Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 100 of 190
Found at i:15737290 original size:879 final size:880
Alignment explanation
Indices: 15734924--15742429 Score: 8401
Period size: 891 Copynumber: 8.4 Consensus size: 880
15734914 GCAAACCTGT
* *
15734924 AAAACTCGAAGTGTACAAGATTTTGTGATCACTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
15734989 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCCCTTTAA-GGGGTGTGAGTTCTCGAGGTT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
15735053 TGATGAGGGATAGGGGGCCCATATAAGGGCCAAGTACTAGCACCCATCGCACATAATGTGCACAC
131 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* ** * *
15735118 ACCGCCCCCCCGGCCCCCCTGATCGCTGGAACCCCAATGCCAGCGGCCAGGTTCTCCGGCGATGG
196 A----CCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGTCAGGTTCT-C--C---GG
** * * *
15735183 TCCGACAATGGTGCCCCGGTGAAGAAAAAAGTGCCACCAACACATG-CTCGAGCCCAGCATGTGC
251 --CG---ATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCT-GAGCCCAGCATGTGC
* * * *
15735247 TGTCGTAACCCTCGATCTAGTTCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
310 TGCCGCAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
* * * * *
15735312 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCACTCAGTCGGCTAGAGGGGT
375 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
** * * **
15735377 GGGATGCACAAGCCAAGGATCGGTCGGG-CCCTCCTCTGCGTGCTGCTGATCCTGCTG-CTGCCA
440 GGGATGCACAAGCCGGGGATCGGTCGGGTCCC-CCTCTGCATGCTGCCGATCCTGCTGTC-GTAA
** * * * * **
15735440 CCCTC-AGTTTGGTCTAATCTTAGACTAGGAATGAACTCTGTCTACCTAAGCCAACCGACAAAAC
503 CCCTCGA-TCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-TGAA-
* *
15735504 GAGTGGGCGGGCGGGCGGGCGGGCAGGTAAGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGC
565 -A-T------------GAGCGGGCA-G---GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * ** *
15735569 CACGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-CTGTGCCAATGATAA
612 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAC-GTGCCAATGCCAT
* * * *
15735633 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCATCACGCGAAGTTTCCTGGTAAGACG
676 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
*
15735698 ACTCGTTTTCTATTTTTCATGATTTTTG-AACATTTTTACGGTTCGGGATTTTTTAAAATTTTTT
741 ACTCGTTTTCTATTTTTCATGATTTTTGAAAC-TTTTTACGGTTCGAGATTTTTTAAAATTTTTT
* * * *
15735762 TGGAAGGAGTTTTGTCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
805 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
15735827 GAATTCAACTA
870 AAATTCAGCTA
* * *
15735838 AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTTCAAACACTTTA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTA
* *
15735903 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTCTAAGGGAGTGTGAGTTCTCGAGGT
65 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
15735968 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
130 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * **
15736033 CACCCCCCGGCCCCCCCGATCGCTAGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCC
195 CACCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGTCAGGTTCT-C--CG--G---C
* * * *
15736098 GGTGATGGTGCCCCGACGAAGAAAAATGCGACACTAGCACATGCCTGAGCCCAGCATGTGCTACC
252 ---GATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCC
*
15736163 GCAA--CTC--T-T-G---G-TC-----C-----A-G---TTTG-AT-CTTAGACTGGGAATGAA
314 GCAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
* * * *
15736202 CTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAACCGGCCAGACGGACGGGA
379 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* ** * * * *
15736267 TGCGCAAGCAAGGGATCGATCGGGTCCCCCTCTGCATGCTGTCGATCCTACTATCGTAACCCTC-
444 TGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTCGTAACCCTCG
** * * *
15736331 AGTCCACTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGA
509 A-TCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG--A--A---A
* * *
15736396 GCGGGGTGGGCGGGCAAGCACTATGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAG
566 ------TGAGCGGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAG
* * ** *
15736461 GATGGTAGGTGGGTTTTGGCACATCTTCATATTTCTACGTGCCAATGATATTTTT-TCAGCTTGT
625 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT-GGCTTGT
* * *
15736525 AAATTCATACAATGGTCCCTTAAGCCTTCACGCGAAGTTTCATGGTAAGACGACACGTTTTCTAT
689 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* ** * *
15736590 TTTTCGTGATTTTTGAAACTTTTTGGGGTTCGGGATTTTTTAAAATTTTTTCGAAAAGAGTTTTG
754 TTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTG
* * *
15736655 CCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
819 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
15736717 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
15736782 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAGTGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
*
15736847 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCAC
131 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
** * * * * *
15736912 ATGCCCCGGACCCCCTGATCACCAGAACCCCAATGCCACCAGTCAAGTTCTCCGGCGATGGTGCC
196 ACCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGGTGCC
* * *
15736977 CCAACGAAGAAAAATGTGGCACCAGCATATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTTGGT
261 CCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* ** * *
15737042 CAAGTTTGATCTTAGACTGGGAATGACCTCTGTATGCTTATACTGGGAATGAACTCCGTATGCCT
326 CTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * ** *
15737107 AAGTCAACCCACAAAACGAGCGTGCGGGTGCTCAGTCAACCAGAGGGGCAGGATG-ATCAAGCCG
391 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCA-CAAGCCG
* * * * *
15737171 GGGATCGGTCGGGTCCCCCTCTGCGTGGTGCCGATCTTGCTGTCGTAACCCTCGATGCGGTCTGA
455 GGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTCGTAACCCTCGATCCGGTCTAA
15737236 TCTTAGACTGGGAATGAACT-CGTATGCCTAAGCCAACCGATGAAATGAGCGGGCAGATGGGCGA
520 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGA----GC----GGGC-A
* * *
15737300 GCGGGCACTACGTCGGCCAGAGAGACGGGGTGCGTAAGCCATGGATAGATAGGGTGGTAGGTGGG
576 ---GGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGG
*
15737365 TTTTGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
638 TTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
15737430 GTCCCTTAAGCCTTCACGTGAAGTATCATGGCAAGAGGACTCGTTTTCTATTTTTCATGATTTTT
703 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* *
15737495 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCGCAAACTTGGT
768 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGT
* * * *
15737560 AGACATGATCCTTGTATTTTTGTTGGGATGCCCAAAAACATTCAGCTA
833 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* * * *
15737608 AAATCTCGAAGTGCATAAGATTTTATGACCATTTGAAAAAAGTGT-CCC---T-----A--TT--
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
15737660 T--C-A---G-A-C-AACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
15737716 TGATGAGGGATAGGAGGCCAGTATAAGGGCCAACTACCAGCACCCATCGCACGTCATGTGCGCAC
131 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* **
15737781 ACCCCCTGG-CCCCCCGATCGCCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCG
196 ACCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGTCAGGTTCTCC------G----G
** *
15737845 ACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCAAAGCCCAGCATGTGCTACCG
251 -CGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCG
* * * *
15737910 CAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAATTTTGTATGCTTAGACTAGGAATGAAC
315 CAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAAC
* * * *
15737975 TCCGTATGCCTAAGTGC-ACCCACGAAACAAGCGTACGGGCGCTCAGTCGGCCAGAGGGGTGGGA
380 TCCGTATGCCTAAGT-CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
**
15738039 TGCACAA------G--C---CGGGTCCCCCTCTGCATGCTATCGATCCTGCTG-CTGTAACCCTC
444 TGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTC-GTAACCCTC
* *
15738092 AATCCAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGG
508 GATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG-AA--A-T-G
* * * * * **
15738157 ACGGGCGGGCGGGCGGGCTTTACGTCGGCCAGTGAGATGAGATGCGCAAGCTGTGGATCGATAGG
568 A---GCGGGCAGGC--AC--TACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGG
* *
15738222 GTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAA
626 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAA
* *
15738287 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGCTTTCTATTT
691 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * *
15738352 TTCACGATTTTTGAAACTTTTTGA-GGTTCG-GGTTTTTTCAAATATTTTT-GGAAGGAGTTTTG
756 TTCATGATTTTTGAAACTTTTT-ACGGTTCGAGATTTTTTAAAAT-TTTTTCGAAAGGAGTTTTG
* * *
15738414 GTCCCAAACTTGGTAGATGTGATCCTTGTA-TTTTGTTGGCATGCACAAACAAATTCAGCTA
819 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
15738475 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
15738540 TGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTCGAGATT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
*
15738605 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCAC
131 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * ** * *
15738670 AACCCCCCCGG-TCCCCCGATCGTCGGAACCCTAATGCCGTCGGTCCGATTCTCCGACGATGCTA
196 -A-CCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGT-C-A------G--G-TTCTC
* * * *
15738734 CGGCGATGGTGCCCTGACGAAGAAAAATGTGGCACCAACACATACCCGAGCCCAGCATGTGCTGC
248 CGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGC
* * *
15738799 CGTAACCCTCGGTCT-GATCCGATCTTAGAGTGGGAATGAACTCTGTATGCTTAGACTAGGAATG
313 CGCAACCCTCGGTCTAG-TCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATG
* * * * * * *
15738863 AACTCGGTTTGCCTAAGTCAACCCACGAAACGAGCGTACGGGTGCTCAACCGGCCAGAAGGGCAG
377 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
** * * * * ** *
15738928 GATGCGTAAGCCGGGGATCGGCCAGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCACAGCCCT
442 GATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTCGTAACCCT
* * * *
15738993 CGATCCGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCGTAAGCCAACCGACGAAATGAGCG
507 CGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGA---
* ** *
15739058 GGCGGGCGGGCACTA--TACTGGCCAGAGAGACAAGATGCGCAAGCCGTGGATCGATAGGGTGGT
569 -GCGGGCAGGCACTACGT-C-GGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGT
* *
15739121 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
631 AGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
* ** * *
15739186 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACATAACTCATTTTCGATTTTTCAT
696 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* * *
15739251 GATTTTTGAAACTTTTTACGATTAGAGATTTTTTAAAATTTTTTCGAAAGGATTTTTGG-CCCAA
761 GATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAA
* * *
15739315 ACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAGAAAAATTCAGCTA
826 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
15739370 AAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAACGTGTCCCCATTTCAGACACTTTAA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * * *
15739435 TGGCTACTGACAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCAAGGTT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
*
15739500 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCAC
131 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *** *
15739565 ACCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGAGGCCGGTCACATTTTTTGGCGATGCTCCG
196 ACCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGT--CA-------G-G-TTCTCCG
* * * * *
15739630 GCGATGGTGACCCGACGAGGAAAAATGAGACACCAGCA-AGTGCCTGAGCCCAGCATGTGTTGCC
250 GCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACA-TGCCTGAGCCCAGCATGTGCTGCC
* * * *
15739694 GCAACCATCGGTCCAGTCCGATATTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
314 GCAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
* *
15739759 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGTCAGAGGGGCGGGA
379 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * * * * * *
15739824 TGCGCAAGCTGGGGATCGATCGAGTCCCCCTCTGCATGCTACTGATCCTGCTG-CAGCAACTCTC
444 TGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTC-GTAACCCTC
* * * * ** *
15739888 GGTCTGGTCTAATCTTAAACTGGGAATGAACTCCGTATGGCTAAGCCAACCGACAAAACGAGCGG
508 GATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGCGG
* * * * * *
15739953 GCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGCGGG
573 GCAGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGG
*
15740018 TTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
638 TTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
15740083 GTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCGTTTTTTATTTTTCATGATTTTT
703 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
*
15740148 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
768 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGT
* * * *
15740213 AGACGTGATCCTTGTATTTTTTTTGGCATACACAAAAAACTTCAACTA
833 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* * *
15740261 AAAACTTGAAGTGTACAAGATGTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
15740326 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGTGGTT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
*
15740391 TGATGAGGGATAGGGGGAACAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
131 TGATGAGGGATAGGGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--
* *
15740456 CACACCCCCCTCGGCCCCCCCGATCGCCGGAACCCTAATGCCACCGGTCAGGTTCTCCGGTGATG
193 CACA-CCCCC-CGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGTCAGGTTCTCC---G--G
*** * *
15740521 CCCCAGTGATGGTGCCCCGACGAAGAAAAATGCCACACCAACA-ACTGCCTGAGCCCAGTATGTG
251 ---C---GATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACA-TGCCTGAGCCCAGCATGTG
** * * * *
15740585 CTATCGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTC-CTACGCTTAGACTGGGA
309 CTGCCGCAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGA
* * * ***
15740649 ATGAACTCCATATTCCTAAGTCAACCTACGAAACGAGCGTGCGGTTACTCAGCCGGCCAGAGGGG
374 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* ** * * ** * * * *
15740714 CAGGATGGGCAAGCCGGGGATCGGTCGGGTACCCCTTTGTGTGCTACCGATCCTACTATCGAAAC
439 CGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTCGTAAC
* * *
15740779 CCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA
504 CCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGA
* * * ** * *
15740844 GCGGGTGGGCGGGCACTACGCCGACCAGAGAGACGGGATGATCAAGTCGTGGATCGATAGGGTGG
569 GC----GGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGG
* * * *
15740909 TAGGTGGGTTTAGGCACATCTTCATATTTCTACTTGGCAATGCCATTTTTATTGCTTGTAAATTT
630 TAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTC
* * * *
15740974 ATACAATGTTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAGGATGACTCGTTTTCTATTTTTCA
695 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* *
15741039 -GAATTTTGGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCC
760 TG-ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCC
* * *
15741103 AAACTTGGTAAACGTGATCCTTCTATTTTTGTTGGCGTGCACAAAAAAATTCAGCTA
824 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
15741160 AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTACAGACACTTTAA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* ** * *
15741225 TTGCTACTGATAGCAAAACTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
15741290 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCACACATCTTGTGTGCAC
131 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
** * * * **
15741355 ACCCCCCGGCCCCGTCGATCGTC-GAAACCCCTAACGTCGTCGGTCAGGTTCTCCGCCGATGCTC
196 ACCCCCCGGCCCCCCCGATCGCCAG-AACCCC-AATGCCACCGGTCAGGTTCT---CCG--G---
* ** * * **
15741419 CGGTGATGGTGCCCTGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCTAGCATGTAATG
251 C---GATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCC-AGCATGTGCTG
* ** *
15741484 CTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAAT-
312 CCGCAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATG
* * * * * *
15741548 AAGCTCCGTATGCCTAAGTCAACCCATGAAACAAGCATGCGGACGCTCAGTCGGCTAGAGGGGCG
377 AA-CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* ** ** * * *
15741613 GGATGCACAAGCCGGGGATC-GACCAGTCCCCCTCCACGTGCTGCCGATCCTACTAAT-GTAACC
441 GGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCT-GTCGTAACC
* ** * * *
15741676 CTCGGTTTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATAAAACGA
505 CTCGATCCGGTCT-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATG-
* * * * *
15741740 ACGGGCGGGCTGGTAGGCGGGCATTACGCCAGCCAGAGAGATGGGATGCGCAAGTCATGGATCGA
568 A---GCGGGC----A----GGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGA
* * *
15741805 TAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCAATTTTTATGGCTT
622 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTT
* *
15741870 GTAAATTGATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACGACTCGTTTTCT
687 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* ** * * ** * *
15741935 GTTCCTCACGATTTTTGAAACTTTTTGCAATTCAAGATTTTTTAAAATTTTTTCGAAAGGATTTT
752 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTT
*
15742000 TGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAAATTCAGCTA
817 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
15742063 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAA
1 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
15742128 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGCT
66 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
15742193 TGATGAGTGATAAGGGGCCAATATAA-GG----G--CCAGCACCCATCGCACATCTTGTACGCAC
131 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
** * * *
15742251 ACCCCCCCGGCCCCCTGGATCGTCAGAACCCCAATGCCGTCGGTCAGGTTCTTCGGTGATGCTCC
196 A-CCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCC-AC---C-GG-TC--AGGT--T-CTCC
* * * * * * *
15742316 GGTGATGGTGCCCCGGCGAAGAAAAATGTAGCACCAACACATTCCCGAGCCTAGCATGTGCTGCC
249 GGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCC
* *
15742381 GCAACCCTTGGT-TCGATCCGATCTTAGACTGGGAATGAACTCTGTATGC
314 GCAACCCTCGGTCTAG-TCCGATCTTAGACTGGGAATGAACTCTGTATGC
15742430 CTAAGTCAAC
Statistics
Matches: 5734, Mismatches: 642, Indels: 451
0.84 0.09 0.07
Matches are distributed among these distances:
865 3 0.00
867 130 0.02
868 154 0.03
869 335 0.06
870 5 0.00
871 4 0.00
872 2 0.00
873 9 0.00
874 3 0.00
875 3 0.00
876 3 0.00
877 3 0.00
878 185 0.03
879 498 0.09
880 9 0.00
882 3 0.00
883 12 0.00
885 6 0.00
886 167 0.03
887 15 0.00
888 8 0.00
889 108 0.02
890 238 0.04
891 722 0.13
892 70 0.01
893 165 0.03
894 549 0.10
895 557 0.10
896 341 0.06
897 118 0.02
898 59 0.01
899 420 0.07
900 3 0.00
901 5 0.00
902 97 0.02
903 172 0.03
904 251 0.04
905 1 0.00
906 2 0.00
907 3 0.00
908 1 0.00
909 1 0.00
910 3 0.00
911 1 0.00
912 104 0.02
913 2 0.00
914 46 0.01
915 56 0.01
916 82 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (880 bp):
AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
ACCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGGTGCC
CCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
CTAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGG
GGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTCGTAACCCTCGATCCGGTCTAAT
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGCGGGCAGGCACTACGT
CGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
TCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACG
GTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
Found at i:15737981 original size:26 final size:26
Alignment explanation
Indices: 15737931--15737983 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15737921 CTGGTCCGAT
* * **
15737931 CTTAGACTGGGAATGAATTTTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15737957 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15737983 C
1 C
15737984 CTAAGTGCAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15739746 original size:26 final size:26
Alignment explanation
Indices: 15739717--15739768 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
15739707 CAGTCCGATA
15739717 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
15739743 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
15739769 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:15741537 original size:26 final size:26
Alignment explanation
Indices: 15741508--15741560 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15741498 CCGGTCTGAT
*
15741508 CTTAGACTGGGAATGAA-CTCTGTATG
1 CTTAGACTGGGAAT-AAGCTCCGTATG
15741534 CTTAGACTGGGAATAAGCTCCGTATG
1 CTTAGACTGGGAATAAGCTCCGTATG
15741560 C
1 C
15741561 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 2 0.08
26 23 0.92
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAGCTCCGTATG
Found at i:15742689 original size:159 final size:159
Alignment explanation
Indices: 15742400--15742778 Score: 533
Period size: 159 Copynumber: 2.4 Consensus size: 159
15742390 GGTTCGATCC
* **
15742400 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGTGCTC
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTC
* * * * *
15742465 AGCCGGCCAGAGGGGCGGGAAGCGCAAGCCGGGGATCGGCCAGGTCCCCCTATGCGTGCTGCCGA
66 AGCCAGCCAGAAGGGCGAGAAGCGCAAGCCGGGGATCGGCCAGGTCCCCCTATACGTGCTACCGA
* **
15742530 TCCTATTGCCACAACGCTCAGTCCGGTTT
131 TCCTATTGCCACAACCCTCAGTCCGGTCG
* *
15742559 GATCTTAGACTCGAAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTC
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTC
* * * * *
15742624 AGCCAGCCAGAAGGGCGAGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGA
66 AGCCAGCCAGAAGGGCGAGAAGCGCAAGCCGGGGATCGGCCAGGTCCCCCTATACGTGCTACCGA
* *
15742689 TCCTGTTGCCGCAACCCTCAGTCCGGTCG
131 TCCTATTGCCACAACCCTCAGTCCGGTCG
* * ** *
15742718 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGC
1 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
15742779 GGGCGAGCTC
Statistics
Matches: 193, Mismatches: 27, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
159 193 1.00
ACGTcount: A:0.23, C:0.30, G:0.30, T:0.18
Consensus pattern (159 bp):
GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTC
AGCCAGCCAGAAGGGCGAGAAGCGCAAGCCGGGGATCGGCCAGGTCCCCCTATACGTGCTACCGA
TCCTATTGCCACAACCCTCAGTCCGGTCG
Found at i:15743343 original size:11 final size:11
Alignment explanation
Indices: 15743327--15743359 Score: 66
Period size: 11 Copynumber: 3.0 Consensus size: 11
15743317 TGGTCAGGTT
15743327 CTCCGACGATG
1 CTCCGACGATG
15743338 CTCCGACGATG
1 CTCCGACGATG
15743349 CTCCGACGATG
1 CTCCGACGATG
15743360 GTGCCCCGAT
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 22 1.00
ACGTcount: A:0.18, C:0.36, G:0.27, T:0.18
Consensus pattern (11 bp):
CTCCGACGATG
Found at i:15743476 original size:26 final size:26
Alignment explanation
Indices: 15743440--15743492 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15743430 CTGGTCCTAT
*
15743440 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15743466 CTTAGACTGGGAATGATCTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15743492 C
1 C
15743493 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.23, C:0.21, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15744381 original size:26 final size:26
Alignment explanation
Indices: 15744345--15744397 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15744335 CCGATTCGAT
15744345 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15744371 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15744397 C
1 C
15744398 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15744826 original size:906 final size:901
Alignment explanation
Indices: 15742562--15745273 Score: 3668
Period size: 906 Copynumber: 3.0 Consensus size: 901
15742552 CCGGTTTGAT
* * * *
15742562 CTTAGACTCGAAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** *
15742627 CAGCCAGAAGGGCGAGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGC-GGGGATCGGTCGAGTCCCCCTCTGTGTGCTGCCGATCC
* * * * *
15742692 TGTTGCCGCAACCCTCAGTCCGGTCGGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
130 TGTTGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
* * * *
15742757 CTGACG-AA-A-CGAGCGGGCGGGCGGGCGAGCTCTACGCCGGCCAAAGAGACGGGATGCGCAAG
195 CCGACGAAAGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
*
15742819 CCACGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCAT
260 CCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCAT
* * * *
15742884 TTTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGTAGGACA
325 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGTAAGACG
* *
15742949 AC-CGGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCAGTTCGGGATTTTTTAAAATTTTTT
390 ACTC-GTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTC-GGATTTTTTAAAATTTTTT
* *
15743013 CGGAAGGA----GGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGTTGGCATGCACAAAAA
453 TGGAAGGATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
15743074 TATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
15743139 GACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGT
* *
15743204 TCTCAAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCCAGTACCAGCACCCATCGCACATC
648 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
15743269 ATGTGCG--CACACCCCCCGACCCCCCGATCATCGGAACCCCAATGCCGTTGGTCAGGTTCTCCG
713 ATGTGCGCACACACCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCC--T--CCA-G-T-T-C-
* * ** * *
15743332 ACGATGCT-CCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATAAGCCACCAACACATT
769 A-GATTCTCCCG-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATG
* * * * * * *
15743396 CCCAAGCCCAACATGTGCTGCCGCAACCCTCAGTCTGGTCCTATCTTAGGCTGGGAATGAACTCC
832 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGATTCGATCTTAGACTGGGAATGAACTCC
15743461 GTATG
897 GTATG
* * * * * *
15743466 CTTAGACTGGGAATGATCTCCGTATGCCTAAGTCAACCCACG-AAGGAGCATGCGGGTGTTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * **
15743530 CGGCCAGAGGGGTGGGATGCGCACGCCGGGGATCGATCGTGTCCCCCTCTGTATGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAG-CGGGGATCGGTCGAGTCCCCCTCTGTGTGCTGCCGATCC
* ** * *
15743595 TGTTGCCACAACCCTTGGTCTAAT-TCAATCTTAGACTGGGAATGAACTTCGTATCCCTAAGCCA
130 TGTTGCCACAACCCTCGGTCCGATCT-GATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
* * * * * *
15743659 ACCAACGAAACGAGTGGGCGGGCGGACGGG-GGGTCACTACGCCAGCTAGAGAGACGGGATGCGC
194 ACCGACGAAA-GAGCGAGCGGGCGGGCGGGCGGG-CACTACGCCGGCCAGAGAGACGGGATGCGC
* * * *
15743723 AAGCCGTGGATCGATAGGGTGGTAGGTGGGATTAGGAACATCTTCATATTTCTACATGCCAATGC
257 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGC
* * * *
15743788 CATTTTTATGGCTTGTAAATTCACACAACGGTCCCTGAAGCCTTCAAGTGAAGTTCCATGGTAAG
322 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGTAAG
** *
15743853 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTGAAAATTTT
387 ACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTC-GGATTTTTTAAAATTTT
* *
15743918 TTTTGAAGGATTTTGGCCCCAAACTTGGT-GAACATGATCCTTGTATTTTTGTTGGCATGCACAA
451 TTTGGAAGGATTTTGGCCCCAAACTTGGTAG-ACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
15743982 AAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
15744047 TCAGACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTG
15744112 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
645 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
*
15744177 ATCATGTGCGCACACACCCCCTCGGCCCCCCCGATCGTTGGAACCCCAAATGCCTCCAG-TCAGA
710 ATCATGTGCGCACACACCCCC-C-GCCCCCCCGATCGTCGGAACCCC-AATGCCTCCAGTTCAGA
* * **
15744241 TTCTCCCGCGATGCTCCAACGACGGTGCCTTGACGAAGAAAAATGCGGCACCAACACATGCCCGA
772 TTCTCCCGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGA
*
15744306 GCCCAGCATGTGCTGCCGCAACCCTCAGTCCGATTCGATCTTAGACTGGGAATGAACTCCATATG
837 GCCCAGCATGTGCTGCCGCAACCCTCAGTCCGATTCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
15744371 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGTGTGCAGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * **
15744436 CGGCCAGAGGGGCGGGATGGGCAAGTCGGGGATTGGTCAAGTCCCCCTTTGTGTGCTGCCGATAT
66 CGGCCAGAGGGGCGGGATGCGCAAG-CGGGGATCGGTCGAGTCCCCCTCTGTGTGCTGCCGATCC
** * *
15744501 TACTGCCACAACCCTCGGACCGATCTGATCCTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
130 TGTTGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
* *
15744566 CCGACGAAATGAGCGAGTGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
195 CCGACGAAA-GAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * ** *
15744631 GTCATGGATCGATAGGGCGGTAGGTGGGTTTAGGCACGTCCTCATATTTCTGTGTACCAATGCCA
259 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
* * *
15744696 TTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
324 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGTAAGAC
* *
15744761 GACTCGTTTTCTATTTTTCATGATTTTCAAAAGTTTTTGCGGTTCGTGATTTTTTAACATTTTTT
389 GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCG-GATTTTTTAAAATTTTTT
*
15744826 TGGAAGGAGTTTTGGCCCGAAACTTGGTAGACGT-ATCCTTGTATTTTTGTTGGCATGCACAAAA
453 TGGAAGGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
15744890 ACATTCAGCTAAAAACTCGAATTGTACAAGATTTTGTGACCATTTTAAAAAAGTGTCCCCATTTT
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15744955 AGACACTTTAATGGCTACTGGCAGCAATCCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAG
*
15745020 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * * *
15745085 CATGTTCGCACTC-CCCCCAC-CCCCCCCGCTCGCCGGAACCCCAATGCCGCC-GATCAGGTTCT
712 CATGTGCGCACACACCCCC-CGCCCCCCCGATCGTCGGAACCCCAATGCCTCCAGTTCAGATTCT
* * * * *
15745147 CCGGTGATGCCCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACCAACACATGCCCGAGCTC
776 CCCGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
** * *
15745212 AGCATGTGCTAACGCAACCCTCGGTCC-AGTCTGATCATT-GACTGGGAATGAACTCCGTATG
841 AGCATGTGCTGCCGCAACCCTCAGTCCGATTC-GATC-TTAGACTGGGAATGAACTCCGTATG
15745273 C
1 C
15745274 CTAAGCCAAC
Statistics
Matches: 1584, Mismatches: 196, Indels: 58
0.86 0.11 0.03
Matches are distributed among these distances:
901 4 0.00
902 122 0.08
903 145 0.09
904 41 0.03
905 158 0.10
906 580 0.37
907 247 0.16
908 3 0.00
910 1 0.00
911 244 0.15
912 2 0.00
913 9 0.01
914 2 0.00
915 20 0.01
916 6 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (901 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCGGGGATCGGTCGAGTCCCCCTCTGTGTGCTGCCGATCCT
GTTGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAAC
CGACGAAAGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGTAAGACGA
CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGATTTTTTAAAATTTTTTTGG
AAGGATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCT
CAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACACCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCTCCAGTTCAGATTCTCCCGC
GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
GTGCTGCCGCAACCCTCAGTCCGATTCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:15745998 original size:26 final size:26
Alignment explanation
Indices: 15745969--15746021 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15745959 CCGGTCTGAT
15745969 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15745995 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15746021 C
1 C
15746022 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15746567 original size:49 final size:50
Alignment explanation
Indices: 15746508--15746612 Score: 167
Period size: 49 Copynumber: 2.1 Consensus size: 50
15746498 TGGCATGCAC
** * *
15746508 AAAAAAATTCAGCTAAAAACTTGAATTGTACAAGATTTTGTG-CCATTTG
1 AAAAAAATTCAGCTAAAAACTAAAAGTGTACAAGATTTTGAGACCATTTG
15746557 AAAAAAATTCAGCTAAAAACTAAAAGTGTACAAGATTTTGAGACCATTTG
1 AAAAAAATTCAGCTAAAAACTAAAAGTGTACAAGATTTTGAGACCATTTG
15746607 AAAAAA
1 AAAAAA
15746613 GTGTCCCCAT
Statistics
Matches: 51, Mismatches: 4, Indels: 1
0.91 0.07 0.02
Matches are distributed among these distances:
49 38 0.75
50 13 0.25
ACGTcount: A:0.48, C:0.11, G:0.13, T:0.28
Consensus pattern (50 bp):
AAAAAAATTCAGCTAAAAACTAAAAGTGTACAAGATTTTGAGACCATTTG
Found at i:15747867 original size:25 final size:26
Alignment explanation
Indices: 15747824--15747875 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
15747814 CCATCCCTAT
*
15747824 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15747850 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15747875 C
1 C
15747876 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 17 0.68
26 8 0.32
ACGTcount: A:0.27, C:0.21, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15748731 original size:26 final size:26
Alignment explanation
Indices: 15748702--15748751 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
15748692 CCAGTCCGAT
15748702 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
15748728 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
15748752 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.22, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:15749307 original size:882 final size:886
Alignment explanation
Indices: 15745227--15749448 Score: 3449
Period size: 907 Copynumber: 4.7 Consensus size: 886
15745217 GTGCTAACGC
** *
15745227 AACCCTCGGTCCAGTCTGATCATT-GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
1 AACCCTCGGTCTGGTCTGATC-TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAA
* * * * *
15745291 ACAAGCGGGGGACTGAGCAGGCGGGCACTACACCGGCCAGAGAGACAGGATGCGTAAGCCGTGGA
65 ACGAGCGGGCG-C-G-GCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCGCAAGCCGTGGA
*
15745356 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA-TTTTATG
126 TCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
* * * * *
15745420 GTTTGTAAAGTCATACAATGGTCCC-TAAGCC-TCACG-GAAGGTTTCATGCCCAAGACGACTCG
191 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTCATG-GCAAGACGACTCA
* * * * * **
15745482 TTTTCTATTTTTCACGA-TTTTCAAAAGTTTTTACGGTTCGGGATTTTTTAACATTTTTTTGGAA
255 TTTTCTATTTTTCATGATTTTTCAAAACTTTTTGCGGTT-GAGATTTTTTAAAATTTTTTCAGAA
* * * * * **
15745546 GGAGTTTTGGCCCCCAAACATGGTAGACCTGATCCTTCTATTTTTGTTGGTGTGCACAAAAAAAT
319 GGATTTTTGGCCCCC-AACTTGGTAGACGTGATCCTTGTA-TTTTCTTGGCATGCACAAAAAAAT
* * * * *
15745611 TCAGGTAAAAACTCAAAGTGTACAAGATTTCGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
382 TCAGCTAAAAAATCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * * * *
15745676 ACTTTAATTGCTACTGGTAACAAAACTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCA
447 ACTTTAATGGCTACT-GCAGCAAACCTGTAAAATCTC-AATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
15745741 CGAGGATT-GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
510 TGAGG-TTGGA-GAGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * *
15745805 GTGAGTACACACCCCCCGTGGCCCCCTCGATCACCCAAACCCCAAATG-C-CGTCAGTCAGGTTC
573 GT--GCACACACCTCCC--GACCCCCCCGACCATCGAAACCCC-AATGCCACG-CAGTCA-GTTC
* * * * * * *
15745868 TCCGGTGATGCTTCGACGATGGTGCCTCGGTGA-AGAAAAATG-CGGCACCAACACATGCCCAAG
631 T-CTGCGA-GC-TCGATG--GGTGCC-CCGTGAGAAAAAAATGAC-AC-CCAACACA-GCCCGAG
* * * * * *
15745931 CCCAGCATGTGCTA-C-CGTAACCCTAGGTCCGGT-CTGATCTTAGACTGGGAATGAACTCCGTA
687 CCCAGCATGTGCTAGCGCGCAAACCTCGATCC-ATCCCGATCTTAGACTGGGAATGAACTCCGTA
* *
15745993 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGTGCTCA
751 CGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT--GGG-GCTCA
* * * * ** *
15746058 GCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGTGTGCTGCCGAT
813 GCCAGCCAGAGGGGCTGGATGCGCAAGCTGGGGATCGGCAGGGTCCCCCTCTGCATGCTACCGAT
* *
15746123 CCTACTACCAC
878 CCTAC-AGC-T
* * * *
15746134 AACCCTCGGTCTAGTCTGATCTTATATTGGGAATGAACAT-CGTATGCCTAAGCCAACCGACGAA
1 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGCCAACCGATGAA
* *
15746198 ACGAGCAAGCAGGCG-GGTGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
65 ACGAGC--G--GGCGCGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCGCAAGCCGTGG
* * * * * *
15746262 ATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTATGCATACCAATGCCATTTTTAT
125 ATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
* *
15746327 GGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTGATGGCAAGACGACTCA
190 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTCATGGCAAGACGACTCA
* * * * *
15746391 TTTT-TATTTTTCACGA-TTTTCAAAAGTTTTTGCTGTTCGAGATTTTTTAACATATTTTT-GGA
255 TTTTCTATTTTTCATGATTTTTCAAAACTTTTTGCGGTT-GAGATTTTTTAAAAT-TTTTTCAGA
* * * * *
15746453 AAGAGTTTTGG-CCCAAACTTGGTAGATGT-ATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
318 AGGATTTTTGGCCCCCAACTTGGTAGACGTGATCCTTGTA-TTTTCTTGGCATGCACAAAAAAAT
* * * ** *
15746516 TCAGCTAAAAACTTGAAT-TGTACAAGATTTTGTG-CCATTTGAAAAAAAT-T---CAGCT-AAA
382 TCAGCTAAAAAATCG-ATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* ** * * * *** * * * * *
15746574 AACTAAAAGTGTACAAGATTTTG-AGACCATTTGAAAAAAGTGTCCCCATTTCAGTCACTTTAAT
446 CACTTTAA-TG-GCTA-CTGCAGCAAACC---TG-TAAAA---T-CTCA-AT--G-CTCTTTAA-
* ** * ** * * *
15746638 GGCTGCTGGCAGCAAACCTG-GTAAAATCTCAAATGCTCTTTA-AGGGGGTGGGAGTTCTTCGAG
495 GG--G--GG-TG------TGAGT----TCT-TGA-GGT-TGGAGA-GGGATAGG-GTGC--C-A-
* * * * * * * **
15746701 GTTTGATGAGGGATAGGGGCCAATATAAGGCTAAGCACCGA-GGC-CACCAT-CGCACATCATGT
536 -----AT-----ATAAGGGCCAA-GT-A--C-CAGCACCCATCGCACATCATGTGCACA-CACCT
* * * * *
15746763 GCGCACCACACCCCTGGCCGCCCGATCGTCGGAACCCCAAATGCCA-TCAGT-AG-TCTGT-CGG
585 -C-C-CGAC-CCCC---CCGACC-A---TCGAAACCCC-AATGCCACGCAGTCAGTTCTCTGC-G
* * * * * *
15746824 ATGCTCCGACGATGGTGCCACGT-TGAAGAAAATG-CAGACCAACACATGCTCGAGCCCAGCATG
637 A-GCT-CGATG--GGTGCCCCGTGAGAAAAAAATGACA-CCCAACACA-GCCCGAGCCCAGCATG
* * * * * *
15746887 TGCT--C-CACAACCCTCGGTCCGT-CTGATCTTAGAC---GAAT---CT---TA----T-GATT
696 TGCTAGCGCGCAAACCTCGATCCATCCCGATCTTAGACTGGGAATGAACTCCGTACGCTTAGACT
* *
15746934 GGGAATGAACTCCGTATGCCTAAGTCAA-CCACGAAATGAGCGGTGGGGCTCAGCCGGCCAAGAG
761 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGGGGCTCAGCCAGCC-AGAG
* * * *
15746998 GGGCGGGATGCGCAAGC-CGGGATCGGCCAGTGTCCCCCT-TGCATGCTACTAGATCCTAC-GCT
824 GGGCTGGATGCGCAAGCTGGGGATCGG-CAGGGTCCCCCTCTGCATGCTAC-CGATCCTACAGCT
* * *
15747060 CAACCCTCGGTCTGGTCTGATCTTATACTGGGAATGAACTTCGTATGCCTAAGCCATACCGACGA
1 -AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA-ACCGATG-
* * * * *
15747125 AAACGAGCGAGCAAACGGGCGGGCGGGCACTACCGCCAGCCAGAGAGACGGGATGCGTAAGCCAT
63 AAACGAGCGGGC--GC-GGCGGGCGGGCACTA-CGCCGGCCAGAGAGAC-GGATGCGCAAGCCGT
* * *
15747190 TGATCCGAATA-GGTGGTAGGTGGGTTTACGCACATCTTTATATTTCTACGTGCCCAATGCCATT
123 GGAT-C-AATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTG-CCAATGCCATT
*
15747254 TTTATGGCTTGTAAATTCATAACAATGGTCCCTTATGCCTTCACCGTGAAGTTTTCATGCGCAAG
185 TTTATGGCTTGTAAATTCAT-ACAATGGTCCCTTAAGCCTTCA-CGTGAAGTTTTCATG-GCAAG
* * **
15747319 ACGACTCGTTTTTCTATTTTTTCACGAGTTTTTGGAAACTTTTTGCGGTTGGAGATTTTTTTTAA
247 ACGACTC-ATTTTCTA-TTTTTCATGA-TTTTTCAAAACTTTTTGCGGTT-GAGA--TTTTTTAA
* *
15747384 ATTTGTGTTTTCAGAAGGAGTTTTTTGGCCCCCAACTTGGTAGGACGTGATCCTTGTATTTTGGT
306 A-AT-T-TTTTCAGAAGGA--TTTTTGGCCCCCAACTTGGTA-GACGTGATCCTTGTATTTT-CT
* * * *
15747449 TGGCATGCCCAAAAAAATTCAGCT--AAACTCGATGTGTACCAAGATTTTGTGACCATTCGGAGA
364 TGGCATGCACAAAAAAATTCAGCTAAAAAATCGATGTGTA-CAAGATTTTGTGACCATT-TGAAA
* * * *
15747512 AAAGTGTCCCAATTTCAGACACTTTAATGGCTACAGGCAGCAAACCTGGAAAATCTGAAATGCTC
427 AAAGTGTCCCCATTTCAGACACTTTAATGGCTAC-TGCAGCAAACCTGTAAAATCT-CAATGCTC
*
15747577 TTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA-GGTGGCCAATA-AGAGGGCCAAGTA
490 TTTAAGGGGGTGTGAGTTCTTGAGGTTGGA-GAGGGATAGGGT-GCCAATATA-AGGGCCAAGTA
* * *
15747640 CCAGCACCCATCACACATCATGTACGCACACCTTGCCCGACCCCCCCGACCATCGAAACCCCAAT
552 CCAGCACCCATCGCACATCATGTGCACACACC-T-CCCGACCCCCCCGACCATCGAAACCCCAAT
* * *
15747705 GCCGCGCCGTCAGTTCTCTGGCGATGCTCCGACAGATGGGTGCCCCGTGAGAAAAATATGACACC
615 GCCACGCAGTCAGTTCTCT-GCGA-GCT----C-GATGGGTGCCCCGTGAGAAAAAAATGACACC
* * * *
15747770 CAACACATCCCGAGCCTAGCATGTGCTAGCGCGCAACCCTCGATCCATCCCTATCTTAGACTGGG
673 CAACACAGCCCGAGCCCAGCATGTGCTAGCGCGCAAACCTCGATCCATCCCGATCTTAGACTGGG
* * *
15747835 AATTAACTCCGTATGCTTAGACT-GGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGC
738 AATGAACTCCGTACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
*
15747899 GTAAAGGGCGCTCAG-CAGGCC-GAGGGG-TGGGACTGCGCAAG-TCGGGGATCGGCCGGGTCCC
803 GT---GGG-GCTCAGCCA-GCCAGAGGGGCT-GGA-TGCGCAAGCT-GGGGATCGGCAGGGTCCC
*
15747960 CCTCTGCGTGCTACCGAT-CTAGCAGC-
860 CCTCTGCATGCTACCGATCCTA-CAGCT
* *
15747986 AA-CC-CGGTCCGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCCGATGAA
1 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-CCGATGAA
* * * * *
15748049 ATGAGCGGGCGCGGGGGGCGGGCACTACGCCTGGCCAGAGAGACGGATGCGCAAACTGTGGATCG
65 ACGAGCGGGCGCGGCGGGCGGGCACTACGCC-GGCCAGAGAGACGGATGCGCAAGCCGTGGATCA
* * *
15748114 ATAGGGTGGTA-GTGGGTTTTAGGCACATCTTCA-ATTTCTGCTTTCCCAATGCCATTTTTATGG
129 ATAGGGTGGTAGGTGGG-TTTAGGCACATCTTCATATTTCTAC-GTGCCAATGCCATTTTTATGG
* * *
15748177 CTTGTAAATTCATTACAATGGTCCCATATAGCCTTCACGTGAAGTTTTCATGCCAAGACGACTCG
192 CTTGTAAATTCA-TACAATGGTCCCTTA-AGCCTTCACGTGAAGTTTTCATGGCAAGACGACTCA
** *
15748242 TTTTCTATTTTTCATGATTTTTTTTAAACTTTTTGCGGTTGGGATTTTTTAAAA-TTTTTCAGAA
255 TTTTCTATTTTTCATGA-TTTTTCAAAACTTTTTGCGGTTGAGATTTTTTAAAATTTTTTCAGAA
* * *
15748306 GGAGTTTT-GCCCCCAACTTAGTAGACGTGATCCTTGTATTTTTTTTGGCCATGCACAAAAAAAT
319 GGATTTTTGGCCCCCAACTTGGTAGACGTGATCCTTGTA-TTTTCTTGG-CATGCACAAAAAAAT
*
15748370 TCAGCTAAAAAACTCGATGGGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGA
382 TCAGCTAAAAAA-TCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
15748434 CACTTTAATGGCTACTGCAGCAAACCTGTAAAGTCTCAATGCTC-TTAA-GGGGTGTGAGTTTTT
446 CACTTTAATGGCTACTGCAGCAAACCTGTAAAATCTCAATGCTCTTTAAGGGGGTGTGAGTTCTT
*
15748497 GAGGTTGGGAGAGGGATAGGGTGCCAATATAA-GGCCACA-TACAAGCA-CCATCGCACATCATG
511 GAGGTT-GGAGAGGGATAGGGTGCCAATATAAGGGCCA-AGTACCAGCACCCATCGCACATCATG
* * * * * *
15748559 TGCACACACC-CCTCG-GCCCCCTGACGA-CGGAGCCCCAATG-CAC-TAGTCAAG-T-TCT-CG
574 TGCACACACCTCC-CGACCCCCCCGACCATCGAAACCCCAATGCCACGCAGTC-AGTTCTCTGCG
* *
15748616 -G-T-GAT-GGTGCCCCG-GAGAAGAAAAATG-CGACACTAACACAGGCTCGAGCCCAGCATGTG
637 AGCTCGATGGGTGCCCCGTGAGAA-AAAAATGAC-AC-CCAACACA-GCCCGAGCCCAGCATGTG
15748675 CT-GC-CGCAAACCTC-AGTCCAGT-CCGATCTTAGACTGGGAATGAACTCCGTACGCTTAGACT
698 CTAGCGCGCAAACCTCGA-TCCA-TCCCGATCTTAGACTGGGAATGAACTCCGTACGCTTAGACT
15748736 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGATGCTCAGCCAGCCAGA
761 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG-GG--GCTCAGCCAGCCAGA
** * * * *
15748801 GGGGCTGGATGCGCAAGCTGGGGATCGGTTGGGTCCTCCTCTGCATACTGCCGATCCTACTACCA
823 GGGGCTGGATGCGCAAGCTGGGGATCGGCAGGGTCCCCCTCTGCATGCTACCGATCCTAC-AGC-
15748866 T
886 T
* * * *
15748867 AACCCTCGGTCTGGTCTAATCCTAGA-TAGAGAATGAACTCCATATGCCTAAGCCAACCGATGAA
1 AACCCTCGGTCTGGTCTGATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCAACCGATGAA
* * *
15748931 ACGAGCGGGCGGGCGAGTGGGCGGGCACTACGTCGGCCAGAAAGACAGGATGCGCAAGCCGTGGA
65 ACGAGCGGGC--GCG-GCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCGCAAGCCGTGGA
*
15748996 TCAATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
126 TCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
*
15749061 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGATGACTCAT
191 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTCATGGCAAGACGACTCAT
* * *
15749125 TTTCTATTTTTCATGA-TTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGCAG
256 TTTCTATTTTTCATGATTTTTCAAAACTTTTTGCGGTT-GAGATTTTTTAAAATTTTTTCAGAAG
** ***
15749189 GATTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTACTTTTCTTGGCATGCACAAAAATCCTC
320 GATTTTTGGCCCCCAACTTGGTAGACGTGATCCTTGTA-TTTTCTTGGCATGCACAAAAAAATTC
* * * *
15749254 AGCTAAAAAATCGAAGTGTACAAGTTTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTTAGACAC
384 AGCTAAAAAATCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
*
15749319 TTTAATGGCTACTGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
449 TTTAATGGCTACTGCAGCAAACCTGTAAAATCTC-AATGCTCTTTAAGGGGGTGTGAGTTCTTGA
* *
15749384 GGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
513 GG-TTGGAGAGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
15749449 GCAAATGAAC
Statistics
Matches: 2724, Mismatches: 351, Indels: 500
0.76 0.10 0.14
Matches are distributed among these distances:
876 1 0.00
877 9 0.00
878 114 0.04
879 72 0.03
880 36 0.01
881 41 0.02
882 149 0.05
883 99 0.04
884 32 0.01
885 133 0.05
886 27 0.01
887 18 0.01
888 2 0.00
890 3 0.00
891 4 0.00
892 4 0.00
893 11 0.00
894 11 0.00
895 2 0.00
897 22 0.01
898 12 0.00
899 44 0.02
900 23 0.01
901 22 0.01
902 40 0.01
903 79 0.03
904 30 0.01
905 85 0.03
906 61 0.02
907 181 0.07
908 109 0.04
909 46 0.02
910 39 0.01
911 21 0.01
912 7 0.00
913 41 0.02
914 8 0.00
915 11 0.00
916 77 0.03
917 32 0.01
918 20 0.01
919 27 0.01
920 1 0.00
922 13 0.00
923 81 0.03
924 18 0.01
925 17 0.01
926 31 0.01
927 89 0.03
928 48 0.02
929 68 0.02
930 45 0.02
931 69 0.03
932 35 0.01
933 23 0.01
934 9 0.00
935 6 0.00
936 14 0.01
937 4 0.00
938 4 0.00
939 13 0.00
940 2 0.00
941 21 0.01
942 5 0.00
943 22 0.01
944 7 0.00
945 28 0.01
946 29 0.01
947 30 0.01
948 28 0.01
949 45 0.02
950 24 0.01
951 40 0.01
952 12 0.00
953 19 0.01
954 1 0.00
955 3 0.00
956 8 0.00
957 7 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (886 bp):
AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAA
CGAGCGGGCGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGATGCGCAAGCCGTGGATCAAT
AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTG
TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTCATGGCAAGACGACTCATTTTCT
ATTTTTCATGATTTTTCAAAACTTTTTGCGGTTGAGATTTTTTAAAATTTTTTCAGAAGGATTTT
TGGCCCCCAACTTGGTAGACGTGATCCTTGTATTTTCTTGGCATGCACAAAAAAATTCAGCTAAA
AAATCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
GCTACTGCAGCAAACCTGTAAAATCTCAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTGGAG
AGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACACCTC
CCGACCCCCCCGACCATCGAAACCCCAATGCCACGCAGTCAGTTCTCTGCGAGCTCGATGGGTGC
CCCGTGAGAAAAAAATGACACCCAACACAGCCCGAGCCCAGCATGTGCTAGCGCGCAAACCTCGA
TCCATCCCGATCTTAGACTGGGAATGAACTCCGTACGCTTAGACTGGGAATGAACTCCGTATGCC
TAAGTCAACCCACGAAACGAGCGTGGGGCTCAGCCAGCCAGAGGGGCTGGATGCGCAAGCTGGGG
ATCGGCAGGGTCCCCCTCTGCATGCTACCGATCCTACAGCT
Found at i:15753063 original size:26 final size:26
Alignment explanation
Indices: 15753034--15753086 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15753024 GTTGACTTAG
*
15753034 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15753060 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15753086 G
1 G
15753087 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15754649 original size:26 final size:26
Alignment explanation
Indices: 15754620--15754672 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15754610 GTTGACTTAG
15754620 GCATACGGAGTTCATTCACAGTCTAA
1 GCATACGGAGTTCATTCACAGTCTAA
*
15754646 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCACAGTCTAA
15754672 G
1 G
15754673 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCACAGTCTAA
Found at i:15756527 original size:159 final size:158
Alignment explanation
Indices: 15756227--15756595 Score: 524
Period size: 159 Copynumber: 2.3 Consensus size: 158
15756217 CCCGCCCGTC
* **
15756227 CGCTCGTTTCGTTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTG
1 CGCTCGTTTCG-TGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCA
* * * * *
15756292 AGGGTTGCAGCAGCAGGATCGACAGTACGCAGAGGGGGACCCGATCGATCCCTGGCTTGTGCATC
65 AGGGTTACAGCAGCAAGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATC
* *
15756357 CCGCCCTTCTGGCCGGCTGAGCACCCGCA
130 CCACCCCTCTGGCCGGCTGAGCACCCGCA
* * * * *
15756386 TGTTCGTTTCGCTGGTTGACTTGGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCA
1 CGCTCGTTTCG-TGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCA
* * *
15756451 AGGGTTACGGCAGCAAGATCGATAGCACGTAGAGGGGGACCC-ATTCGATCCCCGGCTTGCGCAT
65 AGGGTTACAGCAGCAAGATCGACAGCACGCAGAGGGGGACCCGA-TCGATCCCCGGCTTGCGCAT
*
15756515 CCCACCCCTCTGGTCGGCTGAGCACCCGCA
129 CCCACCCCTCTGGCCGGCTGAGCACCCGCA
15756545 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
1 CGCTCGTTTCGT-GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
15756596 CATACGGAGT
Statistics
Matches: 185, Mismatches: 23, Indels: 4
0.87 0.11 0.02
Matches are distributed among these distances:
158 2 0.01
159 183 0.99
ACGTcount: A:0.20, C:0.29, G:0.28, T:0.23
Consensus pattern (158 bp):
CGCTCGTTTCGTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCAA
GGGTTACAGCAGCAAGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCC
CACCCCTCTGGCCGGCTGAGCACCCGCA
Found at i:15756605 original size:26 final size:26
Alignment explanation
Indices: 15756569--15756621 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15756559 GTTGACTTAG
15756569 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
15756595 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15756621 G
1 G
15756622 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15757457 original size:26 final size:26
Alignment explanation
Indices: 15757428--15757477 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15757418 GGTTACTTAG
15757428 GCATACGGAGTTCATTCCCAGTCTGA
1 GCATACGGAGTTCATTCCCAGTCTGA
*
15757454 GCATACGGAGTTCATTCTCAGTCT
1 GCATACGGAGTTCATTCCCAGTCT
15757478 AAAATCAGAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.22, C:0.26, G:0.22, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTGA
Found at i:15758177 original size:860 final size:873
Alignment explanation
Indices: 15756510--15759077 Score: 3495
Period size: 860 Copynumber: 2.9 Consensus size: 873
15756500 CCCCGGCTTG
* * * *
15756510 CGCATCCCACCCCTCTGGTCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
1 CGCATCCCGCCCCTCTGGCCGGCTGAGCAGCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATAC
*
15756575 GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC-CTAGTCTAAGATCGGATCGGACCGAGG
66 GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTC-AGTCTAAGATCAGATCGGACCGAGG
* * *
15756639 GTTGCGATAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGAGGCACCA
130 GTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA
* * *
15756704 TCGTCGAAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGTCGGG
195 TCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGAGGGGCCGGG
* * * * * **
15756769 GGGTCTGCGCACATTATTTGCGATGCGTGCTGGTACTTGGCCCTTATATTGACCCCCTATCCCTC
260 GGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCCCTC
*
15756834 ATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACTA-GTTT-CTGCCAGT
325 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC-AGGTTTGCTGCCAGT
* * * *
15756897 AGCCATTAAAGTGTCCGAAATGGGTACAC-TTTTTCAATTGGACACAAAATCTTGTACACTTCGA
389 AGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
* * * * *
15756961 GCTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATATAGGGATCACGGCTACCAAGTTTGGG
454 GTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACA-AGATCACGTCTACCAAGTTTGGG
* *
15757026 GCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCAAATCCCAAAAAGTTTCAAAAATCATGAA
518 GCCAAAACTCC-TTCGAAAAAATTTTAAAAAATCCCGAA-CCCAAAAAGTTTCAAAAATCGTGAA
15757091 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
581 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
* * *
15757156 TTACAAGCCATAAAACTGGCATTGGCATGTATAAATATGAAGATGTGCCTAAACCCACCTACCAC
646 TTACAAGCCATAAAAATGGCATTGGCACGTAAAAATATGAAGATGTGCCTAAACCCACCTACCAC
** * * * * *
15757221 CCTATCGATCCACGGCTTGATCATCCCGTCTCTCTGGCCGGTGTAGTGCCCACCCGCCCGCCTGC
711 CCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCC-GCGTAGAGCCCGCCCGCCCGCCCGC
* * * *
15757286 ACTTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTTAGATCAAATCAGACCG-A-
775 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCGAAG
15757349 G-GGT-T-GC-G-GC-A-GA-A-GAT-C-GG-TA
840 GTGGTATCGCAGCGCAAGGACACGATCCTGGCTA
* ** * *
15757371 -GCATCCTGCCCCTCTGGCCGGCTGAGCAGCATCACGCTCATTTTATGGGTT-ACTTAGGCATAC
1 CGCATCCCGCCCCTCTGGCCGGCTGAGCAGCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATAC
* * * *
15757434 GGAGTTCATTCCCAGTCTGAGCATACGGAGTTCATTCTCAGTCTAAAATCAGACCAGACCGAGGG
66 GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTCAGTCTAAGATCAGATCGGACCGAGGG
* *
15757499 TTGCGGTTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCAT
131 TTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAT
* *
15757564 CGTCGGAGCATCACCGGAGAACCTGACCGATGGCATTGGGGTTCCGACGATCGGAGGGGCCGGGG
196 CGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGAGGGGCCGGGG
*
15757629 GGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGACCCTTATATTGGGCACCCTATCCCTC
261 GGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGGC-CCCTATCCCTC
* *
15757694 ATCAAACCTCGAGAACTCACACCCCCTTAAGGAGCATTCGAGATTTTACAGGTTTGCTGCCAGTA
325 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
*
15757759 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTATACACTTCGAG
390 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
* *
15757824 TTTTTGGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGAT-ACGTCTACCAAGTTTAGGGC
455 TTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGATCACGTCTACCAAGTTTGGGGC
*
15757888 CAAAACTCCTTCCAAAAAATTTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAA
520 CAAAACTCCTTCGAAAAAA-TTTTAAAAAATCCCGAACC-CAAAAAGTTTCAAAAATCGTGAAAA
* * * *
15757953 ATAGAAAACGAGTTGTCTTGCCAAGAAACTTCATGTGATGGCTTAAGGGACCATTGTATGAATTT
583 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* * *
15758018 ACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCTACCTACCACCA
648 ACAAGCCATAAAAATGGCATTGGCACGTAAAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* *
15758083 TATCGATCCACGACTTGCGCATCCTGTCTCTTTGGCCAGCGTAGAGCCCGCCCGCCCGCCCGCTC
713 TATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCC-GCGTAGAGCCCGCCCGCCCGCCCGCTC
* *** *
15758148 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATTGGACCATACCGAAGGT
777 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCGAA-G-
15758213 TGTGGTAGCAGGATCGGCAGCACGCAGAGGGGGACTCGATCGATCCCTGGCTTA
840 -GTGGT------ATC-GCAG--CGCA-A---GGA--C-A-CGAT-CCTGGC-TA
** *
15758267 CGCATCCCGCCCCTCTGGCCTACTAAGC-GCCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATA
1 CGCATCCCGCCCCTCTGGCCGGCTGAGCAG-CCGCACGCTCGTTTTGTGGGTTGACTTAGGCATA
* *
15758331 CGGAGTTCATTCCCAGTCTAAGAATACGGAGTTCATTACT-AGTCTAAGATCAGATTGGACCGAG
65 CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT-CTCAGTCTAAGATCAGATCGGACCGAG
* * * *
