Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 101 of 190
Found at i:15891739 original size:893 final size:884
Alignment explanation
Indices: 15879888--15889165 Score: 8607
Period size: 859 Copynumber: 10.5 Consensus size: 884
15879878 GGTCAGATCG
*
15879888 CGGGATGCGCAAG-CGTGGATCGATAGGGTGGTAGGTGGG-TTAGGCACATCTTCATATTTCTAC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15879951 ATGCC-ATGCTATTTTTATGGCTTGTAAATTCAT-CAATGGTCCCTTTAAGCCTTCAC-TGCGAG
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC-TTAAGCCTTCACGTG-AAG
*
15880013 TTTCATGGCAAGACGACTCATTTTCTA-TTTTCATGA-TTTT-AAACTTTTTACGGTTTGGGATT
129 TTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATT
* * *
15880075 TTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGT
194 TTTTAAAA-TTTTTTCG-AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
15880140 TGGCATTCACAAAAAAATTAAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAA
257 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* *
15880205 AGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
322 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTT
* *
15880270 TAAGGGGGTGTGGGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAG
387 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * ** * *
15880335 CACCCATCGAACATCATGTGCGCACACCCCCCTCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
452 CACCCATCGCACATCACGTGCGCACA---CCC-CGGGCCCCCCTAATCG-C-CAATCCC-A---C
* ** * * *
15880400 GTCGGTTAGGTTCCCCGGCGATGCTCCGACGATGGTGCCTCGGTGAAGAAAAATACGGCA-CAAG
507 --CGGTCAGGTTTTCAGGCGATGCTCCGGCGATGGTGCC-CGATGAAGAAAAATACGGCACCAA-
* * * * * * *
15880464 CACATGCCCGAGCCTAGCATGTGCTGTCGCAACCCTCGGTCTGATCCGATCTTAGACAGGGAATG
568 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATG
** * * *
15880529 AACTCCGTATGCTTAGACTAAGAATGAACTCTGCATGCCTAAGTCAACCCACGAAATGAGCGTGC
633 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * ** * * * * * * *
15880594 AGGCGCTCAGCCGGCTAGAGGGGTGGGATGC-ACGAGCCGGGGATCGGTCGGGTCCCCCTCTACG
698 GGGTGCTCAATCGACCAGAGGGGCGGGATGCGA-AAG-CGAGGATCGCT-GGGTCCCCCTCTATG
** * * ** * *
15880658 TGCTACCGATCCTGCTGCCACAACCCTTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTTCGT
760 TGCTGTCGATCCTGCTGCCGCAACCC-TCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGT
** * * ** *
15880723 ATGCCTAAGCCAACCGATGAAAC-AAACGGGCGGACAGACGGGCGGGTACTACATCGGCCAAATA
824 ATGCCTAAGCCAACCGA--AAACGAAGTGGGCGG---G-CGAGCGGGCACTACGCCGGCCAAAGA
15880787 GA
883 GA
* * **
15880789 CGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTAT
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
15880854 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* ** *
15880919 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGTTCGAGATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * *
15880984 TTAAAATTTTTTCGGAAAGAGTTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTG
196 TTAAAATTTTTTC-G-AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
15881049 GCTTGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACTATTTTGAAAAAA
259 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA-TTTGAAAAAA
** *
15881113 GTGTCTTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
323 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT
*
15881178 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
388 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * *
15881243 ACCCATCGCACATCATGTGCGCACA---C---CCCCCC-GATCGCCAGAACCCTAATGCC-ATC-
453 ACCCATCGCACATCACGTGCGCACACCCCGGGCCCCCCTAATCGCCA-ATCCC--A--CCGGTCA
* * * ** * * *
15881299 GG--TT-A-G-G-TTCTCTGGCGATGGTGCTCCGACGAAGAAAAATGTGACCCCAGCACATGCCC
513 GGTTTTCAGGCGATGCTCCGGCGATGGTGC-CCGATGAAGAAAAATACGGCACCAACACATGCCC
* *
15881358 GAGCCCAGCATCTGCTGCCACAA-CC-C--T-CGG-----TC-----C---G---G---TCCG-A
577 GAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTA
* * * **
15881398 T-CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGTGGGCACTCA
642 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCA
* ** * * ** *** *
15881462 GTCGACCAGAGGGATGGGATGCGCAAGCCAGGGATCGCTCGGGTCTTCCTCTGCATACTG-CTGA
707 ATCGACCAGAGGGGCGGGATGCGAAAGCGA-GGATCGCT-GGGTCCCCCTCTATGTGCTGTC-GA
* * ** * *
15881526 TGCTGCTGTCGCAACCCTCAATCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGC
769 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
15881591 CAACCGACGGAACGAGCAGGTGGGTGGGCGGGCAGGCACTACGTCGGCCAAAGAGA
834 CAACCGA--AAACGA--A-GTGGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
* *
15881647 CGGGATGGGCAAGCCGTGGATGGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * * * *
15881712 GTGCCAATGCCATTTTCATGGCTTGTAAATTAATGCAATGGTCCTTTAAGCCTTCACGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* ** ** ***
15881777 TCATGGCAAGATGACTCATTTT-TATTTTTCACAATTTTTGAAACTTTTTGTGGTTTAAGATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* *
15881841 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTACTTTTT-TT
196 TTAAAATTTTTTC-G-AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTT
* * * *
15881905 GGCATGCACAAAAAAATTCAGCTAAAAAGTCGAAGTGTATAATATTTTGTGACTATTTGAAAAAA
258 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
15881970 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCCTT
323 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT
* *
15882035 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACCAGC
388 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * * * **
15882100 ACCCATCTCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCATTGGAACCCCAATTCTGCCG
453 ACCCATCGCACATCACGTGCGCACA--CCCCGGGCCCCCC--T-A----ATCGCCAATCCCACCG
* * * ** * * * *
15882165 GTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAC
509 GTCAGGTTTTCAGGCGATGCTCCGGCGATGGTG-CCCGATGAAGAAAAATACGGCACCAACACAT
*
15882230 GCCCGAGCCCAGCATGTGCTGCCGTAACCCT---T--GG-----TC-----C--GG--T---CT-
573 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTC
* * * *
15882272 -G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACGCATGAAATGAGCGTGCGGGCG
638 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTG
* ** * * * ** *
15882334 TTCAGCCGGCCAGAGGGGCGGGATGC-ACAAGCTTG-GGATCGGTCGGGTCCCCCTTTGCGTGGT
703 CTCAATCGACCAGAGGGGCGGGATGCGA-AAGC--GAGGATCGCT-GGGTCCCCCTCTATGTGCT
* * * * * * * * *
15882397 ATTGATCCTACTGTCGCAACCCTCAGTCCGATCCGATCTTAGATTGGGAATGAACTCTGTATGCC
764 GTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * * * *
15882462 TAAACCAACCGACGAAATG-AGTGGGAGGGCGGGCGGGCAGGCACTACACCGTCTAGAGAGA
829 TAAGCCAACCGA--AAACGAAGT----GGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
* * *
15882523 CGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTAC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15882588 ATGCCAATGCCATTTTTATGCCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* *
15882653 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* *
15882718 TTAAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTG
196 TTAAAATTTTTTC-G-AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * *
15882782 GCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTATAAGA-TTTGTCACCATTTGAAAGAAG
259 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * * *
15882846 TGTCCCCATTTGAGGCACTTTAGTGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
324 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTA
15882911 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
389 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * ** * *** * **
15882976 ACCATCGCACATCATGTGTGCACACCCCCCGGCCCCCCCGATCGTCGGAA-CCCAAATG-CCGCC
454 CCCATCGCACATCACGTGCGCACA-CCCCGGGCCCCCCTAATCG-C-CAATCCCACCGGTCAGGT
** * ** * * * * *
15883039 GGTCA-G-G-TTCTCTAGCGATGGTGCCCCGGTGAAGAAAAATGCGACACCAGCAAATGCCCGAG
516 TTTCAGGCGATGCTCCGGCGATGGTG-CCCGATGAAGAAAAATACGGCACCAACACATGCCCGAG
* ** * *
15883101 CCCATCATGTGCTATCGTAA----CGCT-CGG-------TT---C---G---G---TCCG-AT-C
580 CCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGC
* * * ** **
15883140 TTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCACTCAGCC
645 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAATC
* * * * * *** *
15883205 TG-CCAGAGGGACGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTTCCGCGTGCT-ACTGATC
710 -GACCAGAGGGGCGGGATGCGAAAG-CGAGGATCGCT-GGGTCCCCCTCTATGTGCTGTC-GATC
* * * * * *
15883268 CTGGTGCCACAACCCTCAGTCTGGTCTGATCTTAGACTGCGAATAAACTCCGTATGCCTAAGCCA
771 CTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15883333 ACCGATGAAACG-AGTGGGC--G-G-GCGGGCGCTACGCTGGCCAGAGAGA
836 ACCGA--AAACGAAGTGGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
*
15883379 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGA
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15883444 ATTCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCACGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * ** * *
15883509 TCATGGCAAGACGACTCGTTTTTGTATTTTTCACGATTTTCAAAACTTTTTTCGGTTCGAGATTT
131 TCATGGCAAGACGACTC-ATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTT
* * *
15883574 TTTAAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTT
195 TTTAAAA-TTTTTTCG-AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* *
15883639 GGCATGCATAAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
258 GGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* ** *
15883704 AGTGTCCCCATTTCAGACACATTAATGGCTACTACCAGCAAACCTGTAAAATCTCAAATGCTCTT
322 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTT
*
15883769 TAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAG
387 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * * ** ***
15883833 CACCCATCACACATCATGTGTGCACACCCCCCCGACCCCCCCGATCG-C--TGGAACC--TCA--
452 CACCCATCGCACATCACGTGCGCACA--CCCCGGGCCCCCCTAATCGCCAATCCCACCGGTCAGG
* * * ** *
15883891 -----ATGC----CGCCGGTC-A-GGTTCTCCGACT-AAGAAAAATGTGGCAGCAACACATGCCC
515 TTTTCAGGCGATGCTCCGG-CGATGGTGC-CCGA-TGAAGAAAAATACGGCACCAACACATGCCC
* * * * * * * * * *
15883944 GAGCCCAGCATGTGTTACCACAACCCTTGGTCCGGTTCGAGCTTAGATTGGGAATGAACTTCGTA
577 GAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTA
* *
15884009 TGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
642 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCA
** * * * * * ** * * *
15884074 GCCGACCAAAGGGGCAGGATGC-ATAAGCTGGGGATTGGTCGGGTCCCCCTCTGCGTGCCGCCAA
707 ATCGACCAGAGGGGCGGGATGCGA-AAGC-GAGGATCGCT-GGGTCCCCCTCTATGTGCTGTCGA
* * * * * * *
15884138 TCCTGTTGCAGCAACCCTCGCTCCGATCCAATCTAAGACTGGGAATGAACTCCGTATGCCTAAGC
769 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
15884203 CAACCGATGAAACG-ATTGGGC--G-G-GCGGGCACTACGTCGGCCAGAGAGG
834 CAACCGA--AAACGAAGTGGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
* *
15884251 TGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * * *
15884316 GTGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACATGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * *** * *
15884381 TCATGGAAAGATGACTCGTTTTATATTTTTCATGATTTCCAAAACTTTTTACGGTTTGGCATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * *
15884446 TTAAAATTTTTTCGGAAGGAGTTTT-CACCCCAAACTTTGTAGACATGATCCTTGTATTTTTGTT
196 TTAAAATTTTTTC-G-AGGAGTTTTGGA-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
*
15884510 GGCATGCACAAAAAAATTCAGCTAAAAACTCGACGTGTACAAGATTTTGTGACCATTTGAAAAAA
258 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
15884575 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTTAAATCTCAAATGCTCTTT
323 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT
** *
15884640 AAGGGGGTGTGAGTTAGCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTGCCAGC
388 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * * *
15884704 AACCATCGCACATCATGTGCGCACACCCCCTCGACCCCCTCT-ATCGTCAGA----ACC--CCA-
453 ACCCATCGCACATCACGTGCGCACA-CCCC-GGGCCCCC-CTAATCGCCA-ATCCCACCGGTCAG
* * * * * * * *** * *
15884761 ------ATGC--CGC-CAGTC-A-GGTTCTTCGACGAAGAAAAATGTTGCAGCAGCACATGCCCG
514 GTTTTCAGGCGATGCTCCGGCGATGGTGC-CCGATGAAGAAAAATACGGCACCAACACATGCCCG
* * * * * * *
15884815 AGCCCAGCATGTGTTACCACAACCCTCGGTCCCGTCCGATCTTAGATTGGGAATGAACTCCGTAT
578 AGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTAT
* **
15884880 GCTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAA
643 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAA
* * * * * * * * * * *
15884945 -CCAGCTA-AGGGACGGGATGCGCAAGCTGGGGATTGGCCGGGTCCCCCTCTACGTGCCGCCAAT
708 TCGA-CCAGAGGGGCGGGATGCGAAAGC-GAGGA-TCGCTGGGTCCCCCTCTATGTGCTGTCGAT
* ** * * *** * *
15885008 CCTGTTGTAGGAACCCTCGATCCAATCCAATCTAAGACTGGGAATGAACTCCGTATGCCTAAGCC
770 CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
15885073 AACTGATGAAACG-AGTGGGCGGGCGGGAGGGCACTACGTCGCCCAGAGAGG
835 AACCGA--AAACGAAGTGGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
* **
15885124 CGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAT
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * *
15885189 GTGCCAATGCCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
15885254 TCATGGCAAGACGACTCATTTTTTATTTTTCATGATTTTTGAAACTTTTTGCTGTTCGGGATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * * * *
15885319 TTAAAATTTTTTCTTAAGGAGTTTT-CACCCCAAACTTCGAAGATGTGATCCTTGTATTTTTTTT
196 TTAAAATTTTTTC--GAGGAGTTTTGGA-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
15885383 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
258 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
15885448 GTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGTAAACCTATAAAATCTCAAATGCTCTTT
323 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT
* * * *
15885513 AA-GGGGTATGAGTTCTCGAGGCTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTGCCAGC
388 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
15885577 ACCCATTGCACATCATGTGCGCACACCCCCCGGCTCCCCC-GATCGCCAGAACCCGAGTGCCGCC
453 ACCCATCGCACATCACGTGCGCACA-CCCCGGGC-CCCCCTAATCGCCA-ATCCC-A------CC
* * * * *
15885641 GGTCAGGTTCTCCA-GTGATGCTCCGGTGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCAC
508 GGTCAGGTT-TTCAGGCGATGCTCCGGCGATGGTG-CCCGATGAAGAAAAATACGGCACCAACAC
* * * * * * *
15885705 ATGCCTGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGTTCCGATCATAGACTGGGAATGAAC
571 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAAC
* * *
15885770 TCCGTATCCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGG
636 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * *
15885835 CGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGACGGGGATCAG-TCGGGTCCCCACT-TCA--T
701 TGCTCAATCGACCAGAGGGGCGGGATGCGAAAG-CGAGGATC-GCT-GGGTCCCC-CTCT-ATGT
* * * * * ** *
15885896 GCTGCCGATCTTGCTGTCACAACCCTTGGT-TCGGTCTAATCTTCGACTGGGAATGAACTCCGTA
761 GCTGTCGATCCTGCTGCCGCAACCCTCGGTCT-GGTCCGATCTTAGACTGGGAATGAACTCCGTA
** * * * * *
15885960 TATCTAAGCCAACCGACGAAACGAGTGGGCGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGA
825 TGCCTAAGCCAACCGA--AAACGA-------AGTGGGCGGGCGAGCGGGCACTACGCCGGCCAAA
15886025 GAGA
881 GAGA
* * *
15886029 TGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATTTTTTTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15886094 GTGCCAATGCCATTTTTATGGCTTGTAAATTTATACAATGG-CCCTTTAAGCCTTCACGTGAAGT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC-TTAAGCCTTCACGTGAAGT
* * ** * **
15886158 TTCATGGCAAGACGACTCGTTTTTTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCAAGATTT
130 TTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTT
* * * * *
15886223 TTTAAAATTTTTTCAGTAAGAGTTTTGGCCCCAAACCTGGTAAACGTGATCCTTGTATTTTTTTT
195 TTTAAAATTTTTTC-G-AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * * *
15886288 AGCATGCAAAAAAAAATTCAGCTAGAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
258 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
15886353 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTAT---A----AAAT-CTC---
323 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT
* *
15886407 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGC
388 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * * ** * *
15886472 ACCCATCACACATCATGTGCACACACCCCCCCGACCCCCCCGATCGTCGGAA-CGTCAATGCCGT
453 ACCCATCGCACATCACGTGCGCACA--CCCCGGGCCCCCCTAATCG-C-CAATC--CCA--CC--
* * * ** * * * * * *
15886536 TGGTTAGGTTCTCCGATGATGCTTCGGCGATGGTGCCCCGACGAAGACAAATGCAGCACCAGCAC
508 -GGTCAGGTTTTCAGGCGATGCTCCGGCGATGGTG-CCCGATGAAGAAAAATACGGCACCAACAC
* *
15886601 ATGCTCGAGCCCAGCATGTGCTGCTGCAA-CC-C--T-CGG-----TC-----C-------G-A-
571 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAAC
* *
15886642 TCC-AAT-CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
636 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
** * * * * * * * * * **
15886705 CCCTC-AGCAGGCCAAAGGGGTGGGATGCGCAAGCTGGGGATCGGCCGGCTCCCCCTTTGCGTGC
701 TGCTCAATC-GACCAGAGGGGCGGGATGCGAAAGC-GAGGATC-GCTGGGTCCCCCTCTATGTGC
** ** * * * * * *
15886769 TACCGATCCCACTGCTGCAACCATCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCAGTATGC
763 TGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
** ** ** * * * *
15886834 CCGAGCCAACC---AACGAAACGAACGGGCGGGCGGGCACTATGCTGGCCAGAGAGA
828 CTAAGCCAACCGAAAACGAAGTGGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
* * * * * *
15886888 CAGCATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCAAATCTTCATATTTCTAC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15886953 ATGCCAATGCCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* *
15887018 TCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * * * *
15887083 TTAAAATTTTTTCTTAAGGAGTTTT-CACCCCAAACTTCGAAGATGTGATCCTTGTATTTTTTTT
196 TTAAAATTTTTTC--GAGGAGTTTTGGA-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
*
15887147 GGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAGA-TTTGTGACCATTTGAAAAAA
258 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * * * *
15887211 TTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAACTGTAAAATCTCAAATGTTCTCT
323 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT
* * * *
15887276 AAAGGTGTGTGAGTTCTCAAGGTTTGATGAGAGATA-GGGGCCAATATAAGGGCCAAGTACCAGC
388 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* ** * **
15887340 ACCCATCGCACATCATGTGCGCACACCCCGCCCGGCCCCCCCGATTGTCGGAACCCCAATGCCGT
453 ACCCATCGCACATCACGTGCGCACACCCCG---GG-CCCCCC--TAATC-G----CCAATCCCAC
* * * * * * ** *
15887405 CGGTCAGGTTCTCCGACGATGCTCCGACGATAGTGCCCCGGTGAAGAAAAATGTGACACCAACAC
507 CGGTCAGGTTTTCAGGCGATGCTCCGGCGATGGTG-CCCGATGAAGAAAAATACGGCACCAACAC
* *
15887470 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCAT-GGTCCGGTCCGATCTTAGACTGGGAATGAA
571 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCC-TCGATCCGGTCCAATCTTAGACTGGGAATGAA
*
15887534 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGG
635 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * * * ***
15887599 GTGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCTTCTGCATGC
700 GTGCTCAATCGACCAGAGGGGCGGGATGCGAAAG-CGAGGATCG-CTGGGTCCCCCTCTATGTGC
* * * * *
15887664 TGTCGATCCTGCTACCACAACCCTCGATCTGGTCCTATCTTAGACTGGGAATCAACTCCGTATGC
763 TGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
15887729 CTAAGCTAACCGACGAAACG-AGCGGGCGGGCTG-GCGGGCGGGACTACGCTGGCCAGATAGA
828 CTAAGCCAACCGA--AAACGAAGTGGGCGGGC-GAGCGGGC---ACTACGCCGGCCAAAGAGA
* * *
15887790 CGGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGT
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * * **
15887855 GTGCCAATGCCATTTTTATGGCTTGTAAATCCATATAATGGTTGCTTAAGCCTTCACGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * * *
15887920 TCATGGCAAGACGACTCATTTTCTATTTCTCATTATTTTCGAAACTTTTTGCGATTCGAGATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * *
15887985 TTAAAATTTTTTCGAAAGTACTTTTGG-CCCAAACTTGGTAGACGTGATCCTT-TCTTTTTGTTG
196 TTAAAATTTTTTCG--AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * *
15888048 GCATGCACAAAACAATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGATCATTTGAAAAAAG
259 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
15888113 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACATGTAAAATCTTAAATGCTCTTTA
324 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTA
* *
15888178 AGGGGGTGTGAGTTCTCGAGGTTTGATGATGGATA-GGGGCCAATATAAGGGCCAAGTACGAGCA
389 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * * * *
15888242 CCCATCACACATCATGTGCGCACACCCCCTCGGCACCGCCAATCATCGGAACCCCAATGCCGCCG
454 CCCATCGCACATCACGTGCGCACA-CCCC-GGGC-CC-CC-CTAATC-G----CCAATCCCACCG
* * * * * * * * *
15888307 GTCAGGTTCTCCGACGATGCTCTGGCGATTGTACCCCGACGAAGAAAAATGCGACACCAACACAT
509 GTCAGGTTTTCAGGCGATGCTCCGGCGATGGT-GCCCGATGAAGAAAAATACGGCACCAACACAT
* * * * **
15888372 GCCTGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCAATCTTGGACCAGGAATGAACTC
573 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTC
** * * *
15888437 CCAATGCTTAGACTGGGAATGAACTCTGTATGCCTATGTCAACCCACGAAACGAACGTGCGGGTG
638 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTG
* * * * * * * ***
15888502 CTTAGTCGGCCTGAGGGGCGGGATGC-ACAAGCCGGGGATCGGTCGGGTCCCCCCCCTCCATGCT
703 CTCAATCGACCAGAGGGGCGGGATGCGA-AAG-CGAGGATCGCT-GGGT-CCCCCTCTATGTGCT
* * * *
15888566 GCCGATCCTGCTACCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
764 GTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * *
15888631 TAAGCCAACCG---ACGAAATGAGCGGGAGGGCGGGCACTACGTCGGCCAGAGAGA
829 TAAGCCAACCGAAAACGAAGTGGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
* * * * *
15888684 TGGGATGCGCAAGTCGCGGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTCC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15888749 ATGCCAATGCCATTTTTATGGCTTGTAAATTTATACAATGGTCTCTTAAGCCTTCACGTGAAGTT
66 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * **
15888814 TCATGGCAAGACAATTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGGCCGGGATTTT
131 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * * *
15888879 TTAAAATTTTTGCGGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGAATTTTTTTTG
196 TTAAAATTTTTTC-G-AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * *
15888944 GCATGCACAAAACAATTCAGCTAAACACACGAAGTGTACAAGATTTTGTGACCATATGAAAAAAG
259 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
15889009 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTA
324 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTA
*
15889074 A-GGGGTGTGAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
389 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
*
15889138 CCCATCGCACATCATGTGCGCACACCCC
454 CCCATCGCACATCACGTGCGCACACCCC
15889166 CCCGGCCCCC
Statistics
Matches: 7190, Mismatches: 894, Indels: 592
0.83 0.10 0.07
Matches are distributed among these distances:
845 1 0.00
846 47 0.01
847 5 0.00
848 2 0.00
849 1 0.00
850 2 0.00
851 3 0.00
855 1 0.00
856 159 0.02
857 310 0.04
858 390 0.05
859 529 0.07
860 106 0.01
861 6 0.00
862 7 0.00
863 3 0.00
864 240 0.03
865 13 0.00
866 11 0.00
867 8 0.00
868 55 0.01
869 250 0.03
870 465 0.06
871 200 0.03
872 390 0.05
873 451 0.06
874 17 0.00
875 172 0.02
876 501 0.07
877 47 0.01
878 1 0.00
879 2 0.00
880 1 0.00
881 2 0.00
883 3 0.00
884 3 0.00
885 58 0.01
886 6 0.00
887 1 0.00
891 4 0.00
892 4 0.00
893 8 0.00
894 216 0.03
895 317 0.04
896 288 0.04
897 243 0.03
898 40 0.01
899 20 0.00
900 292 0.04
901 276 0.04
902 239 0.03
903 26 0.00
904 71 0.01
905 387 0.05
906 52 0.01
907 238 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (884 bp):
CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
TTAAAATTTTTTCGAGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAG
GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
CATCGCACATCACGTGCGCACACCCCGGGCCCCCCTAATCGCCAATCCCACCGGTCAGGTTTTCA
GGCGATGCTCCGGCGATGGTGCCCGATGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGC
ATGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAATCGACCAG
AGGGGCGGGATGCGAAAGCGAGGATCGCTGGGTCCCCCTCTATGTGCTGTCGATCCTGCTGCCGC
AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAAACG
AAGTGGGCGGGCGAGCGGGCACTACGCCGGCCAAAGAGA
Found at i:15894887 original size:26 final size:26
Alignment explanation
Indices: 15894851--15894903 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
15894841 CCGGTCCGTT
15894851 CTTAGACTGGGAATGAACT-TCGTATG
1 CTTAGACTGGGAATGAACTCT-GTATG
15894877 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15894903 C
1 C
15894904 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15895777 original size:26 final size:26
Alignment explanation
Indices: 15895748--15895800 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15895738 CCGGTCCGAT
15895748 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15895774 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15895800 C
1 C
15895801 CTAAGTCAAA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15896222 original size:901 final size:898
Alignment explanation
Indices: 15894032--15903777 Score: 12274
Period size: 897 Copynumber: 11.0 Consensus size: 898
15894022 GAATCTATCT
* * * * *
15894032 AGTCAACCCATGAAACGAGCATG-GGGCGTTCAATCCGGCCAGAGGGG-GAGATGCGCAAGCC-G
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTC-AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * * * *
15894094 GGATCGATC-AGTCTCCTCCACTG-GTGCTACCGAT-CTACTGCCGCAACCTCTTGGTCCGGTC-
65 GGATCGACCGGGTC-CC-CCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC-CTCGGTCCGGTCT
* * * *
15894155 GATCTTAGACTGAGAATGAA-TTCG-ATCGCCTAAGCGAACCGACG-AACGAGCGGGCGGTC-GG
127 GATCTTAGACTGGGAATGAACTCCGTAT-GCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGG
* * * * *
15894216 CGGCGGCACT--GACTGCC--A-AGATGGGATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGG
190 C-G-GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
** * *
15894276 GTTTAGGCACATCTTCATATTTCTGTGTGGCAATGCCATTTTTATGACTTGTAAATTCATACAAT
253 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
15894341 TGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
318 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
** *
15894406 TGAAACTTTTTGA-GGTTCAAGATTTTTTAAAATTTTTTC-AGAAGGATTTTTGGCCCCAAACTT
383 TGAAACTTTTT-ACGGTTCGGGATTTTTTAAAATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTT
* *
15894469 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGATGTGT
446 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
** *
15894534 ACAAGATTTTGCCACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTA-TAGGCAG
511 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT-GGCAG
* *
15894598 CAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCGAGGTTTGATGAGGGATAG
575 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
*
15894663 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCTCGG-CC
640 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCC
* * * * * * *
15894727 CCCCGATCGTC-GAAACCCAGTGCCGTCGGTTAGGTTCTTCGATGATGCT----C-----T----
704 CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCC
* * *
15894778 -GACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTC
769 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * *
15894842 CGGTCCGTTCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTA
834 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* **
15894907 AGTCAACCCACGAAACGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCATAAGCCGGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* ** ** ** *
15894972 GATCGACCAGGTCCCCCTCTGCGTGCTGTTGATCCTATTGCCGCAACCCTCGGTGTGATCTGATC
66 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * *
15895037 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGA---ACGGGCGGGCGGGCA
131 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCA
** * *
15895099 CTACGCAAGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGCGGTAGGTGGGTTTAGGC
196 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
15895164 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
261 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* *
15895229 AAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAAGATTTTTGAAACTT
