACATGATCCTTGTATTT
566 AAATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCC-AAACTTGGTAGACGTGATCCTTGTATTT
* *
15577 TTGTTGGCATCCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGA
629 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGA
** * *
15642 AAAAAGTGTCCATATTTTAGGCACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
694 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
15707 TCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGAGGACCAATATAAGGTG-CAAGT
759 TCTTTAAGGGGGTGTGAGTTC-TCAGGTTTGATGAGGGATAGGGGGCCAATATAAGG-GCCAAGT
*
15771 ACCAGCACCCATCGCACATCATGTGCGCACA--------CCCCCCAATCGCCGGAACCCCAATG
822 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
** * * * * *
15827 CCGTCGGTCAGGTTCTCCAACGATGCTTC-AGTGATGGTGCCTCGGGCGAGAAAAAATGCGGCAC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGA-CGATGGTGCCCCGGGC-AAAAAAAATGTGGCAC
* * *** *
15891 CAGCACATGCCC-AACCCTAGTATGTGCACCTGTAACCCTCGGTCCGGTCCGATCTTACACTGGG
64 CAGCACATGCCCGAGCCC-AGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGG
* * *
15955 AATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAATCCACGAAACAAGC
128 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* *
16020 GTAAG-GGCGCTCAGCCGACCA-GAGGGTAGGATATGCAAGTCGGGGATCGGTCGGGTCCCCTCT
193 GT--GCGGCGCTCAGCCGGCCAGGA-GG--GG--A-GCAAG-C---G---GGTCGGGTCCCCCCT
* * * *** ** * *
16083 TCATGCTGCCGATACTACTGTTGCAA-CCTTGGTCCAGTCTGATCTTAGACTGGGAATGAACTCC
243 ACATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCC
* * * *
16147 GCATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAATACG-CTGGCTAGAGAGGTGGG
308 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTC-GGCCAGAGAGGCGGG
* * * *
16211 ATGCGCAAGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCCTCATTTTTCTACCATG
372 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
*
16276 CCAATGCCATTTTTATGGCTTGTAAATTCATACATTGGTCCCTTAAGCCTTCATGTGAAGTTTCA
437 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
** * * *
16341 TGGCAAGACGACTCACTTTCTATTTTTAATGATTTTTGAAACTTTTTACAGTTCAAGATTTTTTT
502 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGA-TTTTTT
* * * * *
16406 AAAA-TTTTTT-CAG------AAGGAGTTTTGGCCCCAAACTTTGTAGACATGATCCTTATATTT
565 AAAATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * * *
16463 TTGTTGGC---C-C--CACACTT--GGTAAATA-T-GAAGTGTACAGGATTTTGTGACCATTTGA
629 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGA
* * *
16518 AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCCGCAAACCTGTAAAATCACAAATGC
694 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
16583 TTTTTAACGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
759 TCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
16648 CCAGAACCCATCGCATATCATATGCGCACACCCCCCCGCTCCCCAATCATCGAAACCCCAATG
823 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* * ** * * * **
16711 CCGTCGGTCAAGTTCTCTGATGATGCTCCAATGATGGTGCCTCGAACGAAAAAAAA--TGGCACC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGC-AAAAAAAATGTGGCACC
** * ** ** * *
16774 AGCACATGCCCGAGCCCAGTTTGTGCACTCGTAACCCTCAATCTGGTCTGATCTTACAGTGGGAA
65 AGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAA
*
16839 TGAACTCCGTATGCTGAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * *
16904 GCGGGCGCTCAGCCTGCCAGAGGGGTAGGATGCATAAGCCGGGGATCGATCGGGTCCCCCCCTGC
195 GC-GGCGCTCAGCCGGCCAG-GAGG--GGA-GC--AAG-C--GG---G-TCGGGT-CCCCCCTAC
* * * ** * * * **
16969 GTGCTGCCAATCTTGCTATCATGAA-TCT-TGGACAGGTCTGATCTTAGACTGGGAATGAACTCC
245 ATGCTGCCGATCCTGCTGCCA-CAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCC
* * * * * *
17032 GTATGACTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCACTACGTCGACCAAAGAGCCAGGA
308 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* ** * *
17097 TGCGCAAGTCGTGGATCGATAGGGTGGTAGGCAGGTTTAGGCACATCTTCATATTTCTACTATGC
373 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
* *
17162 CAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTACATGTGAAGTTTCAT
438 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * **
17227 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTTG
503 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCAGA-TTTTTT-
* * * *
17292 AAAA-TTTTTT-CAG------AAGGAGTTTTGGCACCAAAATTGGTTGACGTGATCCTTGTATTT
565 AAAATTTTTTTAAAGATTTTTAAAGAGTTTTGGC-CCAAACTTGGTAGACGTGATCCTTGTATTT
* * * * *
17349 TAGCTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTATAAGATTTTGTGACCATTTGA
629 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGA
* *
17414 AAAACA-TGTCCCCATGTCAGACACTTCAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
694 AAAA-AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
17478 CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGT
758 CTCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
17543 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGCCCCCCCAATCATCGGAACCCCAATG
822 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-CCCCCCAATCGTCGGAACCCCAATG
* * * * * * *
17607 TCGCCGGTCAGGTTCTACGACGATGCTCCCG-CGATGGTGCATCGGGTGAAAAAAAAATGTGGCA
1 CCGTCGGTCAGGTTCTCCGGCGATGCT-CCGACGATGGTGC-CCCGG-GCAAAAAAAATGTGGCA
* ** * * * * *
17671 CCAGCACATGCTCGAGCCCAGCATGTGCACCCGTAACCCTCGATTCGGTCCGATCTCATACTGGG
63 CCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGG
* * * * *
17736 AATGAACTCCATGTGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTTAAACCACGAAACGAGC
128 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * *
17801 GTGCGGGCGCTTAGCCTGCCAGAGGGGCAGGATGCGCAAGCCGGGGATTGGCCGGGTCCCCCTTG
193 GTGC-GGCGCTCAGCCGGCCAG-GAGG--GGA---GCAAG-C-GGG--T---CGGGTCCCCCCTA
* ** * * * * **
17866 CGTGCTATCAATCTTGCTACCACAACCCTC-GGTCTGGTCCAATCTTAGACTGGGAATGAACTCC
244 CATGCTGCCGATCCTGCTGCCACAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCC
* * * *
17930 GTATGCCTAAGCCAATCGACGAAACGAGCGGGCAGGCGAGCACTACGTCGGCCAGAGAGGCGAGA
308 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* * * *
17995 TGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAGATCTTCATATTTCTACCGTGC
373 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
*
18060 CAGTGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
438 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * * *
18125 GGCAAGACGACTTGTTTTCTATTTTTCACAATTTTTGAAACATTTTAAGGTTCAGGATTTTTT-A
503 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCA-GATTTTTTAA
* * *
18189 AA-------AAA-A-TTTTCAGGAGTTTTGGCCTAAAACTTGGTAGACGTGATCCTTGTATTTTT
567 AATTTTTTTAAAGATTTTTAAAGAGTTTTGGCC-CAAACTTGGTAGACGTGATCCTTGTATTTTT
*
18245 GTTGGCATGCACAAAAAAATTCAGCTAAAATCTCGAAGTGTACAGGATTTTGTGACCATTTGAAA
631 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAA
* * * *
18310 AAAGTGTCCCCATTTCAAAAACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGC-C
696 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
18374 TTTTAAGGGGGTGTGAGTTCTCAAGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACC
761 -TTTAAGGGGGTGTGAGTTCTCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
18439 AGCACCCATCCCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCAGAACCCCAATG
825 AGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* * * * ** *
18500 CCGCCGGTAAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCAAGC-AAAAAAATGCGGCACCA
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGCAAAAAAAATGTGGCACCA
* * * * * *
18564 GCACTTGCTCAAGCCCAGGATGTGCACCCACAACCCTCGGTCCAGTCTGACCTTACACTGGGAAT
66 GCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAAT
* ** * *
18629 GAACTCCATATGCTTAGAC-CAGAATGAACTCCGTATGCCTAAGTCAACCCACGGAATGAGCGTG
131 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* ** *
18693 CGGCGGTCAGCCGGCCA-GA-GGG-G-AA-C-GGTCGGGTCCCCCCTACATGCCACCGATCTTGC
196 CGGCGCTCAGCCGGCCAGGAGGGGAGCAAGCGGGTCGGGTCCCCCCTACATGCTGCCGATCCTGC
* * * **
18752 TACCACAACCCTCAATTCGGTCTGATCTTGGACTGGGAATGAACTCCGTATGCCTAAGCCAATGG
261 TGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * *
18817 ACGAAACGAGCGGGCGTGCGGGCACCACGCCAGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
326 ACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* * * *
18882 ATAGGGTGGTATGTGGGTTTAGGCACATCCTCATATCTCTGCCATGCCAATGCTATTTTTATGGC
391 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGC
* * *
18947 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATAGCAAGATGACTCGTTTT
456 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
*
19012 CTATTTTACACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAAATTTTTTT--AG----
521 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGATTTTTT-AAAATTTTTTTAAAGATTT
* * * * *
19071 --AAGGATTTTTGGCCCTAAACATGGTAGACGTGATCCTTGTATTTCTGTTGGCATGCATAAAAA
584 TTAAAGAGTTTTGGCCC-AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
19134 AATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCA
648 AATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
19199 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGCGTGAGT
713 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
19264 TCTCAAGGTTTGATGAGGGTTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
778 TCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *
19329 ATGTGCGCACACCCCCCCCGCCGCCCCAATCGCCGGAACTCCAATG
842 ATGTGCGCACA-CCCCCCCGCC-CCCCAATCGTCGGAACCCCAATG
* * * * * *
19375 CTGTCGGTCAGGTTCTCCGGCAATGCTCCAACGATGGTGCCTCGGGCGAAAAAAAATGTGTCACT
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGC-AAAAAAAATGTGGCACC
* * * * * *
19440 AGCACATGCCCGAGCCTAGCATGTGCACCCGCAACCCTCGGTCTGATCCGATGTTACTA-TGGGA
65 AGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTAC-ACTGGGA
* * * *
19504 ATGAACTTCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACAAGCG
129 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * *
19569 TGCGGGCGCTCAGCCGTCCAGAGGGGCAGGATGCACTAGCTGGCAATCAACCGGGTCCCCCCTAC
194 TGC-GGCGCTCAGCCGGCCAG-GAGG--GGA-GCA--AGC-GG--GT----CGGGTCCCCCCTAC
* * * * * *
19634 GTGCTACTGATCTTGGTGCCACAA-CCTC-GATTCGAT-TCGATCTTAGACT-GGAATGAACTCC
245 ATGCTGCCGATCCTGCTGCCACAACCCTCAG-TTCGGTCT-GATCTTAGACTGGGAATGAACTCC
* * ** * * * *
19695 GTATGCCTAAGCAAACCAATAAAACAAGCAGGCGGGTGGGCACTACGTCGGCCAGAGCGGCGGGA
308 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* * *
19760 TGCACAAGCCGTAGATGGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
373 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
* *
19825 CAATGCAATTTTTATGGCTTGTAAATTCATAGAATGGTCCC---A----TCATGTGAAGTTTCAT
438 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
*
19883 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
503 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGATTTTTT-A
* * * * * * *
19948 AAAATTTTTT--AG------AAGGAGTTTTTGGCCGAAGCATGGTGGATGTGATCCTTGTATTTT
566 AAATTTTTTTAAAGATTTTTAAAGAG-TTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
20005 TGTTGGCAAGCACAAAAAAATTCAGCTAAAAACTCGTAGTGTACAAGATTTTGTGAACATTTGAA
630 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAA
* * *
20070 AAAAGTGTCCCCATTTCAAACACTTTAATGCCTACTGGTAGCAAACCTGTAAAATCTCAAATGCT
695 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
20135 CTTTAAGGGGCTATGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTAC
760 CTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * *
20200 CAGCACCCATCACACATCATGTGCGCACACCCCCCCGCCACCCCAATCGTCAGAACGCCAATG
824 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCC-CCCCAATCGTCGGAACCCCAATG
* ** * **
20263 CCGTCGGTCAGGTTCTCCGGTGATGCTCCGGTGATGGTG-CCCGAGG-GAAAAAAATACGGCACC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCG-GGCAAAAAAAATGTGGCACC
* * * * *
20326 AGCACATGCTCGAGCCCAGCATGTGCA-CTAGTAACCCTCGGTCTGGTCTGATCTTAAACTGGGA
65 AGCACATGCCCGAGCCCAGCATGTGCACCCA-CAACCCTCGGTCCGGTCTGATCTTACACTGGGA
* * *
20390 ATAAACTCCGTATGCTTAGACTGGGAATGAAATCAGTATGCCTAAGTCAACCCACGAAACGAGCG
129 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* *
20455 AGCGGACGCTCAGCCGGCCAGAGTGGTAGGATGCCCAAGCCGGGGATCGAACGGGTCCCCCTCTA
194 TGCGG-CGCTCAGCCGGCCAG-GAGG--GGA-G--CAAG-C-GGG-T----CGGGTCCCCC-CTA
* * ** * * *
20520 CATGCTGCCAATCCTACTGCTGCAACCCTCACTCCGGTCCGATCTTAGACTGGGAATGAACTCCG
244 CATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCG
*
20585 TATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
309 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* **
20650 GCGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCACACC
374 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* * * *
20715 AATGCCATTTTTATGGCTTGTAAATCCATACAACGGTCCCTTAAGCCCTAATGTGAAGTTTCATG
439 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * *
20780 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCTGGATTTTTTTAA
504 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGA-TTTTTTAA
* * * *
20845 AATTTTTTT--AG-------AAGCAGTTTTGGCCCCAACCTTGGTAGACGTGATCGTTGTGTCTT
567 AATTTTTTTAAAGATTTTTAAAG-AGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
20901 TGTTGGGATGCAAAAAAAAAATTCAGCTAAAAGCTCGAAGTGTACAGGATTTTGTGACCATTTGA
630 TGTTGGCATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGA
* ** *
20966 AAAAAGTGTCCACATTTCAGACACTTTAATCACTACTGGCAGCAAACGTGTAAAATCTCAAATGC
694 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
21031 TCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
759 TCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
21096 CTAGCA--CATCGTACAT-ATGTGCGCACA---CCCCGCCCCTCCAATCGTCGGAACCCCAAATG
823 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCC-CCAATCGTCGGAACCCC-AATG
* * * * * * * * *
21155 TCGCCGATCAGGTT-TCCCGGTGATGCTCCGACGACGGTGCCCCAAGCGAAAAAAAAATGCGACA
1 CCGTCGGTCAGGTTCT-CCGGCGATGCTCCGACGATGGTGCCCC--GGGCAAAAAAAATGTGGCA
* * *** * * * * *
21219 CTAGCACATGCCCGAGGCCAGCATGTGCACATGCAACCCTCAGTCCAGTATGATCCTACACTAGG
63 CCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGG
*
21284 AATGGAA-TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
128 AAT-GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * *
21348 CGTGCGGGAGCTCAGCTGGCCAGAGGGGCAGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCCT
192 CGTGC-GGCGCTCAGCCGGCCAG-GAGG--GGA-GC--AAG-C-GGG-T----CGGGTCCCCCC-
* * ** * * * *
21413 TACATGCTGCCAATCCAGCTGCCACAACCCTTGGTCCGGTCTGATCTTAGGCTGGGAATGAGCTT
242 TACATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTC
* * *
21478 CGTATGCCTAAGTCAACTGACGAAACGAGCGGGCGGGCGGGCACTACGCCGG-CAGAGAGGCGGG
307 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
* * *
21542 ATGCGCACGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATA
372 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
21607 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
437 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * * * **
21672 TGGGAAGACGACTCGTTTTCTATTTTTCGCGATCTTTAAAACTATTTATAGTTCAGGATTTTTTT
502 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCA-GA-TTTTTT
* * *
21737 AAAA--TTTTTACAG------AAGGAGTTTTGAGCCCAAACATGGTAGACGTGATCCTTGTATTT
565 AAAATTTTTTTAAAGATTTTTAAAGAGTTTTG-GCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
21794 CTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTATAGGATTTTGTGACCATTTGA
629 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGA
21859 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
694 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
21924 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTA
759 TCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
21989 CGAGCACCCATCACACATCATGTGCGCACA-CCCCCCGTCCCCCCAATCGTCGGAACCACAATG
823 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-CCCCCCAATCGTCGGAACCCCAATG
* ** *
22052 CC-CCGGTCAGGTTCTCCGATGATGCTCCGATGATGGTGCCCCGGGCAAAAAAAAATGTGGCACC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGC-AAAAAAAATGTGGCACC
** * * * *
22116 AGCACATGCCCGAGCCCAGCATGTGCACCCTTAACCCTTGGTCTGGTCCGATCCTACACTGGGAA
65 AGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAA
* * *
22181 TGAACTCCGTATGCTTAGACTGGGAATGAATTCCGTATGCCTAAGTCAACCAATGAAACGAGCGT
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* *
22246 GCGGGAGCTCAGCTGGCCA-GACGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCCTTA
195 GC-GGCGCTCAGCCGGCCAGGA--GG--GGA---GCAAG-C---G---GGTCGGGTCCCCCC-TA
* * * * * ** * *
22310 CATGCTGCCAATCCAGCTGCCTCAACCCTCGGTCCGGTCCAATCTTAGGCGGGGAATGAACTCCG
244 CATGCTGCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * * * *
22375 TATGCCTAAGCCAATCGACGAAACAAGCAGGCTGGCGGGCACTACGCCGGCCAGAGAGTCGTGAT
309 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* * *
22440 TCGCAAGCCGTGGATCGATAGGGTGGTGGGTGGGTTTAGGCACATCTTCATATTTATGCCATGCC
374 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
*
22505 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTCAGCCTTCATGTGAAGTTTCATG
439 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * *
22570 GCAAGACAACTCGTTTTCTATTTTTCACGATTTTGGAAACTTTTTATGGTTCGAGATTTTTTTAA
504 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGA-TTTTTTAA
* * *
22635 AA-TTTTTT-CAG------AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCGTGTAATTTT
567 AATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGT-ATTTT
* * *
22692 T-TTGGCATACACAAGAAAATTCAACTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAA
630 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAA
* * *
22756 CAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGAAAAATCTCAAATGCT
695 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * * * *
22821 CTTTAAGGGGGTGTGAGCTCTTGAGGTTAGATGAGGGATAGAGGGCCAATATAAGGGCCACGTAC
760 CTTTAAGGGGGTGTGAGTTC-TCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* *
22886 CAGCACCCATCGCACATCATGTGAGC-CAGCCCCCCGCCCCCCAAATCGTCGGAACCCCAATG
824 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCC-AATCGTCGGAACCCCAATG
* * * *
22948 CCGTCGGTCAGGTTCTCCTGCGATGCTCTGGCGATGGTTCCCCGGGCAAAAAAGAAATGTGGCAC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGC-AAAAA-AAATGTGGCAC
* * * * *
23013 CAGCACATGGCCGAGCCCAGCATGTGCACCCACAACCCTTGATCCGGT-TGGATCTTACATTGGT
64 CAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCT-GATCTTACACTGGG
