Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168046.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_298, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37270

Tables:   1   

This is table  1  of  1  ( 77 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2180--2231
23
2.3
23
89
0
77
73
3
5
17
1.19
2418--2457
19
2.0
20
85
4
55
77
0
15
7
0.98
3157--3197
22
1.9
21
85
5
55
73
2
4
19
1.13
3157--3263
55
1.9
55
83
5
135
72
1
11
14
1.19
3721--3755
18
1.9
18
88
0
52
68
0
17
14
1.21
3790--3830
22
2.0
20
85
9
55
73
4
12
9
1.24
5221--5276
28
2.0
27
83
10
69
66
1
16
16
1.35
5675--5715
22
1.9
21
85
5
55
75
2
2
19
1.03
6424--6476
23
2.3
23
90
0
79
71
3
5
18
1.21
6652--6693
20
2.2
19
87
12
59
76
0
16
7
1.00
6652--6693
19
2.2
20
86
4
59
76
0
16
7
1.00
7384--7424
22
1.9
21
85
5
55
73
2
4
19
1.13
7433--7476
23
1.9
24
81
9
56
72
2
15
9
1.19
7384--7491
56
1.9
56
83
5
137
73
1
11
13
1.18
7710--7756
23
2.1
22
84
11
60
74
6
10
8
1.22
8028--8083
25
2.3
23
78
9
58
75
5
8
10
1.19
9906--9946
22
1.9
21
85
5
55
75
2
2
19
1.03
10026--10054
13
2.1
14
93
6
51
75
6
10
6
1.17
10211--10257
18
2.6
18
89
3
76
76
10
0
12
1.02
11895--11950
28
2.0
27
83
10
69
66
1
16
16
1.35
12945--13000
28
2.0
27
83
10
69
66
1
16
16
1.35
13343--13384
20
2.2
19
87
12
59
76
0
16
7
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13343--13384
19
2.2
20
86
4
59
76
0
16
7
1.00
14071--14111
22
1.9
21
85
5
55
75
2
2
19
1.03
14102--14156
20
2.9
19
72
17
51
70
1
14
12
1.24
14667--14700
17
1.9
18
88
5
52
67
0
17
14
1.23
14667--14700
18
1.9
17
88
5
50
67
0
17
14
1.23
16169--16224
28
2.0
27
83
10
69
66
1
16
16
1.35
16624--16664
22
1.9
21
85
5
55
75
2
2
19
1.03
17690--17730
22
1.9
21
85
5
55
75
2
2
19
1.03
17971--18049
17
4.2
19
70
22
51
73
5
8
12
1.23
18246--18279
17
1.9
18
88
5
52
67
0
17
14
1.23
18246--18279
18
1.9
17
88
5
50
67
0
17
14
1.23
18819--18872
22
2.4
22
79
14
56
75
5
7
11
1.16
19742--19797
28
2.0
27
83
10
69
66
1
16
16
1.35
20769--20824
28
2.0
27
83
10
69
66
1
16
16
1.35
21223--21263
22
1.9
21
85
5
55
75
2
2
19
1.03
22014--22062
23
2.2
21
85
7
62
77
2
8
12
1.07
22246--22287
20
2.2
19
87
12
59
76
0
16
7
1.00
22246--22287
19
2.2
20
86
4
59
76
0
16
7
1.00
22962--23002
22
1.9
21
85
5
55
73
2
4
19
1.13
23089--23127
16
2.6
16
88
8
55
79
5
10
5
1.04
23254--23332
17
4.2
19
70
22
51
73
5
8
12
1.23
23602--23667
25
2.7
23
76
15
62
75
7
7
9
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24068--24129
23
2.6
24
80
17
76
75
1
8
14
1.10
25451--25491
22
1.9
21
85
5
55
75
2
2
19
1.03
26063--26118
28
2.0
27
83
10
69
66
1
16
16
1.35
26245--26293
23
2.2
21
85
7
62
77
2
8
12
1.07
26475--26515
19
2.2
19
86
0
55
75
0
17
7
1.02
26603--26646
20
2.2
20
84
4
54
75
0
9
15
1.05
26919--26952
18
1.9
17
88
5
50
73
0
8
17
1.08
27246--27286
22
1.9
21
85
5
55
73
2
4
19
1.13
27295--27338
23
1.9
24
81
9
56
72
2
15
9
1.19
27242--27353
56
2.0
56
84
5
145
73
1
11
13
1.18
27557--27635
17
4.2
19
70
22
51
73
5
8
12
1.23
27906--27971
25
2.7
23
76
15
62
75
7
7
9
1.18
28403--28456
22
2.4
22
79
14
56
75
5
7
11
1.16
29001--29033
17
1.9
18
88
11
52
78
0
9
12
0.95
29720--29760
22
1.9
21
85
5
55
75
2
2
19
1.03
30525--30577
23
2.3
24
80
9
65
77
1
7
13
1.06
30759--30797
19
2.1
19
85
0
51
76
0
15
7
0.99
31515--31555
22
1.9
21
85
5
55
73
2
4
19
1.13
31515--31623
54
2.1
51
84
8
139
74
1
10
13
1.15
31562--31605
23
1.9
24
81
9
56
72
2
15
9
1.19
31823--31880
20
3.1
19
73
19
50
74
3
8
13
1.19
32098--32132
18
1.9
18
88
0
52
68
0
17
14
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32155--32194
17
2.2
17
86
8
53
77
2
7
12
1.07
32172--32227
25
2.3
23
78
9
58
75
5
8
10
1.19
32664--32717
22
2.4
22
79
14
56
75
5
7
11
1.16
34004--34044
22
1.9
21
85
5
55
75
2
2
19
1.03
34802--34851
23
2.3
21
86
6
64
76
2
8
14
1.10
35033--35073
18
2.3
18
84
12
50
75
0
17
7
1.02
35794--35834
22
1.9
21
85
5
55
73
2
4
19
1.13
35794--35900
55
1.9
55
83
5
135
72
1
11
14
1.19
36103--36160
20
3.1
19
73
19
50
74
3
8
13
1.19
37079--37131
23
2.2
24
83
3
72
71
1
11
15
1.22
37091--37137
23
2.1
23
84
7
62
70
0
17
12
1.17

Tables:   1

The End!