326 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * * * *
15895294 TTTACGATTCAGGATTTTTTTAAATTTTTTCGAAAGTAGTTTTGG-CCCAATACTTGCTAGACGT
391 TTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAA-ACTTGGTAGACGT
* * * * *
15895358 GATACTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCAAAAAATTTGAAGTGTACAAGATTT
455 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
** *
15895423 TGCCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTATTGGCTACTGGCAGCAAACCTGTA
520 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* * *
15895488 AAATCTCAAATCCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTCATGAGGGATAGGGGGCCAATA
585 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* ** *
15895553 TAAGGGCCAAGTACCAGCACCCTTAACACATCATGTGCGCACAGCCCCCCCGGCCCCCCCGATTG
650 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCG
* * * *
15895618 CCGGAACCCCAATGTCGCCGATCAGGTTCTCTGGTGATGCTCCGGCGATGGTGCCCC-AGTGAA-
713 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGA-CGAAG
* * * * *
15895681 AAGAAATGCAGCACCAGCACATGCTCGAGCCCAACATGTGCTGGCGTAACCCTCGGTCCGGTCCG
777 AA-AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
15895746 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
841 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
15895804 AGTCAAACCACGAAATGAGCGTGCGGCCGCTCAGCCGGCCTA-AGGGGCCGGATGCGCAAGCCAG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC-AGAGGGGCGGGATGCGCAAGCCGG
* * * * * *
15895868 GGATTGGCCGGATCCCCCTCTGCGTGCTGTCGATGCTGCTGCCACAACCCTCGGTCCGGTCCT-A
65 GGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGT-CTGA
* * *
15895932 TCTTAGGCTAGGAATGCACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGTGCGGGCGGGCGG
129 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG-GCGGGCGGGCGG
* * * *
15895997 GCACTACGTCAGCCAGAGAGACGGGATTCGCAAGCCGTTGATCGAT-GTGGTGGTAGGTGGGTTT
193 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG-GGTGGTAGGTGGGTTT
* * **
15896061 AGGCACATCATCATATTTCTGCATGCCAATGCCATTTTAATGGCACGTAAATTCATACAATGGTC
257 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
15896126 CCTTAAACCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTTGAA
322 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* ** * * * *
15896191 ACTTTTTACGATTTAGGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGTCCAAAACTTGCTAGA
387 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * *
15896256 CGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCAAAAAATTTGAAGTGTACAAGA
452 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
** * * * *
15896321 TTTTGCCACCATTTGGAAAAAGTTTCCCCATTTCAGACACTTTAATTGCTACTGGCAACAAACCT
517 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
*
15896386 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
582 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
** * * *
15896451 ATATAAGGGTGAAGTACCAGCACCCATCACACATAATGTGCGTGCAC-CCCCCCCGCCCCCCCGA
647 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC--GCACACCCCCCGGCCCCCCCGA
* * * *
15896515 TTGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCTGGCGA
710 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGA
* * * * *
15896580 AGAAAAATGCAGCACCAGCACATGCTCGAGCCCAGCATGTGCTGGCGCAACCCTCAGTCCGGTAC
775 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCC
*
15896645 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAACGAACTCCGTATGCCTA
840 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
15896704 AGTCAAACCACGAAATGAGCGTGCGGGCGCTCAGTCGGCCTGAGGGGCGGGATGCGCAAGCCGGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
** * * * *
15896769 GATCGGTCGGGTCCCCCTCTACGTGCTGCCGATGCTGCTGCCGTAACCCTCGGTCCGGTTTGATC
66 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * *
15896834 TTAGGCTAGGAATGAACTCCGTATGCCTAAGCCATCCGACG-AA--A----------------CA
131 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCA
* *
15896880 --A-GCCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGAT-GTGGTGGTAGGTGGGTTTAGG
196 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG-GGTGGTAGGTGGGTTTAGG
* * **
15896941 CACATCCTCGTATTTCTGCATGCCAATGCCATTTTTATGGCACGTAAATTCATACAATGGTCCCT
260 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * *
15897006 TAAGCATTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATCTTTCATGATTTTTGAAACT
325 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
* * * * ***
15897071 TTTTGCTGTTCGGGACTTTTTAAAATTTTTTTGAAAGGAGTTTTGGAAACAAACTTGGTAGACGT
390 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
** *
15897136 GATCCTTGTATTTTTGTTGGCATGCGTAAAAAAATTCAGCTAAAAACTCGAACTGTACAAGATTT
455 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
15897201 TGTGACCATTTGAAAAAAGAGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTA
520 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
15897266 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATA
585 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * *
15897331 TAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGTGCACACCCCCTGGCCCCGCCGATCGCC
650 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCC
* ** * **
15897396 AGAACCCCAATGCCGTTGGTCAAGTTCTCCGGTGATGCTCCGATGATGGTGCCCCGACGAAGAAA
715 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAA
* * *
15897461 AATGCGGCACCAGCACATGCCCGAGCCTAGCATGTACTGCTGCAA-CC-C--T-C-G---G-TC-
780 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCT
15897515 ----C---G-AT---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTA
845 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * * *
15897554 AGTCAACCAACAAAACGAGCGTGTGGGTGCTTAGTCGGCCAGA-GGGCTGGGATGTGCAAGCCGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC-GGGATGCGCAAGCCGG
** * * * *
15897618 GGATCGACCATGTCCCCTTCTGCATGCTGCCGATCCTGCTGCCGTAACCCTTGGTCCGGTCTGAT
65 GGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGAT
* * ***
15897683 CTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGAATAGCGGGCGGG
130 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG-CGGGCGGGCGGG
* **
15897748 CACTACGCCGGCTAGAGAGACGGGATTTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
194 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
15897813 GCACATCTTCATATTTCTGCATGCCAATACCATTTTTATCGCTTGTAAATTCATACAATGGTCCC
259 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * **
15897878 TTAAGCCTTCACGTGAAGTTTCATGGCTAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAC
324 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * * *
15897943 TTTTTATGGTTCGAGATTTTTAAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
389 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * *
15898008 TGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGC-GAAAACTGGAAGTGTACAAGATT
454 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * *
15898072 TTGTGACCATTT-CAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCAGCAAACCTAT
519 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15898136 AAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
584 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* *
15898201 ATAAGGGACAAGTACCAG----CA-C-C-CATCA------CACACCCCCCGGCCCCCCCGATCGT
649 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
** ** * * * * *
15898253 CGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGGTCCGGCTATGGTGGCCTGACGAGGAA
714 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAA
* * * * * * *
15898318 AAGTGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCATCAGTCCAGTCTGATC
779 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC
*
15898383 TTAGACTGGTAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
844 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
15898438 AGTCAACCCATGAAATGAACGTTCGGGCGCTCAGCCGGCCAGATGGGCGGGATGCGCAAGCCGGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * * * * * *
15898503 GATCGACCGAGTCCCCCTCTGCGTGTTGTCGATCCTGCTACCACAACCATTGATCTGGTCTGATC
66 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * * * ** * *
15898568 TTAGAATAGGAATGAACTCCATATACCTAAGCCAACTAATGAAACGAGCAGGAGGGCGGGCAGGC
131 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-----GGCGGGCGGGC
* * *
15898633 GGGCACTAC-ACAGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
191 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * * *
15898697 TAGGCATATCTTCATATTTCTACATGCCAATACCATTTTTATGGCTTGTAAATTCAGACAATGGT
256 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * **
15898762 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGATTTTCAA
321 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * * *
15898827 AACTATTTACGGTTCGGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACCTAGTAG
386 AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAG
* * *
15898892 ACGTGATCCCTGTATTTTTGTTGGCATTCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACAAG
451 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
*
15898957 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACC
516 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * **
15899022 TGTAAAATCTCAAATGTTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAAAAGGGATAGGGGGCC
581 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * *
15899087 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCACGTGTGCACACCCCCCGGCCCCCCTGAT
646 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
* * * ** *
15899152 CGCCAGAACCCCAACGCCGCCGGTCAGGTTCTCTGACGATGCTCCGGCGATGGTGCACCGACGAA
711 CGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAA
* * * * *
15899217 GAAAAATGTGACACAAGCACATGCCCGAGCCCAGCATGTGCT-CTCGTAACCCTCGGTCTGGTCC
776 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC-CGCAACCCTCGGTCCGGTCC
* *
15899281 AATCTTAGACTGGGAATGAACTCCATATGCTTAGACT-GGAATGAACTCCGTATGCCTA
840 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
15899339 AGTCAACCCACGGAACGAGCGTGCGGGCACTCAGTCGGCCAGAAGGGCGGGATGCGCAAGTCGGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * ** * * * * * *
15899404 GATCAACCGAGTCCCCCTCTGTATGCTGCCGATCCTACTACCGCAACCCTTGGTCTGATTTGATC
66 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * * * * * *
15899469 TTAGACTAGGAATAAATTCTGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCGAGCAGGC
131 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-CGGCGGGCGGGCGGGC
*
15899534 ACTACGCCGGCCAAAGAGACGGGATGCGCAA-CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
195 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* * *
15899598 CATATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAAGGGTCCCT
260 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
*
15899663 TAAGCCTTAACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
325 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
* * *
15899728 TTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
390 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* *
15899793 GATCCTTGTATTTTTTTTGGCATTG-ACAAAAAAATTCTGCTAAAAACTCGAAGTGTACAAGATT
455 GATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* *
15899857 TTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAGCAAACCTGT
519 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15899922 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAAT
584 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * * **
15899987 ATAAGTGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCTGGCCCTCCCGATCAT
649 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
* * * *
15900052 CGGAACCCCAATGCCGCCGATCAGGTTATCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAA
714 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAA
* * * *
15900117 AAATGCGGCACCAGCACATGCCCGAGCCCCGCATGTGCTGCCGTAACCCTCGGTTCGGTTCGATC
779 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC
** *
15900182 TTAGACTGCCAATGAACTCCGTATGCTTAGACTGGG-ATGAACTCTGTATGCCTA
844 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
15900236 AGTCAACCCACGAGACGAGCATGCGGGCGCTCAGCC-GCCAGAGGGGCGGGATGCACAAGCTGGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* ** * * * *
15900300 GATCGATCGGGTCTGCCTCTGCGTGCTCCCAATCCTGCTGCCACAACCCTCGGCCCGGTCTGATC
66 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * * * * * *
15900365 TTAGACTGGGAATTAACTTCGTATGCTTAAGCCAACTGACTAAACGA---GCGGGCGGACGGGTA
131 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCA
* * * * * *
15900427 GTACGTCGACCAAAGAGACGGGATGCGCAAGCCATGGATCGATAAGGTGGTAGGTGGGTTTAGGC
196 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* *
15900492 ACATCTTCATATTTCTTCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
261 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
*
15900557 AAGCCTTCACGTGAAGTTCCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
326 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * * *
15900622 TTTACAGTTCAGGATTTTTTAAAATTTTTT-TAGAAGGA-TATTTGGCTCCAAACTTGGTAGACG
391 TTTACGGTTCGGGATTTTTTAAAATTTTTTCGA-AAGGAGT-TTTGGCCCCAAACTTGGTAGACG
* * * *
15900685 TGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAATTCAAAGTGTACAAGATA
454 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* *
15900750 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTAT
519 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
** **
15900815 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATGAGGGATAGGGATCCAAT
584 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * **
15900880 ATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGTGCACACCCCCCGGCCCCGTCGATCGC
649 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
* ** *
15900945 CAGAACCCCAATGCCGTTGGTCAGGTTCTCCGGTGATGTTCCGGCGATGGTGCCCCGACGAAGAA
714 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAA
* * **
15901010 AAATGCGGCACCAGCACATGTCCGAGCCTAGCATGTGCTGTTGCAACCCTCGGTCC-G---G---
779 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC
15901068 -T---C------TG-A-T-C--A----TAGACTGGGAATGAACTCCGTATGCCTA
844 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * * * *
15901104 AGTCAACCAACAAAACGAGCGTGCGGGTGCTTAGTCGGCCA-AAGGGCTGGGATGTGCAAGCCGA
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC-GGGATGCGCAAGCCGG
* * * * *
15901168 GGATCGACCAGGTCCCCTTCTGCATGCTGCCGATCCTGCTGCCGTAACCCTCGGTCCGGTCCGAT
65 GGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGAT
* *
15901233 CTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGG
130 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG-CGGGCGGGCGGG
* * **
15901298 CACTACGCCGGCTAGAGAGCCGGGATTTGCAAAGCCGTGGATTCGATAGGGTGGTAGGTGGGGTT
194 CACTACGCCGGCCAGAGAGACGGGATGCGC-AAGCCGTGGA-TCGATAGGGTGGTAGGT-GGGTT
*
15901363 TAGGGCACAATCTTCATATTTCTGCAAGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
256 TA-GGCAC-ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
15901428 GTCCCTTAGGTCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTT
319 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
** ** *
15901492 GATAACATTCTTTGTGGTTCGGGATTTTTTAAAA-TTTTTCGGAGGGGAGTTTTGGCCCTAAACT
384 GA-AAC-TT-TTTACGGTTCGGGATTTTTTAAAATTTTTTC-GAAAGGAGTTTTGGCCCCAAACT
** * *
15901556 TGGTAGACGTGCCCTCTTGTATTTTTCCTTGGGATGCACCAAAAAAATTCAGCTAAAAACTCGAA
445 TGGTAGACGTGATC-CTTGTATTTTT-GTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAA
*
15901621 GTGTATCAAGCATTTTTGTGACCAAGCGCTTGAAAAAAGTGT-CCCATTTCAGACACTTTAATGG
507 GTGTA-CAAG-A-TTTTGTGACC-A---TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * *
15901685 CTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTAATGAGTTCTCAACGTTTG
565 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT-GTGAGTTCTCGAGGTTTG
** * * *
15901750 ATGAGGGATAGGGGAG-CAATATAAGGGCCAAGTATGAGCACCCTTTGCACATCATGGGCGCACA
629 ATGAGGGATAGGGG-GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
** * * **
15901814 CCCCCC-GTTCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACGATGCTCCGG
693 CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGG
* * * *
15901878 CGATGGTACACCGATGAAGAAAAATGCGGCACCAGCACATGCCC-AGCCCAGCATGTGCTGCCAC
758 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * *
15901942 AACCCTCGGCCCGATCCGATCTTAGACTTGGAATGAACTCCGTATGCTTAAACTGGGAATGAACT
823 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
15902007 CCGTATGCCTA
888 CCGTATGCCTA
* * ** *
15902018 AGTCAACCCATGAAACGAGCGTACGGGCGCTCAGTGGGCCAGAGGGGCAGGATGCGCAAGCCGGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
** ** * *
15902083 GATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTAGTTTGATG
66 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * * * *
15902148 TTAGACTGGGATTGAATTTCGTATGCCTAAGCCAACTGACGAAGCTAGCAGGCGGGCGGGCGGGC
131 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-A---A--A--CGAGC-GGCGGGC
* * * *
15902213 GGGCGGGCTGGCACTAGGCCGGCCAGAGAGGCGGGATTCGCAAGCCGTGGATCGTTAGGGTGGTA
187 GGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * *
15902278 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGTCGATGCCATTTTTGTGGCTTGTAAATTCAT
248 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * * *
15902343 ACAATGGTCCCTTAATCCTTCACGCGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTTACG
313 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * * *
15902408 ATTTTTGAAACTTTTTACGGTTCGGGATTTTCTAAAATTTTTTCGGAAGGAATTTTGGCCCTAAA
378 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAA
* * *
15902473 CTTTGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
443 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* * * * *
15902538 CGTACAAGATTTTGTGACCATTCGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTATTGGT
508 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
*
15902603 AGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
573 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * *
15902668 AGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCGCACAACATGTGCGCACACCCCCCTGTC
638 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGC
* * * **
15902733 CCCCCTGATCACCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCAATGCTCCGGCGATGGTGC
702 CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGC
** * * * * * *
15902798 CCCGGTGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAACATGTGCCGTCACAACCCTCGG
767 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * *
15902863 TCTC-GTCCAATCATAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGC
832 TC-CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
15902927 CTA
896 CTA
* * * * *
15902930 AGTCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGTGAGATGCGTAAGCCGGG
1 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * ** *
15902995 GATCGGCCGGGT--CCC-C--C-T-CT----A-CGTGCTGCCGCAACCCTCAGTTTGGTCGGATC
66 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* *
15903048 GTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGGAACGAGCGGGCGGGCGGGCGGGC
131 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGGCGGGC
* ** *
15903113 ACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATAAATAGGGTGGTAGGTGGGTTTTGG
195 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
*
15903178 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAATACAATGGTCCCT
260 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
**
15903243 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACT
325 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
* * **
15903308 TTTTACGGTTCGGGATTTTTTAAAATTTTTTTGAAATGAGTTTTGGCCCCAAACTTCTTAGACGT
390 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* * * *
15903373 GATCCTTGTATTTTTTTTTCGCATGCACAAAAAAATTCAGCTAAAAACCCGAAGTATACAAGATT
455 GATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* *
15903438 TTCTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTAT
519 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15903503 AAAATATCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAAT
584 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * *
15903567 ATAAGGGCCAAGTACCATCACCCATCGCACATCATGTGCACACACCCCCCCGGTCCCCCCGATCA
649 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCG
* * *
15903632 CCGGAACCCCAATGCTGCCCGTCAAGTTCTCC---GA--------CGATGGTGCCCCGACGAAGA
713 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGA
* * *
15903686 AAAATGAGGCACTACCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
778 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
15903751 CTTAGACTGGGAATGAACTCCGTATGC
843 CTTAGACTGGGAATGAACTCCGTATGC
15903778 GTAAGCCAAC
Statistics
Matches: 7744, Mismatches: 909, Indels: 434
0.85 0.10 0.05
Matches are distributed among these distances:
849 4 0.00
850 171 0.02
851 4 0.00
852 1 0.00
853 1 0.00
854 2 0.00
857 2 0.00
858 115 0.01
859 1 0.00
860 1 0.00
861 1 0.00
862 1 0.00
863 1 0.00
864 6 0.00
866 3 0.00
867 13 0.00
868 53 0.01
869 110 0.01
870 3 0.00
871 129 0.02
872 35 0.00
873 297 0.04
874 12 0.00
875 64 0.01
876 153 0.02
877 584 0.08
878 149 0.02
879 32 0.00
880 492 0.06
881 18 0.00
882 27 0.00
883 59 0.01
884 177 0.02
885 7 0.00
886 9 0.00
887 273 0.04
888 439 0.06
889 413 0.05
890 89 0.01
892 60 0.01
893 551 0.07
894 2 0.00
895 1 0.00
896 121 0.02
897 916 0.12
898 28 0.00
899 4 0.00
900 404 0.05
901 641 0.08
902 165 0.02
903 4 0.00
905 4 0.00
906 2 0.00
907 2 0.00
908 1 0.00
909 89 0.01
910 68 0.01
911 87 0.01
912 151 0.02
913 11 0.00
914 165 0.02
915 10 0.00
916 30 0.00
917 9 0.00
918 12 0.00
919 50 0.01
920 9 0.00
921 108 0.01
922 24 0.00
923 9 0.00
924 17 0.00
925 10 0.00
926 28 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCA
CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
TTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCG
GAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAA
ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTT
AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
Found at i:15896677 original size:26 final size:26
Alignment explanation
Indices: 15896648--15896700 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15896638 CCGGTACGAT
*
15896648 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
15896674 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
15896700 C
1 C
15896701 CTAAGTCAAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:15898422 original size:26 final size:26
Alignment explanation
Indices: 15898382--15898434 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15898372 CCAGTCTGAT
*
15898382 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15898408 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15898434 C
1 C
15898435 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15899327 original size:25 final size:26
Alignment explanation
Indices: 15899284--15899335 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
15899274 CTGGTCCAAT
15899284 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15899310 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15899335 C
1 C
15899336 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 17 0.68
26 8 0.32
ACGTcount: A:0.29, C:0.21, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15901991 original size:26 final size:26
Alignment explanation
Indices: 15901962--15902014 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15901952 CCGATCCGAT
* *
15901962 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
15901988 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
15902014 C
1 C
15902015 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:15902912 original size:26 final size:26
Alignment explanation
Indices: 15902876--15902926 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15902866 CGTCCAATCA
15902876 TAGACTAGGAATGAACTCCGTATGCT
1 TAGACTAGGAATGAACTCCGTATGCT
* *
15902902 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTAGGAATGAACTCCGTATGC
15902927 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCGTATGCT
Found at i:15904509 original size:26 final size:26
Alignment explanation
Indices: 15904458--15904510 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15904448 CTGGTTTGAT
*
15904458 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15904484 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
15904510 C
1 C
15904511 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15905398 original size:26 final size:26
Alignment explanation
Indices: 15905359--15905412 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
15905349 TCTGGTCTGA
*
15905359 GCTTAGACTGGGAATGAACTCCATAT
1 GCTTAGACTAGGAATGAACTCCATAT
*
15905385 GCTTAGACTAGGAATGAACTCCGTAT
1 GCTTAGACTAGGAATGAACTCCATAT
15905411 GC
1 GC
15905413 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.20, G:0.24, T:0.26
Consensus pattern (26 bp):
GCTTAGACTAGGAATGAACTCCATAT
Found at i:15905919 original size:898 final size:896
Alignment explanation
Indices: 15903722--15914443 Score: 10411
Period size: 900 Copynumber: 11.9 Consensus size: 896
15903712 GCCCAGCATG
*
15903722 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCGTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * ** * * *
15903787 CCGATGAAATGA---G-CGGGCGGTCGGGAACTGTGTCGGCCAGAGAGACGGGATACACAAGCCG
66 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
15903848 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCTATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
15903913 TATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAGGACGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* ** * * * *
15903978 CATTTTCTATTTTTCAAAATTTTTGAAACTTTTTGCGGTTCGGGA-TTTTTAAAATTTTTTTGAA
261 CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAA-TTTTTTGGA
* *
15904042 AGGAGTTTTGGCACCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAAT
325 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
15904107 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAGAC
390 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
15904172 ACTTTAATGGCCACTGGCAGCAAACCTGTAAAATGTCAAATGCTCTTTAAGGGTGTGTGAGTTCT
455 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
15904237 CGAGGTTTGATGAGGGATAGGGGGCCAATGTAAGGGCCAAGTACCAGCTCCCATCGCACATCATG
520 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
15904302 TGCGCACACCCCCCGACCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAACGAT
585 TGCGCACACCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGAT
* * * *
15904367 GCT-CGGCTATGGTTCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCAAGCATGTG
649 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
15904431 CTGCCGCAACCATCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
714 CTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
** * * * * * * * *
15904496 ATGAACTCTATATGCCTAAGTTAACCTAGGAAATGAGAGTACGGGCGCTCAGTCGACCAGAGTGG
779 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGG
* * * * * * **
15904561 CGGGATGCGTAAGTCGGGGATCGGTCGGGTCCACCTCTGCATGCTATCGATCC
844 CGGGATGCGCAAGCCGGGGATAGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * * * ** * *
15904614 TGCTACTGTAACCCTCGGTCTGATTGGATCTTAGATTGGGAATAAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
15904679 CCAACGAAACGAGTGAACGGGCGGGCTGGCGTGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
66 CCGACGAAACGAGCGGACGGGCGGGC--G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
15904744 GCCGTGGATCGATATGGTGGTAGGTGGGTTTCGGCACATCTTCATATTTCTACGTGCCAATGCCA
127 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
15904809 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
192 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * ** * *
15904874 GGCTCATTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATATTTT
257 GACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAAT-TTTT
* * ** *
15904939 CGGAAGTAGTTTTGGCTGCAAACTTGGTAGACGTGATGCTTGTATTTTTGTTGGCATGCACAAAA
321 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
15905004 AAATTCAGCTTAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAACGTGTCCCCATTTC
386 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * * *
15905069 AAACTCTTTGATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGATCTTTAAGGGGGTGTGAG
451 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15905134 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACAT
516 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
15905199 CATGTGCGCACACCCCCCGGCCCCCCGATCACCGGAACCCCAATGTCGCCGATCAGGTTCTCCAG
581 CATGTGCGCACACCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-G
* * * * * *
15905264 TGATGCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGACACCAACACATGCCCAAGCCCAGCA
645 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
** * * *
15905329 TGTGCTACCGTAACCCTCGGTCTGGTCTGAGCTTAGACTGGGAATGAACTCCATATGCTTAGACT
710 TGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * *
15905394 AGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGTGCTCAGCCGACCAGA
775 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
** * * * *
15905459 GGGGTAGGATGCGTAAGCCGAGGATAGGTCGGGTCCCCCTCTACGTACTGCCAATCC
840 GGGGCGGGATGCGCAAGCCGGGGATAGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* *
15905516 TGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
15905581 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCATAGAGACGGAATGCGCAAGCCG
66 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
15905646 TGGATCGGTAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * *
15905711 TATGGATTGTAAATTCATACAACGGTCCCTTAAGCCTTCACTTGAAGTTTCATGGCAAGACGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
15905776 CGTTTTCCACTTTTCATGATTTTCAAAACTTTTTACGGTTCAGGATTTTTTAAAATATTTTTGGA
261 CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAAT-TTTTTGGA
* *
15905841 AGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTATTGGCATGCACAAAAAAAT
325 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* **
15905906 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCTGTTTCAGAC
390 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
15905971 ACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGAT-TGAGTTC
455 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG-GGGTGTGAGTTC
* *
15906035 TCGAGGTTTGATGAGGCAGAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
519 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
** * * *
15906100 GTGCGCACACCCCCCCCGGCCCCCCGATCGGCGGAACCCCAATGCCGTCGGTCAAGTTCTCTAGC
584 GTGCGCACA--CCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTC-CGC
* * *
15906165 GATGCT-CGGCTATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCAAGCAT
646 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
** * *
15906229 GTGCTACCGCAACCATCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCAGTATGCTTAGACTG
711 GTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * *
15906294 AGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCAACCAGAG
776 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAG
* * * * * *
15906359 TGGTGGGAGGCGCAAGCCGGGGATCA-GTCGGGTCCCCCTCTGCATGCTGTCGATCC
841 GGGCGGGATGCGCAAGCCGGGGAT-AGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * * * ** *
15906415 TGCTACCGTAACCCTTGGTCTGATTGGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * **
15906480 CCGATGAAACGAGCGAGCATGCGGGCCGGCGTAG-TGTACGCCGGCCAGAGAGACGGGATGCGCA
66 CCGACGAAACGAGCG-G-A--CGGGCGGGCG-GGCACTACGCCGGCCAGAGAGACGGGATGCGCA
*
15906544 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTAG-GTGCCAATGC
126 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCGTGCCAATGC
15906608 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
190 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
** * ** *
15906673 ACGACTCGTTTTCTATTTTTTGTGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTT
255 ACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTT
* * * * *
15906738 TTAGGAAGGAGTTTTGGCCCCAAACTTGGTGGCCGTGATCATTTTATTTTTTTTGGCATGCACAA
320 TT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
15906803 AAAATTTCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATT
384 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * * *
15906868 TCAGACACTTTAATGGCTACTGGCAGCAAACCCGTAATATCTCAAATGCTCTTTAACGAGGTGAG
449 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * **
15906933 AGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTGCCAGCTTCCATCGCAC
514 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
15906998 ATCATGTGCGCATACCCCCCTCCCGCCCCCCGAT-AGCCGGAACCCCAATGTCGCCGGTCAGGTT
579 ATCATGTGCGC--ACACCCC-CCGGCCCCCCGATCA-CCGGAACCCCAATGCCGCCGGTCAGGTT
* **
15907062 CTCCGATGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
640 CTCCG-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
*
15907127 CCAGCATGTGCTGTCACAA-CC-C--TC--G---G----T---CT--G---G---TCCG-AT-CT
704 CCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* * *
15907166 TAGACTGGGAATTAACTCCGTATGCCTTAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCG
769 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * ** * * * * *
15907231 ACAAGAGTGGCGGGATTTGCAAGCAGGGGATCAGCT-GGGTCCCCCTCTGCGTGCTACCGATGC
834 ACCAGAGGGGCGGGATGCGCAAGCCGGGGAT-AGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * * **
15907294 TGCTGCCGCAACCCTCGATCCGATCCGATCTTAGATTGGGAATAAACTTTGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * * * *
15907359 CTAACGAAACGAGC-GA---GCGAGCGGGCATTGCACCGGCCAGAGAGACGGGATACGCAAGCCA
66 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
15907420 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTTTTGCGTGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
15907485 TATGGCTTGTACATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
*
15907550 CGTTTTCTATTTTTCATGATTTTTTAAAA--GTTT----TTC--G--------AAA-------G-
261 CGTTTTCTATTTTTCATGA-TTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTGGA
* *
15907591 A--TGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGAATTTTTGTTGGCATGCACAAAAAAAT
325 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* ** *
15907654 TCAGCTACAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCATCCCCATTTTAGAC
390 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
15907719 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
455 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
15907784 TGAGGTTAGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAACTCACATCATG
520 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
15907849 TGCGCACACCCCCCTTGGCCCCCCTGACCACAGGAACCCCAATGCCACCGGTTAGGTTCTCCGGA
585 TGCGCACACCCCCC--GGCCCCCC-GATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GC
* * * *
15907914 GATTCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGACACCAGCACATGCCCTAGCCCAGCAT
646 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * *
15907979 GTGCTGCCGCAACCCTCGGTCTAGTTTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTG
711 GTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * * *
15908044 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGAGGGCACTAAGTCGGCCAGAG
776 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAG
* * * * * * *
15908109 GGGCGAGATGCGTAAGCCGGAGATCGGTTGGGTCCCCCTCTACGAGCTGTCGATCC
841 GGGCGGGATGCGCAAGCCGGGGATAGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* ** ** * * * *
15908165 TGTTATCGTGACCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGGCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
15908230 CCGATGAAAC--G-GG-CGGGCGGGTGGGCACTACGCCGGCCTGAGAGATGGGATGCGTAAGCCG
66 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* ** * *
15908291 TGGATCGATAGGGTGGTAGGTGGGCTTAGGCATGTCTTCATATTTCTGCGTACCAAAGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
15908356 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACAACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
15908421 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-TGAGATTTTTTAAAATTTTTTTGG
261 CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAA-TTTTTTGG
* * **
15908485 AAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACCCAAAAA
324 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
15908550 TCCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
389 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
15908615 CACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
454 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
15908680 TTGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAAATCAT
519 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
15908745 GTGTACACACCCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCTCCGATCAGGTTCTCCGA
584 GTG--CGCACACCCCCCGG-CCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-
** ** *
15908810 CGATGCTCCGGTGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCAAATGCCCGAGCCCAGCA
645 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* ** * *
15908875 TGTGCT-ACGCAACCCTCATTCTAGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACT
710 TGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * * * * *
15908939 AGGAATGAACTCCATATGGCTAAGTCAACCCACGAAACGAGCGTACGGGTGCTCAACCGGCCAAA
775 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
* * * ** * * * * *
15909004 GGGGTGGGATGCGCAAGCCGAGGATCGACCAGGTCCTCCTCTATGAGCTGTCGATCC
840 GGGGCGGGATGCGCAAGCCGGGGATAGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * *
15909061 TACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
15909126 ACGACG-AA--A-C-GA-----------G-----CG--GG-C-G-GAGACGGGATGCGCAAGCCG
66 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* **
15909165 TGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
15909230 TATGG-TGTGTAAATTCATACAATGGTCCCATAAGCCTTCACGTGAAGTTTCATGGCAAGGCGAC
196 TATGGCT-TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
15909294 TCGTTTTCTACTTTTCACGA-TTTTAGAAACCTTTTGCGGTTC-GAGATTTTTTAAAATTTTTTC
260 TCGTTTTCTATTTTTCATGATTTTTA-AAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTT-
* * * * *
15909357 AGAAGAAGTTTTGGCCCCAAACTTGGTATACATAATCCTTGTATTTTTGTTGGCATGCACAAAAA
322 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
15909422 ATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGGAAAAAGTGT-CCCATTTCA
387 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
15909486 AACACTTTAATGGCTACTGGCAGCAATCCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGT
452 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
15909551 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCAACGCACATC
517 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *** *
15909616 ATGTGCGCACACCCCCTCGGCCCCCTGATTGTCGGAACCCCAATGCCGCTGGTCAGG-T-T---C
582 ATGTGCGCACACCCCC-CGGCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGC
* * * *
15909676 --T-CT-AG-CGATGGTGCCCCGACGAAAAAAAATACGGCACCAGCACATGCCCGAGCTCAGCAT
646 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
*
15909736 GTGCTGTCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
711 GTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * * * *
15909801 GGAGTGGACTCCTTATG-CTAAAGTCAACCCATGAAATGAGCGTGCGGGCACTCAGCCGGCCAGA
776 GGAATGAACTCCGTATGCCT-AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
* * * ** ** * * *
15909865 AGGGTGGGATGCGCAAGCTGATGATCA-ACCGGGTCCCCCTCTGCATGCTGCCGATCT
840 GGGGCGGGATGCGCAAGCCGGGGAT-AGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * ** * **
15909922 TGCTACCGCAACCCTCAGCCCACTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAAACAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
15909987 CCGATGAAACGAGCGGACGGGCGGGCGGACGGGCACTACGTCGGCTAGAGAGACGGGATGCGCAA
66 CCGACGAAACGAGCGGACGGGC--G-GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * ***
15910052 GCCGTGTATCGATAGGGTGGTTGGTGGGTTTA-GCACATCTTCATATTTCTGCATATGAATGCCA
127 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
*
15910116 TTTTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
192 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
15910181 CACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTT
257 GACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAA-TTTTT
** *
15910246 TGGAACAATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
321 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
15910311 AAATTCAGTTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
386 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
15910376 AGACACTTTAATGGCTACTGGTAGCAAACCTGTAACATCTCAAATGCTTTTTAAGGGCGTGTGAG
451 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15910441 TTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGT--C-G----CA---CAC--
516 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * * * * *
15910494 CATGTGCGCACACCCCCCCGACCACCCCGATCGTCGGAACCCCAATGTCTCTGGT--GATGCTCC
581 CATGTGCGCACA-CCCCCCGGCC-CCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* *** * * ** * ** * *** *
15910557 GGCGATGGTCC--C--TTAAGCCTTC-ACG-TG-AAGTTTCATGGCAAGACGACTCATTTTCTAT
644 -GCGATGCTCCGACGATGGTGCC-CCGACGAAGAAAAATGC--GGCACCA-G-CACATGCCCGA-
*** ** ** * * * * * *
15910615 TTTTCA-CGAT-T--T-TCAAAACTTTTTACGGTTTGAGAT-T--TTTTAAAATTTTTTTGGAAG
702 -GCCCAGC-ATGTGCTGTCGCAAC--CCT-CGGTCTG-G-TCTGATCTT-AGA----CTGGGAAT
* * ** * * ** ** * **
15910672 GAGTTTTGGCCCCAAAATTG-TTAGAC-GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAC-A
755 GA------ACTCC-GTA-TGCTTAGACTGGGA---ATG-AACTCCG-T---ATGC-CTAAGTCAA
** * * **** *** * ** * * * *** **
15910734 TTCAGCTAAAAACTCGAAGTGTAAAAGATTTTATGACC-ATTTAAAAAGTGTCCCTAT-TTC-AG
803 CCCA-C--GAAA--CG-AGCGTGCGGGCGCTCA-G-CCGA---CCAGAGGGGCGGGATGCGCAAG
**** ** * ** **
15910796 ACACTTTAAT-GGCTACTGGCAG-CAAACCTATAAAATG-T--C-A-AA
857 -C-CGGGGATAGG-T-C-GG--GTC-CCCCTCT-ACGTGCTGCCGATCC
* *** *** ** ** * * ** *
15910838 AGCT-CTTTAA--GAGGGTGTGAGTTCTCGAGGTTTGA-TGAGGGAT-AAGGGGCCAATATAAGG
1 TGCTGCCGCAACCCTCGGTCCG-G-TC-CGATCTTAGACTG-GGAATGAA--CTCC-GTAT----
* * * * ** *** *** * * *
15910898 GCC-AAGTACCAGCACCCATCCCACATC-ATG-TG-CGCTCACCCCCCCGAC-CCCCCGGATCAT
55 GCCTAAG--CCA--ACCGA--CGA-AACGA-GCGGACGGGCGGGCGGGC-ACTACGCCGG-CCA-
* *** * ** * * *
15910958 CGA-AAACCCCAATGC-C--GCCGGTCAGGTTCTCTGGCGATGCTCCGGTGATGGTGCCCCGATG
109 -GAGAGA-CGGGATGCGCAAGCC-GT--GGATCGATAG-G--G-T--GGT-A-GGTG----GGTT
* ** * ** * *** * * * * ***
15911019 AAGAAAAATGCGGCACCAGCACATGCCTAAGCCTA-G-CATGTTCTGTCGATCGCTCCAGTCCTC
157 TAGGCACAT-CTTCA-TATTTC-TGCGT--GCCAATGCCAT-TT-T-T--ATGGCT--TGT-AAA
* * ** * * * ** *
15911082 TCTGCGTGCTGTCGATCCTGCTGCCATAACCCTCGGTC-CGATCCGATCG-TAGACTGGGAATGA
209 T-T-CATACAAT-GGTCC--CT----TAAGCCT---TCACG-T--GA-AGTTTCA-TGGCAA-GA
** ** * ***** ****** * * ***** ****
15911145 --ACTCCGTATGCCTA---AGCA-AACCGACAAAACAAACGGGCGG-GCGGGCGGGCATTACGCC
256 CGACT-CGT-TTTCTATTTTTCATGATTTTTAAAAC-TTTTTACGGTTCAGG-ATTTTTTAAAAT
***** * * **** * * *
15911203 GGCCAGAGAGATGGGATTTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCGCAAACTTGGTAGACG
317 TTTTTG-GA-A--GGAGTTTTG------G--CCCCAA--A--CTT-G--GTAGAC---GT-----
* *
15911268 CGATCCTTTTATTTTTGTTGGCATGCAC--AAAAAGTCAGCTAAAAACTCG-AGTGTACAAGATT
355 -GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
15911330 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
419 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15911395 AAAATCTCAAATGCTCCTCAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
484 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* *
15911460 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCCTCGATCG
549 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCC-CGATCA
* * ** *
15911525 TCGGAACCCCAATGCCGTCAATCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAAGA
612 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * * * *
15911590 AAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGATCCGAT
676 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGAT
* *
15911655 CTTAGACTGGGAATGAACTCCGTTTGCTTAGACTGGGAATGAACTCCGTTTGCGTATCCCTAAGT
741 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT-C-----CGTATGCCTAAGT
* * * * * * *
15911720 CAACCCACAAAAGGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGACGGGATGTGCAAGTCGGGGAT
800 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * *
15911785 CGGCCGAGTCCCCCTCTGCGTGCTACCGATCC
865 AGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * * * * *
15911817 TACTGTCGCAACCCTCGGTCTGGTCTGATCTTAGA-TGGGGAATGAACTCTGTATGCCAAAGCCC
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCA
** **
15911881 ACCGATAAAACGAGCGGACGGGTAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
65 ACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
15911946 GTGGGTCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCATGCCAATGCCATTT
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
15912011 TTATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
195 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
15912076 TCGTTTTCTATTTTTTATGATTTTTGAAACTTTTTACGGTTAAGGATTTTTTAAAATTTTTTCGG
260 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTT-GG
* * *
15912141 AAGGAGTTTAGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTACAAAAAAT
324 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
15912206 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGA
389 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
15912271 CACTTTAATGGTTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
454 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
15912336 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-CCCTATCGCAAATCA
519 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC-ATCGCACATCA
* *
15912400 TGTGCGCACACCCCCCGGCCCCCCGATCACCGGAACCCCAACGCCGCCAGTCAGG-T-T---C--
583 TGTGCGCACACCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGA
* * * * * *
15912458 T--T-CGACGATGGTGCCCTGACGAAGAAAAATGTGGCCCCAGCACTTGCCCGAGCCTAGAATGT
648 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
*
15912520 GCTGCCGCAACCGTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
713 GCTGTCGCAACC--C--TC--G---G----T---CT-GG--T---CT--G-AT-CTTAGACTGGG
*
15912585 AATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
752 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * **
15912650 TTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATAG-GCAAGCCGGGGA-ACGGTCGGGTCCCATT
817 GTGCGGGCGCTCAGCCGACCAGAGGGGCGGGAT-GCGCAAGCCGGGGATA-GGTCGGGTCCCCCT
* *
15912713 CTACGTGCTGCCAATGC
880 CTACGTGCTGCCGATCC
* * *** * * *
15912730 TGCTGCTGTAACCCTTAATCCGGTCCAATTTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** ** **
15912795 CCGACGAAACGA---G-CGGGCGGGCCAGCACTACATCAACCAGAGAGACGGGATGCGCAAGCCG
66 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
15912856 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
15912921 TATGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTGATGGCAAGACGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
*
15912986 CGTTTTTTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTT-AAATTTTTTCGGA
261 CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTT-GGA
* * *
15913050 AGGATTTTTGGCCGCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
325 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
15913115 CCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAATAGTGTCCCCATTTCAGAC
390 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * * *
15913180 ATTTTAATGGCTACTGGCAGCAAACCTATAGAATCTCAAATGCTTTTTAAGGTGGTGTGAGTTCT
455 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
15913245 CGAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
520 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * ** * * * *
15913310 TGCG--CACCCCCTGGCCCCTCTGATCGTCGGAACCCCAATGCTGCCGGTTAGGTTCTTCGGTGA
585 TGCGCACACCCCCCGGCCCC-CCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTC-TCCGCGA
* * * *
15913373 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGACACCAACAAATGCCCGAGCCCAGCATGT
648 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * * *
15913438 GATGTCGTAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGGTTAGACTGGG
713 GCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * * *
15913503 AATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGAGTGTTCAGTCGACCAGAGGG
778 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGG
* * * * * *
15913568 GCGGGATGTGCAAGCTGGGGATCGGTCGGGTCCCCCTCTACGTGCTACTGATTC
843 GCGGGATGCGCAAGCCGGGGATAGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * * * * * * * * *
15913622 TGCTACTGTAACCCTCAGTTCGCTTCGATCTTACACTGGGAATGAACTTCGTATGCCTAACCCAG
1 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
15913687 CCGATGAAACGAGCGAACGGACGGGCGGGCGGGCACTATGCCAGCCAGAGAGACAGGATGCGCAA
66 CCGACGAAACGA--G--CGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * *
15913752 GCCGTGGATCAATAGGGTGGTAGGTGGATTTCA--CACATCTTCATATTTTTGCATTCCAATGCC
127 GCCGTGGATCGATAGGGTGGTAGGTGGGTTT-AGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
15913815 ATTTTTATGGCTTGTAAATTCATAGAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
191 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
15913880 CGACTCGTTTTCTATTTTTCATGGTTTTCAAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTT
256 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTT
* * *
15913944 TTCGGAAGGATTTTTGGCCACAAACTTGGTAGACGTTATCCTTGTATTTTTGTTGGCATGCACAA
320 TT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* ** *
15914009 AAAAACTCAATTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATT
384 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
15914074 TCAGACACTTTAATGGTTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
449 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
15914139 AGTTCTTGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCAC
514 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * * *
15914204 ATCATGTGCGTACACCCCCTGGCCCCCCCGATCTCCGGAACCCCAATCCCGTCGATCAGGGTCTC
579 ATCATGTGCGCACACCCCCCGG-CCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * *
15914269 CGACGATGCTCCGACGATGATGCCCCGACGAAGAAAAATACGGCACCAACAGATGCTCGAGCCCA
643 CG-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * ** *
15914334 GCATGTGCTGTCGTAACCCTCGGTCTGGCCTGATCTTAGACTATGAATGAACTTCGTATGCTTAG
707 GCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * *
15914399 ATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
772 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
15914444 AAGTGGGCAG
Statistics
Matches: 8085, Mismatches: 1286, Indels: 908
0.79 0.13 0.09
Matches are distributed among these distances:
842 2 0.00
843 6 0.00
844 7 0.00
845 334 0.04
846 4 0.00
847 2 0.00
848 1 0.00
849 2 0.00
851 1 0.00
854 1 0.00
856 3 0.00
858 1 0.00
860 55 0.01
861 209 0.03
862 4 0.00
863 2 0.00
864 2 0.00
865 2 0.00
866 6 0.00
869 6 0.00
870 18 0.00
871 549 0.07
872 14 0.00
873 147 0.02
874 287 0.04
875 1 0.00
876 4 0.00
877 3 0.00
878 2 0.00
879 195 0.02
880 36 0.00
881 7 0.00
883 4 0.00
884 5 0.00
885 17 0.00
886 9 0.00
887 13 0.00
888 12 0.00
889 10 0.00
890 246 0.03
891 168 0.02
892 270 0.03
893 63 0.01
894 4 0.00
895 4 0.00
896 225 0.03
897 341 0.04
898 469 0.06
899 450 0.06
900 575 0.07
901 328 0.04
902 485 0.06
903 488 0.06
904 75 0.01
905 101 0.01
906 198 0.02
907 29 0.00
908 257 0.03
909 222 0.03
910 3 0.00
911 1 0.00
912 12 0.00
913 151 0.02
914 9 0.00
915 15 0.00
916 23 0.00
917 6 0.00
918 68 0.01
919 46 0.01
920 6 0.00
921 5 0.00
922 12 0.00
923 7 0.00
924 3 0.00
925 16 0.00
926 4 0.00
927 16 0.00
928 13 0.00
929 9 0.00
930 9 0.00
931 14 0.00
932 2 0.00
933 4 0.00
934 6 0.00
937 3 0.00
938 5 0.00
939 3 0.00
940 6 0.00
941 10 0.00
942 4 0.00
943 3 0.00
944 3 0.00
946 10 0.00
948 3 0.00
949 6 0.00
950 4 0.00
951 11 0.00
952 6 0.00
953 3 0.00
954 9 0.00
958 10 0.00
959 1 0.00
960 5 0.00
961 11 0.00
962 12 0.00
963 9 0.00
964 9 0.00
965 14 0.00
966 13 0.00
967 6 0.00
968 9 0.00
969 13 0.00
970 4 0.00
972 2 0.00
973 5 0.00
974 5 0.00
975 7 0.00
976 1 0.00
977 7 0.00
978 4 0.00
979 23 0.00
980 15 0.00
981 4 0.00
982 6 0.00
983 9 0.00
984 1 0.00
986 152 0.02
987 20 0.00
988 8 0.00
989 35 0.00
990 6 0.00
991 6 0.00
992 1 0.00
993 3 0.00
996 3 0.00
997 10 0.00
998 43 0.01
999 2 0.00
1000 18 0.00
1001 9 0.00
1002 10 0.00
1003 2 0.00
1004 17 0.00
1005 1 0.00
1006 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTGGAA
GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGC
TCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
GTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCG
GGATGCGCAAGCCGGGGATAGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
Found at i:15906298 original size:26 final size:26
Alignment explanation
Indices: 15906259--15906311 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15906249 CTGGTCTGAT
*
15906259 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACTGAGAATGAACTCAGTATG
*
15906285 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCAGTATG
15906311 C
1 C
15906312 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCAGTATG
Found at i:15908045 original size:26 final size:26
Alignment explanation
Indices: 15908009--15908061 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15907999 CTAGTTTGAT
*
15908009 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15908035 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15908061 C
1 C
15908062 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15908956 original size:26 final size:26
Alignment explanation
Indices: 15908905--15908956 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
15908895 CTAGTCTGAT
* * *
15908905 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
15908931 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
15908957 GCTAAGTCAA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.17, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:15909802 original size:26 final size:26
Alignment explanation
Indices: 15909766--15909819 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
15909756 CTGGTCTGAT
15909766 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* * *
15909792 CTTAGACTGGGAGTGGACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15909818 CT
1 CT
15909820 AAAGTCAACC
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.22, C:0.20, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15911684 original size:26 final size:26
Alignment explanation
Indices: 15911655--15911707 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15911645 CCGATCCGAT
15911655 CTTAGACTGGGAATGAACTCCGTTTG
1 CTTAGACTGGGAATGAACTCCGTTTG
15911681 CTTAGACTGGGAATGAACTCCGTTTG
1 CTTAGACTGGGAATGAACTCCGTTTG
15911707 C
1 C
15911708 GTATCCCTAA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.23, C:0.21, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTTTG
Found at i:15912584 original size:26 final size:26
Alignment explanation
Indices: 15912548--15912626 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
15912538 CTGGTTTGAT
15912548 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15912574 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15912600 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15912626 C
1 C
15912627 CTAAGTCAAC
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.28, C:0.20, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15913496 original size:26 final size:26
Alignment explanation
Indices: 15913467--15913517 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15913457 CGGTCCGATC
15913467 TTAGACTGGGAATGAACTCCGTATGG
1 TTAGACTGGGAATGAACTCCGTATGG
*
15913493 TTAGACTGGGAATGAACTCTGTATG
1 TTAGACTGGGAATGAACTCCGTATG
15913518 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.14, G:0.29, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGG
Found at i:15916749 original size:881 final size:877
Alignment explanation
Indices: 15914394--15918472 Score: 4959
Period size: 868 Copynumber: 4.6 Consensus size: 877