* * ** *
23077 AATGAACTTCGTATGCTTAGATTGGGAATGAACTCTTTATGCCTAAGTCAACCCACGAAACGAGA
128 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
*
23142 GTGCGGGCGCTCCA-CCGGCCAGAAGGGCAGGACGCACAAGTCGGAGATCAGTCGGGTCCCCCCC
193 GTGC-GGCGCT-CAGCCGGCCAGGA-GG--GGA-G--CAAG-C-G-G----GTCGGGT-CCCCCC
* * * ** *
23206 TGCATGCTACCGATCCTGCTGTCGGAACCCTCTG-TCAGGT-TCGATCTTAGACTGGGAATGAAC
242 TACATGCTGCCGATCCTGCTGCCACAACCCTCAGTTC-GGTCT-GATCTTAGACTGGGAATGAAC
* * * * ** * * *
23269 TCCGTCTGACTAAGCCAACCAACGAAACGAGCGGGTGGGTAGGCACTACATCGGCCAGAAAGGCC
305 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG
23334 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
370 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* *
23399 CGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAATTTT
435 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
*
23464 CATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTGAAAACTTTTTACGGTTCGAGATTTT
500 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG-AAACTTTTTACGGTTC-AGA-TTT
*
23528 TTTAAAATTTTTTT--AG------AAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTA
562 TTTAAAATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTA
* * * * *
23585 TTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCGATGTGCACAAGATTTTGTGACCATT
626 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATT
* * * *
23650 TGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTAGTAGCAAACCTATAAAATCTCAAA
691 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
*
23715 TGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
756 TGCTCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
23780 GTACCAGCACCCATCGCACATCATGTGCGCACAACCCCCCCCCCCCGCCGCCCCAATCGTCGGAA
820 GTACCAGCACCCATCGCACATCATGTGCGCAC-A-----CCCCCCCGCC-CCCCAATCGTCGGAA
* *
23845 CTCCAATA
878 CCCCAATG
* * * * *
23853 CTGTCGGTCAGGTTCTCCGGCAATGCTCCAACAATGGTGCCTCGGGCGAAAAAAAATGTGGCACC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGC-AAAAAAAATGTGGCACC
* ** ** * * *
23918 AGCACATGCCCAAGCCCAGCATGTGCACCCGTAACCCAAGATCCGATCTGATCTTAGACTGGGAA
65 AGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAA
* * *
23983 TGAACTCTGTACGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGT
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * *
24048 GCAGGCGCTCAGCC-GACAAGAGGGGCATCATGCTTAAGCCGGGGATC-GGTCGGGTCCCCCTGC
195 GC-GGCGCTCAGCCGGCCAGGAGGGG----A-GC--AAG-C-GGG-TCGGGTC----CCCCCTAC
* * * * * * * * *
24111 GTGGTGCCGATCCTGCTGTCACAACCCT-TGGTCTGGGCTGATCTTTGATTGGGAATGAACTCTG
245 ATGCTGCCGATCCTGCTGCCACAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * **
24175 TATGCCTAAGGCAACCGACAAAACGAGCAGGCGGGCGAGCGGGCACTACGTCGGCTAGAGAGGTA
309 TATGCCTAAGCCAACCGACGAAAC--G-A-GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG
* *
24240 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAATTCTACCA
370 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* *
24305 TGCCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGATGTTT
435 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * *
24370 CATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCAGGATTTTT
500 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCA-GA-TTTT
* * * *
24435 TTAAAA-TTTTTT-CA-A-----AAAGAGTTTTGGGCCGAAACCTGGTAGACGTGATCCTTGTAG
563 TTAAAATTTTTTTAAAGATTTTTAAAGAGTTTT-GGCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
24492 TTTT-TTGGCATGCACAAAAACATTCAGCT-AAAACTCGAAGTGTATAGGATTTTGTGACCATTT
627 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTT
24555 GAAAAAAGTGT-CCCATTTCAGGACACTTTAATGGCTACTGG-AGC-AACCTGTAAAATCTCAAA
692 GAAAAAAGTGTCCCCATTTCA-GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* *
24617 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATATGGGCCAA
756 TGCTCTTTAAGGGGGTGTGAGTTCTC-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * *
24682 GTACCAGCACCCATCGCACATTATGTGCGTACAACCCCCCCGCCCCCTCAATCATCGGAACCCCA
820 GTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCCGCCCCC-CAATCGTCGGAACCCCA
24747 ATG
883 ATG
** * ** ** * * * *
24750 CCACCGGTCAGGTTCTCTGGTAATGCTATGATGGTGGTGCCCCGGGTGAAGAAAAATGTGGCACC
1 CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGG-CAAAAAAAATGTGGCACC
* *** *
24815 AGCACATGCCCGTGCCCAGCATGTGCACCTGTAACCCTCGGTCCGGTCCGATCTTACACTGGGAA
65 AGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAA
* * * * * * * *
24880 TGAAATCCGTATGCTTAGACTTGGTATTAACTCTGTATGCGC-AAGTCAACCCATGAAATGAGGG
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC-CTAAGTCAACCCACGAAACGAGCG
* * * * *
24944 TACGGGCGCTCAGTCGGTCA-GAGGGGCAGGATCCACAAGTTGAGGATCGGTCGGGTCCTTCCCT
194 TGC-GGCGCTCAGCCGGCCAGGAGGGG-A-G-----CAA---G-CG---GGTCGGGTCC-CCCCT
*** * * * * * *
25008 GTGTGCTAG-CGATCCTACTACCGCAACCCTTAGTTCAGTCTGGTCTTAGACTGGGAATGAACTC
243 ACATGCT-GCCGATCCTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTC
* * ** * *
25072 CATCTGCCTAAGCCAACCGGTGAAACGAGCGGGCGGGCGGGCACTACGTCGGTC-GAGAGGCGAG
307 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
** * * *
25136 ATGAACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTCGGCATATCTTCATATTTCTACCATG
372 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
*
25201 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTAA
437 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * *
25266 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGAGATTTTTTT
502 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCAGA-TTTTTT
* * *
25331 AAAA-TTTTTT-CAG------AAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTT
565 AAAATTTTTTTAAAGATTTTTAAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTA-TT
* * * **
25388 TTTGTTGGCATGCACAAAATAATTCAGCTAAAAACTTGAAGTGTACAGGACTTTGTGACTGTTTG
628 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTG
* *
25453 AAAAGAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATA
693 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * * *
25518 CTCTATAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCGAGT
758 CTCTTTAAGGGGGTGTGAGTTC-TCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * *
25583 ACCAGCACCCATCACACATCATGTGCGTATA--CCCCCGCCCCCCAATCGTCGAAACCCCATTG
822 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
* * ** * * * * *
25645 TCGTCGGTCAGGTTCTCCGACGATGCTTTGGA-AATGGTGCCTCGGGC-GAAAAAATGTTGTACC
1 CCGTCGGTCAGGTTCTCCGGCGATGC-TCCGACGATGGTGCCCCGGGCAAAAAAAATGTGGCACC
* * * ** *
25708 AGCACATGCCAGAGCCCAACATGTGCACCCACAACCCTCAGTTTGGTCCGATCTTACACTGGGAA
65 AGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAA
*
25773 TGAGCTCCGTATGCTTAGACTGGGAATGAACTCCCGTATGCCTAAGTCAACCCACGAAACGAGCG
130 TGAACTCCGTATGCTTAGACTGGGAATGAACT-CCGTATGCCTAAGTCAACCCACGAAACGAGCG
** * *
25838 TGCGGGCGCTCAATCGACCAAAGG-GGCAGGATGCGTAAGCCAGGGATCATCGGGTCCCCACCTG
194 TGC-GGCGCTCAGCCGGCC--AGGAGG--GGA-GC--AAG-C-GGG----TCGGGTCCCC-CCTA
** * * * * * * * * *
25902 TGTGTTGCCGCTCTTGGTGCCATAACACTC-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCT
244 CATGCTGCCGATCCTGCTGCCACAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCC
* * * *
25966 GTATACCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGGTGGGA
308 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* * * *
26031 TGCGCAAGCCATGGATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTTTGTCATGC
373 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
26096 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
438 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
**
26161 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCAAGATTTTTTAA
503 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGATTTTTT-A
* * * *
26226 AAATTCTTTCAAAG---------GAGTTTTGGGCCCAAACCTGGTAGATGTGATCCTTGTAGTTT
566 AAATTTTTTTAAAGATTTTTAAAGAGTTTT-GGCCCAAACTTGGTAGACGTGATCCTTGTA-TTT
* * *
26282 TT-TTGGCATGCACAAAAAAATTCAGCTAAAAACTC----TGTA-TGGCCATTTCGTGGCCATTT
629 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGG--ATTTTGTGACCATTT
* **
26341 GAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTAACAGCAAACCTGT-AAATCTCAAAT
692 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
26405 GCT-TAGTTAA-GGGGTGTGAGTT
757 GCTCT--TTAAGGGGGTGTGAGTT
26427 NNNNNNNNNN
Statistics
Matches: 12226, Mismatches: 1548, Indels: 811
0.84 0.11 0.06
Matches are distributed among these distances:
869 294 0.02
870 3 0.00
871 3 0.00
872 181 0.01
873 67 0.01
874 12 0.00
875 59 0.00
876 174 0.01
877 84 0.01
878 49 0.00
879 16 0.00
880 5 0.00
881 5 0.00
882 138 0.01
883 23 0.00
884 98 0.01
885 289 0.02
886 554 0.05
887 581 0.05
888 291 0.02
889 781 0.06
890 157 0.01
891 29 0.00
892 97 0.01
893 562 0.05
894 910 0.07
895 676 0.06
896 1244 0.10
897 1137 0.09
898 1234 0.10
899 460 0.04
900 475 0.04
901 487 0.04
902 285 0.02
903 197 0.02
904 209 0.02
905 100 0.01
906 254 0.02
907 6 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (885 bp):
CCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGGCAAAAAAAATGTGGCACCA
GCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAAT
GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
CGGCGCTCAGCCGGCCAGGAGGGGAGCAAGCGGGTCGGGTCCCCCCTACATGCTGCCGATCCTGC
TGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
ACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGATTTTTTAAAATTTTTTTAAAGATTTTT
AAAGAGTTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCCGCCCCCCAATCGTCGGAACCCCAATG
Found at i:20414 original size:26 final size:26
Alignment explanation
Indices: 20378--20430 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
20368 CTGGTCTGAT
*
20378 CTTAAACTGGGAAT-AAACTCCGTATG
1 CTTAAACTGGGAATGAAA-TCAGTATG
*
20404 CTTAGACTGGGAATGAAATCAGTATG
1 CTTAAACTGGGAATGAAATCAGTATG
20430 C
1 C
20431 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 21 0.88
27 3 0.12
ACGTcount: A:0.34, C:0.17, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAAATCAGTATG
Found at i:23999 original size:26 final size:26
Alignment explanation
Indices: 23970--24019 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
23960 CCGATCTGAT
23970 CTTAGACTGGGAATGAACTCTGTACG
1 CTTAGACTGGGAATGAACTCTGTACG
23996 CTTAGACTGGGAATGAACTCTGTA
1 CTTAGACTGGGAATGAACTCTGTA
24020 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.18, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTACG
Found at i:25789 original size:26 final size:27
Alignment explanation
Indices: 25760--25813 Score: 83
Period size: 26 Copynumber: 2.0 Consensus size: 27
25750 TTGGTCCGAT
*
25760 CTTACACTGGGAATGAGCT-CCGTATG
1 CTTACACTGGGAATGAACTCCCGTATG
*
25786 CTTAGACTGGGAATGAACTCCCGTATG
1 CTTACACTGGGAATGAACTCCCGTATG
25813 C
1 C
25814 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
26 17 0.68
27 8 0.32
ACGTcount: A:0.24, C:0.24, G:0.26, T:0.26
Consensus pattern (27 bp):
CTTACACTGGGAATGAACTCCCGTATG
Found at i:30859 original size:26 final size:26
Alignment explanation
Indices: 30829--30881 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
30819 GGTCTCACGG
30829 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
30855 GCATATGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
30881 G
1 G
30882 ATTGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:31750 original size:26 final size:26
Alignment explanation
Indices: 31721--31773 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
31711 GTTGACTTAG
31721 GCATAC-GATGTTCATTCCCAGTCTAA
1 GCATACGGA-GTTCATTCCCAGTCTAA
*
31747 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
31773 G
1 G
31774 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:34405 original size:26 final size:26
Alignment explanation
Indices: 34369--34421 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
34359 GTTGACTTAG
34369 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
34395 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
34421 G
1 G
34422 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:34611 original size:896 final size:884
Alignment explanation
Indices: 30828--39098 Score: 9247
Period size: 896 Copynumber: 9.5 Consensus size: 884
30818 TGGTCTCACG
* * *
30828 GGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTGTAAGATTGGACCAGA
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
* * * *
30893 CCAAGGGTTACGGGTGCACATGCTGGGCTCGAGCATGTGCTGGTGCCACATTTTTTTTCGCCCAG
66 CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCCAG
*
30958 GGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATT-GGGG
131 GGCACCA---T-------TCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGG
*
31022 GGTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
186 GGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
31087 TCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
251 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
31151 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACAC
316 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACAC
* *
31216 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGT
381 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
31281 TTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAAT-CCGAACCGTAAAAAGTTTCAAAAAT
446 TTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
31345 CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGT
511 CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGT
* * *
31410 ATGAATTTACAAGCCATAAAAACGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCGC
576 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCAC
* * * * * *
31475 CTACCAGCCAATCGATGCATGGCTTGCGCATGCCGCCTCTCTGGTCGGCGTAGTGCCCGCCCGCC
641 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCC
* * * * *
31540 CGCTCGTTTCATCAGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGTACC-AGACC
706 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGAGATC
* ** * *
31604 GAGGGTTG-GGCAGTAGGATCGGTAGCACATAGAGGGGGACCCGGTTGATCCCCGGCTTCTGCAT
771 GAGGGTTGTGGCAGTAGGATCGGCAGCACGCAG-GGGGGACCCGGTCGATCCCCGGCTTGTGCAT
* * * * **
31668 CCTGCCCCTCTGGCAAGTTGAGTGCCTGCA---TACGATTTCGTGGGTTGACTTA
835 CCTACCCCT-TTGCGA-CTGAACGCC-GCACGCT-CG-TTTCGTGGGTTGACTTA
*
31720 GGCATAC-GATGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGATCGG
1 GGCATACGGA-GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGG
* * * *
31784 ACCGAGGGTTACGAGTGCACATGCTGGGCTTGGGCATGTGCTGGTGTCGCATTTTTTTTCGCCCA
65 ACCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCCA
* ** * *
31849 GGGCACCATCGTCGGAGCATCACCGGAGAACCTGACAGGCGGCATTGGGGTTTAGGCTATTGGGG
130 GGGCACCAT--TC---G-----CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGG
* *
31914 GGGCGAGGGGGGTGTGCGCACATGATATGCGCTGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
185 GGGC--GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
31979 CTGTCCCTCAACAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
248 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
32044 CTG-CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
313 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
32108 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAATACAAGGATCACGTCTACCA
378 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCA
*
32172 AGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAA
443 AGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAA
*
32237 AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCAT
508 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCAT
*
32302 TGTATGAATTTACAAGCCAT-AAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACC
573 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACC
*
32366 CACCTACCACCCTATCGATCCACGGCTTGCGCAT-CCGCCTCTCTGGCCGGCGTAGTGCCCGCTC
638 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCC
* * ***
32430 GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-GAATTAG
703 GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGAG
* * * * * ** * * *
32494 ATAGAGGGTTGCGGCAGTAGGATCGGCAGCAGGCAGGGGGGACCTGGTTGATCCTAGTCTTTTGT
768 ATCGAGGGTTGTGGCAGTAGGATCGGCAGCACGCAGGGGGGACCCGGTCGATCCCCGGCTTGTGC
* * **
32559 ATCCTGCCCCTTGGCTGGTTGAACGCCTGCACGCTCGTTTCGTGGGTTGACTTA
833 ATCCTACCCCTTTGC-GACTGAACGCC-GCACGCTCGTTTCGTGGGTTGACTTA
*
32613 GGCATACGGAG----TT--CA-T-T---C---C------CA-----A-TGTAAGATCGAACCGGA
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
* * ** * * *
32652 CCGAGGGTTGTGGATGCACATGCCAGGCTTGGGCATGTGCTGGTGTCACATTTTTTTTCGCCCAG
66 CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCCAG
* * * *
32717 GGCACCA-TCGTCGGAGAACCTGACTGGCGGCATTGGGGTTTCGATGATTGGGGGGGCGGAGGGG
131 GGCACCATTCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGGCGG-GGGG
* * *
32781 TGTGCGCACATGATATGCAATGGGTCCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
195 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
* * * *
32846 AAACCTTGATAACTC-CACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCAAGTAGCC
260 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
* *
32910 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTTGAATTT
325 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTT
*
32975 TTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTATACCAAGTTTGGGGCCA
390 TTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* * * *
33040 AAATTCCTTCTGAAAAAATTTTAAAAAAATCCCAAACTGTAACAAGTTTCAAAAATCATGAAAAA
455 AAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAA
* *
33105 TAGAAAACGAGTCATCTTGCCATGAAACTTCTCATGAAGGCTTAAGGGACCATTGTATGAATTTA
520 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
33170 CAAGCAATAAAAATGGCATTGGCATGGCTGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
585 CAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* **
33235 TATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCTCCCGCCCATTCGTTT
650 TATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTT
* * * *
33300 CGTCGATTGGCTTAGGCATAC-AGAGTTCATTCCCAGTCTAAGATCGGATC-AGATCGAGGGTTA
715 CGTCGGTTGGCTTAGGCATACGA-AGTTCATTCCTAGTCTAAGATCGGACCGAGATCGAGGGTTG