15758395 GGTTGCGGCAGCACATGCTGGGCTCGAGCATTTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACC
129 GGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACC
* * ** * * *
15758460 ATTGCCGGAGCATCGCCGGAGAACCTGACCGACAACATTGTGGTTCTGGCGATC-GATGGGGCCG
194 ATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGA-GGGGCCG
* *
15758524 GGGGGTGCGTGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCCC
258 GGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCCC
*
15758589 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAG
323 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
15758654 TAGCCATTAAAGTGTCTGAAATGGGGACA-TTTTTTCAAATGGTCACAAAATCTTGTACACTTCG
388 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCG
* *
15758718 ACTTTTTAGCTGAATTTTTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG
453 AGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA-GATCACGTCTACCAAGTTTGG
* **
15758783 GGCCAAAA---C-T-GAAAAAATTTTAAAAAATCCTGAACCACAAAAAGTTTTGAAAATCGTGAA
517 GGCCAAAACTCCTTCGAAAAAATTTTAAAAAATCCCGAACC-CAAAAAGTTTCAAAAATCGTGAA
* * *
15758843 AAATAGAAAACGAGTCATCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTAAGAAT
581 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
*
15758908 TTACAAGCCATAAAAATGGCATTGGCACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCAC
646 TTACAAGCCATAAAAATGGCATTGGCACGTAAAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * *
15758973 CCTATTGATCCACGGCTTGCGCAT-CTCGCCCCTCTGGCCGAC-T-GA----G--CGCCCGCACG
711 CCTATCGATCCACGGCTTGCGCATCCT-GTCTCTCTGGCCG-CGTAGAGCCCGCCCGCCCGCCCG
* * *
15759029 CTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
774 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
15759078 CATACGGAGT
Statistics
Matches: 1511, Mismatches: 144, Indels: 81
0.87 0.08 0.05
Matches are distributed among these distances:
859 247 0.16
860 398 0.26
861 39 0.03
862 69 0.05
865 1 0.00
866 3 0.00
873 1 0.00
875 2 0.00
876 1 0.00
879 2 0.00
881 1 0.00
884 54 0.04
885 2 0.00
886 1 0.00
889 1 0.00
890 2 0.00
891 7 0.00
892 190 0.13
893 7 0.00
894 3 0.00
895 1 0.00
896 77 0.05
897 146 0.10
898 254 0.17
899 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (873 bp):
CGCATCCCGCCCCTCTGGCCGGCTGAGCAGCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATAC
GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTCAGTCTAAGATCAGATCGGACCGAGGG
TTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAT
CGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGAGGGGCCGGGG
GGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCCCTCA
TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
TTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGATCACGTCTACCAAGTTTGGGGCC
AAAACTCCTTCGAAAAAATTTTAAAAAATCCCGAACCCAAAAAGTTTCAAAAATCGTGAAAAATA
GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
AGCCATAAAAATGGCATTGGCACGTAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
CGATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGCGTAGAGCCCGCCCGCCCGCCCGCTCGTTT
CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCGAAGGTGGTA
TCGCAGCGCAAGGACACGATCCTGGCTA
Found at i:15758364 original size:26 final size:26
Alignment explanation
Indices: 15758328--15758379 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
15758318 TGACTTAGGC
*
15758328 ATACGGAGTTCATTCCCAGTCTAAGA
1 ATACGGAGTTCATTACCAGTCTAAGA
*
15758354 ATACGGAGTTCATTACTAGTCTAAGA
1 ATACGGAGTTCATTACCAGTCTAAGA
15758380 TCAGATTGGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.33, C:0.19, G:0.19, T:0.29
Consensus pattern (26 bp):
ATACGGAGTTCATTACCAGTCTAAGA
Found at i:15759081 original size:26 final size:26
Alignment explanation
Indices: 15759051--15759103 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15759041 GTTGACTTAG
15759051 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15759077 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15759103 G
1 G
15759104 ATTGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15761767 original size:26 final size:26
Alignment explanation
Indices: 15761731--15761780 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
15761721 GTTGACTTAG
15761731 GCATACGGAGTTCATTCCCAGTCTCA
1 GCATACGGAGTTCATTCCCAGTCTCA
15761757 GCATACGGAGTTCATTCCCAGTCT
1 GCATACGGAGTTCATTCCCAGTCT
15761781 AAGATCCGAC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.22, C:0.30, G:0.20, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTCA
Found at i:15763565 original size:26 final size:26
Alignment explanation
Indices: 15763526--15763578 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15763516 GTTGACTTAG
* *
15763526 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
15763552 GCATACGAAATTCATTCCCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
15763578 G
1 G
15763579 ATCAGAATGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAATTCATTCCCAGTCTAA
Found at i:15764440 original size:26 final size:26
Alignment explanation
Indices: 15764410--15764462 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15764400 GTTGACTTAG
15764410 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15764436 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15764462 G
1 G
15764463 ATCGGACCGA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15765343 original size:26 final size:26
Alignment explanation
Indices: 15765307--15765359 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15765297 GTTGACTTAG
15765307 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15765333 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15765359 G
1 G
15765360 ATCAGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15766234 original size:26 final size:26
Alignment explanation
Indices: 15766198--15766250 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15766188 GTTGACTTAG
*
15766198 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATAGGGAGTTCATTCCCAGTCTAA
15766224 GCATAGGGAGTTCATTCCCAGTCTAA
1 GCATAGGGAGTTCATTCCCAGTCTAA
15766250 G
1 G
15766251 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATAGGGAGTTCATTCCCAGTCTAA
Found at i:15767442 original size:897 final size:897
Alignment explanation
Indices: 15759949--15777646 Score: 20731
Period size: 902 Copynumber: 19.9 Consensus size: 897
15759939 GTTGACTTAG
* * * *
15759949 GCATACGGAGTTCATTCCCAGTCTAAG--CATA-CAGACTGAGGGATGCGGCTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
15760011 CTCGGGCATGTGTTGGTGCCGCAGTTTTT-TTCGTCGGGGCACCATCGCCGGAGCATTGCCGGAG
66 CTCGGGCATGTGCTGGTGCCGCA-TTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAG
* * * *
15760075 AA-CTGGACCGACGGCATTAGGGTTCCGACGATCGGGGAAGTCGAGGGGGGTGTCCGCACATGAT
130 AACCT-GACCGACGGCATTGGGGTTCCGACGATCGGGG--GGC-CGGGGGGTGTGCGCACATGAT
* * * *
15760139 GGGCGATGGGTGCT-ATACTTGGACCTTATATTGGCCCCCTATCCCTCATCAAACCTCTAGAACT
191 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
15760203 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGATTTGCTGCCAGTAGCCATTAAAGTTTTTGA
256 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* **
15760268 AATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGTTTTTTT
321 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * *
15760333 TTGTGCATGCCAAAAAAAATACAAGGATTACATCTACCAAGTTTGGGACCAAAACTCCTTCTGAA
386 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * *
15760398 AAAATTTTAAAAAATCTCAAACCGTAAAAAGTTTCAAAAAT-AGTGAAAAATAGAAAACAAGTCG
451 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCA-TGAAAAATAGAAAACGAGTCG
* *
15760462 TCTTGCCATGAAACTTCACATGAAGGCTTCAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
515 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
15760527 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
580 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
** * *
15760592 TGCGCATCCTATCTCTCTGGCCG-GGTAGTGCCCGCCCGCCCGCTCGCCTGCTCATTTCGTCGGT
645 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG--C-CC-GCTCGTTTCGTCGGT
* * * * ** * *
15760656 TCGCTTAGGCATACAGAGTTTATTCCCAGTCTAAGAT-TGAACCGGATTGAGGGTTGTGACAGCA
706 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACCGAGGGTTGCGGCAGCA
*
15760720 GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTAG-GCATCCCGCCCCTCTGGCC
770 GGATCGGCAGCACGCAGAGGGGGACCCG-TCGATCCCCGGCTT-GCGCATCCCGCCCCTCTGGCC
* * *
15760784 GACTGAGTGCCCGCACGCTCGTTTCGTGGGTTGACTTAGCCATACGGAGTTCATTCCCAGTCTAA
833 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * ** *
15760849 G-ATATGAAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTTCGATAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
15760913 CTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * *
15760978 ACCTGACCGGCAGCATTAGGGTTCTGACGATCGGGGGGCCCGAGGGGGTGTGCGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGG-CCG-GGGGGTGTGCGCACATGATGTG
* *
15761043 CGATGGGTGTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
15761108 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
15761173 -GGGACACTTTTTTCAAATGGTCACAAAAAGTCTTGTACACATCGAGTTTTTAGCTGAATTGTTT
324 GGGGACACTTTTTTCAAATGGTCAC-AAAA-TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
*
15761237 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCCAAA
387 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * *
15761302 AAATTTTTAAAAAATCCCAAACCGCAGAAAGTTTTTCAAAAATCATTGAAAAATAGGAAAATGAG
452 AAA-TTTTAAAAAATCCCGAACCGTAAAAAG--TTTCAAAAATCA-TGAAAAATA-GAAAACGA-
** **
15761367 GTTATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATCATATGGAATTTACAAGCCAT-
511 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT-GAATTTACAAGCCATA
* * *
15761431 AAAATGGCA-T-GCGAAGCA-AAATATGAAGAGGTGCCTAAACCCACCTACCA-CATATCGATCC
575 AAAATGGCATTGGC-ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * * *
15761492 ACGGCTTGCCGCATCCTTGTCTCTCTGGTCGGCGTAGTGCCCGCCCG---GCCAC-TTCATTTTC
639 ACGGCTTG-CGCATCC-CGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCC-CGCTC-GTTTC
* * * * **
15761553 GTCGATTGGCTTTAGGCATACAGAGTTCATTCCCAGTCTAAGATTTAGCCCAGGACC-AATGTTG
700 GTCGGTTGGC-TTAGGCATACGGAGTTCATTCCCAGTCTAAGA-TCAGACC-GGACCGAGGGTTG
* * * * * * *
15761617 CGGCAGGCAGGATCGGGTAAGCATGTAGAGGGGGACCCGGCCGATCCCTGGCTTGCGTATCCCGT
762 CGGCA-GCAGGATC-GG-CAGCACGCAGAGGGGGACCC-GTCGATCCCCGGCTTGCGCATCCCGC
* * *
15761682 ACCTCTAGCCGGCTGAGCGCCCGCACTCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
823 CCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
*
15761747 CCCAGTCTCA
888 CCCAGTCTAA
* * *
15761757 GCATACGGAGTTCATTCCCAGTCTAAGATCCGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** ** * * *
15761822 ATTTGGCATGTATTGGTGCCGCAATTTTCTTCGTTGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
15761887 ACCTAACCGGCGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGTGTGTGCACATGATGTGT
131 ACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
15761952 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCGTCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
15762017 CCCCCTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * *
15762082 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACGCATCGAATTTTTAGCTGAA-TTATTTGT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
15762146 GCATGCCAA-AACAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
390 GCATGCCAACAA-AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * **
15762210 ATTTTAAAAATTCCCAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTT
454 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
15762275 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
15762340 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTGCG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * *
15762405 CATCTCGTCTCTCTGGTCGGCATAGTGCCCGCCTGCCCGCCCGCCCGTTCGTTTCATCGGTTGGC
649 CATCCCGTCTCTCTGGCCGACGTAGTG--C-CC-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGC
** * * * *
15762470 TTAGGCATACGGAGTTCATTCCCAGTAGAAGATTAGACCAGACCGAGGGTTGCTGTAGCAGGATC
710 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATC
* ** * * * * *
15762535 GGTAGCACGCAGAGGGGGAAACGACCAATCCCCGGCTTGTGCATCCCACCCCTCTGGCCAGCTGA
775 GGCAGCACGCAGAGGGGGACCCG-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * * ** *
15762600 GCGCCCGCACACTCATTTTGTGTGTTGACTTAGGCATACGGAGTTTGTTTCCAGTCTAA
839 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
15762659 CCATACAGAGTTCATTCCCAGTCTAAGATCCGACCGGACCAAGGG-TGACGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTG-CGGCAGCACATGCTGG
* ** * * * * ***
15762723 GATTTGACATGTGCTGGTGCTGCCTTTTTCTTCATCGGGGCACCATCGGCGGAGCATCATTGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAG
* * *
15762788 AACCTGACCGGCGGTATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTACGCACATGATGTG
130 AACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTG
* * * *
15762853 CGATAGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCCTCAAACCTTGGGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
15762918 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTTGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
15762983 TGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTGAGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * *
15763048 TGCGTGCCAACAAAATTTCAAGGATCACGTCTACCAA-TTTTGGGCCAAAAATCCTTCCGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * ** *
15763112 ATTTTAAAACATCCTGAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGAGTCGTCTT
454 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
** * *
15763177 GCCACAAAACTTCACGTCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATAGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
15763242 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACC-CCCTATCGATCCACGGCTCGCG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * *
15763306 CATCCTGTCTCTTTGGCCGGCGTAGT----GCCCGCCCGCTCGCTCATTTCGTCGGTTGGCTTAG
649 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * * * * * *
15763367 GCATACAGAGTTCATTCCCAATCTAAGATCAGATCGGACTGAAGGTTTCAGTAGCAGGATCGACA
714 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGCA
* * * * ** *
15763432 GCACGTAGAGGGGGACCCGACCGATCTCCAGCTTGCGCATCCCGCCCCTCTGGCCGATTGAGCAC
779 GCACGCAGAGGGGGACCCG-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
15763497 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *** * * *
15763552 GCATACGAAATTCATTCCCAGTCTAAGATCAGAATGGACCGAGGGCTGCAGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
15763617 CTCGGGCATGTGTTGGTGCTGCATTTTTCTTCACCGAGGCACCATCGT-----CA------GAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * *
15763671 ACCTGACCGGCGGCATTGAGGTTCCGATGATCGGGGGGGCCAGGGGGGTGTACGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCC-GGGGGGTGTGCGCACATGATGTG
*
15763736 TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
15763801 ACCCCCTTAAAGAGCATTTGTGATTTTACAAGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
15763866 GGGGACACTTTTTTCAAATGGTCGCAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * *
15763931 TGCATGCCAACAAAAATAAAAGGATCACATCTACCAAGTTTGGGGCCAAAATTCATTCCAAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* *
15763996 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
454 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
15764061 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * *
15764126 TTGGCACGTAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATCGATCCACAGCTTGCG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * *
15764191 CATCCCGTCTCTCTGGCCGAAGT--TG--TGCCCGCCCGCCCACTCGTTTCGTCGATTGGCTTAG
649 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * ** * * * *
15764252 CCATACGGAGTTCATTCCCAATCTAAAATTGGACCAGACCGAGGGTTACGGTAGCAGGATCGACA
714 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGCA
* * * * ** * * *
15764317 GCATGTAGAGGGGGACCCGGCAGATTCCTAGCTTGTGTATCCCGCCCCTC-GGCCAGCTGAGCGC
779 GCACGCAGAGGGGGACCCGTC-GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
*
15764381 CCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15764436 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACC-GAACCAAGGGTTACGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGCGGCAGCACATGCTGG
* * * *
15764500 G-TCCGAGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCGTCGGA
65 GCT-CGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGA
* * *
15764564 GAACCTGACTGGCGGCATTGGGGTTCCGGCGATCGAGGGGGCC-GGGGGTGTGCGCACATGATGT
129 GAACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGT
* *
15764628 GCGATGGGTGCTGGTACTTGGCTCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
15764693 CACCCCATTAAAGAGCATTTGAGATTTTACAAGTTTGCTGTCAGTAGCCATTAAAGTGTCTGAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
15764758 TGGGGACACTTTTTTCAAATGGTCACAAAAACTTGTACACTTCGATTTTTTTGCTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
15764823 ATGCATGCCAACAAAAATACAAGGATCACG--T-----GTAT---GCCAATACTCCTTCCGAAAA
388 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
** * * *
15764878 AATTAAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAATATATAAAACGAGT-GTCT
453 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* *
15764942 CGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
15765007 ATTGGCAT-CAGAAATATGAAGATTTGCCTAAACCCACCTACCACGCTATCGATCCACGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * * * * * *
15765071 GCATCCCATCTATGTGGTCGGCATAGTACCCGTCTGCCCGCCCGCTCGTTTCATCGGTTGGCTTA
648 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * *
15765136 GGCATACGGAG-TCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGTAGTAGGATCGGT
713 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATC-G-
* * * * * * * *
15765200 AGCAGGATCGACAGCACGTAGAGGGGAACCTGACCGATTCCCGGCATCCGCATCCTGCTCCTTTG
776 -GCA-G--C-AC-GCA-G-AG-GGGG-ACCCG-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * **
15765265 GCCGACTGAGCACCCGCACGCTCATTTTATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
830 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
15765330 TAA
895 TAA
* **
15765333 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
15765398 CTCGGGCATGTGTTGGAGCCGCATTTTTCTTCGTCGAGGCACCA---T-----CA---CCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * ** *
15765452 TCCTAACCGACGATATTGGGGTTCCGAC-ATCGGCGGGGCTGGGGGGTGTGCTG-ACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGG-GGGGCCGGGGGGTGTGC-GCACATGATGTG
*
15765515 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACGTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
15765580 ACCCCCTTAAAAAGCACTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAGAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
15765645 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTGGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * ***
15765710 TGCATGCCAACAAAAATACAAGGATTATGTCTACCAAGTTTGGGGCCAAAACTCCTTATAAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * ** * * *
15765775 ATTTTAAAAAATCCCAAATCGCAAAACGTTTTGAAAATCATGAAAAATAAAAAATGAGTCATCTT
454 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* *
15765840 GCCATGAAACTTCACGTGAAGGCTTAATGGACCATTGTATGAATTTACAAGCCATAAAAATCGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * *
15765905 TTGGCATGCAGACATATGAGGATGTGCCTAAACCCACCTACCACCCTATCGATCAATGGCTTACG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
15765970 CATCCCGTCTCTCTGGCCGGCATAGTGCCTGCCCGCCCGCTCACCCGCTCGTTTCGTCGGTTGGC
649 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG----CCCGCTCGTTTCGTCGGTTGGC
* * * * *
15766035 TTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCAAGGGTTGCTGCAGCAGGATT
710 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATC
* *
15766100 GGCAGCACGCAGAGGGGGACTCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGA
775 GGCAGCACGCAGAGGGGGACCCG-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * *
15766165 GCACTCGCACGCTCATTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAA
839 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
15766224 GCATAGGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGTGGGTTGCAGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
15766289 CTCGGGCATGTGTTGGTG-CGACATTTTTCTTCATCGAGGCACCATCGTCGGAGCATCGCCGGAG
66 CTCGGGCATGTGCTGGTGCCG-CATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAG
* * * *
15766353 AACCTGACCGGCGGCATTTGGTTTCCGACGATC-GGGGGCCGGGGGGGTGTACGCACATGATGTG
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTG
** * *
15766417 AAATGGGTGCTGGTACTTGGCCCTTGTATTGGCCCCCTATCCCTCAACAAACCTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
15766482 ACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * * *
15766547 GGGGACACTATTTTCAAATGGTCAAAAAATCTTCTACACTTCGAGTTTTGAGCTTAA-TTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
15766611 TGCATGCCAA-AAAAAGTACAAGGATCAAGTCTACCAAGTTTGGGGCCAAAACTCTTTCCGAAAA
389 TGCATGCCAACAAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** * * *
15766675 AATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAATTATGAAAAATAGAAAATGAGTTGTCT
453 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
*
15766740 TGCCATGAAACTTCACGTGAAGGCTTAATGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
15766805 ATTGGCATACAAAAATATGAAGATGTGCCTAAACCCAGCTACCACCCTATCGATCCACGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
15766870 GCATCCCGTCTCTCTGGCCGATGTAGTGTCCGCCCGCCCGCCCGCTCGTTTCGTCGATTGGCTTA
648 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * * *
15766935 AGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCGAGGGTTGCAGCAGCAAGATCGGC
713 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGC
* * * *
15767000 AGCATGTAGAGGGGGACCCAGTAGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCA
778 AGCACGCAGAGGGGGACCC-GTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * *
15767065 CCCGCATGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAT
842 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * ** ** *
15767121 GGATACGAAGTTCATTCCCAGTTTAGGATTAGACCAGATCGAGGGTTGCGTTAGCACACACTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
15767186 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGCCGAAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
15767251 ACCTGACCGATGGCATTGCGGTTCCGATGATCAGGAGGGTCGGGGGGTGTGCGCACATGATGTGC
131 ACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
15767316 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
15767381 ACCCCTT-AAGAGCATTTGGGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
15767445 GGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * * * *
15767510 GCATGCCAACAAATATACAACGATAATGTCTACCAAGTTTGGGGACAAAACTCCTTCCAAAAAAA
390 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * * * *
15767575 TTTAAAAAAATCCCGAACAGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTG
455 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
*
15767640 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCCATAAAAATGGCAT
520 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * *
15767705 TGGCACGCAGAAATATGAAGATATACCTAAACCCACCTACCACACTATCGATCCACGGCTTACGC
585 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * * * *
15767770 ATCCCGTCTCTCTAGCTGGCATAGTGCCAGCCCTCCCACCCGCCCGCTCATTTCGTCGGTTGGCT
650 ATCCCGTCTCTCTGGCCGACGTAGT----GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
** * * * * * * *
15767835 TAAACATATGGAGTTCATTCCCAGCCTAAGGTCAGACCGAATCGAGGGATGCGGCAGTAGGATCG
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCG
* ** * * * * * *
15767900 GTAGCACATAGAAGGGGACCCAGTCGATCCCCGGCTTACGCATCACGCCCCTCTTGCCAGCTGAA
776 GCAGCACGCAGAGGGGGACCC-GTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
*
15767965 CGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * *
15768023 GCATATGGAGCTCATTCCCAGTCTAAGATCGGACTGGATCGAGGGCTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * * **
15768088 CTCAGGCATGTGCTGGTGCCATATTTTTCTTCATCGAGGCACCATTGTCAGAGCATCGCTAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * **
15768153 ACCTGACC-AGCGACGTTGAGGTTCCTG-TGAT-GAGGGGGTTGGGGGGTGTGCGCACATGATGT
131 ACCTGACCGA-CGGCATTGGGGTTCC-GACGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGT
* * *
15768215 TCGATTGCTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
** *
15768280 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGTAATTAAAGTGTTTGAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
15768345 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGCTTTTAGCTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * * * *
15768410 ATGCATACCAAAAAAAATATAAGGATCATGTCTACCAGGTTTGGGGCCAAAACTCCTTCTGAAAA
388 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
15768475 AATTTTAAAAAA-CCTTGAACCATAAAAAGTTTCCAAAATCGTGAAAAATAGAAAACGAGTCGTC
453 AATTTTAAAAAATCC-CGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
15768539 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * * * *
15768604 CATTGGCACGCAAAAATATCAAGATGTGTCTAAACCCACTTACCAACCTATCGATCCACGGCTTG
582 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
15768669 CGCATCCCGTCTCTCTAGTCGGCGTAGTACCTGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTT
647 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * *
15768734 AGGCATACGGAGTTCATTCCCAGTCTCAGATCAGACCAGACCAAGGGTT------GC--GA----
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGG
* * * *
15768787 CAGCATGCAGAGGGGGACCTGGCCGATCCCTGAG-TTGCGCATCCCGCCCCTCTGGCCGGCTGAG
777 CAGCACGCAGAGGGGGACC-CGTCGATCCCCG-GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * *
15768851 CACCCGTACGCCCGTTTCGT-GG--G---T-----TA---A---C-TT---AG-----
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15768883 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *** * *
15768948 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTTGCCGGGGCACCATCGTTGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * ** *
15769013 ACCTGACCGACGGGATTGGGGTTTCGGC-ATTTGGGGGCCGGGGGGGTGTGCACACATGATGTGC
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTGC
** * ** *
15769077 GATGGGTGCTGGTACTTGTTCCATATATTGGCCCCCTATCATTCATCAAACCTTGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
15769142 CCCCCTGAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATA
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
15769207 GGGACA-TTTTTTACAAATGGTCACAAAATCTTGTACAC-TCTGAGTTTTTAGCTGAATGTTTTT
325 GGGACACTTTTTT-CAAATGGTCACAAAATCTTGTACACTTC-GAGTTTTTAGCTGAATTTTTTT
* * * *
15769270 GTACAAGCCAACAAAAATACAGGGATCACGTCCACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
388 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
15769335 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAGTAGAAAACGAGTTGTCT
453 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
*
15769400 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAATCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
15769465 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
15769530 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCTCACGCCCGCCCGCCCGTTCATTTCGTTGGTTGG
648 GCATCCCGTCTCTCTGGCCGACGTAGTG--C-C-CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* *
15769595 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGC-G--GC---A-
709 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGAT
* ** *
15769653 --GCA-CA--CAGAGGGGGACCCAATCGATCCCCAACTTGCGCAACCCGCCCCTCTGGCCGGCTG
774 CGGCAGCACGCAGAGGGGGACCC-GTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * *
15769713 GGTGCCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTATAA
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
15769773 GCATACGAAGTTCATTCCCAATCTAAGATC-GTACCAGACCAATGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCGAGGGTTGCGGCAGCACATGCTGG
* * *
15769837 GCT-GAGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCGTCGTCGGAGCATCGCTGGA
65 GCTCG-GGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGA
* ** *
15769901 GAACCTAACCGGTGGCATTGGGGTTCCGACGATC----GG--AGGGGGTGTGCGCACATGATGTG
129 GAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTG
*
15769960 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
15770025 CCCCCCTTAAAGATCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
15770090 GGGGACACTTTTTTCAAATGGTCACAAAATCTTTTACACTTCTAGTTTTTAGCTGAATTTTTTTA
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * *
15770155 TGCATGCCAAAAAAAATACAAGGATCAGGTCTACCAATTTTGGGGCCAAAACTACTTCCGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* *
15770220 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCACGAAAAATAGAAAACGAGTCGTCTT
454 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
15770285 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
15770350 TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
*
15770415 CATCCCGTCTCTCTGGTCGACGTAGTGCCCGCCCGCCCGCCCGCTCGCCCGCTCATTTCGTCGGT
649 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCT----CG----TTTCGTCGGT
** * * * *
15770480 TGGCTTAGATATACGGAGTTCATTCCCAGT-TGAAGATTAGACCGAACCGAGGGTTGCAGCAACA
706 TGGCTTAGGCATACGGAGTTCATTCCCAGTCT-AAGATCAGACCGGACCGAGGGTTGCGGCAGCA
* * * * *
15770544 AGATCGGCAGCATG-A-AGTGGGGACTCGACTGATCCCCGTCTTGCGCATCCCGCCCCTCTGGCC
770 GGATCGGCAGCACGCAGAG-GGGGACCCGTC-GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * *
15770607 GGCTGAGCGCCCACACGCTCGTTTCGTAGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
833 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
15770672 G-AT-C-G-G---------A--CT--G----GACC--A---AGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * **
15770711 GTCGGGCATGTGCTTGTGCCGTATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCAACGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * * *
15770776 ACCTGAGCGGCGACATTAGGGTTCCGACGGTC-GGGGGCCGGGTGGGGTGTGTGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCC-GG-GGGGTGTGCGCACATGATGTG
* * * * * *
15770840 CGATGGGTGCTGGTAGTTGGCCCTTATATTGGACCCCTATTCCTAACCAAACCTTGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * **
15770905 ACCCCCTTAAAGAGCATATGATATTTTACAGGTTTTTTGCCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
15770970 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
15771035 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAATCCTTCCCAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * *
15771100 ATTTTAAAAAATCCTGAA-CGACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
454 ATTTTAAAAAATCCCGAACCG-TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * *
15771164 TGCCATGAAACTTCTCGTGAAGGCTTAAGAGACCATTGTATGAATTTACAAGCCATAAAAATGGT
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
15771229 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCTACGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
15771294 GCATCCCGTCCCTCTGGCCGACATAGTGCCTGCCCGCCCACCCGCCCGCCCGCCCACTCGTTTCG
648 GCATCCCGTCTCTCTGGCCGACGTA--G--TGCCCG----CCCGCCCGCCCG----CTCGTTTCG
** * * * *
15771359 TCGGTTGGCTTAGGCATATAGAGTTCATTCCCAGTCTAAGTTCAGACCAGACTGAGGGTCGCGGC
701 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGC
** * * * * *
15771424 AGCAGGATCAACAGCATGCAGAGAGGGACCCGATCGACCCCCGGCTTGCGCATCTCGCCCCTTTG
766 AGCAGGATCGGCAGCACGCAGAGGGGGACCCG-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * *
15771489 GCCAGCTAAGCGCCTGCACGCTCGTTTCATGGGTTGACTTAGGCGTACGGAGTTCATTCCCAGTC
830 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
15771554 TAA
895 TAA
* * * * *
15771557 GCATACGGAGTTCATTTCCAGTCTAAGATCAGACCCGACTGACGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
15771622 CTCGGGCATGTGCCGGTGCCACA--TTT-TTC-T----------TCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
15771673 ACCTGACCGACGACATTGGGGTTTCGGCGATCGGGGGTGCCGGGGGGGTGTGTGCACATGATATG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGG-GCC-GGGGGGTGTGCGCACATGATGTG
* *
15771738 CGATGGGTGCTGGTAGTTAGCCCTTATATTGGCCCCCTATCTCC-CATCAAACCTCGAGAACTCA
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC-CCTCATCAAACCTCGAGAACTCA
* * *
15771802 CA-CCCCTTAAAGAGCATTTCAGATTCTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
15771866 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTATACTTCGAGTTTTTAGTTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * ** * *
15771931 GTGCATGCCAACAAAAATACAAGGATGACGTCTACCAAGGTTGGGATCAAAATTCCTTCCAAAAA
388 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * *
15771996 AATTTTAAAAAATCTCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
453 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
15772061 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
15772126 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCTATCCACGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* ** *
15772191 GCATCCCGTCTCTCTGGCCGACGTAGTGCCTGCCCGAGCGCCCGCCCGCTCGTTTAATCGATTGG
648 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCG-CC---CGCCCGCCCGCTCGTTTCGTCGGTTGG
* * * * * * *
15772256 CTTAGGCATATGAAGTTCATTCCTAGTCTAAGATCAGACCGGATCAAGGGTTGTGGCAGTAGGAT
709 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGAT
** * * * * ** * *
15772321 CGATAGCACACAGAGGGGGACCCGATCGATCCTCGACTTACGCATGTCGGCCATCTGGCCGGCTG
774 CGGCAGCACGCAGAGGGGGACCCG-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * *
15772386 AGTGCCCGCACGCTCGTTTCGTGAGTTAACTTAGGCATACAGAGTTCATTCCCAGTCTAA
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15772446 G-AT-C--AG---A----C---C------C-GACC-GA---A-GGCTGCAGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * ***
15772485 CTCAGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCATCGGAGAATCTTTGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
15772550 ACCTGACCGACGGCATTGGGGTTTCGACGATCGGGGGGCCGGGGGGTGTGTGCACATGATGTGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
15772615 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-
196 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * * *
15772679 CCCCTTAAAGAGCATTTAAGATTTTACAGGTTTTCTACCAGTAGCCATTAAAGTGTTTGAAATGG
261 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
15772744 GGACAC-TTTTTCAAATGGTCACAAAATCATGTACACTTCGAGTTTTTATCTGAATTTTTTTGTG
326 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * *
15772808 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTAGGGCCAAAAATCCTTCCAAAAAAAT
391 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * ** * * *
15772873 TTAAAAAAATCCTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTTGTCTTGC
456 TTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
15772938 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
521 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * * * *
15773003 GGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAAACCATGGCTTACGCA
586 GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * * * *
15773068 TCCCGTCTCTCTGGCCGACATAGTGCCCGTCCACCCGCCCGTCTGTTCATTTCATCGGCTGGCTT
651 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCG-C---TCGTTTCGTCGGTTGGCTT
* * * * * * * *
15773133 AGGCATATGGAGTTCATTCCCAATCTAAGATCATATCGGACTGAGGCTTGCAGCAGCAGGATCGA
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGG
* * * ** * * * *
15773198 TAGCATGCAGAGGGGGACCCGACCGATCCTTGACTTGTGCATCCCGCCCCCCTGGCCGGCTGAGT
777 CAGCACGCAGAGGGGGACCCG-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
* *
15773263 GCCCGCACGCTTGTTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
841 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * *
15773320 GCATACGAAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTATGACAGCACAGGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * **
15773385 CTTGGGCATGTGCTGGTACTGCATTTTTCGTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
*** *
15773450 ACCTGACCGACGGCATTGGGGTTTTAACGATCGAGGGGGCCGGGGGGTGTGCGCTCATGATGTGC
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * * *
15773515 GATGTGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCCTCAAACCTTGAGAACTTACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
15773580 CACCCTTAAAAAGCATTTGAGATTTTACAGGTTAGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
15773645 GGGACACTTTTTTCAAATGCTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATGTTTTTTG
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-TTTTTTG
* * *
15773710 TGCAGGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* ** ** * * *
15773775 ATTTTAAAATATCCCGAACCACAAAAAGTTTTGAAAATCATGAAAAATAAAAAACAAGTTGTCTT
454 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* * * * * * * * **
15773840 GCCGTGAAA-ATCA--T--TGGC--ATGCAGA-AATATG-AAG-ATGT----GCC-T--AAA-CC
519 GCCATGAAACTTCACGTGAAGGCTTAAG-GGACCAT-TGTATGAATTTACAAGCCATAAAAATGG
* ** ** *** * * * * * * * * *
15773887 CACCTACCACCCTATCGAT-CGACGACT-TG-C-ACATCC-CGT----CTCTCT-GGT-CAAGG-
582 CA-TTGGCATGC-AGAAATATGAAGA-TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
** * ** * * ** * *** ** * *
15773940 TAGTGCCCGTCCGCCCG-CCCTCTCGTTTCGTCGGTTG-GCTTAG-GCATACG-AAGTTC-ATTC
644 T--TG--CG-CATCCCGTCTCTCT-G-GCCGAC-GTAGTGC-CCGCCCGCCCGCCCGCTCGTTTC
* * * * * * * * * *
15774000 -CCAG-T--CTAAGATCAGACCGGA-TTGAGGGTTACGGCAG-C-AGGATCGGTAGCACGTA--G
700 GTCGGTTGGCTTAG-GCATA-CGGAGTTCA---TT-C-CCAGTCTAAGATCAG-A-C-CGGACCG
*** * * ** * ** * * **** * ** *
15774056 AGGG--GAACCCG-ACCGATCCCCGGCTTGTACATCCCG-CCCCTC--TGGCCGGCTGAGCGC--
755 AGGGTTGCGGCAGCA-GGATCGGCAGCACGCAGAGGGGGACCCGTCGATCCCCGGCT-TGCGCAT
* * * * ** * **** ** * ***** * *
15774113 CCGTACGCTCATTTCGTGGGTTGA-CTTTGGCATACG-GAGTTT-ATTCCCAGTC-TAAGCATAC
818 CC---CGCCCCTCTGGCCGGCTGAGCGCCCGC--ACGCTCGTTTCGTGGGTTGACTTAGGCATAC
*
15774174 GGAGTTCATTCCTAG--T--
878 GGAGTTCATTCCCAGTCTAA
* *
15774190 -C-TA---AG---A-T--C---C---GA-C---CGA-ACCGAGGGTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * *
15774233 CTTGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGTGGCACCATCGCCGGAGCATCGTCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * *
15774298 ACCTGACCGACGGCATTGGGGTTCCGGCGATTGGGTCGACCAGGGGGGTGTGCGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGG-GGGCC-GGGGGGTGTGCGCACATGATGTG
*
15774363 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCACATCAAACCTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
15774428 ACCCCCTTAAAGCA-CATTTGAGATTTTACAGGTTTGCGGCCAGTAGCAATTAAAGTGTCTGAAA
259 ACCCCCTTAAAG-AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
15774492 TGGGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAAG-TGAAATTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT-AGCTGAATTTTTT
* * * * * *
15774556 TGTGCATGACAACAAAAATACAAGGATCACGTGTACCAAGCTTGGGGCCAAAACACCTTTCAAAA
387 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * ** * *
15774621 AAATTCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTC
452 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* *
15774686 TTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATTAAATTTACAAGCCATAAAAATG
517 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA-TGAATTTACAAGCCATAAAAATG
* * *
15774751 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTACCGATCCATGGCTT
581 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * *
15774816 GTGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTCGGTT
646 GCGCATCCCGTCTCTCTGGCCGACGTAGTG-CC-C--GCCCGCCCGCCCGCTCGTTTCGTCGGTT
* * * ** *
15774881 GGCTTAGGCTTACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTAAGGGTTGTGGCAGCAGG
707 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGG
** * * * * *
15774946 ATCGTTAACACGCAGAGGGGGGACCGGTCGATCCCCAGCTTGTGCATCCTGCCCCTCTGGCCGGC
772 ATCGGCAGCACGCAGA-GGGGGACCCGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* *
15775011 TGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15775073 GCATACGGAGTTCATTCCTAATCTAAGATCAGA-CAGGACCGAGGGTTGTGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCA-GACCGAGGGTTGCGGCAGCACATGCTGG
* * ** * ** *
15775137 GCTTGAGCATGTGCTGGTGCTACATTTTTCTTCGTCGGGGCACCATCGTCGGATTATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAG
* * * * * *
15775202 AAGCTGACCGACGGTATTGGGGTTCCGGCAATCGGGGGGGCCGGAGGGCTATGCGCACATGATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCCGG-GGGGTGTGCGCACATGATGT
*
15775267 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
15775332 CACCCCCTTAAAGCA-CATTTGAGATTTTACAGGTTTG-TGGCCAGTAGCCATTAAAGTGTCTGA
258 CACCCCCTTAAAG-AGCATTTGAGATTTTACAGGTTTGCT-GCCAGTAGCCATTAAAGTGTCTGA
* *
15775395 AATGGGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAAG-TGAAATTT
321 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT-AGCTGAATTTT
* * * * * *
15775459 TTTGTGCATGACAACAAAAATACAAGGATCACGTGTACCAAGCTTGGGGCCAAAACACCTTTCAA
385 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * ** * *
15775524 AAAAATTCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCG
450 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* *
15775589 TCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATTAAATTTACAAGCCATAAAAA
515 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA-TGAATTTACAAGCCATAAAAA
* * *
15775654 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTACCGATCCATGGC
579 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
15775719 TTGTGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTTCG
644 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTG-CC-C--GCCCGCCCGCCCGCTCGTTTCG-TCG
* * * ** *
15775784 GTTGGCTTAGGCTTACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTAAGGGTTGTGGCAGC
704 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGC
** * * * * * * *
15775849 AGGATCGTTAACACGTAGAGGGGGGACCGGTCGATCCTCGACTTGTGCATCCTGCCCCTCTGGCC
769 AGGATCGGCAGCACGCAGA-GGGGGACCCGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* *
15775914 GGCTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
833 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15775979 GCATACGGAGTTCATTCCTAATCTAAGATCAGA-CAGGACCGAGGGTTGTGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCA-GACCGAGGGTTGCGGCAGCACATGCTGG
* * ** * ** *
15776043 GCTTGAGCATGTGCTGGTGCTACATTTTTCTTCGTCGGGGCACCATCGTCGGATTATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAG
* * * * * *
15776108 AAGCTGACCGACGGTATTGGGGTTCCGGCAATCGGGGGGGCCGGAGGGCTATGCGCACATGATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCCGG-GGGGTGTGCGCACATGATGT
* *
15776173 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
15776238 CACCCCCTTAAAGAGCTTTTGCGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
15776303 TGGGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * * *
15776368 GTGCATGCCAACAAAAATACAAGGAT-ATGGTCTACCTAGTTTGGGACCAAAAATACTTTCGAAA
388 GTGCATGCCAACAAAAATACAAGGATCA-CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * * * *
15776432 AAATTTTAAAACATCCCGAACCGAAAAAAGTTTCAAAAATAATGAAAAAGAGAAAATGAGTCATC
452 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
*
15776497 TTGCCATGGAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * *
15776562 CATTGGCATCCAAAAATATGGAGATGTGCCTAAACCCACCGACCACCCTATCGATCCACGGCTTG
582 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
15776627 CGCATCCCGTCCCTCTGGCCGGCGTAGTGCCAGCCCGCCCGCCCTCCCACCCTCTCGTTTCATCA
647 CGCATCCCGTCTCTCTGGCCGACGTAGT----GCCCGCCCG----CCCGCCCGCTCGTTTCGTCG
* * ** *
15776692 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCAACAAC
704 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGC
** * * * *
15776757 AGGATCGGCAGCACGCAGAGGGGGACCCAACCGATTCTCGGCCTGTGCATCCCGCCCCTCTGGCC
769 AGGATCGGCAGCACGCAGAGGGGGACCC-GTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * * * *
15776822 GGCTGAGCGCCCACACGCTCATTTCGTGGGATGACTTAGGCATATGGAGTTCATTCCAAGTCTAA
833 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * ** * *
15776887 GCATATTGAGTTCATTACTAGTCTAAGATCAAACTGGACCGAGGGTTGTGGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
15776952 CTCAGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
15777017 ACCTAACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCAAAAGA-GTTGC
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATG-TGC
* *
15777081 GATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
15777146 -CCCGTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
15777210 GGGACACCTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCAGAATTTTTTTGT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * ** * *
15777275 GCATGCCGACAAAAATACAAGGATCACATCTACCAAGTTTGGTACCAAAACGCCTTCCCAAAAAA
390 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* *
15777340 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTG
455 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* *
15777405 CCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGATTTTACAAGCCATAAAAATGGCAT
520 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
15777470 TGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACGACCTTATCGATCAACGGCTTGCGC
585 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
** * * * * ** * * *
15777535 ATCTTGCCCCTCT---AG-C-T-G-G-CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGG
650 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* *
15777592 CATACGGTGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCGGCAGCA
715 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCA
15777647 CATGCTGGGC
Statistics
Matches: 14556, Mismatches: 1772, Indels: 951
0.84 0.10 0.06
Matches are distributed among these distances:
847 2 0.00
848 239 0.02
849 195 0.01
850 3 0.00
851 1 0.00
852 1 0.00
853 5 0.00
854 4 0.00
855 5 0.00
856 1 0.00
857 3 0.00
859 16 0.00
860 577 0.04
861 7 0.00
862 3 0.00
863 44 0.00
864 151 0.01
865 12 0.00
866 10 0.00
867 12 0.00
868 11 0.00
869 10 0.00
870 16 0.00
871 7 0.00
872 12 0.00
873 121 0.01
874 540 0.04
875 181 0.01
876 39 0.00
877 86 0.01
878 38 0.00
879 43 0.00
880 493 0.03
881 75 0.01
882 129 0.01
883 321 0.02
884 941 0.06
885 336 0.02
886 331 0.02
887 13 0.00
888 85 0.01
889 266 0.02
890 147 0.01
891 195 0.01
892 13 0.00
893 531 0.04
894 11 0.00
895 51 0.00
896 94 0.01
897 1093 0.08
898 597 0.04
899 160 0.01
900 169 0.01
901 605 0.04
902 1904 0.13
903 268 0.02
904 207 0.01
905 1172 0.08
906 937 0.06
907 112 0.01
908 593 0.04
909 251 0.02
910 21 0.00
911 40 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (897 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGA
ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
TTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGC
ACGCAGAGGGGGACCCGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:15768027 original size:26 final size:26
Alignment explanation
Indices: 15767997--15768049 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15767987 GTTGACTTAG
*
15767997 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
*
15768023 GCATATGGAGCTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
15768049 G
1 G
15768050 ATCGGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAGTCTAA
Found at i:15769799 original size:26 final size:26
Alignment explanation
Indices: 15769747--15769799 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15769737 GTTGACTTAG
* *
15769747 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGAAGTTCATTCCCAATATAA
*
15769773 GCATACGAAGTTCATTCCCAATCTAA
1 GCATACGAAGTTCATTCCCAATATAA
15769799 G
1 G
15769800 ATCGTACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.25, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAATATAA
Found at i:15771564 original size:26 final size:26
Alignment explanation
Indices: 15771534--15771583 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15771524 GACTTAGGCG
15771534 TACGGAGTTCATTCCCAGTCTAAGCA
1 TACGGAGTTCATTCCCAGTCTAAGCA
*
15771560 TACGGAGTTCATTTCCAGTCTAAG
1 TACGGAGTTCATTCCCAGTCTAAG
15771584 ATCAGACCCG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.24, G:0.20, T:0.30
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCTAAGCA
Found at i:15773331 original size:26 final size:26
Alignment explanation
Indices: 15773294--15773346 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15773284 GTTGACTTAG
*
15773294 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
15773320 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
15773346 G
1 G
15773347 ATCGGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:15774171 original size:26 final size:26
Alignment explanation
Indices: 15774142--15774194 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15774132 GTTGACTTTG
*
15774142 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
15774168 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15774194 G
1 G
15774195 ATCCGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15775077 original size:26 final size:26
Alignment explanation
Indices: 15775047--15775099 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15775037 GTTGACTTAG
*
15775047 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
15775073 GCATACGGAGTTCATTCCTAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15775099 G
1 G
15775100 ATCAGACAGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:15775700 original size:905 final size:903
Alignment explanation
Indices: 15773851--15777646 Score: 5339
Period size: 905 Copynumber: 4.2 Consensus size: 903
15773841 CCGTGAAAAT
* * *
15773851 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCGACGACTTG
1 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTTG
* * * * *
15773916 CACATCCCGTCTCTCTGGTCAAGGTAGTGCCCG--T--CCGCCCGCCCTCTCGTTTCGTCGGTTG
66 CGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTCGGTTG
* * * * *
15773977 GCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCGGATTGAGGGTTACGGCAGCAGGA
131 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTAAGGGTTGCGGCAGCAGGA
* * * *
15774042 TCGGTAGCACGTAGAGGGGAACCCGACCGATCCCCGGCTTGTACATCCCGCCCCTCTGGCCGGCT
196 TCGGTAACACGCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCT
* * * * *
15774107 GAGCGCCCGTACGCTCATTTCGTGGGTTGACTTTGGCATACGGAGTTTATTCCCAGTCTAAGCAT
261 GAGCACCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
* * * * * *
15774172 ACGGAGTTCATTCCTAGTCTAAGATCCGACCGAACCGAGGGTTGCGGTAGCACATGCTGGGCTTG
326 ACGGAGTTCATTCCTAATCTAAGATCAGACAGGACCGAGGGTTGTGGCAGCACATGCTGGGCTTG
* * * * * *
15774237 GGCATGTGTTGGTGCCGCATTTTTCTTCGTCGTGGCACCATCGCCGGAGCATCGTCAGAGAACCT
391 AGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCT
* * ** * * *
15774302 GACCGACGGCATTGGGGTTCCGGCGATTGGGTCGACCAGGGGGGTGTGCGCACATGATGTGCGAT
456 GACCGACGGCATTGGGGTTCCGGCAATCGGGGGGGCC-GGGGGCTATGCGCACATGATGTGCGAT
*
15774367 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCACATCAAACCTCGAGAACTCACACCC
520 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
** *
15774432 CCTTAAAGCA-CATTTGAGATTTTACAGGTTTGCGGCCAGTAGCAATTAAAGTGTCTGAAATGGG
585 CCTTAAAG-AGCATTTGAGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGAAATGGG
15774496 GACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAAG-TGAAATTTTTTGTG
649 GACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTT-AGCTGAAATTTTTTGTG
* *
15774560 CATGACAACAAAAATACAAGGATCACGTGTACCAAGCTTGGGGCCAAAACACCTTTCAAAAAAAT
713 CATGACAACAAAAATACAAGGATCACGTCTACCAAGCTTGGGACCAAAACACCTTTCAAAAAAAT
*
15774625 TCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTCTTGC
778 TCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACAAGTCGTCTTGC
*
15774690 CATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATTAAATTTACAAGCCATAAAAATGG
843 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA-TAAATTTACAAGCCATAAAAATGG
* *
15774752 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTACCGATCCATGGCTTG
1 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTTG
*
15774817 TGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTCGGTTG
66 CGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTCGGTTG
* * *
15774882 GCTTAGGCTTACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTAAGGGTTGTGGCAGCAGGA
131 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTAAGGGTTGCGGCAGCAGGA
* ** * *
15774947 TCGTTAACACGCAGAGGGGGGA-CCGGTCGATCCCCAGCTTGTGCATCCTGCCCCTCTGGCCGGC
196 TCGGTAACACGCAGA-GGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGC
*
15775011 TGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
260 TGAGCACCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
15775076 TACGGAGTTCATTCCTAATCTAAGATCAGACAGGACCGAGGGTTGTGGCAGCACATGCTGGGCTT
325 TACGGAGTTCATTCCTAATCTAAGATCAGACAGGACCGAGGGTTGTGGCAGCACATGCTGGGCTT
* ** *
15775141 GAGCATGTGCTGGTGCTACATTTTTCTTCGTCGGGGCACCATCGTCGGATTATCGTCGGAGAAGC
390 GAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACC
* *
15775206 TGACCGACGGTATTGGGGTTCCGGCAATCGGGGGGGCCGGAGGGCTATGCGCACATGATGTGTGA
455 TGACCGACGGCATTGGGGTTCCGGCAATCGGGGGGGCCGG-GGGCTATGCGCACATGATGTGCGA
15775271 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
519 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
15775336 CCCTTAAAGCA-CATTTGAGATTTTACAGGTTTG-TGGCCAGTAGCCATTAAAGTGTCTGAAATG
584 CCCTTAAAG-AGCATTTGAGATTTTACAGGTTTGAT-GCCAGTAGCCATTAAAGTGTCTGAAATG
15775399 GGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAAG-TGAAATTTTTTG
647 GGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTT-AGCTGAAATTTTTTG
* *
15775463 TGCATGACAACAAAAATACAAGGATCACGTGTACCAAGCTTGGGGCCAAAACACCTTTCAAAAAA
711 TGCATGACAACAAAAATACAAGGATCACGTCTACCAAGCTTGGGACCAAAACACCTTTCAAAAAA
*
15775528 ATTCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTCTT
776 ATTCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACAAGTCGTCTT
*
15775593 GCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATTAAATTTACAAGCCATAAAAATGG
841 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA-TAAATTTACAAGCCATAAAAATGG
* *
15775657 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTACCGATCCATGGCTTG
1 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTTG
*
15775722 TGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTTCGGTT
66 CGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCG-TCGGTT
* * *
15775787 GGCTTAGGCTTACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACTAAGGGTTGTGGCAGCAGG
130 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTAAGGGTTGCGGCAGCAGG
* * ** * * *
15775852 ATCGTTAACACGTAGAGGGGGGA-CCGGTCGATCCTCGACTTGTGCATCCTGCCCCTCTGGCCGG
195 ATCGGTAACACGCAGA-GGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGG
*
15775916 CTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
259 CTGAGCACCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
15775981 ATACGGAGTTCATTCCTAATCTAAGATCAGACAGGACCGAGGGTTGTGGCAGCACATGCTGGGCT