15914384 ACTTCGTATG
* *
15914394 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA-AGTGGGC-A----
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGCGGGGGCGACGGG
* *
15914453 --GGCACTACACCCGGACAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGG
66 CGGGCACTAC-GCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGG
*
15914516 TTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
** *
15914581 GTCCCCAAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* *
15914646 GAAACTTTTTACGGTTCGA-ATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGT
260 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACTTGGT
* *
15914710 AAACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCGAAGTGTACA
324 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * * * *
15914775 ACATTTTGTTATCTTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAGA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
15914840 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGG
* * * *
15914905 CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCTTGTGCGCACACCCCCCGGCCCCCCCG
519 CCAATATAAGGGCCAAATACCAGCACCCATCGCACATCATGTGCACACACCCCCCGG-CCCCCCG
* * * * * *
15914970 ATCGCTAGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGCTTCGGCGATGGTGCCCCGACA
583 ATCGCCAGAACCCCAATGCCACCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACG
*
15915035 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTT-GG-TCCGG
648 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTCGGATCTGG
* * ** * *
15915098 TCCGATCTTTGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGT-GGGCGGGC
713 TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGACTCGTACAGGT
* * * * * * * * **
15915162 ACTCAGCCGGCCTGAGGGATGGGAAGCGCAAGCCGGGGATCGGCCGGGTCCCTCTTTGTGTGCTG
778 GCTCAGCCGGCCAGAGGGGTGGGATGAGCAAGCC-GGGATCGGTCGGGTCCCCCTCTACGTGCTG
* * *
15915227 CCGATCATGCTGCCGTAACCCTC-GATCTGGTCTAAT
842 CCGATCCTGCTGCCGCAACCCTCAG-TCTGGTCTGAT
* * *
15915263 CTTAGATCGGGATTGAACTCCATATGCCTAAGCCAACCGACGAAAC--G-AGC---GG-G-CGGG
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGCGGGGGCGACGGG
* *
15915320 CGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGT
* * * * *
15915385 TTAGTCACATCTTCATATTTCTACGGGCCAATGCCATTTTTATGACTTGGAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * **
15915450 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTTGTTTTCTATTTTTCACGATTTTCA
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * * * *
15915515 AAACTTTTTGCGGATCAAAATTTTTTAAAATTTTTGCGAAAGGATTTTTGGCCCCCAAACTTGGT
261 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG--CCCAAACTTGGT
* * *
15915580 AGACGTGATCCTTGTATTTTTGTTGGAATGCA-TAAAAAATTCAGCTAAAAACTCGAAGGGTACA
324 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
15915644 AGATTTTGTTATCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
15915709 CCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGC
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGG
* **
15915774 CCAATATAAGGGCCAAGA-ACCAGCACCCATCGCACATCTTGTGTGCACACCCCCCGGCCCCCCG
519 CCAATATAAGGGCCAA-ATACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCCCG
* * ** ** ** * * * **
15915838 ATCGTCGGAACCGTAATGCTGCTAGTCAGGTTCTCCGGTGATGCTTCGACGATGGTGCCCTGGTG
583 ATCGCCAGAACCCCAATGCCACCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACG
*
15915903 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CCTTC-GATCTGG
648 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTCGGATCTGG
* *
15915966 TCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGA-TCGTACAGGT
713 TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGACTCGTACAGGT
* * *
15916030 GCTCAGCCGGACAGAGGGGTGGGATGAGCAAGCTAGGGATCGGTCGGGTCCCCCTCTACGTGCCG
778 GCTCAGCCGGCCAGAGGGGTGGGATGAGCAAGC-CGGGATCGGTCGGGTCCCCCTCTACGTGCTG
* **
15916095 CTGATCCTGCTGTTGCAACCCTCAGTCTGGTCTGAT
842 CCGATCCTGCTGCCGCAACCCTCAGTCTGGTCTGAT
*
15916131 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCAGACGGGAAGGCCGA
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAG-CGGG--GG-CGA
* * *
15916196 CGGGCGGGCACTTCGCAGGCCAGAGAGACGGGATGCACAAGTCGTGGATCGATAGGGTGGTAGGT
62 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGT
*
15916261 GGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
127 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
15916326 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCATGATT
192 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * *
15916391 TTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCGGAAGGCGTTTTGGACCCAAGCT
257 TTTGAAACTTTTTACGGTTCGAGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACT
* *
15916456 TGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTG
320 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
* *
15916521 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTCATGGCTACTGGCAG
385 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
** * *
15916586 CAAACCTGTAAAATCTCAAATGCTCTTTAACAGGGTGTGAGTTCTCAAGGTTTGATGATGGATAA
450 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAA
* *
15916651 GGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCATATCATGTGCACACACCCCCTGGCCCC
515 GGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCC
* * *
15916716 CCGATCGCCAGAACCCTAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCG
580 CCGATCGCCAGAACCCCAATGCCACCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCG
** *
15916781 GTGAAGAAAAATGGGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCC-CAACCCTTGGTCC
645 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CCGCAACCC----T--
* *
15916845 GGTCCGGTCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAA
703 --T-CGG----A-TCT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * * *
15916910 GTCAACCCATAAAACGA-GCGTGCGGGAGCTCAACCGGCCAGAGGGGCGGAATGCA-CAAGCCGA
750 GTCAACCCACAAAACGACTCGTACAGGTGCTCAGCCGGCCAGAGGGGTGGGATG-AGCAAGCCG-
* * * * * * *
15916973 GGATCAGTCGGGTCCCCCTTTGCATGCTGCGGATCCTGCTGCCACAACCCTCAGGTC-GGTCCGA
813 GGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCA-GTCTGGTCTGA
15917037 T
877 T
* * *
15917038 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAGTAACGAGC-G-GGCGGGCGA---
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGCGG-GGGCGACGG
** * * * * *
15917098 GCGGGCACTATACTGACCAGAGAGATGGGATGCGCAAGTCGTGGATCGATAGGGTGGTTGGTGAG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGG
* *
15917163 TTTAGGCACATCTTCATATTTCTGCATGCCAGTGCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
15917228 GTCCCTTAAGCCTTAACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * *
15917293 GAAACTTTTTGCGATTCGAGATTTTTTAAAATTTTTTCGGAAGGTGTTTTTGCCGCAAACTTGGT
260 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC-CAAACTTGGT
*
15917358 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
324 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
15917423 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACCTTTAATGGCTACTTAGCAGCA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA-CTTTAATGGCTAC-TGGCAGCA
*
15917488 AACCTGTTAAAATCTCAAATGCTCTTTTAAGGGGGTGTGAGGTTCTTGAGGTTTTGATGAGGGAT
452 AACCTG-TAAAATCTCAAATGCTC-TTTAAGGGGGTGTGA-GTTCTCGAGG-TTTGATGAGGGAT
* * *
15917553 AGTGGGGCCATATATGAAGGGGCCAAGTACCAGCAACCCATCGCACATGATGTGCACACACCCCC
513 A-AGGGGCCA-ATAT-AA-GGGCCAAATACCAGC-ACCCATCGCACATCATGTGCACACACCCCC
* * *
15917618 CGGCCCCCCGATTGCC-GGACCCCAATTGCCATCGGTCAGGTTCTCCGATGATGCTCCGACGATG
573 CGGCCCCCCGATCGCCAGAACCCCAA-TGCCACCGGTCAGGTTCTCCGATGATGCTCCGACGATG
* * * * * *
15917682 GTGCCCCAACGAAGAACAATGTGGCACCAGCAACTATGCTCGAGCCTAGGCATGTGCCTGTCGCA
637 GTGCCCCGACGAAGAAAAATGCGGCACCAGC-AC-ATGCCCGAGCCCA-GCATGTG-CTGCCGCA
* * * * *
15917747 ACCC-TCTG-TCTGGTTCGATCTTAGACCAGGGAATGAACTCCGTATGCTTCGACTAGTAAAGAA
698 ACCCTTCGGATCTGGTCCGATCTTAGA-CTGGGAATGAACTCCGTATGC--CTA--AGT---CAA
* * * * * *
15917810 CCTTCGTATGCCAAAGTCAACCCATGAAACAAGTGTGCGGGCACTCAGCCGGCTAGAAGGGTGGG
755 CC--C--A---CAAA-ACGACTC--G-TAC-AG-GT----G--CTCAGCCGGCCAGAGGGGTGGG
* * *
15917875 ATGCGCAAGGCCGAGATCGGTAGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTC
801 ATGAGCAA-GCCGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTC
* *
15917940 AATCCGGT-TCGAT
865 AGTCTGGTCT-GAT
* * * * *
15917953 CTTAGACTGGGAATGAACTCCGTATGCCCAAGCCAATCGACGAAACGAGCAGGCAGGCAGGCAAG
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA-GC-GG-GGGCGA-
* * * * * **
15918018 CGGGCGGGCACTACGCTGGCTAGAGAGACGGGATGCGAAAGCCATGGATCTTTAGGGTGGTAGGT
62 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGT
* * **
15918083 GGGTTTTGGCACATCTTCATATTTCTACGTGCCAATGTTATTTTTATGGCTTGTAAATTCATACA
127 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * * *
15918148 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTAGTTTTTTATTTTTCATGATT
192 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * *
15918213 TTTGAAACCATTTT-CGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCACCAAACT
257 TTTGAAA-CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC-CCAAACT
* * * *
15918277 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATACAGCCACAAACTCGAAGTG
320 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
*
15918342 TACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGCAG
385 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
15918407 CAAACCTGTAAAAT-T-AAATGCTCCTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGAT-A
450 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAA
15918469 GGGG
515 GGGG
15918473 NNNNNNNNNN
Statistics
Matches: 2776, Mismatches: 312, Indels: 200
0.84 0.09 0.06
Matches are distributed among these distances:
864 2 0.00
866 1 0.00
867 7 0.00
868 468 0.17
869 286 0.10
870 44 0.02
871 2 0.00
872 1 0.00
877 2 0.00
879 1 0.00
880 238 0.09
881 335 0.12
882 4 0.00
886 1 0.00
887 6 0.00
888 21 0.01
889 3 0.00
890 3 0.00
891 1 0.00
892 5 0.00
895 5 0.00
896 1 0.00
897 7 0.00
898 140 0.05
899 210 0.08
900 13 0.00
901 17 0.01
902 20 0.01
903 14 0.01
904 17 0.01
905 12 0.00
906 9 0.00
907 177 0.06
908 26 0.01
909 104 0.04
910 2 0.00
911 11 0.00
912 8 0.00
913 14 0.01
914 2 0.00
915 133 0.05
916 12 0.00
917 15 0.01
918 8 0.00
919 8 0.00
920 6 0.00
921 13 0.00
922 13 0.00
923 322 0.12
924 6 0.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (877 bp):
CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGCGGGGGCGACGGG
CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAACTTGGTAG
ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCC
AATATAAGGGCCAAATACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCCCGATC
GCCAGAACCCCAATGCCACCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAG
AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTCGGATCTGGTCC
GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGACTCGTACAGGTGCT
CAGCCGGCCAGAGGGGTGGGATGAGCAAGCCGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGA
TCCTGCTGCCGCAACCCTCAGTCTGGTCTGAT
Found at i:15916882 original size:26 final size:26
Alignment explanation
Indices: 15916853--15916905 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15916843 CCGGTCCGGT
15916853 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15916879 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15916905 C
1 C
15916906 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15920779 original size:26 final size:26
Alignment explanation
Indices: 15920750--15920802 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15920740 GTAGACTTAG
*
15920750 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15920776 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15920802 G
1 G
15920803 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15921664 original size:26 final size:26
Alignment explanation
Indices: 15921634--15921686 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15921624 GTTGACTTAG
15921634 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15921660 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15921686 G
1 G
15921687 ATCGGACCAA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15922513 original size:898 final size:897
Alignment explanation
Indices: 15919887--15923872 Score: 5522
Period size: 898 Copynumber: 4.5 Consensus size: 897
15919877 GTTGACTTAG
* ** * * * *
15919887 GCATACGGAGTTCATTCCCAGTCTAAGATTGGA-TTGTACTGAGGGTTACAGCAGCACATGCCGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGAAC-AAGGGTTGCAGCAGCACATGCTGG
* * * * * **
15919951 GCTCGGGCATATGCTGGTGCCGTATTTTTCTTCGTCGAGGCGCCATCACCGAAGCATCAACGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAG
* * *
15920016 AACTTGACC-GACAGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCACACATGATGTG
130 AACTTGACCGGA-GGCATTGGGGTTCCGACGATCGGGGGGCTGGGGGGTGTGCGCACATGATGTG
* ** * ***** *
15920080 CGATGGGTGCTGGTTGTTGGCCCTTATATTTTTTGCCTATCCCTCTTCAAACCTCGAGAACTCAC
194 CGATGGGTGCAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
15920145 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTTCTACCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
15920210 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTATACTTCGAGTTTTTCGCTGAATTTTTTTT
324 GGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTA
* * **
15920275 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAACTTCGGGGCCAAAACTCCTTCCAAAAAA
*
15920340 ATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATGGTGAAAAATAGAAACGAGTCGTCTTG
454 ATTTTAAAAAATCCCAAACCGCAAAAA-TTTCAAAAATCGTGAAAAATAGAAACGAGTCGTCTTG
15920405 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
** *
15920470 TGGCATGCAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGC
583 TGGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
*
15920535 TTCCCGTCTCTCTGGCCAGCGTAGTGCCCG-CT-------CG-TTCGTTTCGTCGGTTGGCTTAG
648 ATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCTGCCCGCCCGCTT-GTTTCGTCGGTTGGCTTAG
* * * ** ** *
15920591 GCATACGGAGTTCATTCCCAGTCTAAGATCAAACCA-AACTGAGGGTTAAGACAGCAGGATCGAC
712 GCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGATCTGAGGGTTGTGGTAGCAGGATCGGC
* *** ** * * *
15920655 AGCAGGCAGAGGGGGACCCGGTTGATCCCTAGCTTGCGCATCCCGCCCTTCTGGCTGACTGAGCA
777 AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTGACTGAGCG
* * * *
15920720 CCAGCACGCTCGTTTCATGGGTAGACTTAGGCATACGGAGTTTATTCCCAGTCTAA
842 CCCGCACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15920776 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCA-GACCAAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGA-CAGGAACAAGGGTTGCAGCAGCACATGCTGG
* * * *
15920840 GCTCGGGCATTTGTTGGTGTCGCATTTTTC-T--TC---G-----T---CGGAGCATC-CTCGAA
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGC-CGGA
* * * *
15920890 GAACCTGACCGGAGGCATTGGGGTTCCAACAATCGGGGGGCCGGGGGGTGTGCGCACATGATGTG
129 GAACTTGACCGGAGGCATTGGGGTTCCGACGATCGGGGGGCTGGGGGGTGTGCGCACATGATGTG
* * * * * *
15920955 TGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACATCGAGAACTCAC
194 CGATGGGTGCAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
15921020 ACCCCCTTAAAGAGCATTTGAGAGTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGCCTGAAAT
259 ACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
15921085 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAG-TTTTAGCTGAATTTTTTT-
324 GGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTA
* * * * * **
15921148 TGCATGCCAAAAAAAATACAAGGATCACGTTTACTAAGTTTGATGCCAAAACTCCTTCCGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAACTTCGGGGCCAAAACTCCTTCC-AAAAA
* * *
15921213 AA-TTTAAAAAATCCCGAACCGTAAAGAGTTTCAAAAATCGTGAAAAATAGAAACGAGTCGTCTT
453 AATTTTAAAAAATCCCAAACCGCAAA-AATTTCAAAAATCGTGAAAAATAGAAACGAGTCGTCTT
* ** *
15921277 GCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGAAATCAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*** * * * *
15921342 TTGGCACATAGAAATATGAAGA-AGTACCTAAACCCACCTACCACCCTATCGATCCCCGACTTCC
582 TTGGCATGCAGAAATATGAAGATA-TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * * *
15921406 GCATCCCATCTCTC-GGGCAACGTAGTGCCTGCCTGCCTACCCGTCCGCTCGTTTCGTCAGTTGG
646 GCATCCCGTCTCTCTGGCCAGCGTAGTG-C--CC-GCCTGCCCGCCCGCTTGTTTCGTCGGTTGG
* * * *
15921470 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGA-CTGAGTGTTCTAGTAGCAGGA
707 CTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGATCTGAGGGTTGTGGTAGCAGGA
* * * * * * *
15921534 TCGGCAGTACGCAGCGGGGGACCCGACCGATCCCCGACTTGTGCATCCCGCTCCTCTGG-TCGGC
772 TCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCT-GAC
*
15921598 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 TGAGCGCCCGCACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15921660 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCA-AAACAAGGGTTG-TGAAAGCACATGCTG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGA-CAGGAACAAGGGTTGCAG-CAGCACATGCTG
* * * * *
15921723 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTTGGGGCACCATCGCCGGAGCATCGTCGGA
64 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGA
* * * * *
15921788 GAACCTGACCGGTGACATTTGAGGTTCCGACGATCAGGGGGGCTGGGGGGTGTGCACACATGATG
129 GAACTTGACCGGAGGCA-TTGGGGTTCCGACGATC-GGGGGGCTGGGGGGTGTGCGCACATGATG
*
15921853 TGTGATGGGTGCAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
192 TGCGATGGGTGCAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
15921918 ACACCCCCATAAAGAGCATTTGAGATTTTACAAG-TTGCTGCCAGTAGCCATTAAAGTGTCTAAA
257 ACACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
15921982 ATGGGGACACTTTTTTCAAATGGTTACAAAACCTTGTACACTTCGATTTTTTTGCTGAATTTTTT
322 ATGGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
*
15922047 TATGCATGCCAACAAAAATACAAGGATCACGTCTACCAACTTCGGGGCTAAAAACTCCTTCCAAA
387 TATGCATGCCAACAAAAATACAAGGATCACGTCTACCAACTTCGGGGC-CAAAACTCCTTCCAAA
** *
15922112 AAAATTTTAAAAAATCCCAAACCGCAAAAATTTTGAAAATCGTGAAAAATAGAAAACGAGTCTTC
451 AAAATTTTAAAAAATCCCAAACCGCAAAAATTTCAAAAATCGTGAAAAATAG-AAACGAGTCGTC
* * *
15922177 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAATCCAT-AAAGTGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
15922241 CATTGGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
580 CATTGGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
15922306 TGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCCCGCTTGTTTCTTCGGTTGGCTT
645 CGCATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCTGCCCGCCCGCTTGTTTCGTCGGTTGGCTT
* **
15922371 AGGCATATGGAGTTCATTCCCAATCTAAGATTGGACCAGATC-GAGGGTTGTGGTAGCAGGATCG
710 AGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGATCTGAGGGTTGTGGTAGCAGGATCG
*
15922435 GCAGCACGCAGAGGGGGACCTGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTGACTGAG
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTGACTGAG
* * *
15922500 CGCCCGTACGCTCGTTTCGTCGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAA
840 CGCCCGCACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * *
15922558 GCATGTGGAGTTCATTCCCAGTCTGAGATCGGACAGGAACTAGGGTTACAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGAACAAGGGTTGCAGCAGCACATGCTGGG
* *
15922623 CTCGGACATGTGCTGGTGCTGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGA
* *
15922688 ACTTGACC-GACGGCATTGGGGTTTCGACGATCGGGGGGCCTGGGGGGGTGTGCGCCCATGATGT
131 ACTTGACCGGA-GGCATTGGGGTTCCGACGATCGGGGGG-CT-GGGGGGTGTGCGCACATGATGT
*
15922752 GCGATGGGTGTAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
193 GCGATGGGTGCAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
15922817 CACCCCCATAAAGAGCATTTGAGATTTTACAAG-TTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
258 CACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
15922881 TGGGGACACTTTTTTCAAATGGTTACAAAACCTTGTACACTTCGATTTTTTTGCTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* *
15922946 ATGCATGCCAACAAAAATACAAGGATCACGTCTACCAACTTCGGGGCTAAAACTCTTTCCAAAAA
388 ATGCATGCCAACAAAAATACAAGGATCACGTCTACCAACTTCGGGGCCAAAACTCCTTCCAAAAA
* ** *
15923011 AATTTTAAAAAATCCCAAACCGTAAAAATTTTGAAAATCGTGAAAAATAGAAAACGAGTCTTCTT
453 AATTTTAAAAAATCCCAAACCGCAAAAATTTCAAAAATCGTGAAAAATAG-AAACGAGTCGTCTT
* * * * *
15923076 GCCACGAAACTTCACGTGAACGCTTAAGGGACCATTGTTTGAATTTACAATCCATAAAAGTGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
15923141 TTGGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTG
582 TTGGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* *
15923206 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCCCGCTTGTTTCTTCGGTTGGCTTAG
647 CATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCTGCCCGCCCGCTTGTTTCGTCGGTTGGCTTAG
* ** *
15923271 GCATATGGAGTTCATTCCCAATCTAAGATTGGACCAGATC-GAGGGTTGTGGTAGCAAGATCGGC
712 GCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGATCTGAGGGTTGTGGTAGCAGGATCGGC
*
15923335 AGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTGACTGAGCG
777 AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTGACTGAGCG
* * * *
15923400 CCCGTACGCTCGTTTCGTCGGTTGACTTAGGCATATGGAGTTCATTCCCGGTCTAA
842 CCCGCACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * *
15923456 GCATGTGGAGTTCATTCCCAGTCTAAGATCGGACAGGAACTAGGATTGCAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGAACAAGGGTTGCAGCAGCACATGCTGGG
*
15923521 CTCGGGCATGTGCTGGTGCTGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGA
* *
15923586 ACTTGACC-GACGGCATTGGGGTTTCGACGATCGGGGGGCCTGGGGGGGTGTGCGCCCATGATGT
131 ACTTGACCGGA-GGCATTGGGGTTCCGACGATCGGGGGG-CT-GGGGGGTGTGCGCACATGATGT
*
15923650 GCGATGGGTGTAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
193 GCGATGGGTGCAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
15923715 CACCCCCATAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAA
258 CACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
15923780 TGGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
*
15923845 GTGCATGCCAACAAAAATACAAGGATCA
388 ATGCATGCCAACAAAAATACAAGGATCA
15923873 TGTGCTAGTG
Statistics
Matches: 2813, Mismatches: 228, Indels: 102
0.90 0.07 0.03
Matches are distributed among these distances:
872 11 0.00
873 237 0.08
874 24 0.01
875 227 0.08
876 3 0.00
877 2 0.00
878 1 0.00
883 3 0.00
884 261 0.09
885 3 0.00
886 2 0.00
887 1 0.00
888 1 0.00
889 78 0.03
890 3 0.00
895 1 0.00
896 6 0.00
897 153 0.05
898 1204 0.43
899 207 0.07
900 135 0.05
901 143 0.05
902 107 0.04
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (897 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGAACAAGGGTTGCAGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGA
ACTTGACCGGAGGCATTGGGGTTCCGACGATCGGGGGGCTGGGGGGTGTGCGCACATGATGTGCG
ATGGGTGCAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
GGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATG
CATGCCAACAAAAATACAAGGATCACGTCTACCAACTTCGGGGCCAAAACTCCTTCCAAAAAAAT
TTTAAAAAATCCCAAACCGCAAAAATTTCAAAAATCGTGAAAAATAGAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
CCGTCTCTCTGGCCAGCGTAGTGCCCGCCTGCCCGCCCGCTTGTTTCGTCGGTTGGCTTAGGCAT
ACGGAGTTCATTCCCAATCTAAGATCAGACCAGATCTGAGGGTTGTGGTAGCAGGATCGGCAGCA
CGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTGACTGAGCGCCCG
CACGCTCGTTTCATCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:15922568 original size:26 final size:26
Alignment explanation
Indices: 15922532--15922581 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15922522 GTTGACTTAG
15922532 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
*
15922558 GCATGTGGAGTTCATTCCCAGTCT
1 GCATATGGAGTTCATTCCCAGTCT
15922582 GAGATCGGAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.22, C:0.24, G:0.22, T:0.32
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGTCTAA
Found at i:15923466 original size:26 final size:26
Alignment explanation
Indices: 15923430--15923482 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15923420 GTTGACTTAG
*
15923430 GCATATGGAGTTCATTCCCGGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
*
15923456 GCATGTGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
15923482 G
1 G
15923483 ATCGGACAGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.23, C:0.23, G:0.25, T:0.30
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGTCTAA
Found at i:15924153 original size:341 final size:341
Alignment explanation
Indices: 15923527--15924212 Score: 1031
Period size: 341 Copynumber: 2.0 Consensus size: 341
15923517 TGGGCTCGGG
* * *
15923527 CATGTGCTGGTGCTGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGAACTTGA
1 CATGTGCTAGTGCTGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGAACCTAA
* * * * *
15923592 CCGACGGCATTGGGGTTTCGACGATCGGGGGGCCTGGGGGGGTGTGCGCCCATGATGTGCGATGG
66 CCGACGGCATTGGGATTCCAACGATCGGGGGGCC--GGGGGGTGTGCGCACATGATCTGCGATGG
* *
15923657 GTGTAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
129 GTGTAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCAAAAACTCACACCCCC
* *
15923722 ATAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAATGGGGAC
194 ATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAATGGGAAC
*
15923787 ACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCAAGTTTTTA-GCTGAATTTTTTTGTGCAT
259 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAG-TTTTAGGCTGAATTTTTTT-TGCAT
15923851 GCCAACAAAAATACAAGGAT
322 GCCAACAAAAATACAAGGAT
* * ** *
15923871 CATGTGCTAGTG-TCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTGGAGAACCTA
1 CATGTGCTAGTGCT-GCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGAACCTA
*
15923935 ACCGGCGGCATTGGGATTCCAACGATCGGGAGGGCC-GGGGG-GTGCGCACATGATCTGCGATGG
65 ACCGACGGCATTGGGATTCCAACGATCGGG-GGGCCGGGGGGTGTGCGCACATGATCTGCGATGG
* *
15923998 GTGCT-GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAAAACTCACTCCCC
129 GTG-TAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCAAAAACTCACACCCC
* * *
15924062 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATGGGAA
193 CATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAATGGGAA
* **
15924127 CACTTTTTTCAAATGGTCAGAAAATCTTGTACACTTTGAGTTTTAGGCTGAATTTTTTTTGCATG
258 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTAGGCTGAATTTTTTTTGCATG
15924192 CCAACAAAAATACAAGGAT
323 CCAACAAAAATACAAGGAT
15924211 CA
1 CA
15924213 CGTCTACCAA
Statistics
Matches: 311, Mismatches: 27, Indels: 12
0.89 0.08 0.03
Matches are distributed among these distances:
340 32 0.10
341 187 0.60
342 6 0.02
343 1 0.00
344 80 0.26
345 5 0.02
ACGTcount: A:0.24, C:0.23, G:0.24, T:0.28
Consensus pattern (341 bp):
CATGTGCTAGTGCTGCATTTTTCTTCATCGAGGCACCATCACCGGAGCATCGCCGGAGAACCTAA
CCGACGGCATTGGGATTCCAACGATCGGGGGGCCGGGGGGTGTGCGCACATGATCTGCGATGGGT
GTAGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCAAAAACTCACACCCCCAT
AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAATGGGAACAC
TTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTAGGCTGAATTTTTTTTGCATGCCA
ACAAAAATACAAGGAT
Found at i:15925584 original size:26 final size:26
Alignment explanation
Indices: 15925554--15925606 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15925544 GTTGACTGAG
15925554 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15925580 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15925606 G
1 G
15925607 ATCGGACTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15927392 original size:26 final size:26
Alignment explanation
Indices: 15927363--15927415 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15927353 GTTGACTTAG
* *
15927363 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTACATTCCCAGTCTAA
*
15927389 GCATATGAAGTACATTCCCAGTCTAA
1 GCATACGAAGTACATTCCCAGTCTAA
15927415 G
1 G
15927416 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTACATTCCCAGTCTAA
Found at i:15928305 original size:26 final size:26
Alignment explanation
Indices: 15928269--15928321 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15928259 GTTGACTTAG
*
15928269 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
*
15928295 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
15928321 G
1 G
15928322 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:15928485 original size:904 final size:903