* * * * * * ** * *
33363 CGACAGCAGGATCGGCAGGATGCGGGAGGGGACCCGACCAATCCCCGGCTTGTGCATCCTGCCCC
779 TGGCAGTAGGATCGGCAGCACGCAGG-GGGGACCCGGTCGATCCCCGGCTTGTGCATCCTACCCC
* * *
33428 TCTTACCAGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTA
843 T-TTGCGA-CTGAACG-CCGCACGCTCGTTTCGTGGGTTGACTTA
* * ** **
33473 GGCATACGGAGTTCATTCCCAGTCTAAGCAAACGGAGTTCATTCCAAGCATAAGATCGGACTAGA
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
* * * **
33538 TCGAGGGTTGTGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTTGCCTGG
66 CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCCAG
* **
33603 GGCACCA-TCGCCGGAGTATCACCGAAGAACCTGACCGGCGGCACTT-GAGTTCCGGTGATT--G
131 GGCACCATTCGCC---G-------G-AGAACCTGACCGGCGGCA-TTGGGGTTCCGACGATTGGG
* *
33664 GGGGCAGGGGGGTGTGCGCACATGACGTGCGATGGGTGCTTGTACTTGGCCCTTATATTGGCCCC
184 GGGGC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
33729 CTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCACTTGAGATTTTACAGGTTTG
248 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
* * *
33794 CTTCCAATAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
313 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
* * * *
33859 CATTTCAAGTTTTTAGCTGAAATTTTTTGTGCACGCCAAAAAAAATACAAGGATCACGTCTACCA
378 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCA
* * *
33924 AGTCTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACAGTAGAAAGTTTCAAA
443 AGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAA
* * *
33989 AATCATGAAAAATAGAAAGCGAGTCATCTTGCCATGAAACTTCACATGAAGGCTTAAAGGACCAT
508 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCAT
* * *
34054 TGTATGAATTTACAGGCCATAAAAATGGCATTGGAAAGGCAGAAATATGAAGATGTGCCTAAACC
573 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACC
* *
34119 CACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAATGCCCGCCC
638 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCC
* *
34184 GGCCGCTCGTTTCGTCGGTCGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGA-
703 GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGAG
* * * * * *
34248 ATTGAGGGTTGTGACAGTAGGATTGGCAACACGCAGGGGGGACCCGGTTGGTCCCCGGCTTGTGC
768 ATCGAGGGTTGTGGCAGTAGGATCGGCAGCACGCAGGGGGGACCCGGTCGATCCCCGGCTTGTGC
* *
34313 ATCCTACCCCTTTGGTCGACTGAACGGTCACACGCTCGTTTCGTGGGTTGACTTA
833 ATCCTACCCCTTT-G-CGACTGAAC-GCCGCACGCTCGTTTCGTGGGTTGACTTA
34368 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
** * *
34433 CCGAGGGTTATGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTA-TTTTTTTCGCCCGG
66 CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCCAG
*
34497 GGCACC-TTCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATTGGGGGGGCGGGGGGT
131 GGCACCATTCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGGCGGGGGGT
34561 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
196 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * * *
34626 AACCTTGAGAACTTACACCCCTTTAAAGAGCATTTGAGAATTTACAGGTTTGCTGCCAATAGCCA
261 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
34691 TCAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTT
326 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTT
* * * *
34756 TAGCTGAATTTTTTTGTGCATGCCAACATAAATACAAGGATCATGTCTACCAAGTTTGGGGCTAA
391 TAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* *
34821 AACTCCTTCTGAAAAAATTTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAAT
456 AACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAAT
* *
34886 ATAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAACGGACCATTGTATGAATTTA-
521 AGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTAC
* *
34950 AAACCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTTCCTAAACCCACCTACCACCCT
586 AAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* **
35015 ATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCAGCGTAGTGCCCGCCCGCCCGCTTATTTC
651 ATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTC
* ** * ** * *
35080 GTCGATTCACTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTAGATCGA-ACCGAGGGTTGTG
716 GTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGAGATCGAGGGTTGTG
* * * * **
35144 GCAGAAAGATCGACAGCACACAGGGGGGACCCGAG-CGATCCCCGGCTTACGCATCCTACCCCTC
781 GCAGTAGGATCGGCAGCACGCAGGGGGGACCCG-GTCGATCCCCGGCTTGTGCATCCTACCCCT-
* * * * *
35208 TTGCCGGCTGAGCGCCCGTACGCTCATTTGGTGGGTTGACTTA
844 TTG-CGACTGAACG-CCGCACGCTCGTTTCGTGGGTTGACTTA
** * * * * *
35251 GGCATACAAAGTTCATT-CCAGTCTAAGCATACGGAGTACATTCCTAGTGTAAAATCAGACCTGA
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
* *
35315 CCGAGGGTTGCCGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTTTTCGTCCCA
66 CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCG-CCCA
* * ** *
35380 -CGCACCATCGTCGGAGCATCGTCGGAGATCCTGATAGGCAGCATTGGGGTTCCGACGATTGGGG
130 GGGCACCAT--TC---G---C--CGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGG
35444 GGGCTGTGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
185 GGGC-G-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
35509 CTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
248 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
35573 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
313 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
35638 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAATACAAGGATCACGTCTACCA
378 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCA
35702 AGTTTGGGGCCAAAACTCCTTCT-AAAAAATTTT-AAAAAATCCCGAACCGTAAAAAGTTTTCAA
443 AGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAG-TTTCAA
*
35765 AAATCGTGAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACC
507 AAATCATG-AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACC
*
35830 ATTGTATGAATTTACAAG-CATAAAAATGGCATTGGCATGGTAGAAATATGAAGATGTGCCTAAA
571 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAA
*
35894 CCCACCTACCA-CCTATCGATCCACGGCTTGCGCATCCC-CACTCTCTAGCCGGCGTAGTGCCCG
636 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGC-CTCTCTGGCCGGCGTAGTGCCCG
* * *
35957 CCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATAC-AGAGTTCATTCC-CGTCTAAGATCAGAC
700 CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGA-AGTTCATTCCTAGTCTAAGATCGGAC
* *
36020 CGA-ACTCGA-GGTTGTAGGCAGTA-GATCGGTAGCACGCAGGGGGGGACCCGATCGATCCCGCG
764 CGAGA-TCGAGGGTTGT-GGCAGTAGGATCGGCAGCACGCA-GGGGGGACCCGGTCGATCCC-CG
* * * * **
36082 GC-TGCGCATCATA--CCTCTGCCGGCTG-A-GCCTTACGCTCAGTTATC-TGGGTTGACTTA
825 GCTTGTGCATCCTACCCCTTTG-CGACTGAACGCCGCACGCTC-GTT-TCGTGGGTTGACTTA
* * *
36139 GGCA-ACGGGGTT-ATTCCCA-TCTAAGCATATGGAGTTACATTCCCAG-GGATAGATC--A--G
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT-CATTCCCAGTGTA-AGATCGGACCG
* * *
36196 GGCCGAAGGATTGCGGGTGCAAATGCTGCGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCG-
64 GACCG-AGGGTTGCGGGTGCACATGCTG-GGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGC
* * * * *
36260 CCAGGGTCACCATTCGGGCATCGCGGATAACTTGAACGGCACGCA-T-GGGTTCC-TC-ATTGGA
127 CCAGGG-CACCATTC--G---C-CGGAGAACCTGACCGGC-GGCATTGGGGTTCCGACGATTGG-
36321 TGGCGGTGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGTT
183 -GG-GG-GCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC-T-TATA-TT
* * *
36386 GG-CCCCTATCCC-CATCTAACCTCAAGAGCTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
242 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
*
36449 GGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
307 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
36514 CCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTGTGCATGGCC-AAAAAAATACAAGGATCAC
372 CCTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTTGTGCAT-GCCAAAAAAAATACAAGGATCAC
* * *
36578 GTCTACCAAGTTTGGGGCCAAAAACTCCATTTCTGAAAAAAATTTAAAAAAATCTCAAACCGTTA
435 GTCTACCAAGTTTGGGGCC-AAAACTCC--TTCTGAAAAAATTTTAAAAAAATCCCGAACCG-TA
* * *
36643 AAAAGTTTCAAAAATCATGAAGAATATAAAACGAGTCATCTTGCCCATGAAACTTCACATGGAAG
496 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG-CCATGAAACTTCACAT-GAAG
* *
36708 GCTTAAGGG-CCATTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGG
559 GCTTAAGGGACCA-TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGA
*
36772 AGATGTGCCTAAACCCACCTACCACCCTATCGA-CCA-GGCTTGCGCATCCCGCCTATCTGGCCG
623 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCG
* * *
36835 GCGTAGTTCCCGCCCGCCCACTCGTTTCGTCGGTT-G--T-GGC-TAC-AAATT-A-T-CTCAGT
688 GCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCT-AGT
* * **
36891 CT-AG--C--A--G-GA-CGA-AGTT-CGG-A--AGGAT---CAG--C-CA-GGTTGA--C-G--
752 CTAAGATCGGACCGAGATCGAGGGTTGTGGCAGTAGGATCGGCAGCACGCAGGGGGGACCCGGTC
* * * * * * * * * * *
36930 AAT-CCAGAC-T-TG-AACC--CTCC-TGGCCAGCTGAGCGCC-CA-G-TC-TAT-ATAGAGTTG
817 GATCCCCGGCTTGTGCATCCTACCCCTTTGCGA-CTGAACGCCGCACGCTCGTTTCGT-GGGTTG
36983 ACTTA
880 ACTTA
* *
36988 GGC-T-CGGA----A-T-CCAGTGTAA--TTA---AG--C---CCCAGTGTAAG---GG---GG-
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
* * * *
37028 -CGA----TGCGGGTACACATGCTGGGCTCGGACATGTGCTGGAGCCGCATTTTTTTTTCGCCTA
66 CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA-TTTTTTTTCGCCCA
* * * * * *
37088 AGGCACCATCACCGGAGCATCAACGGAGAACTTGACTGACGGCATTGGGGTTCCGGCGATT----
130 GGGCACCAT--TC---G---C--CGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGG
* *
37149 ----GGGGGGTGTGCGCACATGATGTGTGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCT
185 GGGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
* * * *
37210 ATCCCTTATCAAACCTTGAGAACTCACACCCCCTTAAAGAGAATTTGAGATTTTATAGGTTT-CT
250 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
* * *
37274 GCCAGGAGCCATTAAAGTGTCTAAAATGGGGA-AGTGTTTTTCAAATGGTCACAAAATCCTGTAC
315 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT-TTTTTCAAATGGTCACAAAATCCTGTAC
* * * * *
37338 ACTTCGAGGTGTTAGCTAAATTTTTTTGTGCATGCCAAAAAAAATGCAAGGATCACGTGTACCAA
379 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAA
* *
37403 GTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAA-CCTTGAATCGTAAAAAGTTTCAAA
444 GTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCC-CGAACCGTAAAAAGTTTCAAA
* * *
37467 AATCGTGAAAAATACAAAACGAGTCGTCTTCCCATGAAACTTCACATGAAGGCTTAAGGGACCAT
508 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCAT
* * *
37532 TGTATGAATTTACAAGCCATAAAAATTGCA-TGCACACGGCAGAAATATG--GATGTGCCT-AAC
573 TGTATGAATTTACAAGCCATAAAAATGGCATTG-GCATGGCAGAAATATGAAGATGTGCCTAAAC
* * ** *
37593 CCACCTACCA-CCTATCGAT-CACGGACTT--G-ATGCACG-TTCTCT-G-CAAC-TAGTG-CCA
637 CCACCTACCACCCTATCGATCCACGG-CTTGCGCAT-CCCGCCTCTCTGGCCGGCGTAGTGCCCG
** * * * * *
37648 CTTG-CCGCT-G---AG-C----CGC-TAGGCAT-CGGA-TT-TTTCC-AGTCTAAGA---AACA
700 CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGAC-
** * * ** * * * * *
37695 AAAGAT-TA-GGTAGTAGG-AGT-TCAT--G-AG-ATGCCA--AGGGA--TGATCGAT---CAGC
764 CGAGATCGAGGGTTGT-GGCAGTAGGATCGGCAGCACG-CAGGGGGGACCCGGTCGATCCCCGGC
* * * * * * *
37745 TTG-ACATCTTTCCCCTCTGGCGGCTG--CTGCC-AAC-C-C-TTT-TTAGGG-TGACTT-
827 TTGTGCATCCTACCCCT-TTGCGACTGAAC-GCCGCACGCTCGTTTCGT-GGGTTGACTTA
* * *
37796 -GCAT-C---GTT-A---GC-G-C-AAGCATACGAAAGTT-TTTCCCAGTGT-AGATCGGA-C--
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACG-GAGTTCATTCCCAGTGTAAGATCGGACCGG
* * * * *
37844 A---ATGG-TGCTGGAGTGCACAT-TTGGGCTCGAG-ATGT--T--T--CACATTTTTTTT--TC
65 ACCGAGGGTTGC-GG-GTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCC
* * * *
37895 C-GGGCACCAGTTTGGCATCGTCGGAGAACCTAACCCGCGGCATTAGGGTTTCCGACGATTGGGG
128 CAGGGCACCA---T----TCGCCGGAGAACCTGACCGGCGGCATT-GGGGTTCCGACGATTGGGG
* * ***
37959 GTG-GGGGGG-GTGCACACATGATGTGCTG-TGGGTGCTAAAACTTGGCCCTTATATTGGCCCCC
185 GGGCGGGGGGTGTGCGCACATGATGTGC-GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* *
38021 TATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGC
249 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
*
38086 TGCCAGTAGCCATTAAAGTGTCTGAAA-GTGGGACACTTTTTTCAAATGGTCACAAAATCCTATA
314 TGCCAGTAGCCATTAAAGTGTCTGAAATG-GGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
* *
38150 CACTTCGAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAAAAAAAAATAGAAGGATCACGTCTGCC
378 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAAATACAAGGATCACGTCTACC
* * * *
38214 ATGTTTGGGGCCAAAACTCCTTCTGAAAATATTTTAAAAAAATCCTGAACCGTAAAAAGTTTTAA
442 AAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAA
* *
38279 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAAGGACCA
507 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCA
* *
38344 TTGTATGAATTTACAGGCCATAAAAATGGCATTGGCATGGTAGAAATATGAAGATGTGCCTAAA-
572 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAAC
* *
38408 CCACCTACCACCCTATCGATCCACGGCTTGCGTATCCCGCCTCTCTAGCCGGCGTAGTGCCCGCC
637 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCC
* * * *
38473 CGCCCGCTCGTTTCGTTGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGA
702 CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGA
* * * ** * *
38538 -ACCAAGGGTTGTGGCAGCAGGATCGAAAGCACGTAGGCGGGGACCCGGTCGATCCCCGGCTTGC
767 GATCGAGGGTTGTGGCAGTAGGATCGGCAGCACGCAGG-GGGGACCCGGTCGATCCCCGGCTTGT
* * * ** * * * *
38602 CCATCCT-GCCATTCTGGCTGGTTGAGCGCCCCGTATGCTCGTTTCATGGGTTGACTTA
831 GCATCCTACCCCTT-T-GC-GACTGAACG--CCGCACGCTCGTTTCGTGGGTTGACTTA
* * * *
38660 GGCAAACGGAGTTCATTCCCAGTCTAAGCATACGGACTTCATTCCCAGTGAAAGATCGGACCAGA
1 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
* * * * *
38725 TCGAGGGTTGCGAGTGCACGTGCTGGGCTCGGGCATATGCTGGTGCCGCATTTTTTTT-GCCCGG
66 CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCCAG
* * * * * *
38789 GGCACCATGTCGAAGCATCGACGGAGAACCTGACCGACGGTATTACGGTTTCC-ACGATTTGAGG
131 GGCACCAT-TC---G---C--CGGAGAACCTGACCGGCGGCATT-GGGGTTCCGACGATTGGGGG
* * *
38853 GACGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCT
186 GGC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
* * * *
38918 ATGCCTCATCAAACCTCAAGAACTCACACCCCTTTAAAAAGCATTTGAGATTTTACAGGTTTGCT
250 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
* *
38983 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCA-AAAATCTTGTACA
315 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACA
* ** *
39047 CTTCCAGTTTTTAGCTGAATTTTTTTACGCATGCCAACAAAAATACAAGGAT
380 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGAT
39099 TATGTCTAAA
Statistics
Matches: 6381, Mismatches: 631, Indels: 731
0.82 0.08 0.09
Matches are distributed among these distances:
792 1 0.00
793 1 0.00
794 11 0.00
795 6 0.00
796 3 0.00
799 1 0.00
800 9 0.00
801 4 0.00
802 7 0.00
803 6 0.00
804 3 0.00
805 26 0.00
806 33 0.01
807 19 0.00
808 26 0.00
809 10 0.00
810 73 0.01
811 31 0.00
812 170 0.03
813 296 0.05
814 14 0.00
815 31 0.00
816 72 0.01
817 95 0.01
818 61 0.01
819 61 0.01
820 8 0.00
821 2 0.00
822 5 0.00
823 27 0.00
824 36 0.01
825 5 0.00
826 1 0.00
827 9 0.00
828 16 0.00
829 9 0.00
830 1 0.00
831 5 0.00
833 9 0.00
834 9 0.00
835 4 0.00
836 3 0.00
837 4 0.00
838 9 0.00
839 3 0.00
840 4 0.00
841 9 0.00
842 4 0.00
843 3 0.00
844 5 0.00
845 4 0.00
846 2 0.00
848 9 0.00
849 14 0.00
850 6 0.00
851 3 0.00
852 6 0.00
853 14 0.00
854 52 0.01
855 179 0.03
856 211 0.03
857 79 0.01
858 114 0.02
859 32 0.01
860 46 0.01
861 4 0.00
862 10 0.00
863 7 0.00
864 6 0.00
865 4 0.00
866 3 0.00
867 83 0.01
868 2 0.00
869 4 0.00
870 4 0.00
871 2 0.00
872 2 0.00
873 3 0.00
874 8 0.00
875 4 0.00
876 20 0.00
877 8 0.00
878 7 0.00
879 2 0.00
880 58 0.01
881 37 0.01
882 245 0.04
883 357 0.06
884 450 0.07
885 61 0.01
886 107 0.02
887 37 0.01
888 50 0.01
889 55 0.01
890 112 0.02
891 66 0.01
892 248 0.04
893 317 0.05
894 429 0.07
895 728 0.11
896 777 0.12
897 31 0.00
898 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (884 bp):
GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGA
CCGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCCAG
GGCACCATTCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGGCGGGGGGT
GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTT
TAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
AACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAAT
AGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTAC
AAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
ATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTC
GTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGAGATCGAGGGTTGTG
GCAGTAGGATCGGCAGCACGCAGGGGGGACCCGGTCGATCCCCGGCTTGTGCATCCTACCCCTTT
GCGACTGAACGCCGCACGCTCGTTTCGTGGGTTGACTTA
Found at i:39344 original size:83 final size:83
Alignment explanation
Indices: 39204--39368 Score: 303
Period size: 83 Copynumber: 2.0 Consensus size: 83
39194 TACAAGCCAT
* *
39204 AAAAATGGCATTGGCACGGGAGAAATAAGAAGATGTGCCTAAAGCCACCTACCACCCTATCGATC
1 AAAAATGGCATTGGCACGGGAGAAATAAGAAGATGTGCCTAAACCCACCTACAACCCTATCGATC
39269 CACGGCTTGCGCATCCCA
66 CACGGCTTGCGCATCCCA
*
39287 AAAAATGGCATTGGCACGGGAGAAATAAGAATATGTGCCTAAACCCACCTACAACCCTATCGATC
1 AAAAATGGCATTGGCACGGGAGAAATAAGAAGATGTGCCTAAACCCACCTACAACCCTATCGATC
39352 CACGGCTTGCGCATCCC
66 CACGGCTTGCGCATCCC
39369 GCCTCTCTGG
Statistics
Matches: 79, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
83 79 1.00
ACGTcount: A:0.33, C:0.29, G:0.21, T:0.18
Consensus pattern (83 bp):
AAAAATGGCATTGGCACGGGAGAAATAAGAAGATGTGCCTAAACCCACCTACAACCCTATCGATC
CACGGCTTGCGCATCCCA
Found at i:41077 original size:26 final size:26
Alignment explanation
Indices: 41037--41089 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
41027 GTTGACTTAG
*
41037 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
*
41063 GCATACGGAGCTCATTCCCAGTGTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
41089 G
1 G
41090 ATCGGACCAA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.23, T:0.25
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAGTCTAA
Found at i:41750 original size:898 final size:898
Alignment explanation
Indices: 39447--43648 Score: 5612
Period size: 899 Copynumber: 4.7 Consensus size: 898
39437 GGCGATTGGA
* *
39447 GGGGGTGTGCGCACATGATGTGCGATGGGTGCT-GTACTTGGCCCATATATTGGCCCCCTATCCC
1 GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