324 ATACGGAGTTCATTCCTAATCTAAGATCAGACAGGACCGAGGGTTGTGGCAGCACATGCTGGGCT
* ** *
15776046 TGAGCATGTGCTGGTGCTACATTTTTCTTCGTCGGGGCACCATCGTCGGATTATCGTCGGAGAAG
389 TGAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAAC
* *
15776111 CTGACCGACGGTATTGGGGTTCCGGCAATCGGGGGGGCCGGAGGGCTATGCGCACATGATGTGTG
454 CTGACCGACGGCATTGGGGTTCCGGCAATCGGGGGGGCCGG-GGGCTATGCGCACATGATGTGCG
*
15776176 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCACAC
518 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
15776241 CCCCTTAAAGAGCTTTTGCGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGAAATGG
583 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
15776306 GGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
648 GGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTGTG
* * * * * *
15776371 CATGCCAACAAAAATACAAGGAT-ATGGTCTACCTAGTTTGGGACCAAAA-ATACTTTCGAAAAA
713 CATGACAACAAAAATACAAGGATCA-CGTCTACCAAGCTTGGGACCAAAACA-CCTTTCAAAAAA
* * * ** * ** *
15776434 ATTTTAAAACATCCCGAACCGAAAAAAGTTTCAAAAATAATGAAAAAGAGAAAATGAGTCATCTT
776 ATTCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACAAGTCGTCTT
* *
15776499 GCCATGGAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
841 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATAAATTTACAAGCCATAAAAATGG
* * * * *
15776562 CATTGGCATCCAAAAATATGGAGATGTGCCTAAACCCACCGACCACCCTATCGATCCACGGCTTG
1 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTTG
* ** * * ** * * *
15776627 CGCATCCCGTCCCTCTGGCCGGCGTAGTGCCAGCCCGCCCGCCCTCCCACCCTCTCGTTTCATCA
66 CGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCA----CTCGTTTCGTCG
* ** *
15776692 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCAACAAC
127 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTAAGGGTTGCGGCAGC
* * * * * *
15776757 AGGATCGGCAGCACGCAGAGGGGGACCCAACCGATTCTCGGCCTGTGCATCCCGCCCCTCTGGCC
192 AGGATCGGTAACACGCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCC
* * * * * *
15776822 GGCTGAGCGCCCACACGCTCATTTCGTGGGATGACTTAGGCATATGGAGTTCATTCCAAGTCTAA
257 GGCTGAGCACCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * * *
15776887 GCATATTGAGTTCATTACTAGTCTAAGATCAAACTGGACCGAGGGTTGTGGCAGCACATGTTGGG
322 GCATACGGAGTTCATTCCTAATCTAAGATCAGACAGGACCGAGGGTTGTGGCAGCACATGCTGGG
* * *
15776952 C-TCAGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAG
387 CTTGA-GCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAG
* * * * * * *
15777016 AACCTAACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCAAAAGA-GTT
451 AACCTGACCGACGGCATTGGGGTTCCGGCAATCGGGGGGGCCGGGGGCTATGCGCACATGATG-T
* *
15777079 GCGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCA
515 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * *
15777144 CA-CCCGTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
580 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGAAA
* * * * *
15777208 TGGGGACACCTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCAGAATTTTTTT
645 TGGGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTT
* * * * * * * *
15777273 GTGCATGCCGACAAAAATACAAGGATCACATCTACCAAGTTTGGTACCAAAACGCCTTCCCAAAA
710 GTGCATGACAACAAAAATACAAGGATCACGTCTACCAAGCTTGGGACCAAAACACCTTTCAAAAA
* * * **
15777338 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCT
775 AATTCTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACAAGTCGTCT
* * *
15777403 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGATTTTACAAGCCATAAAAATGG
840 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATAAATTTACAAGCCATAAAAATGG
* * * *
15777467 CATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACGACCTTATCGATCAACGGCTTG
1 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTTG
* ** ** * * *
15777532 CGCAT--C-T-TGC-C---CC-TC-T-A-GCTGGC-TGAGCGCCCGCACGCTCGTTTCGTGGGTT
66 CGCATCCCGTCT-CTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTCGGTT
* * * *
15777584 GACTTAGGCATACGGTGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTGCGGCAGCA
130 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTAAGGGTTGCGGCAGCA
15777647 CATGCTGGGC
Statistics
Matches: 2656, Mismatches: 216, Indels: 58
0.91 0.07 0.02
Matches are distributed among these distances:
889 69 0.03
893 8 0.00
894 4 0.00
896 1 0.00
897 1 0.00
898 2 0.00
901 89 0.03
902 2 0.00
903 2 0.00
904 2 0.00
905 1344 0.51
906 799 0.30
907 19 0.01
908 306 0.12
909 8 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (903 bp):
CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTTG
CGCATCCCGTCTCTCTGGCCAACGTAATGCCCGCTTGCCCGCCCGCCCACTCGTTTCGTCGGTTG
GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTAAGGGTTGCGGCAGCAGGA
TCGGTAACACGCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCT
GAGCACCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
ACGGAGTTCATTCCTAATCTAAGATCAGACAGGACCGAGGGTTGTGGCAGCACATGCTGGGCTTG
AGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCT
GACCGACGGCATTGGGGTTCCGGCAATCGGGGGGGCCGGGGGCTATGCGCACATGATGTGCGATG
GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
CTTAAAGAGCATTTGAGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
CACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTGTGCAT
GACAACAAAAATACAAGGATCACGTCTACCAAGCTTGGGACCAAAACACCTTTCAAAAAAATTCT
AAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACAAGTCGTCTTGCCAT
GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATAAATTTACAAGCCATAAAAATGG
Found at i:15775983 original size:26 final size:26
Alignment explanation
Indices: 15775953--15776005 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15775943 GTTGACTTAG
*
15775953 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
15775979 GCATACGGAGTTCATTCCTAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15776005 G
1 G
15776006 ATCAGACAGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:15776897 original size:26 final size:26
Alignment explanation
Indices: 15776861--15776913 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15776851 GATGACTTAG
*
15776861 GCATATGGAGTTCATTCCAAGTCTAA
1 GCATATGGAGTTCATTACAAGTCTAA
* *
15776887 GCATATTGAGTTCATTACTAGTCTAA
1 GCATATGGAGTTCATTACAAGTCTAA
15776913 G
1 G
15776914 ATCAAACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.19, T:0.34
Consensus pattern (26 bp):
GCATATGGAGTTCATTACAAGTCTAA
Found at i:15781141 original size:26 final size:26
Alignment explanation
Indices: 15781105--15781157 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15781095 GTTGACTTAG
*
15781105 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
15781131 GCATACGGAGTTCATTCCCAGCCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
15781157 G
1 G
15781158 ATCGGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.28, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGCCTAA
Found at i:15783160 original size:26 final size:26
Alignment explanation
Indices: 15783131--15783183 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15783121 GTTGACTTAG
*
15783131 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
15783157 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
15783183 G
1 G
15783184 ATTAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:15784056 original size:26 final size:26
Alignment explanation
Indices: 15784020--15784072 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15784010 GTTCACTTAG
*
15784020 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTGCATTCCCAGTCTAA
15784046 GCATACGGAGTGCATTCCCAGTCTAA
1 GCATACGGAGTGCATTCCCAGTCTAA
15784072 G
1 G
15784073 ATCAAACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.26, G:0.23, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTGCATTCCCAGTCTAA
Found at i:15785821 original size:26 final size:26
Alignment explanation
Indices: 15785792--15785844 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15785782 TTTGACTTAG
* *
15785792 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCACAGTCTAA
15785818 GCATACAGAGTTCATTCACAGTCTAA
1 GCATACAGAGTTCATTCACAGTCTAA
15785844 G
1 G
15785845 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCACAGTCTAA
Found at i:15786729 original size:26 final size:26
Alignment explanation
Indices: 15786699--15786751 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15786689 GTTGACTTAG
*
15786699 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15786725 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15786751 G
1 G
15786752 ATGGGAACAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:15788523 original size:26 final size:26
Alignment explanation
Indices: 15788485--15788534 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15788475 GTTGACTTAG
15788485 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
15788511 GCATACGGTGTTCATTCCCAGTCT
1 GCATACGGAGTTCATTCCCAGTCT
15788535 GAGATCAGAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.22, C:0.28, G:0.20, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15789462 original size:14 final size:14
Alignment explanation
Indices: 15789451--15789481 Score: 53
Period size: 14 Copynumber: 2.2 Consensus size: 14
15789441 CTTCGTCGTG
15789451 GCACCATCGTCGGA
1 GCACCATCGTCGGA
*
15789465 GCATCATCGTCGGA
1 GCACCATCGTCGGA
15789479 GCA
1 GCA
15789482 TCGCCAGAGA
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
14 16 1.00
ACGTcount: A:0.23, C:0.32, G:0.29, T:0.16
Consensus pattern (14 bp):
GCACCATCGTCGGA
Found at i:15789482 original size:14 final size:14
Alignment explanation
Indices: 15789455--15789483 Score: 58
Period size: 14 Copynumber: 2.1 Consensus size: 14
15789445 GTCGTGGCAC
15789455 CATCGTCGGAGCAT
1 CATCGTCGGAGCAT
15789469 CATCGTCGGAGCAT
1 CATCGTCGGAGCAT
15789483 C
1 C
15789484 GCCAGAGAAC
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 15 1.00
ACGTcount: A:0.21, C:0.31, G:0.28, T:0.21
Consensus pattern (14 bp):
CATCGTCGGAGCAT
Found at i:15790499 original size:292 final size:288
Alignment explanation
Indices: 15789940--15790524 Score: 787
Period size: 292 Copynumber: 2.0 Consensus size: 288
15789930 CCATAAAAAT
* * *
15789940 GGCATTGGCATGCAGAAATAAGAAGATGTGCCTAAACCCACTTGCCACCCTATCGATCCACGGCT
1 GGCATTGGCACGCAGAAATAAGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
**
15790005 TGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCCCGCCAGCCCGCTAGTTTCATCGGTTGGCTTAG
66 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCAGCCCGCTAGTTTCATCGGTTGGCTTAG
* * ** * * * *
15790070 GCATATGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGTGGTAGGATCGGCA
131 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAAACCAAGGGTTACGGTAGCAGGATCGGCA
*
15790135 GCACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCAC
196 GCACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCAC
**
15790200 CCGTACGCT-AGTTTTGTGGGTTGACTTA
261 CCGTACGCTCA-TTTAATGGGTTGACTTA
* *
15790228 GGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
1 GGCATTGGCACGCAGAAATAAGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
15790293 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCTCA-TTTCGTCGGTTGT
66 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCAG--C--CCGCT-AGTTTCATCGGTTGG
* * * *
15790357 CTTAGGCATACGAAGTTCATTCCCAGTCTACGATTAGACCAAACTAAGGGTTATGGTAGCAGGAT
126 CTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAAACCAAGGGTTACGGTAGCAGGAT
* ** * * ** * *
15790422 CGGTAGCACGTAGAGGGGGACCTGGTCGATCGTCGGCTTGTGCATCCCGCCCCTCTGGCCGGTTG
191 CGGCAGCACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
*
15790487 AGCGCCCGTACGCTCATTTAATGGGTTGACTTA
256 AGCACCCGTACGCTCATTTAATGGGTTGACTTA
15790520 GGCAT
1 GGCAT
15790525 ACAGAGTTCA
Statistics
Matches: 256, Mismatches: 35, Indels: 8
0.86 0.12 0.03
Matches are distributed among these distances:
288 96 0.38
290 1 0.00
292 157 0.61
293 2 0.01
ACGTcount: A:0.19, C:0.30, G:0.28, T:0.23
Consensus pattern (288 bp):
GGCATTGGCACGCAGAAATAAGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCAGCCCGCTAGTTTCATCGGTTGGCTTAG
GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAAACCAAGGGTTACGGTAGCAGGATCGGCA
GCACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCAC
CCGTACGCTCATTTAATGGGTTGACTTA
Found at i:15790558 original size:26 final size:26
Alignment explanation
Indices: 15790521--15790572 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15790511 GTTGACTTAG
15790521 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
15790547 GCATAC-GAAGTTCATTCCCAGTCTAA
1 GCATACAG-AGTTCATTCCCAGTCTAA
15790573 TATCGGACCG
Statistics
Matches: 25, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.31, C:0.27, G:0.15, T:0.27
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:15791457 original size:26 final size:26
Alignment explanation
Indices: 15791421--15791473 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15791411 GTTGACTTAG
*
15791421 GCATACGGAGTTCTTTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15791447 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15791473 G
1 G
15791474 ATCGAATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.26, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15793241 original size:26 final size:26
Alignment explanation
Indices: 15793193--15793245 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15793183 GATGACTTAG
* *
15793193 GCATACGGAGTTCATCCCCAGTCTAA
1 GCATACGGAGGTCATCCACAGTCTAA
* *
15793219 GCATACGGAGGTCATTCATAGTCTAA
1 GCATACGGAGGTCATCCACAGTCTAA
15793245 G
1 G
15793246 ATAGGATCGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.25, G:0.23, T:0.25
Consensus pattern (26 bp):
GCATACGGAGGTCATCCACAGTCTAA
Found at i:15794121 original size:26 final size:26
Alignment explanation
Indices: 15794084--15794136 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
15794074 GTTGACTTAG
15794084 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
15794110 GCATAC-GAAGTTCATTCCCAGTCTAA
1 GCATACAG-AGTTCATTCCCAGTCTAA
15794136 G
1 G
15794137 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 1 0.04
26 25 0.96
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:15794574 original size:900 final size:901
Alignment explanation
Indices: 15792318--15796981 Score: 6287
Period size: 898 Copynumber: 5.2 Consensus size: 901
15792308 GTTGACTTAG
* * *
15792318 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGGCAGCATATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
15792383 C-CTGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGAGGCACCATCGCCAGAGCATCGCCGGAG
66 CTC-GGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAG
* * * * *
15792447 AACTTGACCGACGGCATTGGGGTTTCGACGATC-GGGGGGCCGGGGGGTGTACGCATATGATGTG
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTG
* * *
15792511 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAACAAATCTTGAGAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
15792576 TCCCCCTTAATGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * * *
15792641 GGGGACATTTTTTTCAAATGGTCAAAAAATCTTATATACTTCGAGTTTTTAGCTGAATTTTTTTA
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
15792706 TGCATGCCAACAAAAATACAAGGATCACG--TACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* ** *
15792769 ATTTTACAAAATCTCGAACCGTAAAAAGTTTTAAAAAATCGTGAAAAATAGAAAACGAGTCATCT
455 ATTTTAAAAAATCTCGAACCGTAAAAAG-TTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
15792834 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGCATGAATTTACAGGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
15792899 ATTGGCACACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGC
584 ATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
15792964 GCATCCCATTTCTATGGCCGGA-GTAGTGCCCGCCCGCCCGCCTGCCCGCTTGTTTCGTCGGTTT
649 GCATCCCGTCTCTCT-GCCCGACGTAGTGCCCGCCCGCCC-CCT-CCCGCTTGTTTCGTCGGTTG
* * * *** * *
15793028 GCTTAGGAATACGGAGTTCATTCCCAGTCTAAGATTGGACTGGACCGAGGGTTATGGTAGTAGGA
711 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCAGGA
* * ** * * * *
15793093 TTGGCAGCACGTACAGGGGGACCCGACCGATCCCC-AGCTTGCGTATCCCGCCCCTCTGGTCGGT
776 TTGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGA-CTTGTGCATCCCGCCCCTCTGGCCGGC
* * *
15793157 TGAGCGCCCGCACGCTCGTTTCATGGGATGACTTAGGCATACGGAGTTCATCCCCAGTCTAA
840 TGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* ** * * * *
15793219 GCATACGGAGGTCATTCATAGTCTAAGAT-AGGATCGGACTGAGGGTTGCGACAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCA-GACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* *
15793283 GCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCAT---C---G--T---CGGAG
65 GCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAG
* * *
15793337 AACCTGATCGACAGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-CGGGGGGGTGTGCGCACATGATGT
* * ** *
15793402 GCGATGGGTGCTGGTGCTTGGCCCTTATGTTGGCCATCTATCCCTCATCAAGCCTCGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
15793467 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTACCCATTAAAGTGTCTAAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
15793532 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATT-GAGTTTTTAGTTGAAGTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAATTTTTT
* * **
15793596 TGTGCATGCCAACAAAAATACAAGGATCACATCCACCAAGTTTGGGGCCAAAACTCCTTAGAAAA
388 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* ** * *
15793661 AAATTTAAAAAAATCTCGAACCACAAAAAGTCTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
453 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTC
15793726 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
518 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
15793791 CATTGGCACATAGAAATATGAAGATGTACCAAAACCCACCTACCACCCTATCGATTCACGGCTTG
583 CATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
15793856 CGCATCCCGTCTCTCTACCCGACGTAGTGCCCGCCCGCTCACCCTCCCGCTTGTTTCATCGGTTG
648 CGCATCCCGTCTCTCTGCCCGACGTAGTGCCCGCCCGC-C-CCCTCCCGCTTGTTTCGTCGGTTG
* * * *
15793921 GGTTAGGCATACGGAGTTCATTCCCAGTGTAAGATCAGACTGGACCGAGGGTTGCAGCAGCAGGA
711 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCAGGA
* * *
15793986 TTGACAGCACGCAGAGGAGGACCCGGTCGATCCCCGGCTTGTGCATCCCG-CCC-CTGGCCGGCT
776 TTGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGCT
* * * *
15794049 GAACACCCACACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
841 GAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
15794110 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
15794175 CCCGGGCATGTATTGGTGCCGCATTTTTCTTCGTCGGGGCATCATCACCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGA
* * * * * *
15794240 ACCTGACCGGCGGCATTAGGGTTCTGATGAT-TGGGGGGCGGGGGGGTGTGCACACATGATGTGC
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGC
*
15794304 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTGGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
15794369 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * *
15794434 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAATTTTTTAGCAGAAGTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
15794499 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTCGGTGCCAAAACTCCTTTCAAAAAAA
391 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAA
* ** *
15794564 TTTTAAAAAATC-CTGAACCGTAAAAAGTTTCGACAATAATGAAAAATAGAAAACGAGTCATCTT
456 TTTTAAAAAATCTC-GAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
15794628 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCA
520 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
15794693 TTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCG
585 TTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * *
15794758 CATCCCGTCTCTCTGACCGACGTAGTGCACGGCCGCTCGCCTGCCCGCTCGTTTCGTCGGTTGGC
650 CATCCCGTCTCTCTGCCCGACGTAGTGCCCGCCCGC-CCCCT-CCCGCTTGTTTCGTCGGTTGGC
* * * * * * *
15794823 TTAGGCATACGGAGTTCATTCCCAGCCTAAGATCGGACCAGACCAAGGGTTGCAACAGTAAGATC
713 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCAGGATT
* * * * *
15794888 GGTAGCAGGCAGAGGGGGACCCAGCCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGACTGA
778 GGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGCTGA
* * * *
15794953 GCACCCGTACACTCGTTTCATGGGTTGACTTAGTCATACAGAGTTCATTCCCAGTCTAA
843 GCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
15795012 GCATATGGAGTTCATTTCCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGAACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
15795077 CTCGGGCATGTGTTAGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGCAGCATCACCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGA
*
15795142 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGC
* * *
15795207 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTTACCCCTCATCAAACCTTGAGACCTCAC
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC-TATCCCTCATCAAACCTCGAGAACTCAC
*
15795272 ACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC-GAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
15795336 GGGGACACTTTTTGCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * *
15795401 TGCATGCCAAAAAAAATACAAGGATCATGTCTACCAACTTTGGGGCCAAAAATCCTTCCGAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* **
15795466 ATTTTAAAAAATCTTGAACCGTAAAAAGTTT-GAAAATCGTGAAAAATAGAAAACGAGTCGTCAC
455 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
15795530 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTCATAAAAATGGCA
520 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * *
15795595 TT-G-ACATGCAGAAATAAGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCCTG
585 TTGGCACAT--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* ** * * * **
15795658 CGCATCCCGTCTCTCTGGCCGGTGTAGCGCCCGCCCGCCCGCT--CGCTCGTTTCGTCATTTGGC
648 CGCATCCCGTCTCTCTGCCCGACGTAGTGCCCGCCCGCCCCCTCCCGCTTGTTTCGTCGGTTGGC
* *
15795721 TTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCGAACCGAGGGTTGCAGCAGCAGGATT
713 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCAGGATT
* * * * *
15795786 GGTAGCACGCTGAGAGGGACCCGGTCGATCCTCGACTTGTGCATCCCGCCCCTCTGGCTGGCTGA
778 GGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGCTGA
* *
15795851 GCACCCGCACGTTTGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 GCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15795910 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGTACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * ** * *
15795975 CTCGGGCAGGTGTTGGTGCTGTATATTTCTTC-ACTGGGGCACCATCGTCGGAGCATCGTCAGAG
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCACCGGAGCATCGCCGGAG
* * * * *
15796039 AACCTGACCGATGGCATTGGGGTTCAGGCGATCGGGGGGGCCGGGGGGGTGTACGTACATGATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-CGGGGGGGTGTGCGCACATGATGT
** *
15796104 GCGATGGGTGCTTATAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
15796169 CACCCCCTTAAAAAGCAATTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
15796234 TGGGGACAGTTTTTTCAAATTGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* **
15796299 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CTGAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
* * * * *
15796363 AATTTTAAAAAATCTCAAACCGTAAAAAGTTTTGAAAATCATG-AAAATAAAAAACGGGTCGTCT
454 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* * **
15796427 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACATGCCATGAAAATTTC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * *
15796492 ATTGGCACATAGAAATATGAAGATGTGCTTAAACCTACCGACCACCCTATCGATCCACGGCTTCC
584 ATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *** * * *
15796557 GCATCCCGTCTCTTTGGATGGCGTAGTGCCCGCCCACCCACCCACCCGCTTGTTTCGTCGGTTGG
649 GCATCCCGTCTCTCTGCCCGACGTAGTGCCCGCCC-GCC-CCCTCCCGCTTGTTTCGTCGGTTGG
* * * * ** * *
15796622 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCAAGGGTTGTGGTAGCTGGAT
712 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCAGGAT
* * * * *
15796687 CGGCAGCACGTAGAGGGGGACTCGGTCGATCCCCGACTTGTGCATCCCGTCCCTCTGGTCGGCTG
777 TGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGCTG
** * * *
15796752 AGCACCTACACGCTCATTTCGTGGGTTAACTTAGGCATACGGAGTTCATTCCCAG--T--
842 AGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15796808 -C-TA---AG---A-T--C-G-----GAT-----CGGACCGAGGGTTACGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
15796851 CTCGGGCATGTGTTGGTGCCACATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGA
* * *
15796916 ACCTGATCGACGGCATTGGAGTTCCGAC-ATCGGGGGGGCCACGGGGGGTGTGCGCACATGATGT
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-C-GGGGGGGTGTGCGCACATGATGT
15796980 GC
194 GC
15796982 CTAAACCAAC
Statistics
Matches: 3330, Mismatches: 388, Indels: 115
0.87 0.10 0.03
Matches are distributed among these distances:
875 12 0.00
876 126 0.04
877 1 0.00
881 3 0.00
886 1 0.00
887 1 0.00
889 1 0.00
890 34 0.01
891 164 0.05
892 230 0.07
893 300 0.09
894 60 0.02
895 2 0.00
896 2 0.00
897 3 0.00
898 602 0.18
899 194 0.06
900 602 0.18
901 107 0.03
902 586 0.18
903 216 0.06
904 83 0.02
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (901 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGA
ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGGTGTGCGCACATGATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAA
TTTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
TGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGTCTCTCTGCCCGACGTAGTGCCCGCCCGCCCCCTCCCGCTTGTTTCGTCGGTTGGCTTA
GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCAGGATTGGC
AGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCA
CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:15795914 original size:26 final size:26
Alignment explanation
Indices: 15795884--15795936 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15795874 GTTGACTTAG
15795884 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15795910 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15795936 G
1 G
15795937 ATCAGATCGT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15796006 original size:898 final size:899
Alignment explanation
Indices: 15790228--15796981 Score: 8782
Period size: 900 Copynumber: 7.6 Consensus size: 899
15790218 GGTTGACTTA
*
15790228 GGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
1 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
15790293 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-TCCGCTCATTTCGTCGGTTGT
66 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCCGCTCGTTTCGTCGGTTGG
* * ** * ** *** *
15790357 CTTAGGCATACGAAGTTCATTCCCAGTCTACGATTAGACCAAACTAAGGGTTATGGTAGCAGGAT
131 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGAT
* * ** * *
15790422 CGGTAGCACGTAGAGGGGGACCTGGTCGATCGTCGGCTTGTGCATCCCGCCCCTCTGGCCGGTTG
196 CGGCAGCACGT-GAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGCTG
* * * * *
15790487 AGCGCCCGTACGCTCATTTAATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATA
260 AGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATA
* * * * * * * *
15790552 CGAAGTTCATTCCCAGTCTAATATCGGACCGGACTGAGGCTTGTGGCAGCACATGCTGGGCTTGG
325 CGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGG
* * * * * *
15790617 GCATGTGCTGGTGCCACAGTTTTCTTCGTCGGGGCACCATCGCTAGAGCATCACCCGAGAACCTG
390 GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGAACCTG
* * *
15790682 ATCGACGGCATTGGGGTTCCGACAATC--GGGGGCCGGGGGGGTGTGCGTACATGATGTGCGATG
455 ACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATG
*
15790745 GGTGCTGGTACTTGG-CCTTATATTGGCCCCCTATCCCGCATCAAACCTCGAGAACTCACACCCC
519 GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
*
15790809 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAAATGGGG
584 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG-AAATGGGG
*
15790874 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCA
648 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * *
15790939 TGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCC-AAAGTCCTTCCAAAAAAATTT
713 TGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
* *
15791003 TAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCTTGAAAAATAGAAAACGAGTCGTCTTGCCA
778 TAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCA
* *
15791068 TGAAACTTCACGTGAAGGCTTAAGGGACCACTGTATGAGTTTACAAGCCATAAAAAT
843 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
*
15791125 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCT
1 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
15791190 TGCGCATCTCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCGCTGGCCTGCTCGTTTTGTCGGT
66 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCT--CC-GCTCGTTTCGTCGGT
* * * * *
15791255 TAGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGGTCGAACCAGACCGAGGGTTGCAGTAGCAG
128 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAG
* * * ** * * * * *
15791320 GA-CTGACAGCATGTAGAGGTGGACCCGACCGAT-CCTGGCTTGCGCATCCCGCCTCTCTGGTCG
193 GATC-GGCAGCACGT-GAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCG
* * * *
15791383 GTTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCTTTCCCAGTCTAAG
256 GCTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * *
15791448 CATACGGAGTTCATTCCCAGTCTAAGATC-GAATCAGACCGAGGGTTGCAGTAGCACATGCTGGG
321 CATACGGAGTTCATTCCCAGTCTAAGATCAG-ATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * *
15791512 CTCAAGCATGTGCTGGTGCCGCATTTTTCTTTG-CTGGGGCACCATCGCCGGAGCATCACCGGAG
385 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCACTGGAGCATCGCCGGAG
* * * *
15791576 AACCTGACC-AGTGGCATTGGGGTTCCGGCGATCGGAGGGGCCGGGGGGTTGTGCGCACTTGATG
449 AACCTGACCGA-CGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGG-TGTGCGCACATGATG
* * *
15791640 TACGATGGGTGCTGGTACTT-GCCCTTATATTGGCCCCCTATCCCTCATGAAACCACGAGAACTC
512 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
15791704 ACACCTCCTTAAAGAGCATTTAAGATTTTACAGGTTTGTTG-CAGTAGCCATTAAAGTGTCTGAA
577 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
15791768 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
642 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * *
15791833 TTTGCATGCCAAAAAAAATATAAGGATCACGTCTA-CAGTGTTTGGGGCCAAAAATCCTTTCGAA
707 TGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCA-AGTTTGGGGCCAAAACTCCTTCCGAA
* *
15791897 AAAATTTTAAAAAATCTCGAACCATAAAAAGTTTCAAAAATCGTGAAAAATAGAAACCGAGTCGT
771 AAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* *
15791962 CTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTCTATGAATTTACAAGCCATAAAAAT
836 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** *
15792026 GGCATTGGCATGTAGAAATATGAAGATGTGCCTAAATCCACCTACCACCCTATCGATCCACGGCT
1 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * *
15792091 TGCGCATCCCGTCTCTCTGACCGACATAGTG-CTGCCCGCCCG-TCCGCTTGTTTCGTCGGTTGG
66 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCCGCTCGTTTCGTCGGTTGG
* * * * *
15792154 CTTAGGCATACGGAGTTCATTCCC-GACCTAAGATTGTACCAGATCGAGGGTTGCGGCA-CTAGG
131 CTTAGGCATACGGAGTTCATTCCCAG-TCTAAGATCGGACCAGACCGAGGGTTGCAGCAGC-AGG
** * * * * **
15792217 ATCGGCAGCACGCAAAGGGGGACCCAGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCAAC
194 ATCGGCAGCACG-TGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGC
*
15792282 TGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-A
258 TGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
*
15792346 T-C-G-G---------A--C------C-GA----ACCGAGGGTTGCGGCAGCATATGCTGGGC-C
323 TACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * * **
15792385 TGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGAGGCACCATCGCCAGAGCATCGCCGGAGAAC
388 -GGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGAAC
* * * *
15792450 TTGACCGACGGCATTGGGGTTTCGACGATC-GGGGGGCCGGGGGGTGTACGCATATGATGTGCGA
452 CTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
* * * *
15792514 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAACAAATCTTGAGAACTCACTCC
517 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
* *
15792579 CCCTTAATGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGG
582 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
* * * * *
15792644 GACATTTTTTTCAAATGGTCAAAAAATCTTATATACTTCGAGTTTTTAGCTGAATTTTTTTATGC
647 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* *
15792709 ATGCCAACAAAAATACAAGGATCACG--TACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATT
712 ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATT
* * *
15792772 TTACAAAATCTCGAACCGTAAAAAGTTTTAAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGC
777 TTAAAAAATCTCGAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
* *
15792837 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGCATGAATTTACAGGCCATAAAAAT
841 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
15792896 GGCATTGGCACACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCT
1 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * *
15792961 TGCGCATCCCATTTCTATGGCCGGAGTAGTGCCCGCCCGCCCGCCTGCCCGCTTGTTTCGTCGGT
66 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CT--CCGCTCGTTTCGTCGGT
* * * ** *** * *
15793026 TTGCTTAGGAATACGGAGTTCATTCCCAGTCTAAGATTGGACTGGACCGAGGGTTATGGTAGTAG
128 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAG
* * ** * * *
15793091 GATTGGCAGCACGTACAGGGGGACCCGACCGATCCCC-AGCTTGCGTATCCCGCCCCTCTGGTCG
193 GATCGGCAGCACGT-GAGGGGGACCCGGTCGATCCCCGA-CTTGTGCATCCCGCCCCTCTGGCCG
* * * *
15793155 GTTGAGCGCCCGCACGCTCGTTTCATGGGATGACTTAGGCATACGGAGTTCATCCCCAGTCTAAG
256 GCTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* ** * * *
15793220 CATACGGAGGTCATTCATAGTCTAAGAT-AGGATCGGACTGAGGGTTGCGACAGCACATGCTAGG
321 CATACGGAGTTCATTCCCAGTCTAAGATCA-GATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
15793284 CTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCAT--C----G--T---CGGAGA
385 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGA
* * *
15793338 ACCTGATCGACAGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
450 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTG
* * ** *
15793403 CGATGGGTGCTGGTGCTTGGCCCTTATGTTGGCCATCTATCCCTCATCAAGCCTCGAGAACTCAC
514 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
15793468 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTACCCATTAAAGTGTCTAAAAT
579 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
15793533 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATT-GAGTTTTTAGTTGAAGTTTTTT
644 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAATTTTTTT
* * * *
15793597 GTGCATGCCAACAAAAATACAAGGATCACATCCACCAAGTTTGGGGCCAAAACTCCTT-AGAAAA
708 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG-AAA
* ** *
15793661 AAATTTAAAAAAATCTCGAACCACAAAAAGTCTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
772 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
15793726 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
837 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
15793789 GGCATTGGCACATAGAAATATGAAGATGTACCAAAACCCACCTACCACCCTATCGATTCACGGCT
1 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
** * * * *
15793854 TGCGCATCCCGTCTCTCTACCCGACGTAGTGCCCGCCCGCTCACCCTCCCGCTTGTTTCATCGGT
66 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGC-C-CGCT-CCGCTCGTTTCGTCGGT
* * * **
15793919 TGGGTTAGGCATACGGAGTTCATTCCCAGTGTAAGATCAGACTGGACCGAGGGTTGCAGCAGCAG
128 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAG
* * * * *
15793984 GATTGACAGCACGCAGAGGAGGACCCGGTCGATCCCCGGCTTGTGCATCCCG-CCC-CTGGCCGG
193 GATCGGCAGCACG-TGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGG
* * * *
15794047 CTGAACACCCACACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGC
257 CTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * * * *
15794112 ATACGAAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTACGACAGCACATGCTGGGCC
322 ATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
** * *
15794177 CGGGCATGTATTGGTGCCGCATTTTTCTTCGTCGGGGCATCATCACCGGAGCATCGCCGGAGAAC
387 CGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGAAC
* * * * * * *
15794242 CTGACCGGCGGCATTAGGGTTCTGATGAT-TGGGGGGCGGGGGGGTGTGCACACATGATGTGCGA
452 CTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
*
15794306 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTGGAGAACTCACACC
517 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
15794371 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
582 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
* * * *
15794436 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAATTTTTTAGCAGAAGTTTTTTGTGC
647 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * * * *
15794501 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTCGGTGCCAAAACTCCTTTCAAAAAAATT
712 ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATT
* * ** *
15794566 TTAAAAAATC-CTGAACCGTAAAAAGTTTCGACAATAATGAAAAATAGAAAACGAGTCATCTTGC
777 TTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
*
15794630 CATGAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAAT
841 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
*
15794689 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCT
1 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * *
15794754 TGCGCATCCCGTCTCTCTGACCGACGTAGTGCACGGCCGCTCGCCTGCCCGCTCGTTTCGTCGGT
66 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CT--CCGCTCGTTTCGTCGGT
* * * * *
15794819 TGGCTTAGGCATACGGAGTTCATTCCCAGCCTAAGATCGGACCAGACCAAGGGTTGCAACAGTAA
128 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAG
* * * * * *
15794884 GATCGGTAGCAGGCAGAGGGGGACCCAGCCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGA
193 GATCGGCAGCACG-TGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGG
* * * *
15794949 CTGAGCACCCGTACACTCGTTTCATGGGTTGACTTAGTCATACAGAGTTCATTCCCAGTCTAAGC
257 CTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * * * *
15795014 ATATGGAGTTCATTTCCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGAACATGCTGGGCT
322 ATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
* * * *
15795079 CGGGCATGTGTTAGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGCAGCATCACCGGAGAAC
387 CGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGAAC
15795144 CTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
452 CTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
* * *
15795209 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTTACCCCTCATCAAACCTTGAGACCTCACAC
517 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC-TATCCCTCATCAAACCTCGAGAACTCACAC
*
15795274 CCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC-GAAATGG
581 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
15795338 GGACACTTTTTGCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTG
646 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * *
15795403 CATGCCAAAAAAAATACAAGGATCATGTCTACCAACTTTGGGGCCAAAAATCCTTCCGAAAAAAT
711 CATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * **
15795468 TTTAAAAAATCTTGAACCGTAAAAAGTTT-GAAAATCGTGAAAAATAGAAAACGAGTCGTCACGC
776 TTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
*
15795532 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTCATAAAAAT
841 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
15795591 GGCATT-G-ACATGCAGAAATAAGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGG
1 GGCATTGGCACAT--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * **
15795654 CCTGCGCATCCCGTCTCTCTGGCCGGTGTAGCGCCCGCCCGCCCGCT-CGCTCGTTTCGTCATTT
64 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCCGCTCGTTTCGTCGGTT
*
15795718 GGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACC-GAACCGAGGGTTGCAGCAGCAG
129 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCAGCAGCAG
* * * * *
15795782 GATTGGTAGCACGCTGAGAGGGACCCGGTCGATCCTCGACTTGTGCATCCCGCCCCTCTGGCTGG
193 GATCGGCAGCACG-TGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGG
* *
15795847 CTGAGCACCCGCACGTTTGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
257 CTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* *
15795912 ATACGGAGTTCATTCCCAGTCTAAGATCAGATCGTACCGAGGGTTGTGGCAGCACATGCTGGGCT
322 ATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
* * * * * * * * *
15795977 CGGGCAGGTGTTGGTGCTGTATATTTCTTC-ACTGGGGCACCATC-GTCGGAGCATCGTCAGAGA
387 CGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCACT-GGAGCATCGCCGGAGA
* * * * *
15796040 ACCTGACCGATGGCATTGGGGTTCAGGCGATCGGGGGGGCCGGGGGGGTGTACGTACATGATGTG
450 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTG
** *
15796105 CGATGGGTGCTTATAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
514 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
15796170 ACCCCCTTAAAAAGCAATTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
579 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
15796235 GGGGACAGTTTTTTCAAATTGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAATTTTTTTG
644 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
*
15796300 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTG-AAAA
709 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* ** * * *
15796364 ATTTTAAAAAATCTCAAACCGTAAAAAGTTTTGAAAATCATG-AAAATAAAAAACGGGTCGTCTT
774 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
15796428 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACATGCCATGAAAAT
839 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** * * *
15796489 TTCATTGGCACATAGAAATATGAAGATGTGCTTAAACCTACCGACCACCCTATCGATCCACGGCT
1 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * ** * * * *
15796554 TCCGCATCCCGTCTCTTTGGATGGCGTAGTGCCCGCCCACCCACCCACCCGCTTGTTTCGTCGGT
66 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC-GCC-CGC-TCCGCTCGTTTCGTCGGT
* * * ** * *
15796619 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCAAGGGTTGTGGTAGCTG
128 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAG
* * *
15796684 GATCGGCAGCACGTAGAGGGGGACTCGGTCGATCCCCGACTTGTGCATCCCGTCCCTCTGGTCGG
193 GATCGGCAGCACGT-GAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGG
** * *
15796749 CTGAGCACCTACACG--C---TCAT---TT--C----G--T--GG-GTT-A-----ACT-TAGGC
257 CTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * *
15796788 ATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTACGGCAGCACATGCTAGGCT
322 ATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
* * * *
15796853 CGGGCATGTGTTGGTGCCACATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAAC
387 CGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGAAC
* *
15796918 CTGATCGACGGCATTGGAGTTCCGAC-ATCGGGGGGGCCACGGGGGGTGTGCGCACATGATGTGC
452 CTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-C-CGGGGGGTGTGCGCACATGATGTGC
15796982 CTAAACCAAC
Statistics
Matches: 5151, Mismatches: 591, Indels: 251
0.86 0.10 0.04
Matches are distributed among these distances:
869 84 0.02
870 265 0.05
871 226 0.04
872 2 0.00
873 1 0.00
875 189 0.04
876 166 0.03
877 5 0.00
878 1 0.00
879 1 0.00
882 2 0.00
883 3 0.00
884 3 0.00
886 1 0.00
888 2 0.00
890 34 0.01
891 166 0.03
892 226 0.04
893 302 0.06
894 60 0.01
895 5 0.00
896 89 0.02
897 204 0.04
898 604 0.12
899 201 0.04
900 933 0.18
901 412 0.08
902 664 0.13
903 217 0.04
904 83 0.02
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (899 bp):
GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCCGCTCGTTTCGTCGGTTGG
CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGAT
CGGCAGCACGTGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCCGGCTGA
GCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC
GGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGG
CATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACTGGAGCATCGCCGGAGAACCTGA
CCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGG
TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
CAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAA
AAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
Found at i:15797512 original size:26 final size:26
Alignment explanation
Indices: 15797475--15797527 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
15797465 GTTGGCTTAG
*
15797475 GCATACGAAGTTCATTCCTAGCCTAA
1 GCATACGAAGTTCATTCCCAGCCTAA
*
15797501 GCATAC-AGAGTTCATTCCCAGTCTAA
1 GCATACGA-AGTTCATTCCCAGCCTAA
15797527 G
1 G
15797528 ACCGGACCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGCCTAA
Found at i:15802779 original size:26 final size:27
Alignment explanation
Indices: 15802745--15802795 Score: 77
Period size: 26 Copynumber: 1.9 Consensus size: 27
15802735 TTTCATCTTA
* *
15802745 AGACGTGGGAATGAACTCTGTATGCTT
1 AGACGTGGGAACGAACTCCGTATGCTT
15802772 AGAC-TGGGAACGAACTCCGTATGC
1 AGACGTGGGAACGAACTCCGTATGC
15802796 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
26 18 0.82
27 4 0.18
ACGTcount: A:0.27, C:0.20, G:0.29, T:0.24
Consensus pattern (27 bp):
AGACGTGGGAACGAACTCCGTATGCTT
Found at i:15803343 original size:76 final size:77
Alignment explanation
Indices: 15803185--15803348 Score: 224
Period size: 76 Copynumber: 2.2 Consensus size: 77
15803175 GATTTTGGAA
* * * * * * * *
15803185 ACTTTTTGCGGTTCGGGATTTTTTAGAATTTTTTCGGAAGGCCTTTTGGCCCCAAACTTGGTAGA
1 ACTTTTTGTGGCTCGAGATTTTTTAAAATTTTTTCGAAAAGACTTTTGGCCCCAAACTTGCTAGA
15803250 CGTGATCCTTGT
66 CGTGATCCTTGT
*
15803262 A-TTTTTGTGGCTCGAGATTTTTTAAAATTTTTTC-AAAAGATTTTTGGCCCCAAACTTGCTAGA
1 ACTTTTTGTGGCTCGAGATTTTTTAAAATTTTTTCGAAAAGACTTTTGGCCCCAAACTTGCTAGA
15803325 CGTGATCCTTGT
66 CGTGATCCTTGT
*
15803337 ACTTTTTTTGGC
1 ACTTTTTGTGGC
15803349 ATGCAAAAAA
Statistics
Matches: 76, Mismatches: 10, Indels: 3
0.85 0.11 0.03
Matches are distributed among these distances:
75 37 0.49
76 38 0.50
77 1 0.01
ACGTcount: A:0.20, C:0.17, G:0.21, T:0.43
Consensus pattern (77 bp):
ACTTTTTGTGGCTCGAGATTTTTTAAAATTTTTTCGAAAAGACTTTTGGCCCCAAACTTGCTAGA
CGTGATCCTTGT
Found at i:15803748 original size:26 final size:26
Alignment explanation
Indices: 15803719--15803771 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15803709 CCGATCCGAT
15803719 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15803745 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15803771 C
1 C
15803772 CTGAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15804661 original size:26 final size:26
Alignment explanation
Indices: 15804621--15804673 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15804611 CTGGTTCAAT
* *
15804621 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACCCCGTATG
15804647 CTTAGACTGGAAATGAACCCCGTATG
1 CTTAGACTGGAAATGAACCCCGTATG
15804673 C
1 C
15804674 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACCCCGTATG
Found at i:15805101 original size:902 final size:900
Alignment explanation
Indices: 15803263--15808188 Score: 6032
Period size: 902 Copynumber: 5.5 Consensus size: 900
15803253 GATCCTTGTA
* * * *
15803263 TTTTTGTGGCTCGAGATTTTTTAAAATTTTTTCA-AAAGATTTTTGGCCCCAAACTTGCTAGACG
1 TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACG
* * *
15803327 TGATCCTTGTACTTTTTTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAACTGTACAAGATT
66 TGATCCTTGTATTTTTTTTGGCATGC-AAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* *
15803392 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTCATGGCTACTGGCAGCAAACCTGT
130 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15803457 AAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAAT
195 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * *
15803522 ATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCGCCCCCCAGCCCCCCTGAG
260 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA---CCCCCCGGCCCCCC-GAT
* * * * * *
15803587 CGCCGGAACCCCAATGTCGCTGGTCAGGTTCTCCGACGATGCTCCGGTGATGGTGCCCCGATGAA
321 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAA
* * * * *
15803652 GAAAAAAGTGGCACCAACACATGCTCGAGCCCAGCATGTGCTGCCGGAAGCCTCAGTCCGATCCG
386 GAAAAATGTGGCACCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT-CG
* *
15803717 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTGAGTCAAC
450 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * * *
15803782 CCACGAAATGAGCGTGCGGGTGCTCAGCCGGCCAAAGGGGCGGGATGCGTAAGCCAGGGATAGTC
515 CCACGAAACGAGCGTGCGGCTGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCCGGGATCGAC
* * * * * * * **
15803847 CAAGTCTCCCTCTACGTGTTACTGATCTTACTGTCGCAACCCTC-GATTAGGT-TCGATCTTAGA
580 CAGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGTCGCAACCCTCAG-TCCGGTCT-GATCTTAGA
* * * *
15803910 CTGGGAATGAACTCCGAATGCCTAAGCCAACCGATGAAACGAGCGCGCGGGTGGGCGGGCGGGCA
643 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCA
* * * * *
15803975 CTACGTCGGCCAGAGAGTCGAGATGCGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGTTTAGGC
708 CTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *
15804040 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAGTTCATACAACGGTCCCCT
773 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* * **
15804105 AAGCCTTTACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTTGAAAC
838 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAAC
* *
15804168 TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACATGGTAGACA
1 TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACG
** *
15804233 TGATCCTTGTA-TTTTTTTGGCATGCTCAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATGT
66 TGATCCTTGTATTTTTTTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* * *
15804297 TATGACCGTTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
131 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
15804362 AAATCTCAAATGCTCTTTAAGGGAGTATGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATA
196 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* *
15804426 TAAGGGCCAAGTACCAGCACCTATCACACATCATGTGCGCACACACCCCCCGGCACCCCCGATCG
261 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCCCCCGGC-CCCCCGATCG
* * * * *
15804491 TCGGAACCCCAATGCTGCCGGTCAGGTTCTTCGACG-TCGCTCCGACGATGGTGCCCCGACGAAA
323 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT-GCTCCGGCGATGGTGCCCCGACGAAG
* * * * * * *
15804555 AAAAATGGGGCACCAACACATGCTAGAGCCCAGCATGTGTTGCTGCAACCCTTGGTCTGGTTCAA
387 AAAAATGTGGCACCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG-TCGA
* *
15804620 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAAATGAACCCCGTATGCCTAAGTCAACC
451 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * *
15804685 CATGAAATGAGCGTGCGGCTGCTCAACCGGCCAGAGGGGCAGGATGGGCAAGCCCGAGATTGACT
516 CACGAAACGAGCGTGCGGCTGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCCGGGATCGACC
* * *
15804750 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAG-CACAACCCTCAGTCCGGTCTGATCTTAGACT
581 AGGTCCCCCTCTGCGTGCTGCTGATCCTGCT-GTCGCAACCCTCAGTCCGGTCTGATCTTAGACT
* * *
15804814 AGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGAGCGGGCACT
645 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACT
* *
15804879 ACACCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATATGGTGGTA-GTCGGGTTTAGGCA
710 ACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT-GGGTTTAGGCA
* *
15804943 CATCTTCATATTTCTACATGCCAATGCCATTATTATGGCTTGTAAATTCATACAATGGTCCCTTA
774 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * *
15805008 AGCCTTCTCGTGAAGTTTCATTAG-AAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAAC
839 AGCCTTCACGTGAAGTTTCA-TGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAAC
* * * *
15805070 TTTTTGCGGTTCGAGATTTTTAAAAATTTTTTCAGAACGATTTTTAGACCCAAACTTGGTAGACG
1 TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACG
* **
15805135 TAATCCTTGTATTTTTTTTGGCAACCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
66 TGATCCTTGTATTTTTTTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
** * ** *
15805200 TTACGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTGATGGCTACTGATAGCAAGCCTGT
130 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15805265 AAAATCTCAAATGCTCTTTAAGGGGGTGTGTGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAAT
195 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* *
15805330 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACA--------CCCCACGATCGTC
260 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTC
* * *
15805387 GGAACCCCAATGTCCGTCGGTCAGGTTTTCTGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAA
325 GGAACCCCAATG-CCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAA
* *
15805452 AAATATGGCACCAACACATGC-CTGAGCCCAGCATGTGCTGCCGTGAA-CCTCGGT-C---CGA-
389 AAATGTGGCACCAACACATGCTC-GAGCCCAGCATGTGCTGCCG-CAACCCTCGGTCCGGTCGAT
*
15805510 --T---C------T--A------ATG-TTAGACTGGGAATGAACTCCGTATGCCTAAATCAACCC
452 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * * * * *
15805555 ACGAAACGAGCATACGGGTGCTCAGCCGGCCAGAGTGGC-GGCATGCGTAAGCCTGGGATCGATC
517 ACGAAACGAGCGTGCGGCTGCTCAGCCGGCCAGAGGGGCAGG-ATGCGCAAGCCCGGGATCGACC
* * * * *
15805619 GGGTCTCCCTCTGCATG-T--TG----T-C-GT---AACCCTCAGTTCGGTCTGATCTTTGACTG
581 AGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCTGATCTTAGACTG
* * * * * * * *
15805672 GGAATTAACTCTGTATGCCTAAGCCTATCGACAAAACGAGCGGGCAGGCGGGCGGACGGGCACTA
646 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTA
* * * * *
15805737 CGCCGACCCGAGAGACGGGATGCGTAAGTCGTGGATCGATAGGGTGGTACGTTGGTTTAGGCACA
711 CGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
*
15805802 TCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
776 TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
*
15805867 CCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTA-TTTTCACAATTTTTGAAAC
841 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAAC
* * * * *
15805926 TTTTTACAGTTC-AGGATTTTTAAAAATTTTTTCAGAAGAATTTTTAGCCCCAAACTTGGTAGAC
1 TTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGAC
* * * *
15805990 GTGATCCATGTATTTTTTTTTGCATGCAAAAAAAAATTAATCTAAAAACTCGAAGTGTACAAGAT
65 GTGATCCTTGTATTTTTTTTGGCATGC-AAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * *
15806055 TTTGTGACCATTTGAAAAAAGTGTCTCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACTTG
129 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
15806120 TAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
194 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * * *
15806185 TATAGGGGACAAGTACCAGCACCCATCGTACATCATGTGTGCACACCCCCCGGCCCCCCCGATCA
259 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCG
* ** * *
15806250 CCAAAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCC-AGTGAAG
323 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGA-CGAAG
* * *
15806314 AAAAATGCGGCACCAACACATGC-CTGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGGTCTG
387 AAAAATGTGGCACCAACACATGCTC-GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC-G
* * * *
15806378 ATCTTAGACTTGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTTCGTATGCCTATGTCAAC
450 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
** * * * * *
15806443 CCATTAAACGAGCGTGCGGGC-GCTCAGTCGGCCGGAGGGGCGGGATACACAAG-CCGAGGATCG
515 CCACGAAACGAGCGTGC-GGCTGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCCG-GGATCG
* * * * * *
15806506 ACCAGGTCGCCCTCTACGTGCTGCTGATCATGCTGTCGTAACCCTTAGTCCAGT-TCGATCTTAG
578 ACCAGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCT-GATCTTAG
* *
15806570 ACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGC-AGGCGGGCGGGCGGGTGGG
642 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGA-GCGGGCGGGCGGGCGGG
* * * * **
15806634 CACTACGCCGGCTAGAGAGACGGGATGCACAAGCCGTGTATTTATAGGGTGGTAGGTGGGTTTAG
706 CACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * * * *
15806699 GCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTTATAAAACGGACCC
771 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
***
15806764 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT-TGAATTTTTCACAATTTCCAAA
836 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT--ATTTTTCACAATTTTTGAA
15806828 AC
899 AC
* * * * * * *
15806830 TTTTTACAGTCCGGGATTTTTTAAAATTTTTT-TGAAAGAATTTTTGGCTCCAAACTTGGTAGAC
1 TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAG-AAGGATTTTTGGCCCCAAACTTGGTAGAC
*
15806894 GTGATCCTTGTATTTTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAG
65 GTGATCCTTGTA--TTTTTTTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
15806959 ATTTTGTGACCTTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACC
127 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * *
15807024 TATAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTATCGAGGTTTGATGAGGGATAGGGGGCC
192 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
15807089 AATAAAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGAT
257 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGAT
* * * ** * ** *
15807154 CATTGGAACCCAAATGCCATCGGTCAGGTTCTCCGGCGATGCTCCGGTGATGGTGCCTTG-TGAA
321 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAA
** * * * * * *
15807218 GAAAAATGTGGCACCAGTACATGCCCGAGCCCACCATGTCCTGTCGTAACCCTAGGTCCGGTCCG
386 GAAAAATGTGGCACCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT-CG
* * *
15807283 ATCTTAGACTGGGAATGAACTCCATATGCTTAGGCTGGGAATGAACTCCATATGCCTAAGTCAAC
450 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* ** * * *
15807348 CCACGAAACGAGCGTACGGGC-GCTCAGCTAGCCAGAGGGGTAGGATGCGCAAGTCGGGGATCTG
515 CCACGAAACGAGCGTGC-GGCTGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCCGGGATC-G
* * * * * * * **
15807412 -CCCGGTCCCTCTCTGCATGCTGCCGATCTTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGA
578 ACCAGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCTGATCTTAGA
* * *
15807476 CTGGGAATGAACTCCGTATGCCTAAGCCAACTGACG-AA--A-TGAGCGGGCGGGCGGGTGGGCA
643 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCA
* * * * * * *
15807537 CCACGCCGTCCCGAGAGACGGGATGCGCAAACCGTGGATCGATAAGGTGGTAAGTGGGTTTTGGC
708 CTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
** * *
15807602 ACATCTTCATAATTT-TGTGTGCCAATGCCATTTTTATGCCTTGTAAATTCAAACAATGGTCCCT
773 ACATCTTCAT-ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * ** * **
15807666 TTAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCAATTTCTATTTTTCACGATTTTCAAAAC
837 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAAC
* *
15807730 TTTTTGCGGTCCGAGATTTTTTAAAATTTTTT-AGGAAGGAGTTTTGG-CCCAAACTTGGTAGA-
1 TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCA-GAAGGATTTTTGGCCCCAAACTTGGTAGAC
* *
15807792 -TG---C----A--------AGCA--C-AAAAAAATTCAGCTAAAAACTCGAAGTTTACAAGATT
65 GTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15807838 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACCTGT
130 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15807903 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAAT
195 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * *
15807968 ATAAGGGCCAAGTACCAGCACCTATTGCACATCATTTGCGCACACCCCCCGGCCCCCCCGATCGT
260 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGT
* * *
15808033 CGGAACCCCAATGCCGTCGGTCAGGTTCTCTGGCAATGCTCCGGCGATGGTGCCCCGACGAAGAA
324 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAA
* * * * * * *
15808098 AAATGTGGCACTAGCACATGCCCGAGCCCATCATGTGCTACCGCAACCCTCAGTCTGGTCTGATC
389 AAATGTGGCACCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC-GATC
15808163 TTAGACTGGGAATGAACTCCGTATGC
453 TTAGACTGGGAATGAACTCCGTATGC
15808189 CTAAGCCAAT
Statistics
Matches: 3488, Mismatches: 433, Indels: 228
0.84 0.10 0.05
Matches are distributed among these distances:
855 1 0.00
856 293 0.08
857 234 0.07
858 2 0.00
859 1 0.00
861 1 0.00
862 1 0.00
863 3 0.00
864 92 0.03
865 21 0.01
866 1 0.00
868 4 0.00
869 99 0.03
870 3 0.00
872 1 0.00
875 9 0.00
876 260 0.07
877 84 0.02
878 2 0.00
880 3 0.00
881 1 0.00
883 1 0.00
884 1 0.00
887 1 0.00
889 5 0.00
890 92 0.03
891 5 0.00
893 2 0.00
894 24 0.01
895 86 0.02
896 3 0.00
897 3 0.00
898 1 0.00
899 16 0.00
900 58 0.02
901 165 0.05
902 804 0.23
903 75 0.02
904 373 0.11
905 342 0.10
906 307 0.09
907 8 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (900 bp):
TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACG
TGATCCTTGTATTTTTTTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCG
GAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAA
ATGTGGCACCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCGATCTTA
GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
AACGAGCGTGCGGCTGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCCGGGATCGACCAGGTC
CCCCTCTGCGTGCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAAT
GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCG
ACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAAC
Found at i:15806409 original size:26 final size:26
Alignment explanation
Indices: 15806380--15806432 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15806370 CCGGTCTGAT
15806380 CTTAGACTT-GGAATGAACTCCGTATG
1 CTTAGA-TTGGGAATGAACTCCGTATG
*
15806406 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
15806432 C
1 C
15806433 CTATGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 2 0.08
26 23 0.92
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCGTATG
Found at i:15807321 original size:26 final size:26
Alignment explanation
Indices: 15807285--15807337 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15807275 CCGGTCCGAT
15807285 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15807311 CTTAGGCTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15807337 C
1 C
15807338 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15808910 original size:26 final size:26
Alignment explanation
Indices: 15808881--15808933 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15808871 CCGGTTTGAT
*
15808881 CTTAGACTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15808907 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15808933 C
1 C
15808934 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15810696 original size:26 final size:26
Alignment explanation
Indices: 15810646--15810698 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15810636 CCAGTCTGAT
* * **
15810646 CTTAGGCTGGGAATCAACTTTGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
15810672 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
15810698 C
1 C
15810699 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:15811578 original size:26 final size:26
Alignment explanation
Indices: 15811549--15811601 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15811539 CCGGTCCGAT
*
15811549 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15811575 CTTAGGCTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15811601 C
1 C
15811602 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15813160 original size:26 final size:26
Alignment explanation
Indices: 15813131--15813182 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15813121 CCGATCCTAT
*
15813131 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15813157 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15813183 GCTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15814732 original size:871 final size:873
Alignment explanation
Indices: 15812095--15816885 Score: 5772
Period size: 871 Copynumber: 5.4 Consensus size: 873
15812085 GTTGGTTTAG
* *
15812095 GCACATCATGTGCGCACACCCCCCCGTGGCCCCTCCGATCGTC-AGAACTCCAATGCCGTCGATC
1 GCACATCATGTGCGCACACCCCCCC--GGCCCCCCCGATCGTCGA-AACCCCAATGCCGTCGATC
** * * *
15812159 AGGTTCTCCGGCGATGCTCCGGTGATGGTGCCCCAACGAAGAAAAATATGGCACCAACACATGCC
63 AGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCC
* * *
15812224 CGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCC-GATCCGATCTTAGACTGGAAATGAACTCCA
128 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGATCCGATCTTAGACTGGGAATGAACTCCG
* * * * * * *
15812288 TATGCCTAAGTTAACCCACGAAATGAGCGTGTAGGG-GCTCATCCGACCAGAGGGACGGGATACG
193 TATGCCTAAGTCAACCCACGAAACGAGCGTG-CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCG
* * * * *
15812352 CAAGTCGGGGATCGACCGAGTCCCCCTCTACGTGCTGTCGATCCAGCTACCACAACCCTTGATCT
257 CAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATCCAGCTACCGCAACCCTCGATCC
*
15812417 GGTCTGATCTTAGACTGGGAATGAACTCCTTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGG
322 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGC---
* * * * *
15812482 TGGGTGGGCGGGCACTACGTCGGCCAAAGAGACGGGATGCGAAAGCCGTGGATCGATAGCGTGGT
384 -GGGCGGGC-AGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * ** ** * *
15812547 CGGTGGGTTTAAGCACATCTTCATATTTCTATGTGCCAATGAAATTTTCATGGCATGTAAATTCA
447 AGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
15812612 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC-CTGTTTTCTATTTTTCA
512 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC-GTTTTCTATTTTTCA
* * *
15812676 TGATTTTCGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCA
576 TGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* *
15812741 AACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCCA
641 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* *
15812806 AGTGTACAAGATTTTGTGACAATTTGAAAAAACTGTCCCCATTTCAGACACTTTAATGGCTACTG
706 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* *
15812871 GCAGCAAACCTGTAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCGAGGCTTGATGAGGG
771 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGG
*
15812936 ATAGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATC
835 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
15812975 GCACATCATGTGCGCACACCCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGATCAGG
1 GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGATCAGG
*
15813039 -T-T----C--T--T--GACGATGGTGCCCC-AGCGAAGAAAAATGTGGGACCAGCACATGCCCG
66 TTCTCCGGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGTGGCACCAGCACATGCCCG
** **
15813091 AGCCTGGCATGTGCTGTTGCAACCCTCAGTCCGATCCTATCTTAGACTGTGAATGAACTCCGTAT
130 AGCCCAGCATGTGCTGCCGCAACCCTC-G---G------TC-----C-----A-G-A-TCCG-AT
* *
15813156 GCTTAGACTGGGAATGAACTCCGTATGGCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
171 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
15813221 CGGGCCAGAGGGGCGGGATACGCAAGCCGGGGATCG-TCGGGTCCCCCTGTACGTGCTGCCGATC
235 CCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATC
** *
15813285 CTA-CTACCATAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
300 C-AGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
15813349 AACTGACGAAACAAGCGGGCGGGC-TG--GCACTACGTCGGCCAGAGAAATGGGATGCGCAAGCT
364 AACCGACGAAACAAGCGGGCGGGCGGGCAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
* *
15813411 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGCCATTT
429 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* * **
15813476 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAATATAAC
494 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * **
15813541 TCGTTTTCTATTTTTCATGATTTTTTAAAACTTTTTACGGTTCGAGATTTTGTAAAATTTTTTTG
559 TCGTTTTCTATTTTTCATGA-TTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
15813606 GAAGGAGTTTTGGCCCCAAACTTGGT--ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
623 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * *
15813669 ATTCAGCTAAAAACTCGAAGTATATAAGATTTTTTGACCATTTGAAAAAAATGTCCCCATTTCAG
688 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
15813734 ACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGAGTGAGTTC
753 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTC
* *
15813799 TCGAGATTTGTTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
818 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
15813855 GCACATCATATGCGCACA-CCCCCTGGCCCCCCCGATCGTCGAAACCCCAATGTCGTCGGTCAAG
1 GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGATCAGG
* * *
15813919 TTCTCCGACGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCC-A
66 TTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGA
* * *
15813983 GGCCCAGCATATGCTGCCACAACCCTCGGTCCAG-TCCGATCTTAGATTGGGAATGAACTCCGTA
131 -GCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTA
* * *
15814047 TGCCTAAGTCAACCCACGAAATGAGCATGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
195 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* ** * * * * * * *
15814112 GCCAAGGATCGACTGGGTCCCCCTTTGCGTGCTGCCGATCCAGGTGCCGCAACCCTCAATCTGGT
260 GTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATCCAGCTACCGCAACCCTCGATCCGGT
* * *
15814177 AC-AATCTTAGGCTGGGAATGAAGTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCG
325 -CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCG
* *
15814241 GGCAGCACTACGTCGGTCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGG
389 GGCAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
15814306 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
454 TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
15814371 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGGTTTT-TATTTTTCATGATTTT
519 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC-GTTTTCTATTTTTCATGATTTT
* * * * ** **
15814435 TGAAACTTTTTATGGTTCAAGATTTTTTTAAATTTTTTCAGAAGGATTTTTCACCCCAAACACGG
583 TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* *
15814500 TAGACGTGATCCTTATATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
648 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
15814565 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAA
713 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * **
15814630 ACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGTGGTTTCATGAGGGATAGGAA
778 ACCTGTAAAATCTCAAATGCTCTTTAAGG-GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
15814695 GCCAATATAA-GGACAAGTACCAGCACCCATT
842 GCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
15814726 GCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGATCAG
1 GCACATCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGATCAG
* * ** *
15814791 GTTCT-C--CGA--CT------ATGCTGCCCCGACGAAGTAAAATACGGCACAAGCACATGCCCG
65 GTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCG
* ** * * * *
15814845 AGCCTAGCATGTGCTATCGCAACCCTCGATCC-GGTCTGATGTTAGACTGGGAATGAACTCCGTA
130 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTA
* * * **
15814909 TGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCTGCCAGTGGGTAGGGATGCGCAA
195 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * * *
15814974 GTCGAGGATCGACCGGGTCCCCCTCTTCGTGCTGTCGATCCTGCTGCCGTAACCTTTGGTCCGGT
260 GTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATCCAGCTACCGCAACCCTCGATCCGGT
** * * * * * *
15815039 CCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCGAGCTGACAAAACGAGCGGGCGGGCGG
325 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-A---AGCGGGCGG
* * *
15815104 GCGGCCCGGCGAACACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
386 GC-G---GGC-AGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* *
15815169 TAGGTGGGTTTGGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTT
446 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
15815234 ATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCA
511 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* *
15815299 TAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCAA
576 TGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* * *
15815364 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAAAATTCGGCTAAAAACTCGA
641 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* *
15815429 AGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTGCCCATTTCAGACACTTTAATGGCTACTG
706 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* *
15815494 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGGTGAGTTTTCGAGGTTTGAAGAGGG
771 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGT-GTGAGTTCTCGAGGTTTGATGAGGG
15815559 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
835 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * *
15815598 GCACATCATGTGTGCACACCCCCTCGGCCCCCCCGATCGTCGGAACCCCAATGCCATCGATCAGG
1 GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGATCAGG
*
15815663 TTCTCCGGCGATGCTCCGACGATGGTGCCCCGAAGAAGAAAAATGTGGCACCAGCACATG-CCGA
66 TTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGA
* *
15815727 GCCCAGCATGTACTGTCGCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGCACTCCGTATG
131 GCCCAGCATGTGCTGCCGCAACCC----T-C-G---G-TC-----C-----A-G-A-TCCG-AT-
* ** *
15815792 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCGTGCGGGTACTCAGT
171 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *** *
15815857 CGACCAGAGGGGCGGGATGCACAAGTCGGGGATC-AGCTGGGTCCCCCTCTGTATGCTGCCAATC
236 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGA-CCGGGTCCCCCTCTACGTGCTGCCGATC
* * * * ** * * *
15815921 CTGCTACTGCAACCCTCTATCCGGTCTGATATTAGACTTTGAATGAACTCCATATGCATAAGCCG
300 CAGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15815986 AGCGGCGAAACAA----GCGGGC--G-AGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
365 ACCGACGAAACAAGCGGGCGGGCGGGCAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
15816044 TGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
430 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
15816109 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAATACGACT
495 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
** * * **
15816174 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTTGGGATTTTTTAAAATTTTTTTGGA
560 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
** * *
15816239 AGGAGTTTTGAACCCAAACTTGGTAGACGTGATCGTTGTATTTTTGTTGGCATGCACAAAAAATT
625 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* **
15816304 TCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACTTTTTGAAAAAAGTGTCCCCATTTCAGAC
690 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * **
15816369 ACGTTAATGGCTACTGGCGGCAAACAAGTAAAA-CTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
755 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCT
15816433 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
819 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * * *
15816488 ACACATCATGTGCGCACACCACCCCCGG-CCACCTGATCG-CCAGAACCCCAATGCCGCCGGTCA
1 GCACATCATGTGCGCACACC-CCCCCGGCCCCCCCGATCGTCGA-AACCCCAATGCCGTCGATCA
** * * * *
15816551 ATTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCATATGCCC
64 GGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCC
*
15816616 GAGCCCAGCATGTGCTGCCGAAACCCTCCGTCCGGTCTAATCTTAGACTAGGAATGAACTCTGTA
129 GAGCCCAGCATGTGCTGCCGCAA--C-CC-T-CGG-----TC-----C-A-G-AT---C-C-G-A
* * *
15816681 TGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCA-TAAAAGAAGCGTGCGGGCGCTC
170 T-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG-AGCGTGCGGGCGCTC
* * ** * * * * *
15816745 AACCGGCTAGAGGGGTAGGATGCGCAAGCCGGGGATCG-TCGGATCCCCCTATTCGTGCTGCCGA
233 AGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGA
* * * ** * *
15816809 TCCTGCTGCCGCAACCCTTGGGCTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGC
298 TCCAGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
15816874 CAACCGACGAAA
363 CAACCGACGAAA
15816886 TGAGTGGGCG
Statistics
Matches: 3381, Mismatches: 400, Indels: 250
0.84 0.10 0.06
Matches are distributed among these distances:
861 2 0.00
862 239 0.07
863 2 0.00
864 1 0.00
865 64 0.02
866 102 0.03
867 101 0.03
868 8 0.00
869 60 0.02
870 183 0.05
871 654 0.19
872 77 0.02
873 44 0.01
874 3 0.00
875 3 0.00
876 3 0.00
877 33 0.01
878 2 0.00
879 7 0.00
880 139 0.04
881 170 0.05
882 202 0.06
883 64 0.02
885 2 0.00
886 6 0.00
887 6 0.00
888 3 0.00
889 6 0.00
890 369 0.11
891 582 0.17
892 62 0.02
893 3 0.00
894 2 0.00
896 1 0.00
899 6 0.00
903 1 0.00
905 3 0.00
906 4 0.00
907 162 0.05
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (873 bp):
GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGATCAGG
TTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGA
GCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
TCGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATCCAGCTACCGCAACCCTCGATCCGGTC
TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCGGG
CAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAG
ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATC
Found at i:15815795 original size:26 final size:26
Alignment explanation
Indices: 15815766--15815818 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15815756 CCGGTCCGAT
*
15815766 CTTAGACTGGGAATGCACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15815792 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15815818 C
1 C
15815819 CTAAGTGAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15816260 original size:891 final size:891
Alignment explanation
Indices: 15815111--15816739 Score: 2593
Period size: 891 Copynumber: 1.8 Consensus size: 891
15815101 CGGGCGGCCC
15815111 GGCGAACACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
1 GGCGAACACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
15815176 GTTTGGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTTATACAAT
66 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
15815241 GGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTT
131 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTT
*
15815306 TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCAAAACTTGG
196 TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGACCCAAAACTTGG
* *
15815371 TAGACGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAAAATTCGGCTAAAAACTCGAAGTGTAC
261 TAGACGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAAAATTCAGCTAAAAAATCGAAGTGTAC
* *
15815436 AAGATTTTGGGACCATTTGAAAAAAGTGTGCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
326 AAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACGTTAATGGCTACTGGCAGCAA
** *
15815501 ACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGGTGAGTTTTCGAGGTTTGAAGAGGGATAGGG
391 ACAAGTAAAA-CTCAAATGCTCTTTAAGGGGGT-GTGAGTTCTCGAGGTTTGAAGAGGGATAGGG
* * * *
15815565 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACC-CCCTCGGCCCC
454 GGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCACCCCCGG-CCA
* * * *
15815629 CCCGATCGTCGGAACCCCAATGCCATCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
518 CCCGATCGCCAGAACCCCAATGCCACCGATCAAGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
* * * **
15815694 GAAGAAGAAAAATGTGGCACCAGCACATG-CCGAGCCCAGCATGTACTGTCGCAACCCTTGGTCC
583 GAAGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTACTGCCGAAACCCTCCGTCC
* * * *
15815758 GGTCCGATCTTAGACTGGGAATGCACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
648 GGTCCAATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAA
* *
15815823 GTGAACCCACGAAACG-AGCGTGCGGGTACTCAGTCGACCAGAGGGGCGGGATGCACAAGTCGGG
713 GTCAACCCA-GAAAAGAAGCGTGCGGGTACTCAGTCGACCAGAGGGGCGGGATGCACAAGTCGGG
15815887 GATCAGCTGGGTCCCCCTCTGTATGCTGCCAATCCTGCTACTGCAACCCTCTATCCGGTCTGATA
777 GATCAGCTGGGTCCCCCTCTGTATGCTGCCAATCCTGCTACTGCAACCCTCTATCCGGTCTGATA
15815952 TTAGACTTTGAATGAACTCCATATGCATAAGCCGAGCGGCGAAACAAGCG
842 TTAGACTTTGAATGAACTCCATATGCATAAGCCGAGCGGCGAAACAAGCG
* * *
15816002 GGCGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTTGGTGG
1 GGCGAACACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
15816067 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
66 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
15816132 GGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAATACGACTCGTTTTCTATTTTTCATGATTTT
131 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTT
** * * **
15816197 TGAAACTTTTTGTGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGAACCC-AAACTTG
196 TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG-ACCCAAAACTTG
* * * *
15816261 GTAGACGTGATCGTTGTATTTTTGTTGGCATGCACAAAAAATTTCAGCTAAAAAATCGAAGTGTA
260 GTAGACGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAAAATTCAGCTAAAAAATCGAAGTGTA
* ** *
15816326 CAAGATTTTGTGACTTTTTGAAAAAAGTGTCCCCATTTCAGACACGTTAATGGCTACTGGCGGCA
325 CAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACGTTAATGGCTACTGGCAGCA
*
15816391 AACAAGTAAAACTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
390 AACAAGTAAAACTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAAGAGGGATAGGGG
15816456 GCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCACCCCCGGCCACC
455 GCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCACCCCCGGCCACC
* * * * * *
15816521 TGATCGCCAGAACCCCAATGCCGCCGGTCAATTTCTCCGGTGATGCTCCGACGATGGTGCCCCGG
520 CGATCGCCAGAACCCCAATGCCACCGATCAAGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGA
* * *
15816586 CGAAGAAAAATGCGGCACCAGCATATGCCCGAGCCCAGCATGTGCTGCCGAAACCCTCCGTCCGG
585 AGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTACTGCCGAAACCCTCCGTCCGG
* *
15816651 TCTAATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGT
650 TCCAATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGT
*
15816716 CAACCCATAAAAGAAGCGTGCGGG
715 CAACCCAGAAAAGAAGCGTGCGGG
15816740 CGCTCAACCG
Statistics
Matches: 668, Mismatches: 65, Indels: 10
0.90 0.09 0.01
Matches are distributed among these distances:
890 183 0.27
891 482 0.72
892 3 0.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (891 bp):
GGCGAACACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTT
TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGACCCAAAACTTGG
TAGACGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAAAATTCAGCTAAAAAATCGAAGTGTAC
AAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACGTTAATGGCTACTGGCAGCAA
ACAAGTAAAACTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAAGAGGGATAGGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCACCCCCGGCCACCC
GATCGCCAGAACCCCAATGCCACCGATCAAGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGAA
GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTACTGCCGAAACCCTCCGTCCGGT
CCAATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTC
AACCCAGAAAAGAAGCGTGCGGGTACTCAGTCGACCAGAGGGGCGGGATGCACAAGTCGGGGATC
AGCTGGGTCCCCCTCTGTATGCTGCCAATCCTGCTACTGCAACCCTCTATCCGGTCTGATATTAG
ACTTTGAATGAACTCCATATGCATAAGCCGAGCGGCGAAACAAGCG
Found at i:15816693 original size:26 final size:26
Alignment explanation
Indices: 15816657--15816709 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15816647 CCGGTCTAAT
*
15816657 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15816683 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15816709 C
1 C
15816710 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15817799 original size:26 final size:26
Alignment explanation
Indices: 15817770--15817822 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15817760 CTGATCCGAT
* *
15817770 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15817796 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15817822 C
1 C
15817823 CCAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15823092 original size:26 final size:26
Alignment explanation
Indices: 15823054--15823106 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15823044 CCTGTCTGAT
* *
15823054 CTTAGATTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15823080 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15823106 C
1 C
15823107 CTAAGCAACC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15823994 original size:26 final size:26
Alignment explanation
Indices: 15823958--15824010 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15823948 TGGATCGGAT
*
15823958 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
15823984 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
15824010 C
1 C
15824011 CAAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTATG
Found at i:15824830 original size:26 final size:26
Alignment explanation
Indices: 15824801--15824853 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15824791 CCGATCCGAT
15824801 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15824827 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15824853 C
1 C
15824854 CCAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15825282 original size:844 final size:853
Alignment explanation
Indices: 15823483--15837075 Score: 10727
Period size: 844 Copynumber: 15.6 Consensus size: 853
15823473 TTGTTTTCTA
* ** * * *
15823483 TTTTCCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGTGTTTT
1 TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
* * * * *
15823548 GGCCCCAAGCTTGGTACACGTGATCCTTGTATTTTTGTTGTCATGCATAAAAAAATTCACCTAAA
66 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
15823613 AACTCGAAGTGTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATG
131 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
*
15823678 GCTACTGGCAGCAAACCTGTAAAATCTCAAATG-TGCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
196 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT-CTTTAAGGGGGTGTGAGTTCTCGAGGTTT
*
15823742 GATGTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
260 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * *
15823807 CCCCCTCGGCCGACCCGATCGCCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACGATGCTCCG
325 CCCCC-CGGCC-CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CG
* * * * **
15823872 GTGATGGTGCCACGACGAAGAAAAATGCAGCACCAACACATGCCCGAGCCAAGCATGTGCTACCG
387 GCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCG
* * ** * *
15823937 CAACCCTCGATTGGATCGGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAA
452 TAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* *** *
15824002 TCCGTATGCCAAAGTCAACCCACGAAGTGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
517 TCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
** * ** * * * * * * *
15824067 GTACAAGCTGGGGATCGCACGGGTCCCCTTCTACGTGCTGCCGATCCTGCTACCGTAACCCTCAA
582 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCAG
* * * * *
15824132 TC-CAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGAGGG
647 TCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGG
* * * * *
15824196 CGGGCGGGCACTAC-CCTGACCAGAGAGACGGGATGTGCAAGCAGTCGATCGATAGGGTGGCAGG
711 CGGGCGGGCACTACGCC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
15824260 TGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATG-A-TTTCA-C-GACAA--GAC-AA-CT
775 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCATTTTCATCTGACAATGGCCTAACCT
15824317 T-GT-TTT-T-TA-
840 TCGTATTTATATAC
* *
15824326 TTTTTCATGATTTTCAAAACTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
1 TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
* *
15824391 GGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCCTGCACAAAAAACATTCAGCTAA
66 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-ATTCAGCTAA
*
15824456 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAAT
130 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * * * *
15824521 GGCTACTGGCAGCTAACCTATAAAATCTCAAATGCTTTTTAAGGGTGTGTGAGTTCTAGAGGTTT
195 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
15824586 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGAGCGGACA
260 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* *** * * *
15824651 CCCCCCGGCCCCCTCGATTGTTAAAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTTCTG
325 CCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGC-TCGG
* * * * *
15824716 CGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGCCTGTGCTGTCAT
388 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGT
15824781 AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
453 AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * *
15824846 CCGTATGCCCAAGTCAACTCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGGGGGGCGGGATG
518 CCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
** * ** *
15824911 CGCAAGCCAAGGATCGGTCGGGTCCTCCTCTGCATGCTGTCGATCCTGCTGCTACAAGCCTCAGT
583 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCAGT
* * * *
15824976 CCGATCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAGCCGACGAAATGAGCGGGTG
648 CTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCG
* * * *
15825041 GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGTTTGATAGGGTGGTAGGTGG
713 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
15825106 GTTTAGGCACATCTTCATATTTCTGCATGCCAATG-ATTTTCA-C-GGCAA-GG-C-AA-CTT-G
778 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCATTTTCATCTGACAATGGCCTAACCTTCG
15825163 T-TTT-T-TA-
843 TATTTATATAC
*
15825170 TTTTTCATGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
1 TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
* * *
15825235 GTCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCCTGCACAAAAAACATTCAGCTAA
66 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-ATTCAGCTAA
*
15825300 AAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
130 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * * * *
15825365 TGCTACTGGCAGCTAACCTGTAAAATCTCAAATGCTTTTTAAGGGTGTGTGAGTTCTCCAGGTTT
195 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * *
15825430 GATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACGCATCGCACATCATGAGCGCACA
260 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
*** **
15825495 CCCCCCGGCCCCCTCGATCGTTAAAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTTCGG
325 CCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGC-TCGG
* * * * ** * *
15825560 CGATGGTGCCCCGACGAATAAAAATGCAGCACCAGCACATGCCCAAGAGCAGCCTGTGCTGTCAT
388 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGT
*
15825625 AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACT
453 AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * *
15825690 CCGTATGCCCAAGTCAACTCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGGGGGGCGGGATG
518 CCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * *
15825755 CGTAAGTCGAGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCTGCAAGCCTCAGT
583 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCAGT
* * * * *
15825820 CTGATCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCACCCTACGAAATGAGCGGACG
648 CTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCG
* * * * *
15825885 GGCGGGCACTACGTCGGCCAGAGAGACGGGATGTGCAAGCCATGGTTTGATAGGGTGGTAGGTGG
713 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
15825950 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
778 GTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C-TG---------ACAAT
*
15826015 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACGCATTTTC
830 GG--CC-TAA-CCTT--CGT--A-TTT-AT-------------A--TAC
* *
15826064 TATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGATTT
1 --TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTT
* * *
15826129 TTGGCCCCAAACTTGGTAGAGGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTAAGCTA
64 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
15826194 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAA
129 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
15826259 TGGCTACTAGCAGCAAGCCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
194 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * *
15826324 TGATAAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT-TGGCGCA
259 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT-GCGCA
* * **
15826388 CACCCCCCCGGCCCCTTCGATCGTCGGAACCCAAATGCCGCCGGTCAGGTTCTCCGGTGATGCTC
323 CA-CCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-
* * *
15826453 CGGCGATGGTG---C-AC-CAG-CAAA----G-A--AA-A-ATG--C-AGCACCAGCATGTACTG
385 CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGC-CCAGCATGTGCTG
* *
15826500 CCGCAACCCTCGGTCCGATCCGATC-----C------T--A----G-A--C-T----T-GGAATG
449 TCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * * * ** *
15826539 AACTCCGTATGCCTAAGTCAACCCATGAAACTAGCGTGCGGGCGTTGAACCGATCAGAGGGGCAG
514 AACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * * *
15826604 GATGCACAAGCCGGGGATCGGCCTGGTCCCTCTCTGCATGCTATCGATCCTGCTGCCGCAACCCT
579 GATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCT
* * * * * * *
15826669 CGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCGAACTGATGAAACGAGCA
644 CAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--TG-A
* * **
15826734 GGCGGGCGGGCGGGCGGGCACTATGCCGGTCAGAGAGACGGGATGCGCAAGCTATGGATCGATAG
706 -----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* *
15826799 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGACAATGCCATTTTTATGGCTTGTA
766 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C-TG--
15826864 AATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTC
825 -------ACAATGG--CCT-AA-CCTT--CGT--A-TTT-AT---------A-T-A----C
** * **
15826925 TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
1 --TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTT
* *
15826990 TCGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTA
64 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
15827055 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
129 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
15827120 TGGCTACTGGTAGCAAACATGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
194 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * *
15827185 TGATGAGGGATAGGGGGCCAATATAAGGACCAAGTATCAGCACCCATCGCACATCATGTGCGGAC
259 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* **
15827250 ACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTTGGTCAGGTTCT-CGACGATGCTCCG
324 ACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CG
* ** * * *
15827314 ACGATGGTGCTTCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTTG
387 GCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCG
* * ** *
15827379 CAATCCTCGGTCCGATCCGATCTTAGACTTTGAATGAACTCCGTATACTTAGACTGGGAATGAAC
452 TAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
15827444 TCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGC--GCGCTCAGTCGGCCAGAGGGGCGGGAT
517 TCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * *
15827507 GCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCAATCTTGCTACCGCAACCATC-G
582 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCAG
* ** *
15827571 ATCGGATCCAATCTTAGAATGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCTGG
647 -TCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A--T--
* * *
15827636 CGGGCAGGCGGGCGGGAGGGCACTATGCCTGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
704 ---G-A-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* *
15827701 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTG
764 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C-TG
*
15827766 TAAATTCAAACAATGGTCCTTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTGTA
825 ---------ACAATGG-CC-T-AA-CCTT--CGT--A-TTT-AT---------A-T-A------C
* ** * *
15827831 TTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTCTTTTGAAATTTTTTCGGAAGGAGTTT
1 TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATT-TTTTAAAATTTTTTTGGAAGGAGTTT
** * * *
15827896 CAG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCATAAAAAAATTTAGCTAA
65 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* * *
15827960 AAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCATACACTTTAAT
130 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * *
15828025 GGCTACTGGCAGCAAACCTGCAAAATCTCAAATTCTCTTTAACGGGGTGTGAGTTCTCGAGGTTT
195 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
15828090 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATCAGCACCCATCGCACATCATGTACGCACA
260 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * *** * *
15828155 -CCCCCAGCCCCCACGATCGTCGAAACCGCAATGCTTTCAGTCAGGTTCTCCGGCGATGCTCCGG
325 CCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGG
* * * *
15828219 CGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGC
388 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGT
* * *
15828284 AACCCTCGATCCGATCCTATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
453 AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * *
15828349 CCGTATGCCTCAGTCAACCCACGAAACGAGCGTCCGGCCGCTCAGCCGGCTAGAGGGGCGGGATG
518 CCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* ** * * * ** * * *
15828414 CGCAAGCTGGGGATCGACCGGGGCCTCCTCTACGCGCTGTCGGTCCTACTGCCGCAA-CCTCGGT
583 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCAGT
* ** ** * * * *
15828478 CTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGGGTAATCCAACTGATGAAACGAGCGGGCG
648 CTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGA-------
* * * *
15828543 GGCGGGCAGGCGGACAGGCGGGCACTACACCGGCCAAAGAGACGAGATGCGCAAGCCGTGGATAG
706 -GC--G--GGC-G---GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
** *
15828608 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCT
762 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C-
**
15828673 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCAAGACGACTCATTTTT
823 TG---------ACAATGG--CC-TAA-CCTT--CGT--A--TT--T---------A-T-A--TAC
** * * * * *
15828738 TATTCTTCATGATTTT-TGAATTTTTTGAGGTTCGGGATATTTTAAAATTTTTTCGAAAGGAGTT
1 T-TT-TTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTT
* * *
15828802 TTGGCCCCAAACATGGTAGACGTTATCCTTGTATTTTTGTTGGCATGCACAAAGAAATTCAGCTA
64 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
15828867 AAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAA
129 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
15828932 TGGCTACTGGCAGCAAACCTGTAAAATATCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTT
194 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
15828997 TGAGGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACATCATGTGCGTAC
259 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* *
15829062 ACCCCCC-GCCCCCGGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGT
324 ACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGG
* * * * * * * *
15829126 CGATGGTGCCCCAATGAACAAAAATGCAGCACCAGCACATG-TCGAATCCCAGCATGTGCTGCCG
388 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCG-AGCCCAGCATGTGCTGTCG
* ** *
15829190 TAACCCTCGGTCCGGTTGGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAAATGAAC
452 TAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * ** *
15829255 TCCGTATACCTAAGTCAACACACAAAATGAA-CGTGCGGGCGCTCAGCTAGCCAGAGGGGTGGGA
517 TCCGTATGCCTAAGTCAACCCACGAAA-CAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * ** ** ** *
15829319 TGCACAAGCCGGGGATTGGTCGGGTCCCCCTCTGTGTGCTACCGATCCTGCTGCAACAACCCTTA
581 TGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCA
* * * *
15829384 GTCTGGTCTGATCTTATACTGAGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGCGGG
646 GTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGG
* * * * *
15829449 CGGGCGGGCATGCGGGCCCTATGCCGGCCAGAGAGACGAGATGCGCAAGCCATGGATTGATAAGG
711 CGGGCGGGCA--------CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
* * *
15829514 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAA
768 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C-TG---A
*
15829579 TTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
826 --C--A-A-TGG--CC-TAA-CCTT--CGT--A-TTT-AT------A-TAC
** * * * *
15829630 TCGTTTTCTATTTTTTATCATTTTTGAAACTTTCTGCGGTTTGGGATGTTTTAAAATTTTTTGGG
1 T--TTTTC-ATGATTT-TCA------AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG
* * * *
15829695 AAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAAA
56 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
15829760 TTCAGCTAAAAACTCGATGCT-TACAAGATTTTGTGACCATTTGAAAAAAGTGTGCCCATTTTAG
121 TTCAGCTAAAAACTCGAAG-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
15829824 ACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTT
185 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
15829889 CTCAAGGTTTGATTAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCA
250 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * *
15829954 TGTGCGCACACCCCCCGCGGCCCCCCCGATCGTCGGAACCCTAATGCTGCCAGTCAGGTTCTCCG
315 TGTGCGCACA-CCCCC-CGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * *** * *
15830019 GCGATGCTCCGACGATGGTGCCCCAACGAAGAAAAATGCGGCACCAGCACATGCAAAATCCCACC
377 ACGATGCT-CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* * *
15830084 ATGTGCTGTCGTAACCCTCGGTCCGGTCGGATCTTAGACTGGGAATGAACTCCGTATGCTGAGAC
441 ATGTGCTGTCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * *
15830149 TGAGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCGGCCAG
506 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAG
* * ** ** * * *
15830214 AAGGGTGGGATGCGCAAGCCGACGATCGACCGGGTCCCCCTCTACATGCTGCCGATCCTCCTGCC
571 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCC
* ** ** * * *
15830279 GCAA-ACTTGGTCTGGGCTAATCTTAGACTGGGAATGAACACTGTATGCCTAAGCCAACCGACGA
636 GCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* ** * *
15830343 AACGAGCGACCGGGCGGGCACTACACCGGCCAGAGAGACAGG-TGCGCAAGCCGTGGATCGATAG
701 AATGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* *
15830407 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTTATGGCTTGTA
766 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C-TG--
*
15830472 AATTCATACGATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
825 -A--C--A--ATGG--CC-TAA-CCTT--CGT--A-TTT-AT------A-TAC
* * * *
15830525 TCGTTTTCTAT-TTTTCATCATTTTTGAAACTTTCTGCGGTTTGGGATTTTTTAAAATTTTTTGG
1 T--TTTTC-ATGATTT--TCA------AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTG
* * *
15830589 GAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
55 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
15830654 ATTCAGCTAAAAACTC-AATGTGTACAAGATTTTTTGTGACCATTTAAAAAAAGTGT-CCCATTT
120 ATTCAGCTAAAAACTCGAA-GTGTACAAGA--TTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
15830717 CAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
182 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
15830782 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
247 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
15830847 TCATGTGCGCACACCCCCTGGCCCCCCCGATCGTCGGAA-CCCAATGTCGCC--T-A-----T--
312 TCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * *
15830901 --C-A------G-G-T--T-CTCCGGCGAAGAATAATACGGCACCAACACATGCCCGAGCCCAGC
376 GACGATGCTCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* ** * **
15830952 ATGTGCTGCCACAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
441 ATGTGCTGTCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
*
15831017 TGGGAATGAACTTCGTATGCCTAAGTCAACCCAC--AA-AA------------T----------G
506 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * *
15831057 A---GC--G-TGCTC-AGCC-----TCGGCCGGGTCCCCCTCTGCGTGCTGTCCATCCTACTGCC
571 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCC
* * ** * * * *
15831110 GTAACCCTCGGTCTGATCCAATCTTAGA-CTGAGAAT--GAACTTTGTA-TGCC-TAAGCC-AA-
636 GCAA-CC-C--TCAG-TCTGATC-T-GATCTTAGACTGGGAA---TGAACT-CCGTATGCCTAAG
** * * * * *
15831168 CTGA-CGA--AACGATCGGGTGAGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGTAAG
690 CCAACCGACGAA--AT-GAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* **
15831230 CTGTGGAAT-GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
752 CCGTGG-ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CA
*
15831294 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
815 TTTTCAT--C-TG---------ACAATGG--CC-TAA-CCTT--CGT--A-TTT-AT------A-
*
15831359 GAC
851 TAC
* ** * ** *
15831362 TTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCGGTATTTTTTAAAATTTTTCAGC
1 -T-TTTTC-A----T---GATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG
** * *
15831427 AAGGAGTTTTGGCCCCAAACTTTTTAGACATAATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
56 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * *
15831492 TTCAGCTAAAAACTTGAACTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGA
121 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
** *
15831557 CACTTTAATGGCTACTTCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTC
186 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
15831622 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
251 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
*
15831687 GTGCGCACACCCCCCGGCCCCCACGATCGTCGGAA-CCCAATGCCGCCTGTCAGG---T------
316 GTGCGCACACCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
* * * *
15831742 -T-CTC--C-A----G---CG-C--AGAAAAATACGGCAACAACACATACCCGAGCCTAGCATGT
380 ATGCTCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGT
* * * * *
15831792 GCTG-C-TGAA-------TCC---CCG-TC-TGGTCT--GAAT-TA-T-AGTATGCTTAGACTGA
445 GCTGTCGT-AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
15831838 GAAT-AACTCCGTATGCCTAAGTCAACCCAC-AAATAGAGCGTG-TGGTGCTCAGCC-GCCA-A-
509 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACA-AGCGTGCGGGCGCTCAGCCGGCCAGAG
* *
15831897 GGG-GGGA-GCACAAGCCGGGGATC-GTC--GT-CCCCTCT--ATG-TGCTACGAT-CTGC-GTC
573 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTG-T-CGATCCTGCTGCC
* * * * * *
15831951 GC-ATCCTCGGTCAGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAGGCCAACCGATGA
636 GCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-
* ** * * *
15832015 AACGAGTGGGCAGGCAGACGGGCGGGCACTACGGTGGCTAAAGAGACGGGATGCCCAAGCCGTGG
700 AA--A-TGAGC-GG--G-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * * * * * **
15832080 ATCGATTGGGTGGTAGGCGGGCTTAGGGACATCTTAATATTTTTGTGTGCCAATGCCATTTTTAT
758 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CA----T-T
15832145 GGCTTCTAAATTCAT-ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCA
817 ---TTC---A-TC-TGACAATGG--CC-TAA-CCTT--CGT--A-TTT-AT---------A-T-A
15832209 TTTTC
853 ----C
* * ** * *
15832214 TATTTTTCACGATTTTCAAAACTTTTTGTGGTTCAAGATTTTTTAAAATTTTTTCGAAAGGAGTT
1 --TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTT
*
15832279 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTTGGCATGCACAAAAAAATTCAGC
64 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--TTTTTGTTGGCATGCACAAAAAAATTCAGC
* ** *
15832344 TAAAAACTCGAAGTGTACATGATTTTGTGACCATTTGAAAAAAGTGTCTGCATTTTAGACACTTT
127 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
15832409 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
192 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * * *
15832474 TTTGATGAGGGATAGGGGCCCAATATAAGGGCCAATTACCAGCACCCATCACATATCATGTGCGC
257 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* *
15832539 ACACCCCTCGACCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--CGA---T--
322 ACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCG
* * * * * * * *
15832596 --GATTGTGCCCCGATGAAG-AAAATACGGCACCAACACAAGCTCGGGCCCAGCATGTGCTGCCA
387 GCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCG
* * * * *
15832658 CAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTTCGTATGCTTAGACTGGGAATGAAC
452 TAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * *
15832723 TCCGTATGCTTAAGACTGAGAAGTGAACTCGTATGCCTAGTCAAACCCACGAACGAGCGGGTGGG
517 TCCGTATGC------CT---AAGTCAAC-C-CA---C--G--AAA--CA--AGCGTGC-GG-GCG
** * * * *
15832788 TCTCAGCCAATCCAGAAGGGGCAGGATGCGCAA-CCAGGGATTGGTC-AGT-CCCCTCTGCATGC
558 -CTCAGCC-GGCCAG-AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGC
* * * *** *
15832850 TGTCCATCCTGCTCCCGC-ACCC-C-GTCCGATCTGATC-TAGAAAAGAAATGAACTCCGTATGC
620 TGTCGATCCTGCTGCCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * * *
15832911 CTAAGCCAACTGACAAAGACGATCGGGCGAGGACGGGCTACTACGTCGGCGCCAGAGAGAC-AGA
685 CTAAGCCAACCGACGAA-ATGAGCGGGCG-GG-CGGGC-ACTACG-CCG-GCCAGAGAGACGGGA
* ** * *
15832975 TGCGAAAGCTATGGA-CAGATA----GGT-GGT--GTTTAGG--CATCTTCATATTT-T-TATGT
744 TGCGCAAGCCGTGGATC-GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* * ** ** *
15833028 TAAT---TTTAT-GTCT-A-AATTCATACACTAACCTTC--AGGT-GA-A-
808 CAATGCATTT-TCATCTGACAA-T--GGC-CTAACCTTCGTATTTATATAC
* * *** ** * *
15833068 -GTTTC-TG----GCAAGAGACTCGTTTAT-TTTTTCACGA-TTTTAAAAACTTTTTGCGGTTTT
1 TTTTTCATGATTTTCAA-A-ACT--TTT-TGCGGTTCGGGATTTTTTAAAA--TTTT----TTTG
* * * *
15833125 AAAGGA--TTTAGCCTCGAACTTGGTAGACGTGATCCTTGTA-TTTTG-TGGCATGCAC-AAAAA
55 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* **
15833185 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTTGG
120 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
15833249 ACACTTTAAATGGCT-CTGGCAGC-AACCTGTAAAATC-CAAATGCTCTTTAAGGGGGTGTGAGT
185 ACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
15833311 TCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGCACCCATCACACATC
249 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
** ** * * * *
15833376 ATGTGCGCACACCCCCCCGGCGCCCTAGATCACCGAAACCCTAATGCCGTCGGTCATGTTCTCCG
314 ATGTGCGCACA-CCCCCCGGC-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
*** * * * *
15833441 ACGATGCTCCGGCGACAATGCCCCGACAAAGAAAAATGTGGCACCAACACATGTCCAAGCCCAGC
377 ACGATGCT-CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* * *
15833506 ATGTGCTGCCGTAACCCT-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
441 ATGTGCTGTCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * *
15833570 TGAGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAA-CGTGCGGGTGCTCAACCGGCCA