Alignment explanation
Indices: 15924673--15928812 Score: 5729
Period size: 904 Copynumber: 4.6 Consensus size: 903
15924663 GTTGACTTAG
* * * *
15924673 GCATACGGAGTTCATTACCAATCTAAAATCGAACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
15924738 CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTTGGGGCACCATCGTCGGAGAATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * *
15924803 ACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGAGGGTGTGCGCGCATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGG-GGGTGTGCACACATGATGTG
* *
15924868 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCAAGAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
15924933 ACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGCAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
15924998 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * **
15925063 TGCATGCCAACGAAAATACAAGGATCATGTCTACTAGGTTTGGGGCCAAAACTCCTTCCAAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
** * * *
15925128 ATTTTAAAAAATCTTGAACCGTAAAAAGTTTTGAAAATCGTGAGAAATTGAAAATGAGTCGTCTT
455 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
15925193 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCA
520 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
15925258 TTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTTCCACCCTATCGATCCACGGCTTGCG
585 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * *
15925323 CATCCCGTCTCTC-GGCCGACGTAGTGCCCGCCCGCCCGCCCACCCGCCCACTCTTTTCCTCGGT
650 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG----CCCGCCCGCTCGTTTCGTCGGT
* * * * * **
15925387 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCTCGAACTGAACTGAAGGTTACGGTAGCAG
711 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAG
** ** * * * *
15925452 GATTGGTAGCACATAGAAGGGGACCCGATCAATCCCCGGCCTACACATCCCGCCCCTCTGGACGA
776 GATCAGTAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTACACATCCCGCCCCTCTGGCCGA
* * *
15925517 CAGAGCGCCCGCACGCTCGTTTCATGGGTTGACTGAGGCATACGGAGTTCATTCCCAGTCTAA
841 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15925580 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCAAGGGTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * *
15925645 CTCGGGTATGTGCCCGTGCCGTATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* *
15925710 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGAGCCGAAGGGGGGTGTG-AGCACATGATG
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCG--GGGGGGTGTGCA-CACATGATG
* * *
15925774 TGCGATGGGTGTTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTTGAGAACTC
193 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* ** *
15925839 GCACTTCCTTAAAGAGCATTTGTGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
15925904 ATGGGGACACTTTTTTCGAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTT
323 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * * *
15925969 TGCGCAGGCCAACAAAAATACAAGGATCACGTCTACTAGGTTAGGGGCCAAAACTACTTCTGAAA
388 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * *
15926034 AAATTATAAAAAATCCCGAACCATAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCATC
453 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTC
* *
15926099 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTGCAGGCCATAAAAATGG
518 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*
15926164 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCACGGCTTG
583 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
15926229 CGCATCCCATCTCTCTGGCCGGCGTAATGCCCGCCCGCCCGCCCGCCCGTTCTCTAGTTTCGTCA
648 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCG--CTC--GTTTCGTCG
* ** * *
15926294 GTTGGCTTAGGCATACGGAGTTCACTCCCAGTCTAAGATTAGATCGGA-TCGAGGGTTAC-AGTA
709 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACT-GAGGGTTACGA-CA
* * * * * * ** *
15926357 GCAAGATTAGCAGCATGCAGAGGGGGACCTGGTCGATCCTTGGCTTACGCATCCCGCCCCTCTGG
772 GCAGGATCAGTAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTACACATCCCGCCCCTCTGG
* * * * * *
15926422 CCGATTGAGCGCCCACATGCTCGTTTTGTGGGTTGACTTAGGCATACAGAGTTCATTCCTAGTCT
837 CCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
15926487 AA
902 AA
* ** ** *
15926489 GCATATGGAGTTCATTCCCAGTCTAAGATCAAACCGGACCGAGATTTGCGGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
15926554 CTTGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
15926619 ACCTGACCGACGGCATTGGGGTTCTGGCGATCGAGGGAGCCGGGGGGTGTGTG--CACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGGCCGGGGGG-GTGTGCACACATGATGT
*
15926682 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTAGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
15926747 CACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
15926812 TGGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTCCGAGTTTTTAGCTGAATGTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
15926877 GTGCATGCCAACAAAAATAGAAGGATCACATCTACCAAGTTTTGGGCCAAAACTCC--CTAAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
* *
15926940 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCATCT
454 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
15927005 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
** * * * *
15927070 ATTGGCATGTGGAAATATGAACACGTGCCTAAACCCACCTACCACCTTATCGATCCATGGCTTGC
584 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
15927135 GCATCCCGTCAT-TCTGGCCAGCGTAGTGCTCGCCCGCCCGTCCGCCCGCTCGTTTCATCGATTG
649 GCATCCCGTC-TCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTG
* * * * * * * *
15927199 GCTTAAG-ATACGGAGTTTATTCCTAGTCAAAGATCGGACCAGAC-CATGGGTTGCGGCAGCAGG
713 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGA-GGGTTACGACAGCAGG
* * * * * * *
15927262 ATCGGTAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCTGTC
777 ATCAGTAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTACACATCCCGCCCCTCTGGCCGAC
*
15927327 TGAGCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
842 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ***
15927389 GCATATGAAGTACATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGCAGCACATGCTAAC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * * ** * *
15927454 CTCGGGCATGTGTTGGTGTCACATTTTTCTTCGTTGGGGCACCATTG-CTGAAGCACCATCGAAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTC-GGAGCATCGCCGGAG
* * * * * * * *
15927518 AACCTAACCGACGGCATTAGGGTTCCAGCAATCGGGGGGGTCAGGGGGGTTGTGCGCACATGATG
130 AACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGG-CCGGGGGGGTGTGCACACATGATG
* * * * *
15927583 TGTGATGGATGCTGGTACTTGGCCCTTATATTGGCCTCCAATCCTTCATCAAACCTCGAGAACTC
193 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
15927648 ACACCCCCTTAAAGAGCATTTGACATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAA
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
15927713 AT-GGGACACCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
323 ATGGGGACA-CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
15927777 TTTTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACACCTTCTGAA
387 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAA
* * * * * *
15927842 AAAATTTGAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACAAGTTGT
452 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
15927907 CTTGCCATCAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTATAAGCCATAAAAATG
517 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
*
15927972 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCACGGCTT
582 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * *
15928037 GTGCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGTCCGTCCGCCCGCCTGTTCGTTTCGTCGGTT
647 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTT
* * * * *
15928102 GGCTTAGGCTTATGGAGTTCATTCCCAGCCTTAGATCGGACCGGACTGAGGGTTGCGACAGCAGG
712 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGG
* * *
15928167 ATCAGTAGCACGCAGAGAGAGGG--CCTAGTCGATCCCCAGCTTGCACATCCCGCCCCTCTGGCC
777 ATCAGTAGCACGCAGAG-G-GGGACCCGA-TCGATCCCCGGCTTACACATCCCGCCCCTCTGGCC
* * * *
15928230 GGCTGAGCGCCCGCACGTTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
839 GACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
15928295 GCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
15928360 CTCGAGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCTGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
15928425 ACCTAACCGGCGGCATTGAGGTTCCGGTGATCGGGGGGCCGGGGGGGTGTGCACACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGTGTGCACACATGATGTGC
*
15928490 GATGGGTGCTGGTACTTGGTCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
15928555 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
15928620 GGGAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCTGAATTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
15928685 ACATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCGTTC-GAAAAA
391 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC-TTCTGAAAAA
* * * ** * *
15928749 ATTTTAAAAAATCCCAAATCGTAAAAAGTTTTAAAAATTATGAAAAATAGAAAACAAGTTGTCT
455 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCT
15928813 GGCCGACGTA
Statistics
Matches: 2850, Mismatches: 350, Indels: 69
0.87 0.11 0.02
Matches are distributed among these distances:
899 2 0.00
900 288 0.10
901 30 0.01
902 234 0.08
903 4 0.00
904 555 0.19
905 312 0.11
906 227 0.08
907 398 0.14
908 455 0.16
909 337 0.12
910 8 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (903 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGTGTGCACACATGATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
TTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGACAGCAGGATCA
GTAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTACACATCCCGCCCCTCTGGCCGACTGAG
CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:15929993 original size:197 final size:197
Alignment explanation
Indices: 15929600--15930001 Score: 493
Period size: 200 Copynumber: 2.0 Consensus size: 197
15929590 AGGCTTAAGG
* * *
15929600 GACCATTGTATGAATTTACAAGCAATAAAAATGGTATTGGAACGTAGAAATATGAAGATGTGCCT
1 GACCACTGTATGAATTTACAAGCAATAAAAATGGTATTGGAACGCAGAAATATGAAGATGTGACT
** ** *
15929665 AAACCCACTACCACCCTATCGATCCACAGCTTGTGCATCCCGTCTCCCTGGCCGGCGTAATGCCC
66 AAACCCACTACCACCCTATCGATCCACAGCTTGCACATCCCACCTCCCTGGCCGACGTAATGCCC
* ** * *
15929730 GCCCACCTGCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
131 G--C-CCTGCCCACCCGCTCGTTTAATCAGTTGGCTTAGGCATACGAAGTTCATTCCCAATCTAA
*
15929795 GATCT
193 GATCA
* * * *
15929800 GACCACTGTATGAATTTACAAGCCATAAAACTGGCT-TTGGCATGCAGAAATATGAAGATGTGAC
1 GACCACTGTATGAATTTACAAGCAATAAAAATGG-TATTGGAACGCAGAAATATGAAGATGTGAC
* * * * *
15929864 TAATCCCACCTACCACCCTATCGATCCACGGCTTGCATATCCCACCTCTCTGGCCGACGTAGTGC
65 TAAACCCA-CTACCACCCTATCGATCCACAGCTTGCACATCCCACCTCCCTGGCCGACGTAATGC
* * * **
15929929 CTG-TCTGCCCACCCGCTTGTTTAATTGGTTGGCTTAGGCATACGAAGTTCATTCCCAATCTAAG
129 CCGCCCTGCCCACCCGCTCGTTTAATCAGTTGGCTTAGGCATACGAAGTTCATTCCCAATCTAAG
15929993 ATCA
194 ATCA
15929997 GACCA
1 GACCA
15930002 GACTGAGGGT
Statistics
Matches: 172, Mismatches: 28, Indels: 7
0.83 0.14 0.03
Matches are distributed among these distances:
197 60 0.35
200 62 0.36
201 50 0.29
ACGTcount: A:0.26, C:0.29, G:0.20, T:0.26
Consensus pattern (197 bp):
GACCACTGTATGAATTTACAAGCAATAAAAATGGTATTGGAACGCAGAAATATGAAGATGTGACT
AAACCCACTACCACCCTATCGATCCACAGCTTGCACATCCCACCTCCCTGGCCGACGTAATGCCC
GCCCTGCCCACCCGCTCGTTTAATCAGTTGGCTTAGGCATACGAAGTTCATTCCCAATCTAAGAT
CA
Found at i:15932869 original size:26 final size:26
Alignment explanation
Indices: 15932840--15932892 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15932830 GTTAACTTAG
*
15932840 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15932866 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15932892 G
1 G
15932893 ATTGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:15934322 original size:903 final size:900
Alignment explanation
Indices: 15931957--15934538 Score: 3675
Period size: 903 Copynumber: 2.9 Consensus size: 900
15931947 TTGACTTAGT
* * * * **
15931957 CATACGGAGTTCATTCCCAGTCTAAGTTTGGATTGAACCGAGGGTTGCAGCAGCACATGCTGGGC
1 CATACGGAGTTCATTCCCAATCTAAGATTGGA-TGGATCGAGGGTTGTGGCAGCACATGCTGGGC
* *
15932022 TCGGGCTTGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCTTCAGAGCATCGTCGGAGAA
65 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGTCGGAGAA
* * * * *
15932087 CCTTGGCAGACGGCATTGAGGTTTTGACGATCGGGGGGCCGAGGGGGGTGTGCGGACATGATGTG
130 CC-TGACCGACGGCATTGGGGTTTCGACGATCGGGGGGCCG-GGGGGGTGTGCGCACATGATGTG
* * *
15932152 CGACGGGTACAGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC-CTATCCCTCATCAAACCTCGAGAACTCAC
* *
15932217 ACCCCCTTAAAGAGCATTTGAGATTGTACAGGTTTGCAGCCAGTAGCCATTAAAGTGTCTGAAAT
257 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
15932282 GTGGACACTTTTTTCAAATGGTCAAAAAATCTTGTA-AGCTTCGAGTTTTTAGCTGAATTTTTTT
322 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA-CTTCGAGTTTTTAGCTGAATTTTTTT
* * *
15932346 GTGCATGCCAACAAAAACACAAGGATCACGTCTACCAAGTTTGGGGCCAGAACTCCTTCCAAAAA
386 GTGCTTGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAGAAATCCTTCCAAAAA
* ** *
15932411 AATTTTAAAAAATCCCGAACCATAAAAAGTTTTTAAAATCGTGAAAAATAAAAAACGAGTCGTCT
451 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
15932476 TCCCATAAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC-AGCCATAAAAATGGC
* * **
15932541 ATTTGCATGTAGAATATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCGTGGCTTG
580 ATTGGCATGCAGAA-ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * ** *
15932606 CGCATCCCGCCTCTCTAGCCGGCGTAGTGC-CTGCCCGCCCGTCCGTTTGCCTGCTCATTTTGTC
644 CGCATCCCGTCTCTCTGGCCGACGTAGTGCTC-GCCCGCCCG-CCGCCTGCC-GCTCGTTTTGT-
* * **
15932670 TGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTATGATCAGACCAGATCAAGGGTTATGACAG
705 TGTTGGCTTAGGCATACGGAGTTCATTCC-AGTCTAAGATCAGACCAGACCAAGGGTTACCACAG
* ** * * * *
15932735 CAGGATGGGCAGCACGTAGAAGGGGACACGGTCGATCCCCTGCTTACGCATCCCGCCCTTCTGGC
769 CAGGATGGGCAGCACGCAGAAGGGGACACGACCGAACCCCAGCTTACGCATCCCACCCCTCTGGC
* * * *
15932800 CGGCTGAGCGCCCGTACGCTTGTTTCGTGGGTTAACTTAGGCATACGGAGTTCATTCCCAGTCTA
834 CGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGGAGCTCATTCCCAGTCTA
15932865 AG
899 AG
* *
15932867 CATACGGAGTTCATTCCCAATCTAAGATTGGATCGGATCGAGGGTTGTGGCTGCACATGCTAGGC
1 CATACGGAGTTCATTCCCAATCTAAGATTGGAT-GGATCGAGGGTTGTGGCAGCACATGCTGGGC
* * ** * * *
15932932 TCGGGCATGTGCTGGTGCTGCATTTGTCTTCACCGGGGCACCATCGTCGGAGCATCGCCAGAGAA
65 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGTCGGAGAA
** *
15932997 CCTGACCGATAGCATTGGGGTTTCGACGATCGAGGGGGCCGGGGGGGTGTGCGCACATGATGTGT
130 CCTGACCGACGGCATTGGGGTTTCGACGATCG-GGGGGCCGGGGGGGTGTGCGCACATGATGTGC
*
15933062 GATGGGTGCTGGTACTT-GCCTTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
15933126 CCCCCTTAAAGAGCGTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATG
258 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
15933191 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGT
323 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
15933256 GCATT-CCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA-AAACTCCTTCCAATAA
388 GC-TTGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAGAAA-TCCTTCCAAAAA
* * * *
15933319 AATTTTAAAAAATCCTGAACCGTAAAAAGTTTCATAAGTCGTGAAAAATAGAAAACGAGTTGTCT
451 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
15933384 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGGATGAATTTACAGGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA-GCCATAAAAATGGC
15933449 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
580 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
15933514 GCATCCCGTCTCTCGGGTCGACATAGTGCTCGCCCGCCCGCCTGCCTGTCCGCTCGTTTCGTTGC
645 GCATCCCGTCTCTCTGGCCGACGTAGTGCTCGCCCGCCCGCC-GCCTG-CCGCTCGTTTTGTTG-
* ** *
15933579 TTGTCTTAGGCATACGGAGTTCATTCACAGTCTAAGATCAGACTGGACCAAGGGTTGCCACAGCA
707 TTGGCTTAGGCATACGGAGTTCATTC-CAGTCTAAGATCAGACCAGACCAAGGGTTACCACAGCA
* * * *
15933644 GGATTGGCAGCACGCAG-AGGGGTACCCGACCGAACCCCAGCTTGCGCATCCCACCCCTCTTGCC
771 GGATGGGCAGCACGCAGAAGGGG-ACACGACCGAACCCCAGCTTACGCATCCCACCCCTCTGGCC
* * *
15933708 GGCTGAGCGCCTGCACGCTCGTTTCATGGGTTGACTTAGGCATATGGAGCTCATTCCCAGTCTAA
835 GGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGGAGCTCATTCCCAGTCTAA
15933773 G
900 G
* *
15933774 CATACGGAGTTCATTCCCAATCAAAGATTGGACTGGATTGAGGGTTGTGGCAGCACATGCTGGGC
1 CATACGGAGTTCATTCCCAATCTAAGATTGGA-TGGATCGAGGGTTGTGGCAGCACATGCTGGGC
* * *
15933839 TTGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCGTCGGAGAA
65 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGTCGGAGAA
* * *
15933904 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGG-C-GGGGGGTGTGCGCACAT-ATGTGCG
130 CCTGACCGACGGCATTGGGGTTTCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCG
*
15933966 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTATCCCTCATCAAACCTCAAGAACTCACACC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
*
15934031 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTCTCTGAAATGGG
260 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
15934096 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
325 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * * *
15934161 TTGCCAACAAAAATACAAGGGTCACGTCTACCAAGTTTGGTGACAGAAATCCTTTCAAAAAAATT
390 TTGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAGAAATCCTTCCAAAAAAATT
* * * *
15934226 TTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTCCTCCTGCC
455 TTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
* *
15934291 ATGAAACTTCACGTGAAGGCTTAATGGACCATTGTATGAAGTTACTAGCCATAAAAATGGCATTG
520 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC-AGCCATAAAAATGGCATTG
*** * * * *
15934356 GCCCACAGAAATATGAAGATGTGCCTAAACCCACCTAGCACCCTATCGAACCACGACTTTCGCAT
584 GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
*
15934421 CCCGTCTCTCTGGCCGACGT--TG-T-GCCCGCCCG-C-CC-GCCCGCTCGTTTTGTCGATTGGC
649 CCCGTCTCTCTGGCCGACGTAGTGCTCGCCCGCCCGCCGCCTG-CCGCTCGTTTTGTTG-TTGGC
* * * * *
15934479 TTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGACAGCA
712 TTAGGCATACGGAGTTCATT-CCAGTCTAAGATCAGACCAGACCAAGGGTTACCACAGCA
15934539 CATGCTGGGC
Statistics
Matches: 1497, Mismatches: 156, Indels: 53
0.88 0.09 0.03
Matches are distributed among these distances:
895 70 0.05
896 3 0.00
898 1 0.00
899 9 0.01
900 1 0.00
901 2 0.00
902 2 0.00
903 426 0.28
904 33 0.02
905 1 0.00
906 14 0.01
907 398 0.27
908 350 0.23
909 66 0.04
910 121 0.08
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (900 bp):
CATACGGAGTTCATTCCCAATCTAAGATTGGATGGATCGAGGGTTGTGGCAGCACATGCTGGGCT
CGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGTCGGAGAAC
CTGACCGACGGCATTGGGGTTTCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCT
TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAGAAATCCTTCCAAAAAAATTT
TAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAGCCATAAAAATGGCATTGGC
ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
CGTCTCTCTGGCCGACGTAGTGCTCGCCCGCCCGCCGCCTGCCGCTCGTTTTGTTGTTGGCTTAG
GCATACGGAGTTCATTCCAGTCTAAGATCAGACCAGACCAAGGGTTACCACAGCAGGATGGGCAG
CACGCAGAAGGGGACACGACCGAACCCCAGCTTACGCATCCCACCCCTCTGGCCGGCTGAGCGCC
CGCACGCTCGTTTCATGGGTTAACTTAGGCATACGGAGCTCATTCCCAGTCTAAG
Found at i:15935380 original size:26 final size:26
Alignment explanation
Indices: 15935351--15935403 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15935341 GTTAATTTAG
15935351 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15935377 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15935403 G
1 G
15935404 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15935931 original size:896 final size:895
Alignment explanation
Indices: 15934483--15936139 Score: 2620
Period size: 896 Copynumber: 1.8 Consensus size: 895
15934473 ATTGGCTTAG
* * *
15934483 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCAACAACACATGCTGGG
* * *** ** *
15934548 CTCGGGAATGTGCTGGTGCCGTATTTTTCTTCGTTGGGGCACCATCGCCGAAGCTTCGCCGGAGA
66 CTCGGGAATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCGCCGGAGA
* * * * *
15934613 ACTTGACCTGCGGCATTGGGGTTCCAGCGATCGGGGGGGCCGGCGGGTGTGCGCACATGATGTGT
131 ACTTGACCAGCGGCAATAGGGTTCCAGCGATCGGGGGGGCCGGCGGGTGTGCGCACATCATGTGC
* * * ** *
15934678 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCTTGAGAACTCTCA
196 GATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAACTCACA
*
15934743 CCCCCTTAAAGAGCCTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
15934808 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
326 GGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGT
* * * *
15934873 GCATGCCAACAAAAATAAAAGGATCACATCTACCATGTTTGGGGCCAAAAATCCTTTCGAAAAAA
391 GAATGCCAAAAAAAATAAAAGGATCACATCTACCAAGTTTGGGGCCAAAAATCCTTTCCAAAAAA
* ** *
15934938 TTTTAAAAAATCTCGAACCCCAAAAAGTTTTGAAAATTGTGGAAAATAGAAAACGAGTCGTCTTG
456 TTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTCTTG
***
15935003 CCATGAAACTTCACGTGAAGGCTTAAGGACCATTGTATGAATTTCCAAGCCATAAAAATGGCATT
521 CCATGAAACTTCACGTGAAGGCTTAAGGACCATTGTATGAATGAACAAGCCATAAAAATGGCATT
* * * *
15935068 GGCACGTAGAAATATGAAGATGTGCCTAAAACCACCTACCACCCTATCGATCGATGGCTTGCGCA
586 GGCACGCAGAAATATGAAGATGTGCCTAAAACCACCTACCACACTATCGATCCACGGCTTGCGCA
* * *
15935133 TCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCG-CTCATTTCGTTGGTTGGCTTAGGCATA
651 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCTCATTTCGTCGGTTGGCTTAGGCATA
*
15935197 CGTAGTTCATTCCCAGTCTAAGATC-GAACCAGATCGAGGGTTGTGGCAGCAGGATCAGCAGCAT
716 CGAAGTTCATTCCCAGTCTAAGATCAG-ACCAGATCGAGGGTTGTGGCAGCAGGATCAGCAGCAT
15935261 GCGGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCTGGCGGAGCGCTCGT
780 GCGGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCTGGCGGAGCGCTCGT
15935326 ACGCTCGTTCCGTAGGTTAATTTAGGCATACGGAGTTCATTCCCAGTCTAA
845 ACGCTCGTTCCGTAGGTTAATTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15935377 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAACAACACATGCTGGG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCAACAACACATGCTGGG
* *
15935442 CTTGGGCATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCGCCGGAGA
66 CTCGGGAATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCGCCGGAGA
* * *
15935507 ACCTT-ACCAGCGGCAATAGGGTTTCGGCGATCGGGGGGGCCGGGGGGGTTGTGCGCACATCATG
131 A-CTTGACCAGCGGCAATAGGGTTCCAGCGATCGGGGGGGCC-GGCGGG-TGTGCGCACATCATG
**
15935571 TGCGATGGGTGCTGGTACTTGGTGCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAACTC
193 TGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAACTC
*** * *
15935636 ACACCTTTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGGA
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
15935701 ATGGGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTT
323 ATGGGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTT
* ** *
15935766 TGTGAATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCAAA
388 TGTGAATGCCAAAAAAAATAAAAGGATCACATCTACCAAGTTTGGGGCCAAAAATCCTTTCCAAA
15935830 AAATTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTC
453 AAATTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTC
15935895 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATGAACAAGCCATAAAAATGG
518 TTGCCATGAAACTTCACGTGAAGGCTTAA-GGACCATTGTATGAATGAACAAGCCATAAAAATGG
* *
15935960 CATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAGACTATCGATCCACGGCTTG
582 CATTGGCACGCAGAAATATGAAGATGTGCCTAAAACCACCTACCACACTATCGATCCACGGCTTG
* *
15936025 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACTCGTTTTGTCGGTTGGCTT
647 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG--C-CTCATTTCGTCGGTTGGCTT
15936090 AGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTG
709 AGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTG
15936140 CGACAGCACA
Statistics
Matches: 688, Mismatches: 66, Indels: 12
0.90 0.09 0.02
Matches are distributed among these distances:
894 147 0.21
895 104 0.15
896 372 0.54
900 64 0.09
901 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (895 bp):
GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCAACAACACATGCTGGG
CTCGGGAATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCGCCGGAGA
ACTTGACCAGCGGCAATAGGGTTCCAGCGATCGGGGGGGCCGGCGGGTGTGCGCACATCATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGT
GAATGCCAAAAAAAATAAAAGGATCACATCTACCAAGTTTGGGGCCAAAAATCCTTTCCAAAAAA
TTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGACCATTGTATGAATGAACAAGCCATAAAAATGGCATT
GGCACGCAGAAATATGAAGATGTGCCTAAAACCACCTACCACACTATCGATCCACGGCTTGCGCA
TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCTCATTTCGTCGGTTGGCTTAGGCATA
CGAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCAGGATCAGCAGCATG
CGGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCTGGCGGAGCGCTCGTA
CGCTCGTTCCGTAGGTTAATTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:15936746 original size:714 final size:711
Alignment explanation
Indices: 15935377--15936849 Score: 2205
Period size: 714 Copynumber: 2.1 Consensus size: 711
15935367 CCCAGTCTAA
* *
15935377 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAACAACACATGCTGGG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGGTTGCAACAACACATGCTGGG
**** * *
15935442 CTTGGGCATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCGCCGGAGA
66 CCCAAGAATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCACCGGAGA
* *
15935507 ACCTTACCAGCGGCAATAGGGTTTCGGCGATCGGGGGGGCCGGGGGGGTTGTGCGCACATCATGT
131 ACCTTACCAGCGGCAATAGGGTTCCAGCGATCGGGGGGGCCGGGGGGGTTGTGCGCACATCATGT
** *
15935572 GCGATGGGTGCTGGTACTTGGTGCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAACTCA
196 GCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAAATCA
*** * *
15935637 CACCTTTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGGAA
261 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
15935702 TGGGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTT
326 TGGGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTT
* * * * *
15935767 GTGAATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
391 GTGAATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTAGGGCCAAAAATCCTTCAAAAAA
* * *
15935832 ATTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATTGTGGAAAATAGAAAACAAGTCGTCTT
456 ATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTCTT
*
15935897 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATGAACAAGCCATAAAAATGGCA
521 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATGAACAAGCCATAAAAATGGCA
* * *
15935962 TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAGACTATCGATCCACGGCTTGCG
586 TTGGCACACAGAAATATGAAGATGTGCCTAAAACCACCTACCACACTATCGATCCACGGCTTGCG
* *
15936027 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACTCGTTTTGTCGGTTGGCTTAG
651 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG----CTCATTTCGTCGGTTGGCTTAG
* * *
15936092 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGGTTGCAACAACACATGCTGGG
* * ** ** *
15936157 CCCAAGAATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGAAGCTTCACCGGAGA
66 CCCAAGAATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCACCGGAGA
* * *
15936222 A-CTTGACCGGCGGCATTAGGGTTCCAGCGATCGGGGGGGCCGGGGGGG-TGTGCGCACATGATG
131 ACCTT-ACCAGCGGCAATAGGGTTCCAGCGATCGGGGGGGCCGGGGGGGTTGTGCGCACATCATG
* * **
15936285 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAAATC
195 TGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAAATC
* *
15936350 GCACCCCCTTAAAGAGCCTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
260 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
15936415 ATGTGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
325 ATGGGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTT
* * *
15936480 TGTGCATGCCAACAAAAATAAAAGGATCACGTCTACCATGTTTAGGGCCAAAAATCCTTTCAAAA
390 TGTGAATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTAGGGCCAAAAATCC-TTCAAAA