*
39511 TGATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTATA-A-GTTTGCTGCCA
66 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT-TACAGGTTTGCTGCCA
*
39574 ATAGCCATTAAAGTGTCTGAAATGGGGACA-TTTTTTCAAATGGTCACAAAATCCTGTACACTTC
130 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTC
*
39638 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC-AAAAATACAAGGATCACATCTACCATGTTT
195 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAAATACAAGGATCACATCTACCAAGTTT
* * * * * *
39702 GGGGCCAAAACTCCTTATGAAAAAA-TTAAAAAAAATCCCAAACTGTAAAAAGTTTCAAAAATCG
260 GGGCCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCG
39766 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTAT
325 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTAT
* * *
39831 GAATTTACAAGCCATAAAAATGGCATTGGCATAGCAAAAATAAGAAGATGTGCCTAAACCCACCT
390 GAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCT
* * **
39896 ACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGTCGACGTAGTGCCCGCCCATCCG
455 ACCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG
* * *
39961 CTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCTAGTCTAAGATCAGATCAGACCGAG
520 CTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAG
** ** * *
40026 GGTTGCGGTAGCAGGATCGGCAGCA-AGCAAGGGGGGACCCGGTCT-ATCCCCGAG-TTACACAT
585 GGTTATGACAGCAGGATCGGCAGCATA-C-AGGGGGGACCC-GACTGATCCCCG-GCTTACGCAT
* *
40088 CCTGCCCCTCTGG-CTGACTGAGCGCACGCACGCTCGTTTTGTGGGTTGACTTAGGCATACAGAG
646 CCTGCCCCTCTGGTC-GACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAG
* * * * *
40152 TTCATTTCCAGTCTAAGCATACAAAGTTCATT-CCAGTGTATGAT-TGAACCGGACCGAGGGTTA
710 TTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTGTAAGATCAG-ACCGGACCGAGGGTTG
* ** *
40215 CGGGTGCACATACTGGGCTCGGGCATGTGCTGGT-CTCGTATTTTTTTTCGCCCGAGGAACCATC
774 CGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGC-CACATTTTTTTTCGCCCGAGGCACCATC
* * * * * * * **
40279 ATCGGAGCATCATCGGAGAACCTGACCGGCGGCATTGGGGATCCAACGATT-GGGGGGCCA
838 ATCGGAGCATCACCGGAGAACCTGACCGACGACATTAGGGTTTCGACGATTGGGGGGGCGG
*
40339 GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCTC
1 GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
*
40404 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA-TTTACAGGTTTGCTGTCAG
66 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
* * *
40468 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGCCACGAAATCCTGTACACTTTG
131 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCG
* * * *
40533 AGTTTGTAGCTGAATTTTTTTGTGCATGCCAA-AAAAACTACAGGGATCACATCTACCAGGTTTG
196 AGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAAATACAAGGATCACATCTACCAAGTTTG
* * * * *
40597 GGCCCAAAACTCCTTTTGAAAGAATTTTAAAAAAATCCTGAACCGTTAAAAGTTTTGAAAATCGT
261 GGCCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGT
*
40662 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCACTGTATG
326 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATG
* * *
40727 AATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGATGATGTGCCTAAACCCGCCTA
391 AATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTA
*
40792 CCACCCTATCGATCCATGGCTTGCGCATCCCACCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGC
456 CCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGC
* * * *
40857 TCGTTTCGTCGGTTGGCTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGT
521 TCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGG
* * * * * * * *
40922 GTTATGGCACCAAGAGCGGCAACACACAGGTGGGGACCCGATTGATCCCTGGCTTACGCATCCTG
586 GTTATGACAGCAGGATCGGCAGCATACAGG-GGGGACCCGACTGATCCCCGGCTTACGCATCCTG
* * *
40987 CCCCTTTGGTCGATTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
650 CCCCTCTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCAT
* * * ** * *
41052 TCCCAGTCTAAGCATACGGAGCTCATTCCCAGTGTAAGATCGGACCAAACTGAGGGTTGTGGGTG
715 TCCCAGTCTAAGCATACAGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTG
* * * * * **
41117 CACATGTTGGGCTCTGGCATGTGCTGGTACAACA-TTTTTTTCGCCCGAGGCACCAT-TTCCAAA
780 CACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTTTTCGCCCGAGGCACCATCAT-CGGA
** * *
41180 GCATCGTCGGAGAACCTGACCGACGACAATGGGGTTTCGACGATTGGGGGGGCGG
844 GCATCACCGGAGAACCTGACCGACGACATTAGGGTTTCGACGATTGGGGGGGCGG
* * * *
41235 GGGGGTATACGCACATGATGTGTGATGGGTGCTGGTACTCGGCCCTTATATTGGCCCTCTATCCC
1 GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
* * *
41300 TCATCAAACCTCAAGAACTCACACCCCCTTATAGAGTATTTGAGATTTTACAGGTTTGCTGCCAG
66 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
* ** * *
41365 TAGCCATTAAAGTGTCTGAAATGGGGACACTCTTTTCAAACAGTCACAAAGTCCTGTACACTTCA
131 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCG
*
41430 AGTTTTTAGCTGAATTATTTTGTGCATGCCAACAAAAAATACAAGGATCACATCTACCAAGTTTG
196 AGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAAATACAAGGATCACATCTACCAAGTTTG
* * * * *
41495 GGGCCAAAACTTCTTCTGAAAAAATTTTAAAAAAATCTCGAACCATAAAACA-TTTCAAAAATCG
261 GGCCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAA-AGTTTTAAAAATCG
** *
41559 CAAAAAATAGAAAACGAGTCGTCTTGCCATTAAACTTCACATGAAGGCTTAAGGGACCATTGTAT
325 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTAT
* * * *
41624 GAATTTACAAGCCATAAAAATGGCATTGGCATGGTAGAAATATGAAGATATGTCGAAACCCACCT
390 GAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCT
** * * * *
41689 ACCACCCTATCGATCCACGGCTTGTTCATCCCATCTCTCGGGCCAACGTAGTGCTCGCCCGCCCG
455 ACCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG
* ** * * * **
41754 CTCGTTTCATCGGTTGGCTTAGGCAGATGGAGTTCATTCCCAGTCTAAGACCAGA-CTGAACTAA
520 CTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGA
* * * * * ** * * *** *
41818 GGGTTGA-AACAGTAGGATC-ACTAGCATGCAGGGAAGGACATGACTGATCCTCGACTCGTGGAT
584 GGGTT-ATGACAGCAGGATCGGC-AGCATACAGGG-GGGACCCGACTGATCCCCGGCTTACGCAT
* * ** * ** * *
41881 CCTGCCCCTCTGATCGACTGAGTGCCCATACCCTAATTTCATGGGTTGACTTACGCATAC-GAAG
646 CCTGCCCCTCTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAG-AG
* * * * * *
41945 TTAATACCTAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGGTGT
710 TTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGC
* ** * *
42010 GGGTGCACATGCTGGGCACGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCCGGGGCACCATCAT
775 GGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTTTTCGCCCGAGGCACCATCAT
* * ** * * * *
42075 CGGAGCATTACCGGAGAACTTGACCGGTGGCATTAGGGTTTCGATGATTGAGGGGGTGG
840 CGGAGCATCACCGGAGAACCTGACCGACGACATTAGGGTTTCGACGATTGGGGGGGCGG
* *
42134 GGGGGTTGTGCGCACATAATGTGCT-ATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATC
1 GGGGG-TGTGCGCACATGATGTG-TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
* *
42198 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCGTTTGAGATTTTACAGGTTTACTGCC
64 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
*
42263 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTATACACTT
129 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTT
* * * *
42328 CGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAA-AAAAACTACAAGGATCACGTCTACCAGGTT
194 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAAATACAAGGATCACATCTACCAAGTT
* * **
42392 TGGGCCCAAAACTCCTTTTAAAAAAATTTTAAAAAAATCTTGAACCGTAAAAAGTTTTAAAAATC
259 TGGGCCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATC
*
42457 GTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAA-TATCACATGAAGGCTTAAGGGACCATTGT
324 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT-TCACATGAAGGCTTAAGGGACCATTGT
* * * *
42521 ATGAAGTTACAACCCATAAAAATGGCATTGGCATGGTAGAATTATGAAGATGTGCCTAAACCCAC
388 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCAC
* *
42586 CTACCACCCTATCGATCCACGGCTTACGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCTCGCC
453 CTACCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCTGGCCGACGTAGTG--C-C-CGCC
* ** * * * *
42651 CGCCTGCTCGTTTTGTCGGTTGCCTTAGGCATACAGAGTTCATTCCCAATCAAAGATCGGCCCAG
514 CGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAG
* * * * *
42716 ACCGAGGGTTGTGACAGCAGGATTGGCACCATGCAGGGGGGACCCGACCGATCCCCGGCTTGA-G
579 ACCGAGGGTTATGACAGCAGGATCGGCAGCATACAGGGGGGACCCGACTGATCCCCGGCTT-ACG
** * *
42780 CATGATGCCCCTCTTGTCGACTGAGCGCCTGCACGCTCGTTTCGT-GGTTGACTTAGGCATACAG
643 CATCCTGCCCCTCTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAG
* ** *
42844 AGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCTAGTGTAAGATCAGATTGGATCGAGGGTT
708 AGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTT
* *
42909 GCGAGTGCACATGCTGGGCTTGGGCATGTGCTGGTGCCACATTTTTTTTCGCCCGAGGCACCATC
773 GCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTTTTCGCCCGAGGCACCATC
* ** * * *
42974 GTCGGAGCATTGCCGGAGAACCTGACCGAC-AGCATTAGAGTTTTGACGATTGGGGTGGC-G
838 ATCGGAGCATCACCGGAGAACCTGACCGACGA-CATTAGGGTTTCGACGATTGGGGGGGCGG
*
43034 GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
1 GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
* *
43099 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTACCAG
66 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
* * * *
43164 TAGCCCTTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCATAAAATCCTGTACACATCG
131 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCG
* * * *
43229 AGTTTTTAGCTGAATTGTTTTATGCATGCCAAC-AAAATTACAAGGATCACGTCTACCAAGTTTG
196 AGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAAATACAAGGATCACATCTACCAAGTTTG
* * * *
43293 GGACCAAAACTCCTTCTCAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCAT
261 GGCCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGT
* *
43358 GAAAAATAAAAAACGAGTCGTCTTGCCATGAAAATTCACATGAAGGCTTAAGGGACCATTGTATG
326 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATG
43423 AATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTA
391 AATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTA
** **
43488 CCACCCTATCGATCCACGGCTTGCGCAT-CCAGCCTCTCTGGTTGGTGTAGTGCCCGCCCGCCCG
456 CCACCCTATCGATCCACGGCTTGCGCATCCCA-CCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG
* * * * * *
43552 CTCGTTTCATCGGTCGGCTTAGTCAGACAGAGTTCATTCCCAGTCTAAGATCGAACCGGACAGAG
520 CTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAG
* * *
43617 GGTTCTG--A-CAGGATCGGTAGCATGCAGGGGGG
585 GGTTATGACAGCAGGATCGGCAGCATACAGGGGGG
43649 GTGTGCGCAC
Statistics
Matches: 2885, Mismatches: 381, Indels: 88
0.86 0.11 0.03
Matches are distributed among these distances:
891 2 0.00
892 56 0.02
893 113 0.04
894 119 0.04
895 529 0.18
896 166 0.06
897 113 0.04
898 488 0.17
899 780 0.27
900 209 0.07
901 177 0.06
902 50 0.02
903 80 0.03
904 3 0.00
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (898 bp):
GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCG
AGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAAATACAAGGATCACATCTACCAAGTTTG
GGCCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGT
GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATG
AATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTA
CCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGC
TCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGG
GTTATGACAGCAGGATCGGCAGCATACAGGGGGGACCCGACTGATCCCCGGCTTACGCATCCTGC
CCCTCTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATT
CCCAGTCTAAGCATACAGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGC
ACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTTTTCGCCCGAGGCACCATCATCGGAGC
ATCACCGGAGAACCTGACCGACGACATTAGGGTTTCGACGATTGGGGGGGCGG
Found at i:41987 original size:26 final size:26
Alignment explanation
Indices: 41935--41987 Score: 61
Period size: 26 Copynumber: 2.0 Consensus size: 26
41925 GTTGACTTAC
*
41935 GCATACGAAGTTAATACCTAGTCTAA
1 GCATACGAAGTTAATACCCAGTCTAA
* * * *
41961 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGAAGTTAATACCCAGTCTAA
41987 G
1 G
41988 ATCAGACCGG
Statistics
Matches: 22, Mismatches: 5, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.21, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTAATACCCAGTCTAA
Found at i:42872 original size:26 final size:26
Alignment explanation
Indices: 42836--42888 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
42826 GTTGACTTAG
42836 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
42862 GCATACAGAGTTCATTCCTAGTGTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
42888 G
1 G
42889 ATCAGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:46127 original size:26 final size:26
Alignment explanation
Indices: 46098--46150 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
46088 GTTGACTTAG
* *
46098 GCATACTGATTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
46124 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
46150 G
1 G
46151 ATCAGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:46297 original size:896 final size:893
Alignment explanation
Indices: 44261--51629 Score: 9102
Period size: 894 Copynumber: 8.2 Consensus size: 893
44251 CGCACATAGC
* * * *
44261 CTGAGCACCCGCACGTTCGTTATCATTGGTTGACTTAGGCATACGGAGTTC-TT-CCAGTCCTAA
1 CTGAGCGCCCGCACGCTCGTT-TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT-CTAA
* * * * *
44324 GCATGACGGAGTTCATTCCCAGTGTAGGATC-G-CCAGACCGAGGGTTAAAGGGTGCACATGCGG
64 GCAT-ACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTT-ACGGGTGCACATGCTG
* * *
44387 GGCTCGGGCAT-TGCTGGTGCGCCATATTTTTTTTTGCCCGGGGCACCATCGTCGGAGCATTCGT
127 GGCTCGGGCATGTGCTGGT--GCCATA-TTTTTTTCGCCCGGGGCACCATCCT-GGAGCA-TCGC
44451 CGGAG-ACCTGACCGACGGCATTGGGGTGTCCGACGCATTGGGGGGGCGCAGGGGCGTGTGCGCA
187 CGGAGAACCTGACCGACGGCATTGGGGT-TCCGACG-ATT-GGGGGGCG--GGGG-GTGTGCGCA
*
44515 CATGATGTGCGATGGGGTGCTCGTACTTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
246 CATGATGTGCGAT-GGGTGCTGGTAC-TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* *
44580 CAAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAA
309 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
44644 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCT
374 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCT
* * *
44709 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCATGTTTGGGACCAAAAATC
439 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
* * ** *
44774 CTTCTGAAAAAATTTTTAAAAAATCCTGAACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
504 CTTCTGAAAAAATTTTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAA
*
44839 ACGAGTCTTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
569 ACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
*
44904 ATAAAAATGGCATTGGTATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
634 ATAAAAATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * *
44969 TCCATGGCTTGCGCATCCCGCCTCTCT-GCCGACGTAGTGCCCGCCCGCCCGCTCGTTTTGTCAG
699 TCCACGGCTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGG
* * * * **
45033 TTGGCTTAGGCATACGGAGCTCATTCCCAGCCTAAGATCAGACCAGACCGAGTGTTGTGGCAGCT
764 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTT-ACGCAGC-
* * * ** * *
45098 A-GATTGGCAGCATGTAGGGGGGGACTCGGTCGATCTCCGGCTTGCGCATCCTGCCCCTCTAGCC
827 AGGATCGGCAGCACGTAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCC
*
45162 AG
892 GG
* * *
45164 CTGAGTGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTACATTCCCAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * * * ** * ** *
45229 ATACAGAGTCCATTCCTAGTGTAGGATCAGACTGGACTGAGGGTTGCATGTGCACATGCTGGCCT
66 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTACGGGTGCACATGCTGGGCT
* * ** * * *
45294 CGGGCATGTGCTAGTGTCGCATTTTTTTTTCGCTTGGGGCACCGTCGTCGGAGCATCACCGGAGA
131 CGGGCATGTGCTGGTG-C-CATATTTTTTTCGCCCGGGGCACCATCCT-GGAGCATCGCCGGAGA
* *
45359 ACCTGACCGGCGACATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCGA
193 ACCTGACCGACGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCGA
* * *
45424 TGGGTGCTGGTACTTGGCCCTTATGTTGGCCCCCTATCCCTCATCAAGCCTTGAGAACTCACACC
258 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
** * *
45489 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGTGATTAAAGTGTCTAAAATGTG
323 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
* * *
45554 GACACTTTTTTTAAATGGTCACAAAATCCTGTACACTTCGAGCTTTTAGCTGAATTTTTTTTTGC
388 GACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * ** * * **
45619 ATGCCAAAAAAAACACAACAATCATGTCTACCAAGTTTGGGGCCAAAACTGCTTCAAAAAAAATT
453 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATT
* * *
45684 TTAAAAAAATCCCGAACCGTACAAAGTTTCAAAAATCATGAAAAATTA-AAAACGAGTTGTCTTG
518 TTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAA-TAGAAAACGAGTCGTCTTG
* *
45748 CCATGAAACTTCACATGAGGGCTTAAGGGACCATTGTATGGATTTACAAGCCATAAAAATGGCAT
582 CCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * *
45813 TGGCATGGTAAAAATATGAAGATGTGCCTAAACCCACCTACCAACCTATCGATCCACGGCTTGCG
647 TGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
45878 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCAT
712 CATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
* * * *
45943 ACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACAGCAGTAGGATTGGTAGCAT
777 ACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTAC-GCAGCAGGATCGGCAGCAC
* * * * * * *
46008 GTAGAGGGGGACCCGTCCTATCCCTGGCATGCGCATCCTACCCCTCTGGCTGG
841 GTAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* * *
46061 CTGAGCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATACTGATTTCATTCCCAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * *
46126 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCAGACCAAGGGTTACCGATGCACATGCTGGGCT
66 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTACGGGTGCACATGCTGGGCT
* * **
46191 CGGGCATGTGCTGGTGCCGTATTTTTTTCCCCCGGGGCACCATCACTGGAGCATCGTTGGAGAAC
131 CGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATC-CTGGAGCATCGCCGGAGAAC
* * * *
46256 CTGACCGACGGCATTGGCGTTTCGACGATTAGGGTGGCGGGGGGTGTGCGCACATGATGTGTGAT
195 CTGACCGACGGCATTGGGGTTCCGACGATT-GGGGGGCGGGGGGTGTGCGCACATGATGTGCGAT
* *
46321 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAGCTCGAGAACTCACAGCC
259 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