506 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC-AAGCGTGCGGGCGCTCAGCCGGCCA
* * * * * *
15833634 GAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGCCCCCCTCTGCATGCTGCCAATCCTGCTGA
570 GAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGC
* * * *
15833699 CACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACG
635 CGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
15833764 AAATGAGCGGGCGGGCGGGTACTACACCAGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATA
700 AAATGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* *
15833829 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGT
765 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C---T
*
15833894 AAGTTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
824 --G-----ACAATGG--CC-TAA-CCTT--CGT--A-TTT-AT------A-TAC
* * *
15833948 TTGTTTTTTATTTTTCATAATTTTCAAAACTTTTTGGGGTTCAGGATTTTTTAAAATTTTTTTGG
1 ----------TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG
* * *
15834013 AAGGAGTTTTGGCCCCAAAC-TGGAAAGACAG-GATCCTTGTATTTTTTTTGGCATGCAAAAAAA
56 AAGGAGTTTTGGCCCCAAACTTGG-TAGAC-GTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
15834076 AATTCAGCTAAAAAATCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGAGTCCCCATTTCA
119 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
15834141 GACATTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
184 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
15834206 TCTTGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCACCAACCATCGCACATC
249 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * * *
15834271 ATTTGCGCACACCCCCTCGACCTCCCCAATTGTCGAAACCCCAATACCACCGGTCAGGTTCTCCG
314 ATGTGCGCACACCCCC-CGGCC-CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * *
15834336 ACGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCAAGCCTAGC
377 ACGATGCT-CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* * *
15834401 ATGTGCTGTTGTAACCTTCGGTCC-AGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
441 ATGTGCTGTCGTAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * *
15834465 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGGGTGCGGGGGCTCAACCGGCCA
505 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCA
** ** * * * * *
15834530 GAGGGAAGGGATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCCGCGT-CTTGCCGATCTTGCTA
570 GAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGC-TGTCGATCCTGCTG
* * * * * * *
15834593 CCGCAATCCTCAGTTTGGTCCGATCTTAGACT-GCAATG--CTCTGCATG-CT-AG-CAACCGAC
634 CCGCAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-
* * *
15834652 CGAAACGA-C-GGTGGGC-GGCAC-ACGCCGGCCAGAGAGAACGGGATTGCGCAAGCCGTGGATT
698 CGAAATGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAG-ACGGGA-TGCGCAAGCCGTGGATC
* * * * *
15834713 GATTGGGTGGTAGGTGGTTTTCGGTACATCTTCATATTTCT--ATGGCCAATGCCATTTTTATGG
761 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT-GCCAATG-CATTTTCAT--
* *
15834776 GACTGTAAATTCATACAATGGCCCTAAAGCCTTCACGTAGTTCAGGCAATACGACTTC
822 --CTG---------ACAATGG-CCT-AA-CCTT--CGTA-TT-------TA-TA-TAC
* *
15834834 GTTTATATTTCACGATTTT-GAAA-TTTTAT--GGTTCGGGA-TTTTT-AAATTTTTTT-GAACG
1 ---T-T-TTTCATGATTTTCAAAACTTTT-TGCGGTTCGGGATTTTTTAAAATTTTTTTGGAA-G
15834892 GA---TTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTCTG-TGGCATGCACAAAAAAATT
59 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT-TGTTGGCATGCACAAAAAAATT
** *
15834952 CAG-T-AAAACTC-ATAGT-TACAAGAATTTTGTG-CCATTTTGATAACCA-TGTCCCC-TATCC
123 CAGCTAAAAACTCGA-AGTGTACAAG-ATTTTGTGACCA-TTTGA-AAAAAGTGTCCCCAT-TTC
* * *
15835010 GGGCACTTTAATGGCTACT-GC-GCAAAACCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGA
183 AGACACTTTAATGGCTACTGGCAGC-AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
15835073 GTTCTTGAGGTTTGATTAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCATA
247 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
15835138 TCATGTGAGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTC
312 TCATGTGCGCACA-CCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * ** * *
15835203 CGATGATGCTCTGGCGACGGTGCCCCGGTGAAGAAAAATGCAGAACCAACACATGCCCGAGCCCA
375 CGACGATGCTC-GGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCA
* ** * * * *
15835268 GGATGTAAT-ACTGCAACCCTCGGTCC-AGTTCGATCTTAGACTGGGAATGAACTCTGTATGCTT
439 GCATGTGCTGTC-GTAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * * * * *
15835331 AGACGGGGAATGAACTCCATTTGCCTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAGTCGG
502 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGG
* * ** * * ** * *
15835396 CTAGAGGGGCGGGATGCGTAAGCCGGGGATCGACCAGGTCCCCCTCTGCGTGCTACCAATCTTGC
567 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGC
* * * * *
15835461 TGCTGTAACCCTCAATC-CAGTCCGATCTTAGACTGGGAATG---TCCGTATGCCTAAGCCAACC
632 TGCCGCAACCCTCAGTCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * **
15835522 GACCAAACGAGCGGGCGGGCGGGCGGGCACTGCGTCGGCCAGAGGGACGGGATGCGCAAGTTGTG
696 GACGAAATGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * * * *
15835587 GATCAATAGGGTTGCT-GGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTT
757 GATCGATAGGG-TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTC
15835651 ATGGCTTGTAAATTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTC
820 AT--C-TG--------ACAATGG--CC-TAA-CCTT--CGT--A-TTT-AT------AT-A--C
* * * * * * *
15835715 ATTTTTTATTTTTCACGATTTTCGAAAC-CTTTGCGGTTTGAGATTTTTT-AAATTTTTTCGAAA
1 --------TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAA
* * *
15835778 GAAGTTTT-GCCCCAAACTTGGTAGACCTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATT
58 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * *
15835842 CAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAATGTGTTCCCATTTCAGACA
123 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
15835907 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
188 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * *
15835972 GAGGTTTGATGAGGGATATGGGACCAATATAAGGGCCAAGTCCCAGCACCCATCACACATCATGT
253 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
** * *
15836037 GCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGTCGCCGATCAGGTTCTCCGACGA
318 GCGCACA-CCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
** * *
15836102 TGCTCGGACGATGGTGCCCCGGTGAAGAAAAATGCTGCACCAACACATGCCCGAGCCCAGCATAT
381 TGCTCGG-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGT
* * * * *
15836167 GATGCCGCAACCCTCGGTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGG
445 GCTGTCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
**
15836232 AATGAACTCTATATGCCTAAGT------------CAA---------CG---A-----CCAGAGGG
510 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * * * * *
15836268 GCAGAATGCGTAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTATCGATCCTGCTGCCCCAA
575 GCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAA
* * * *
15836333 CCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACTGACAAAATG
640 CCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATG
* * *
15836398 AGCGGGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAG
705 A----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* ** *
15836463 GATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTA
766 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG-CATTTTCAT--C-TG--
* *
15836528 AATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTGTCATGGCAAGATGACTCATTTTTTA
825 -------ACAATGG--CC-TAA-CCTT--C--GTA-T-T--T------AT-A-T-A------C
* * * * *
15836591 TTTTTCATAATTTTCAAAACTTTTTACGGTTTGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTT
1 TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
** * *
15836656 GGCCCCAAACTTGGTAGACACGA-CCTTGTATTTTTTTTGGCATGCACAAAAAACTTCAGCTAAA
66 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
15836720 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
131 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * * *
15836785 TCAACTGGCAGCAAACCTGTAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCGAGCTTTG
196 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* *
15836850 ATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACAC
261 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
** * * * *
15836915 CCCCCCAACCCCCCGATCGTTGGAACCCTAATGCTGCCAGTCAGG-T-T----C--T--TC-G-G
325 CCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGCG
* * * *
15836968 -TGATGCTCCGGCGAAGAAAAATGCGGCACCAACACATGCTCGAGCCCAGCATGTGCTGT-GTAA
390 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGTAA
* *
15837031 CCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
455 CCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
15837076 CTAAGCCAAC
Statistics
Matches: 10776, Mismatches: 1294, Indels: 1349
0.80 0.10 0.10
Matches are distributed among these distances:
817 25 0.00
818 20 0.00
819 2 0.00
820 2 0.00
821 4 0.00
823 4 0.00
824 2 0.00
825 1 0.00
828 3 0.00
831 53 0.00
832 25 0.00
833 33 0.00
834 48 0.00
835 52 0.00
836 276 0.03
837 278 0.03
838 60 0.01
839 12 0.00
840 20 0.00
841 11 0.00
842 26 0.00
843 530 0.05
844 1216 0.11
845 116 0.01
846 271 0.03
847 62 0.01
848 77 0.01
849 28 0.00
850 20 0.00
851 12 0.00
852 9 0.00
853 199 0.02
854 50 0.00
855 61 0.01
856 4 0.00
857 5 0.00
858 76 0.01
859 100 0.01
860 50 0.00
861 469 0.04
862 10 0.00
863 3 0.00
864 91 0.01
865 5 0.00
866 8 0.00
867 142 0.01
868 180 0.02
869 403 0.04
870 354 0.03
871 41 0.00
872 64 0.01
873 18 0.00
874 10 0.00
875 7 0.00
876 52 0.00
877 43 0.00
878 92 0.01
879 73 0.01
880 29 0.00
881 25 0.00
882 4 0.00
883 1 0.00
884 16 0.00
885 13 0.00
886 31 0.00
887 75 0.01
888 77 0.01
889 41 0.00
890 73 0.01
891 26 0.00
892 144 0.01
893 350 0.03
894 63 0.01
895 723 0.07
896 477 0.04
897 29 0.00
898 8 0.00
899 6 0.00
900 260 0.02
901 281 0.03
902 61 0.01
903 42 0.00
904 693 0.06
905 346 0.03
906 83 0.01
907 276 0.03
908 328 0.03
909 173 0.02
910 27 0.00
911 10 0.00
912 41 0.00
913 16 0.00
914 10 0.00
915 8 0.00
920 1 0.00
921 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (853 bp):
TTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
CCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGCGA
TGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGTAAC
CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
TATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
AAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCAGTCTG
ATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGC
GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTGCATGCCAATGCATTTTCATCTGACAATGGCCTAACCTTCGTAT
TTATATAC
Found at i:15825674 original size:26 final size:26
Alignment explanation
Indices: 15825645--15825697 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15825635 CCGATCCGAT
15825645 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15825671 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15825697 C
1 C
15825698 CCAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15827429 original size:26 final size:26
Alignment explanation
Indices: 15827400--15827450 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15827390 CCGATCCGAT
**
15827400 CTTAGACTTTGAATGAACTCCGTATA
1 CTTAGACTGGGAATGAACTCCGTATA
15827426 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
15827451 GCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.20, G:0.20, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATA
Found at i:15828333 original size:26 final size:26
Alignment explanation
Indices: 15828304--15828356 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15828294 CCGATCCTAT
*
15828304 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15828330 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15828356 C
1 C
15828357 CTCAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15829240 original size:26 final size:26
Alignment explanation
Indices: 15829211--15829261 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15829201 CCGGTTGGAT
*
15829211 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
15829237 CTTAGACTGGAAATGAACTCCGTAT
1 CTTAGACTGGAAATGAACTCCGTAT
15829262 ACCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.20, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:15830148 original size:26 final size:26
Alignment explanation
Indices: 15830119--15830168 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
15830109 GTCGGATCTT
*
15830119 AGACTGGGAATGAACTCCGTATGCTG
1 AGACTGAGAATGAACTCCGTATGCTG
*
15830145 AGACTGAGAATGAACTCTGTATGC
1 AGACTGAGAATGAACTCCGTATGC
15830169 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.18, G:0.28, T:0.24
Consensus pattern (26 bp):
AGACTGAGAATGAACTCCGTATGCTG
Found at i:15830620 original size:895 final size:896
Alignment explanation
Indices: 15826526--15837075 Score: 11427
Period size: 904 Copynumber: 12.0 Consensus size: 896
15826516 GATCCGATCC
* * * * * * *
15826526 TAGACTTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACTAGCGTGCGGGCGTTGAACCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
** * * * * * **
15826591 ATCAGAGGGGCAGGATGCACAAGCCGGGGATCGGCCTGGTCCCTCTCTGCATGCTATCGATCCTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * *
15826656 CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCGAACT
131 CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
15826721 GATGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTATGCCGGTCAGAGAGACGGGATGCGCAAGC
196 GACGAAAC--G-A-GCGGAC---CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
** * *
15826786 TATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGACAATGCCATT
254 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATT
*
15826851 TTTATGGCTTGTAAATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
319 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
15826916 CTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
384 CTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG
* *
15826981 GAAGGAGTTTCGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAA
449 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
15827046 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAA
514 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
15827111 ACACTTTAATGGCTACTGGTAGCAAACATGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
579 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
15827176 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTATCAGCACCCATCGCACATCA
644 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * **
15827241 TGTGCGGACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTTGGTCAGGTTCT-CGAC
709 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* ** * *
15827305 GATGCTCCGACGATGGTGCTTCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCAT
774 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * * ** *
15827370 GTGCTGTTGCAATCCTCGGTCCGATCCGATCTTAGACTTTGAATGAACTCCGTATACT
839 GTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* *
15827428 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGC--GCGCTCAGTCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
* * * * *
15827491 GCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCAATCTTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * * ** *
15827556 CTACCGCAACCATCGATC-GGATCCAATCTTAGAATGGGAATGAACTCCGTATGCCTAAGCCAAC
131 CTGCCGCAACCCTCGGTCTGG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * *
15827620 CGACGAAACGAGCTGGCGGGCAGGCGGGCGGGAGGGCACTATGCCTGCCAGAGAGACGGGATGCG
195 CGACGAAACGA----GC-GG-A--C---CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* *
15827685 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATG
249 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATG
*
15827750 CCATTTTTATGGCTTGTAAATTCAAACAATGGT-CCTTCAAGCCTTCACGTGAAGTTTCATGGCA
314 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT-AAGCCTTCACGTGAAGTTTCATGGCA
* *
15827814 AGACGACTCATTTTGTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTCTTTTGAAAT
378 AGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATT-TTTTAAAAT
** *
15827879 TTTTTCGGAAGGAGTTTCAG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCA
442 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * * *
15827943 TAAAAAAATTTAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCC
507 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * * *
15828008 ATTTCATACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAATTCTCTTTAACGGGGT
572 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
15828073 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATCAGCACCCATCG
637 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *** *
15828138 CACATCATGTACGCACA-CCCCCAGCCCCCACGATCGTCGAAACCGCAATGCTTTCAGTCAGGTT
702 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
* * * *
15828202 CTCCGGCGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGC
767 CTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGC
* * * *
15828267 CCAGCATGTGCTGTCGCAACCCTCGATCCGATCCTATCTTAGATTGGGAATGAACTCCGTATGCT
832 CCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * *
15828332 TAGACTGGGAATGAACTCCGTATGCCTCAGTCAACCCACGAAACGAGCGTCCGGCCGCTCAGCCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
* * * * * * * * * *
15828397 GCTAGAGGGGCGGGATGCGCAAGCTGGGGATCGACCGGGGCCTCCTCTACGCGCTGTCGGTCCTA
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
** ** * *
15828462 CTGCCGCAA-CCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGGGTAATCCAACT
131 CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * *
15828526 GATGAAACGAGCGGGCGGGCGGGCAGGCGGACAGGCGGGCACTACACCGGCCAAAGAGACGAGAT
196 GACGAAACGA--------GC-GG-A--C---CGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
*
15828591 GCGCAAGCCGTGGATAGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-TGTGCC
246 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCT-TGCC
*
15828655 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTG
310 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * * * * *
15828720 GCAAGACGACTCATTTTTTATTCTTCATGATTTTTG-AATTTTTTGAGGTTCGGGATATTTTAAA
375 GCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAA
* * *
15828784 ATTTTTTCGAAAGGAGTTTTGGCCCCAAACATGGTAGACGTTATCCTTGTATTTTTGTTGGCATG
440 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
15828849 CACAAAGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCC
505 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
15828914 TCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATATCAAATGCTCTTTAAGAGG
570 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
15828979 GTGTGAGTTCTCGAGGTTTGAGGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCTAT
635 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* *
15829044 CGCACATCATGTGCGTACACCCCCC-G-CCCCCGGATCGTCGGAACCCCAATGCCGCCGGTCAGG
700 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * * * * * *
15829107 TTCTCCGACGATGCTCCGTCGATGGTGCCCCAATGAACAAAAATGCAGCACCAGCACATG-TCGA
765 TTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCG-
* * * **
15829171 ATCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTGGATCTTAGACTGGGAATGAACTCCGTAT
829 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
15829236 GCT
894 GCT
* * * * * *
15829239 TAGACTGGAAATGAACTCCGTATACCTAAGTCAACACACAAAATGA-ACGTGCGGGCGCTCAGCT
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGA-GTGCGGGCGCTCAGCC
* * * * * * *
15829303 AGCCAGAGGGGTGGGATGCACAAGCCGGGGATTGGTCGGGTCCCCCTCTGTGTGCTACCGATCCT
65 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCT
** ** * *
15829368 GCTGCAACAACCCTTAGTCTGGTCTGATCTTATACTGAGAATGAACTCCGTATGCCTAAGCCAAC
130 GCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
15829433 CGATGAAATGAGCGGGCGGGCGGGCATGCGGGCCCTATGCCGGCCAGAGAGACGAGATGCGCAAG
195 CGACGAAACGAGCGGAC---C-GG---GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * * *
15829498 CCATGGATTGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCAT
253 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCAT
*
15829563 TTTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
318 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * * *
15829628 ACTCGTTTTCTATTTTTTATC-ATTTTTGAAACTTTCTGCGGTTTGGGATGTTTTAAAATTTTTT
383 ACTCATTTTCTATTTTTCA-CGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * * *
15829692 GGGAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCAAAAAA
447 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
15829757 AAATTCAGCTAAAAACTCGATGCT-TACAAGATTTTGTGACCATTTGAAAAAAGTGTGCCCATTT
512 AAATTCAGCTAAAAACTCGAAG-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
15829821 TAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGA
576 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
15829886 GTTCTCAAGGTTTGATTAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACA
641 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
15829951 TCATGTGCGCACACCCCCCGCGGCCCCCCCGATCGTCGGAACCCTAATGCTGCCAGTCAGGTTCT
706 TCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * * * *** *
15830016 CCGGCGATGCTCCGACGATGGTGCCCCAACGAAGAAAAATGCGGCACCAGCACATGCAAAATCCC
769 CCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
* * *
15830081 ACCATGTGCTGTCGTAACCCTCGGTCCGGTCGGATCTTAGACTGGGAATGAACTCCGTATGCT
834 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * *
15830144 GAGACTGAGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
* * ** * * * *
15830209 GCCAGAAGGGTGGGATGCGCAAGCCGACGATCGACCGGGTCCCCCTCTACATGCTGCCGATCCTC
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * * * * *
15830274 CTGCCGCAA-ACTTGGTCTGGGCTAATCTTAGACTGGGAATGAACACTGTATGCCTAAGCCAACC
131 CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* *
15830338 GACGAAACGAGC-GACCGGGCGGGCACTACACCGGCCAGAGAGACAGG-TGCGCAAGCCGTGGAT
196 GACGAAACGAGCGGACCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
15830401 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTTATGG
261 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTTATGG
* *
15830466 CTTGTAAATTCATACGATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
326 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTT
* * *
15830531 TCTATTTTTCATC-ATTTTTGAAACTTTCTGCGGTTTGGGATTTTTTAAAATTTTTTGGGAAGGA
391 TCTATTTTTCA-CGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* * *
15830595 TTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
455 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
*
15830660 CTAAAAACTC-AATGTGTACAAGATTTTTTGTGACCATTTAAAAAAAGTGT-CCCATTTCAGACA
520 CTAAAAACTCGAA-GTGTACAAGA--TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
15830723 CTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
582 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
15830788 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
647 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* *
15830853 GCGCACACCCCCTGGCCCCCCCGATCGTCGGAA-CCCAATGTCGCC--T-A-----T----C-A-
712 GCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * * *
15830903 ------G-G-T--T-CTCCGGCGAAGAATAATACGGCACCAACACATGCCCGAGCCCAGCATGTG
777 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
* * **
15830957 CTGCCACAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCT
842 CTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
*
15831012 TAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCAC--AA--A-A----------T------
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
*
15831056 ----GA---GC--G-TGCTC-AGCC-----TCGGCCGGGTCCCCCTCTGCGTGCTGTCC-ATCCT
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTG-CCGATCCT
* * * ** * **
15831104 ACTGCCGTAACCCTCGGTCTGATCCAATCTTAGACTGAGAATGAACTTTGTATGCCTAAGCCAAC
130 GCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
15831169 TGACGAAACGATCGGGTGAGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGTAAGCTGT
195 CGACGAAACGA--GCG-GACCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
15831234 GGAAT-GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-TGTGCCAATGCCATTT
257 GG-ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCT-TGCCAATGCCATTT
15831297 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
320 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
** * *
15831362 TTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCGGTATTTTTTAAAA-TTTTTCAG
385 TCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-G
* ** * *
15831426 CAAGGAGTTTTGGCCCCAAACTTTTTAGACATAATCCTTGTATTTTTGTTGGCATGCACAAAAAA
449 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * *
15831491 ATTCAGCTAAAAACTTGAACTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAG
514 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
** *
15831556 ACACTTTAATGGCTACTTCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTT
579 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
15831621 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
644 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
15831686 TGTGCGCACACCCCCCGGCCCCCACGATCGTCGGAA-CCCAATGCCGCCTGTCAGG---T-----
709 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * * *
15831742 --T-CT-C--C-A----G---CG-C--AGAAAAATACGGCAACAACACATACCCGAGCCTAGCAT
774 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * * *
15831790 GTGCTG-CTG-AA-------TCC---CCG-TC-TGGTCT--GAAT-TA-T-AGTATGCT
839 GTGCTGTC-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * *
15831830 TAGACTGAGAAT-AACTCCGTATGCCTAAGTCAACCCAC-AAATAGAGCGTG-TGGTGCTCAGCC
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA-CGAGAGTGCGGGCGCTCAGCC
* * ** *
15831892 -GCCA-A-GGG-GGGA-GCACAAGCCGGGGATC-GTC--GT-CCCCTCTATGTGCT-ACGAT-CT
65 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCT
* * * * * *
15831946 GC-GTCGC-ATCCTCGGTCAGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAGGCCAAC
130 GCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * ** * * *
15832009 CGATGAAACGAGTGGGCAGGCAGACGGGCGGGCACTACGGTGGCTAAAGAGACGGGATGCCCAAG
195 CGACGAAACGA----GC-GG-A-CCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * * * *
15832074 CCGTGGATCGATTGGGTGGTAGGCGGGCTTAGGGACATCTTAATATTTTTG-TGTGCCAATGCCA
253 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCT-TGCCAATGCCA
*
15832138 TTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
317 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** * **
15832203 AACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTCAAGATTTTTTAAAATTTTTT
382 GACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* *
15832268 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTTGGCATGCACAA
447 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--TTTTTGTTGGCATGCACAA
* **
15832333 AAAAATTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACCATTTGAAAAAAGTGTCTGCATT
510 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
15832398 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
575 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
15832463 AGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAATTACCAGCACCCATCACAT
640 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
15832528 ATCATGTGCGCACACCCCTC-GACCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT-
705 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * *
15832591 C--CGA---T-----GATTGTGCCCCGATGAAG-AAAATACGGCACCAACACAAGCTCGGGCCCA
770 CGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCA
* * * * *
15832645 GCATGTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTTCGTATGCT
835 GCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * *
15832707 TAGACTGGGAATGAACTCCGTATGCTTAAGACTGAGAAGTGAACTCGTATGCCTAGTCAAACCCA
1 TAGACTGGGAATGAACTCCGTATGC------CT---AAGTCAAC-C-CA---C--G--AAA-CGA
* * ** * * * * *
15832772 CGAACGAGCGGGTGGGTCTCAGCCAATCCAGAAGGGGCAGGATGCGCAA-CCAGGGATTGGTC-A
47 -G-A-GTGC-GG-GCG-CTCAGCC-GGCCAG-AGGGGCGGGATGCGCAAGCCGGGGATCGGCCGG
* * * * ***
15832835 GT-CCCCTCTGCATGCTGTCC-ATCCTGCTCCCGC-ACCC-C-GTCCGATCTGATC-TAGAAAAG
104 GTCCCCCTCTGCGTGCTG-CCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGG
* * * * *
15832894 AAATGAACTCCGTATGCCTAAGCCAACTGACAAAGACGATCGG-GCGAGGACGGGCTACTACGTC
168 GAATGAACTCCGTATGCCTAAGCCAACCGACGAA-ACGAGCGGACCG-GG-CGGGC-ACTACG-C
* * * **
15832958 GGCGCCAGAGAGAC-AGATGCGAAAGCTATGGA-CAGATA----GGT-GGT--GTTTAGG--CAT
228 CG-GCCAGAGAGACGGGATGCGCAAGCCGTGGATC-GATAGGGTGGTAGGTGGGTTTAGGCACAT
** * *
15833012 CTTCATA-TT-T--TT----ATGTTAATTTTAT-G--TCTAAATTCATAC-A------C-TAA-C
291 CTTCATATTTCTGCTTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * **
15833057 CTTCAGGTGAAGTTTC-TGGCAAGA-GACTC-GTTTAT-TTTTTCACGATTTTAAAAACTTTTT-
356 CTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTG
* * *
15833117 --G--C-GG---TTTT---A---------AAGGA--TTTAGCCTCGAACTTGGTAGACGTGATCC
421 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
*
15833160 TTGTA-TTTTG-TGGCATGCAC-AAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGA
486 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
**
15833222 CCATTTGAAAAAAGTGT-CCCATTTTGGACACTTTAAATGGCT-CTGGCAGC-AACCTGTAAAAT
551 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAAT
*
15833284 C-CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAG
615 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * * ** ** *
15833348 GGCCAAGTACCTGCACCCATCACACATCATGTGCGCACACCCCCCCGGCGCCCTAGATCACCGAA
680 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGA
* * * *** *
15833413 ACCCTAATGCCGTCGGTCATGTTCTCCGACGATGCTCCGGCGACAATGCCCCGACAAAGAAAAAT
744 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAAT
* * * * * *
15833478 GTGGCACCAACACATGTCCAAGCCCAGCATGTGCTGCCGTAACCCT-GGTCTGGTCCGATCTTAG
809 GCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAG
15833542 ACTGGGAATGAACTCCGTATGCT
874 ACTGGGAATGAACTCCGTATGCT
* * * *
15833565 TAGACTGAGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGA-ACGTGCGGGTGCTCAACC
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGA-GTGCGGGCGCTCAGCC
* * * *
15833629 GGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGCCCCCCTCTGCATGCTGCCAATCCT
65 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCT
* * * * *
15833694 GCTGACACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAAC
130 GCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
15833759 CGACGAAATGAGCGG-GCGGGCGGGTACTACACCAGCCAGAGAGACGGGATGCACAAGCCGTGGA
195 CGACGAAACGAGCGGACCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
15833823 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATG
260 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTTATG
* **
15833888 GCTTGTAAGTTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTT
325 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATT
* ** ** * * *
15833953 TTTTATTTTTCATAATTTTCAAAACTTTTTGGGGTTCAGGATTTTTTAAAATTTTTTTGGAAGGA
390 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* * *
15834018 GTTTTGGCCCCAAAC-TGGAAAGACAG-GATCCTTGTATTTTTTTTGGCATGCAAAAAAAAATTC
455 GTTTTGGCCCCAAACTTGG-TAGAC-GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * * *
15834081 AGCTAAAAAATCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGAGTCCCCATTTCAGACAT
518 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
15834146 TTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTG
583 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * * *
15834211 AGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCACCAACCATCGCACATCATTTG
648 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * * * *
15834276 CGCACACCCCCTCGACCTCCCCAATTGTCGAAACCCCAATACCACCGGTCAGGTTCTCCGACGAT
713 CGCACACCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * * *
15834341 GCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCAAGCCTAGCATGTG
777 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
* * * * *
15834406 CTGTTGTAACCTTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
842 CTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * *
15834461 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGGGTGCGGGGGCTCAACCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
** * * *
15834526 GCCAGAGGGAAGGGATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCCGCGT-CTTGCCGATCTT
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGC-TGCCGATCCT
* * * * * * * *
15834589 GCTACCGCAATCCTCAGTTTGGTCCGATCTTAGACT-GCAATG--CTCTGCATG-CT-AG-CAAC
130 GCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
*
15834648 CGACCGAAACGA-CGG--TGGGC-GGCAC-ACGCCGGCCAGAGAGAACGGGATTGCGCAAGCCGT
195 CGA-CGAAACGAGCGGACCGGGCGGGCACTACGCCGGCCAGAGAG-ACGGGA-TGCGCAAGCCGT
* * * * * * *
15834708 GGATTGATTGGGTGGTAGGTGGTTTTCGGTACATCTTCATATTTCT-ATGGCCAATGCCATTTTT
257 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTT
* *
15834772 ATGGGAC-TGTAAATTCATACAATGG-CCCTAAAGCCTTCACGT--AG-TTCA-GGCAATACGAC
322 AT-GG-CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* *
15834831 T--TCGTT-TATATTTCACGA-TTTTGAAA-TTTTAT--GGTTCGGGA-TTTTT-AAATTTTTT-
385 TCAT-TTTCTATTTTTCACGATTTTTGAAACTTTT-TGCGGTTCGGGATTTTTTAAAATTTTTTC
*
15834886 TGAACGGA---TTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTCTG-TGGCATGCACAAA
448 GGAA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT-TGTTGGCATGCACAAA
**
15834946 AAAATTCAG-T-AAAACTC-ATAGT-TACAAGAATTTTGTG-CCATTTTGATAACCA-TGTCCCC
511 AAAATTCAGCTAAAAACTCGA-AGTGTACAAG-ATTTTGTGACCA-TTTGA-AAAAAGTGTCCCC
* * * *
15835005 -TATCCGGGCACTTTAATGGCTACT-GC-GCAAAACCTGTAAAATCTCAAATGCTCTTTAAGTGG
572 AT-TTCAGACACTTTAATGGCTACTGGCAGC-AAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
15835067 GTGTGAGTTCTTGAGGTTTGATTAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
635 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
15835132 CGCATATCATGTGAGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAG
700 CGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
* * * ** * *
15835197 GTTCTCCGATGATGCTCTGGCGACGGTGCCCCGGTGAAGAAAAATGCAGAACCAACACATGCCCG
764 GTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCG
* ** * * * *
15835262 AGCCCAGGATGTAAT-ACTGCAACCCTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTCTGTA
829 AGCCCAGCATGTGCTGTC-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
15835326 TGCT
893 TGCT
* * * * * * *
15835330 TAGACGGGGAATGAACTCCATTTGCCTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAGTCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
* * * * * * *
15835395 GCTAGAGGGGCGGGATGCGTAAGCCGGGGATCGACCAGGTCCCCCTCTGCGTGCTACCAATCTTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * ** ** *
15835460 CTGCTGTAACCCTCAATCCAGTCCGATCTTAGACTGGGAATG---TCCGTATGCCTAAGCCAACC
131 CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * **
15835522 GACCAAACGAGCGGGCGGGCGGGCGGGCACTGCGTCGGCCAGAGGGACGGGATGCGCAAGTTGTG
196 GACGAAACGAGCGGAC---CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * * *
15835587 GATCAATAGGGTTGCT-GGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTT
258 GATCGATAGGG-TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTT
*
15835651 ATGGCTTGTAAATT-ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTC
322 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * * * *
15835715 ATTTTTTATTTTTCACGATTTTCGAAAC-CTTTGCGGTTTGAGATTTTTT-AAATTTTTTCGAAA
387 ATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAA
* * *
15835778 GAAGTTTT-GCCCCAAACTTGGTAGACCTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATT
452 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * *
15835842 CAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAATGTGTTCCCATTTCAGACA
517 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
15835907 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
582 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * *
15835972 GAGGTTTGATGAGGGATATGGGACCAATATAAGGGCCAAGTCCCAGCACCCATCACACATCATGT
647 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
** * *
15836037 GCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGTCGCCGATCAGGTTCTCCGACGA
712 GCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
** * *
15836102 TGCT-CGGACGATGGTGCCCCGGTGAAGAAAAATGCTGCACCAACACATGCCCGAGCCCAGCATA
776 TGCTCCGG-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * * * *
15836166 TGATGCCGCAACCCTCGGTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATGCT
840 TGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
** *
15836223 TAGACTGGGAATGAACTCTATATGCCTAAGTC-A---ACG--ACCAGA--------G----G--G
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
* * * * **
15836268 G-CAGA--------ATGCGTAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTATCGATCCTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * * * * *
15836324 CTGCCCCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACT
131 CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * *
15836389 GACAAAATGAGCGGGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGATGGGATGCGCAAGCCGTG
196 GACGAAACGAGCGGAC---CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
*
15836454 GATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-TGTGCCAATGCCATTTTT
258 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCT-TGCCAATGCCATTTTT
* * *
15836518 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTGTCATGGCAAGATGACTC
322 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* ** ** * * *
15836583 ATTTTTTATTTTTCATAATTTTCAAAACTTTTTACGGTTTGGAATTTTTTAAAATTTTTTCGGAA
387 ATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAA
** * *
15836648 GGAGTTTTGGCCCCAAACTTGGTAGACACGA-CCTTGTATTTTTTTTGGCATGCACAAAAAACTT
452 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
15836712 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
517 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
15836777 CTTTAATGTCAACTGGCAGCAAACCTGTAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTC
582 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
15836842 GAGCTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
647 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* *** * * * *
15836907 GCACACACCCCCCCAACCCCCCGATCGTTGGAACCCTAATGCTGCCAGTCAGG-T-T----C--T
712 GCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * * *
15836964 --T-C-G-G-TGATGCTCCGGCGAAGAAAAATGCGGCACCAACACATGCTCGAGCCCAGCATGTG
777 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
* *
15837023 CTGT-GTAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
842 CTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
15837076 CTAAGCCAAC
Statistics
Matches: 8290, Mismatches: 991, Indels: 782
0.82 0.10 0.08
Matches are distributed among these distances:
817 25 0.00
818 20 0.00
819 1 0.00
820 1 0.00
821 5 0.00
823 4 0.00
824 2 0.00
825 1 0.00
828 3 0.00
831 52 0.01
832 83 0.01
833 27 0.00
834 34 0.00
835 37 0.00
836 272 0.03
837 290 0.03
838 45 0.01
839 6 0.00
840 69 0.01
841 5 0.00
842 21 0.00
843 14 0.00
844 253 0.03
845 122 0.01
846 255 0.03
847 58 0.01
848 68 0.01
849 18 0.00
850 18 0.00
851 2 0.00
852 1 0.00
853 44 0.01
854 48 0.01
855 56 0.01
856 1 0.00
857 2 0.00
858 75 0.01
859 79 0.01
860 6 0.00
861 4 0.00
862 16 0.00
863 10 0.00
864 84 0.01
865 4 0.00
866 27 0.00
867 151 0.02
868 199 0.02
869 410 0.05
870 345 0.04
871 38 0.00
872 65 0.01
873 21 0.00
874 4 0.00
875 9 0.00
876 37 0.00
877 37 0.00
878 100 0.01
879 44 0.01
880 38 0.00
881 18 0.00
882 13 0.00
883 13 0.00
884 19 0.00
885 12 0.00
886 20 0.00
887 75 0.01
888 82 0.01
889 55 0.01
890 69 0.01
891 16 0.00
892 130 0.02
893 332 0.04
894 49 0.01
895 535 0.06
896 306 0.04
897 31 0.00
898 3 0.00
899 8 0.00
900 316 0.04
901 277 0.03
902 61 0.01
903 48 0.01
904 682 0.08
905 351 0.04
906 80 0.01
907 280 0.03
908 317 0.04
909 219 0.03
910 23 0.00
911 8 0.00
912 46 0.01
913 18 0.00
914 6 0.00
915 6 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (896 bp):
TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCG
GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACGAAACGAGCGGACCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTTATGG
CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTT
TCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTC
CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGT
CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
Found at i:15831013 original size:26 final size:26
Alignment explanation
Indices: 15830984--15831036 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15830974 CCGGTCTAAT
15830984 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15831010 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15831036 C
1 C
15831037 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15832717 original size:26 final size:26
Alignment explanation
Indices: 15832679--15832758 Score: 108
Period size: 26 Copynumber: 3.0 Consensus size: 26
15832669 CCGGTCTGAT
*
15832679 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
*
15832705 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
*
15832731 CTTAAGACTGAGAAGTGAAC-TCGTATG
1 CTT-AGACTGGGAA-TGAACTTCGTATG
15832758 C
1 C
15832759 CTAGTCAAAC
Statistics
Matches: 48, Mismatches: 4, Indels: 3
0.87 0.07 0.05
Matches are distributed among these distances:
26 27 0.56
27 16 0.33
28 5 0.10
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:15833566 original size:26 final size:26
Alignment explanation
Indices: 15833537--15833592 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
15833527 CTGGTCCGAT
*
15833537 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
15833563 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
15833589 CTTA
1 CTTA
15833593 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.29, C:0.20, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:15834469 original size:26 final size:26
Alignment explanation
Indices: 15834433--15834485 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15834423 CCAGTCTGAT
15834433 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15834459 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15834485 C
1 C
15834486 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15836246 original size:26 final size:26
Alignment explanation
Indices: 15836195--15836247 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15836185 CTGATCCGAT
*
15836195 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
* *
15836221 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTAGGAATGAACTCCATATG
15836247 C
1 C
15836248 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:15839159 original size:903 final size:902
Alignment explanation
Indices: 15837029--15843120 Score: 7903
Period size: 899 Copynumber: 6.8 Consensus size: 902
15837019 TGTGCTGTGT
* * * *
15837029 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAA
1 AACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
15837094 CGA----TCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCGAGTCGTGGATCGAT
66 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* * * * *
15837155 AGCGTGTTAGATTGGTTTCGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
131 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
*
15837220 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTA
196 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
*
15837285 TTTTTCACGATTTTTGAAAA-TTTTTGCGGTT-GGGATTTTTTAAAATTTTTTCGGAAGGAGTTT
261 TTTTTCACGA-TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTT
* *
15837348 TGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
325 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAA
* *
15837412 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAGAAAAGTGTTCCCATTTCAGACACTTTAAT
390 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
** * *
15837477 ATCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
455 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTT
*
15837542 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACA
520 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* *
15837607 CCCCCCTCGACCCCCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCT-C--C-A-----
585 CCCCCCCCGA-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTC
* ** * * * *
15837663 --AC-A--ATGCTTCGACGAAGAAAAATACGGCACCAACACATGCCCGACCCCAGCATGTGCTGT
649 CGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGC
* * * * * * *
15837723 CGTAACCCTCGGTTCGGTCCGATATTAGACTGCGAATGAACTCTGTATGGTTAGACAGGGAATGA
714 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * * * *
15837788 ACTCTGTAAGCCCT-AGTCAACCAACGAAACGAGCGTGCAGGTGCTCAACCGACCAGAAGGGCGG
779 ACTCCGCATG-CCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGA
* * * * * * *
15837852 GATGCACAAGCTGGGGATCGACCCGGTCCCCCTTTGCGTGCTGTCGATCCTGCTGC-CGC
843 GATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCTCGC
* * * *
15837911 AACCCTTGGTCCGATCTGATCTTAGACTGAGAATGAACTCTGTATGCCTAAGCCAACTGACGAAA
1 AACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* *
15837976 CGA----GCGGGCGGGCGGGCACTACGCCTGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGAT
66 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* * * * *
15838037 AGGATGGTAGGTGGGTTTCGGGACAACTTCATGTTTCTGCATGCCAATGCCATTTTTATGGCTTG
131 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
15838102 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
196 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
** *
15838167 TTTTTCATTATTTTCAAAAATTTTTGCGGTTCGGGATTTTTTAAAAATTTTTT-GGAAGGAGTTT
261 TTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTT-AAAATTTTTTCGGAAGGAGTTT
* *
15838231 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATTCATAAAAAAATTAAGCTAA
325 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAA
* *
15838296 AAACTCAAAGTGTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
390 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * *
15838361 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTTTTTAAAGGGGTGTGAGTTCTCGAAGTTT
455 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTT
* *
15838426 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCCTGTGCGCACA
520 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
*
15838491 CCGCCCCCCGACCCCCCCGATCGTTGGAACCCCAATGCCGTCGGTCAGGTTCTTCCGGCGATGCT
585 CC-CCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC-TCCGGCGATGCT
* * * *
15838556 CCGACGGTGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAACATGTGCTG
648 CCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
* * * *
15838621 TCGCAACCCTCGATCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTGGACTGGGAATG
713 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * *
15838686 AACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAGCCAGCCAGAGGGGCAA
778 AACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGA
* * * * * * *
15838751 GATGCCCAAGCCGAGGATCGATCGGATCCCTCTCTCCTTACTGGCGATCCTACTGCT-GC
843 GATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCTCGC
* * * * * *
15838810 AACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAACCAATCGATGAAA
1 AACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
15838875 CGAGCAGGCAGGCGGGCGGGCACTACACCGGCCAGAGAGACGGCATGCGTAAGCCGTGGATCGAT
66 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* *
15838940 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCACTGCCATTTTTATGGCTTG
131 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
15839005 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
196 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * *
15839070 TTTTTCACGATTTTCAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
261 TTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* *
15839135 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAGAAAATTAACCTAAA
326 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAA
15839200 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
391 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
*
15839265 GTTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGAGTGTGAGTTCTCGAGGTTT
456 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGG-GTGTGAGTTCTCGAGGTTT
* * *
15839329 GATGATGGATAGGGGG-CACATATAAGGGCCAAGTACCAGAACCCATCACACATCATGTGCGCAC
520 GATGAGGGATAGGGGGCCA-ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * * * * *
15839393 ACCCCCCTCGACCCCCTCGATCGTCGAAACCCCGATGTCGCCGGTCAGGTTCTCCGGTGATACTC
584 ACCCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTC
** * * *
15839458 CGGTGATGGTGCCCCGATGAAGAAAAATACGGCACCAACACATGCTCGAGCCCAGCATGTGCTAC
649 CGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGC
* * ** *
15839523 CGTAACCCTCGATTTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGAC--------A
714 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * *
15839580 A----G---G---AA-TGAA--CTC----C-A---TGCGGGTGCTCAGCCAGCCAGAGGGGCGGC
779 ACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGC-G-
* ** ** *
15839624 ATATG--CAAGCCGAGGATCGGCCGGGTCCAACTCTACGTGCTGCCGATCCTACTG-TCGC
842 AGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCTCGC
* *
15839682 AACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA
1 AACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* ** *
15839746 CGAGCGAGCGAGCGGGCGGGCGGGCGGCACTACACTAGCTAGAGAGACGGGATGCGCAAGCCGTG
66 CGAGC--G-G-GCGGGCGGGC--G-GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
15839811 GATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCATGCGAATGCCATTTTTA
124 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * *
15839876 TGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCA
189 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* ** *
15839941 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GAAAG
254 TTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * *
15840005 GAGTTTTAGG-CCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAACTT
319 GAGTTTT-GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATT
* * *
15840069 CAA-CTAAAAACTCGAAGCGTACAAGATTTTGTGACCATTTAAAAAAAGTATCCCCA-TTCTAGA
383 -AAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGA
* * *
15840132 CACTTTAATTGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGCTC
446 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTC
* * *
15840197 TCGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCATATCAT
511 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
15840262 GTGGGCACACCGCCCCCCGACCCCCCCGATCGTTGGAACCCCAATGCTGTCGGTCAGGTTCTCCG
576 GTGCGCACACC-CCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* ** * * * *
15840327 GTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGGCACCAATAGATGCCCTAGCCCAGC
640 GCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* * *
15840392 ATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
705 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * * * *
15840457 TAGGAATGAACTCCGCACGCCTAAGTCAAACCACGAAATGAGTGTGTGGGTGCTCAACCGGCCAG
770 TGGGAATGAACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAG
* ** * * * *
15840522 AGGGGCAAGATGTGCAAGCTGAGGATCGATCGGATCCCCCTCTGCTTGCTGCCGATCCTACTAC-
835 AGGGGCGAGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCT
15840586 CGC
900 CGC
* * **
15840589 AATCCTCAGTCTTATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
1 AACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*
15840654 CGAGCGGGCGGGCGGGCGAGTTGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
66 CGAGCGGGCGGGCGGGC--------GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
* *
15840719 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAAAGCCATTTTT
123 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* **
15840784 ATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGTTAAG-CAGACT
188 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC-GACT
* * * * * * * *
15840848 CATTTTTTATTTTCCCATGATTTTCGAAACATTTTGTGGTTCGGGATTTTTTAAAATTTTTTCAG
252 CGTTTTCTATTTT-TCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
15840913 AAGGAGTTTTGGCCCC-AACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
316 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
* *
15840977 TTAAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
381 TTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
15841042 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCCCAAATGCTCTTT-AAGGGGCTATGAGTT
446 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGG-TGTGAGTT
* * * *
15841106 CTTGAGGTTTGATGACGGATAGGGGGCCCATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
510 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** * *
15841171 TGTGCGCACA--------G--CCCCCCGATCATCGGAACCCTGATGCCGCCGCTCAGGTTCTCCG
575 TGTGCGCACACCCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * *
15841226 GTGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACATATGCCCGAGCCCAGC
640 GCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* * * **
15841291 ATGTGCTGCTGTAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTTGTATGCTTAGAC
705 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* *
15841356 TGGGAATGAACTCCGTATGCCTAAGACAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAG
770 TGGGAATGAACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAG
* ** * * * *
15841421 AGGGGCGAGATGCACAAGCCGGGGATCGATCGGGTCCCATTCTACGTGCTGCTGATCCT-GTGGT
835 AGGGGCGAGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCT
*
15841485 CAC
900 CGC
* * *
15841488 AACCCTCGGTCCGATCTGATCTTAGAC-GGGAATGAACTCCGTATGTCTAAGCCGACCGACAAAA
1 AACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
15841552 CGAGCGGGCGGGCGGGC-GGCACTGCGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAAT
66 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* * * *
15841616 AGGGTGATACGTGGGTTTAGACACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTT
131 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
* *
15841681 TAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTTGTTTTCTA
196 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* ** *
15841746 TTTTTCACGATTTTCAAAACTTTTTGAGGTTCGACATTTTTTAAAATTTTTTCGAAAGGAGTTTT
261 TTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* *
15841811 GGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
326 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAA
* *
15841876 ACCTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATGTT-AGACACTTTAAT
391 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT-TTCAGACACTTTAAT
* * * *
15841940 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGTGTTCTGGAGGTTT
455 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTT
* * *
15842005 GAAGAGGGATAGGGGGCCAATATAATGGCCAAGTACC-GAACCCATCGCACATCATGTGCGCACA
520 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * *
15842069 --CCCCTCGACCCCCCCGATCATCGAAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGCTCC
585 CCCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCC
* * * *
15842132 GGCGATGGTGCCCCGATGAAGAAAAATACGGCTCCAACACATGCCCGAGCCCAGCATGTGCTGTC
650 GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCC
*
15842197 ACAA-CC-C--T-CGGTCCGATC-----C-------G-A-----TA---TTAGACTGGGAATGAA
715 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * *
15842236 CTCCGTATGCCTAAGTCAACCCACAAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGA
780 CTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGAGA
* * * * * *
15842301 TGCGCAAGCC-AGGGATTGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTACT-ATCAC
845 TGCACAAGCCGA-GGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCTCGC
** * *
15842358 AACCCTCACTCC-AGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAA
1 AACCCTCGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * ** * *
15842422 ACGAGCGGGCGGGCGGGCGTGCACTACGTCGACCAGAGAGGCGGGATGCATAAGCTGTGGACCGA
65 ACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
* ** *
15842487 TAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTCTGGCTT
130 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
* * * *
15842552 GTAAATTAATACAACGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTTGTTTTCT
195 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * *
15842617 ATTTTTCACGATTTTCGAAACTTTTTGCGGTTCGAGATGTTTTAAAATTTTTTTGGAAGGAGTTT
260 ATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTT
* * *
15842682 TGGCCCCAAACCTGGTAG-CTGTGATCCTTGTATTTTTTTTGGCGTGCACAAAAAAATTCAGCTA
325 TGGCCCCAAACTTGGTAGAC-GTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTA
*
15842746 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
389 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
15842811 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGTGGTGTGAGTTCTCGAGAT
454 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGG-GGTGTGAGTTCTCGAGGT
* * *
15842875 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCTAGCACCCATCACACATCATGTGCGCA
518 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * ** *
15842940 CACCCCCTCCCG-CCCTCCCCGATCGTCGAAACCCCAATGTCGTCGGTCAGGTTTTTTGACGATG
583 CACCCCC-CCCGACCC-CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATG
* *
15843004 C-CCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
646 CTCCGA-CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
15843068 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT-CGTATGC
710 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
15843121 CTAAGCCAAC
Statistics
Matches: 4573, Mismatches: 494, Indels: 267
0.86 0.09 0.05
Matches are distributed among these distances:
869 1 0.00
870 141 0.03
871 113 0.02
872 498 0.11
873 27 0.01
874 5 0.00
875 18 0.00
876 112 0.02
877 238 0.05
878 381 0.08
879 1 0.00
880 3 0.00
881 18 0.00
882 256 0.06
883 26 0.01
884 289 0.06
885 8 0.00
886 6 0.00
888 84 0.02
889 365 0.08
890 9 0.00
891 9 0.00
892 1 0.00
893 4 0.00
894 3 0.00
895 2 0.00
896 110 0.02
897 3 0.00
898 57 0.01
899 544 0.12
901 117 0.03
902 59 0.01
903 462 0.10
904 11 0.00
905 5 0.00
906 1 0.00
907 73 0.02
908 58 0.01
909 173 0.04
910 268 0.06
911 14 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (902 bp):
AACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
TTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAA
AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTG
ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
CCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCG
ACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCG
CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
TCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGAGAT
GCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCTCGC
Found at i:15841373 original size:26 final size:26
Alignment explanation
Indices: 15841323--15841375 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15841313 CTGGTCCGAT
**
15841323 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15841349 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15841375 C
1 C
15841376 CTAAGACAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15842689 original size:872 final size:872
Alignment explanation
Indices: 15837029--15843200 Score: 7355
Period size: 872 Copynumber: 7.0 Consensus size: 872
15837019 TGTGCTGTGT
* * *
15837029 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAA
1 AACCCTCGGTC-CGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
15837094 CGATCGGGCGGGC--G-GGCACTACGCCGGCCAGAGAGACGGGATGCGCGAGTCGTGGATCGATA
65 CGAGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* * * *
15837156 GCGTGTTAGATTGGTTT-CGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
130 GGGTGGTAGGTGGGTTTAC-GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
*
15837220 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTA
194 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* *
15837285 TTTTTCACGATTTTTGAAAATTTTTGCGGTT-GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
259 TTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
*
15837349 GG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
324 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
* * *
15837413 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAGAAAAGTGTTCCCATTTCAGACACTTTAATA
389 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
15837478 TCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
454 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
*
15837543 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACAC
519 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
* ** *
15837608 CCCCCTCGACCCCCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCAAC-A--AT--
583 CCCCCTCGA-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCC
* * *
15837668 -GC--T--T----CGACGAAGAAAAATACGGCACCAACACATGCCCGACCCCAGCATGTGCTGTC
647 GGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTC
* * * * *
15837724 GTAACCCTCGGTTCGGTCCGATATTAGACTGCGAATGAACTCTGTATGGTTAGACAGGGAATGAA
712 GCAACCCTCGGTCCGATCCGATATTAGACTGGGAATGAACTC------------C---GTATG--
* * * *
15837789 CTCTGTAAGCCCTAGTCAACCAACGAAACGAGCGTGCAGGTGCTCAACCGACCAGAAGGGCGGGA
760 C-C--T-A-----AGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGA
* * * * * * * * *
15837854 TGCACAAGCTGGGGATCGACCCGGTCCCCCTTTGCGTGCTGTCGATCCTGCTGCCGC
816 TGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGTCGC
* * * *
15837911 AACCCTTGGTCCGATCTGATCTTAGACTGAGAATGAACTCTGTATGCCTAAGCCAACTGACGAAA
1 AACCCTCGGTCCG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* *
15837976 CGAGCGGGCGGGC--G-GGCACTACGCCTGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATA
65 CGAGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* * * *
15838038 GGATGGTAGGTGGGTTT-CGGGACAACTTCATGTTTCTGCATGCCAATGCCATTTTTATGGCTTG
130 GGGTGGTAGGTGGGTTTAC-GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
15838102 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
194 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
** * *
15838167 TTTTTCATTATTTTCAAAAATTTTTGCGGTTCGGGATTTTTTAAAAATTTTTT-GGAAGGAGTTT
259 TTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTT-AAAATTTTTTCGGAAGGAGTTT
* * *
15838231 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATTCATAAAAAAATTAAGCTAA
323 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
* *
15838296 AAACTCAAAGTGTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
388 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * * *
15838361 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTTTTTAAAGGGGTGTGAGTTCTCGAAGTTT
453 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
15838426 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCCTGTGCGCACA
518 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* *
15838491 CCGCCCCCCGACCCCCCCGATCGTTGGAACCCCAATGCCGTCGGTCAGGTTCTTCCGGCGATGCT
583 -C-CCCCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC-TCCGGCGATGCT
* * * * *
15838556 CCGACGGTGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAACATGTGCTG
645 CCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
15838621 TCGCAACCCTCGATCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTGGACTGGGAATG
710 TCGCAA-CC-C--T-CGGTCCGATC-----C---G-AT--A-T---TA------GACTGGGAATG
* * * * **
15838686 AACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAGCCAGCCAGAGGGGCAA
749 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGG
* * * * * * *
15838751 GATGCCCAAGCCGAGGATCGATCGGATCCCTCTCTCCTTACTGGCGATCCTACTG-CTGC
814 GATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGTC-GC
* * * * * *
15838810 AACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAACCAATCGATGAAA
1 AACCCTCGGTCCG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
15838875 CGAGCAGGCAGGCGGGCGGGCACTACACCGGCCAGAGAGACGGCATGCGTAAGCCGTGGATCGAT
65 CGAGCGGGCGGGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* * *
15838940 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCACTGCCATTTTTATGGCTTG
129 AGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
15839005 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
194 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * *
15839070 TTTTTCACGATTTTCAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
259 TTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* * *
15839135 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAGAAAATTAACCTAAA
324 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
15839200 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
389 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
15839265 GTTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTG
454 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * *
15839330 ATGATGGATAGGGGG-CACATATAAGGGCCAAGTACCAGAACCCATCACACATCATGTGCGCACA
519 ATGAGGGATAGGGGGCCA-ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * * * *
15839394 CCCCCCTCGACCCCCTCGATCGTCGAAACCCCGATGTCGCCGGTCAGGTTCTCCGGTGATACTCC
583 -CCCCCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCC
* * * **
15839459 GGTGATGGTGCCCCGATGAAGAAAAATACGGCACCAACACATGCTCGAGCCCAGCATGTGCTACC
647 GGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTC
* * ** * * * * * *** *
15839524 GTAACCCTCGATTTGGTCCGATCTTAGACTGGGAATGAACTCCATATG-CTTAGACAAGGAATG-
712 GCAACCCTCGGTCCGATCCGATATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
** * * * * ** **
15839587 AAC-TCCATGCGGGTGCTCAGCCAGCCAGAGGGGCGGCATATGCAAGCCGAGGATCGGCCGGGTC
777 AACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTC
** *
15839651 CAACTCTACGTGCTGCCGATCCTACTGTCGC
842 CCCCTCTGCGTGCTGCCGATCCTACTGTCGC
*
15839682 AACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA
1 AACCCTCGGTCC-GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A
* ** *
15839746 CGAGCGAGCGAGCGGGCGGGCGGGCGGCACTACACTAGCTAGAGAGACGGGATGCGCAAGCCGTG
63 --A---A-CGAGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
** *
15839811 GATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCATGCGAATGCCATTTTTA
122 GATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * *
15839876 TGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCA
187 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * *
15839941 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GAAAG
252 TTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * *
15840005 GAGTTTTAGG-CCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAACTT
317 GAGTTTT-GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATT
* * * *
15840069 CAACTAAAAACTCGAAGCGTACAAGATTTTGTGACCATTTAAAAAAAGTATCCCCA-TTCTAGAC
381 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGAC
* * * *
15840133 ACTTTAATTGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGCTCT
445 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
15840198 CGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCATATCATG
510 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * *
15840263 TGGGCACACCGCCCCCCGACCCCCCCGATCGTTGGAACCCCAATGCTGTCGGTCAGGTTCTCCGG
575 TGCGCACA-C-CCCCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGG
* * ** * * * *
15840328 TGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGGCACCAATAGATGCCCTAGCCCAGCA
638 CGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* * *
15840393 TGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACT
703 TGTGCTGTCGCAACCCTCGGTCCGATCCGATATTAGACTGGGAATGAA--C----T-C-----C-
* * * *
15840458 AGGAATGAACTCCGCACGCCTAAGTCAAACCACGAAATGAGTGTGTGGGTGCTCAACCGGCCAGA
755 --G--T--A-T------GCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGA
** * * * * **
15840523 GGGGCAAGATGTGCAAGCTGAGGATCGATCGGATCCCCCTCTGCTTGCTGCCGATCCTACTACCG
807 GGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGTCG
15840588 C
872 C
* * **
15840589 AATCCTCAGTCTTATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
1 AACCCTCGGTC-CGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*
15840654 CGAGCGGGCGGGCGGGCGAGTTGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
65 CGAGCGGGCGGGCGGGC---------GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
* * *
15840719 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAAAGCCATTTTT
121 GGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* **
15840784 ATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGTTAAG-CAGACT
186 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC-GACT
* * * * * * *
15840848 CATTTTTTATTTTCCCATGATTTTCGAAACATTTTGTGGTTCGGGATTTTTTAAAATTTTTTCAG
250 CGTTTTCTATTTT-TCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
15840913 AAGGAGTTTTGGCCCC-AACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
314 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
* * *
15840977 TTAAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
379 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
15841042 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGCTATGAGTTC
444 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
15841107 TTGAGGTTTGATGACGGATAGGGGGCCCATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
509 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * * *
15841172 GTGCGCACA-------G--CCCCCCGATCATCGGAACCCTGATGCCGCCGCTCAGGTTCTCCGGT
574 GTGCGCACACCCCCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGC
* * *
15841228 GATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACATATGCCCGAGCCCAGCAT
639 GATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
*
15841293 GTGCTG-CTGTAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTTGTATGCTTAGACT
704 GTGCTGTC-GCAA-CC-C--TC-GGTCCGATC-----C-------G-A-----TA---TTAGACT
*
15841357 GGGAATGAACTCCGTATGCCTAAGACAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGA
742 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGA
* * * ** * * *
15841422 GGGGCGAGATGCACAAGCCGGGGATCGATCGGGTCCCATTCTACGTGCTGCTGATCCT-GTGGTC
807 GGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACT-GTC
*
15841486 AC
871 GC
* * *
15841488 AACCCTCGGTCCGATCTGATCTTAGAC-GGGAATGAACTCCGTATGTCTAAGCCGACCGACAAAA
1 AACCCTCGGTCCG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
15841552 CGAGCGGGCGGGCGGGCGGCACTGCGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAATA
65 CGAGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* * *
15841617 GGGTGATACGTGGGTTTA-GACACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTT
130 GGGTGGTAGGTGGGTTTACG-CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
* *
15841681 TAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTTGTTTTCTA
194 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * ** *
15841746 TTTTTCACGATTTTCAAAACTTTTTGAGGTTCGACATTTTTTAAAATTTTTTCGAAAGGAGTTTT
259 TTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
*
15841811 GGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
324 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
* *
15841876 ACCTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATGTT-AGACACTTTAAT
389 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT-TTCAGACACTTTAAT
* * *
15841940 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGTGTTCTGGAGGTTT
453 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * *
15842005 GAAGAGGGATAGGGGGCCAATATAATGGCCAAGTACC-GAACCCATCGCACATCATGTGCGCACA
518 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * *
15842069 -CCCCTCGACCCCCCCGATCATCGAAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGCTCCG
583 CCCCCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCG
* * *
15842133 GCGATGGTGCCCCGATGAAGAAAAATACGGCTCCAACACATGCCCGAGCCCAGCATGTGCTGTCA
648 GCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCG
*
15842198 CAACCCTCGGTCCGATCCGATATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAA
713 CAACCCTCGGTCCGATCCGATATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * *
15842263 ATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC-AGGGATTGGTCGGGTC
778 ACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGA-GGATCGATCGGGTC
* * *
15842327 CCCCTCTGCGTGCTGTCGATCCTACTATCAC
842 CCCCTCTGCGTGCTGCCGATCCTACTGTCGC
** * *
15842358 AACCCTCACTCCAGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAA
1 AACCCTCGGTCC-GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * ** * *
15842423 CGAGCGGGCGGGCGGGCGTGCACTACGTCGACCAGAGAGGCGGGATGCATAAGCTGTGGACCGAT
65 CGAGCGGGCGGGCGGGCG-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
** *
15842488 AGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTCTGGCTTG
129 AGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
* * * *
15842553 TAAATTAATACAACGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTTGTTTTCTA
194 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * *
15842618 TTTTTCACGATTTTCGAAACTTTTTGCGGTTCGAGATGTTTTAAAATTTTTTTGGAAGGAGTTTT
259 TTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* *
15842683 GGCCCCAAACCTGGTAG-CTGTGATCCTTGTATTTTTTTTGGCGTGCACAAAAAAATTCAGCTAA
324 GGCCCCAAACTTGGTAGAC-GTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
*
15842747 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAT
388 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* *
15842812 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGTGGTGTGAGTTCTCGAGATTT
453 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * *
15842877 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCTAGCACCCATCACACATCATGTGCGCACA
518 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * ** * *
15842942 CCCCCTCCCG-CCCTCCCCGATCGTCGAAACCCCAATGTCGTCGGTCAGGTTTTTTGACGATGCC
583 CCCCCT--CGACCC-CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCT
* *
15843006 CCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
645 CCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
* * * * *
15843071 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT-CGTATGCCTAAGCCAACCGAC
710 TCGCAACCCTCGGTCCGATCCGATATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* ** * * * ** * *
15843135 GAAACGAGCGGGCGGGCACT-ACATCGGCCAGAGAGACGGGATGCGCAAAACGTGGATCGATAGG
775 GAAACGAGCGTGCGGGTGCTCA-ACCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGG
15843199 GT
839 GT
15843201 TGTAGGTGGG
Statistics
Matches: 4596, Mismatches: 524, Indels: 347
0.84 0.10 0.06
Matches are distributed among these distances:
870 141 0.03
871 102 0.02
872 506 0.11
873 33 0.01
874 15 0.00
875 91 0.02
876 148 0.03
877 240 0.05
878 360 0.08
879 16 0.00
880 1 0.00
881 3 0.00
882 260 0.06
883 24 0.01
884 291 0.06
885 12 0.00
886 2 0.00
887 2 0.00
888 86 0.02
889 368 0.08
890 4 0.00
891 11 0.00
892 2 0.00
893 1 0.00
894 2 0.00
895 4 0.00
896 112 0.02
897 3 0.00
898 55 0.01
899 423 0.09
900 23 0.01
901 75 0.02
902 54 0.01
903 458 0.10
904 19 0.00
905 11 0.00
906 4 0.00
907 78 0.02
908 52 0.01
909 167 0.04
910 277 0.06
911 14 0.00
912 1 0.00
913 4 0.00
915 1 0.00
916 2 0.00
917 1 0.00
918 1 0.00
919 3 0.00
922 1 0.00
923 1 0.00
925 31 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (872 bp):
AACCCTCGGTCCGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
GAGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
GGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAA
CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
CCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCG
ATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAA
CCCTCGGTCCGATCCGATATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
AGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCC
TCTGCGTGCTGCCGATCCTACTGTCGC
Found at i:15845248 original size:26 final size:26
Alignment explanation
Indices: 15845218--15845270 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15845208 GTTGACTTAG
15845218 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
15845244 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15845270 G
1 G
15845271 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15846161 original size:26 final size:26
Alignment explanation
Indices: 15846125--15846177 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15846115 GTTGACTTAG
15846125 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15846151 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15846177 G
1 G
15846178 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15847030 original size:26 final size:26
Alignment explanation
Indices: 15846990--15847042 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15846980 GTTGACTTAG
*
15846990 GCATACAGAGATCATTCCCAGTCTAA
1 GCATACAGAGATCATTCCCAGCCTAA
* *
15847016 GCATACGGAGTTCATTCCCAGCCTAA
1 GCATACAGAGATCATTCCCAGCCTAA
15847042 G
1 G
15847043 ATAAGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.28, G:0.19, T:0.23
Consensus pattern (26 bp):
GCATACAGAGATCATTCCCAGCCTAA
Found at i:15847948 original size:159 final size:159
Alignment explanation
Indices: 15847705--15848067 Score: 505
Period size: 159 Copynumber: 2.3 Consensus size: 159
15847695 CGCCCGCTCG
* * * *
15847705 TTTCATCGGTTGGCTTAGGCATACGAAGTTCATTCCCAATCTAAGATCCGACCGGACTGAGGGTT
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCGACCGGACTGAGGGTT
*
15847770 GCGGCAACAGGATCAACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
66 GCGGCAACAGGATCAACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCCGCCC
* * * *
15847835 CTCTGGCTGGCTGAGCGCTCGCACGCTT-G
131 CTCTGGCCGGCTGAGCACCCGCACG-TTCA
* * * *
15847864 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTTCGAGTCTAAGAT-TGAACCGGACTGAGGGT
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCG-ACCGGACTGAGGGT
* * * * * ** *
15847928 TGTGGCAATAGGATCGACAGCACGCATAGGGGGACCTGGTCGATCCCCGGCTTGCACATCCTGCC
65 TGCGGCAACAGGATCAACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCCGCC
15847993 CCTCTGGCCGGCTGAGCACCCGCACGTTCA
130 CCTCTGGCCGGCTGAGCACCCGCACGTTCA
15848023 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
15848068 CATACGGAGT
Statistics
Matches: 178, Mismatches: 24, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
158 3 0.02
159 175 0.98
ACGTcount: A:0.20, C:0.28, G:0.29, T:0.23
Consensus pattern (159 bp):
TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCGACCGGACTGAGGGTT
GCGGCAACAGGATCAACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCCGCCC
CTCTGGCCGGCTGAGCACCCGCACGTTCA
Found at i:15848071 original size:26 final size:26
Alignment explanation
Indices: 15848041--15848093 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15848031 GTTGACTTAG
15848041 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15848067 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15848093 G
1 G
15848094 ATCGGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15850747 original size:26 final size:26
Alignment explanation
Indices: 15850711--15850787 Score: 145
Period size: 26 Copynumber: 3.0 Consensus size: 26
15850701 TTGACTTAGG
15850711 CATACGGAGTTCATTCCCAGTCTAAA
1 CATACGGAGTTCATTCCCAGTCTAAA
15850737 CATACGGAGTTCATTCCCAGTCTAAA
1 CATACGGAGTTCATTCCCAGTCTAAA
*
15850763 CATACGGAGTTCATTTCCAGTCTAA
1 CATACGGAGTTCATTCCCAGTCTAA
15850788 GATCGAACTT
Statistics
Matches: 50, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.30, C:0.26, G:0.16, T:0.29
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAGTCTAAA
Found at i:15851658 original size:26 final size:26
Alignment explanation
Indices: 15851628--15851680 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15851618 GTTGACTTAG
15851628 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15851654 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15851680 G
1 G
15851681 ATCAAACTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15852152 original size:903 final size:902
Alignment explanation
Indices: 15847864--15852935 Score: 6342
Period size: 896 Copynumber: 5.6 Consensus size: 902
15847854 CGCACGCTTG
* * * * *
15847864 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTTCGAGTCTAAGAT-TGAACCGGACTGAGGGT
1 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACTGAGGGT
*** ** * * * * * **
15847928 TGTGGCAATAGGATCGACAGCACGCATAGGGGGACCTGGTCGATCCCCGGCTTGCACATCCTGCC
65 TACAGCAGCAGGATCGACAGCACGCAGAGGGGGACC-CGCCGATCCCCTGCTTGCGCATCCCACC
* *
15847993 CCTCTGGCCGGCTGAGCACCCGCACGTTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTC
129 CCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTC
* ** *
15848058 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGA-TCGGACCAAGGGTTGCGGCAGC
194 CCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAACT-GGACCGAGGGTTGCGGCAGC
* * * * * *
15848122 ACATGCTAGGCTCGGGAATGTGTTGGTGCTACATTTTTCTTCGTCGGGGCACCATCATCGGAGCA
258 ACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCA
* * **
15848187 TCACCAGAGAACCTGACCGACCTCATTGGGGTTCCGACGATCAGGGGGGCCAAGGGGGGTGTGCG
323 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCG-CGATCAGGGGGGCC-AGGGGGGTGTGCG
* *
15848252 CACATGATGTGCAATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCTATCCCTCATCAAACCT
386 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* * * **
15848317 TGAGAACTCACACTCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTATCAGTAGCCATTAAA
451 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* *
15848382 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTAGACTTCGAGTTTTTAGCT
516 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
* * * *
15848447 GAATTTTTCTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAAATC
581 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGACAAAACTC
* ** * *
15848511 CTTTCGAAAAAATTTAAAAAAATCTTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATCGAAAA
646 CTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
* *
15848576 TGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGTGACCATTGTATGAATTTACAAGCCA
711 CGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* * * * *
15848641 TAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACTCACCTACCACCCTATCGATC
776 TAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATC
* ** * * * *
15848706 CACGGCTTGCGCATCTTGTCTCTTTGGCC-A-GCA-TAG-T-----GCCCACCCACCCGCTCA
841 CATGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGT-GCTCGCCCGCCCGCCCGCCCGCTCA
* * *
15848760 TTTCGTCGGTTGGCTTACGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC-GAATCGAGGGC
1 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACT-GAGGGT
* **** * * *
15848824 TGCAGCAGCAGGATCGACAGCATATGGAGGGGGAACCCCGCCGATCCCCGGCTTACGCATCCTAC
65 TACAGCAGCAGGATCGACAGCACGCAGAGGGGG-A-CCCGCCGATCCCCTGCTTGCGCATCCCAC
* * * * *
15848889 CCCTCTGGCGGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCAAACGGAGTTCATT
128 CCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATT
* * * * *
15848954 CCTAGTCTAAGCATACAGAGTTCATTCCCACTCCAAGATCAGA-TCAGACCGAGGGTTGCGGCAG
193 CCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAACT-GGACCGAGGGTTGCGGCAG
* * * * * *
15849018 CACATGCTAGGCTCGGGTATGTGTTGGTGCCATATTTTTCTTCGTCAGGGCACCATCGTCGGAGC
257 CACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGC
* * * * *
15849083 ATCGTCGGAGAACCAGATCGACGACATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGGTTGTGC
322 ATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCG-CGATCAGGGGGGCCAGGGGGG-TGTGC
*
15849147 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAATC
385 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
15849212 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAA
450 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
15849277 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
515 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* *
15849342 TGAATTTTTTTGTGCATGCTAACAAAAATACAAGGATCACATCTACCAAGTTT-GGGACCAAAAC
580 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGA-CAAAAC
*
15849406 TCCTTTCGAAAAAATTTTAAAAAA-CCCGAACCTCAAAAAGTTTCAAAAATCATGAAAAATAGAA
644 TCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAA
*
15849470 AGCGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
709 AACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* * *
15849535 CATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCTACCTACCACCCTATCGA
774 CATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGA
* * * * * *
15849600 TCCACGGCTTGCGCATCTCGTCTCACTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTCCACTCA
839 TCCATGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCTCGCCCGCCCGCCCGCCCGCTCA
* * * *
15849664 TTTTGTCGGTTGGCTTAGGCAAACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTT
1 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTT
* *
15849729 ACAGCAGTAGGATCGACAGCACGCAGAGGGGGA--C-CCG-------GCTTGTGCATCCCACCCC
66 ACAGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGCCGATCCCCTGCTTGCGCATCCCACCCC
* * *
15849784 TCTGGCCGACTGAGCGCCCGTACGCTTATTTCATGGG-TGCACTTAGGCATACGGAGTTCATTCC
131 TCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTG-ACTTAGGCATACGGAGTTCATTCC
* * * * * * *
15849848 CAGTCTAAGTATACAAAATTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCGGTAGCAC
195 CAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAACTGGACCGAGGGTTGCGGCAGCAC
** *
15849913 ATGCTGGGCTTTGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGTCGGAGCATC
260 ATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATC
* *
15849978 GCCGGAGAACCTGACCGATGGCATTGGGGTTCTGGCGATCA-GGGGGCCAGGGGGGTGTGCGCAC
325 GCCGGAGAACCTGACCGACGGCATTGGGGTTC-CGCGATCAGGGGGGCCAGGGGGGTGTGCGCAC
* * *
15850042 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATACTGGCCTCATATCCCTCATCAAACCTCGA
389 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
15850107 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTT--A----------CA--AG----T----TG
454 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* * * * *
15850150 TCTGAAATAGGGACACTTTTTTCAAATGGTCATAAAATCTTATGCACTTCAAGTTTTTAGCTGAA
519 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * * * *
15850215 TGTTTTTGGGCATCCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGCGGCCAAAACTCCTT
584 TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGACAAAACTCCTT
* * *
15850280 TTGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
649 TCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
*
15850345 GTCCTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
714 GTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
*
15850410 AAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCT-ATCCA
779 AAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT-TGATCCA
* * * * * *
15850474 TGGCTTACGCACCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGTCCGCCCGCTCA
843 TGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCTCGCCCGCCCGCCCGCCCGCTCA
* * * * * *
15850534 TTTCATTGGTTGGCTTAGGCATAC-AAGTTCATTCCCAGTATAAGATCAGACCGCA-TCAAGGGT
1 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACT-GAGGGT
* * * * ** * *
15850597 TAC-GACAGCAGGATCGGCACCACGCAGAGGGGGACCCGACCAATCCCCAGCTTGATCATCCTAT
65 TACAG-CAGCAGGATCGACAGCACGCAGAGGGGGACCCG-CCGATCCCCTGCTTGCGCATCCCAC
* * * *
15850661 CCCTCTGGTCGGCTGAGCCCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
128 CCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATT
*
15850726 CCCAGTCTAAACATACGGAGTTCATTCCCAGTCTAAACATACGGAGTTCATTTCCAGTCTAAGAT
193 CCCAG--T---C-TA---AG--------CA---T--AC--A--GAGTTCATTCCCAGTCTAAGAT
* * * *
15850791 CGAACTTGACCAAGGGTTGCGGCAGCACATGTTGGGCTCAGGCATGTGCTGGTGCCACATTTTTC
232 CAAACTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTC
* *
15850856 TTCGTCGGGG------CG-C----CATCGCCGGAGAACCTGACTGGCGGCATTGGGGTTCCGGCG
297 TTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCC-GCG
** ** * *
15850910 ATCAGGGGGTTC-GGGGCATGTGCGCACATGATGTGCAATGGGTGCTGGTTCTTGGCCCTTATAT
361 ATCAGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* *
15850974 TGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCACTTGAGATTTTAC
426 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* *
15851039 AGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATCGGGACACTTTTTTCAAATGGTCACAAAA
491 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * *
15851104 TCTTGTACACTTAGAGTTTTTAGCTGAATTTTTTTGTTCATGCCAAAAAAAATACAAGGATCACA
556 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACG
* *
15851169 TCTACCAAGTTTGGGGGCAAAACT-CTTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAG
621 TCTACCAAGTTTGGGGACAAAACTCCTTT-CGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
* ** * *
15851233 TTTAAAAAATCATGAAAAATAGAAAACGAGTTGTCTTACCATGAAACTTCGCGTGAAGGCTTAAG
685 TTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAG
**
15851298 GGACCATTGTATGAATTTACAAGCCATAAAAATATCATTGGCACGTAGAAATATGAAGATGTGCC
750 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCC
* * *
15851363 AAAACCCACCTACCATCCTATTGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGACATAGTGC
815 TAAACCCACCTACCACCCTATTGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGC
* * *
15851428 TCGCCCGCCCACCCGTCCGCTCG
880 TCGCCCGCCCGCCCGCCCGCTCA
* * **
15851451 TTTCGTCGGTTGGCTTAGGTATACGGAGTACATTCCCAGTCTAAGATCAGAGTGGACTGAGGGTT
1 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTT
* * * * * * * **
15851516 ACGGTAGTAGGATCGGCAGCATGCAGAGGGGGACCCGACTGATCCCTTGCTTGCGCATCCCGTCC
66 ACAGCAGCAGGATCGACAGCACGCAGAGGGGGACCCG-CCGATCCCCTGCTTGCGCATCCCACCC
* * * * * *
15851581 GTCTGGCCAGTTGAGCACCCGCACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATTCC
130 CTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCC
* * *
15851646 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAAACTGGACCGAGAGTTGCGGTAGCAC
195 CAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAACTGGACCGAGGGTTGCGGCAGCAC
* * *
15851711 ATGCTGGGCTCAGGCATGTGCTAGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATC
260 ATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATC
* *
15851776 GCCGGAGAACCTGACCGACGGTATTAGGGTTCCAGCGATC-GGGGGGCC-GGGGGGTGTGCGCAC
325 GCCGGAGAACCTGACCGACGGCATTGGGGTTCC-GCGATCAGGGGGGCCAGGGGGGTGTGCGCAC
15851839 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
389 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
* *
15851904 GAACTCACACTCCCTTAGAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
454 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* *
15851969 TTTGAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGA
519 TCTG-AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
15852034 ATTTTTTTGTGCATGCCAA-AAAACATACAAGGATCATGTCTACCAAGTTTGGGGACAAAAATCC
583 ATTTTTTTGTGCATGCCAACAAAA-ATACAAGGATCACGTCTACCAAGTTTGGGGACAAAACTCC
* * *
15852098 TTCCGAAAAAATTTAAAAAAATCCCAAACCGCAAAAA-TGTTCAAAAATCATGAAAAATAGAAAA
647 TTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT-TTCAAAAATCATGAAAAATAGAAAA
* * *
15852162 CGAGTCGTCTTACCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
711 CGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* ** *
15852227 TAAAATTATCATTGGCACAG-AGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATTGAT
776 TAAAAATGGCATTGGCAC-GTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGAT
* * *
15852291 CCGTGGCTTGCGCATCCCATCTCTCTGGCCGACGTAGTGCCTGCCTGCCCGCCCGCCCACCCGCT
840 CCATGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG-CT--C-GCCCGCCCGCCCGCCCGCT
15852356 CA
901 CA
* * * * * * * *
15852358 TTTTGTTGGTTGGCTTAGGTAGACAGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTT
1 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTT
* * * *** * * * * * *
15852423 GCAGCAACAGGATAGGTGGCATGCAGAGGGGGGCCCAACCGAT-CCTTGGCTTGTGCATCCCGCC
66 ACAGCAGCAGGATCGACAGCACGCAGAGGGGGACCC-GCCGATCCCCT-GCTTGCGCATCCCACC
*
15852487 CCTCTGGCCGGCTGAGTGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTC
129 CCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTC
** * *
15852552 CCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAACCAGACCGAGGGTTACGACAGCA
194 CCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAACTGGACCGAGGGTTGCGGCAGCA
* * * * *
15852617 CATGCTGGGCTC-GAGCATGTGTTGGTGGCACTTTTTTCTTCATCAGGGCACCATCGTCGGAGCA
259 CATGCTGGGCTCAG-GCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCA
* * *
15852681 TCACCGGAGAACCTGACCG-CTGGCATT-GGGTTCCAGCGATCAAGGGGGTCGAGGGGGTGGTGT
323 TCGCCGGAGAACCTGACCGAC-GGCATTGGGGTTCC-GCGATC-AGGGGGGCCA-GGGG-GGTGT
* *
15852744 GTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATGGGCCCCCTATCCCTCATCAAA
383 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
15852809 CCTCGAGAACTCACA-CCCCTTAAA-AGGCATTTGAGATTTTGCATGTTTGCTGCCAGTAGCCAT
448 CCTCGAGAACTCACACCCCCTTAAAGA-GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
15852872 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAGTGGTCACAAAATCTTGTACACTTCGAGTTTT
512 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
15852936 ACAGGTTTGC
Statistics
Matches: 3654, Mismatches: 400, Indels: 231
0.85 0.09 0.05
Matches are distributed among these distances:
868 1 0.00
869 196 0.05
870 238 0.07
871 1 0.00
873 3 0.00
877 2 0.00
879 2 0.00
880 71 0.02
881 2 0.00
882 1 0.00
885 1 0.00
886 2 0.00
889 3 0.00
891 107 0.03
892 314 0.09
893 1 0.00
895 155 0.04
896 514 0.14
897 266 0.07
898 8 0.00
899 6 0.00
900 4 0.00
901 2 0.00
902 152 0.04
903 365 0.10
904 101 0.03
905 2 0.00
906 104 0.03
907 312 0.09
908 6 0.00
909 56 0.02
910 56 0.02
911 83 0.02
912 2 0.00
913 2 0.00
916 6 0.00
917 362 0.10
918 143 0.04
919 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (902 bp):
TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTT
ACAGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGCCGATCCCCTGCTTGCGCATCCCACCCC
TCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCC
AGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAACTGGACCGAGGGTTGCGGCAGCACA
TGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG
CCGGAGAACCTGACCGACGGCATTGGGGTTCCGCGATCAGGGGGGCCAGGGGGGTGTGCGCACAT
GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGACAAAACTCCTTTC
GAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
CATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
ATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCATGG
CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCTCGCCCGCCCGCCCGCCCGCTCA
Found at i:15852565 original size:26 final size:26
Alignment explanation
Indices: 15852535--15852587 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15852525 GTTGACTTAG
*
15852535 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
15852561 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
15852587 G
1 G
15852588 ATCAAACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:15854916 original size:26 final size:25
Alignment explanation
Indices: 15854886--15854937 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
15854876 GTTGACTTAG
15854886 GCATACGGACTTCATTCCCAGTCTAA
1 GCATACGGACTTCATTCCCAG-CTAA
*
15854912 GCATACGGAGTTCATTCCCAGCTAA
1 GCATACGGACTTCATTCCCAGCTAA
15854937 G
1 G
15854938 ATTGGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 5 0.20
26 20 0.80
ACGTcount: A:0.27, C:0.29, G:0.19, T:0.25
Consensus pattern (25 bp):
GCATACGGACTTCATTCCCAGCTAA
Found at i:15855819 original size:26 final size:26
Alignment explanation
Indices: 15855789--15855841 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15855779 GTTGACTTAG
15855789 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
**
15855815 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
15855841 G
1 G
15855842 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:15855995 original size:903 final size:898
Alignment explanation
Indices: 15854134--15856430 Score: 3359
Period size: 903 Copynumber: 2.5 Consensus size: 898
15854124 GGCATCGTGG
* *
15854134 GAGAACCTGACC-AGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACGTGA
1 GAGAACTTGACCGA-CGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGA
* * *
15854198 TGTGCGAGGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTAAGAAC
65 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTT-GGAGC
* *
15854263 TCACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGACAGTAGCGATTAAAGTGTCTG
129 TCACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
15854328 AAATGGGGACACTTTTTCTCAAATTGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATAT
194 AAATGGGGACA-TTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-T
* *
15854393 TTTTATGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCTG
257 TTTTATGCATGCCAAAAAAAATACAAGGATCAC-TCTACCAAGTTTGGGGCCAAAAATCCTTCCG
* * * *
15854458 AAAAAATTTAAAAAAATCCTGAACCACAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTC
321 AAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTC
**
15854523 GCCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
386 ATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * *
15854588 TGGCATTGGCACACAGAAATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGC
451 TGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCCATCGATCCACGGC
* *
15854653 TTGCGCATCCCGTCTCTCTGGCCTACGTAGTGCCCGCCTGCCTGCCTGCCCGCTCGTTTTGTCAG
516 TTGCGCATCCCGTCTCTCTGGCCTAC-TAGTGCCCGCCCGCCTGCCTGCCCGCTCGTTTCGTCAG
* * * ** * *
15854718 TTGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGATTGAGGGTTGCGGTAGTA
580 TTGGCTTAAGCATACGAAATTCATTCCCAGTCTAAGATCAGACCAGAACGAGGGTTGCAGTAGCA
* * * * **
15854783 GGATCGATAGCACGTAGAGGGGGACCCCGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTAGCTG
645 GGATCAATAGCACGCAGAGGGGGACCCAGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTAGCTG
* * * *
15854848 GCTGAGTACCCGCACGCTTGTTTCATGGGTTGACTTAGGCATACGGACTTCATTCCCAGTCTAAG
710 GCTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACAGACTTCATTCCCAGTCTAAG
* * * * *
15854913 CATACGGAGTTCATTCCCAGCTAAGATTGGACCAGATCAAGGGTTGCGACAGCACATGTTGGGCT
775 CATACGGAGTTCATTCCCAGCTAAGATCGGACCAGATCAAGGGTTCCAAAAGCACATGCTGGGCT
* *
15854978 TGGGCATGTGTTGGTGCCGCATTTTTCATCGTCGGGGCACCATCATCGGAGCATCACCA
840 CGGGCATGTGCTGGTGCCGCATTTTTCATCGTCGGGGCACCATCATCGGAGCATCACCA
* * * ** * *
15855037 GAGAACTTGACCGGCGGTAATGGGGTTCCGGTGATCGAGGGGGCCGGGGGGGTGTGCGTACATGA
1 GAGAACTTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGA
*
15855102 TGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGGCAGC
65 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGG-AGC
* *
15855167 TCACACCCCCTTAAAGAGGATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
129 TCACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
15855232 AAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTT
194 AAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTT
** *
15855297 TTTATGCATGCCAAAAAAAATACAAGGATCACTCTACCAAGTTTGGGGTGAAAAATCCTTCCAAA
258 TTTATGCATGCCAAAAAAAATACAAGGATCACTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAA
** * * *
15855362 AAAATTTTAAAAAATTTTGATCCGCAACAAGTTTCGAAAATCATGAAAAATAGAAAATGAGTCAT
323 AAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCAT
* *
15855427 CTTGCCATTAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
388 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
15855492 GCATTGGCACGTAGAAAAATGAGGATGTGCCTAAACCCACCTACCACCCCATCGATCCACGGCTT
453 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCCATCGATCCACGGCTT
* *
15855557 GCGTATCCCGTCTTCTCTGGCCGGTA-TAGTGCCCGCCCGTCC-G-TTCGCCCGCTCGTTTCGTC
518 GCGCATCCCGTC-TCTCTGGCC--TACTAGTGCCCGCCCG-CCTGCCT-GCCCGCTCGTTTCGTC
* * * *
15855619 GGTTGGCTTAGGGATACGAAATTCATTCCCAGTCTAGGATCAGACCAGAACGAGGGTTGCAGTAG
578 AGTTGGCTTAAGCATACGAAATTCATTCCCAGTCTAAGATCAGACCAGAACGAGGGTTGCAGTAG
* * *
15855684 CCA-GATCAATAGCATGCAGAGGGGGACTCAGCCGATCCCCAGCTTGCGCATCCCGCCCGTCTAG
643 -CAGGATCAATAGCACGCAGAGGGGGACCCAGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTAG
*
15855748 -TCGGCTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTC
707 CT-GGCTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACAGACTTCATTCCCAGTC
* *
15855812 TAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CTGAGGGTTCCAAAAGCACATGC
771 TAAGCATACGGAGTTCATTCCCAG-CTAAGATCGGACCAGATC-AAGGGTTCCAAAAGCACATGC
* * * * *
15855876 TGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCG
834 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCATCGTCGGGGCACCATCATCGGAGCATCACCA
* * *
15855941 GAGATCTTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGTCGGAGGGTGTGCGCACATGAT
1 GAGAACTTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGAT
* * * ***
15856006 GTGTGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCCATCCCTCATCAAACCTTGAGAAAG
66 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG-GAGCT
15856071 CACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
130 CACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * * *
15856136 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGATTTTTTAGCTAAATTTTT
195 AATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
15856201 TGTGCATGCCAAGAAAAAA-ACAAGGATCATGTCTACCATGTTTGGGGCCAAAAATCCTTCCGAA
260 TATGCATGCCAA-AAAAAATACAAGGATCA-CTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAA
* ** * * *
15856265 AAGATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCTT
323 AAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCAT
*
15856330 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTTTATGAATTTACAAGCCATAAAAATG
388 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
15856395 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAAC
453 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAAC
15856431 TTGGTAGTGT
Statistics
Matches: 1245, Mismatches: 133, Indels: 32
0.88 0.09 0.02
Matches are distributed among these distances:
902 244 0.20
903 720 0.58
904 279 0.22
905 2 0.00
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.26
Consensus pattern (898 bp):
GAGAACTTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGAT
GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGGAGCTC
ACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
ATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
ATGCATGCCAAAAAAAATACAAGGATCACTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAA
ATTTTAAAAAATCCTGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCATCTT
GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCCATCGATCCACGGCTTGCG
CATCCCGTCTCTCTGGCCTACTAGTGCCCGCCCGCCTGCCTGCCCGCTCGTTTCGTCAGTTGGCT
TAAGCATACGAAATTCATTCCCAGTCTAAGATCAGACCAGAACGAGGGTTGCAGTAGCAGGATCA
ATAGCACGCAGAGGGGGACCCAGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTAGCTGGCTGAG
CACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACAGACTTCATTCCCAGTCTAAGCATACG
GAGTTCATTCCCAGCTAAGATCGGACCAGATCAAGGGTTCCAAAAGCACATGCTGGGCTCGGGCA
TGTGCTGGTGCCGCATTTTTCATCGTCGGGGCACCATCATCGGAGCATCACCA
Found at i:15857748 original size:26 final size:26
Alignment explanation
Indices: 15857719--15857771 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15857709 CTGATCCGAT
*
15857719 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
15857745 CTTAGACTGGAAATGATCTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
15857771 C
1 C
15857772 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:15858648 original size:26 final size:26
Alignment explanation
Indices: 15858609--15858661 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15858599 CCAGTCCAAT
* *
15858609 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
*
15858635 CTTAGACTGCGAATGAACTCTGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
15858661 C
1 C
15858662 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATG
Found at i:15859945 original size:901 final size:901
Alignment explanation
Indices: 15856427--15860050 Score: 4819
Period size: 908 Copynumber: 4.0 Consensus size: 901
15856417 AGATGTGCCT
* * * *
15856427 AAACTTGGTAG-TGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAACTTCAGCTAAAAACTCG
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* *
15856491 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACATTAATGGCTACT
66 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACT
* *
15856556 AGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
131 GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * *
15856621 GATAGGGGGCCAATATAAGGGCCAAGTATCAGCACCCATCACACATCATGTGCGTACA-------
196 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* * * * * * * * *
15856679 -CCCCCTGATCGTCAGAATCCCAATGTCGTCGGTCAGGTACTCCGACGTTGCTCAGACGATGGTG
261 GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTG
* * * *** * **
15856743 CCCCGACGAAGAAAAATACAACACCAACACATAATCGAGCCCAGCATATGCTACCATAACCCTCG
326 CCCCGGCGAAGAAAAATGCAGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCG
* * *
15856808 GTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGC
391 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* *
15856873 CTAAGTCAACCCACGAAACGAACGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCACAAG-C
456 CTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGTC
* * * ** *
15856937 TGGAGATCGATCGGGTCCCCCTCTTCATGTTGCCGATCTTGCTACCGCAACCCTCGGTCCGGTCT
521 -GG-GATCGATCGGGTACCCCTCTGCATGCTGCCGATCTTGCTACCGCAACCCTCATTCCGGTCC
* * * * * * * *
15857002 GATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAATCGATGAAACGAACGTGCGGATGGGG
584 AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGC
* * *
15857067 GGGCGGGCACTACGTC-AGCCAGAGAAACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
649 GGGCGGGCACTACGCCGA-CCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* * *
15857131 GGGTTTAAGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG-TTTTAAATTCATACA
713 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
15857195 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
778 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * *
15857260 TTTGAAACTTTTTACGTTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCC
843 TTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
*
15857319 AAACTTGGTAGAGGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAGAATTCAGCTAAAAACTC
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATTCAGCTAAAAACTC
* **
15857383 GAAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTTTGACACTTTAATGGCTAC
65 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTAC
* **
15857448 TGGCAGCAAATTTGTAAAATCTCAAATGCTCTTT-AAGGGGTGT-AGTTCTCGAGGTTTGATGAG
130 TGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAG
15857511 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
195 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * *
15857576 GGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCTGGCGATGGT
260 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGT
* * * * *
15857641 GCCCCGGCGAAGAAAAATGCGGTACCAAGACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTC
325 GCCCCGGCGAAGAAAAATGCAGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTC
* * * *
15857706 GGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAAATGATCTCCGTATG
390 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
15857771 CCTAAGTCAACCCACGAAATGAGCGCGCGGATGCTCAACTGGCCAAAGGGGCGGGATGCGCAAGC
455 CCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGT
* * * *
15857836 CGGGGATCGATCGGGT--CCC-C--CA--CT---G--C-TG----C-CAACCTTCAATCTGGTCT
520 C-GGGATCGATCGGGTACCCCTCTGCATGCTGCCGATCTTGCTACCGCAACCCTCATTCCGGTCC
* * * *
15857883 AATCTTAGACTTGGAATTAACTCTGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGACGGGC
584 AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGC
* * * * *
15857948 -GGCTGGGCACTACGCCTACCAAAAAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
649 GGGC-GGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
** * * *
15858012 GGGTTTAGGTGCATCTTCATATTTCTACGTTCCAATGCCATTTTTATGCCTTGTAAATTCATACA
713 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * * *
15858077 ATGGTCCCTTAAGGCTTCATGTGAAATTTCATGGCAAGACGACTCGTTTTCTATTTCTCACGATT
778 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
** * * * *
15858142 TTAAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTCTCGTAAGAAGTTTTGGCCCC
843 TTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * *
15858201 AAACTTGGTAGATGTGAGCCTTGTA-TTTTGTTGGAATGCACAAAAAAATTCAGCTAAAAACTCG
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
15858265 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACT
66 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACT
* *
15858330 GGCAGCAAACCCGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
131 GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
** *
15858395 GATAGGGGGCCAATATAAGGGCCAAGTACCATTACCCATCGCACATCATGTGCACACACCCGCCC
196 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCC
* * ** *
15858460 GGCCCCCTCGATCG-CTGGAACCCTAATGTCGCCGGTCACATTCTCCGGCGATGCTCCGCTCCGG
260 GGCCCCC-CGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA---T--GCTCCGA
* ** * *
15858524 CGATGGTGCCCCGGCAAAGAAAAATGTGGCACCAACACATGGCCGAGCCCAGCATGTGCTATCGC
318 CGATGGTGCCCCGGCGAAGAAAAATGCAGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGC
* * * * * *
15858589 AATCCTTGGTCCAGTCCAATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGCGAATGAACT
383 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * * * * * *
15858654 CTGTATGCCTAAGTCAACCCACTAAATGAGCATACGGGTGCTCAGCCAGCCAGAGTGGCGGGATT
448 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATG
* * * * * * *
15858719 TGCAAGTTGGGTATCGGTCGAGTACCCCTCTGCATGCTGCCAATCCTACTACCGCAACCCTCAGT
513 CGCAAGTCGGG-ATCGATCGGGTACCCCTCTGCATGCTGCCGATCTTGCTACCGCAACCCTCA-T
* * *
15858784 T-TGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAACGAGCGGGC
576 TCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * **
15858848 GGGCGGACGGGCGGGCACTATACCGACCAGAGAGACGGGATGCGCAAGCCGA-GGATCGATAGGG
641 GGACGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCC-ATGGATCGATAGGG
** * * *
15858912 TGGTAGGTGGGTTTAGGCATGTCTTCATATTTCTGCATTCCAATGCCATTTGTATGGCTTGTAAA
705 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAA
15858977 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
770 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * *
15859042 TCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTCAAAATTTTTTCAGAAGGAGTTTTGGCC
835 TCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
15859107 CC
900 CC
* * * *
15859109 AAACTTAGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAATACTAG
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
15859174 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTGAGACACTTTAATGGCTACT
66 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACT
*
15859238 GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGATGAGG
131 GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
15859303 GATAGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCCG
196 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* *
15859368 GCCCCCCCGATCGTCGGAACCCCAAAGCCGCCGGTCAGGTTCTCCGAG-GATGCTCCGACGACGG
261 G-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-GCGATGCTCCGACGATGG
* * * * * * *
15859432 TGCCTCGGCTAAGAAAAATGCAGCACCAGCTCATGCCCGAGTCCAGCATGTGATGCCGCAACCCT
324 TGCCCCGGCGAAGAAAAATGCAGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCT
* * * *
15859497 CGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTCTGCTTGGACTGGGAATGAACTCCGTAT
389 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * *
15859562 GCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGAGGGACGGGATGCGTAAG
454 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAG
** * * * * * *
15859627 TCGCGGATCGGCCGGGT-CCCCTCTGCGTGCTGTCGATCTTGTTGCCACAACCCTCATTCCAGTC
519 TCG-GGATCGATCGGGTACCCCTCTGCATGCTGCCGATCTTGCTACCGCAACCCTCATTCCGGTC
* * * * * *
15859691 CGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGAG
583 CAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGG
* * *
15859756 CGGGCGGGCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTACGT
648 CGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* * *
15859821 GGGTGTAGGCATATCTTCATATTTCTACATGCCAATGCCATTTTTGTGGCTTGTAAATTCATACA
713 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
** * *
15859886 ATGGTCCCTTAAGCCTTCACAAGAAGTTTCATGGCAAGACGGCTCGTTTTCTATTTTTCATGATT
778 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * *
15859951 TTTGAAAATTTTTACGGTTCGGGATTTTTTTAAATTATTTCGGAAGGAGTTTTGGCCCC
843 TTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
15860010 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
15860051 AAATATAAGG
Statistics
Matches: 2388, Mismatches: 290, Indels: 99
0.86 0.10 0.04
Matches are distributed among these distances:
880 3 0.00
881 286 0.12
882 164 0.07
883 79 0.03
884 11 0.00
885 35 0.01
886 2 0.00
887 1 0.00
888 1 0.00
889 4 0.00
890 185 0.08
891 76 0.03
892 28 0.01
893 135 0.06
894 2 0.00
895 2 0.00
896 1 0.00
897 5 0.00
899 231 0.10
900 6 0.00
901 361 0.15
902 186 0.08
903 3 0.00
904 1 0.00
907 40 0.02
908 458 0.19
909 82 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (901 bp):
AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACT
GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTG
CCCCGGCGAAGAAAAATGCAGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCG
GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
CTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGTC
GGGATCGATCGGGTACCCCTCTGCATGCTGCCGATCTTGCTACCGCAACCCTCATTCCGGTCCAA
TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGG
GCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGG
TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
Found at i:15861004 original size:26 final size:26
Alignment explanation
Indices: 15860968--15861020 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15860958 CCAGTCCAAT
*
15860968 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15860994 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15861020 C
1 C
15861021 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15862666 original size:26 final size:26
Alignment explanation
Indices: 15862637--15862689 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15862627 CCGGTCCGAT
15862637 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15862663 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15862689 C
1 C
15862690 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15865819 original size:26 final size:26
Alignment explanation
Indices: 15865783--15865832 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
15865773 CTGGTCTGAT
*
15865783 CTTAGACTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15865809 CTTAGACTGGGAATGAACTTCGTA
1 CTTAGACTGGGAATGAACTCCGTA
15865833 CGCCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.26, C:0.18, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15866984 original size:895 final size:894
Alignment explanation
Indices: 15864907--15903777 Score: 19565
Period size: 895 Copynumber: 43.0 Consensus size: 894
15864897 CCATTCCAAT
* * * * *
15864907 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAATGAGCGTGCGGGTGCTC-GT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** ** * * **
15864971 CGGCCAGAAGGGCGGGATGCGCAAGCCAAGGATCAATAGGGTCCCCCTCTACGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
15865036 CGCTGCCGCAACCCT-TAGTCTGG-TCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCC
131 TGCTGCCGCAACCCTCGA-TCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
15865099 AACCGATGAAATGAGCGAGCGGGCGGGTAGACAGGCACTATGTCGACCAGAGAGACGGGATGCGC
194 AACCGACG-AA--A-CGAGCGGGC-GG--G-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
*
15865164 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-T-CGTGTGCCAAT
251 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAC--GTGCCAAT
* * *
15865227 GCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCC
314 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * * *
15865292 GGATGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGATTTGTGATTTTTTAAAATT
379 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
15865357 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
444 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
15865422 AAAAACATTCAGCTAAAAACTCAAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCA
509 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
15865487 TTTTAGACACTTTAATGGCTACTGGCCGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
574 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
*
15865552 TGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC-GACACCCATCG
639 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG-CACCCATCG
* * *
15865616 TACATCATGTGCACACACCCCCT--GGCCCCCCCGATCGTCGGAACCCCGATGCCGCCGGTCAGG
703 CACATCATGTGCGCACACCCCCTCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * * * *
15865679 TTCTCCGACGATGCTCCGGCGATGGTGCCCC-AGCAAAGAAAAATGTGCCTCCAGCACATGCTCG
767 TTCTCCG-CGATGCTCCGGCGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCG
* * *
15865743 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAGTGAACTCCGTAT
830 AGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
15865808 G
894 G
* * * *
15865809 CTTAGACTGGGAATGAACTTCGTACGCCTAAGTCAACCCTCGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * * *
15865874 CGGCCAGAAGGGATGGATGCGCAAGCCGAGGATC-GACTTGGTCCCCCTTTGTGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * * * *
15865938 TTGCTACCACAACTCTCAATCTGGTTCGATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15866003 ACCGACGAAAGGAGCGGGCGGGCGGGCACTACGTCC-ACCAGAGAGACGGGATGCGTAAGCCGTG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACG-CCGGCCAGAGAGACGGGATGCGCAAGCCGTG
*
15866067 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTA
* *
15866132 TGGCTTGTACATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTCATGGCAAGACGACTTG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * *
15866196 TTTTTTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTTGGAAG
389 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * * * *
15866261 GAGTTTTGGCCCTAAACTTCGTAGATGTGATCCTTGTATTTTTGATGGCATGCGCAAAAAAATTC
454 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
15866326 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
519 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
*
15866391 TTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
15866456 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCGCACATCATGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * *
15866521 CGCACACCCCCTCCGGCCCCCTCGATCATCGAAACCCCAATGCCGCCGGTCAGGTTCTCCCGCAA
714 CGCACACCCCCTCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT-CCGCGA
* * * *
15866586 TGCTCCGGCGATGGTGCCCCGATGAAGAAATATGCGGCACCAACACATGCCCGAGCCCAACATGT
777 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * * *
15866651 GCTACCACAACCCTCAGTCGGGTCCGAT-TTAGACTGGGAATGAATTTCGTGTG
842 GCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15866704 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
15866769 CGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
15866834 TGTTGCCACAACCCTCGATCCGGTTCAATCTTACACTAGGAATCAACTCCGTATGCCTAAGCCAG
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
15866899 CTGATGAAACGAGCGAGCGGGCGGGCACTACGCCGGCCAAATAGACGGGATGCGCAAGCCATGGA
196 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
15866964 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-AGCGTGCCAATGCCATTTTTAT
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA-CGTGCCAATGCCATTTTTAT
*
15867028 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCAT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * * *
15867093 TTTCTATTTCTCATGATTTTTGAAAGTTTTTGCGAG-TCGAGATTTTTTAAAATTTTTT-GGAAG
390 TTTCTATTTTTCACGATTTTTGAAACTTTTTACG-GTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * * * * * *
15867156 GAGTTTTGGCCCCAACCTTCGTAGGCATGATCCTTGTATTTTTGTTGGCACGCATAAAAATATTC
454 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * *
15867221 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTTAGACGC
519 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
15867286 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGATTTCTCA
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
15867351 AGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * *
15867416 CACACA-CCCC-CCGGCCCCCCGATCGTCGGAACTCCAATGCTGCCGGTCAGG---T------T-
714 CGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATG
* * *
15867469 CTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCAAGCATGTGC
779 CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
15867534 TGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
844 TGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
15867586 CTTAGACTGGAAATCAACTTCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
15867651 TGGCTAGAGGGGCAGGATACGCAAGCCGAGGATCGGTCGGGTCCCCCTTTACGTGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
15867716 TGCTACCGCAACCCTC-ACTCTGG-TCTGATCTAAGACTGGGAATGAACTCCGTA-ACCTAAGCC
131 TGCTGCCGCAACCCTCGA-TCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
15867778 GATCGACGAAACGAGTGGGCGGGCAGGCGGGCACTACGCCGACCAAAGAGACGGGATGCGCAAGC
194 AACCGACGAAACGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
15867843 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCATGTGCCAATGCCATT
255 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
*
15867908 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGGCAAGACGA
320 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
15867973 CTCGTTTTTTATTTCTCATGATTTTTGAAACTTTTTACGGGTCGGGATTTTTTAAAATTTTTTCG
385 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
** *
15868038 GAAGGAGTTTTGGCCCCAAACTTCATAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
450 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * *
15868103 ATTCAGCGAAATACTCGAAGTGTACCAGATTTTGTGACCATTTGGAAAAAGTGTCCCCATTTCAG
515 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
15868168 ACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
580 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
15868233 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAATGTCCAAGTACCAGCACCCATCGCACATCA
645 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
15868298 TGTGCGCACA-CCCCTCCCGGCCCCCCCGATC-ACTGAAACCCCAATACCGCCGGTTAGG-T-T-
710 TGTGCGCACACCCCCT-CCGG-CCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * *
15868358 --C--T--T-CGGTGATGGTGCCCCGGCGAAGAAAAATGCGACACCAACACATGCCCGAGCCCAG
772 CGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * *
15868416 CATGTGCTGCCGCAA-CCTGCGGTCCAGTCCGATATTAGACTGGGAATGAACTCCGCATG
837 CATGTGCTGCCGCAACCCT-C-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15868475 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * **
15868540 CGGCCAGAGGGGAAGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCACTACGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
15868605 TACTACCGCAACCCTC-AGTCCGATCCAATGTTAGACTGGGAATGAACTCCGTATG-CTAAGCCA
131 TGCTGCCGCAACCCTCGA-TCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15868668 ACCGACGAAACGAGCGGGCGGACGGGCGGGCGGGCACTATGTCGGCCAGAGAGACAGGATGCGCA
195 ACCGACGAAACGA-------G-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * * * *
15868733 AGTCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCATTCCAATGTC
252 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCC
* *
15868798 ATTTTTATGGCTTGTAAATTCTTACAATGGTCCCTTAA-CGCTTCACGTAAAGTTTCATGGCAAG
317 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC-CTTCACGTGAAGTTTCATGGCAAG
* *
15868862 ACGACTCGTTTTCAATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
381 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* *
15868927 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTTGTTGGCAAGCACG
446 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACA
* *
15868992 AAAAAACTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
510 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
15869057 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCCCTTTAAGGGGGTGT
575 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
15869122 GAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
640 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** * * *
15869186 CATCATGTGCGCACA-CCCC-CCGGTCCCCTCGATCACCGGAAACCCAATGCCGTCGATCAGGTT
705 CATCATGTGCGCACACCCCCTCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * * *
15869249 CT-C-C-A-G-T-----GATGGTGTCGCAACGAAGAAAAATGTGACACCAACACATGCCCGAGCC
769 CTCCGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* ** * * *
15869304 CAGCATGTGCTGCCGCAACCCTCGAACCATTCCGATCTTACACTGGGAATGAACTCCATAAG
834 CAGCATGTGCTGCCGCAACCCTCG-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15869366 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCG-GCGGGTGCCCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
15869430 CGACCAGAGGGGTGGGATACGCAAGCTGGGGATCGGTAGGGACCCCCTCTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * *
15869495 TGCTACCATAACCCTCGGTCCGG-TCTAAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGATCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
15869559 ACCGACGAAATGAGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
*
15869624 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCGAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
* * * * *
15869689 AGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGATGACTTGT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * *
15869754 TTTCTATTTTTCACAATTTTTAAAACTTTTTGCGGTTCGGGATTTTTGAAAATTTTTTCGGAAGG
390 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* * **
15869819 AGTTTTGACCCCAAACTTGGTAGACGTTATCCTTGTATTTTTGTTGGTGTGCACAAAAAAATTCA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
15869884 GCTAGAAACTCGAAGTGTACAAGATTTTGTGACCATATGAAAAAAGTGTCCCCATTTCAGACACT
520 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
15869949 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
585 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * * * *
15870014 GGTTTGTTGAGGGATAGCGGGCCAATATAAGGGCCATGTACCAGCACCCATTGCACATAATGTGC
650 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
15870079 GCACAACCCCC-CCGGCCCCCTGATCGCCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGACGAT
715 GCAC-ACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGAT
* * *
15870143 GCTCCGGCGATGGTGCCCCGACAAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAGCATGTG
778 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
** * * *
15870208 CTGCCTTAACCCTCGATCTGATCCGATCTTAGACTGGGAATGAACTCCGTACG
843 CTGCCGCAACCCTCG-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15870261 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
15870326 CAGCCAGAGGGGCGGGATGCGCAAGCCGCGGATCGGTCAGGTCCCCCTCTGCGTGCTGTCAATGC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * *
15870391 TGCTGCTACAATCCTC-AGTCTGG-TCTGATCTTATACTAGGAATGAACTCCGTATGCCTAAGCC
131 TGCTGCCGCAACCCTCGA-TCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
15870454 AACCGACGAAACGATCGGGCGGGCGGGCACTACGCCAGCTAGAGAGACGAGATACGCAAGCTGTG
194 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
15870519 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTA
* * * *
15870584 TGGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACAACTTG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* ** ** *
15870649 TTTTTTATTTTTCACGATTTTCCAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCGAAAG
389 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * *
15870714 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTTGTTGGCAAGCACGAAAAAACT
454 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATT
* *
15870779 CTGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
518 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
15870844 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
583 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
*
15870909 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGT
648 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * *
15870974 GCGCACACCCCCCTCCCCGACCCCCCCGATCATCGGAACCCCAATGTCGCTGGTCAGGTTCTCCG
713 GCGCACA-CCCCCT--CCG-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-
* * * *
15871039 GCGATGCTCCGACGATGCTGCCCCAACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
773 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
*
15871104 ATGTGCTG-CG--A--CTAC--CC--T-CGGTC-----C-----A-G---TCCG-AT-
838 ATGTGCTGCCGCAACCCT-CGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
15871136 CTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTACGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
15871201 CGGCCAGAGGGGCGGGATGCGCAATCCGAGGATCGG-CTAGGTCCCCCTCTGCATGCTCCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * *
15871265 CTGCTGCCGCAACCCTTGGTCCAG-TCAGATCTCAGACTGGGAATGAACTTCGTATACCTAAGCC
130 CTGCTGCCGCAACCCTCGATCCGGTTCA-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
15871329 AGCCGATGAAATGAGCGGACGAGCGGGCGGGCAGGC-ACTGCGCTGGCCAGAGAGACGGGATGCG
194 AACCGACGAAACGAGC-G--G-GCGGGCGGGCA--CTAC-GC-C-GGCCAGAGAGACGGGATGCG
*
15871393 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTACGTGCCAATG
250 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
* *
15871458 CCATTTTTATGGCTGGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAA
315 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* ** ***
15871523 GATGACTCGTTTTCTATTTTTCACGATTTTCCAAACTTTTTGTTGTTCGGGA-TTTTTAAAATTT
380 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * *
15871587 TTTCGGAAGGAGTTTTGGCCCCAAACTTAGTAGATGCGATCCTTGTATTTTT-TTAGCATGCACA
445 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * *
15871651 AAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCTT
510 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
15871716 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTAT
575 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * * *
15871781 GAGTTCTTGAGGTTTGATGAGGGATAGGGGG-CAATATGAGGGCCTAGTACTAGCACCCATTGCA
640 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** * **
15871845 CATCATGTGCGCAAACCCCCCTCCCCGGCCCCCTCGATCACCAGAACCCCAATGTCGCTAGTTAG
705 CATCATGTGCGCACA-CCCCCT--CCGGCCCCC-CGATCGTCGGAACCCCAATG-C-C--G-CCG
* * * *
15871910 GTTCTCCGACGATTCTCCGACGATTCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCA
761 G---T-C-A-GGTTCTCCG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
** *
15871975 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCCATCC-ATTCTTAGACTAGGAA
819 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGTCCGA-TCTTAGACTGGGAA
15872039 TGAACTCCGTATG
882 TGAACTCCGTATG
* * *
15872052 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * *** * * * * * * *
15872117 CATTTTCTA-TGGGGAAAGATGCACAAGCTGGGGATCGATCGAGT-CCCCTCTGCATGTTGCCAA
66 C---GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGA
* ** * *
15872180 TCCTGCTACCATAACCCTC-AGTTCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
128 TCCTGCTGCCGCAACCCTCGA-TCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * ** *
15872244 CCAATCGACGAAATGAGCGGGCGGGCGGGGGGACGGGCACTACGTTGGCCAGAGAGGCGGGATGC
192 CCAACCGACG-AA--A-CGAGCGGGC---GGG-CGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * * * * *
15872309 GCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTACGCACATTTTCATATTTCTGCATGCCAAA
249 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAAT
*
15872374 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCA
314 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * *
15872439 ATATGACTCGTTTTCTATTTTTCATGATTTTTGAAA-TTGTTTACGGTTTGGGATTTTGTAAAAT
379 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT-TTTACGGTTCGGGATTTTTTAAAAT
* *
15872503 TTTTTCAGAATGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
443 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
*
15872568 CAAAAAAATTCAGCTAAAAACTCGAACTGTACAAGA-TTTGTGACCATTTGAAAAACA-TGTCCC
508 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA-AGTGTCCC
* *
15872631 CATTTCAGAAACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
572 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
15872696 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGAACTAGCACCCATC
637 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * * *
15872761 GCACATCATGTGTGCACA-CCCC-CCGACCCCCCTGATCGTCGAAACACCAATGCCGTCGGTCAA
702 GCACATCATGTGCGCACACCCCCTCCGGCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAG
** * * * * *
15872824 GTTCTCCGACGATGCTCCAACGATGGTGCCTCGACGAAGAAAAATGAGCCTCCAGCACATGCTCG
766 GTTCTCCG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * *
15872889 AGCCCGGCATGTGCTGCCGTAA----C--CC--T-C-A-GTT---C---G---G---TCCG-AT-
830 AGCCCAGCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
15872929 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAGGAGCGTGCCGACGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
15872994 CGGCCAGAGGGGTGGGATGCGCAAGTCAGGGATCGGTCGGGTCCCCCTTTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * ** *
15873059 TGCTACTGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTTGTATGCTTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * *
15873124 CTGACGAAATGAATGGGCGGGCGGGCAGACGGGCACTACATCAGCCAAAGAGACGGGGTGCGCAA
196 CCGACGAAACG-A---GCGGGC-GG--G-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
15873189 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
* * * * *
15873254 TTTGTAT--C-TGTGAATTCATACAACGGTCCCTTAAGCCTTCGCGTGAAGTTTCATCGCAAGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
15873316 GACTCCTTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCAGGATTTTTTAAAATTTTTT
383 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * *
15873381 CGGAAGGAATTTTGGCCCCAAACTTGGTAGACATGATCCTTGCATTTTTTTTGGCATGCACAAAA
448 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
15873446 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
513 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTT
* * *
15873511 C-GACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGAGGGCGTGA
577 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
15873575 GTTCTCGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAGCACCTATCGTACA
642 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
15873640 TCATGTGCACACA-CCCC-CCGGCCCCCCGATCGCCGGAACACCAATGCCGCCGGTCAGGTTCTC
707 TCATGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * *
15873703 CGGCAATGCTCCGGCGATGGTGCCCCAACGAAGAAAAATTCGGAACCAGCACAT-CTCGCGCCCA
772 C-GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * *
15873767 GCATGTGCTGGCTGCAAACCCTCAGGTCTGGTTCGATCTTAGACTGGGAATCAACTCCGTAATG
836 GCATGTGCT-GCCGC-AACCCTC--GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT-ATG
* * * * *
15873831 CTTAGACCTGGGAAATG-ACTCCCTATGCCTAAGTCACCCCACGAAACCAACGTACGGGCGCTTC
1 CTTAGA-CTGGG-AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC-TC
* ** * * * * * * * *
15873895 AACCAACCAGAGGGGCGAGAT-CACAAGTCGGGGATCGGCCGCGTCTCTCTCTGTGTGCTGCCGA
63 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGA
**** *
15873959 TCCTTGCTGTTTTAACCCTC-AGCCTGGTTCAATCTTAGACTGGGGAATGAACTCCGTATGCCTA
128 TCC-TGCTGCCGCAACCCTCGATCC-GGTTCAATCTTAGACT-GGGAATGAACTCCGTATGCCTA
* * * * * * **
15874023 A-CCCACCGACGAAACGAAGCAGACGGGC---AAGTATGCCGGCCAGCAGAGATAGGATGCCGCA
190 AGCCAACCGACGAAACG-AGCGGGCGGGCGGGCACTACGCCGGCCAG-AGAGACGGGATG-CGCA
* * * *
15874084 AGCCATGGATCAGATAGGGTGGTAGGTGGGTTTAGGGCATATCTTTATATTTCTATGTGCCAATG
252 AGCCGTGGATC-GATAGGGTGGTAGGTGGGTTTA-GGCACATCTTCATATTTCTACGTGCCAATG
15874149 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
315 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * *
15874214 GACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTCAAATTT
380 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * * *
15874279 TTTCGGAAGGAGTTTTAGTCCCAAACTCGGTAGACATGATCCTTGTATTTTTCTTGGCATGCACA
445 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
15874344 AAAAAATTTAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
510 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
15874409 TTCAGACACTTTAATGGCTACTAGCAGCAAACATGT---A----AAATGCTCTTTAAGGGGGTGT
575 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
15874467 GAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATATAA-CGCCAAGTGCCAGCACCCACCGCA
640 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
15874531 CATCATGTGCGCACA-CCCC-CCGGCCCCCTGATCGTCGGAACCCCAATGCCGCCGGTTAGGTTC
705 CATCATGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* * *
15874594 TCAGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCCAGCC
770 TC-CGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
*
15874659 CAGCATGTGCTGCCACAA-CC-C-T-C-G---G---TT---C---------A-TCCG-AT-
834 CAGCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15874694 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
15874759 CGACCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTTCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * ** *
15874824 TGCTGCCGCAACCCT-TAGT-CTGATCTGATCTTAGATTGGGAATGAACTCTATATGTCTAAGCC
131 TGCTGCCGCAACCCTCGA-TCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * ** * * *
15874887 AACCGACAAAATGAGTGGACGGACGGGCGGACACTATACCGGCCAGACAGACAGGATGTGCAAGC
194 AACCGACGAAACGA---G-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * * *
15874952 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCATATCTTCATATTTCTACCTACCAATGCCATT
255 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
15875017 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA-GA
320 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG-
* ** * *
15875081 ACTCATTTTCTATTTTTCATAATTTTTGAAACCTTTTACGATTCGGGATTTTTTAAAATTTTTTC
384 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* *
15875146 GGAA-AAGGTTTTGGCCCCAAACTTCGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
449 GGAAGGA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
15875210 CAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTG
513 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15875275 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAACTCAAATGCTCTTTAAGGGGGTGTGAG
578 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
15875340 TTCTCGAGGTCTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACAT
643 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
15875405 CATGTGCACACACCCCCTCCGGCCCCCCGATCGCCGGAACCCCAATGCTGCCGGTCAGGTTCTCC
708 CATGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * * *
15875470 GGTGATGCTCCGACGATGGTGCCCCAACAAAGAAAAATGCGGAACCAGCACATGCTCGAGCCCAG
773 -GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * *
15875535 CATGTGCTGCCGTAACCCTCGGTCCAGTTCGATCTTAGACTGGGAATCAACTCCGTATG
837 CATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15875594 CTTAGA-TTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * * * *
15875658 CAACTAGAGGGGCGAGATGCGCAAGTCGGGGACCGGTCGGGTCTCTCTCTGTGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
15875723 TGCTGTCGCAACCCTCGGTCCGGTTCAATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
15875788 CCGACGAAACGAGCGGGCGGGCGGGCGGGCAGTATGCCGGCCAGAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
15875853 TGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTTATATTTCTATGTGCCAATGCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
15875918 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* ** * *
15875983 CGTTTTCTATTTTTCACAATTTTTGAAACTTTTCGCAGTTCGAGATTTTTTAAAATTTTTTCGGA
387 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * *
15876048 AGGAGTTTTGGCCCCAAACTCGGTAGACATGATCCTTGTATTTTTCTTGGCATGCACAAAAAAAT
452 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
15876113 TCAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGAC
517 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
15876177 ACTTTAAATGGCTACTGGCAGCAAAAACC-ATAAAAACTCAAAATGCT-TTTAAGGGGGTGTGAG
582 ACTTT-AATGGCTACTGGCAGC--AAACCTGTAAAATCTC-AAATGCTCTTTAAGGGGGTGTGAG
*
15876240 TT-TCGAGG-TT-ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAGTCACAC-
643 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-TCGCACA
* * * * *
15876301 TCATGTGCGCATACCCTCTCCGGCGCCCCCGATC-ACGGAACCGCCAATG-C-ACAGTCAGGTTC
707 TCATGTGCGCACACCCCCTCCGGC-CCCCCGATCGTCGGAACC-CCAATGCCGCCGGTCAGGTTC
* ** * * * *
15876363 TCCGTGATGCTCCGGCGATGGTGCTTCAACGAAGAAAAATGCGGGACGAGCACATGCCCGAGCCT
770 TCCGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* *
15876428 AGCATGTGC-G--GCAACCCTCGTCCGGTCAGATCTTAGACTGGGAATGAACTTCG--TG
835 AGCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
15876483 CTGAGACTAATGAAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCA
1 CTTAGACT--GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * *
15876548 GCCGGCCAAAGGGGTGGGATCCGCAAGCCGAGGG-TC-ATCAGGTCCCTCTCTACGTGCTGTCGA
64 GCCGGCCAGAGGGGCGGGATGCGCAAGCCG-GGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGA
* * * * * ** * * *
15876611 TCTTGCTGCAGCAACCCTTGGTCTGGTTTGATCTTAGACTAGGAATGAACTTCGTATGCCTATGC
128 TCCTGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
15876676 CAATCGACAAAATGAGCAGGCGGGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCG
193 CAACCGACGAAA--CG-A-GCGGGCGGGC----GGGCACTACGCCGGCCAGAGAGACGGGATGCG
* *
15876741 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTACATGCCAATG
250 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
* *
15876806 CCATTTTTATGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAA
315 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * *
15876871 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTAGCAGTTCGAGATTTTTTAAATTT
380 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA-CGGTTCGGGATTTTTTAAAATT
* **
15876935 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGTGC
444 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
15877000 AAAAAACTTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTCCCCA
509 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
15877065 TTTTAGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
574 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
*
15877130 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGC
639 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
15877195 ACATCATGTGCGCACACCCCCCTCCGACCCCCCGATCGTCGGAACCCCAATGTCGTCAGTCAGGT
704 ACATCATGTGCGCACA-CCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* * * **
15877260 TCCCCGATGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAAT-CGGCACCAGCACATGCCCGAG
768 TCTCCG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
** * * * *
15877324 CCCAGCATGTGCTATCGTAACCCTCGGTCTGATCCG-TCTTAGACTGGGAATGAACTCTGTATG
832 CCCAGCATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* ** * *
15877387 CTTAGACTGAGAATGAACTTTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
15877452 CGGCCAGAGAGGCGGGATGCGCGAGCCGGGGATCAGGTCGGGTCCCCCTCTGCGTGCTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GGTCGGGTCCCCCTCTGCGTGCTGCCGATC
** * **
15877517 CTATTGCCGCAACCCTCGGTCTAG-TCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGATCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * ** * *
15877581 AACCGGTGAAACAAGCGGGCGGGCAGGCGGGCGGGTACTACATCGGCCAAAGAGACGGGATGCAC
194 AACCGACGAAACGAGCGGGC--G--GGCGGGC----ACTACGCCGGCCAGAGAGACGGGATGCGC
**
15877646 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGC
251 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGC
** ** ** *
15877711 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTGCAGGGTT-A-GTCCA-TTTGCA--GAAA
316 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT-CATGGCAA
* ** * * ** * ** ** * *
15877771 GATTAAGAC-CAAGAAATTC-A-ATTT--CGGTTTTTTCAA-GTTCAACCTTTTTGGGA---CTT
380 G---ACGACTC--G-TTTTCTATTTTTCACGATTTTTGAAACTTTTTA-CGGTTCGGGATTTTTT
** ** ** * *** * *
15877827 AAAATAATACCGTGTAAAATAAATTCTTGAGCAATGAGA-TT--TA-A-GTGTTTCCTATGCTCA
438 AAAATTTTTTCG-G---AAGGAGTT-TTG-GC-CCCAAACTTGGTAGACGTG-ATCCT-TG-T-A
*** * * * * *
15877887 TCTAAAGTAT--TA-G-AAAATATCAAAATATCATC-AATATA-TAC-ACA--G--CAAAATTGT
492 T-TTTTGT-TGGCATGCACAA-A--AAAAT-TCAGCTAA-AAACT-CGA-AGTGTACAAGATT-T
*** * * * * * * * * * *
15877941 T-T-ATGTTTGCTGAAAATACTATCCATCCAATGCTGAAATATTTGAAAGGCATTGCATAGACCG
547 TGTGACCATT--TGAAAAAAGTGTCC--CCATTTCAGACA-CTTT-AATGGC--TAC-T-G---G
* *** *** * ** * *
15878004 AAAGGCATAACAGTCCATTGGTAATGGCCTGCTTGTGCACTAAAAGCAGTAAGGGGTTTAAAAGT
599 -CA-GC--AA-A--CC--T-GTAA-AATCT-CAAATGCTCT-TTA--AG---GGGGTGT--GAGT
** * *** * ** ** **
15878069 T-TC-A--TTTAGCATGATTTGCCAAAAACCTGACTTACAATCA-AATTTAGAAAAGTATTTAGC
644 TCTCGAGGTTT-G-ATGA---G--GGATAGGGGGC---CAAT-ATAA--GGGCCAAGTA-CCAGC
**** * * * *** * ** * ******* * * ** *** *
15878129 ATTTTTTGCTAAATTAAT-T-AAAACA-TCTTTTCGAGGGATAAAATAGCCATCAAAAACAA-GA
695 ACCCATCGC-ACA-TCATGTGCGCACACCCCCTCCG-GCCCCCCGATCGTC-GGAACCCCAATGC
**** * ** * ** ** ** * * * *** ** *
15878190 TTTTGGTTTAATTTCT-TGTAATTAATAACCATACG-GGGTTTACCTCGTTTAATCTCAGAATG-
756 CGCCGG-TCAGGTTCTCCGCGA-TGCT--CC-GGCGATGG--TGCCCCGACGAA--GAAAAATGC
* * * * * * * * * * * ** * *
15878252 GTTTCTTACCA-AAAATG-CTG-GACTAGAATGTGGACTG--G-TA--GTAGGTTCTATCAGACC
812 G--GC--ACCAGCACATGCCCGAGCCCAGCATGT-G-CTGCCGCAACCCT-CGTCCGGTCCGATC
* * * *** *
15878309 TTTGTC-GAGCAACTTCCCTCACCATGGGATG
870 TTAGACTG-GGAA-TGAACT--CC---GTATG
* * *** * * * * * ** * * ** * *
15878340 AATTAAGTTCTCAAAAT-TAC-CCTGTTTACCTTGAGTTAAAACTCAAAACTGTTCATGC-TGCA
1 -CTT-AG-ACTGGGAATGAACTCC-GTATGCC-TAAGTCAACCCACGAAAC-GAGCGTGCGGGC-
** *** ******* * * ** ** * * ** ** * *** * *
15878402 AATC--CCAGTATAGAACTATATGATACTCTTGGATGTAGAATACACTATGTTCAAACACAG-GT
59 GCTCAGCC-GGCCAGAGGGGCGGGATGCGC-AAGCCG-GGGAT-CGGTCGGGTCCCCCTCTGCGT
* * * * * ** ** * * * * ** * * ** * *
15878464 AACAG--AATACTGTTTGAAGCAAAAAGCTGCAAAACAGATAAAATC-CAAACTTTCGTATAAAC
120 -GCTGCCGATCCTG-CTGCCGC--AACCCT-C-GATCCGGTTCAATCTTAGAC-TGGGAATGAAC
*** * ****** * **** ***** * ***
15878526 AATGTA---CAAAGATTTTGGA--AAATGAATTTGAATTTGGTTGCAACAAAC-CATCTTTTTCA
178 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG--GC-AC-TACGC--C--GGCCA
* * ** *** **** * *** ** *** **** * * *
15878585 AAGAAACCTCG-T-TTTAAG--AAAAAAC-A-AAAATATTTTTTGGAAAAAATGG-AAACCTACA
235 GAGAGA-CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG-GTTTA-GGCACATCTTCA
* *** * ** ** * * ** *** * * *** * * *
15878643 -ACTTT-TAAACCTAAAAAAGGTAAATTTGTTG-TTAAAAAGAAGAAAAAACCATCTTCTAAAAC
297 TA-TTTCT--ACGTGCCAATGCCATTTTTATGGCTTGTAAA-TTCATACAATGGTC-CCTTAAGC
* * * * * * * * *
15878705 AACTT---GTAAATGTTTTCTTTGTGATCAAGAAG-GTCACTATGCAAACGCTTGTCCTAACAAA
357 --CTTCACGTGAA-G-TTTC-ATG-G--CAAGACGACTC-GTTTTC-TA---TT-T--T-TC--A
* **** * *** * * ** * *
15878766 GGAAAAAGTGGGAAGAAAATGATCAAAAAACTTGAT-GAAAGTTTTCTTCAAATTTGTTTTGCTG
403 CG----A-T-TTTTGAAACT--T---TTTAC-GGTTCGGGA-TTTT-TT-AAAATT-TTTT-CGG
* *** * * * ** ****
15878830 AA-GAATTATCTGATG-AAGAAATTTGTTATGAAG-GA-CCACCGT-TTTCAAAACCCT-GCTAA
451 AAGGAGTT-T-TG--GCCCCAAACTTGGTA-GACGTGATCC-TTGTATTT----TTGTTGGC--A
* ** * * ** ** * * * * * * * * *
15878889 TGCTATAATCGGAGGAATCCA-ATCCAATTTAGCAGCAG-GCATAG-TTTTATTTA-AAGTTAAA
504 TGC-ACAA----AAAAATTCAGCTAAAAACTCGAAG-TGTACA-AGATTTT-GTGACCATTTGAA
* * ** * * * * ** * ** * *
15878950 CCAAACTATTTTATTTCTATTTTTTATGAAAACATTGAAAAATGTTTA-TGTCTTCGAA--T-CA
561 --AAA--A--GTGTCCCCA--TTTCA-G-ACAC-TT---TAATGGCTACTGGCAGCAAACCTGTA
* * * *** * * **** * * *
15879011 AAATACTC-AATTCTGATTTCGAATCGACAT-TGCATGATCTTTCAATCAACTGGTCAGCGGTTT
612 AAAT-CTCAAATGCT-CTTT--AA-GGGGGTGTG-A-G-T-TCTCGA-GGTTTGATGAG-GG-AT
***** *** * * * * * **
15879074 ATGAATTTACAA-AT-ACTACTAA-TACCTCTATCAAACCGATAG-ATCCA-AATGTTATTG-A-
665 A-G-GGGGCCAATATAAGGGCCAAGTA-C-C-AGC--ACCCATCGCA--CATCATG-T-GCGCAC
***** ** **** * *** * ** * * *
15879132 AATTTTTAAACCAAACTCTTTTGAT--TCAGAA-ATTAA-ACC-TAGATTA-GTAAATCT-TGCA
719 ACCCCCT---CC-GGC-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT---TCTCCGC-
* * * * * * ** * * ** *
15879190 GATTTATCAATCCCAAAAG-GATGGTGTCTCGAAGATCTTACTATTACTTCTGAAAAACAG-A-A
775 GA--T-GC--T-CC---GGCGATGGTGCCCCGACGA----A-GAAAAATGC-G-GCACCAGCACA
* * * *** * * * * ** *** * *
15879252 AGTTCCAAGTTTAGAATTTTTCAGCCATAAAAAATGGT---GTACAACGAT-TTCACATCT---A
824 TG-CCCGAGCCCAGCA-TGTGCTGCC-GCAACCCTCGTCCGGT-C--CGATCTT-AGA-CTGGGA
* * * * *
15879310 TTTAGC-CCTGGAGTT
881 ATGAACTCC-GTA-TG
* ** * * * ** * *** * *
15879325 CTTTGTTA-TTCGAACAGATAAC-CAAGCA-GTCAAAAATTTTCTCCA--AAACAGAAAGCTTTC
1 CTTAG--ACTGGGAA-TG--AACTC-CGTATG-CCTAAGTCAAC-CCACGAAAC-G--AGCGTGC
* **** * * **** * * * *
15879385 TGATAATC--CCAGGCGAATTAGGTGGTACAATTTTCTTTCTTCTTATCATTTTCAGGTAGAGTT
55 GGGCGCTCAGCC-GGC-CA-GAGG-GG--C----GGGATGC-GC--A--A---GCCGG--G-G--
** * * ** * * * * * * ** *
15879448 CATC-AACGGAGACAACAATCTCCTTGCAGAC-TTCCTAAG-TAGACCCCCTCTGGCCCCTCCTA
97 -ATCGGTCGG-GTC-CCCCTCTGCGTGCTGCCGATCCT--GCT-G----CCGC--AACCCT-CGA
** * ** * ** ** *
15879510 TCGTCGGAACCCCAATGC-TA-TC-GGTCAGGTTCTCCGGTGATG-CTCCGACAATGGTGCCTCG
149 TC--CGG---TTCAAT-CTTAGACTGGGAATGAACTCC-GT-ATGCCTAAGCCAA------C-CG
* ** *** * ** * * * * * * * *
15879571 ACGAAGAAGA-ATGAAAGACCAGCAC-ATGCCCGAGCC-CAG-CATGTGCTGCCGTAA-CCCTCG
199 ACGAA-ACGAGCGGGCGGGCGGGCACTACG-CCG-GCCAGAGAGACGGGATG-CGCAAGCCGT-G
** * ** * * * * ** ** **
15879631 G-TCCAGATCCGATCTTTGACTGGG--AATG-A-A-CTTCATATGCTTAGAC-TGGGAATGAGAC
259 GAT-C-GATAGGGTGGTAG-GTGGGTTTAGGCACATCTTCATAT--TTCTACGTGCCAATGCCA-
*** * * * ** * * * * ** *
15879689 TCCCATATGCCTAAGTCAAGCCGATGA-AATGACAGGCGGGCGCTCAA-CAC-GCA-GAGGGCGA
318 T-TTTTATGGCT-TGTAAATTC-AT-ACAATG---GTC---C-CTTAAGC-CTTCACG-TGAAGT
* ** * * * * * ** ** **
15879750 TT-A-CGC-AG-CGGGCATCGTCGGTCTCCCTCTCTTGCACCTAATCCTGCACGCCATTT-CAGT
370 TTCATGGCAAGAC--G-A-C-TC-GT-TTTCTATTTTTCA-CGATTTTTG-AAACTTTTTAC-G-
* * *** ** * * * ** * ** *
15879810 GGTC-TGATCTAGATGGGAGAACTATTATGCTAGCCAACGA-TAAATGAGCGGCCAGGCTAGGCA
424 GTTCGGGAT-T---TTTTA-AA--ATT-TTTTCG-GAAGGAGT-TTTG-GC-CCCAAACTTGG--
* * ** *** * * * * *** *
15879873 TACG-CGGTCAGATCGC-GGGA--TGCGCAAGCGTGGATCGATAGGGTGGT-AGGTGGGTTAGGC
475 TA-GAC-GT--GATC-CTTGTATTTTTGTTGGCATGCA-CAAAAAAAT--TCA-----GCTA---
* * * * * * * ****
15879933 ACATCTTC-ATATTTCTACATGCCATGCTATTTTTATGGCTTGTAAATTCATCAA-TGGT-CCC-
524 AAAAC-TCGA-A-GTGTACAAG--AT--T-TTGTGACCATTTG-AAA---A--AAGT-GTCCCCA
* * * * * * * ** * * * **
15879994 TTTAAG-C-CTTCACTGCGAGTTTCATGGCAAG-ACGACTCATTTTCTATTTTCATGATTTTAAA
574 TTTCAGACACTTTAAT--G-GCTAC-TGGC-AGCA-AAC-C--TGTAAAATCTCA-AATGCT---
* * ** * * * ** ** *** * **
15880056 CTTTTTACGGTTTGGGATTTTTTAAAATTT--TTTTGGA-A---GG--AGT-T-TTGGCC-----
626 C-TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * ** ****** *** **** ** *** *
15880106 CCA--A-ACTTGGTAGA-C--GTGATC-CTTTTATTTTTG-TTGGC-AT--TCACAA-AAAAATT
690 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATG
** **** *** * ** * * **** *
15880159 AAG-C--T-AAAAACTCAAAG-TG-TAC-AAGATTTTGTGACCATTTGAA-AAAAGTGTC--C-C
755 CCGCCGGTCAGGTTCTCCGCGATGCTCCGGCGA--TGGTGCCCCGACGAAGAAAAATG-CGGCAC
*** ** ** * * * **** *
15880213 CATTTCA--AAC-A-CTTTA--ATGGCTACTGGCAGCAAACCT-GTAAAATCTCAAATGCTCTTT
817 CAGCACATGCCCGAGC-CCAGCAT-G-TGCT-GCCGCAACCCTCGTCCGGTC-C----GATC-TT
** ** ***
15880271 A-AGGGGGTGTGGGTTCTCG-A-G
872 AGACTGGGAATGAACTC-CGTATG
* * * ** * * *
15880292 GTTTGA-TGAGGGATAGGGGGC-CAACATAAGGGCC-AAGTACCAGCACCCATCGAACATCATGT
1 CTTAGACT--GGGA-A-TGAACTC--CGT-A-TGCCTAAGT--CA--ACCCA-CGAA-A-C--GA
** *** * * ** * ** * ** * ** *
15880354 GCGCACACCCCCCTCCGGCCCCCCCGATCGTC-GGAACCCCAATGCC---G-TCGGTTAGGT-TC
49 GCGTGC-GGGCGCT-CAGCCGGCCAGAGGGGCGGGATGCGCAA-GCCGGGGATCGGTCGGGTCCC
* * * * ***** * ** * ** * *
15880413 CC-CGGCGATGCT-CCGA-CGATGGTGCCTCGGTGAA-GAAAAATACGGCACAAGCACATGCCCG
111 CCTCTGCG-TGCTGCCGATC-CTGCTG-C-C-G-CAACCCTCGATCCGGTTCAATCTTA-GACTG
* ** * * ** * * ** * * * *** * *
15880474 AGCCT-AGCAT--GTGCTGTCGC-AA-CCCTCGGTCTGATCCGATCTTAGACAGGGAATGAACTC
169 GGAATGAAC-TCCGT-ATG-C-CTAAGCCAACCGAC-GAAACGAGC--GGGC-GGGCGGGCACTA
*** * * ** * * ** * * *
15880534 CGTATGCTTAGACTAAGAATGAACT-CTGCATGCCTAAGTCAACCCACGAAATGAGCGT-GCA-G
226 CGCCGGC-CAGA--GAGACGGGA-TGC-GCAAGCC---GTGGA---TCG--AT-AGGGTGGTAGG
* * * ** * **** ** * *** ** * *
15880596 -GCGCTCA-GC-CGGC-T-AGAGGGGTGGGATGCACGA-GCCGGGGATCGGTCGGGTCCCCCTCT
277 TGGGTTTAGGCACATCTTCATATTTCTACG-TGC-CAATGCC----ATTTTTATGG----CTTGT
** * * * * ** * ** *
15880655 ACGTGC-TACCGATCCTGCTGCCACAACCCTTCA-GTCCAGTCTGATCTTAGACTGGGAATGA--
332 AAATTCATA-C-A--ATGGTCCCTTAAGCCTTCACGTGAAGT-T--TC----A-TGGCAA-GACG
** *** ***** ***** ** **
15880716 ACTTCGTATGCCTA--AGCCAACCGATGAAACAAACGGGCGGACAGACGGGCGGGTACTACATCG
384 AC-TCGT-TTTCTATTTTTC-A-CGATTTTTGAAAC-TTTTTAC-G--GTTCGGG-A-T---TTT
*** *** ** *** ** * *** **
15880779 GCCAAA--TAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA-CATC
436 TTAAAATTTTTTC-GGA---AGGAGTTTTGGCCCCA-AACTTGGTA-G-ACG--T--G-ATC--C
* * * ***** * * ** *
15880841 TTCATATTTTTATGTGCCAATGC-CATTTTTATGGCTTG-TAAATTCATAC-AA-TGGTCCCTTA
487 TT-GTATTTTTGT-TGGC-ATGCACAAAAAAAT-TC-AGCTAAAAAC-T-CGAAGT-GT-AC--A
* ** * *** * * * ** * *
15880902 AGCCTTCACGTGA--AGTTTCATGGCAAGACG-ACTCATTTTCTATTTTTCACGATTT-TTGAAA
541 AG-ATT-TTGTGACCA-TTTGA-AAAAAG-TGTCCCCA-TTTC-A---GACAC--TTTAATG--G
** *** *** * * * *
15880963 CTTTTTGTGGTTCGAGATTTTTTAAAATTTTTTCGGAAA-GAGT-TTTGGCCCCAAACCTGGTAG
592 C-TACTG-GCAGC-A-AACCTGTAAAA---TCTC--AAATG-CTCTTT-------AA---GG-GG
** * * ** * * * **** * * * *
15881026 ACGTGA-TCCTTGTATTTTTGTTG-GCTTGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
636 GTGTGAGTTCTCG-AGGTTTGATGAG---G-----GATAGGGGGC-CAATA-T--AAG-G-GCCA
* * *** * * * **** * **
15881089 GATTTTGTGACTATTTTGAAAAAAGT-G-TCTTCAT-TTCAGACACTTTAATGGCTACTGG-CAG
686 -A----GT-ACCA----GCACCCA-TCGCACATCATGTGC-G-CAC---ACCCCCT-CCGGCCCC
** * ** * * ** ** * * * * **
15881150 CAAACCTGT-AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-TGAGGTTTGATGAGG-GA
734 CCGATC-GTCGGAA-CCCCAATGC-C-----GCCGGTCAG-GTTCTCCG-CG-ATGCTCCGGCGA
* * * * * * * * * *
15881212 TAGG-G----GGCCAA-TATAA-G-GGC-CAAGTACCA-GCACCCATCGCA-CATCATG-TG-CG
788 T-GGTGCCCCGACGAAGAAAAATGCGGCACCAGCA-CATGC-CCGAGCCCAGCAT-GTGCTGCCG
* * * * * ** * ** *
15881264 CACACCC-C-CCCGATCGCCAGAACCCTAATGCCATCGGTTAGGTTCTCTGGCGATGGTG
849 CA-ACCCTCGTCCGGT--CC-G-A-TCTTA-GAC-T-GGGAATGAACTC---CG-T-ATG
** * * * * ** * ** * ***
15881322 CTCCGAC-GAAGAAAAATGTGACCCCAGCACATGCCCGAGCCCAGCATCTGCTGCCACAACCCTC
1 CTTAGACTG--G--GAATG-AACTCC-G--TATGCCTAAG-TCA--A-C--CCACGA-AACGAGC
* * * * ** **** * * ** * *
15881386 GGTCCGGTCCGATCTTAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCACGAAACGAG-C
51 -GTGCGG-GCG--CTCAG-CCGGCCA-GAGGGGCGGGATG-C---G-CAAGCCGGGGATCG-GTC
** ** * * ** * ** ** * * * * *
15881449 ATGTGGGCACTCAGTCGACCAGAGGGAT-GGGATG-CGCAAGCCAGGGATCGCTCGGGTCTTC-C
104 GGGT-CCCCCTCTG-CGTGCTG-CCGATCCTGCTGCCGCAA-CC----CTCGATCCGG--TTCAA
* * * ** * * ** * *** * ** ** *
15881511 TCTGCATACTGCTG-ATGCTGCTGTCGCAACCCTCAATCTGGTCTGATC-TTA-GATTGGGAATG
159 TCT-TAGACTG-GGAATG-AACT-CCGTATGCCT-AAGC-CAACCGA-CGAAACGAGCGGG--CG
** * * ** * * *
15881573 AACTCCGTATGC-CTAAGCCAACCGACGGAACGAGCAGGTGGGTGGGCGGGCAGGCACTACGTCG
215 ---GGCG--GGCACTACGCCGGCC-A--G-A-GAG-ACG-GGAT--GC--GCAAG--C--CGT-G
** * *
15881637 GCCAAAGAGACGGGATGGGCAAGCCGTGGATGGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
259 G--ATCGATA-GGG-T-GG-TA-----GG-----------------TGGGTTTAGGCACATCTTC
* * * * *
15881702 ATATTTCTGCGTGCCAATGCCATTTTCATGGCTTGTAAATTAATGCAATGGTCCTTTAAGCCTTC
296 ATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * **
15881767 ACGTGAAGTTTCATGGCAAGATGACTCATTTT-TATTTTTCACAATTTTTGAAACTTTTTGTGGT
361 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGT
*** *
15881831 TTAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGT
426 TCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * * *
15881896 ACTTTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAAGTCGAAGTGTATAATATTTTGTGACTA
491 A-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
15881960 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
555 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * *
15882025 AATGCTCCTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCC
620 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
15882090 AAGTACCAGCACCCATCTCACATCATGTGCGCACA-CCCC-CCGGCCCCCCCGATCATTGGAACC
685 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCCGG-CCCCCCGATCGTCGGAACC
* * **
15882153 CCAATTCTGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATGCG
749 CCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCG
* *
15882218 GCACCAGCACACGCCCGAGCCCAGCATGTGCTGCCGTAACCCT--T---G---G-TC-----C--
813 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTG
15882267 GG--T---CT--G-AT-
878 GGAATGAACTCCGTATG
* * * *
15882275 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCATGAAATGAGCGTGCGGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * ***
15882340 CGGCCAGAGGGGCGGGATGCACAAGCTTGGGATCGGTCGGGTCCCCCTTTGCGTGGTATTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * * *
15882405 TACTGTCGCAACCCTC-AGTCCGATCCGATCTTAGATTGGGAATGAACTCTGTATGCCTAAACCA
131 TGCTGCCGCAACCCTCGA-TCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
15882469 ACCGACGAAATGAGTGGGAGGGCGGGCGGGCAGGCACTACACCGTCTAGAGAGACGGGATGCACA
195 ACCGACG-AA--A---CGA--GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
15882534 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTACATGCCAATGCC
252 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCC
* *
15882599 ATTTTTATGCCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
317 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
15882664 CGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAA-TTTT
382 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
*
15882728 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAA
447 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * *
15882793 AAAATTCAGCTAAAAACTCAAAGTGTATAAGA-TTTGTCACCATTTGAAAGAAGTGTCCCCATTT
512 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
15882857 GAGGCACTTTAGTGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
577 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
15882922 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACA
642 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
15882987 TCATGTGTGCACA-CCCC-CCGGCCCCCCCGATCGTCGGAACCCAAATGCCGCCGGTCAGG-T-T
707 TCATGTGCGCACACCCCCTCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* ** * *
15883048 ---C--T-CT--AGCGATGGTGCCCCGGTGAAGAAAAATGCGACACCAGCAAATGCCCGAGCCCA
771 CCGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* ** * *
15883105 TCATGTGCTATCGTAA----CG--C--T-CG--GTT---C---G---G---TCCG-AT-
836 GCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
15883139 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
15883204 CTGCCAGAGGGACGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTTCCGCGTGCTACTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
15883269 TGGTGCCACAACCCTC-AGTCTGG-TCTGATCTTAGACTGCGAATAAACTCCGTATGCCTAAGCC
131 TGCTGCCGCAACCCTCGA-TCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
15883332 AACCGATGAAACGAGTGGGCGGGCGGGCGCTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTG
194 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
15883397 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGA-ATTCCAATGCCATTTTT
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-ACGTGCCAATGCCATTTTT
*
15883461 ATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
323 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* ** * * **
15883526 GTTTTTGTATTTTTCACGATTTTCAAAACTTTTTTCGGTTCGAGATTTTTTAAAATTTTTTTAGA
388 G-TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* *
15883591 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAAA
452 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-CAAAAAAA
*
15883656 TTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
516 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* **
15883721 CACATTAATGGCTACTACCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTC
581 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
15883785 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCACACATCAT
646 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
15883850 GTGTGCACACCCCC-CCGACCCCCCCGATCG-CTGGAACCTCAATGCCGCCGGTCAGGTTCT-C-
711 GTGCGCACACCCCCTCCG-GCCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * *
15883911 CGA--------C-----T---------AAGAAAAATGTGGCAGCAACACATGCCCGAGCCCAGCA
774 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * * * *
15883954 TGTGTTACCACAACCCTTGGTCCGGTTCGAGCTTAGATTGGGAATGAACTTCGTATG
839 TGTGCTGCCGCAACCC-TCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
15884011 CTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * * *
15884076 CGACCAAAGGGGCAGGATGCATAAGCTGGGGATTGGTCGGGTCCCCCTCTGCGTGCCGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
15884141 TGTTGCAGCAACCCTCGCTCCGATCCAATCTAAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* ** * **
15884206 CCGATGAAACGATTGGGCGGGCGGGCACTACGTCGGCCAGAGAGGTGGGATGCGCAAGCCGTGGA
196 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
*
15884271 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTAATG
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
* * * *
15884336 GCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACATGAAGTTTCATGGAAAGATGACTCGTT
326 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * *** * *
15884401 TTATATTTTTCATGATTTCCAAAACTTTTTACGGTTTGGCATTTTTTAAAATTTTTTCGGAAGGA
391 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
** * *
15884466 GTTTTCACCCCAAACTTTGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
456 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
*
15884531 CTAAAAACTCGACGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
521 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* **
15884596 TAATGGCTACTGGCAGCAAACCTGTTAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTAGCGAG
586 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
15884661 GTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTGCCAGCAACCATCGCACATCATGTGCG
651 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * *
15884725 CACACCCCCT-CGACCCCCTCTATCGTCAGAACCCCAATGCCG-C---CA-G---TCAG-G-T--
716 CACACCCCCTCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGC
** * *
15884777 T----C--T--T----CGACGAAGAAAAATGTTGCAGCAGCACATGCCCGAGCCCAGCATGTGTT
780 TCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * *
15884830 ACCACAACCCTCGGTCCCGTCCGATCTTAGATTGGGAATGAACTCCGTATG
845 GCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15884881 CTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * *
15884946 CAGCTA-AGGGACGGGATGCGCAAGCTGGGGATTGGCCGGGTCCCCCTCTACGTGCCGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * ** * *
15885010 TGTTGTAGGAACCCTCGATCCAATCCAATCTAAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
15885075 CTGATGAAACGAGTGGGCGGGCGGGAGGGCACTACGTCGCCCAGAGAGGCGGGATGTGCAAGCCG
196 CCGACGAAACGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
15885140 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
* *