* *
46386 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAG-CATTAAAGTGTTTGAAATGGGG
324 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
* * *
46450 ACACTTTTTTCAAATGTTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTTTTTGTGCA
389 ACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * * * * * *
46515 TGCCAACAAAAATAAAAGGATCATGTCCACCACGTTTGGGGCCAAAAATGCTTCTGAAAACATTT
454 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTT
* * * *
46580 TTAAAAAATCCTGAACCATAAAAAGTTTGAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
519 TAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
* * *
46645 ATGAAACTTCACATGAAGGCTTAAGGGGCCATTGTATGAATTTAAAAGCCATAAAAATGGCATTA
584 ATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* *
46710 GCATGGCAGAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTACGC
649 GCATGGCAG-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
*** * ** *
46775 ATCCCGCCTCTCTGGCC-AGCGTAGTGCTATCTCGCCTTCTCGTTTCATCGGTTGGCTTAGGCAT
713 ATCCCGCCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
* * * ** * * * *
46839 ACGGAGTTCATTCCCAGTCTAAGATCGGACTGGATCGAGGGTTGTGGTAGTAGGATCAGCAGCAT
777 ACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTT-ACGCAGCAGGATCGGCAGCAC
* * *
46904 GCA--GGGGGACCTGACCGATCCCCAGCTTGCGCATCCTGCCCCTCTGGCCGG
841 GTAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* * * *
46955 CTGAGCGCCTGTACGCTCATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
** * ** * ** *
47020 ATACCAAGTTCATTCCCAGTGGAAGATTGGACCAGACCGAA-GGTTGTGGGTACACAT-CTTGGG
66 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACC-AAGGGTTACGGGTGCACATGC-TGGG
* * * *** ** * * *
47083 CTCGAGCATGTACAGGTGCTGCAT-TTTTTTTCTTTCGACGCACCATCACCGGAGTATCGCCAGA
129 CTCGGGCATGTGCTGGTGC--CATATTTTTTTCGCCCGGGGCACCATC-CTGGAGCATCGCCGGA
* ** *
47147 GAACCTGACCGGCGGCATTGGGGTTCCGGTGATTAGGGGCGG-AGGGGGTGTGCGCACATGATGT
191 GAACCTGACCGACGGCATTGGGGTTCCGACGATT-GGGG-GGCGGGGGGTGTGCGCACATGATGT
* *
47211 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT-CCTCATCAAAGCTTGAGAAACTC
254 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG-AACTC
* *
47275 ACACCCCTTTAAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCCATTAAAGTGTCTA
318 ACACCCCCTT-AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG-CCATTAAAGTGTCTG
* * *
47340 AAATGGGGACACTTTTTTTCAAATGGTCACAAAATTCTGTACACTTCGAGTTTTTTGGCTGAATG
381 AAATGGGGACAC-TTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAG-TTTTTAGCTGAATT
* * * **
47405 TTTTTGTGCGTGCCAAAAAAAATACAAAGATCACGTCTACCAAGTTTTTGGCCAAAA-TCCTTCT
444 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT
* * *
47469 GAAAAAATTTTAAAAAAATCTCTAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
509 GAAAAAATTTTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
*
47534 ACGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
574 TCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * ** * *
47599 AATGGCATTGGCATGGTAGAAATATGAAGATGTACCTAAACCCGTCTACCACCCTATTGATCCAA
639 AATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * *
47664 GGCTTGCGTATCCCCCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCATTTCTTCGGTTGGC
704 GGCTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGC
* * * * * * * *
47729 TTAGGCAAACGCAGTTGATTCCCAGTCTAAGATCAGATCAGATCGAGGGTTGCAGTAGCAGGATC
769 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTAC-GCAGCAGGATC
* * * * *
47794 GGCAGCATGTAGGGGGGGACCTGACCTATCCCCGGCTTGTGCATCTTGCCCCTCTGGCCGG
833 GGCAGCACGTAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* * *
47855 CTGAGCACCCGAACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * *
47920 TTACGGAGTTCATTTCCAGTGTAACATC-GTACCGGACCAAGGGTTACGGGTGCACATGCTGGGC
66 ATACGGAGTTCATTCCCAGTGTAAGATCAG-ACCGGACCAAGGGTTACGGGTGCACATGCTGGGC
* * * * *
47984 TCGGGCATGTGTTGGTGCAACAT-TTTTTTTCGCCCGGAGCACCATCGTCAGAGCATCATTCC-G
130 TCGGGCATGTGCTGGTGC--CATATTTTTTTCGCCCGGGGCACCATCCT-GGAGCATC--GCCGG
* * *
48047 AGAACCTGACCGGCAGCATTAGGGTTCCGACGATTGGGGGGGCGGGGGGTGTGCGCACATGATGT
190 AGAACCTGACCGACGGCATTGGGGTTCCGACGATT-GGGGGGCGGGGGGTGTGCGCACATGATGT
* *
48112 ACGATTGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
254 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
48177 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAA
319 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
48242 CGGGGACACTTTTTTCTAATGGTCACAAAATCCTGTACACTTCTG-G---TCAGC---A-----T
384 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTC-GAGTTTTTAGCTGAATTTTTT
* *
48295 AGTGCATGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
448 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * * * *
48360 AAATTTTAAAAAAATCTCGAACCGTAGAAAGTTTCAAAAATCATGAAAAATGGAAAACGATTCGT
513 AAATTTTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
* * * ** * * *
48425 GTTGCCTTGAAACTTCACATGAAGGCTTAAGGAAAAATTGTATGAATTTACTAGCCAGAAAAATT
578 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* ** * * * *
48490 GCATTGGCACGAAAAAAATATGTAGATGTGCCTAAACCCACCTACCACCCTATCGATCTATGGCT
643 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * *
48555 TGCGCATCCCGCCTCTCAGGCCGATGTAGTGCCCGCCCACCCACTCGTTTAGTCGGTTGGCTTAG
708 TGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * * * * ****
48620 GCATACGGAGTTCATTCCCAGTCTAAGAT-TGAATCGCACTGAGGGTTGCGACAACAAGATTTTT
773 GCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACCGAGGGTTACG-CAGCAGGATCGGC
* *
48684 AGCACGAAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCAG
836 AGCACGTAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* *
48742 C-GAGCGCCCGCACGCTCG-TTCATAGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * * * * *
48805 ATACGGAGTTCATTCCTAGTGTAAGATCGGACCGAACCGAGGGTTGCAGGTGCACATGATGGGCT
66 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTACGGGTGCACATGCTGGGCT
* * * * *
48870 CGGGCATGTGCTGGT-CTTACATTTTTTTTTCGCTCGGGGCACCATCGCCGGAGCACCGCCGAAG
131 CGGGCATGTGCTGGTGC---CATATTTTTTTCGCCCGGGGCACCATC-CTGGAGCATCGCCGGAG
* * * *
48934 AACCTGACCGATGGCATTGGGG-TCCGGCAATTAGGGGGCGGGGGAGAGGGTGTGCGCACATGAT
192 AACCTGACCGACGGCATTGGGGTTCCGACGATT--GGGG-GGCGG-G-GGGTGTGCGCACATGAT
* * * * * * * *
48998 GTGTGTTGGGCGCTGCTGCTTGGCCCTTATATTGG-CCCCTATCCCCCATTAAACCTTGAGAACT
252 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
49062 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
317 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * *
49127 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTTCACTTAGAGTTCTTAGCTGAATTTTT
382 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
49192 TTGTGCATGCTAACTAAAAA-ACAAGGATCACGTCTACCATGTTTGGGGCCAAAACTCCATCTGA
447 TTGTGCATGCCAAC-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGA
* * * * *
49256 AAAAATTTTAAAAAAATCTCAAACCATAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGGGTC
511 AAAAATTTTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
*
49321 GTCTTGCCATGAAACGTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
576 GTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * * * *
49386 TGGTATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCGCCTACCACCTTATCGATCAACAG
641 TGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
** * * *
49451 CTTGCGCATCTTGCCTCTCTGGCCGACGTAGTGCCCGCCTGCCCGTTCGTTTTGTCGGTTGGCTT
706 CTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
** ** * * *
49516 AGGCATACAAAGTTCATTCCCAGTCTAAGATC-GAACCCAACCAAGGGATACGGCAGTAGGATCG
771 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACCGAGGGTTAC-GCAGCAGGATCG
* * * * * * * *
49580 ACAGCACGTA-AGGGGGACCCGATCGATCCCTGGCTTGCACATCCTGCCCATCTAGTCGG
834 GCAGCACGTAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* * * * *
49639 TTGAGCACCCACGCGCTCGTTTCGTAGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * ***
49704 ATACAGAGTTCATTCCCAGTGTAAGATCAGACCGGATCAAGGGTTACGGGTGCACATGCTATTCT
66 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTACGGGTGCACATGCTGGGCT
* * * * **
49769 CGAGCATGTGCTGGTGTTGCATTTTTTTTTTGCCCGGGGCACCATCGCCAGAGCATCGCCGGAGA
131 CGGGCATGTGCTGGTG--CCATATTTTTTTCGCCCGGGGCACCATC-CTGGAGCATCGCCGGAGA
* * * * *
49834 ACCTGATCGACGGCATTGGGGTTCCTACGATTGCGGGGGCGGGGGAGAGGGTGTGTGTAGATGAT
193 ACCTGACCGACGGCATTGGGGTTCCGACGATTG-GGGGGC---GG-G-GGGTGTGCGCACATGAT
* *
49899 GTGTGATGGGTGCTGATACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
252 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
49964 CACACCCCCTTAAAGAGCATTTGAG----T-----TTTGCTGCCAGTAGCCATTAAAGTGTCTGA
317 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
50020 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTC-ATGTTTTTAGCTGAATTTT
382 AATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGA-GTTTTTAGCTGAATTTT
* * * * *
50084 TTTATGGATGCCAAAAAAAAATACAAGGATCATGTCTACCAAGTGTGGGGCCAAAACT-CTATCT
446 TTTGTGCATGCC-AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT-TCT
*
50148 GAAAAAATTTTAAAAAAATCTCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
509 GAAAAAATTTTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
* *
50213 TCGTCTTGCCATTAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAA
574 TCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* *
50278 AATGGCATTGGCATGGTAGAAATATGAAGATGTGCCTAAACCCACCTACTACCCTATCGATCCAC
639 AATGGCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * * * **
50343 GGCTTGCGTATCTCGCTTCTCTGGCTGGCGTAGTGCTCGCCCGCCCGCTCGTTTTATCGGTTGGC
704 GGCTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGC
* * * * *
50408 TTAGGCATACAGAGTTTATTCCCAGTCTAAGATC-GAACCAGACCTA-GGTTACGATAGCAGGAT
769 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACCGAGGGTTACG-CAGCAGGAT
** * * * * **
50471 CGGCAGCACACAGGGGGGGACCCGACCGATCCTCGGCTTGTGCATCTTGCCCCTCCGATCGG
832 CGGCAGCACGTAGGGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* * * * * * *
50533 CTGAGCGCTCACTCCCTTGTTTCGTGGGTTGACTTAGGCATATGGAGTTAATTCCCAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* ** ** * *
50598 ATACAGAGTTCATTCCCAGTGTAAGATCAGATTGGGTCGAGGGTTACGGGTGCACATGCTAGGCT
66 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTACGGGTGCACATGCTGGGCT
* * * * *
50663 CGGGCAGGTACTGGTGCCGTATTTTTTTCG-CAGAGGGCACCATCGCTGGAGCATCACCGGAGAA
131 CGGGCATGTGCTGGTGCCATATTTTTTTCGCCCG-GGGCACCATC-CTGGAGCATCGCCGGAGAA
* * * * *
50727 CCTGATCGGCAGCATTGGAGTTCCGACGATTGGGGGGCAGGGGGTGTGCGCACATGATGTGCGAT
194 CCTGACCGACGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCGAT
* * *
50792 GGGTGCTGGTACTTGGCCTTTATATTGGCCCCCTATCCCTCATCAAAACTCGAAAACTCACACCC
259 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
* * * *
50857 CCTTAAAGAGCATCTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAATGTGTCTAAAATGGGG
324 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
* * *
50922 ACACTTTTTTCAAATGGTCACAAAATCCTGTACATTTCGAGTTTTTAGCTAAATTTTTTTTTTGC
389 ACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTTGTGC
* * *
50987 ATGCCAACAAAAATACAAGGATCATGTCTA-CAAGTTTGGGGCCAAAACACTTTCTGAAAAAATT
453 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATT
* * ** *
51051 TTAAAAAAATCCTGAGCCATAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGG
518 TTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
*
51116 CATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATT
583 CATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* *
51181 GGCATGGCAGAAATATGAGGATGTGCCTAAACCCACTTACCACCCTATCGATCCACGGCTTGCGC
648 GGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * **
51246 ATCTCGCCTCTTTGGCCGGCGTAGTGCCCGCCCGCCTGCTAATTTCGTCGGTTGGCTTAGGCATA
713 ATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
* * * * * *
51311 CTGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGATAGCAGGATCAGTAGCACG
778 CGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACG-CAGCAGGATCGGCAGCACG
* * * *
51376 CA-GGGGGGACCC-AGCCGATCCCCGGCTTGCGCATCTTACCCCTCTGGCCGA
842 TAGGGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* * * * * * * * *
51427 CTGAGCGTCTGCAAGCTCATTTCATGGCTTGACTTAGGCATACAGATTTCATTCCTAGTCTAAGC
1 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * * * * * * **
51492 ATACGAAGTTCATTCCCAGTTTAAGATCGGACTGGACCAAGGGTTCCAGGCGCACATGTTGGTAT
66 ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTACGGGTGCACATGCTGGGCT
* * * * **
51557 CGGGCATGTGCTGGTGCTGCAT-TTTTCTTTCACTCGGGGCACCATCGTTGGAGCGTCGCCAAAG
131 CGGGCATGTGCTGGTGC--CATATTTT-TTTCGCCCGGGGCACCATC-CTGGAGCATCGCCGGAG
51621 AACCTGACC
192 AACCTGACC
51630 AGCGGTACTT
Statistics
Matches: 5605, Mismatches: 754, Indels: 221
0.85 0.11 0.03
Matches are distributed among these distances:
884 11 0.00
885 139 0.02
886 195 0.03
887 469 0.08
888 46 0.01
890 5 0.00
891 9 0.00
892 67 0.01
893 128 0.02
894 1117 0.20
895 639 0.11
896 771 0.14
897 333 0.06
898 566 0.10
899 386 0.07
900 303 0.05
901 164 0.03
902 133 0.02
903 99 0.02
904 25 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (893 bp):
CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
ATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTACGGGTGCACATGCTGGGCT
CGGGCATGTGCTGGTGCCATATTTTTTTCGCCCGGGGCACCATCCTGGAGCATCGCCGGAGAACC
TGACCGACGGCATTGGGGTTCCGACGATTGGGGGGCGGGGGGTGTGCGCACATGATGTGCGATGG
GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
ACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTA
AAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAT
GAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
ATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
CCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
AGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGCAGCAGGATCGGCAGCACGTAGG
GGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
Found at i:48808 original size:26 final size:26
Alignment explanation
Indices: 48777--48829 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
48767 GTTGACTTAG
48777 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
48803 GCATACGGAGTTCATTCCTAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
48829 G
1 G
48830 ATCGGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:49712 original size:26 final size:26
Alignment explanation
Indices: 49676--49728 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
49666 GTTGACTTAG
*
49676 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
49702 GCATACAGAGTTCATTCCCAGTGTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
49728 G
1 G
49729 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:52064 original size:26 final size:26
Alignment explanation
Indices: 52033--52085 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
52023 GTTGAATTAG
52033 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
52059 GCATACGGAGTTCATTCTCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
52085 G
1 G
52086 ATCGGATCTG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:58687 original size:897 final size:893
Alignment explanation
Indices: 56289--61723 Score: 7302
Period size: 896 Copynumber: 6.1 Consensus size: 893
56279 GTTGACTTAG
* *
56289 GCATACGGAGTTCATTCCCAGTGTAAGATC-GAACCGGACCGAGGGTTCCAGGTGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAG-ACCGGACCGAGGGTTGCGGGTGCACATGCTGG
* * * *
56353 GCTCAGGCATGTGCTTGTGTCGCATTTTTTTTCGCTCGGGGCACCATCCCCGTAGCATCGCTGGA
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGC-CGGGGCACCATCGCCG-AGCATCG-TGGA
* * * **
56418 GAACTTGACCGGCGGTATTGGGGTTATAGCGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTG
127 GAACCTGACCGACGGCATTGGGGTTCCAGCGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTG
* * *
56483 CAATGGATGCTGGTACTTGGCCCTTATATTGGACCCCTATCACTCATCAAACCTCGAGAACTCAC
192 CGATGGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
56548 ACCCCATTAAAGAGCATTTGAGATTTTATAGATTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
257 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
* *
56613 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACATTTCGAGTTTTTAGCTGAATTTTTTTG
322 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
*
56678 TGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
* ** * ** * *
56743 ATTTTTAAAAAATTTCAAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAGAAAATGAGTTGTCT
452 ATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
56808 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
56873 ATTGGCATGGCAGAAATATGAAGATGTGTCTAAACCAACCTACCACCCTATCGATCCACGGCTTA
582 ATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * * *
56938 CGCATCCCACCTCTCTGACCGGTGGAGTGCCCGCCCGCCCTCTCATTTTGTCGGTTGGCTTAGGC
647 CGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGACCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * * * * * * *
57003 GTACGGATTTCATTCCCAGTCTAACATCAAACCAGACCGAGGGCTATGGCAGCAAGATAGGCAGC
712 ATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGC
* * * ** * * *
57068 TCGTAAGGGGGGACTTGACCGATCCCCTGCTTGCCCATCCTGCCCTTCTGG-CGGACTGAGCGCC
777 ACGCAGGGGGGGACCCGACCGAT-CCCGGCTTGCGCATCCTGCCCCTCTGGCCGG-CTGAGCGCC
* * *
57132 CGCACGCTCGTTTCGTGGGTTGACTTAGGCACACAGAGTTCATTCCCAATCTAA
840 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * **
57186 GCATACGGATTTCGTTCCCAATGTAAGATCAGATCGGACCAAGTGTTGTAGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * *
57251 CTCGGGCATGTGCTGGTGCCACACTTTTTTTTCACCTAGGGCACCATCGTCGAAGCATCGTCGGA
66 CTCGGGCATGTGCTGGTGCCGCA-TTTTTTTTCGCC-GGGGCACCATCGCCG-AGCATCGT-GGA
* * * * *
57316 GAACCTGACTGGCGACATTGGGGTTCCAACGATTGGAGGGGCGGGGGGTTGTGCGCACATGATGT
127 GAACCTGACCGACGGCATTGGGGTTCCAGCGATTGGGGGGGCGGGGGG-TGTGCGCACATGATGT
* * * * *
57381 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCCCCCTTCAAACCTTGAGAAGTCA
191 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
57446 CACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTAAAA
256 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
* *
57511 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTTGAGTTTTTAGCTGATTTTTTTT
321 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
57576 GTGCATGCCAACAAAAATAAAATGATCATGTCTACCAAGTTTCGGGCC-AAACTCCTTCTGAAAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
* * * *
57640 AATTTTAAAAAATTCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAA-CGTAAAACGAGTCGT
451 AATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAG-AAAACGAGTCGT
57704 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
515 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
57769 GCATTGGCATGGCAAAAATATGAAGATGTGCCGAAACCCACCTACCACCCTATCGATCCACGGCT
580 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
** * * * * *
57834 TTTGCATCCTGCCTCTCTGACCGGCATAGTGCCCTCCCG-CCTGCTCATTTCGTCGGTTGGCTTA
645 TGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGACC-GCTCGTTTCGTCGGTTGGCTTA
* * * * *
57898 GGCATACGGAGTTCATTCCCAGTTTAAGATTAGATCAGACCGAGGGTTGTGGTAGCAGGATCGGC
709 GGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGC
* * * * *
57963 AGCACGTAGGGGGGGACTCGACCGAACCTCGGCTTGCGCACCCTGCCCCTCTGGCCGGCTAAGCG
774 AGCACGCAGGGGGGGACCCGACCGATCC-CGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCG
* * *
58028 CCCGTACGCTTGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
838 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * **
58084 GCATACGGAGTTCGTTCCCAGTGTAATATCAGAGCGGACCGAGGGTTGTGGGTGCACATGCTATG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * **
58149 CTCGGGCATGTACTGGTGCCGCATTTGTTTTTCGCCCGGAAACCATCGCCAGAGCATCGCTGTGA
66 CTCGGGCATGTGCTGGTGCCGCATTT-TTTTTCGCCGGGGCACCATCGCC-GAGCATCG-TG-GA
* * * * * *
58214 AAACCTGACCGGCGGCATTGGGCTTCCGGCGATTGGGAGGGTGGGGGGTGTGCGCACATGATGTG
127 GAACCTGACCGACGGCATTGGGGTTCCAGCGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTG
* * *
58279 CAATGGGTGCTGGTACTTGGCCTTTATATT-GACCCCATATCCCTCATCAAACCTCAAGAACTCA
192 CGATGGGTGCTGGTACTTGGCCCTTATATTGGACCCC-TATCCCTCATCAAACCTCGAGAACTCA
58343 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
256 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
58408 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
321 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
58473 GTGCATACCAACAAAAATACAAGGATCATGTCTACCAAGTGTGGGGCCAAAAATTCTTCTGAAAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
*
58538 AATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATG-AAAATAGAAAATGAGTCGTC
451 AATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* *
58602 TTGCCATGAAACTTCACAGGAAGGCTTAAGGGACCATTGTATGAATTTATAAGCCATAAAAATGG
516 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
58667 CATTGGCATGGCAGAAATATGAAGATGTGCC-AAACCCACCTACCACCCTATCGATCCACGGCTT
581 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
58731 GCGCATCCCGCCTCTCTGGTCGGCGTAGTGCCCGCCCGAACGCTCGCTTCGTCGGTTGGCTTAGG
646 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGACCGCTCGTTTCGTCGGTTGGCTTAGG
* **** * * *
58796 CATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACTGAGGGTTGCAATAGTAGGATTGGCAC
711 CATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAG
* * * * *
58861 CACACAGGGGGGGACCCGACCGATCCTCGACTTGCGCATCCTACCCCTCTGGCCAGTTGAGCGCC
776 CACGCAGGGGGGGACCCGACCGATCC-CGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
* * *
58926 CGTACGCTCATTTCGTGGGTTGACGTAGGCATACGGAGTTCATTCCCAGTCTAA
840 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
58980 GCATACAGG-GTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGCACATGCTGG
1 GCATAC-GGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGCACATGCTGG
* * * * **
59044 GCTCAGGCATGTGCTGGTGCCGTATTCTTTTTTTCGTTCGGGGCACCATCGTCGGAGCATCACCG
65 GCTCGGGCATGTGCTGGTGCCGCA-T-TTTTTTTCG-CCGGGGCACCATCG-CCGAGCATC-GTG
* * *
59109 GAGAACCTGACCGACAGCAATGGGGTTCCAGCGATTGGGGGGGCAGGGGGTGTGCGCACATGATG
125 GAGAACCTGACCGACGGCATTGGGGTTCCAGCGATTGGGGGGGCGGGGGGTGTGCGCACATGATG
* *
59174 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATCGCTCATCAAACCTTGAGAACTC
190 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATCCCTCATCAAACCTCGAGAACTC
* * * * *
59239 ACACCCCCTTAAAGAGCATATGAGATTTTACAGGTTTGCTGCGAGTAGCCGTTAAAGTGTTTGAA
255 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAA
* * * * *
59304 ATGTGGACATTTTTTTCAATTGGTCATAAAATCCTGTACACTTCGAGTCTTTAGCTGAATTTTTT
320 ATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
59369 TGTGCATGTCAACAAAAATACAAGGATCACATCTACCAAGTGTGGGGCCAAAACTCCTTCTAAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
*
59434 AAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAGAACGAGTCGT
450 AAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
* * *
59499 CTTGGCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTAGGAATTTACAAGCCATAAAAAAG
515 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
59564 GCATTGGCATGACAGAAATATGAAGATGTGCCTAAACCCACCTACCGCCCTATCGACCCACGACT
580 GCATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * **
59629 TGCGCATCCCGCCTCTCTGGTCGGTGTAGTGCCCGCCC-ATCCGCTCGTTTCGTCTATTGGCTTA
645 TGCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGA-CCGCTCGTTTCGTCGGTTGGCTTA
* ** * * * * * * * *
59693 GGCATACGGAATTTGTTCCCAGTCTCAGATCATACCAGACTGAAGGTTGTAGCAGTAGGATCGGT
709 GGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGC
** ** * * ** * * *** *
59758 AGCACAAAGGGGGGGACCCGGTCAATCCCTAGCTTGTACATCTTGCCGCTCTGATTGGCTGAGCA
774 AGCACGCAGGGGGGGACCCGACCGATCCC-GGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCG
* *
59823 CTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
838 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * **
59879 GCATACGGAGTTCATTCCCCGTGTAAGATCGGACCAGACCAAGGTTTATGGGTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
* * * * * * **
59944 CTTGGGCATGTGCTGGTGCAGTATTTTTTTTTC-TCGGGACACCATCGTCGGAGTGTCGTCGGAG
66 CTCGGGCATGTGCTGGTGCCGCA-TTTTTTTTCGCCGGGGCACCATCG-CCGAGCATCGT-GGAG
* *
60008 AACCTGACCGACGGTATTGGGGTTCC-GACGATTGGGGGGGTGGGGGGTGTGCGCACATGATGTG
128 AACCTGACCGACGGCATTGGGGTTCCAG-CGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTG
* * *
60072 CGATGGGTGCTGGTACTTGGCCCTTACATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
192 CGATGGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
60137 ACCCCCTTAAAGAGCAGTTGAGATTTTACAAGTTTGCTGGCAGTAGCCATTAAAGTGTCTGAAAT
257 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
* * *
60202 GGGGACAATTTTTTCAAATGGTCACAAAATCCTGTACACTTAGAGTTTTTAGCTGAATTTTTTTA
322 GGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
*
60267 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGCTTGGGGCCAAAACTCCTTCTGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
* * *
60332 ATTTTAAAAAAATCTCGAACCGTAAAAAGTTTTC-AAAATCATGAAAAATAGAAAATGAGTCGGC
452 ATTTTAAAAAAATCCCGAACCGTAAAAAG-TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
*
60396 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGG
516 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*
60461 CATTGGCAAGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
581 CATTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * *
60526 GCGCATCTCGCCTCTCTGGCCGGCGTAGTGCCCACCCGTCCGCTCGTTTTGTCGGTTGGCTTAGG
646 GCGCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGACCGCTCGTTTCGTCGGTTGGCTTAGG
* * ** ** * * * **
60591 CATACGGAGTTCATTACTAATCTAAGATTGGATTAGACTGAGGGTTGCGGCAGTAGGATCGATAG
711 CATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAG
* * * *
60656 CATGCAGGGGGGGACCCGACCGATCCCTGGCTTGCGCATCATGCCCCTCTGGCCGACTGAGTGCC
776 CACGCAGGGGGGGACCCGACCGATCCC-GGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCC
* *
60721 CGCACGCTCGTTTCGTCGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAA
840 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** * * *
60775 GCATAC-CAGGTTAATTCCCAGTGTAAGATTGGACCAGACCGAGGGTTACGGGTGCACATGCTTG
1 GCATACGGA-GTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGCACATGCTGG
*
60839 GCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCACTCGGGGCACCATCG-C---CA-----GAGA
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGC-CGGGGCACCATCGCCGAGCATCGTGGAGA
* * * * * *
60895 ACCTGACCGACAGCATTAGGGTTCCGGCGATTGGGGGGGTAGAGGGGTGTGTGCACATGATGTGC
129 ACCTGACCGACGGCATTGGGGTTCCAGCGATTGGGGGGG-CGGGGGGTGTGCGCACATGATGTGC
* * *
60960 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCTCAAGAACTCACA
193 GATGGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATCCCTCATCAAACCTCGAGAACTCACA
* **
61025 CCCCCTTAAAGAGCATTTGAGATTTTATATATTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATG
258 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATG
* * *
61090 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTCTTAGCTGAATTTTTTTGT
323 GGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
61155 GGATGCCAAAAAAAATACAATGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
388 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
* * ** ** *
61220 TTTTAAAAAAATCTCAAACCGTAAAAAGTTTTGAAAATTGTGAAAAATAGAAAACGAGTCGACTT
453 TTTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
61285 GCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
518 GCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
61350 TTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTA-CACCCTATAGATCCACAGCTTGC
583 TTGGCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * ** * * *
61414 GCATCCCACCTCTTTGGCCGATGTAGTGCCCGCCCGCCCGCTTGTTTTGTCGGTTGGCTTAGGCA
648 GCATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGACCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * * *
61479 TACGGAGTTTATTCCCAATCTAAGATCAGACTAGACCAAGGGTTGTGGTAGCAGGATTGACAGCA
713 TACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCA
* * * * *
61544 CGCAAGGGGGGACCCGACCGATCCCCGACTTGTGCATCCTGCCCTTCTGGCCGGCTGAGCACCCG
778 CGCAGGGGGGGACCCGACCGAT-CCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCG
61609 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
842 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
61661 GCATATGAAGTTCATTCCCAGTGTAAGA-CTGGACCGGATCGATGGTTGCGGGTGCACATGCTG
1 GCATACGGAGTTCATTCCCAGTGTAAGATC-AGACCGGACCGAGGGTTGCGGGTGCACATGCTG
61724 CCAGTAGCCA
Statistics
Matches: 4021, Mismatches: 475, Indels: 95
0.88 0.10 0.02
Matches are distributed among these distances:
886 324 0.08
887 426 0.11
895 11 0.00
896 1100 0.27
897 806 0.20
898 800 0.20
899 554 0.14
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (893 bp):
GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCGAGGGTTGCGGGTGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCCGGGGCACCATCGCCGAGCATCGTGGAGAAC
CTGACCGACGGCATTGGGGTTCCAGCGATTGGGGGGGCGGGGGGTGTGCGCACATGATGTGCGAT
GGGTGCTGGTACTTGGCCCTTATATTGGACCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGG
ACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTT
TAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
ATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
GCATGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
TCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGACCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
GGAGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGC
AGGGGGGGACCCGACCGATCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACG
CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:58983 original size:26 final size:26
Alignment explanation
Indices: 58954--59006 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
58944 GTTGACGTAG
58954 GCATAC-GGAGTTCATTCCCAGTCTAA
1 GCATACAGG-GTTCATTCCCAGTCTAA
*
58980 GCATACAGGGTTCATTCCCAGTGTAA
1 GCATACAGGGTTCATTCCCAGTCTAA
59006 G
1 G
59007 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACAGGGTTCATTCCCAGTCTAA
Found at i:63303 original size:26 final size:26
Alignment explanation
Indices: 63267--63319 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
63257 GTTGGCTTAG
63267 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
63293 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
63319 G
1 G
63320 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:63730 original size:288 final size:288
Alignment explanation
Indices: 63187--63757 Score: 860
Period size: 288 Copynumber: 2.0 Consensus size: 288
63177 GCAGGGGGGG
* * *
63187 ACCCGACCGATCCCTGGCTTGCGCATCCTACCCCTCTGGTCGGCTAAGTGCCCCCACGCTCATTT
1 ACCCGACCGATCCCTGGCTTACGCATCCTACCCCTCTGGCCGGCTAAGCGCCCCCACGCTCATTT
* * *
63252 TATGGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGT
66 CATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAAACGGAGTTCATTCCCAGTGT
* *
63317 AAGATCAGACCGGACCAAGGGTTGCTGGTGCACATGCTGGGCTCAGGCATGTGCTGGAGCCATAT
131 AAGATCAGACCAGACCAAGGGTTGCTGGTGCACATGCTAGGCTCAGGCATGTGCTGGAGCCATAT
*
63382 TTTTTTTGCCCGGGCCACCATCGTCAGAGCATCACCGGAGAACCTAACCGGTGACATTGGGCTTC
196 TTTTTTTGCCCGGGCCACCATCGTCAGAGCATCACCGGAGAACCTAACCGGCGACATTGGGCTTC
*
63447 CAATAATTGGGGGGTGAGGGGGGTATTC
261 CAATAATTGAGGGGTGAGGGGGGTATTC
* * * * * *
63475 ACCCGATCGAT-CCTCGGCTTACGGATCCTACCCCTCTGGCCGGCTATGCGCCCTCATGCTCGTT
1 ACCCGACCGATCCCT-GGCTTACGCATCCTACCCCTCTGGCCGGCTAAGCGCCCCCACGCTCATT
*
63539 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAAACGGAGTTCATTCCCAGTG
65 TCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAAACGGAGTTCATTCCCAGTG
*
63604 TAAGATCAGACCAGACCGAGGGTTGCTGGTGCACATGCTAGGCTC-GAGCATGTGCTGGAGCCAT
130 TAAGATCAGACCAGACCAAGGGTTGCTGGTGCACATGCTAGGCTCAG-GCATGTGCTGGAGCCAT
* * ** * *
63668 ATTTTTTTTGCCTGGGCCACTATCGTC-GAAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGC
194 ATTTTTTTTGCCCGGGCCACCATCGTCAG-AGCATCACCGGAGAACCTAACCGGCGACATTGGGC
**
63732 TTCCGGTAATTGAGGGGTGAGGGGGG
258 TTCCAATAATTGAGGGGTGAGGGGGG
63758 GTGTGCACAC
Statistics
Matches: 254, Mismatches: 26, Indels: 6
0.89 0.09 0.02
Matches are distributed among these distances:
287 5 0.02
288 249 0.98
ACGTcount: A:0.19, C:0.27, G:0.29, T:0.25
Consensus pattern (288 bp):
ACCCGACCGATCCCTGGCTTACGCATCCTACCCCTCTGGCCGGCTAAGCGCCCCCACGCTCATTT
CATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAAACGGAGTTCATTCCCAGTGT
AAGATCAGACCAGACCAAGGGTTGCTGGTGCACATGCTAGGCTCAGGCATGTGCTGGAGCCATAT
TTTTTTTGCCCGGGCCACCATCGTCAGAGCATCACCGGAGAACCTAACCGGCGACATTGGGCTTC
CAATAATTGAGGGGTGAGGGGGGTATTC
Found at i:64479 original size:26 final size:26
Alignment explanation
Indices: 64449--64501 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
64439 GTTGACTTAG
64449 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
* *
64475 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
64501 G
1 G
64502 ACCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:66047 original size:26 final size:26
Alignment explanation
Indices: 65995--66047 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
65985 GTTGACTTAG
*
65995 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
66021 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
66047 G
1 G
66048 ATTGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:66425 original size:893 final size:885
Alignment explanation
Indices: 64533--66541 Score: 2825
Period size: 886 Copynumber: 2.3 Consensus size: 885
64523 TGGGTGCACA
* *
64533 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAAACTTTTTTCAAATGGTCAAAAAATCTTG
1 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* *
64598 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTAA
66 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* *
64663 CATGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCATAAAAAGTTTCA
131 CAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCA
* **
64728 AAAATTGTGAAAAGTAGAAAATGAGTAATCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACC
196 AAAATTGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACC
*
64793 ATTGTATGAATTTACAAGCCATAAAAATGGCATCGGCATGGCAGAAATATGAATATGTGCATAAA
261 ATTGTATGAATTTACAAGCCATAAAAATGGCATCGGCATGGCAGAAATATGAAGATGTGCATAAA
** ** * *
64858 CCCACCTACCACGTTATCGATCCATGCTTGCGCATCCTGCCTCTTTGGCCGACGTAGTGCCCGCC
326 CCCACCTACCACCCTATCGATCCATGCTTGCGCATCCCACCTCTCTGGCCGACGTAATGCCCGCC
* * *
64923 CGCCCGCTCGTTTCATCGGTTGGCTTACGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGG
391 CGCCCGCTCGTTTCATCGATTGGCTTACGCATACAGAGTTCATTCCTAGTCTAAGATCAAACCGG
* * * * * * **
64988 ACTGAGGGTTATGGCAGCAGGTTTAGCCACACGCAGGGGGGACCCGACCGATCCCTTGCTTCTGA
456 ACCGAAGGTTATGGCAGCAGGTATAGCCACACACAGCGGGGA-CCGACCAATCCCCGGCTTCTGA
* *
65053 TCCTGCCCCTCTGGCCTGCTGAACGCTCGCTTCGTGGGTTGACTTAGTCATACGAAGTTTATTCC
520 TCCTGCCCCTCTGGCCTGCTGAACGCTCGCTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCC
* ** **
65118 CAGTCTAAGCATACAGAGTTCATTCCCAGCGTAAGATCGGACCGGATTGAGGGTTGTGGGTGCAC
585 CAGTCTAAGCATACAGAGTTCATTCCCAGCGTAAGATCGGACCAGACCGAGGGTTGCAGGTGCAC
* * *
65183 ATACTGGGCTCGGGCATGTGCTAGTGCCGCATTTTTTTTCACCCAGGGCACCATCACTGAAGCAT
650 ATACTGGGCTCAGGCATGTCCTAGTGCCGCATTTTTTTTCACCCAGGGCACCATCACCGAAGCAT
* * * *
65248 CATTAGAGAACCTGACCGACGGCATTGGGGTTCCGATGATTGGGGGGCAGGGAGGGTGTGAGCAC
715 CATCAGAGAACCTCACCGACGGCATTGGGATTCCGACGATTGGGGGGCAGGGAGGGTGTGAGCAC
65313 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
780 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
*
65378 GAATGCACACCCCCTTAAAAATCATTTGAGATTTACAGGTT
845 GAATGCACACCCCCTTAAAAAGCATTTGAGATTTACAGGTT
* * * *
65419 TGCTGCCAGTAGCAATTAAAGTGTCTGAAATTGGAACACTTTTTTCAAATGGTCACAAAATCTAG
1 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * *
65484 TACACTACGAGTTTTTTAGTTGAATTTTTTT-TGCATGCCAACAAAAATACAAGGATAACGTCTA
66 TACACTTCGAG-TTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
*
65548 CCAAGTTTGGGGCCAAAACTCCTTTCTGAAAAAATTTTTAAAAAATCCCGAACCGT-AAAAGTTT
130 CCAAGTTTGGGGCCAAAACTCC-TTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTT
** ** *
65612 TGAAAATCATTAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA
194 CAAAAATTGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA
* * * *
65677 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCGTGGTAGAAATATGAAGATGTGCCTA
259 CCATTGTATGAATTTACAAGCCATAAAAATGGCATCGGCATGGCAGAAATATGAAGATGTGCATA
* *
65742 AACTCACCTACCACCCTATCGATCTACA-GCTTGCGCATCCCACCTCTCTGGCCGACGTAATGCT
324 AACCCACCTACCACCCTATCGATC--CATGCTTGCGCATCCCACCTCTCTGGCCGACGTAATGCC
* *