15885205 TATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * * **
15885270 CATTTTTTATTTTTCATGATTTTTGAAACTTTTTGCTGTTCGGGATTTTTTAAAATTTTTTCTTA
387 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
** * * * *
15885335 AGGAGTTTTCACCCCAAACTTCGAAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
452 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
15885400 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAC
517 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
15885465 ACTTTAATGGCTACTGGCAGTAAACCTATAAAATCTCAAATGCTCTTTAA-GGGGTATGAGTTCT
582 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
15885529 CGAGGCTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTGCCAGCACCCATTGCACATCATG
647 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
15885594 TGCGCACA-CCCC-CCGGCTCCCCCGATCGCCAGAACCCGAGTGCCGCCGGTCAGGTTCTCCAGT
712 TGCGCACACCCCCTCCGGC-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GC
* * *
15885657 GATGCTCCGGTGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCAT
775 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * *
15885722 GTGCTGCCGTAACCCTCGGTCTGTTCCGATCATAGACTGGGAATGAACTCCGTATC
840 GTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15885778 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
15885843 CGGCCAGAGGGGCGGGATGCGCAAGACGGGGATCAGTCGGGTCCCCACT-T-CATGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC-CTCTGCGTGCTGCCGATC
* * * * * * * **
15885906 TTGCTGTCACAACCCTTGGTTCGG-TCTAATCTTCGACTGGGAATGAACTCCGTATATCTAAGCC
130 CTGCTGCCGCAACCCTCGATCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
15885970 AACCGACGAAACGAGTGGGCGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGATGGGAT
194 AACCGACG-AA--A-----CGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * *
15886035 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATTTTTTTGCGTGCCA
247 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCA
*
15886100 ATGCCATTTTTATGGCTTGTAAATTTATACAATGG-CCCTTTAAGCCTTCACGTGAAGTTTCATG
312 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC-TTAAGCCTTCACGTGAAGTTTCATG
* * * **
15886164 GCAAGACGACTCGTTTTTTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAA
376 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * * *
15886229 ATTTTTTCAGTAA-GAGTTTTGGCCCCAAACCTGGTAAACGTGATCCTTGTATTTTTTTTAGCAT
441 ATTTTTTC-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
15886293 GCAAAAAAAAATTCAGCTAGAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
505 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
15886358 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC--T---A--TAAAAT-CTC---AAGGG
570 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
15886412 GGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCA
635 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * ** ** *
15886477 TCACACATCATGTGCACACACCCCC-CCGACCCCCCCGATCGTCGGAACGTCAATGCCGTTGGTT
700 TCGCACATCATGTGCGCACACCCCCTCCG-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTC
* * * * *
15886541 AGGTTCTCCGATGATGCTTCGGCGATGGTGCCCCGACGAAGACAAATGCAGCACCAGCACATGCT
764 AGGTTCTCCG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
*
15886606 CGAGCCCAGCATGTGCTGCTGCAA-CC-C-T-CGGTCCGATC-----C---------A------A
828 CGAGCCCAGCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
15886647 T-
893 TG
* *
15886648 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCCCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
15886713 AGGCCAAAGGGGTGGGATGCGCAAGCTGGGGATCGGCCGGCTCCCCCTTTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * **
15886778 CACTGCTGCAACCATC-AGTCCGGTCCAATCTTAGACTGGGAATGAACTCAGTATGCCCGAGCCA
131 TGCTGCCGCAACCCTCGA-TCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * *
15886842 ACCAACGAAACGAACGGGCGGGCGGGCACTATGCTGGCCAGAGAGACAGCATGCGCAAGCTGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * *
15886907 ATCGATAGGGTGGTAGGTTGGTTTAGGCAAATCTTCATATTTCTACATGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
* *
15886972 GGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * **
15887037 TTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCTTAAGG
390 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
** * * * * *
15887102 AGTTTTCACCCCAAACTTCGAAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
*
15887167 GCTAAAAACTCGAAGTGTACAAGA-TTTGTGACCATTTGAAAAAATTGTCCCCATTTCAGACACT
520 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * * * *
15887231 TTAATGGCTACTGGCAGCAAAACTGTAAAATCTCAAATGTTCTCTAAAGGTGTGTGAGTTCTCAA
585 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
*
15887296 GGTTTGATGAGAGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
650 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* *
15887360 GCACACCCCGC-CCGGCCCCCCCGATTGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
715 GCACACCCC-CTCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGA
* * ** * * *
15887424 TGCTCCGACGATAGTGCCCCGGTGAAGAAAAATGTGACACCAACACATGCCCGAGCCCAGCATGT
777 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
*
15887489 GCTGCCGCAACCCATGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
842 GCTGCCGCAACCC-TCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15887543 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
15887608 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCTTCTGCATGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * *
15887673 TGCTACCACAACCCTCGATCTGGTCCTATCTTAGACTGGGAATCAACTCCGTATGCCTAAGCTAA
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
15887738 CCGACGAAACGAGCGGGCGGGCTGGCGGGCGGGACTACGCTGGCCAGATAGACGGGATGCGCAAG
196 CCGACGAAACGAGCGGGC--G--GGCGGGC---ACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * **
15887803 CCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGCCAT
254 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCAT
* * **
15887868 TTTTATGGCTTGTAAATCCATATAATGGTTGCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
319 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * ** * * * *
15887933 ACTCATTTTCTATTTCTCATTATTTTCGAAACTTTTTGCGATTCGAGATTTTTTAAAATTTTTTC
384 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * *
15887998 GAAAGTACTTTTGG-CCCAAACTTGGTAGACGTGATCCTT-TCTTTTTGTTGGCATGCACAAAAC
449 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
15888061 AATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCA
514 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
15888126 GACACTTTAATGGCTACTGGCAGCAAACATGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGT
579 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
15888191 TCTCGAGGTTTGATGATGGATA-GGGGCCAATATAAGGGCCAAGTACGAGCACCCATCACACATC
644 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
15888255 ATGTGCGCACACCCCCT-CGGCACCGCCAATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
709 ATGTGCGCACACCCCCTCCGGC-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * * *
15888319 GACGATGCTCTGGCGATTGTACCCCGACGAAGAAAAATGCGACACCAACACATGCCTGAGCCCAG
773 G-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * ** **
15888384 CATGTGCTGCCGTAACCCTCGGTCCGGTCCAATCTTGGACCAGGAATGAACTCCCAATG
837 CATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
15888443 CTTAGACTGGGAATGAACTCTGTATGCCTATGTCAACCCACGAAACGAACGTGCGGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
15888508 CGGCCTGAGGGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCCCCTCCATGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCCTCTGCGTGCTGCCGATC
* * *
15888573 CTGCTACCGCAACCCTC-AGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGA-TCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
15888637 AACCGACGAAATGAGCGGGAGGGCGGGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGTCGCG
194 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * *
15888702 GATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTCCATGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTA
* * * *
15888767 TGGCTTGTAAATTTATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAATTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
** *
15888832 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGGCCGGGATTTTTTAAAATTTTTGCGGAAG
389 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * * *
15888897 GAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGAATTTTTTTTGGCATGCACAAAACAATTC
454 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * *
15888962 AGCTAAACACACGAAGTGTACAAGATTTTGTGACCATATGAAAAAAGTGTCCCCATTTCAGACAC
519 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
*
15889027 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAA-GGGGTGTGAGTTCTCG
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
15889091 AGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * * * *
15889156 CGCACACCCCC-CCGGCCCCCCGATCGCCTGAGCCCTAATGCCCGAGCCCAG-CATGTGCTGCCG
714 CGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATG-CC--G-CCGGTCAGGTTCT-CCG
** * ** * * * *** ** ** **
15889219 TAACCCTCGATCCGGTCTGATCTTAG-ACTG-GGAATGAACTCTGTATGC-TTAG-AC-TGGGAA
774 ---CGAT-GCTCCGG-C-GATGGT-GCCCCGACGAA-GAAAAATG-CGGCACCAGCACAT--GCC
* * * * * * ** * * ** * * *
15889279 TGAACTCTGTATG-CCT-AAGTTAACCCACAAAACGAGCGTACGAGTGCTCA-A-T-GGACCA-G
828 CGAGCCCAGCATGTGCTGCCG-CAACCCTC--GTC-CG-GTCCGA-T-CTTAGACTGGGA--ATG
*** * *
15889338 AGGGGCGGGATG
884 A-ACTCCGTATG
* * * * * * ** ** * * **
15889350 CGTAAGCCAGGG-ATCGACCAGGTCCCCCTCTGTGTGTTGTCGATCCTGCTACCGCAACGCTCGG
1 C-TTAGACTGGGAAT-GA--A---CTCCGTATGCCT-AAGTC-AACC--C-A-CGAAACGAGC-G
* * * * ** *** * * *
15889414 TCCGGTCCGATCTTAGACTGGGAATGA-ACTCCGTATGC-CTAAGCCAACGGACGAAAT-GAG-C
52 TGCGG-GCG--CTCAG-CCGGCCA-GAGGGGCGGGATGCGC-AAG-C--CGG--G-GATCG-GTC
* *** * * * * *** * * * * * **** **
15889475 AGG-CGAGCACTACG-CCGGCCAGAGAGATGGGATG-CACAAGCCGTGGAT-CGATAGGGTGGTA
104 GGGTCCCCCTCTGCGTGCTGCC-GA-TCCT--GCTGCCGCAA-CCCTCGATCCGGTTCAATCTTA
* * * * * ** ** **** * ** ****
15889536 G-GTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC-ATTTTTATG-GC-TTC-TAAA
164 GACTGGG--AATG-A-A-CTCCGTATGCCT--AAGCCAA--CCGA-CGAAACGAGCGGGCGGGCG
** *** ** * *** * * * * * * ** **
15889596 TTCA-TACAATGGTCCCTTA-AGCCTTCACGTG-AAGTTTCATGGCAAC-ACTA--CTCAT-TTT
219 GGCACTACGCCGG--CCAGAGAGACGGGATGCGCAAG--CCGTGG-ATCGA-TAGGGTGGTAGGT
*** ** * * * * * * **** * *
15889654 CTATTT-TTCACAATTTTTGAAACTTTTTACG-GTTC-A-G-GATTTTTTAAAATTTTTTCAGAT
278 GGGTTTAGGCAC-A-TCTTCATA-TTTCTACGTG-CCAATGCCA-TTTTT-ATGGCTTGT-AAAT
** ** * * * ** ** * * ** *
15889714 TTTTGGAACCAAACTTGGTAGACATGATCCTT---GT-ATTTTTGTTGGCATGCACAAAAACATT
336 TCAT---A-C-AA--TGGT-CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG-AC-GACTCGTT
** **** ** * ** ** *** *
15889775 CAGCTA--AAAAATCGAAGTGT-ACAAGATTTT---G-T-GACCATTTGAAAAAAGTGTCCCCAT
391 -TTCTATTTTTCA-CGATTTTTGA-AACTTTTTACGGTTCG-GGATTTTTTAAAA-T-T----TT
* * * * * * * * *** * *** *
15889832 TTCAG-A-CACTTTAATGG---C-TAC-TGGCAG-C--AAACC-TATA-AAAT-CTCAAATGCTC
446 TTCGGAAGGAGTTT--TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
*** ****** * *** * * * * ** * * * **
15889884 TTTAAGGGGGTG-TGAGTTCTCGAGGTTTGATGAGGGA-TAGGGGGCCAATAT-AAGGGCCAAGT
509 AAAAAAATTCAGCTAAAAACTCGAAGTGT-A-CA-AGATTTTGTGACC-ATTTGAA---AAAAGT
* * * * *** * *** *
15889946 AGCAGCACCCA--TC-G-CACATCAAGTGCGCACACCCCCGGCCCCCCCG----ATCATCAGAA-
567 -G--TC-CCCATTTCAGACACTTTAA-TG-GC-TACTGGCAGCAAACCTGTAAAATC-TCA-AAT
** * ** * ** * * ** * *
15890002 -C-C-CCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGATGATGG-T-GCCCGGGTGAAGAA
623 GCTCTTTAAGGGGGT--GTGA-GTTCT-CGA-G--G-TTTGATGAGGGATAG--GGGGCCAATAT
* * * * * * * * **
15890062 AATTGCAGCACAA-CACAAGC-CCGAGC-CTAGCATC-TACTGC-CATA-ACCCT-C-G--ATCC
678 AA--G-GGC-CAAGTACCAGCACCCATCGC-A-CATCAT-GTGCGCACACCCCCTCCGGCCCCCC
*** * * * * ** * * *
15890117 GATC-T-GAGTTTAGACTGGGAATGAACTCC-AT-ATGCTTAGACTGGGAATGAACTCC-G-TAT
736 GATCGTCG-G---A-AC-CCCAATG-CCGCCGGTCA-GGTT-CTCCGCG-ATG--CTCCGGCGAT
* ** *** * * * ** *
15890176 GCCTAAGTCAACCC-ACG-A-AACGA-GCGTGCAGGTGCTCAGTCGGCCAGAGGGCTGGGATGTA
789 G-GT--G-C--CCCGACGAAGAAAAATGCG-GCACCAGCACA-T--GCCCGA-GCCCAGCATGT-
* * * * *
15890237 AAAGCCGGGGATCGATCGGATCCCCCTC-TACGTGCTGCCGATGC-T-G-CTGCCGTAACCCTTG
842 ---G-C-----T-G-CCGCA--ACCCTCGTCCG-G-T-CCGAT-CTTAGACTG--GGAA----T-
**
15890298 GTTCGGTCCG-AT-
883 GAAC--TCCGTATG
* * * *
15890310 CTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAACGAGCAG-GCGGGCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGCGGGC--GC--
* * ** * * * * ****** *
15890374 GTACTACGCCGACCACAGAGACCGGG-TGCGTAAGCCGTGGATCGATAGGGT-GGTAGGTGGGT-
61 -T-C-A-GCCGGCCAGAG-GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTG
* **** * * * * * * *
15890436 TTAGGCAC-ATCCT-CATATTTCTACATCC-CAATGCC-ATT---T-TTATGGCT-TG--TAAAT
121 CT--GC-CGATCCTGC-TGCCGC-A-ACCCTCGAT-CCGGTTCAATCTTA-GACTGGGAATGAAC
** ** * * * ** * ** * * ***
15890490 TCATATAATGGTCCCTTAAGCCTTCACG-TGAAGTTTC-A-TGGTAGGACGACTCATTTTCTATT
178 TC-CGT-AT-G--CC-TAAGCCAAC-CGACGAA---ACGAGCGGGCGGGCG-GGCA-CTAC-GCC
**** * **** * ** * *** ** *
15890552 TTTTATGATTTTTGAAACTTTTTGC-C--GTTCG-GGATTTTTTAAAATTTTTTCAGAAGT-AGT
230 GGCCA-GA-----GAGACGGGATGCGCAAG-CCGTGGA---TCGATAGGGTGGT-AG--GTGGGT
* * * ** * * * * * * *
15890612 TTTGGTCCCAAACTTGGTA----GACGTGATCC-TTG-TATTTTTGTTCGCATGCACAA---A-A
282 TTAGG-CAC-ATCTTCATATTTCTACGTG--CCAATGCCATTTTT-ATGGCTTGTA-AATTCATA
* * * ** * * * **** **
15890667 AAAT--TCAGCTAAAAAC-TCGAAGTGTACAAGATTT--T-G--TGACCA-T--TTGAAAAAAGT
341 CAATGGTC-CCTTAAGCCTTC-ACGTG---AAG-TTTCATGGCAAGACGACTCGTT-TTCTATTT
* * * ** * * ** *** * ** **
15890721 GTCCCCATTTCAGACACTTTAATGGCTACTGG-TAGCAAACCTATAAAATCTCAAATGCTCTTTA
399 TTCACGATTTTTGAAACTTT--T---TAC-GGTTCGGGATTTTTTAAAAT-T----TTTTC-GGA
* * * * * * ** * * **** * * ** * *
15890785 AGGGGGTGTGAGTTCTCGAGGTTTG-ATGA-GGGATAGGGGGCCAATATAAG--GGCCAAGTACC
452 AGGAGTTTTG-G-CCCCAAACTTGGTA-GACGTGAT-CCTTG--TATTTTTGTTGG-CATGCA-C
* *** ** ** **** **
15890846 AGCACCCA-TC-GC-ACATCACGTGCGCACACCCCGTGGCCCCCCTAATCGCATTCCACCGGTCA
509 A-AAAAAATTCAGCTA-AAAAC-T-CG-A-A----GT-G---TAC-AA--G-ATT-TTGTGACCA
** *** * * * * * * ** * *
15890908 GGTTT-TCAGGCGCTGCTCCGGCGATGGT--GCCTCGATGAA-GAAAAATAC-GGCACCAACACA
555 --TTTGAAAAAAG-TG-TCC--CCAT-TTCAGACAC-TTTAATG---GCTACTGGCAGCAA-ACC
** ** ** *** *** * ** * *
15890968 TGCTCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCG-G-G-TC-CAATCTTAGACTG-GGAAT
608 TG-TAAAATCT--CAAATGCT-CTTTAA--GGGGGT-GTGAGTTCTCGAGGTTTGA-TGAGGGAT
**** * * * * * * * **
15891028 -GAACTCCGTATGCTTATACTGGG--AATGAACTCCGTATGCC-TAAGTCA-ACTCATGAAACG-
665 AGGGGGCC--A---ATATA-AGGGCCAA-GTAC-CAGCA-CCCAT-CG-CACA-TCATG-TGCGC
** *** ** * ** ** * * * * *
15891087 AGCGTGCGGGTGCTCAACCAACTAGAGGGGCGGGATA-CGCAA-GTCG-AGGATCAGCTGGGTCC
717 A-C-ACCCCCT-C-CGGCC-CCCCGATCGTC-GGA-ACCCCAATGCCGCCGG-TCA----GGTTC
* * * * * * * ** * *
15891149 CCCTCTATG-TGCTGTCGATCCTACTGTCGCAACCCTCAATCTGATCTAATCTTAGACTGGGAAT
770 TCCGCGATGCT-CCGGCGA---T--GGT-G---CCC-CGA-C-GA-AGAA----A-AATGCG---
* * * * * ** * * *
15891213 GAACTCCGTATACCTAAGCCAACCGA-CCAAACGAACGGGTG-GGCGGGCGAGCGGGCACTACG-
813 GCAC-CAG--CA-C-ATG-C--CCGAGCC---C-AGCATGTGCTGC-CGC-AAC---C-CT-CGT
*** * *
15891275 CCGG-CC-A-AAGAGAC-GGG-ATGCGCAAGCCGTTGATCGATAGG
859 CCGGTCCGATCTTAGACTGGGAAT--G-AA--C--T--CCG-TATG
* * * * *** * * * ** **
15891316 GTGGTAGA-T-GGATTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGT
1 CT--TAGACTGGGA---ATG-A-A-CTCCGTATGCCT--AAGTCAA-CCCA---CGA-AAC--G-
* * * * * * ** * ** **** *
15891379 AAATTCATACAATGGTCCCTTAAGCC-TTCACGTGAAGTTTCATG-GCAAGAC---GA-C--TCG
48 --A-GCGTGC---GGGCGC-TCAGCCGGCCA-GAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
** * *** * * * * *** ** ** ** *** ** *** * *
15891436 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACG--GTTCGGGAT-TTTTTCAAAATTTTTCGG
105 GGTCCCCCTCTGCGTG-CTGCCGATCCTGCTGCCGCAACCCTCGATCCGGTTC--AA-TCTT-AG
** * * ** * ** * ** * ***** * ** ****
15891498 A-TGGAGTTTTG-GCCCCAAACTTG-GTAGACGTGATCC-TTGTATTTTTCTTGGCATGCATAAA
165 ACTGG-G-AATGAACTCCGTA--TGCCTA-A-GCCAACCGACGAAACGAGC-GGGCGGGCGGGCA
** *** * * * * * ** *** * ** ***** ***
15891559 AAAATTCAGCTA-A-AAACTCGAAGTGTACAAGATTTTGTGA-CCATTTGAAAAAAGTGTCCCCA
223 CTACGCCGGCCAGAGAGAC-GGGA-TGCGCAAG-CCGTG-GATCGATAGGGTGGTAG-GT--GGG
* ** * * * *
15891621 TTTCA-G-ACA-CTTTA-ATGGCTAC-TGGC-A-G-CA-----A--ACCTGTAAAATC-T-CAAA
281 TTT-AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC-AA
* * ** * * * * ** * ** * ***
15891669 TGCT-CTTTAAGGGGGTGTGA-GTTCTCAAGTTTTGATGAGGGATAGGGGGC-C--AATATAAGG
344 TGGTCCCTTAA--GCCT-TCACG---TGAAG-TTTCAT--GGCA-AGACGACTCGTTTTCTATTT
** * **** ** * *** * * **** * ***** ***
15891729 GCCAAG-TACCAGCACCCATCGCAC--ATC---ATCTGCGCACA-CCCCCCGGCCCCCCCGATCG
399 TTCACGATTTTTG-AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG----AAGGA--G
***** * * ** * * ** **
15891787 TCCAAACCCCAATGCCGTCGGTCAG--GTTCTCC-AGCGA-TGCT-CCGGCGATGGTGCCCCGAC
457 TTTTGGCCCCAA--AC-TTGGT-AGACGTGATCCTTG-TATTTTTGTTGGC-A---TG---C-AC
* * * ** *** * ** * * **
15891847 GAAGAAAAATACGACACCAGCACATGCTCG-AGCCCAGCATG-TGCTATCGCAGCC-CTTG--GT
509 -AA-AAAAATTC-A-GCTA--A-AAACTCGAAGTGTA-CAAGATTTTGT-G-A-CCATTTGAAAA
** * ** * * * * * *
15891907 CTG-GT-CCGATCTT-AG--ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG-AAACGAG
563 AAGTGTCCCCAT-TTCAGACACT-TTAATG-GCTAC---TGGC--AG-CAAACC-TGTAAA--AT
**** * * * * * * * ** **
15891966 CATGCGGGCGTTCAATCAGCTAGGGGG-G-GA--T-GCGAAAG-TCGAGGATCGATCA-GGTCCC
616 C-T-CAAATGCTC-TTTA---AGGGGGTGTGAGTTCTCG-AGGTTTGATGAGGGAT-AGGGGGCC
** * ** * * ** * * * *
15892024 CCTCTGCGTGCTGCCGATGCTACTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGA
673 AATATAAG-G--GCC-AAG-TAC--CAGC-A-CC-CA-T-C-G-CACATCAT-G--TGCGCA--C
*** * ** * * ** * * * ***** *
15892089 ACTTCGTATGCCTAAGCCAACCGA-CGAAAC-GAGCGGGCACTG-CACTGG-CTA-GAAAGACGG
719 AC--CCCCT-CC--GGCCCCCCGATCG--TCGGAAC-CCCAATGCCGCCGGTC-AGGTTCTCCGC
* * * *** * ** ** ** *** * * ****
15892149 GATGCGCAAGTCG-TGGAT--CGATAGGTTGGTAGGTG-GG-TTTAGGTACAT-CTTC-A-TATT
775 GATGCTC-CGGCGATGG-TGCCCCGACGAAGAAAAATGCGGCACCA-GCACATGC-CCGAGCCCA
* * ** ** * * * * **** * **
15892206 TC-TGTG-TG--GCAATGCCATTTTTATGG-CTTGTAAATTCATACAATTGTCCCTTAAGCCTTG
836 GCATGTGCTGCCGCAA--CC-CTCGTCCGGTC-CG---A-TCTTA-GACTGGGAATGAA--CTCC
*
15892266 GATCTTAG
890 G-T-AT-G
* *
15892274 ACTGGGAATGAACTCGTATGCTTGGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
1 -CT--TAG---------A--C------TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * ** ** * *
15892339 CGAGCGTACAGTTGCTCAGCCGGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCAGACGGGTCCC
46 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCC
** * * *
15892404 CCTCTATGTGCTGCCGATCCTGCTGTCGCAACCCTC-AGTCCGATCCAATCTTAGACTGGGAATG
111 CCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGA-TCCGGTTCAATCTTAGACTGGGAATG
* * * * *
15892468 AACACTGTATGCCTAAGCCAACCAACGAAACGAGCGGGCGGGTGGGCGAGCACTACGCCAGCCAG
175 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC----GGGCGGGCACTACGCCGGCCAG
* * *
15892533 AGACACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGATGGGTTTTGGCACATCTTCATATT
236 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* **
15892598 TCTACATAACAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
301 TCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * *
15892663 AAATTTCATGGCAAGACGACTCGTTTTTTATTTTTCAAGATTTTTGAAACTTTTTATGATTCGGG
366 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
* ***
15892728 ATTTTTTAAAATTTTTTCGAAAGGAGTTTTCATCCCAAACTTGGTAGACGTGATCCTTGTATTTT
431 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
** * * *
15892793 TGTTCACGTGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTTCAAGATTTTGTGACCATTTGAA
496 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
15892858 AAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
561 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * * * * * *
15892923 CTTGAAGGGGGTGTGAGTTCTCGAGGTATAATGAGGAATAAGGGGCCAATATAAGTGCCAAGTAA
626 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * * * *
15892988 C-GACACCCATTGCACATCCTATGCGCAGACCCCC-CCGGCCCCCCCGATCGCCAGAACCCCAAT
691 CAG-CACCCATCGCACATCATGTGCGCACACCCCCTCCGG-CCCCCCGATCGTCGGAACCCCAAT
* **
15893051 GCCGTCGGTCAGGTTCTCCAATGATGCTCCGGCGATGGTGCCCC-AGCGAAGAAAAATGCGGCAC
754 GCCGCCGGTCAGGTTCTCC-GCGATGCTCCGGCGATGGTGCCCCGA-CGAAGAAAAATGCGGCAC
* * *
15893115 CAACACATGCCCTAGCCCAGCATGTGCTGCTGCAA-CC-C-T-C-G---G-TC-----C---G--
817 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAA
15893161 -G---TCCG-AT-
882 TGAACTCCGTATG
* * **
15893168 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGTGCTCAAT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * *
15893233 CGACCAGAGGTGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGTGTGCTACCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * ** * *
15893298 TGCTGCCACAACCCTC-AGTCTGGTTTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCAA
131 TGCTGCCGCAACCCTCGA-TCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15893362 ACCGACGAAATGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATCCGCAAGCCGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
15893427 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TGCATGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
* * *
15893491 TGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCAT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
** * * *
15893556 TTTCTATTTTTCACGATTTTCAAAACTTTTTATGGTTTTGGGGTTTTTT-AAATTTTTTCGGAAG
390 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCGGGATTTTTTAAAATTTTTTCGGAAG
* * * *
15893620 GATTTTTGGCCCCAAAATTGGTAGACGTAATCCTTGTATTTTTATTGGCATGCAC-AAAAAATTC
454 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
15893684 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACA
519 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACA
15893749 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
583 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
15893814 GAGGTTTGATGAGGGATA-GGGGCCAATATAAGGTCCAAGTA-CAGCA-CCA--G-ACAATAATG
648 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC-ATCATG
* ** * * *
15893873 TGC-CACACACCCCT----------AATCGTCCAAACTCTCAAT-CCG-C-GTCA-G-TCTCAGT
712 TGCGCACAC-CCCCTCCGGCCCCCCGATCGTCGGAAC-CCCAATGCCGCCGGTCAGGTTCTCCGC
* * * *
15893922 GATGCTTC-GTGAT-GTG-CCCGA-AAAGAAAAA-GCAGCA-C--CACATG--CGAG-CCAGCAT
775 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
** * * *
15893976 GTGCTAATCGCAA-CCTTGTCTGGTCC-A----A-ATCT--TAA-GAA------A--
840 GTGCT-GCCGCAACCCTCGTCCGGTCCGATCTTAGA-CTGGGAATGAACTCCGTATG
* * * *
15894015 --T---CT-GG-ATGAA-T-C-TAT--CT-AGTCAACCCATGAAACGAGCATG-GGGCGTTCAAT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC-AG
* * * * *
15894066 CCGGCCAGAGGGG-GAGATGCGCAAGCC-GGGATCGATC-AGTCTCCTCCACTG-GTGCTACCGA
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC-CC-CCTCTGCGTGCTGCCGA
* * * * * *
15894127 T-CTACTGCCGCAACCTCTTGGTCCGG-TCGATCTTAGACTGAGAATGAA-TTCG-ATCGCCTAA
128 TCCTGCTGCCGCAACC-CTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTAT-GCCTAA
* * * *
15894188 GCGAACCGACG-AACGAGCGGGCGGTCGGCGGCGGCACT--GACTGCC--A-AGATGGGATGCGC
191 GCCAACCGACGAAACGAGCGGGC-G--GGC-G-GGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * ** *
15894247 AAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGGCAATGC
251 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGC
* * *
15894312 CATTTTTATGACTTGTAAATTCATACAATTGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
316 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* **
15894377 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGA-GGTTCAAGATTTTTTAAAATTT
381 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT-ACGGTTCGGGATTTTTTAAAATTT
* * *
15894441 TTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACA
445 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* **
15894506 AAAAAATTCAGCTAAAAACTCGATGTGTACAAGATTTTGCCACCATTTGAAAAAAGTGTCCCCAT
510 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
15894571 TTTAGACACTTTAATGGCTA-TAGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
575 TTCAGACACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
*
15894635 TGAGTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
639 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * *
15894700 ACATCATGTACGCACACCCCCT-CGGCCCCCCGATCGTC-GAAACCCAGTGCCGTCGGTTAGG-T
704 ACATCATGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * *
15894762 -T---C--T--T----CGATGATGCTCTGACGAAGAAAAATACGACACCAGCACATGCCCGAGCC
769 CTCCGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * *
15894815 CAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGTTCTTAGACTGGGAATGAACTTCGTATG
834 CAGCATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15894877 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCTTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** ** * **
15894942 CGGCCAGAGGGGCGGGATGCATAAGCCGGGGATCGACCAGGTCCCCCTCTGCGTGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * *
15895007 TATTGCCGCAACCCTCGGT--GTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
131 TGCTGCCGCAACCCTCGATCCG-GTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * ** *
15895070 AACCGATGAAATGAACGGGCGGGCGGGCACTACGCAAGCCAGAGAGACGAGATGCGCAAGCCGTG
194 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * *
15895135 GATCGATAGGGCGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTA
*
15895200 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * *
15895265 TTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGATTCAGGATTTTTTTAAATTTTTTCGAAAG
389 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * * *
15895330 TAGTTTTGG-CCCAATACTTGCTAGACGTGATACTTGTATTTTTTTTGGCATGCACAAAAAAATT
454 GAGTTTTGGCCCCAA-ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * **
15895394 CAGCAAAAAATTTGAAGTGTACAAGATTTTGCCACCATTTGAAAAAAGTGTCCCCATTTCAGACA
518 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
15895459 CTTTATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATCCTCTTTAAGGGGGTGTGAGTTCTT
583 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * **
15895524 GAGGTTTCATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTAACACATCATGT
648 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * * *
15895589 GCGCACAGCCCCC-CCGGCCCCCCCGATTGCCGGAACCCCAATGTCGCCGATCAGGTTCTCTGGT
713 GCGCACA-CCCCCTCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC-CGC
* * * *
15895653 GATGCTCCGGCGATGGTGCCCC-AGTGAA-AAGAAATGCAGCACCAGCACATGCTCGAGCCCAAC
775 GATGCTCCGGCGATGGTGCCCCGA-CGAAGAA-AAATGCGGCACCAGCACATGCCCGAGCCCAGC
* *
15895716 ATGTGCTGGCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
838 ATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15895774 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAATGAGCGTGCGGCCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
15895839 CGGCCTA-AGGGGCCGGATGCGCAAGCCAGGGATTGGCCGGATCCCCCTCTGCGTGCTGTCGATG
66 CGGCC-AGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * * *
15895903 CTGCTGCCACAACCCTCGGTCCGGTCCTATCTTAGGCTAGGAATGCACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15895968 ACCGACGAAACGAGCGTGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGACGGGATTCGCAAGCC
195 ACCGACGAAACGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
15896033 GTTGATCGAT-GTGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTGCATGCCAATGCCATT
256 GTGGATCGATAG-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
* ** *
15896097 TTAATGGCACGTAAATTCATACAATGGTCCCTTAAACCTTCACGTGAAGTTTCATGGCAAGACGA
320 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * ** *
15896162 CTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGATTTAGGATTTTTTAAAATTTTTTCA
385 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * * * *
15896227 AAAGGAGTTTTGGTCCAAAACTTGCTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAA
450 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * ** * *
15896292 ATTCAGCAAAAAATTTGAAGTGTACAAGATTTTGCCACCATTTGGAAAAAGTTTCCCCATTTCAG
515 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
15896357 ACACTTTAATTGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
580 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* ** * *
15896422 CTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGTGAAGTACCAGCACCCATCACACATAA
645 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
** * * * *
15896487 TGTGCGTGCACCCCCCCCGCCCCCCCGATTGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
710 TGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-G
* * * * * *
15896552 TGATGCTCCGACGATGGTGCCCTGGCGAAGAAAAATGCAGCACCAGCACATGCTCGAGCCCAGCA
774 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* *
15896617 TGTGCTGGCGCAACCCTCAGTCCGGTACGATCTTAGACTGGGAATGAACTCCGTATG
839 TGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
15896674 CTTAGACTGGGAACGAACTCCGTATGCCTAAGTCAAACCACGAAATGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
15896739 CGGCCTGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATGC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * ** * * *
15896804 TGCTGCCGTAACCCTCGGTCCGGTTTGATCTTAGGCTAGGAATGAACTCCGTATGCCTAAGCCAT
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
15896869 CCGACG-AA--A-------------CA--A-GCCGGCCAGAGAGACGGGATGCACAAGCCATGGA
196 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * * *
15896915 TCGAT-GTGGTGGTAGGTGGGTTTAGGCACATCCTCGTATTTCTGCATGCCAATGCCATTTTTAT
261 TCGATAG-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
** * *
15896979 GGCACGTAAATTCATACAATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAGACGACTCAT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * * * * *
15897044 TTTCTATCTTTCATGATTTTTGAAACTTTTTGCTGTTCGGGACTTTTTAAAATTTTTTTGAAAGG
390 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
*** **
15897109 AGTTTTGGAAACAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCGTAAAAAAATTCA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
15897174 GCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGAGTCCCCATTTCAGACACT
520 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
15897239 TTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
585 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
15897304 GGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGT
650 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * ** * *
15897369 GCACACCCCCT--GGCCCCGCCGATCGCCAGAACCCCAATGCCGTTGGTCAAGTTCTCCGGTGAT
715 GCACACCCCCTCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGAT
** * *
15897432 GCTCCGATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTA
778 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
*
15897497 CTGCTGCAA-CC-C-T-C-G---G-TC-----C---G-AT---CT--G-AT-
843 CTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
15897524 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACAAAACGAGCGTGTGGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** ** * *
15897589 CGGCCAGA-GGGCTGGGATGTGCAAGCCGGGGATCGACCATGTCCCCTTCTGCATGCTGCCGATC
66 CGGCCAGAGGGGC-GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * *
15897653 CTGCTGCCGTAACCCTTGGTCCGG-TCTGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGATCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* **
15897717 AACCGACGAAACGAGCGGAATAGCGGGCGGGCACTACGCCGGCTAGAGAGACGGGATTTGCAAGC
194 AACCGACGAAACGAGCGG----GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
15897782 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATT
255 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
* *
15897847 TTTATCGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCTAGACGA
320 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
** * * *
15897912 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTATGGTTCGAGATTTTTAAAAATTTTTTCG
385 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
*
15897977 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAA
450 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
15898042 ATTCAGC-GAAAACTGGAAGTGTACAAGATTTTGTGACCATTT-CAAAAAGTGTCCCCATTTCAG
515 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
15898105 ACACTTTAATAGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
580 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
15898170 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAAGTACCAG----CA-C-C-CATCA
645 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
**
15898228 ------CACA-CCCC-CCGGCCCCCCCGATCGTCGGAACCCCAATGCCATCGGTCAGGTTCTCCG
710 TGTGCGCACACCCCCTCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * * *
15898285 ACGATGGTCCGGCTATGGTGGCCTGACGAGGAAAAGTGCGGCACCAGCACATGCCCGAGCCCAGC
774 -CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * *
15898350 ATGTGCTACCGTAACCATCAGTCCAGTCTGATCTTAGACTGGTAATGAACTCCGTATG
838 ATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
15898408 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAACGTTCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
15898473 CGGCCAGATGGGCGGGATGCGCAAGCCGGGGATCGACCGAGTCCCCCTCTGCGTGTTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * * * * *
15898538 TGCTACCACAACCATTGATCTGG-TCTGATCTTAGAATAGGAATGAACTCCATATACCTAAGCCA
131 TGCTGCCGCAACCCTCGATCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * *
15898602 ACTAATGAAACGAGCAGGAGGGCGGGCAGGCGGGCACTAC-ACAGCTAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAGC----GGGC--G--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
15898666 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTACATGCCAATACC
252 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCC
*
15898731 ATTTTTATGGCTTGTAAATTCAGACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
317 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * ** *
15898796 TGACTCGTTTTTTATTTTTCATGATTTTCAAAACTATTTACGGTTCGGGATTTTTTAAAATTTTT
382 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * * *
15898861 TTGAAAGGAGTTTTGGCCCCAAACCTAGTAGACGTGATCCCTGTATTTTTGTTGGCATTCACAAA
447 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
15898926 AAAATTCAGCTAAAAACTCGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTC
512 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
15898991 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTCTTTAAGGGGGTGTGA
577 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* **
15899056 GTTCTCAAGGTTTGAAAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
642 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * *
15899121 TCACGTGTGCACA-CCCC-CCGGCCCCCCTGATCGCCAGAACCCCAACGCCGCCGGTCAGGTTCT
707 TCATGTGCGCACACCCCCTCCGGCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * * * *
15899184 CTGACGATGCTCCGGCGATGGTGCACCGACGAAGAAAAATGTGACACAAGCACATGCCCGAGCCC
771 CCG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * *
15899249 AGCATGTGCT-CTCGTAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATG
835 AGCATGTGCTGC-CGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15899310 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *** * **
15899374 CGGCCAGAAGGGCGGGATGCGCAAGTCGGGGATCAACCGAGTCCCCCTCTGTATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * ** * * * *
15899439 TACTACCGCAACCCTTGGTCTGATTTGATCTTAGACTAGGAATAAATTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
15899504 CCGACGAAACGAGTGGGCGGGCGAGCAGGCACTACGCCGGCCAAAGAGACGGGATGCGCAA-CCG
196 CCGACGAAACGAGCGGGCGGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
15899568 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTGCATGCCAATGCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
* * *
15899633 TATGGCCTGTAAATTCATACAAGGGTCCCTTAAGCCTTAACGTGAAGTTTCATGGCAAGACGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
15899698 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGA
387 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
*
15899763 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATTG-ACAAAAAAA
452 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAA
* *
15899827 TTCTGCTAAAAACTCGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAGA
516 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
15899892 CACTTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
581 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
15899957 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCATTGCACATCAT
646 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
15900022 GTGCGCACACCCCCT--GGCCCTCCCGATCATCGGAACCCCAATGCCGCCGATCAGGTTATCCGG
711 GTGCGCACACCCCCTCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-G
* *
15900085 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCCGCA
774 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * **
15900150 TGTGCTGCCGTAACCCTCGGTTCGGTTCGATCTTAGACTGCCAATGAACTCCGTATG
839 TGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15900207 CTTAGACTGGG-ATGAACTCTGTATGCCTAAGTCAACCCACGAGACGAGCATGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * *
15900271 C-GCCAGAGGGGCGGGATGCACAAGCTGGGGATCGATCGGGTCTGCCTCTGCGTGCTCCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * * *
15900335 TGCTGCCACAACCCTCGGCCCGG-TCTGATCTTAGACTGGGAATTAACTTCGTATGCTTAAGCCA
131 TGCTGCCGCAACCCTCGATCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * * *
15900399 ACTGACTAAACGAGCGGGCGGACGGGTAGTACGTCGACCAAAGAGACGGGATGCGCAAGCCATGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
15900464 ATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCGTGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
*
15900529 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTCCATGGCAAGACGACTCGT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * **
15900594 TTTCTATTTTTCATGATTTTTGAAACTTTTTACAGTTCAGGATTTTTTAAAATTTTTTTAGAAGG
390 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* *
15900659 A-TATTTGGCTCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTC
455 AGT-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * * *
15900723 AGCTAAAAATTCAAAGTGTACAAGATATTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACAC
519 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* **
15900788 TTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTA
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
** *
15900853 AGGTTTGATGAGGGATAGGGATCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * ** *
15900918 TGCACA-CCCC-CCGGCCCCGTCGATCGCCAGAACCCCAATGCCGTTGGTCAGGTTCTCCGGTGA
714 CGCACACCCCCTCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGA
* * *
15900981 TGTTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGTCCGAGCCTAGCATGT
777 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
**
15901046 GCTGTTGCAA-CC-C-T-C-G---G-TC-----C--GG--T---CT--G-AT-
842 GCTGCCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
15901074 CATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACAAAACGAGCGTGCGGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * *
15901139 CGGCCA-AAGGGCTGGGATGTGCAAGCCGAGGATCGACCAGGTCCCCTTCTGCATGCTGCCGATC
66 CGGCCAGAGGGGC-GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * *
15901203 CTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * **
15901268 ACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCTAGAGAGCCGGGATTTGCAAAGC
195 ACCGACGAAACGA---G-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC-AAGC
* **
15901333 CGTGGATTCGATAGGGTGGTAGGTGGGGTTTAGGGCACAATCTTCATATTTCTGCAAGCCAATGC
255 CGTGGA-TCGATAGGGTGGTAGGT-GGGTTTA-GGCAC-ATCTTCATATTTCTACGTGCCAATGC
* *
15901398 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAGGTCTTCACGTGAAGTTTCATGGCAAG
316 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* **
15901463 ACGACTCGTTTTCTATTTTTCATGA-TTTTGATAACATTCTTTGTGGTTCGGGATTTTTTAAAA-
381 ACGACTCGTTTTCTATTTTTCACGATTTTTGA-AAC-TT-TTTACGGTTCGGGATTTTTTAAAAT
* * ** * *
15901526 TTTTTCGGAGGGGAGTTTTGGCCCTAAACTTGGTAGACGTGCCCTCTTGTATTTTTCCTTGGGAT
443 TTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC-CTTGTATTTTT-GTTGGCAT
*
15901591 GCACCAAAAAAATTCAGCTAAAAACTCGAAGTGTATCAAGCATTTTTGTGACCAAGCGCTTGAAA
505 GCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTA-CAAG-A-TTTTGTGACC-A---TTTGAAA
*
15901656 AAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTC
562 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * *
15901720 TTTAAGGGGGTAATGAGTTCTCAACGTTTGATGAGGGATAGGGGAG-CAATATAAGGGCCAAGTA
627 TTTAAGGGGGT-GTGAGTTCTCGAGGTTTGATGAGGGATAGGGG-GCCAATATAAGGGCCAAGTA
** * * * **
15901784 TGAGCACCCTTTGCACATCATGGGCGCACA-CCCC-CCGTTCCCCCGATCGTCGGAACCCCAATG
690 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATG
* * * *
15901847 TCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTACACCGATGAAGAAAAATGCGGCACCA
755 CCGCCGGTCAGGTTCTCCG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * *
15901912 GCACATGCCC-AGCCCAGCATGTGCTGCCACAACCCTCGGCCCGATCCGATCTTAGACTTGGAAT
819 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAAT
15901976 GAACTCCGTATG
883 GAACTCCGTATG
* * * *
15901988 CTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
15902053 GGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** ** * * * *
15902118 TGCTGCCGCAACCCTCGGTCTAGTTTGATGTTAGACTGGGATTGAATTTCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
15902183 CTGACGAAGCTAGCAGGCGGGCGGGCGGGCGGGCGGGCTGGCACTAGGCCGGCCAGAGAGGCGGG
196 CCGACG-A---A--A------CGAGCGGGCGGGC--G--GGCACTACGCCGGCCAGAGAGACGGG
* * * * *
15902248 ATTCGCAAGCCGTGGATCGTTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGT
245 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGC
* * * *
15902313 CGATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAATCCTTCACGCGAAGTTTCAT
310 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
15902378 GGCAAGACGACTCATTTTCTATTTTTTACGATTTTTGAAACTTTTTACGGTTCGGGATTTTCTAA
375 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * * * *
15902443 AATTTTTTCGGAAGGAATTTTGGCCCTAAACTTTGTAGACATGATCCTTGTATTTTTTTTGGCAT
440 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
15902508 GCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACAAGATTTTGTGACCATTCGAAAAAAATGTC
505 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
15902573 CCCATTTCAGACACTTTAATGGCTATTGGTAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGG
570 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
15902638 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCA
635 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * ** *
15902703 TCGCACAACATGTGCGCACACCCCC-CTGTCCCCCCTGATCACCGGAACCCCAATGCCACCGGTC
700 TCGCACATCATGTGCGCACACCCCCTCCGGCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTC
* ** *
15902767 AGGTTCTCCGGCAATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCC
764 AGGTTCTCC-GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
* * * * * * * *
15902832 TGAGCCCAACATGTGCCGTCACAACCCTCGGTCTC-GTCCAATCATAGACTAGGAATGAACTCCG
828 CGAGCCCAGCATGTGCTGCCGCAACCCTC-GTC-CGGTCCGATCTTAGACTGGGAATGAACTCCG
15902896 TATG
891 TATG
* * *
15902900 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGATCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
15902965 CGGCCAGAGGGGTGAGATGCGTAAGCCGGGGATCGGCCGGGT--CCC-C--C-T-CT----A-CG
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * *
15903018 TGCTGCCGCAACCCTC-AGTTTGG-TCGGATCGTAGACTGGGAATGAACTCCGTATGCCTAAGCC
131 TGCTGCCGCAACCCTCGA-TCCGGTTC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
15903081 AACCGACGGAACGAGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGC
194 AACCGAC-GAA--A-CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
** * * *
15903146 CGTGGATAAATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGCATGCCAATGCCATT
255 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
*
15903211 TTTATGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
320 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* ** *
15903276 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTG
385 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * ** * *
15903341 AAATGAGTTTTGGCCCCAAACTTCTTAGACGTGATCCTTGTATTTTTTTTTCGCATGCACAAAAA
450 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAA
* * *
15903406 AATTCAGCTAAAAACCCGAAGTATACAAGATTTTCTGACCATTTGAAAAAAGTGTCCCCATTTCA
514 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
15903471 GACACTTTAATGGCTACTGGCAGCAAACCTATAAAATATCAAATGCTCTTTAA-GGGGTGTGAGT
579 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
15903535 TCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATC
644 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** * * *
15903600 ATGTGCACACACCCCC-CCGGTCCCCCCGATCACCGGAACCCCAATGCTGCCCGTCAAGTTCT-C
709 ATGTGCGCACACCCCCTCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * *
15903663 -CGA--------CGATGGTGCCCCGACGAAGAAAAATGAGGCACTACCACATGCCCGAGCCCAGC
773 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
15903719 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
838 ATGTGCTGCCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
15903777 C
1 C
15903778 GTAAGCCAAC
Statistics
Matches: 29422, Mismatches: 5963, Indels: 5193
0.73 0.15 0.13
Matches are distributed among these distances:
829 82 0.00
830 281 0.01
831 119 0.00
832 40 0.00
833 28 0.00
834 39 0.00
835 18 0.00
836 9 0.00
837 6 0.00
838 22 0.00
839 13 0.00
840 7 0.00
841 9 0.00
842 12 0.00
843 7 0.00
844 22 0.00
845 28 0.00
846 54 0.00
847 5 0.00
848 5 0.00
849 13 0.00
850 174 0.01
851 9 0.00
852 6 0.00
853 5 0.00
854 16 0.00
855 7 0.00
856 167 0.01
857 55 0.00
858 234 0.01
859 414 0.01
860 149 0.01
861 61 0.00
862 86 0.00
863 320 0.01
864 281 0.01
865 20 0.00
866 27 0.00
867 34 0.00
868 196 0.01
869 644 0.02
870 602 0.02
871 368 0.01
872 453 0.02
873 1128 0.04
874 386 0.01
875 478 0.02
876 521 0.02
877 700 0.02
878 160 0.01
879 128 0.00
880 664 0.02
881 134 0.00
882 420 0.01
883 542 0.02
884 223 0.01
885 247 0.01
886 269 0.01
887 279 0.01
888 444 0.02
889 727 0.02
890 284 0.01
891 340 0.01
892 176 0.01
893 1022 0.03
894 828 0.03
895 1638 0.06
896 1058 0.04
897 1526 0.05
898 195 0.01
899 600 0.02
900 798 0.03
901 1348 0.05
902 570 0.02
903 317 0.01
904 322 0.01
905 423 0.01
906 23 0.00
907 18 0.00
908 11 0.00
909 91 0.00
910 85 0.00
911 85 0.00
912 154 0.01
913 24 0.00
914 199 0.01
915 19 0.00
916 98 0.00
917 273 0.01
918 220 0.01
919 155 0.01
920 34 0.00
921 137 0.00
922 36 0.00
923 31 0.00
924 45 0.00
925 22 0.00
926 54 0.00
927 22 0.00
928 16 0.00
929 39 0.00
930 16 0.00
931 12 0.00
932 38 0.00
933 48 0.00
934 44 0.00
935 41 0.00
936 32 0.00
937 44 0.00
938 49 0.00
939 44 0.00
940 42 0.00
941 60 0.00
942 63 0.00
943 62 0.00
944 35 0.00
945 56 0.00
946 77 0.00
947 45 0.00
948 52 0.00
949 51 0.00
950 44 0.00
951 75 0.00
952 75 0.00
953 38 0.00
954 38 0.00
955 60 0.00
956 75 0.00
957 52 0.00
958 45 0.00
959 50 0.00
960 39 0.00
961 59 0.00
962 29 0.00
963 23 0.00
964 23 0.00
965 19 0.00
966 9 0.00
967 38 0.00
968 17 0.00
969 17 0.00
970 15 0.00
971 20 0.00
972 22 0.00
973 12 0.00
974 7 0.00
975 16 0.00
976 18 0.00
977 23 0.00
978 22 0.00
979 20 0.00
980 40 0.00
981 21 0.00
982 21 0.00
983 26 0.00
984 41 0.00
985 34 0.00
986 31 0.00
987 43 0.00
988 56 0.00
989 57 0.00
990 25 0.00
991 16 0.00
992 25 0.00
993 20 0.00
994 14 0.00
995 32 0.00
996 30 0.00
997 21 0.00
998 14 0.00
999 19 0.00
1000 21 0.00
1001 31 0.00
1002 11 0.00
1003 16 0.00
1004 11 0.00
1005 13 0.00
1006 18 0.00
1007 20 0.00
1008 45 0.00
1009 17 0.00
1010 13 0.00
1011 17 0.00
1012 18 0.00
1013 16 0.00
1014 24 0.00
1015 40 0.00
1016 19 0.00
1017 24 0.00
1018 17 0.00
1019 12 0.00
1020 30 0.00
1021 30 0.00
1022 16 0.00
1023 22 0.00
1024 483 0.02
1025 456 0.02
1026 633 0.02
1027 400 0.01
1028 390 0.01
1029 367 0.01
1030 584 0.02
1031 490 0.02
1032 426 0.01
1033 307 0.01
1034 457 0.02
1035 332 0.01
1036 437 0.01
1037 536 0.02
1038 321 0.01
1039 290 0.01
1040 264 0.01
1041 310 0.01
1042 303 0.01
1043 244 0.01
1044 341 0.01
1045 200 0.01
1046 170 0.01
1047 214 0.01
1048 203 0.01
1049 209 0.01
1050 226 0.01
1051 422 0.01
1052 790 0.03
1053 304 0.01
1054 902 0.03
1055 639 0.02
1056 1008 0.03
1057 318 0.01
1058 181 0.01
1059 597 0.02
1060 630 0.02
1061 128 0.00
1062 517 0.02
1063 221 0.01
1064 115 0.00
1065 161 0.01
1066 131 0.00
1067 376 0.01
1068 122 0.00
1069 168 0.01
1070 78 0.00
1071 303 0.01
1072 77 0.00
1073 257 0.01
1074 204 0.01
1075 103 0.00
1076 66 0.00
1077 78 0.00
1078 248 0.01
1079 630 0.02
1080 101 0.00
1081 431 0.01
1082 181 0.01
1083 561 0.02
1084 88 0.00
1085 64 0.00
1086 419 0.01
1087 1261 0.04
1088 78 0.00
1089 17 0.00
1090 37 0.00
1091 23 0.00
1092 25 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (894 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCT
CCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:15867589 original size:26 final size:26
Alignment explanation
Indices: 15867560--15867612 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15867550 CCGGTCCGAT
* *
15867560 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATCAACTCCGTATG
*
15867586 CTTAGACTGGAAATCAACTTCGTATG
1 CTTAGACTGGAAATCAACTCCGTATG
15867612 C
1 C
15867613 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATCAACTCCGTATG
Found at i:15868479 original size:26 final size:26
Alignment explanation
Indices: 15868450--15868501 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15868440 CAGTCCGATA
15868450 TTAGACTGGGAATGAACTCCGCATGC
1 TTAGACTGGGAATGAACTCCGCATGC
*
15868476 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGCATGC
15868502 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.21, G:0.27, T:0.25
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGCATGC
Found at i:15870264 original size:26 final size:26
Alignment explanation
Indices: 15870235--15870284 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
15870225 CTGATCCGAT
15870235 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
15870261 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
15870285 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.22, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:15871927 original size:11 final size:11
Alignment explanation
Indices: 15871911--15871944 Score: 68
Period size: 11 Copynumber: 3.1 Consensus size: 11
15871901 GCTAGTTAGG
15871911 TTCTCCGACGA
1 TTCTCCGACGA
15871922 TTCTCCGACGA
1 TTCTCCGACGA
15871933 TTCTCCGACGA
1 TTCTCCGACGA
15871944 T
1 T
15871945 GGTGCCCCGA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 23 1.00
ACGTcount: A:0.18, C:0.35, G:0.18, T:0.29
Consensus pattern (11 bp):
TTCTCCGACGA
Found at i:15872064 original size:26 final size:26
Alignment explanation
Indices: 15872026--15872078 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15872016 CCCATCCATT
15872026 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15872052 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15872078 C
1 C
15872079 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15875611 original size:25 final size:26
Alignment explanation
Indices: 15875568--15875619 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
15875558 CCAGTTCGAT
15875568 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
* *
15875594 CTTAGA-TTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
15875619 C
1 C
15875620 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 18 0.75
26 6 0.25
ACGTcount: A:0.27, C:0.21, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:15877390 original size:26 final size:26
Alignment explanation
Indices: 15877361--15877413 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15877351 TCTGATCCGT
*
15877361 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGAGAATGAACTCTGTATG
*
15877387 CTTAGACTGAGAATGAACTTTGTATG
1 CTTAGACTGAGAATGAACTCTGTATG
15877413 C
1 C
15877414 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCTGTATG
Found at i:15884013 original size:26 final size:26
Alignment explanation
Indices: 15883984--15884040 Score: 96
Period size: 26 Copynumber: 2.2 Consensus size: 26
15883974 TCCGGTTCGA
* *
15883984 GCTTAGATTGGGAATGAACTTCGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
15884010 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
15884036 GCTTA
1 GCTTA
15884041 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.26, C:0.16, G:0.26, T:0.32
Consensus pattern (26 bp):
GCTTAGACTGGGAATGAACTCCGTAT
Found at i:15884884 original size:26 final size:26
Alignment explanation
Indices: 15884855--15884905 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15884845 CCCGTCCGAT
*
15884855 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15884881 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
15884906 ACCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15887546 original size:26 final size:26
Alignment explanation
Indices: 15887517--15887569 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15887507 CCGGTCCGAT
15887517 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15887543 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15887569 C
1 C
15887570 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15889269 original size:26 final size:26
Alignment explanation
Indices: 15889240--15889292 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15889230 CCGGTCTGAT
15889240 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15889266 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15889292 C
1 C
15889293 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15890162 original size:26 final size:26
Alignment explanation
Indices: 15890126--15890177 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15890116 CGATCTGAGT
15890126 TTAGACTGGGAATGAACTCCATATGC
1 TTAGACTGGGAATGAACTCCATATGC
*
15890152 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCATATGC
15890178 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGC
Found at i:15891050 original size:26 final size:26
Alignment explanation
Indices: 15891014--15891066 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15891004 CGGGTCCAAT
15891014 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15891040 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15891066 C
1 C
15891067 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Done.