65806 CGCTCGCCCGCTCGTTTCATCGATTGGCTTAGGCATACAGAGTTCATTCCTAGTCTAAGATCAAA
387 CGCCCGCCCGCTCGTTTCATCGATTGGCTTACGCATACAGAGTTCATTCCTAGTCTAAGATCAAA
* * * * *
65871 CTGGACCGAAGGTTGTGGCAGCAGG-ATCGGCAGCACACATCGGGG-CCGAACCAATCCCCGGCT
452 CCGGACCGAAGGTTATGGCAGCAGGTATAGCCA-CACACAGCGGGGACCG-ACCAATCCCCGGCT
* * *
65934 TGTGCATCCTGCCCCTCTGGCCTGCTGAGCTCCTGCATGTTCGTTTCGTGGGTTGACTTAGGCAT
515 TCTG-ATCCTGCCCCTCTGGCCTGCTGA---AC-GC----TCGCTTCGTGGGTTGACTTAGGCAT
* * * * *
65999 ACGGAGTTCATTCCCATTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATTGGACCAGACCGAG
571 ACGAAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGCGTAAGATCGGACCAGACCGAG
* ** * *
66064 GGTTGCAGGTGCACATGCTTTGCTCAGGCATGTCCTGGTGCCGCA-TTTTTTTCGCCCAGGGCAC
636 GGTTGCAGGTGCACATACTGGGCTCAGGCATGTCCTAGTGCCGCATTTTTTTTCACCCAGGGCAC
* * * * *
66128 CATCGTCCG-AGCATCATCGGAGAACCTCACCGGCGTCATTGGGATTCCGGCGATTGGGGGGC-G
701 CATC-ACCGAAGCATCATCAGAGAACCTCACCGACGGCATTGGGATTCCGACGATTGGGGGGCAG
* * *
66191 GGGGGGTGTGTGCACATGATGTGCGATGGGTG-TAGGTACTTGGCTCTTATATTGGCCCCCTATC
765 GGAGGGTGTGAGCACATGATGTGCGATGGGTGCT-GGTACTTGGCCCTTATATTGGCCCCCTATC
* *
66255 CCTCATCAAACCTCGAGAACT-CACACCCCCTTAAAGAGCATTTGAGGTTTTACAGGTT
829 CCTCATCAAACCTCGAGAA-TGCACACCCCCTTAAAAAGCATTTGA-GATTTACAGGTT
* *
66313 TGTTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACA-TTTTTTCAAATGGTCACAAAATCTTG
1 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* *
66377 TATACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACCTCTAC
66 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* * * * * *
66442 CAAGTTTGGGGCCAAAACTCATTCCGGAAAAATTTTAAAAAAATCCCAAATCGTAAAAAGTTTCC
131 CAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCA
* * *
66507 AAAATTGTGAAAAATATAATACGAGTCGTCTTGCC
196 AAAATTGTGAAAAATAGAAAATGAGTCGTCTTGCC
66542 TGATTTTTTC
Statistics
Matches: 986, Mismatches: 116, Indels: 35
0.87 0.10 0.03
Matches are distributed among these distances:
885 3 0.00
886 284 0.29
887 193 0.20
888 2 0.00
890 1 0.00
891 2 0.00
892 47 0.05
893 224 0.23
894 112 0.11
895 118 0.12
ACGTcount: A:0.27, C:0.23, G:0.22, T:0.27
Consensus pattern (885 bp):
TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
CAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTCA
AAAATTGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACC
ATTGTATGAATTTACAAGCCATAAAAATGGCATCGGCATGGCAGAAATATGAAGATGTGCATAAA
CCCACCTACCACCCTATCGATCCATGCTTGCGCATCCCACCTCTCTGGCCGACGTAATGCCCGCC
CGCCCGCTCGTTTCATCGATTGGCTTACGCATACAGAGTTCATTCCTAGTCTAAGATCAAACCGG
ACCGAAGGTTATGGCAGCAGGTATAGCCACACACAGCGGGGACCGACCAATCCCCGGCTTCTGAT
CCTGCCCCTCTGGCCTGCTGAACGCTCGCTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCC
AGTCTAAGCATACAGAGTTCATTCCCAGCGTAAGATCGGACCAGACCGAGGGTTGCAGGTGCACA
TACTGGGCTCAGGCATGTCCTAGTGCCGCATTTTTTTTCACCCAGGGCACCATCACCGAAGCATC
ATCAGAGAACCTCACCGACGGCATTGGGATTCCGACGATTGGGGGGCAGGGAGGGTGTGAGCACA
TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
AATGCACACCCCCTTAAAAAGCATTTGAGATTTACAGGTT
Found at i:68319 original size:701 final size:698
Alignment explanation
Indices: 66545--68455 Score: 2672
Period size: 701 Copynumber: 2.7 Consensus size: 698
66535 TCTTGCCTGA
* * * * * * * *
66545 TTTTTTCGCCCAGGGCACCATCGTCGAAGAACCTGATCGACGGCAATCGGGTTTCGGCAAATGGG
1 TTTTTTCGCCTAGGGCACCATCGCCAAAGAACCTGACCGACGGC-ATTGGGTTCCAGCGAATGGG
* * *
66610 GGGC-GGGGGGTGTACGCAAATGATGTGCGATGGGTGCTGGTACTTGGCCCTTGTATTGGTCCCC
65 GGGCGGGGGGGTGTGCGCAAATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* * * * *
66674 TATCCCTTATCAAACC-TCGAACTCAC-CCCCCTTAAGGAGGCATTTGAGATTTTATAGGTTTGC
130 TATCCCTCATCAAACCTTAGAACTCACACCCCCTTAA-AAAGCATTTGAGATTTTACAGGTTTGC
*
66737 TTG-CAGTAGCCATTAAAGTGTCTGAAATGCCGGACACTTTTTTCAAATGGTCACAAAATCCTAT
194 -TGCCAGTAGCCATTAAAGTGTCTGAAATG-GGGACACTTTTTTCAAATGGTCACAAAATCCTAT
*
66801 ACACTTCGAGTTTTTAGCTGAATGTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACC
257 ACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACC
* * * *
66866 AAGTTTGGTGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCA-AAACCGTAAAAAGTGTCAA
322 AAGTTTGG-GGCAAAACTCCTTCTGAAAAAATTTAAAAAAAT-CATGAACCGTAAAAAGTTTCAA
* * *
66930 AAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAATCTTCACATGAAGGCTTAAGGGTCCA
385 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCA
* * *
66995 TTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCACAGCAAAAATATGAAGATGTGCCTAAAC
450 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATAGCAAAAATAAGAAGATGTGCCTAAAC
* * *** *
67060 CCACCTACCACCCTATTGATCCACGGCTTGCGCATCCCGCCTCTCTGGCAGGCGTAGTGCCCGCC
515 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCCAACAGACGTAGTGCCCGCC
* * * *
67125 CGCTCGCTCGTTTCGTTGGTTGGCTTAGGTATACGGAGTTCATTCCCAGTGTAAGATTGGACCGA
580 CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGA
* *
67190 ACCGAGGGTTGTGAGTGCACATGTTGGGCTCGAGCATGTGCTGGTGCTGTATTG
645 ACCGAGGGTTGTGAGTGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTG
* * * *
67244 TTTTTTCG-TTCGGGCATCATCGCCGGAGCATCATCAGAGAACTTGACC-AGCGGCATTGGGTTC
1 TTTTTTCGCCTAGGGCACCAT---C---GC--CA--A-AGAACCTGACCGA-CGGCATTGGGTTC
* * * *
67307 CAGCGATTGGGGGGGCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTTGCCCTT
54 CAGCGAAT-GGGGGGCGGGGGGGTGTGCGCAAATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
* * * *
67372 ATATTGGCCCCCTATCCCTCATCAAGCCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATG
118 ATATTGGCCCCCTATCCCTCATCAAACCT-TAGAACTCACACCCCCTTAAAAAGCATTTGAGATT
* * *
67437 TTACAAGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGACAC
182 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
* * * * * *
67502 AAAATCCTATACACTTCAAGTTTTTAGCTGAATTTTTTTGTACACGTCAATAAAAA-ACAAGGAT
247 AAAATCCTATACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGAT
* *
67566 CACGTCTACCAAGTTTGGGGCTAAAACTCCTTCTAAAAAAATTTAAAAAAAAATCATGAACTGTA
312 CACGTCTACCAAGTTTGGGGC-AAAACTCCTTCTGAAAAAATTT--AAAAAAATCATGAACCGTA
* *
67631 AACAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGC
374 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGC
* * * *
67696 GTAAGGGACCATTGTATGAATTTACAATCCATAAAAATCGCATTGGCATGGCAAAAATAAGAAGA
439 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATAGCAAAAATAAGAAGA
* * *
67761 TGTTCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTATCCCACCTCTCCAACCGACG
504 TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCCAACAGACG
**
67826 TAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATGTGGAGTTCATT-CCAGTGTAA
569 TAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTGTAA
* * *
67890 GATCGGACTGGACCGAGGGTTGTGGGTGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATT-
634 GATCGGACCGAACCGAGGGTTGTGAGTGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTG
* *
67954 TTTTTTCGCCTGGGGCACCATCGCCAAAGAACCTGACCGACGGCATTGGGGTTCCTGCGAATGGG
1 TTTTTTCGCCTAGGGCACCATCGCCAAAGAACCTGACCGACGGCATT-GGGTTCCAGCGAATGGG
68019 GGGCGGGGGGGTGGTGCGCAAATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
65 GGGCGGGGGGGT-GTGCGCAAATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
68084 CTATCCCTCATCAAACCTTGAGAACTCACACCCACTTAAAAATCATTTGAGATTTTACAGGTTTG
129 CTATCCCTCATCAAACCTT-AGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTG
68149 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTATA
193 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTATA
* * *
68214 CACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACATCTACAA
258 CACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCA
* *
68279 AGTTTGGGGACAAAACTCCTTCCGAAAAAATGTTAAAAAAATCCTGAACCGTAAAAAGTTTCAAA
323 AGTTTGGGG-CAAAACTCCTTCTGAAAAAAT-TTAAAAAAATCATGAACCGTAAAAAGTTTCAAA
* * * * *
68344 AATCGTGAAAAATAGAAAACGATTTGTCTTGCCATGAAACTTCACAAGAAGGCTTAAAGGACCAT
386 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCAT
*
68409 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATAGCAGAAATA
451 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATAGCAAAAATA
68456 TGAATTTACA
Statistics
Matches: 1063, Mismatches: 119, Indels: 58
0.86 0.10 0.05
Matches are distributed among these distances:
698 8 0.01
699 8 0.01
700 32 0.03
701 352 0.33
702 44 0.04
703 5 0.00
704 1 0.00
705 2 0.00
706 1 0.00
708 15 0.01
709 22 0.02
710 123 0.12
711 151 0.14
712 290 0.27
713 9 0.01
ACGTcount: A:0.29, C:0.22, G:0.22, T:0.27
Consensus pattern (698 bp):
TTTTTTCGCCTAGGGCACCATCGCCAAAGAACCTGACCGACGGCATTGGGTTCCAGCGAATGGGG
GGCGGGGGGGTGTGCGCAAATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
ATCCCTCATCAAACCTTAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTG
CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTATACAC
TTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
TTGGGGCAAAACTCCTTCTGAAAAAATTTAAAAAAATCATGAACCGTAAAAAGTTTCAAAAATCA
TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTAT
GAATTTACAAGCCATAAAAATGGCATTGGCATAGCAAAAATAAGAAGATGTGCCTAAACCCACCT
ACCACCCTATCGATCCACGGCTTGCGCATCCCACCTCTCCAACAGACGTAGTGCCCGCCCGCCCG
CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGAACCGAG
GGTTGTGAGTGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTG
Found at i:68723 original size:26 final size:26
Alignment explanation
Indices: 68687--68755 Score: 120
Period size: 26 Copynumber: 2.7 Consensus size: 26
68677 GTTGACTTAG
*
68687 GCATACGGAGTTCATTCCAAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
*
68713 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
68739 GCATACAGAGTTCATTC
1 GCATACAGAGTTCATTC
68756 ACAGTGTAAG
Statistics
Matches: 41, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
26 41 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCAAGTCTAA
Found at i:68760 original size:26 final size:25
Alignment explanation
Indices: 68687--68765 Score: 113
Period size: 26 Copynumber: 3.0 Consensus size: 25
68677 GTTGACTTAG
*
68687 GCATACGGAGTTCATTCCAAGTCTAA
1 GCATACAGAGTTCATTCC-AGTCTAA
68713 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATT-CCAGTCTAA
*
68739 GCATACAGAGTTCATTCACAGTGTAA
1 GCATACAGAGTTCATTC-CAGTCTAA
68765 G
1 G
68766 ATCGGATAGG
Statistics
Matches: 49, Mismatches: 2, Indels: 4
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.02
26 46 0.94
27 2 0.04
ACGTcount: A:0.32, C:0.23, G:0.19, T:0.27
Consensus pattern (25 bp):
GCATACAGAGTTCATTCCAGTCTAA
Found at i:69633 original size:26 final size:26
Alignment explanation
Indices: 69596--69648 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
69586 GTTGACTTAG
*
69596 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
69622 GCATACGAAGTTCATTCCCAGTGTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
69648 G
1 G
69649 ATTGAACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:69935 original size:880 final size:889
Alignment explanation
Indices: 68713--71197 Score: 3382
Period size: 880 Copynumber: 2.8 Consensus size: 889
68703 CCAAGTCTAA
* * * * *
68713 GCATACAGAGTTCATTCCCAGTCTAAGCATAC-AGAGTTCATTCACAGTGTAAGATCGGA-TAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGA-AGTTCATTCCCAGTGTAAGATTGAACCA-G
* * * *
68776 ACCGAGGGTTGTGGGTGCACATGCTGGGCTCAGGCTTGTGCTGGTGCCGTATTTTTTATTTGCCC
64 A-CGAGGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCTGTATTTTTT-TTCGCTC
* ** *
68841 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCA-GCAGCATTGGGGTTTTGACGATTGG
127 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACGACG-A-CATTGCAGTTTTGGCGATTGG
* * * *
68905 CGGGGGTCGGGGGGTGTGCACACATGATGTGGGGTGGGTGCTGGTACTTGGCCCTTATATTGGCC
190 -GGTGG-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* *
68970 CCCTATGCCTCAAT-AAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGT
253 CCCTATCCCTC-ATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
* * **
69034 TTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTCTCAACTGGTCACAAAATGTT
317 TTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCAT
* * *
69099 GTACACTTTGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
382 GTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTA
* *
69164 CCAAGTTTGGGGCCAAAACT-CTTTTGAAAAAATTTTAGAAAAATCCTGAACCGT-AAAAGTTTC
447 CCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTA-AAAAATCC-AAACCGTAAAAAGTTTC
*
69227 AAAAATCATGAAAAATAGAAAA-GAGTCGTCTTGCCATGAAACTTCACACGAAGGCTTAAGGGAC
510 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGAC
69291 CATTGTAT-AATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAA
575 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAA
* * * *
69355 ACCCACCTACCATCCTATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGCTGGCATAGTGCCCG
640 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * ** *
69420 CCCGCCGCCCGTTTGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG
705 CCCGCCACCCGCTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAG
* * **
69485 ATCGGATCGA-G-G-GT-C-G-TGGC-T-CGTA-GGGGGGACCCGATCGATCCCCGGCTTGGGCA
770 ATCAGATCGAGGTGAGTACAGATGGCATACGGAGGGGGGGACCCGATCGATCCCCGGCTTACGCA
* *
69541 TCCTGCCCCTCTGGTTGGCTAAGCGCCCGCACACTCTTTTCGTGGGTTGACTTAG
835 TCCTGCCCCTCTGGCTGGCTAAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAG
69596 GCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTGTAAGATTGAACCAGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTGTAAGATTGAACCAGAC
* * * * *
69661 AGAGGGTTGCGGGTGCACATGCTAGGCTCTGGCATGTGTTGGTGCTGCATTTTTTTTCGCTC-GG
66 -GAGGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCTGTATTTTTTTTCGCTCGGG
* ** * *
69725 GCACCATCGTCGGTGCATCGTCAGAGAACCTGATCGACGACATTGCAGTTTCGGCGATTGGGGTG
130 GCACCATCGTCGGAGCATCACCGGAGAACCTGA-CGACGACATTGCAGTTTTGGCGATTGGGGTG
69790 GCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
194 GC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* ***
69855 TCCCTCATCAAACCTCTAGAACTCACACCTGTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
258 TCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
*
69920 CCAGTAGCCATTAAAGTGTCTAAAATTGGGACACTTTTTTCAAATGGTCACAAAATCATGTACAC
323 CCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTACAC
* * *
69985 TTCGAGTTTTTAGCTGAATTTTTTTTTGCATGCCAAAAAAAATATAAGGATCACGTCTACCAAGT
388 TTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
* ** * * *
70050 TTGGGGCCAAAAATCCTTCCAAAAAAATTTTTAAAAAATCCCAACCGTAAAAAGTTTAAAAAATT
453 TTGGGGCCAAAACTCCTTCTGAAAAAA-TTTTAAAAAATCCAAACCGTAAAAAGTTTCAAAAATC
* *
70115 ATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGGCCATTGTA
517 ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTA
* * *
70180 TGAATTTACAAGCCAT-AAAATGGCATTGGCATGGCAGAACTATGAAGATGTTCCTAAACCCACC
582 TGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCACC
* * * *
70244 TACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGACGCAGTGCCCG--C-CAA
647 TACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCA
* * * *
70306 CCCGCTCATTTCGTCGGTTGGCTTAGGCGTACGGAGTTCGTTCCTAGACTAAGATCAGATCAGAT
712 CCCGCTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAGATCAGAT
*
70371 CGAGGGTTAGAGTAGCAGGATTGGCATCACGGAGGGGGGGATCCGATCGATCCCCGGCTTACGCA
777 CGA-GG-T-GAGTA-CA-GA-TGGCAT-ACGGAGGGGGGGACCCGATCGATCCCCGGCTTACGCA
* *
70436 TCCTGCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
835 TCCTGCCCCTCTGGCTGGCTAAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAG
* * *
70491 GCATACAGG-GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGA-TCAGACCAG
1 GCATAC-GGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTGTAAGATTGA-ACCAG
* * *
70554 ATCGAGGGGTTGTGGGTACACATGTTGGGATCAGGCATGTGCTGGTGCCT-TATTTTTTTTCGCT
64 A-CGA-GGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTG-CTGTATTTTTTTTCGCT
* ** * *
70618 CGGGGCACCATCGGCAAAGCATCACCGGAGAACCTGACCGGCGACATTACAGTTTTGGCGA-T--
126 CGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGA-CGACGACATTGCAGTTTTGGCGATTGG
** *
70680 --T---GGGGGGTGTGCGCACATGATGTATGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCC
190 GGTGGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* * *
70740 CTATCTCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAAATTTTACAGGTTTG
255 CTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
* * * *
70805 CTGCCAGTAGCCATTAAAATGTCTGAAGTGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTA
320 CTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTA
* *
70870 CACTTCGATTTTTTAGTTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCA
385 CACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCA
* * *
70935 AATTTGGGG-CAAAACTCCTTCTGAAAAAAATTTAAAAAAAATCCCAAACTGTAAAAAGTTTCAA
450 AGTTTGGGGCCAAAACTCCTTCTG-AAAAAATTT-TAAAAAAT-CCAAACCGTAAAAAGTTTCAA
* * * *
70999 AAATCGTGAAAAATAGAAAACAAGTCGTCTTGCCATTAAACTTTACATGAAGGCTTAAGGGACCA
512 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCA
* *
71064 TTGTATGAATTTAGAAGCCATAAAAACGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAAC
577 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAAC
* * *
71129 CCACCTACCACCCTATCGATCCATGGCTTGCGCTTCCCGTCTCTCTGGCCGGCGTAGTGGCCGCC
642 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCC
71194 CGCC
707 CGCC
71198 CGCTCATTCC
Statistics
Matches: 1411, Mismatches: 150, Indels: 72
0.86 0.09 0.04
Matches are distributed among these distances:
879 63 0.04
880 259 0.18
881 94 0.07
882 158 0.11
883 117 0.08
884 3 0.00
885 2 0.00
887 15 0.01
888 256 0.18
889 97 0.07
890 96 0.07
891 4 0.00
892 3 0.00
893 1 0.00
894 5 0.00
895 136 0.10
896 52 0.04
897 50 0.04
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (889 bp):
GCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTGTAAGATTGAACCAGAC
GAGGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCTGTATTTTTTTTCGCTCGGGG
CACCATCGTCGGAGCATCACCGGAGAACCTGACGACGACATTGCAGTTTTGGCGATTGGGGTGGC
GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
CTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
GTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTACACTTC
GAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTG
GGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCAAACCGTAAAAAGTTTCAAAAATCATGA
AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAA
TTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCACCTACC
ACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCACCCG
CTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAGATCAGATCGAG
GTGAGTACAGATGGCATACGGAGGGGGGGACCCGATCGATCCCCGGCTTACGCATCCTGCCCCTC
TGGCTGGCTAAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAG
Found at i:70529 original size:26 final size:26
Alignment explanation
Indices: 70491--70543 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
70481 GTTGACTTAG
*
70491 GCATACAGGGTTCATTCCCAGTCTAA
1 GCATACAGGGTTCATTCCCAGTATAA
70517 GCATAC-GGAGTTCATTCCCAGTATAA
1 GCATACAGG-GTTCATTCCCAGTATAA
70543 G
1 G
70544 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 2 0.08
26 23 0.92
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGGGTTCATTCCCAGTATAA
Found at i:70841 original size:888 final size:874
Alignment explanation
Indices: 68713--71205 Score: 3341
Period size: 888 Copynumber: 2.8 Consensus size: 874
68703 CCAAGTCTAA
* * * * *
68713 GCATACAGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCACAGTGTAAGATCGGA-TAGGA
1 GCATACAGGGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCA-GA
* * * *
68777 CCGA-GGGTTGTGGGTGCACATGCTGGGCTCAGGCTTGTGCTGGTGCCGTATTTTTTATTTGCCC
65 -CGAGGGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCCTTATTTTTT-TTCGCTC
* ** *
68841 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCAGC-AGCATTGGGGTTTTGACGATTGG
128 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCGA-CATTGCAGTTTTGGCGATT--
* * * *
68905 CGGGGGTCGGGGGGTGTGCACACATGATGTGGGGTGGGTGCTGGTACTTGGCCCTTATATTGGCC
190 -----GTGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
*
68970 CCCTATGCCTCAAT-AAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGT
250 CCCTAT-CCTC-ATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
* * **
69034 TTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTCTCAACTGGTCACAAAATGTT
313 TTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCAT
* * *
69099 GTACACTTTGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
378 GTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTA
*** *
69164 CCAAGTTTGGGGCCAAAACT-CTTTTGAAAAAA-TTTTAGAAAAATCCTGAACCGT-AAAAGTTT
443 CCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTTA-AAAAATCC-CAACCGTAAAAAGTTT
*
69226 CAAAAATCATGAAAAATAGAAAA-GAGTCGTCTTGCCATGAAACTTCACACGAAGGCTTAAGGGA
506 CAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA
69290 CCATTGTAT-AATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTA
571 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTA
* * * *
69354 AACCCACCTACCATCCTATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGCTGGCATAGTGCCC
636 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC
* ** *
69419 GCCCGCCGCCCGTTTGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
701 G--C-CCGCCCGCTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCA
* * **
69484 GATCGGATCGAGGGTCGTGGCTCGTAGGGGGGACCCGATCGATCCCCGGCTTGGGCATCCTGCCC
763 GATCAGATCGAGGGTCGTGGCTCGGAGGGGGGACCCGATCGATCCCCGGCTTACGCATCCTGCCC
* *
69549 CTCTGGTTGGCTAAGCGCCCGCACACTCTTTTCGTGGGTTGACTTAG
828 CTCTGGCTGGCTAAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAG
* *
69596 GCATAC-GGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTGTAAGAT-TGAACCAG
1 GCATACAGG-GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAG-ACCAG
* * * * *
69659 AC-AGAGGGTTGCGGGTGCACATGCTAGGCTCTGGCATGTGTTGGTG-CTGCATTTTTTTTCGCT
64 ACGAG-GGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCCT-TATTTTTTTTCGCT
* ** * * * *
69722 C-GGGCACCATCGTCGGTGCATCGTCAGAGAACCTGATCGACGACATTGCAGTTTCGGCGATTGG
127 CGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCGACATTGCAGTTTTGGCGATT--
69786 GGTGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
190 -GT---GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
* ***
69851 CCTATCCCTCATCAAACCTCTAGAACTCACACCTGTTTAAAGAGCATTTGAGATTTTACAGGTTT
251 CCTAT-CCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
*
69916 GCTGCCAGTAGCCATTAAAGTGTCTAAAATTGGGACACTTTTTTCAAATGGTCACAAAATCATGT
315 GCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGT
* * *
69981 ACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCATGCCAAAAAAAATATAAGGATCACGTCTACC
380 ACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACC
* *
70046 AAGTTTGGGGCCAAAAATCCTTCCAAAAAAATTTTTAAAAAATCCCAACCGTAAAAAGTTTAAAA
445 AAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTTAAAAAATCCCAACCGTAAAAAGTTTCAAA
* * *
70111 AATTATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGGCCAT
510 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCAT
* * *
70176 TGTATGAATTTACAAGCCAT-AAAATGGCATTGGCATGGCAGAACTATGAAGATGTTCCTAAACC
575 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACC
* * * *
70240 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGACGCAGTGCCCGCCA
640 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC
* * * * *
70305 ACCCGCTCATTTCGTCGGTTGGCTTAGGCGTACGGAGTTCGTTCCTAGACTAAGATCAGATCAGA
705 GCCCGCTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAGATCAGA
*
70370 TCGAGGGTTAGAGTAGCAGGATTGGCATCACGGAGGGGGGGATCCGATCGATCCCCGGCTTACGC
770 TCGA--G---G-GT--C--G--TGGC-T--CGGA-GGGGGGACCCGATCGATCCCCGGCTTACGC
* *
70435 ATCCTGCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
819 ATCCTGCCCCTCTGGCTGGCTAAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAG
*
70491 GCATACAGGGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCAGACCAGAT
1 GCATACAGGGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCAGA-
* * *
70556 CGAGGGGTTGTGGGTACACATGTTGGGATCAGGCATGTGCTGGTGCCTTATTTTTTTTCGCTCGG
65 CGAGGGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCCTTATTTTTTTTCGCTCGG
* ** *
70621 GGCACCATCGGCAAAGCATCACCGGAGAACCTGACCGGCGACATTACAGTTTTGGCGA-T-T-GG
130 GGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCGACATTGCAGTTTTGGCGATTGTGGG
** *
70683 GGGGTGTGCGCACATGATGTATGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCTATCTCT
195 GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC-CT
* *
70748 CATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAAATTTTACAGGTTTGCTGCCAGT
259 CATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGT
* * * *
70813 AGCCATTAAAATGTCTGAAGTGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGA
324 AGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTACACTTCGA
* * *
70878 TTTTTTAGTTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAATTTGGG
389 GTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGG
* ** * *
70943 G-CAAAACTCCTTCTGAAAAAAATTTAAAAAAAATCCCAAACTGTAAAAAGTTTCAAAAATCGTG
454 GCCAAAACTCCTTC-CAAAAAAATTTTTAAAAAATCCC-AACCGTAAAAAGTTTCAAAAATCATG
* * *
71007 AAAAATAGAAAACAAGTCGTCTTGCCATTAAACTTTACATGAAGGCTTAAGGGACCATTGTATGA
517 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGA
* *
71072 ATTTAGAAGCCATAAAAACGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCACCTAC
582 ATTTACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCACCTAC
* * *
71137 CACCCTATCGATCCATGGCTTGCGCTTCCCGTCTCTCTGGCCGGCGTAGTGGCCGCCCGCCCGCT
647 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCT
71202 CATT
712 CATT
71206 CCCAGTCTAA
Statistics
Matches: 1416, Mismatches: 152, Indels: 77
0.86 0.09 0.05
Matches are distributed among these distances:
877 5 0.00
879 62 0.04
880 255 0.18
881 95 0.07
882 159 0.11
883 109 0.08
884 2 0.00
885 2 0.00
887 13 0.01
888 262 0.19
889 95 0.07
890 108 0.08
891 4 0.00
892 2 0.00
894 3 0.00
895 135 0.10
896 53 0.04
897 52 0.04
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (874 bp):
GCATACAGGGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCAGAC
GAGGGGTTGTGGGTGCACATGCTGGGCTCAGGCATGTGCTGGTGCCTTATTTTTTTTCGCTCGGG
GCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCGACATTGCAGTTTTGGCGATTGTGGGG
GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTCA
TCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
CCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTACACTTCGAGT
TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
CAAAACTCCTTCCAAAAAAATTTTTAAAAAATCCCAACCGTAAAAAGTTTCAAAAATCATGAAAA
ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTT
ACAAGCCATAAAAATGGCATTGGCATGGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACC
CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCATT
TCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAGATCAGATCGAGGGTCGT
GGCTCGGAGGGGGGACCCGATCGATCCCCGGCTTACGCATCCTGCCCCTCTGGCTGGCTAAGCGC
CCGCACACTCGTTTCGTGGGTTGACTTAG
Found at i:77090 original size:26 final size:26
Alignment explanation
Indices: 77012--77083 Score: 144
Period size: 26 Copynumber: 2.8 Consensus size: 26
77002 GTTGACTTAG
77012 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
77038 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
77064 GCATACGGAGTTCATTCCCA
1 GCATACGGAGTTCATTCCCA
77084 ATGTAAGATC
Statistics
Matches: 46, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 46 1.00
ACGTcount: A:0.26, C:0.28, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:77974 original size:26 final size:26
Alignment explanation
Indices: 77938--77990 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
77928 GTTGACTTAG
77938 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
77964 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
77990 G
1 G
77991 ATCGGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:78862 original size:26 final size:26
Alignment explanation
Indices: 78826--78878 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
78816 GTTAACTTAG
*
78826 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
78852 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
78878 G
1 G
78879 ATCAGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:78909 original size:890 final size:891
Alignment explanation
Indices: 77038--79859 Score: 4050
Period size: 892 Copynumber: 3.2 Consensus size: 891
77028 CCCAGTCTAA
* *
77038 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAATGTAAGATCGGACCGGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGAC
* * * * *
77103 CGAGGGTTGCGGGTGCACATGCTAGGCTTGGGCATGTGCTGGTGCCGTATTTTTTTT-GCCCAGG
66 CGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCTCGGG
* * *
77167 GCACCATCACCGAAGCATCATTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGG
131 GCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATT--GGGG
*
77232 GGCAAAGGGGGTGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
194 GGC---GGGGG-GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
*
77297 CCCTATCCC-CTATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGC
255 CCCTATCCCTC-ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
77361 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC-CAAAATCCT
319 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCT
* * *
77425 GTACACTTCTAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAATGATCATGTCTA
384 GTACACTT-TAGTTTTTAGCTGAATTGTTTTGTGCATG-CAAAAAAAATACAAGGATCACGTCTA
* *
77490 CAAAGTTTGGGGCCAAAACTCCGTCTGAAAAAATTTTAAAAAAAT-TCCGAACCGTAAAAAGTTT
447 CCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCT-CGAACCGTAAAAAGTTT
**
77554 CAAAAATCGTGAAAAATAAAAAATAAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA
511 CAAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA
*
77619 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAG-AAATATGAAGAAGTGCCT
576 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAAATATGAAGATGTGCCT
77683 AAACCCACCAACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGATGTAGTGCC
641 AAACCCACCAACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCG-TGTAGTGCC
* * * * * *
77748 CTCCCCCCCACTCGTTTCGTCAGTTAGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAAA
705 CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGA
* * ** ***
77813 CCGGACCGAGGGTTGTGGCAGCAGGATCTACAGCACGCAGGGGAAACCCGACCGATCCTCATTTT
770 CCGGACCGAGGG-T-TGGCAGCAAGATCGACAGCACGCAGGGGGGACCCGACCGATCC-CCGCTT
** * * * * * * * * *
77878 GGGCATCTTGCCCTTCTGTCTGGTTGAGCACCTGCACACTCGTTTCGTGGGTTGACTTAG
832 AAGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTAG
* *
77938 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACTGGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGAC
* *
78003 CGAGGG-T-CGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTTTTAG-TCGGG
66 CGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCTCGGG
** * * * *
78065 GCACCATCGTCGGAGCATTGTCGGAGAACCTAACCGGCGGCATTGGGGTTCTGACAATTGGGGAG
131 GCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGG-G
*
78130 GCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGGCCCTTATATTGG-CCCCTA
195 GCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
*
78194 TCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
260 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
*
78259 CCAGTAGCCATT-AAGCGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACAC
325 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACAC
* *
78323 TTTGAGTTTTTAGCTGAATTGTTTTGTGCATG-AAGAAAAATACAAGGATCACATCTACCAAGTT
390 TTT-AGTTTTTAGCTGAATTGTTTTGTGCATGCAAAAAAAATACAAGGATCACGTCTACCAAGTT
* * *
78387 TGGGGCCGAAACTCCTTCTGAAAAAATTTTAAAAAAATCTCGAATCGTAAAAAGTTTCAAAAATT
454 TGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATC
* *
78452 GTTAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGC-TAAGGGACCATTGTA
519 GTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTA
78516 TGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAAATATGAAGATGTGCCTAAACCCAC
584 TGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAAATATGAAGATGTGCCTAAACCCAC
** *
78581 CTGCCACCCTATCGATCCACGGCTT-CGCATCCCGTCTCTCTGGCCAGTGTAGTGCCCGCCCGCC
649 CAACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCC-GTGTAGTGCCCGCCCGCC
* * * *
78645 CGCTCGTTTCGTCGGTTGGCTTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCG
713 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCG
78710 AGGGTTGCGACAGCAAGATCGACAGCACGCAGGGGGGACCCGACCGATCCCCGCTTAAGCATCCT
778 AGGGTTG-G-CAGCAAGATCGACAGCACGCAGGGGGGACCCGACCGATCCCCGCTTAAGCATCCT
* ** *
78775 GCCCCTCTGGCCGGCTGAGCGCCCACACGCTTATTTTGTGGGTTAACTTAG
841 GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTAG
* *
78826 GCATACGGAGTTCATTCTCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACTGGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGAC
* *
78891 CGAGGGTTACGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTG-C-CATTTTTTTTCGTTCGGG
66 CGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCTCGGG
*
78954 GCACCATCACCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATT-GGGGG
131 GCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGG
*
79018 CGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTAT
196 CGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* * *
79083 CCCTCATCAAATCTCGAGAACTCACACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTACTGC
261 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
* * ** *
79148 CAGTAGCCATTAAAATGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCAATACAGT
326 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACT
* * *
79213 TTCAAGTTTTTAGCTGAATTGTTTTCTGCATGCCAAAAAAAATACAAGGATAACGTCCACCAAGT
391 TT--AGTTTTTAGCTGAATTGTTTTGTGCATG-CAAAAAAAATACAAGGATCACGTCTACCAAGT
* * *
79278 TTGGGGCCAAAAGTCCTTCTAAAAAAATTTTAAAAAAATCTTGAACCGTAAAAAGTTTCAAAAAT
453 TTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAAT
*
79343 CGTGAAAAATAAAAAACGAGTC-TCTTGCCATGAAACTTCACATAAAGGCTTAAGGGACCATTGT
518 CGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGT
*
79407 ATGAATTTACAAGCCATAAAAATGGCATTGGAATGGCA-AAAATATGAAGATGTGCCTAAACCCA
583 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAAATATGAAGATGTGCCTAAACCCA
* * * * * *
79471 CCAACCACCCTATTGATCCATGACTTGCGCATCCC-TCTTCTCTGACTGGCGTAGTGCTCGCCCG
648 CCAACCACCCTATCGATCCATGGCTTGCGCATCCCGTC-TCTCTGGC-CGTGTAGTGCCCGCCCG
* * ** *
79535 CCCGCTCGTTTCGTCGGCTGGCTTAGGCATACGGAGTTCATTCCTAATCTAAGATTGGACCAGAC
711 CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGAC
* * * * * * **
79600 CGAGGGTT-GCAGCTATAGGATCGGCAACATGCA-GGGGGACTCGATCGATCCTCGACTTCCGCA
776 CGAGGGTTGGCAGC-A-A-GATCGACAGCACGCAGGGGGGACCCGACCGATCCCCG-CTTAAGCA
* * * *
79663 TCCTACCCCCCTGGCCGGCTGAGGGCCCGCACGCTCGTTTTATGGGTTGACTTAG
837 TCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTAG
* * ** * *
79718 GCATACGGACTTCATTCCCAGTCTAAGCACATAGAGTTCATT-CCAGTGTAAGGTCAGACCAGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGAC
* * * * *
79782 CGAGCGTTGTGGGTGCACATGCTGGACTCGAGCATGTGCTGGTGTCGCATTTTTTTTTCGCTCGG
66 CGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA-TTTTTTTTCGCTCGG
79847 GGCACCATCACCG
130 GGCACCATCACCG
79860 ATCCCCGGCT
Statistics
Matches: 1736, Mismatches: 157, Indels: 64
0.89 0.08 0.03
Matches are distributed among these distances:
887 60 0.03
888 212 0.12
889 297 0.17
890 243 0.14
891 189 0.11
892 476 0.27
893 52 0.03
894 32 0.02
896 4 0.00
897 3 0.00
898 97 0.06
899 2 0.00
900 69 0.04
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (891 bp):
GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGAC
CGAGGGTTGCGGGTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGCTCGGG
GCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGG
CGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACT
TTAGTTTTTAGCTGAATTGTTTTGTGCATGCAAAAAAAATACAAGGATCACGTCTACCAAGTTTG
GGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGT
GAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATG
AATTTACAAGCCATAAAAATGGCATTGGCATGGCAGAAAATATGAAGATGTGCCTAAACCCACCA
ACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGTGTAGTGCCCGCCCGCCCGC
TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGG
GTTGGCAGCAAGATCGACAGCACGCAGGGGGGACCCGACCGATCCCCGCTTAAGCATCCTGCCCC
TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTAG
Done.