** ** *
15936545 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTC
454 AAATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTC
***
15936610 TTGCCATGAAACTTCACGTGAAGGCTTAA-GGACCATTATATGAATTTCCAAGCCATAAAAATGG
519 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATGAACAAGCCATAAAAATGG
* * * *
15936674 CATTGGCACATAGAAATATGAAGATGTGCCTAAAACCACCTACCACCCTATCGATCGATGGCTTG
584 CATTGGCACACAGAAATATGAAGATGTGCCTAAAACCACCTACCACACTATCGATCCACGGCTTG
* * *
15936739 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCATTTCGTTGGTTGGCTTAG
649 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTTAG
* *
15936802 GCATACGTAGTTCATTCCCAGTTTAAGATCGGACCAGATCGAGGGTTG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGGTTG
15936850 TGGCAGCAAG
Statistics
Matches: 681, Mismatches: 75, Indels: 9
0.89 0.10 0.01
Matches are distributed among these distances:
710 64 0.09
714 373 0.55
715 244 0.36
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (711 bp):
GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGGTTGCAACAACACATGCTGGG
CCCAAGAATGTGCTGGCGCCGCATTTTTCTTCACCGGGGCACCATCAACGAAGCATCACCGGAGA
ACCTTACCAGCGGCAATAGGGTTCCAGCGATCGGGGGGGCCGGGGGGGTTGTGCGCACATCATGT
GCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCACCAAACCTCAAGAAATCA
CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
TGGGGACACTTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTT
GTGAATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTAGGGCCAAAAATCCTTCAAAAAA
ATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTCTT
GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATGAACAAGCCATAAAAATGGCA
TTGGCACACAGAAATATGAAGATGTGCCTAAAACCACCTACCACACTATCGATCCACGGCTTGCG
CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTTAG
Found at i:15936990 original size:26 final size:26
Alignment explanation
Indices: 15936961--15937013 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15936951 GTTGATTTAG
15936961 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
15936987 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
15937013 G
1 G
15937014 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:15937909 original size:26 final size:26
Alignment explanation
Indices: 15937873--15937925 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15937863 GTTGACCTAG
* * *
15937873 GCATGCGGAGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15937899 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15937925 G
1 G
15937926 ATCGGATCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:15938359 original size:28 final size:28
Alignment explanation
Indices: 15938300--15938360 Score: 81
Period size: 27 Copynumber: 2.2 Consensus size: 28
15938290 CATGTCTACC
* *
15938300 AAAAAAATTTTAAAAAATCTTGAACCGT
1 AAAAAAATTTTAAAAAATCGTGAACAGT
15938328 AAAAAAATTTT-AAAAATCGTG-ACAAGT
1 AAAAAAATTTTAAAAAATCGTGAAC-AGT
15938355 AAAAAA
1 AAAAAA
15938361 TGAGTCGTCT
Statistics
Matches: 30, Mismatches: 2, Indels: 3
0.86 0.06 0.09
Matches are distributed among these distances:
26 2 0.07
27 17 0.57
28 11 0.37
ACGTcount: A:0.59, C:0.08, G:0.08, T:0.25
Consensus pattern (28 bp):
AAAAAAATTTTAAAAAATCGTGAACAGT
Found at i:15939618 original size:26 final size:26
Alignment explanation
Indices: 15939588--15939640 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15939578 GTTGACTTAG
*
15939588 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAATCTAA
15939614 GCATATGGAGTTCATTCCCAATCTAA
1 GCATATGGAGTTCATTCCCAATCTAA
15939640 G
1 G
15939641 ATCAGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAATCTAA
Found at i:15940535 original size:26 final size:25
Alignment explanation
Indices: 15940499--15940550 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
15940489 GTTGACTTAG
15940499 GCATACAGAGTTCATTCGCAGTCTAA
1 GCATACAGAGTTCATTC-CAGTCTAA
*
15940525 GCATACGGAGTTCATTCCAGTCTAA
1 GCATACAGAGTTCATTCCAGTCTAA
15940550 G
1 G
15940551 ATCGAACGAG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 9 0.36
26 16 0.64
ACGTcount: A:0.29, C:0.23, G:0.21, T:0.27
Consensus pattern (25 bp):
GCATACAGAGTTCATTCCAGTCTAA
Found at i:15941437 original size:26 final size:26
Alignment explanation
Indices: 15941401--15941453 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15941391 GTTGACTTAG
* *
15941401 GCATACAGAGTTCTTTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
15941427 GCATACAGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
15941453 G
1 G
15941454 GTCAGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.15, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:15943719 original size:889 final size:892
Alignment explanation
Indices: 15938722--15946344 Score: 9511
Period size: 889 Copynumber: 8.5 Consensus size: 892
15938712 GTTGACTTAG
* * * * * *
15938722 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGATGGTTGCGGTAGCACATACTGCG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
15938787 CTCGGGCATGTGGTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGTAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
15938852 ACCTGACCGGTGGCATTGGGGTTCCGACGATCGAAGGGGCCAGGGGGGTGTGTGCACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATCG-GGGGGCC-GGGGGGTGTGCGCACATGATGTG
* * *
15938917 TGATGGGTGCTGGTGCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
15938982 AGCCCCTTAAACAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAAT
*
15939047 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTCTTAGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
15939112 TGCATGCCAACAAAAATACAAGGATCAGGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGGAAAA
389 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
*
15939177 ATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAGCGAGTCGTCTT
454 ATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
15939242 GCCATGAAACTTCACGTGAAGGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * **
15939307 TTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCG
584 TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCG
* * * * *
15939372 CATCCCGTCTCTCTGGCCGACATAGTGCCCGCCCACCCGTCCACCCGTTCATTTCGTCGGCTGGC
649 CATCCCGTCTCTCTGGCCG-C-GAGTGCCCG----CCCG--C-GCCGCTCGTTTCGTCGGTTGGC
*
15939437 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGACCGAA-GGTT------GC-GG--
705 TTAGGCATACGAAGTTCATTCCCAGTCTAAGATTGGACCGGACC-AAGGGTTACAGCAGCAGGAT
* * * *
15939492 CTGCA-CA--CAGAGGGGGACCC-AGTCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
769 CGGCAGCACGCAGA-GGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCTCCCCTCTGGCCGGCT
* *
15939553 GAGT-GCCCGCACACTCGTTTCATGGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAA
832 GA-TCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
15939614 GCATATGGAGTTCATTCCCAATCTAAGATCAGA-TCAGACCGAGTGTTGTGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACT-AGACCGAGGGTTGCGGCAGCACATGCTGG
* * ** * *
15939678 GCTCGGGCATGTGCTGGTGCCGCAATTTTCTTCACCAGGGCACCATCGTCGGAGCATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAG
*
15939743 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGGTGTGTGCACATGATGT
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCC--GGGGGGTGTGCGCACATGATGT
*
15939808 GCGATGGGTGCTGGTGCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * *
15939873 CAGCCCCTTAAACAGCATTTGAGATTTTACAGGTTTGCTCCCAGTAGCCATTAAAGTGTCCTGAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-TTGAA
*
15939938 ATGGGGACCATTTTTTTTCAAAATGGTCACAGAAATCTTGTACACTTCGAGTTTTTAGCTGAA-T
322 ATGGGGA-CA-CTTTTTTC-AAATGGTCACA-AAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * *
15940002 TTTTTGTGGCATGCCAA-ACAAAATACAACGATCAGGTCTACCAAGTTTGGGGCCAAAAAATCCT
383 TTTTTGT-GCATGCCAACA-AAAATACAAGGATCATGTCTACCAAGTTTGGGGCC-AAAACTCCT
* * * * * *
15940066 CATTCAAAAAAATTTTTAAAAATCCCAAAACC-TCAAAAGTTTTGAAAAGTCGT-AAAAATAGAA
445 --TCCGAAAAAATTTTAAAAAATCCC-AAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAA
*
15940129 AACGACGTCGTCTTGCCATGAAACTTCA-GTG-AGGCTTAAGGGACCAAACTGT-TGAATTT-CA
506 AACGA-GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC--ATTGTATGAATTTACA
* * * * * *
15940190 AGCCATAAAAAATGGCATTGGCATGTAGCCAATATTAAGATGTG-CT-AACCCACTTTA-CA-CG
568 AGCCAT-AAAAATGGCATTGGCACGCAG-AAATATGAAGATGTGCCTAAACCCAC-CTACCACCC
*
15940251 TATCGATCCAACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCTCGTCCACT
630 TATCGATCC-ATGGCTTGCGCATCCCGTCTCTCTGGCC-GCG-AGTGCCCGCCCG--CG--C-C-
* * *** * *
15940316 TGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCTCAGTCTAAGATCAAACCGGATCG
686 -GCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATTGGACCGGACCA
* * * * * * * * *
15940381 AGGATTGCAGCAACAGGATCGGCAACACGTAGAAGGGGACCCGATCGAACCTCGGCTTACGCATC
750 AGGGTTACAGCAGCAGGATCGGCAGCACGCAG-AGGGGACCCGACCGATCCCCGGCTTGCGCATC
* * * * * * ** * *
15940446 TCGCCCTTTTGGCCGGCTGAGCGCCCGTACGCTTATTTCGTGGGTTGACTTAGGCATACAGAGTT
814 CCTCCCCTCTGGCCGGCTGATCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTT
*
15940511 CATTCGCAGTCTAA
879 CATTCCCAGTCTAA
* * * * *
15940525 GCATACGGAGTTCATT-CCAGTCTAAGATCGAACGAGACCAAGGGTTGCAGCAGCTCATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* **
15940589 CTCGGGCATGTGCTGGTGCCACCTTTTTCTTTATCGGGGCACCATCG-C----CA------GAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
15940643 ACCTGACCGACGGCATTGGGGTTCCGACGATCAGAGGGGCCGGGGGGTGTGCGCACGTGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
15940708 GATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
*
15940773 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATA
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATG
* * * * * *
15940838 GGGACACTTTTTTCGAATGGTAACAAAATCTTGTACACATCAAGGTTTTAGCTGAATGTTTTTGT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
15940903 GCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAA
390 GCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * **
15940968 TTTTAAAAAATCTCGAGCCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
455 TTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
15941033 CCATGAAACTTCACGTGAAGGCGTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
520 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * *
15941098 TGGCACACAGAAATAGGAAGATGTGCCTAAACCCACTTACCACCCTATCGATCCATGGCTTGCGC
585 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
15941163 ATCCCGTCTCTCTGGCCGACGTAGTGCTCACCCTCCCGTTCGCCCGCCAGCCCGCCCGCTCGTTT
650 ATCCCGTCTCTCTGGCCG-CG-AGTG---------CC---CG--C-CC-G--CG-CCGCTCGTTT
** * * * **
15941228 CGTCGGTTGGCTTAGGCATAC-AGAGTTCATTCCCAGTCTAAGATCAGACTGGATCGAGGGTTGT
694 CGTCGGTTGGCTTAGGCATACGA-AGTTCATTCCCAGTCTAAGATTGGACCGGACCAAGGGTTAC
* * * * *
15941292 GGCAGTAGAACCGGCAGCACGCAGAGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGT-CCCT
758 AGCAGCAGGATCGGCAGCACGCAGAGGGGACCCGACCGATCCCCGGCTTGCGCATCCC-TCCCCT
** * *
15941356 CTGGCCGATTGAGT-GCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCTTTCCC
822 CTGGCCGGCTGA-TCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCC
15941420 AGTCTAA
886 AGTCTAA
* * * * * * * * * * *
15941427 GCATACAGAGTTCATTCCCAATCTAAGGTCAGACTGGACCAAAGGTTGCAGCGGCACACGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * **
15941492 CTCAGGCATGTGCTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCATCGGAGCATCGTTGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * * * *
15941557 ACCTGACCGACCGCATTGGGGTTCCGGCGATTGGGGGGGCCGGCGGGTGTGTGCACATGATGTGT
131 ACCTGACCGGCGGCATTGGGGTTCCGACGA-TCGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
15941622 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
15941687 CCCCCTTAAAGAGCATTTGAGATTTCACTGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATG
*
15941752 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTAT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* ** * *
15941817 GCATGCCAACAAAAATACAAGGGTCACATCTACCAAGTTTGGGGCCCAAGCTCCTTCC-AAAAAA
390 GCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * * * *
15941881 TTTTAAAAAATCCCAAACTGCAGAAAGTTTAAAAAATCATGAAAAATAGAAAACGAGTCATCTTG
455 TTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
15941946 CCATGAGACTTCAGGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
520 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
***
15942011 TGGCACGCAGAAATATGAAGATGCAACTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
585 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
* * *
15942076 ATCTCGTCTCTCTGG-C-CG-GTGCCCGCCCG-ACCGCTCGTTTTGTCGGTTGGCTTAGGCATAC
650 ATCCCGTCTCTCTGGCCGCGAGTGCCCGCCCGCGCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * *
15942137 GGAGTTCATTCCCCGATATAAGATTGGACCGGACCAAGGGTTACAGCAGTAGGAT-GGCAGCACG
715 GAAGTTCATTCCCAG-TCTAAGATTGGACCGGACCAAGGGTTACAGCAGCAGGATCGGCAGCACG
* * *
15942201 TAGCAGGGGACCCGACCGATCCCCAGCTTGGGCATCCCTCCCCTCTGGCCGGCTGATCGCCCGCA
779 CAG-AGGGGACCCGACCGATCCCCGGCTTGCGCATCCCTCCCCTCTGGCCGGCTGATCGCCCGCA
* *
15942266 CGCTCGTTTCGTGGGTTGACTTAGGCTTACGGAGTTCATTCCCAGTCTAA
843 CGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15942316 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
15942381 CTC-AGCATGTGCTGGTGCCACATTTTTCCTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
15942445 ACCTAACTGGCGGTATTGAGGTTCCGACGATCGGGGGTCCGGGGGGTGTGCGCACATGATGTGCG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
*
15942510 ATGGGAGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
196 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * * *
15942575 CCCCTTGAAGAGCATTTGAGATTTTATAGGTTTGCTGCCATTAGCCATTAAAGTGTCTGAAATGG
261 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGG
*
15942640 GGACAGTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
326 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT-
* * * *
15942705 GC-TGCTAACAAAAATACAAGTATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAA
390 GCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
** *
15942769 TTTTAAAAAATCCCAAACCGTAAAAAGTTTTGAAAATCGTAAAAAATAGAAAACGAGTCGTCTTG
455 TTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
15942834 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
520 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* ***
15942899 TGGCATGCAGAAATATGAAGATGCAACTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
585 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
* *
15942964 ATCTCGTCTCTCTGG-C-CG-GTGCCCGCCCG-GCCGCTCGTTTTGTCGGTTGGCTTAGGCATAC
650 ATCCCGTCTCTCTGGCCGCGAGTGCCCGCCCGCGCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * *
15943025 GAAGTTCATTCCCCA-TATAAGATTGGACCGGACCAAGGGTTACAGCAGTAGGATTGGCAGCACG
715 GAAGTTCATT-CCCAGTCTAAGATTGGACCGGACCAAGGGTTACAGCAGCAGGATCGGCAGCACG
* * *
15943089 TAGCAGGGGACCCGACCGATCCCCAGCTTGGGCATCCCTCCCCTCTGGCCGGCTGATCGCCCGCA
779 CAG-AGGGGACCCGACCGATCCCCGGCTTGCGCATCCCTCCCCTCTGGCCGGCTGATCGCCCGCA
* * * *
15943154 CGCTCGTTTCGTGGGTTGACTTAGGCTTAGGGAGTTTATTCCCAGTCTAA
843 CGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15943204 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
** *
15943269 CTCAAGCATGTGCTGGTGCCACATTTTTCCTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * * *
15943334 ACCTAACTGGCGGTATTGAGGTTCCGACGATCTGGGGTCCGGGGGGTGTGCGCACATGATGTGCG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
*
15943399 ATGGGAGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
196 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
15943464 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATAG
261 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGG
* * * * *
15943529 GGACACTTTTTTCAAATGGTAACAAAATCTTGTACACATCAAGGTTTTAGCTGAATGTTTTTGTG
326 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
15943594 CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAAT
391 CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
** * *
15943659 TTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGACAAATAGAAAACGAGTCGTCTTGC
456 TTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
* *
15943724 CATGAAACTTCACGGGAAGGCTTAAGGGA-CAGTTGTATGAATTTACAAGCCATAAAAATGGCTT
521 CATGAAACTTCACGTGAAGGCTTAAGGGACCA-TTGTATGAATTTACAAGCCATAAAAATGGCAT
* *
15943788 TAGG-ATGCAGAAATATGAAGATGTGCCTAAACCCACCCTACCACCCTATCGATCCACGGCTTGC
585 T-GGCACGCAGAAATATGAAGATGTGCCTAAACCCA-CCTACCACCCTATCGATCCATGGCTTGC
* * * * *
15943852 GCATCCCGTCTCTCCGGTCGGCGTAGTGCCTACCTGCTCGCCCACCCGCTCGTTTCGTCAGTTGG
648 GCATCCCGTCTCTCTGG-CCGCG-AGTG-C--CC-GC-C-CGC-GCCGCTCGTTTCGTCGGTTGG
* * ** ** * *
15943917 CTTAGGCATATGAAGTTCAGTCCCAGTCTAAGATTGGA-TTG----AGGGTT-GTGACAACAAGA
704 CTTAGGCATACGAAGTTCATTCCCAGTCTAAGATTGGACCGGACCAAGGGTTACAG-CAGCAGGA
* * *
15943976 TCGGCAGTACACAGAGGGAGACCC-AGCCGATCCCCGGCTTGCACAT-CCTGCCCCTCTGGCCGG
768 TCGGCAGCACGCAGAGGG-GACCCGA-CCGATCCCCGGCTTGCGCATCCCT-CCCCTCTGGCCGG
** * *
15944039 CTGATCGCTTGCACGCTCGTTTCATGGGTTGACTTAGGCATATGGAGTTCTTTCCCAGTCTAA
830 CTGATCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
15944102 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATTGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
15944167 CTCGGGCATGTGCTGGTGCCACATTTTTCTACGTCGGGGCACCATCGCCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
*
15944232 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGGTGTGCGCACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGG-CCGGGGGGTGTGCGCACATGATGTG
* *
15944297 TGATGGGTGCTGGTACTTGGCACTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * **
15944362 ACCACCTTAAAGAGCATATGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGCCTTTGATAA
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGA-AA
* *
15944427 TGGGGACACGTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * ** * *
15944492 GTGCATGCCAAAAAAAATATAGGGATCACCTCTACCAAGTTTGGGGGCAAAACTCCTTCCAAAAA
388 GTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * *
15944557 AATTTTAAAAAATCCCGAACCATAAAAAATTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCT
453 AATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
**
15944622 TGCCATGAAACTTCACGTGAAGGCTTAAAAGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
15944687 ATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCAAGGCTTGC
583 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGC
* *
15944752 GCATCCCGTCTTTTTGGCCGACGTAGTGCCCGCCCGCCCGCCCTCCCGCCCGCTCGTTTCGTCGG
648 GCATCCCGTCTCTCTGGCCG-CG-AGT----GCCCGCCCG------CG-CCGCTCGTTTCGTCGG
* * * * * ** ** *
15944817 TTGGCTTAGGTATACGGAGTTCATTCCTAGTCTAAGGTTGGACCAGATTGAA-GGTTATGGTAGC
700 TTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATTGGACCGGA-CCAAGGGTTACAGCAGC
* * * * *
15944881 AGGATCGGCAGCAAGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCACCCCTCTAGCT
764 AGGATCGGCAGCACGCAGA-GGGGACCCGACCGATCCCCGGCTTGCGCATCCCTCCCCTCTGGCC
* * * * *
15944946 GGCTGAGCACCCGCACGCTCATTTCATGGGTTGACATAGGCATACGGAGTTCATTCCCAGTATAA
828 GGCTGATCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
15945011 G-AT-CGGGAGTTCATTCCAAGTCTAAGATCGGACTGGACTGAGGGTTACGGTAGCACATG-TCG
1 GCATAC-GGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCT-G
* *
15945073 GGCTTGAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCA---T-----CA---CCGGA
64 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGA
** * * * *
15945127 GAACCTGTTCGGCGGCATTAGGGTTTCGGCGATCGGAGGGCCCGGGGGGTGTGCGCACATGATGT
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGGCCGGGGGGTGTGCGCACATGATGT
* * * *
15945192 GCGATGGGTGCTGGTACTTTG-CCTTATATTGGCACCCAATCCCTCATCGAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * * * *
15945256 CACCCCCATAAAGAGCATTTGAGACTTTACAGGTTTGCTGCTAGCAACCATTAAAGTGTTTTAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAA
** *
15945321 CAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATATTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
15945386 GTGCATGCCAACAAAAATTCAAGGATCATGTCTACCAAGATTGGGGCCAAAA-ACCTTCCAAAAA
388 GTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
**** * ** * *
15945450 AATTTTAAAAAATTTTGAACCGTAGAAAGTTTTGAATATCGTGAAAAATAGAAAACGAGTTGTCT
453 AATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
15945515 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
15945580 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACTTACCACCCTATCGATCCATGGCTTGT
583 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGC
* ** * * *
15945645 GTATCATGTCTCTCTGGCCGTCGTAGTGCCCGCCCGCCCGCCCGCACGCTCGTTCCATCGATTGG
648 GCATCCCGTCTCTCTGGCCG-CG-AGT----GCCCGCCCG--CGC-CGCTCGTTTCGTCGGTTGG
* ** ** * ** *
15945710 CTTAGGCATACGGAGTTCATTCTTAGTCTAAGATCAGATCGGACCAAGGGTTGTAGGAGCAGGAT
704 CTTAGGCATACGAAGTTCATTCCCAGTCTAAGATTGGACCGGACCAAGGGTTACAGCAGCAGGAT
* * *
15945775 CGGCAGCACGCA-AGGGGGACCCGACTGATCCCCGGCTTGCGCAT-CCTGCCCTTCTGGCTGGCT
769 CGGCAGCACGCAGA-GGGGACCCGACCGATCCCCGGCTTGCGCATCCCT-CCCCTCTGGCCGGCT
* * * * *
15945838 GAGCGCCCGCACACTTGTTTCGTGGGTTGACATAGGCATACGGAGTTCATTCCCAGTCTAA
832 GATCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ** *
15945899 GCATACAGAGTTCAATCCCAGTCTAAGATCAGAC-CGAACCGAGGGTCACGGTAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAG-ACCGAGGGTTGCGGCAGCACATGCTGG
* * * * * *
15945963 GCTCGAGCATGTACTGGTGCCACCTTTTTCTTC-ACTGGGGCACCATCGTCGAAGCATCACCGGA
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGCCGGA
* * * * * *
15946027 GAACCTGACCGACGGCATTGGTGTTCCGATGATCGGTTGGGTCGGGCTGGGTGTGCACACATGAT
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGGCCGGG--GGGTGTGCGCACATGAT
* *
15946092 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACT
191 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * * *
15946157 CACA--CCCTTAAAGAGCATTTGAGATTTTGCAAGTTTGCTGCCAGGAGCCATTAAAGTGTCTGA
256 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGA
* * *
15946220 AATAGGGACACTTTTTTCAAATCGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTT
321 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* *
15946285 TTGTGCATGCCAACAAAAATATAAGGATCATGTTTACCAAGTTTGGGGCCAAAACTCCTT
386 TTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTT
15946345 GGGATGCGTA
Statistics
Matches: 5942, Mismatches: 613, Indels: 342
0.86 0.09 0.05
Matches are distributed among these distances:
887 303 0.05
888 691 0.12
889 918 0.15
890 122 0.02
891 70 0.01
892 306 0.05
893 306 0.05
894 126 0.02
895 114 0.02
896 70 0.01
897 132 0.02
898 422 0.07
899 168 0.03
900 319 0.05
901 485 0.08
902 155 0.03
903 253 0.04
904 54 0.01
905 6 0.00
906 6 0.00
907 6 0.00
908 104 0.02
909 113 0.02
910 89 0.01
911 110 0.02
912 3 0.00
913 196 0.03
914 294 0.05
915 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (892 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGG
GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
TTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCA
TCCCGTCTCTCTGGCCGCGAGTGCCCGCCCGCGCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
AAGTTCATTCCCAGTCTAAGATTGGACCGGACCAAGGGTTACAGCAGCAGGATCGGCAGCACGCA
GAGGGGACCCGACCGATCCCCGGCTTGCGCATCCCTCCCCTCTGGCCGGCTGATCGCCCGCACGC
TCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:15944112 original size:26 final size:26
Alignment explanation
Indices: 15944076--15944128 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15944066 GTTGACTTAG
* *
15944076 GCATATGGAGTTCTTTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15944102 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
15944128 G
1 G
15944129 ATCGGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.25, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:15945020 original size:25 final size:25
Alignment explanation
Indices: 15944991--15945041 Score: 84
Period size: 25 Copynumber: 2.0 Consensus size: 25
15944981 ATAGGCATAC
*
15944991 GGAGTTCATTCCCAGTATAAGATCG
1 GGAGTTCATTCCAAGTATAAGATCG
*
15945016 GGAGTTCATTCCAAGTCTAAGATCG
1 GGAGTTCATTCCAAGTATAAGATCG
15945041 G
1 G
15945042 ACTGGACTGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
25 24 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.27
Consensus pattern (25 bp):
GGAGTTCATTCCAAGTATAAGATCG
Found at i:15945909 original size:26 final size:26
Alignment explanation
Indices: 15945873--15945925 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15945863 GTTGACATAG
* *
15945873 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCAATCCCAGTCTAA
15945899 GCATACAGAGTTCAATCCCAGTCTAA
1 GCATACAGAGTTCAATCCCAGTCTAA
15945925 G
1 G
15945926 ATCAGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACAGAGTTCAATCCCAGTCTAA
Found at i:15947167 original size:26 final size:26
Alignment explanation
Indices: 15947131--15947183 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15947121 CCAATCCAAT
* *
15947131 CTTAGATTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15947157 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15947183 C
1 C
15947184 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15948560 original size:901 final size:895
Alignment explanation
Indices: 15946384--15949060 Score: 3569
Period size: 901 Copynumber: 3.0 Consensus size: 895
15946374 CTCTCTCTAT
* * * * * * * * * * *
15946384 GTGCTGCCTATCCTACTGTAGCAATCCTCGGTTCGATCCGATCTTAAACTAGAAATGAACTCTGT
1 GTGCTACCGATCCTACTCTCGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCGT
* * * * **
15946449 ATGCATAAGCCAACCGACGAAACGAACGGGCGGGTGGGCAGGCAGACACTACACCAACCAGAGAG
66 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC-GG--G-CACTACGCCGGCCAGAGAG
* * *
15946514 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGCTGGGTTTAGGCACATCTTAATATTTCTA
127 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* *
15946579 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGT
192 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * * *
15946644 TTCATGGCAAGATGACTTGTTTTCTATTTTTCACGATTTTTAAAATTTTTTGCAGTTCGGGAGTT
257 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTT
*
15946709 TTTAAAATTTTTTCGAAAGGATTCTTGGCCCCAAACTTGGTAGACGTCATCCTTGTATTTTTGTT
322 TTTAAAATTTTTTCGGAAGGATT-TTGGCCCCAAACTTGGTAGACGTCATCC-TGTATTTTTGTT
* * * **
15946774 GGCATGCACAAAAAAATTCAGCTAAAACCTCGAAGTGTAGAAGATTTTGTGACCATTTTACGAAA
385 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * * * * *
15946839 GTGTCCCCATTTTAGACATTTTAATGTCTACTGGCAGCAAACTTGT-AAATCTCAAATGCCCTTT
450 GTGACCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
*
15946903 AAGGCGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
515 AAGGCGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* *
15946968 ACCCATCGTACATCATGTGCGCACACCCCCC--GG-CCCCCCGATCACCGGAACCCCAATGCCGC
580 ACCCATCGCACATCATGTGCGCACACCCCCCTTGGCCCCCCCGATCACCGGAACCCCAATGCCAC
* * *
15947030 C-AGTCAGG-T-T---C--T-CT--GGAGATGGTGCCCCAACGAAGAAAAATGCGGCCCCAACAC
645 CGA-TCAGGTTCTCCGCGATGCTCCGGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAGCAC
* * ** * *
15947084 ATGCCCGAGCCCAACATGTGCTGCCGTAACCCTTGATCCAATCCAATCTTAGATTGGGAATGAAC
708 ATGCCCGAGCCCAACATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * *
15947149 TCCTTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGCGCAGG
773 TCCATATGCTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GG
* * * * *
15947214 TGCTCAGCCGGCCAGAGGGGCGAAATGCGCAAGTCAGGGATCGGCTGGGTCCCCCTCTGC
836 TGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCAGGGATCGACCGAGTCCCCCTCTGC
* * **
15947274 GTGCTACCGATCCTGCTGTCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGT
1 GTGCTACCGATCCTACTCTCGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCGT
* * *
15947339 ATGCCTAAGCCAACCGACAAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAT
66 ATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAG
* * *
15947404 ACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGTACATCTTCATATTTCTG
127 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* * * *
15947469 CGTGCCAATGCCATTTTTATGGCTTGTAAATCCATACAATGGTCCTTTAAGACTTCGCGTGAAGT
192 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * *
15947534 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAGCTTTTTGTGGTTCGGGATTT
257 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTT
* * * * *
15947599 TTTAAAATTTTTTTGGAAGCATTTTTGGCCCCAAACTTGGTAGATGTGATCCCTGTATTTTTTTT
322 TTTAAAATTTTTTCGGAAGGA-TTTTGGCCCCAAACTTGGTAGACGTCAT-CCTGTATTTTTGTT
15947664 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
385 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
15947729 GTGACCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAGTGCTCTTT
450 GTGACCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
15947794 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGC
515 AAGGCGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* ** *
15947859 ACCCATCACACATCATGTGCGCACACCCCCCTTGGCCCCCCCGAAT-TTCGGAACCCCAACGCCA
580 ACCCATCGCACATCATGTGCGCACACCCCCCTTGGCCCCCCCG-ATCACCGGAACCCCAATGCCA
*
15947923 CCGATCAGGTTCTCCGACGATGCTCCGGCGATAGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
644 CCGATCAGGTTCTCCG-CGATGCTCCGGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAGCA
* * * * * *
15947988 CATGCTCGAGCCCAAGATGTGCTGTCGTAACCCTCGGTTCGGTGCGATCTTAGACTGGGAAAGAA
707 CATGCCCGAGCCCAACATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
*
15948053 CTCCATATGCTTTGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
772 CTCCATATGCTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * *
15948118 ACGCTCAGTCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATTGACCGAGTCCCCCTCTAG-
836 -TGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCAGGGATCGACCGAGTCCCCCTCT-GC
** ** * * *
15948179 GTGCTGTCGATCCTACTACT-GCATTCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCG
1 GTGCTACCGATCCTACT-CTCGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCG
* * * *
15948243 TATGCCTAAGCCATCCGACGGAACGAGCGGACGGGCGAGCGGGCACTACGCCGGCCAGAGAGACG
65 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* *
15948308 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGTGT
130 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGT
15948373 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
195 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * *
15948438 ATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTT
260 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTT
15948503 AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTCATCCTGGTATTTTTGTTGGC
325 AAAATTTTTTCGGAAGGA-TTTTGGCCCCAAACTTGGTAGACGTCATCCT-GTATTTTTGTTGGC
* * *
15948568 ATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAATGT-
388 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * **
15948632 ATCCCCATTACAAACACTTTAATGGCTACTGGCAGCAAACCTGTATTATCTCAAATGCTCTTTAA
453 A-CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
15948697 GGCGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
517 GGCGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* *
15948762 CCATCGCACATCATGTGCGCACACCCCTCCCCCTCCCCCTGGCCCGCCCGATCGCCGGAACCCCA
582 CCATCGCACATCATGTGCGCACA---C-CCCCCT-----TGGCCCCCCCGATCACCGGAACCCCA
* * * * * ** *
15948827 ATGCCACCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCAGCTAGGAAAAGCGTGGCA
638 ATGCCACCGATCAGGTTCTCC-GCGATGCTCCGGCGATGGTGCCCCA-CGAAGAAAAATGCGGCA
* * * *
15948892 CCAGCACATGCCCGAGCCCATCATGTGCTACCGCAACCCTCGGTCCGGTCCGATCTTCGACTGGG
701 CCAGCACATGCCCGAGCCCAACATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGG
* * *
15948957 AATGAACTCCGTATGCTTAGACTGAGAATGAACTCCGTATGCCGAAGTCAACCCATGAAACGAGC
766 AATGAACTCCATATGCTTAGACTG-GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
15949022 GTGCGGGTGCTCAGCCGGCCAGAGGGG-G-GATGCGCAAGC
830 GTGC-GGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGC
15949061 TGATGATCAG
Statistics
Matches: 1563, Mismatches: 182, Indels: 66
0.86 0.10 0.04
Matches are distributed among these distances:
890 418 0.27
891 112 0.07
893 4 0.00
894 40 0.03
895 4 0.00
896 1 0.00
900 5 0.00
901 471 0.30
902 1 0.00
903 2 0.00
904 3 0.00
905 274 0.18
906 2 0.00
908 11 0.01
909 5 0.00
910 207 0.13
911 3 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (895 bp):
GTGCTACCGATCCTACTCTCGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCGT
ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGG
GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTG
CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTA
AAATTTTTTCGGAAGGATTTTGGCCCCAAACTTGGTAGACGTCATCCTGTATTTTTGTTGGCATG
CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGACC
CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCG
GTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCCTTGGCCCCCCCGATCACCGGAACCCCAATGCCACCGATCA
GGTTCTCCGCGATGCTCCGGCGATGGTGCCCCACGAAGAAAAATGCGGCACCAGCACATGCCCGA
GCCCAACATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGTGCTCAGCCG
GCCAGAGGGGCGAGATGCGCAAGCCAGGGATCGACCGAGTCCCCCTCTGC
Found at i:15950662 original size:26 final size:26
Alignment explanation
Indices: 15950633--15950682 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
15950623 GTCCGATCTT
*
15950633 AGACTGGGAATGAACTCCGTATGCTG
1 AGACTGAGAATGAACTCCGTATGCTG
*
15950659 AGACTGAGAATGAACTTCGTATGC
1 AGACTGAGAATGAACTCCGTATGC
15950683 CAAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.18, G:0.28, T:0.24
Consensus pattern (26 bp):
AGACTGAGAATGAACTCCGTATGCTG
Found at i:15952475 original size:26 final size:26
Alignment explanation
Indices: 15952446--15952498 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15952436 CCGGTCCGAT
*
15952446 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15952472 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15952498 C
1 C
15952499 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15954975 original size:26 final size:26
Alignment explanation
Indices: 15954946--15954996 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15954936 TGTTCAATCA
* *
15954946 TAGACTGGGAATGATCTCTGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
15954972 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
15954997 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.18, G:0.27, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:15955186 original size:4 final size:4
Alignment explanation
Indices: 15955177--15955202 Score: 52
Period size: 4 Copynumber: 6.5 Consensus size: 4
15955167 GACGAAACAA
15955177 GCGG GCGG GCGG GCGG GCGG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GC
15955203 ACTACGCCGG
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 22 1.00
ACGTcount: A:0.00, C:0.27, G:0.73, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:15955892 original size:26 final size:26
Alignment explanation
Indices: 15955853--15955905 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15955843 TCGGTTAGAT
*
15955853 CTTAGACTGAGAATAAACTCCGTATG
1 CTTAGACTGAGAATAAACTCCGCATG
* *
15955879 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGAGAATAAACTCCGCATG
15955905 C
1 C
15955906 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAGACTGAGAATAAACTCCGCATG
Found at i:15956551 original size:931 final size:890
Alignment explanation
Indices: 15953734--15958020 Score: 4466
Period size: 904 Copynumber: 4.7 Consensus size: 890
15953724 NNNNNNNNNN
* *
15953734 TTGTGACCATTTGGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACGTG
1 TTGTGACCATTT-GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
15953799 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA
65 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAA
* *
15953864 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGG-CCCCCCGATCG
130 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCCCCGATCG
* * *
15953928 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGA
195 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGA
* * * *
15953993 AAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAA-CC-C---TC-G----G-
260 AAAATGAGACACCAACACATG-CCGAGCCCAGCATGTGCTGACGTAACCCTCGATTCAGTCTAGA
* * * * *
15954047 TC-----C------G-A-TCCG-AT-CTTTGACTGGGAATAAACTCCGTATCCCTAAGTCATCCC
324 TCTTAGACTAGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATGCCTAAGTCAACCC
* * * * * ** * **
15954097 ACGAAATGACCGTGCGGGCGCTTAGCCGGCCAGAGGGGCAAGATGCGCAAGCC-AGGGATCGGCC
389 ATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGA-GGATC-GAT
* * * * * ** * * *
15954161 GGGTCCGCCTCTGTGTGCTGCCAATC-CTGCTGCCACAACCCTTAGTCCGGT-TCGATCTTACAC
452 GGGTCCCCCTCTGCGTGCTACCGATCTC-GCTACTGCAACCCTCAGTCTGGTCT-GATCTTAGAC
* ** * * * *
15954224 TAGGAATGAACTCCGTATGCCTAAGCCAACTAATGAAATGAGCGGGTGGGCGGGCGGGCACTACG
515 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-C----GAGCGGGCAGTCACTACG
*** *
15954289 TCGATTAGAGAAACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
572 TCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * * * *
15954354 TTCATCTTACTGCATGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
637 TTCATATTTCTGCGTGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * ** * *
15954419 TTCATGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTCGAAACTTTTTTC
702 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTAC
* * * * * * * * *
15954484 GGTTCGGGA-TTTTTTAAAATTTTTTTGGAAGGAGGTTTT-TCCCCAAACTTCGTAGACGTGATC
767 GGTTCGGGATTTTTTTAAAATTCTTTCGAAAAGA-GTTTTGACCCCAAACTTGGTACACATAATC
** * * *
15954547 ATTGTATTTTTTTTGGCATCTACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGA-T
831 CCTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * *
15954606 TT-TG------TGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTATTGGTAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15954664 AAAATCTCAAATGCTCTTTAAGGCGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
66 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAAT
* * *
15954729 ATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCAAACAACCCTCTCGG-CCCCCCGATC
131 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAC-ACCC-CCCGGCCCCCCCGATC
* ** * * **
15954793 GTCGGAACCCCAATGCCGCTTGTCAGGTTCTCCGATGATGCTCTGACGATGGTGCCCCGACGAAG
194 GCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAG
* * * * * *
15954858 AAAAAT-ACGGCACCAGCACATGCCCGAGCCCAGGATGTGTTGCCGCAACCCTGAAGAAAAATGC
259 AAAAATGA-GACACCAACACATG-CCGAGCCCAGCATGTGCTGACGTAACCC----------T-C
* * * * * *
15954922 GGCACCCTCGGTCCT-GTTCAATCATAGACTGGGAATGATCTCTGTATGCTTAGACTGGGAATGA
311 -G-A--TTCAGT-CTAG----ATCTTAGACT-AGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * ** * *
15954986 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGTGCTTAGTAGGCTAGAGGGGTGGG
366 ACTCCGCATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGG
* * * * * *
15955051 ATGCGCAAGCCGGGGATCAATCGGGTCCCCCTCTACGTGCTACCGATC-CTGCTGCTACAACCCT
431 ATGCACAAGCCGAGGATCGAT-GGGTCCCCCTCTGCGTGCTACCGATCTC-GCTACTGCAACCCT
* * * *
15955115 C-GATCCGGTCTGATCTTAGACCGGGAATGAACTTCGTATGCCTAAGCGAACCGACGAAACAAGC
494 CAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A-AA--
* * * *
15955179 GGGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
553 -----------CGAGCGGGCAGTCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
15955244 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGT
607 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCTATTTTTATGGC
* * * *
15955309 TTGTAAATTCATATAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGTAGGACGACTCGTTTT
672 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
** ** * * * * * * *
15955374 CTATTTTTCACGATTTTCAAAACTTTTTGCCGTTTGAGA-TTTGTTAAAATTTTTTC-AAAAGGC
737 CTATTTTTCATAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTCTTTCGAAAA-GA
* * * * * *
15955437 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAATATTCA
801 GTTTTGACCCCAAACTTGGTACACATAATCCCTGTATTTTTGTTGGCATCCACAAAAAA-ATTCA
*
15955501 GCTAAAAACTCGAACTGTACAAGATT
865 GCTAAAAACTCGAAGTGTACAAGATT
* * *
15955527 TTGGGACCATTTGAAAAGAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15955592 AAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
66 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAAT
* * *
15955657 ATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCACAAACCGCCCCTGGCCCCTCCGATC
131 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACACC-CCCC-GGCCCCCCCGATC
** * * * *
15955722 ATCGAAACCCCAACGCTGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAG
194 GCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAG
* * * * *
15955787 AAAAATGTGACACCAACACATGCGCAAGCCCAGCATGTGCTGTCGCAACCCTCGATTCGGT-TAG
259 AAAAATGAGACACCAACACATGC-CGAGCCCAGCATGTGCTGACGTAACCCTCGATTCAGTCTAG
*
15955851 ATCTTAGACTGAGAATAAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATGCCTAAGTCAAC
323 ATCTTAGACT-AGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATGCCTAAGTCAAC
* *
15955916 CCATGAAACGAGCTTGCGGGTGCTCAGCCGGCCAGAGGGGCAGGATGCACAAGCCGAGGATCTG-
387 CCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATC-GA
* * * *
15955980 TGTGCTCCCCTTTTGTGTGCTACCGATCTCGCTACTGCAACCCTCAGTCTGGTCTGA-CTTAGAC
451 TG-GGTCCCCCTCTGCGTGCTACCGATCTCGCTACTGCAACCCTCAGTCTGGTCTGATCTTAGAC
* *
15956044 TGGGAGTGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGTCACTACGTCGGCCAG
515 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGTCACTACGTCGGCCAG
* *
15956109 AGAGATGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
580 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
15956174 TCTGCGTGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGT-CCTTAAGCCTTCACGTG
645 TCTGCGTGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
*
15956238 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
710 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTCGGG
* * * * * * *
15956303 A-TTTTTTAAAATTGCTTT-GGAAGGAGTTTTGGCCGCAAACTTGGTAGACGTGATCCCTGTATT
775 ATTTTTTTAAAATT-CTTTCGAAAAGAGTTTTGACCCCAAACTTGGTACACATAATCCCTGTATT
15956366 TTTGTTGGCATGCACAAAAAAATTCAACTAAAACTCGAAGTGTACAAGATTTTGTGACCTTTTTT
839 TTTGTTGGCAT-C-C------A--C-A--AAAA----AA-T-T-C---A------G--C------
15956431 TGACTAAAACTCGAAGTGTACAAGATT
867 T-A--AAAACTCGAAGTGTACAAGATT
15956458 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15956523 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGCGGGCCAAT
66 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAAT
* * *
15956588 ATAAGGGCCTAGTACCAGCACCCATCGCACATCATGTG-ATTACACCCCCCGACCCCCCCGATCG
131 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCA-CACACCCCCCGGCCCCCCCGATCG
**
15956652 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGA
195 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGA
* * * * * * *
15956717 AAAATGCGGCATCAACACATGCCTGAGCCCAGCATGTGGTGCCGTAACCCTCGATCCAGTCCA-A
260 AAAATGAGACACCAACACATGCC-GAGCCCAGCATGTGCTGACGTAACCCTCGATTCAGTCTAGA
* * *
15956781 TATTAGACTACGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACC
324 TCTTAGACTA-GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATGCCTAAGTCAACC
* * * *
15956846 CATGAAACGAGCGTGCGGGTGCTCAACCGGCCAAAGGGGCGGGATGCACAAGCCGGGGATCGACC
388 CATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGA-T
* * ** *
15956911 GGGTCCCCCTCTGCGTGCTACCGATC-CTGCTACCGCAACCCTCTGTCCAGTCTGATCTTACACT
452 GGGTCCCCCTCTGCGTGCTACCGATCTC-GCTACTGCAACCCTCAGTCTGGTCTGATCTTAGACT
* * *
15956975 GGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGGCGGGCACT
516 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA------------GCGGGCAGTCACT
* * ** **
15957040 ACGTCGGCCAGAAAGAGGGGATGCGCAAGTTGTGGATCGATAGGGTGGTAGGTTTGTTTAGGCAC
569 ACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * * *
15957105 ATCTTCATATTTTTGTGTGCTAATGTTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
634 ATCTTCATATTTCTGCGTGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
*
15957170 GCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTT
699 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTT
** * *
15957235 TGTGGTTCGGGATTTTTTTCAAATTTTTTCGAAAAGAGTTTTGACCCCAAACTTGGTACACATAA
764 TACGGTTCGGGATTTTTTTAAAATTCTTTCGAAAAGAGTTTTGACCCCAAACTTGGTACACATAA
* *
15957300 TCCTTGTATTTTTTTTGGCATCCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
829 TCCCTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * *
15957362 TTGTGACCATTTGGAAAAAGTGTCCTCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15957427 AAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAAT
66 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAAT
* * *
15957492 ATAAGGGCCATGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTCGGCCCCCCCGATCGC
131 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCCCCGATCGC
*
15957557 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACG-TCGGTGCCCCAGTGAAGA
196 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGAT-GGTGCCCCGGTGAAGA
* *
15957621 AAAAT-ACAGCACCAACACATGCTCGAGCCCAGCATGTGCTGACGTAACCCTCGATTTAGTCT-G
260 AAAATGAGA-CACCAACACATGC-CGAGCCCAGCATGTGCTGACGTAACCCTCGATTCAGTCTAG
* * * * *
15957684 ATCTTAGGCTCATAATGAACTACGTATGCTTAGACTGAGAATGAACTCC-CTGTGCCTAAGTCAA
323 ATCTTAGACT-AGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGC-ATGCCTAAGTCAA
* * * * * * ** *
15957748 CCCACGAAACGAGCGTACTGGTCCTCAGCCGACCAGAGGGACGGGATGTGCAAGCCAAGGATCGA
386 CCCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGA
* * * *
15957813 CTGGGTCCCCCTCTGCATGCTGCCAATCTTGCTACTGCAACCCTCAGTCTGGTCTGATCTTAGAC
451 -TGGGTCCCCCTCTGCGTGCTACCGATCTCGCTACTGCAACCCTCAGTCTGGTCTGATCTTAGAC
*
15957878 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCAGGCCGGAGTGCAC
515 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A-AA-CGAGC--G--GG-C--AGT-CAC
* * * * *
15957943 TATGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGATTAGGCA
568 TACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
15958008 CATCTTCATATTT
633 CATCTTCATATTT
15958021 TTGGGTGCTC
Statistics
Matches: 2910, Mismatches: 331, Indels: 316
0.82 0.09 0.09
Matches are distributed among these distances:
864 151 0.05
865 5 0.00
866 112 0.04
867 2 0.00
871 2 0.00
872 2 0.00
879 1 0.00
886 2 0.00
887 1 0.00
891 134 0.05
892 133 0.05
893 1 0.00
896 4 0.00
898 1 0.00
899 1 0.00
900 2 0.00
901 2 0.00
903 3 0.00
904 578 0.20
905 8 0.00
906 3 0.00
907 3 0.00
908 42 0.01
909 155 0.05
910 6 0.00
911 4 0.00
912 165 0.06
913 5 0.00
914 7 0.00
915 1 0.00
916 1 0.00
917 1 0.00
918 1 0.00
919 13 0.00
920 285 0.10
921 4 0.00
922 2 0.00
924 3 0.00
925 1 0.00
926 1 0.00
927 7 0.00
928 163 0.06
929 383 0.13
930 51 0.02
931 190 0.07
933 1 0.00
934 1 0.00
936 1 0.00
942 124 0.04
943 83 0.03
944 58 0.02
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (890 bp):
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAAT
ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCCCCGATCGC
CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAA
AAATGAGACACCAACACATGCCGAGCCCAGCATGTGCTGACGTAACCCTCGATTCAGTCTAGATC
TTAGACTAGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATGCCTAAGTCAACCCAT
GAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATGGGT
CCCCCTCTGCGTGCTACCGATCTCGCTACTGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAA
TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGTCACTACGTCGGCCAGAGAGAC
GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCG
TGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
CATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTCGGGATTTTT
TTAAAATTCTTTCGAAAAGAGTTTTGACCCCAAACTTGGTACACATAATCCCTGTATTTTTGTTG
GCATCCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
Found at i:15956821 original size:26 final size:26
Alignment explanation
Indices: 15956783--15956834 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
15956773 CAGTCCAATA
15956783 TTAGACTACGAATGAACTCCGTATGC
1 TTAGACTACGAATGAACTCCGTATGC
** *
15956809 TTAGACTGGGAATGAACTTCGTATGC
1 TTAGACTACGAATGAACTCCGTATGC
15956835 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29
Consensus pattern (26 bp):
TTAGACTACGAATGAACTCCGTATGC
Found at i:15958871 original size:26 final size:26
Alignment explanation
Indices: 15958835--15958887 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15958825 CTGGTCCAAT
* *
15958835 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCATATG
*
15958861 CTTAGATTGGGAATCAACTCCATATG
1 CTTAGACTGGGAATCAACTCCATATG
15958887 C
1 C
15958888 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCATATG
Found at i:15959999 original size:893 final size:888
Alignment explanation
Indices: 15958023--15982615 Score: 12285
Period size: 893 Copynumber: 27.2 Consensus size: 888
15958013 TCATATTTTT
* * * * * * * *
15958023 GGGTGCTCAGCCGGCCAGAGGGGTGGCATGCGTAGGCCGGGGATGGGTCGGGTCTCCCTCTTCGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * *
15958088 GCTGCCGATCCTGCTGCTGCAACCCTCAG-TCTGGTCTAATCTTAGACTGGGAATAAACTCCATA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
15958152 TACCTAAGCCAACTGACGAAAC-GA-----GCGGGC---GGGCACTACGCAGGCCAGAGAGACGG
131 TGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGG
* * * * *
15958208 GATGCGCAAGTCGTAGATCGATAGGGTGGTAGGTGGGTTTACGTACATCTTCATATTTCCGCATG
196 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
15958273 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
261 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* *
15958338 TGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCAGGATTTTTTA
326 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* * *
15958403 AAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGTA
391 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* *
15958468 TGCACAAAAAAATTCAGCCAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGT
456 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
*
15958533 CCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAAATCTCAAATGCTCTTTAAG
521 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT-AAAATCTCAAATGCTCTTTAAG
* * ** *
15958598 GGGGTGTGAGTTCTCGAGGTTTTATGACTGAT-GGGGGGCAATATAAGGGCCAAGTACC-GACAC
585 GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG-CAC
* * ** *
15958661 CCATCGCACATCATGTGCGCACACCACCTCAG-CCCCCTCGATCACCGGAACCCCAATG-TCGTC
649 CCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCCT-GATCGTCGGAACCCCAATGCT-GCC
** *
15958724 GGTCAGGTTCTCCGGCTATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAACACA
711 GGTCAGGTTCT---GC--TG----G-CGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACA
* ** * *
15958789 TGCCCGAG-CCTGCCATGTGCTGTCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAAC
765 TGCCCGAGCCCAG-CATGTGCTACCGCAACCCTCGG-C-GGTCCGATCTTAGACTGGGAATGAAC
* * * *
15958853 TCCGTATGCTTAGATTGGGAATCAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGC
827 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * *
15958915 GGGTGCTCAGCCGACCAGAGGGCCAGGATGTGCAAGCCGGGGATCAGCTGGGTCCCCCTCTGCGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * *
15958980 GCTGCCAATCCTGCTACCGCAACCCTC-GATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
** * * * *
15959044 TGCCTAAGCCAACCGATAAAACAAGCGGGCGGGCGGGCCGGAGGGCACTACACCGACCAGAGAGA
131 TGCCTAAGCCAACCGACGAAAC-AG-AGGCGGGCGGG-CGGGGGGCACTACGCCGGCCAGAGAGA
* *
15959109 CGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGATTAGGCACATCTTCATATTTCTGC
193 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
15959174 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
258 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * ** ** * *
15959239 TCATGGCAAGATGACTCGTTTTCTATTTTTGATAATTTTTGAAACTTTTTGTGATTTGGGATTTT
323 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA-TTT
*
15959304 TTTAAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
387 TTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
*
15959369 TGGCATGCACAAAAAAATTCAGCCAAAAACTC-AGAGTGTACAAGATTTTGTGACCATTTGAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGA-AGTGTACAAGATTTTGTGACCATTTGAAAA
*
15959433 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCT
515 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
15959498 TTAAGGGGGTGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCA
580 TTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * *
15959563 GCACCCATCACATATCATGTGTGCACACCCCCCGGCCCCCCTGATCAG-CGGAACCCCAACGCTG
645 GCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATC-GTCGGAACCCCAATGCTG
* * * ** ** * *
15959627 CCAGTCAGATTCT-CTGGCGATGGTGCCTCAATAACCAAAATGCGGCACCAACACTTGGCCGAGC
709 CCGGTCAGGTTCTGCTGGCGATGGTGCCCCACGAAGAAAAATGCGGCACCAACACATGCCCGAGC
15959691 CCAGCATGTGCTACCGCAACCCTCGGTTCGGTCCGATCTT-GTACTGGGAATGAACTCCGTATGC
774 CCAGCATGTGCTACCGCAACCCTCGG--CGGTCCGATCTTAG-ACTGGGAATGAACTCCGTATGC
* * ** *
15959755 TTAGACTGGGAATGAACTCCATATGCCTAAGTGAACCCATAAAATGAGCGTGC
836 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * *** *
15959808 GGGTGCTCAGTCGGCCAGAGGGGCGGGACGCACAAGCCGGGGATCAGCCGGGTCCTATTCTACGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * *
15959873 GCTGTCGATCCTACTGCTGCAACCCTCAGTTC-AGTCTGATCTTAGACTAGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
15959937 TACCTAAGCCAACCAACGAAACGAGCAGGCGGGCGGGCGGGTGGGTACTACGTCGGCCAGAGAGA
131 TGCCTAAGCCAACCGACGAAAC-AG-AGGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGA
* *
15960002 CGGGATGCGCATGCCGTAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
193 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * *
15960067 ATGCCAATGCCAATTTTATCGCTTGTAAATTCATACAATGGTCCCTTCAGCCTTCACGTGAAGTT
258 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * *
15960132 TCATGGCAAGACGACTCGTTTTCTATATTTCATGATTTTCGAAACTTTTTACGGATCGGGATGTT
323 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* *
15960197 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCATTGTATTTTTGTTG
388 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
15960262 GCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
453 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
*
15960326 TGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTA
518 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
15960391 AGGGGGTGTCAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCA
583 AGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * ** * *
15960456 CCCATCGCACATCATGAGTGCACACCCCCCCTGG-CCCCCTCGATCACCGGAACCCTAATG-TCA
648 CCCATCGCACATCATGTGCGCACA-CCCCCC-GGCCCCCCT-GATCGTCGGAACCCCAATGCT-G
* *
15960519 CCGGTCAGGTTCT-CCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAG
709 CCGGTCAGGTTCTGCTGGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACATGCCCGAG
* ** *
15960583 CCCAGCATGTGCTACCACAACCCTCGGTCCGGTTTGATCTTAGACTGGGAATGAACTCCATATGC
773 CCCAGCATGTGCTACCGCAACCCTCGG--CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
* * * *
15960648 TTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCTCGAAACGAGCATAC
836 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* ** * * ** * * *
15960701 -TGTGGCTCAGTTGGCCAGAGCGGCGGGATGTGCAAGCCAAGGATCGACCGAGTCCCCATCTGCG
1 GGGT-GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCG
* * * * *
15960765 TGGTGCTGATCCTGGTGCTGCAACCCTC-GGTCTGGTCTGATCTTAGACTGGTAATGAACTCCGT
65 TGCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
15960829 ATGCCTAAGCCAACCAACGAAACAAACGGGTGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAG
130 ATGCCTAAGCCAACCGACGAAACAGA--GGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAG
* * * * * *
15960894 ACGGAATGCGCAAGCTGTGGAGCGATAGAGTGGTAAGTGGGTTTAGGCACGTCTTCATATTTCTG
192 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*** * * *
15960959 TGCGCCAATGCCATTTTAATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCGTTCACGTGAAGT
257 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
** * * **
15961024 TTCATGGTGAGATGA-TGCGTTTTCTATTTTTCTCGATTTTTGAAACTTTTTACGGTTCAAGATT
322 TTCATGGCAAGACGACT-CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
* *
15961088 TTTTAAAATTTTTTCGAAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
386 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * * *
15961153 TGGCATGCAGAAAAAAATTCAGCTACAAATTCGAAGTGTACAAGA-TTTGTGGCCATTTGAAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * *
15961217 AGTGTCCCCATTTCCA-ACACTTTAATGGCTACTGACACCAAACCTGTAAAATCTCAATTGCTCT
516 AGTGTCCCCATTT-CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* * *
15961281 TTAAGCGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCA
580 TTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * * * * *
15961346 GCACCCATCGCACATCAAGTGCGCACACCCCCCCGACCCCCTTGATCGTTGGAACCTCAAAGCCG
645 GCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTG
* *
15961411 TCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAAT-CTGGCACCAAC
709 CCGGTCAGG-T-TCT-GC--TG----G-CGATGGTGCCC-CACGAAGAAAAATGC-GGCACCAAC
** **
15961475 ACATGCCCGAGCCCAGCATGTGCTGTCATAA--C-C--C--T-CGA---T---CT-GG--T---C
762 ACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATGAAC
*
15961520 T--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGC
827 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * *
15961578 AGGTGCTCAGTCGGCCAGAGGGGTGGGATGCACAAACCGGGGATCGGTCGGGTCCCCCTCTGGGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
** * * * * * ** * *
15961643 GCTATCAATCCCGCTTCCGCAACCCTC-GGTCTGGTCCAATCTTAGACTGGGAATGAACTGCATA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
15961707 TGCCTAAGCCAACCGATGAAA-TGA-GCGGGCAGGC---GGGCGCTACGTCGGCCAGAGAGATGG
131 TGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGG
* *
15961767 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTTTGCATG
196 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
15961832 CCAATGCCATTTTTATGGCTTGTAAA-TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
261 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* *
15961896 TGGCAAGAGGACTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
326 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
*
15961961 AAATTTTTTCGGAGGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GCT
391 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC-
* *
15962025 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGCACAAGATTTTGCGACCATTTGAAAAAAGTG
455 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * *
15962090 TCCCCATTTCAGACACTTTAATGGCTACTGGTAACAAACCTATAAAATCTCAAATGCTCTTTAAG
520 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * *
15962155 GGGGTGTGAGTTCTCGAGCTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
585 GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * *
15962220 CATTGCACATCATGTGCGCACA-----C--CCCCCC-GATCGCCGGAACCCTAATGCCGCCGGTC
650 CATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCCGGTC
* * *
15962277 AGGTTTTCTGGCAATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACTTGCC
715 AGG---T-T--C--TGCT--GGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACATGCC
* * *
15962342 TGAGCCCGGCATGTGC-AGCCGTAACCCT---C-G---G----T---CT-GG--T---CT--G-A
769 CGAGCCCAGCATGTGCTA-CCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
15962383 T-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCGCAAAATGAGCATGC
833 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * * *
15962438 GAGTGTTCAGCTGGCCAAAGTGGCGGGATGCGCAAGCCTGGGATTGGTCGGGTCCCCCTCTGCGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * *
15962503 GCT---G----T-C-G-T--AACCCTCAGTTC-GGTCTAATCTTAGACTGAGAATTAACTCCATA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
15962555 TGCCTAAGCCAATCGAC-AGAACGAGCGGCCGGGCGGGCAGGCGGGCACTACGCCGACTC-GAGA
131 TGCCTAAGCCAACCGACGA-AAC-AGAGG-CGGGCGGGC-GGGGGGCACTACGCCGGC-CAGAGA
* *
15962618 GACGGGATGCGCAAGCCGTAGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCT
191 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
**
15962683 GTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
256 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* ** *
15962748 TTTCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTCAGGA-T
321 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
** * * * * *
15962812 TTTTAAAAAATTTTCAGAAGGATTTTTAGCCCCAAACTTGGTAGACGTGATCCATGTATTTTTTT
386 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * * *
15962877 TGGCGTGCACAAAAAATTTAATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
*
15962942 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * *
15963007 TAAGGGGGAGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAAGTACCAG
581 TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * *
15963072 CACCAATCGCACATCATGTGTGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCGGCC
646 CACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCC
* * *
15963137 GGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCAGTGAAGAAAAATGCGGCACCAGCACA
711 GGTCAGG-T-T-C-----TGCT--GGCGATGGTGCCCCA-CGAAGAAAAATGCGGCACCAACACA
** * * ** * * *
15963202 TGCTTGAGCCTAGCATGTGCTGCCTTAACCCTCGGTCCGGTCTGATCTTAGAATGGGAATGAAAT
765 TGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGG--CGGTCCGATCTTAGACTGGGAATGAACT
**
15963267 CCGTATGCTTAGACTGGGAATGAACTTTGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
828 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
*** * * ** * * *
15963328 GAACGCTCAGCCGGCCGGAGGGGCGGGATGCACAAGCCAAGGATCGACCGGGTCACCCTCTGTGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * *
15963393 GCTACCGATCCTACTG-TCGAAACCCTCAGTT-TGGT-TCGATCTTAGACTGGGAATGAACTCCG
66 GCTGCCGATCCTGCTGCT-GCAACCCTCAGTTCTGGTCT-GATCTTAGACTGGGAATGAACTCCG
* *
15963455 TATGCCTAAGCCAACCGACGAAACA-A-GCGGACGGGC---GGGCACTACGCCGGCTAGAGAGAC
129 TATGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGAC
* * * * * *
15963515 GGCATGCACAAGCCGTGTATCGTTAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTTTGCA
194 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* * *
15963580 TGCCAATGCCATTTTTATAGCTTGTAAATTCATACAATGGACCCTTAAACCTTCACGTGAAGTTT
259 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * *** * * **
15963645 CATGGCAAGACGACTCATTTTTGTATTTTTCACAATTTCCAAAACTTTTTGCAGTTCAAGATTTT
324 CATGGCAAGACGACTC-GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* *
15963710 TTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTG
388 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * * *
15963775 GCATGCGCAAAAAAATTCAGCTAAAAGCTTGAAGTGTACAAGATTTTGTGACCTTTTAAAAAAAG
453 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
15963840 TGTCCCTATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTGAAATGCTCTTTA
518 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
15963905 AGGGGGTGTGAGTTATTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCGGCA
583 AGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * ** *
15963970 CCCATCGCACATCATGTGCGCACACCCCCTCGACCCCCCTGATCGTCGAAATCCCAATGCCACTG
648 CCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCTGATCGTCGGAACCCCAATGCTGCCG
* ** * *
15964035 GTCAGGTTCTCCGGCGATGCTCCGGTGATGGTGCCCCGTGAAGAAAAATGTGGCACCATCACATG
712 GTCAGG-T-T----C--TGCT--GGCGATGGTGCCCCACGAAGAAAAATGCGGCACCAACACATG
* * * * *
15964100 CCCAAGCCCACCATGTCCTATCGTAACCCT---C-G---G----T---CT--G---G---TCCG-
767 CCCGAGCCCAGCATGTGCTACCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * *
15964142 AT-CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGTGTAC
832 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * *
15964198 GGGCGCTCAGCCGGCCAGAGGCGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * ** * *
15964263 GCTGCCGATCTTGCTGCTGCAACCCGCAG-TCCGGTCCAATTTTGGACTGGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
15964327 TGCCTAAGCCAACCGAC-AAA-ATGA-GCGGGCAGGCGGGTGGGCACCACGTCGGCCAGAGAGAC
131 TGCCTAAGCCAACCGACGAAACA-GAGGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGAC
* ** * * **
15964389 GGGATGCACAAATCGTGGATCGATAGGCTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGTG
194 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* * *
15964454 TGCCAATGCCATTTTTATGCCTTGTAAATTCAAACAATGGTCCCTTTAGCCTTCACGTGAAGTTT
259 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
** ** * *
15964519 CATGGCAAGACGACTCAATTTCTATTTTTCACGATTTTCAAAACTTTTTACGATCCGGGATTTTT
324 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
* * **
15964584 TAAAATTTTTTGGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTCA
389 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * *
15964649 CATGCACAAAAAAATGCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGT
454 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
15964714 GTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACTTGTAAAATCTCAAATGCTCTTTAA
519 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
15964779 GGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCGAGTACCAGCAC
584 GGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * * **
15964844 CCATCGCAAATCATGTGCTCTCAACCCCCCGGCACCCC-GATCGCCGGAACCCCAATGCCACCGG
649 CCATCGCACATCATGTGCGCAC-ACCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCCGG
* * * * * * * * *
15964908 TTAGGTTCT-CCGACGATGGTACCCCGACGAAGAAAAATACGACACCAACACATTCCCCAGCCTA
713 TCAGGTTCTGCTGGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCA
* *
15964972 GCATGTGCTGCCGCAA-------C---CC--TC--AGTCT--G---G---TCCG-AT-CTTAGAC
777 GCATGTGCTACCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* ** *
15965013 TGGGAATGAACTCTGTATATCTAAGTCAACCCACGAAACGAGTGTGC
842 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * ** * * *
15965060 GGGTGCTCAGCCGACAAGAGGGGCGGGATGCGCAAGCCGATGATTGGCAGGGTCCGCCTCTGCGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * *
15965125 GCTGCTGATCCTGCTGCCGCAGCCGTCAG-TCTGGTCTGATCTTAGACT-GGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
15965188 TGCCGAAGCCAACCGATGAAATGAGTGGACGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGA
131 TGCCTAAGCCAACCGACGAAA-CAGAGG-CGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGA
* * *
15965253 CGGGATGCGTAAGCCATGGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
193 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * *
15965318 GTGCCAATGCCATTTTTATGGCTTGTAAATTAATACAATGGTCCCTTAAGCCGTCACGTGAAGTT
258 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * *
15965383 TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTGTTGCGGTTTGGGATTTT
323 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * * *
15965448 TTAAAATATTTTCGGAAGGAGTTTTGTCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTCTTG
388 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
15965513 GCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAG
453 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
15965578 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
518 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * *
15965643 AGGGGGTGTGAGTTCTTGAGGTTTGGTGAGGGATAGAGGGCCAATATAAGGGCCAAGTATCAGCA
583 AGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * * * ***
15965708 GCCATCG-ACGTCATGTGCGCTCACCCCCCCGGCTCCCCTGATCGCCAGAACTTTAATG-TCGCC
648 CCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCT-GCC
* * * *
15965771 GGTCAAGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACT
711 GGTCAGGTTCT--G-C--TG----G-CGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACA
* * * * * * *
15965836 TGCCCGAGCCCAGCATGTGCTACCGTAATCCTTCGTCCAGTCCG-T-AT-GCCT---AAGTCAAC
765 TGCCCGAGCCCAGCATGTGCTACCGCAA-CCCTCG-GCGGTCCGATCTTAGACTGGGAA-TGAAC
* * * * * * * * *
15965895 -CC--A--C---GA-----AACGAGCGTGCG---GGC--ACTCAACCGAC--CA-GAGGGTGA
827 TCCGTATGCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* *** **** ** * ** * * *
15965937 GATGTGCAAGTCAG--GGATTG-GTTGGGTCCCCCT-CTGCGTGCTGCCGATCCTGCTAC-CGTA
1 G-GGTGC---TCAGCCGGCCAGAG--GGG-CGGGATGC-GCAAGCCGGGGAT-CGGC--CGGGTC
* * * * * * * * * *
15965997 ACCCT-T-TGT-CTAGTCCGATCTTAGACTGGGAATG-AA--CTCCG-TAT-GCCTAAGC-CA-A
55 CCCCTCTGCGTGCT-G-CCGATCCT-G-CT--G-CTGCAACCCTCAGTTCTGGTCTGATCTTAGA
* * * * * * * * * * ** * * * * * *
15966052 CTGACGAAACGAGCT-GGT-GGGC--GGGCGAGCG--GCCAC-TATGC---CGGCCAGAGAG-A-
113 CTG--GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCGGGGGGCAC
*** ** * * * * ****
15966105 TA-GGATGCGCA-AGCCA-TGGAT-CG-ATAG-GGTGG-T-AAGT-GGGT-TTAGGCACATGTT-
176 TACGCCGGC-CAGAGAGACGGGATGCGCA-AGCCGTGGATCGA-TAGGGTGGTAGGTGGGT-TTA
* * ** **** * ** ** *
15966159 --CATATATCTC-TATACCAATGCCATTTTTATGGC-TTGTAAAT---TCATACAATGGTCCCT-
237 GGCACATCT-TCATATTTC--TG-CATGCCAATGCCATT-TTTATGGCTTGTA-AAT--T-CATA
* * * * * *
15966216 TAA-GCCTTCACGTGAAG-TTTCA--T---G-------GCAAGACGACTCGTTGTCTATTTTTCA
293 CAATG--GTC-CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* ** * * *
15966267 CGATTTTTGAAACTTTTTATGGTTCAAGATTTTTTAAAATTTTTTTGAAAAGAGTTTTGGCCCCA
355 CGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* * * * *
15966332 AACCTGGTAGACGTGATTCTTGTATTTTTGTTGGTATGCACAAAAACATTCAGTTAAAAACTCGA
420 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* * *
15966397 AATGTACAAGGTTTTGTGACGATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
485 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
*
15966462 GCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGG
550 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGG
* *
15966527 ATAGGGGGCCAATATAAGGGCCAAGTACTAGCGCCCATCGCACATCATGTGCGCACACCCCCTCG
615 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CG
* * * * * *
15966592 ACCCCCCTGATCGCCGGAACCCTAACGCCGCCGGTCGGGTTCTTCGGTGATGCTTCGGCGATGGT
679 GCCCCCCTGATCGTCGGAACCCCAATGCTGCCGGTCAGG---TTC-----TGC-T-GGCGATGGT
* *** * * * * *
15966657 GCCCCGACGAAGAGAAATGTTACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAAACCTC
734 GCCCC-ACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTC
* * * * * *
15966722 AGTCCTGTCCGATCTTAGACTGGGAATGAACTTCGTATGGTTAGACTGGGAATGATC-CCAT-TG
798 -G-GCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * *** * *
15966785 CACATCATGTTCGCACACCCCCCCCGCGGTCGCAACCCTCGATC
861 C-C-T-AAG-T--CA-A---CCCACG-AAACG--AGCGT-G--C
* * * ** *** * * ** * *
15966829 TGGTCCAATCTTAGACTGGGAATGA-ACTCCGTATGC-CTAAGCTAACTGATAAAACGAGCGGGC
1 GGGTGC--TC--AG-CCGGCCA-GAGGGGCGGGATGCGC-AAGC---C-G-----GGGATCGGCC
* * * * * * ** * * * * *
15966892 GGGTGGACGGGCGGGCACTATCCCG-GCCAG-AGAGACGGGATGC-GCAAGCCGT-GGATC-GAT
50 GGGT---C---C---CCCTCT-GCGTG-CTGCCGA-TCCTGCTGCTGCAA-CCCTCAGTTCTGGT
** * ** * * * * * ** * * * ******
15966952 AGGGTGGTAG-GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA-TG-CCATTTTTTTGGC
102 CTGATCTTAGACTGGG--AATG-A-A-CTCCGTATGCCT--AAGCCAACCGACGA-AACAGAGGC
** *** *** * * * ** * ** *** * * *
15967014 TTGTAAATTCATACAATGGTCCCTTAAGCC-TTCACGTGCTATCGATCCCTGCCGTAA-CCCTCG
159 --G----GGCGGGCGGGGGGCAC-TACGCCGGCCA-GAGAGA-CG--GGATG-CGCAAGCCGTGG
* * * ** * ** * * *
15967077 TTCTGGTCGGGTCCCCCTCTACGTGCAGGAGATCGATCGGGTCCCCCTCTACGTGC-TATCGATC
212 ATC-GATAGGGT-----GGTA-G-G-TGG-G-T---TTAGG--CACATCT---T-CATAT--TTC
* * ** * * ** * ** * * *
15967141 TTGC-TACCGTAA--CCCTCGTTCTGGTTTG-ATCTT-AGACTGGGAATGAACTTCGTACGCCTA
255 -TGCATGCC--AATGCCATTTTTATGGCTTGTAAATTCATAC----AATGGTC-CCTTAAGCCT-
* * * ** * * ** **** * ***
15967201 AGCCAAC-CGACG--AAACGAGCGAG-CGGGCAGGCGGGCACTACGTCGGC-CAGA-----GAAA
311 --TC-ACGTGAAGTTTCATG-GCAAGAC--G-ACTCGTTTTCTA-TTTTTCAC-GATTTTTGAAA
**** * * * * *** ** * * * * * **
15967256 CGGGATGCGCAAG-CCGTGGA---TTGATAGGGTGCTAGG-TGG-GTTTAGG-CAC-ATCTTCAT
367 CTTTTTACG---GTTCG-GGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
*** * * * * * * * * * **
15967313 ATTTTTGAGAGCCAATGCCATTTTT-ATGGC-T-TATAAATTCATACAATGGTC-CCTTAAGCCT
428 A--GACGTGATCC-TTG-TATTTTTGTTGGCATGCACAAA---A-A-AAT--TCAGCTAAAAAC-
* * **** ** * *** *
15967374 TC-ACGTG---AAG-TTTCATGGCAAGACCACTCATT-TTCTATTTTTCATGATTTTCA-AAACT
481 TCGAAGTGTACAAGATTT--T-G--TGACCA-T--TTGAAAAAAGTGTCCCCA-TTTCAGACACT
* * * * *** * * * * * * ***
15967432 TT--TTGC-AGT-TCAG-GATTTTTTAAAATTTTTTAGGAAGGATTTTTGGCCCAAAACTTGGTA
537 TTAATGGCTACTGGCAGCAAACCTGTAAAA--TCTCA--AATGCTCTTT-------AAGGGGGT-
* ** ** ** * ****** * *** * *
15967492 GACATGA-TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACA
590 G---TGAGTTCTTG-AGGTTTGAT-G-A-G-GGATAGGGGGCCAA-TATAAGGGCCAA--GTACC
* * * ** * * ***** ** *
15967556 AG-ATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGCCAGCA
644 AGCA-------CCCA-TCGCACATCA-TGTGCGC-------ACAC-CCCCCGGC--CCCCCTG--
* * *** * * ** ** * ** ***
15967619 AACCTATAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCT-CAAGGTTTAATGAG-G-GATA
688 ATCGT-CGGAA-CCCCAATG--C--T--GCCGGTCAG-GTTCTGC-TGG--CGATG-GTGCCCCA
* ** * * ** * * ** * *
15967681 GGGGGCCAATATAAGG-GCCAACTACCA-GCACCCATTGTACATCATGTG----CGCACACCCCC
740 CGAAG-AAAAATGCGGCACCAAC-A-CATGC-CCGA--GCCCAGCATGTGCTACCGCA-ACCCTC
** ** *** * ** * ** *
15967740 TGGCCCTCCCGATCGTCGGAAC-CCCAATG--CTGCCGGTCA-GATT-CTCTGACG-ATGGTGCC
798 -GGCGGT-CCGATC-TTAG-ACTGGGAATGAACT-CC-GT-ATGCTTAGACTG-GGAAT-GAACT
* *** * * * *
15967799 CCGGTGAAGAAAAAGGTGGCACCAGCACATGCCTGAACCCAGCATG-
854 CC-GT-ATGCCTAA-GT--CA--A-CCCA---C-GAAACGAGCGTGC
* * ** *** ** ** * **
15967845 TGCTGC-C-G-CAACCCTTGGTCCGGTCCGAT-C-TTAGACTGGGAATGAACTCCGTATGCCTAA
1 GGGTGCTCAGCCGGCCAGAGGGGCGG---GATGCGCAAG-CCGGG---G-A-T-CG---GCC-GG
* ** * * * * * ** ** * *
15967905 GTCAACTCACGAAATGAGCGTGCGGGCGCTCAGCAGGCCAGAGGGGCAGGATGCGCAAG-TCGGG
52 GTC--C-C-C---CTCTGCGTGCTGCCGATC--C-TG-C--TGCTGCA--ACCCTC-AGTTC-TG
* ** ** * ** ** *
15967969 GATC-GACCGGGTCT-CCCTCTGCATG--CTGCCGATCATG-CT--GTCACAACCCTCG-GTCTG
100 G-TCTGATC---T-TAGACTGGGAATGAACT-CCG-T-ATGCCTAAG-C-CAACCGACGAAACAG
* ** * ** * * ***** * ** * * *
15968026 -GTCCGATCTTGGACTGGGAATGAACTCCATATACCTAAGAAAACTGACGACATGAGCGAGCGGG
155 AG-GCGGGC--GGGC-GGG-GGGCACTACGCCGGCC--AG-AGA--GACGGGATGCGCAAGC-CG
* * * * * * *
15968090 CGGACGGGCGGA-AGGGCACCTCGCCGGCCAGAGTGACGG--GATGCGAAAGCCGTGGATCGATA
209 TGGA---TC-GATAGGG----T----GG-TAG-GTG--GGTTTAGGC-ACA-TC-T---TC-ATA
** ** * * * * * ** * ***
15968152 GGGTGGTAGGTGGGTTTAGGCACAT-CTTCATATTTCT-ACGTGCCAATGCCATTTTTATGG--C
251 ---T--T---TCTGCAT-GCCA-ATGC--CATTTTTATGGCTTGTAAAT-TCA-TACAATGGTCC
* * * * * *
15968213 TTATAAATTCATACAATGGTCCCCT-AAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCGTTT
302 CT-T-AA-GC---C--T--TCACGTGAAG--TT---T--------CATGGCAAGACGACTCGTTT
* *
15968277 TCTATTTTTCACGATTTTCGAAACTTTTTGA-GGTTCGGGA-TTTTTAAAATTTTTTCGAAAGGA
344 TCTATTTTTCACGATTTTTGAAACTTTTT-ACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* *
15968340 TTTTTGTCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
408 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* *
15968405 CTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTT
473 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
15968470 TAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
538 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAG
* *
15968535 GTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGCACATCATGTGCG
603 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * * * *
15968600 CACACCCCCCCGCCCCTCCCGATCGCCGGAACCCCAATGCCGCTGGTCAGTTTCTCCGGCGATGC
668 CACACCCCCCGGCCCC-CCTGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCT---GC--TG-
* * * * * *
15968665 TCCAGTGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCACGAGCCCAGTATGTGCT
726 ----GCGATGGTGCC-CCACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT
* * * *** * *
15968730 ACCACAACCCTCGATCCGATCCGATCTTAGACTACAAATGAAGTACGTATGCTTAGACTGGGAAT
786 ACCGCAACCCTCG--GCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
*
15968795 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGC
849 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * ** * *
15968835 GGGTGCTTAGCCAGCCAGAGGGGTGGGATGCGTAAATCGGGGATCGGTCGGGTCCCCCTCTACGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* ***
15968900 GCTGCCGATCTTGCTGCCATAACCCTCAGTT-TGGTCTGATCTTAGACTGGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
15968964 TGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGAGGGCGGGCACTACGTCGGCCAGAGAGA
131 TGCCTAAGCCAACCGACGAAAC-AGAG-GCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGA
**
15969029 TAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-
193 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
15969093 AGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
258 A-TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* **
15969158 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTT
322 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA-TT
* *
15969223 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAAACTTGGTGGACGTGATCCTTGTATTTTTGT
386 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* *
15969288 TGGCACGCACAAAGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * * *
15969353 GGTGTGCCGATTTCAGACACTTTAATGGCTACTGGCCGCAAACCTGTAAAATCTCAAATGCTCTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * *
15969418 TAA-GGGGTGGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAGTATAAGGGCCAAGTACCA
581 TAAGGGGGT-GTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * * *
15969482 GCACCCATCGCACATCATGTGTGCACACCCTCCTGGCCCCCCCGATCGTCCGAACCCTAATGCTG
645 GCACCCATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCTGATCGTCGGAACCCCAATGCTG
* * * *
15969547 TCGATCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
709 CCGGTCAGG-T-T-C-----TGCT--GGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACA
* * * *
15969612 CATGCCCGAGCCCTGCATGTGCTGCCGCAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAA
763 CATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGG-C-GGTCCGATCTTAGACTGGGAATGAA
* * *
15969677 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACTCGCGAAACGAGCGTGC
826 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * **
15969740 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGAGCAAGCCAGGGATCGACTGGGTCACCCTCTGTAT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * * * * ** *
15969805 GCTGTCGATCCTACT-ATCACAACCCTCTGTT-TGGTCTGATATTAGACTCTGAATGAACTTCGT
66 GCTGCCGATCCTGCTGCT-GCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* **** * * *****
15969868 ATGCATAAGCCAACCGACGAAACA-A-GCGGGCGGGCATGATCCTTGTATTTTTTTTGG-CATGC
130 ATGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGC--G--GGGGGCA-CTACGCCGGCCA-G-
* *** * *** * *** * *
15969930 ACAGA-AAAATTCAGCTAA---AAAG-TC-A-A-AGT-GTA-CAAGATTTTGTG-ACCAT-TTGA
188 AGAGACGGGATGC-GC-AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG-GCA-CATCTT--
* * * ** ** * * * * * * *
15969983 AAAAAGTGTCCCCATTTC-A-GACACTTTAATGGC---T-ACTGGCAGA-AA----ACCTGTAA-
247 -CATA-TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT-TCATACAATGGTCCCT-TAAG
** ** *** * * *** * * * * **** *
15970036 AATCTCAAATGCTCTTTAAGGGGGTG-CGA---GTTCTCGAGGTTTGATAAGCGATAGGGGGCCA
308 CCT-TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA--TTT-TTCA-CGAT-TTTTG-AA
* * * * * *** ** * * * ** ******* * *
15970097 A--TATAAGGGCTAAGTACCAGCACCCATTGCACATCATGTTCACACA-CCCCCCCGACCCCCCG
366 ACTTTTTACGG-T---T--CGGGA-TTTTTTAAAAT-TTTTTCGGA-AGGAGTTTTG--GCCCCA
* * * * * ** * * ** * * ** ** **
15970159 ATCGTCG-AAACCCCAATG-TCACCGGTCAGGTTCT-CCGACGATGCTC-CGACGATGGTGCCCC
420 AACTTGGTAGA---C-GTGATC-CTTGT-A-TTTTTGTTGGC-ATGCACAAAAAAAT--T-CAGC
**** * * ** * ** * * *** *
15970220 GGGTAGCAC--A-TGCCCGAGCCCAGCTTGTG--C-TGCTG-CAACCCTCGGT-CCGATCTGATC
474 TAAAAACTCGAAGTGTACAAG---ATTTTGTGACCAT-TTGAAAAAAGT--GTCCCCAT-T--TC
** * ** * * * * *** * *
15970277 CTAGACTGGGAATGAACTCTATATGTGTAAGTCAACCCACAAAACGAGTGAGCGGGC-ACTCAGC
530 AGACACT-TTAATG---GCTA-CTG-G-CAG-CAAACCTGTAAA--A-T---C--TCAAAT--GC
**** * * * * * ** * ** * ** ** * ** * *
15970341 -CGGCCAGAGGGGCGGGA-TGCGT-AAGTCAG-GGATCGATCGGGTCCCCCTCTGTGTGCTAACG
577 TCTTTAAG-GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA-G
* * * * * * ****** ** *
15970402 -ATCCTGCTGCCGCAACCCTCAGTC-TG-GTCTGGTCTTAGACTGGGAATGAACTCC-GCAT-G-
640 TA-CCAGC-ACC-CATCGCACA-TCATGTG-C--G-C--ACAC-CCCCCGGCCCCCCTG-ATCGT
** * *** ** * * ** ***
15970461 CCTAAGCCAACCGATG-AAACGACCAGG--CGGGCGGGC-ACT-ACGCCGGCCA-GAGAGACGGG
693 CGGAA-CC--CCAATGCTGCCGGTCAGGTTC-TGCTGGCGA-TGGTGCC--CCACGA-AGA-AAA
* *** **** * * * *** ** * * ** *
15970520 ATGC-GCA--AACCGTAGATG-GATAGGGTGGTAGGTGGGTTTGGGTA-CAT---C-TTCATATT
749 ATGCGGCACCAA-C--ACATGCCCGAGCCCAGCATGT-GCTACCGCAACCCTCGGCGGTCCGATC
* ** * *** * ** ** * *
15970576 TTTG-CATGCCAATG-CCATTTTTATGGCTTGTAAATTCAT-ACAATGGTC-CCTTAAGCCTTCA
810 TTAGAC-TGGGAATGAAC-TCCGTAT-GC-T-TAGA--C-TGGGAATGAACTCCGTATGCC-T-A
* * ** * * * *
15970637 CGTGAAGTTTCATGGCAAGACCACTCGTTTTC
865 AGTCAA--CCCA-CG-AA-ACGA-GCG--TGC
*** ** * * * ***** **** ***** ** *
15970669 TATTTTTCATGATTTTCGAAACCTTTTACA-GTTTAAGATTTTTTAAAATTTTTTCGGAAAGACT
1 GGGTGCTCA-G----CCG--GCC----AGAGGGGCGGGA---TGCGCAA--GCCGGGGATCGGC-
** * ** * ** * **** * *
15970733 TTTGTTCCGAAACT-TG-GAAGACATGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAAATTCA
49 -CGGGTCC--CCCTCTGCG-TG-C-TG--CC--G-A-TCCTGCT-GC-TGCAAC-CCTCAGTTCT
* * * * * * **** * * ***
15970795 GCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGA-C-A
99 GGT-----CT--GA-TCT--TAGA--CTGGGA--A--TGAACTCCGTATGCCTAAGCCA-ACCGA
* * ** * *** ** **** * **** * ** * *
15970858 CTTTAATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGGTGTGAGTTC
147 C--GAA--AC-AGAGGCGGGCGGGCGGGGGGCA-CT---ACGC-CGGCCAGAGAGACGGGA-TGC
* *** ** *** * * **
15970921 TCAAGGTTTGATGAGGGATAGGG-GGCCAATATAAGGGCTAAGTACCAGCACCATCGCACATCAT
201 GCAAGCCGTG--GATCGATAGGGTGG----TAGGTGGG-T--TTA--GGCA-CATC-TTCAT-AT
* ** *** * ** ** * * *** ** * * * *
15970985 GTGC-GCACACCCCCCGGCC-TCCTCGATCAC-CGGAACCCCA-ACGCT-G-CCGGTCAGGTTCT
252 -TTCTG--CATGCCAATGCCAT-TTTTATGGCTTGTAAATTCATACAATGGTCC-CTTAAG-CCT
* ** ** * ** * * * * * *** *
15971044 CCAGCGATG--GTGCCCCGACGAAGTTTGGTCACATCTTCGTATTTTT---G-TGTGCCAATGCC
311 TCA-CG-TGAAGTTTCATGGC-AAG--ACGACTCGTTTTC-TATTTTTCACGATTTTTGAA--AC
* ** * ** * ***** *** ** ** *** * * *
15971103 ATTTTTATGGCTT-GTAAATTCATACAA-CGGCCCCTTA--AGCCTTCACGTGAAGTTTCATGGC
368 -TTTTTACGG-TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA---ACTTGGT
** * * * * ** **** *** * * * *** *
15971164 A-ACACGACTCATTTTCTATTT-TTCACAATTTTTAAAACTTTTTGCGGTTCAGGATTTTTGAAA
428 AGACGTGA-TCCTTGTATTTTTGTTGGC-ATGCACAAAA-AAATT-CAGCT-A-AAAACTCG--A
* * * * * *** * **
15971227 ATTTTTTCCGAAGGAGTTTTG-GCCCCAAAGTT-AGTGGACGTGAT--CC--TT--GTA-TTTTT
485 A--GTGTAC-AA-GA-TTTTGTG-ACC--ATTTGA-AAAAAGTG-TCCCCATTTCAG-ACACTTT
** * ** * * * * ** ****
15971283 TTTGGCT--TGTACAAAAAAATTCAGCTAAAAACTCAAA-G-TGTACAAGATTTTGTGA--TCAT
539 AATGGCTACTG-GC-AGCAAA-CCTG-TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC--
***** **** **** * * * * * * ** ** * * *
15971342 TTGAAAAAAG-TGTCCCCAT-TTCAGACACTTTAATGG-CTACTGGCAGCAAAC-TTGTAGAATC
598 TTGAGGTTTGATG-AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA-CA--
* * ****** **** * ** ** ** * ** * *
15971403 TCAAGTGCTCTTTA-AGGGGGTGTG-AGTTCTGGA-GGTTTG-A--TGAGGGATAGGGGGCCA-A
659 TCATGTGCGC---ACACCCCCCG-GCCCCCCT-GATCGTCGGAACCCCAATGCT-GCCGGTCAGG
** * * * * * * * * * *
15971461 TATAAG--GGCCA-AGTACCAGCACCAATCGAACATTATG-TGCA-C-ACAC--CCCCCAGCCCC
718 T-TCTGCTGGCGATGGTGCC-CCACGAA--GAA-A-AATGCGGCACCAACACATGCCCGAGCCCA
* * ** * * * * * * * *
15971518 CCGATCGCCGGAACCCCAATGTCATCGGTCAGGTTCTCCA-GTGATG-CTCCGGCAATG--GTGC
777 GC-AT-G-TGCTACCGCAA--CCCTCGG-C-GG-TC-CGATCTTA-GACT--GGGAATGAACT-C
* * *** * * * * **
15971579 CCTGACGAAGAAAAATGCGGCACCA-GCACATGCCCG-A-GTCCAACATGTGC-TGCCAC--AAC
829 CGT-ATG-CTTAGACTG-GG-A--ATGAAC-T--CCGTATG-CCTA-A-GT-CAACCCACGAAAC
***
15971638 CCTCGAT-C
881 GAGCG-TGC
* * * ** ** * * ** ** * * * ***
15971646 TGGTCCGATCTTAGACTGGGAATGA-GCTCCGTATGC-TTAGATTGGGAAT-GAACTC-CGTATG
1 GGGT--G--CTCAG-CCGGCCA-GAGGGGCGGGATGCGCAAG-CCGGGGATCG-GC-CGGGTCCC
** ** * * ** * ** **** * *
15971707 CCTAAGTC-AAC-CCACGAAACGAGCGTGCGGGCACTCAGCCGGGC-GGAGGGGTGTGATGCATA
57 CCTCTG-CGTGCTGC-CG-ATCCTGC-TGC-TGCA---A-CC-CTCAGTTCTGGTCTGAT-CTTA
* * * * * * * * * * ** * *** *
15971769 -AGCCGGGGATCGATCGGGTCCCCT-T--CTACGTGCTATCGATCCTGCTACCTCA-ACCCTCAA
111 GA-CTGGGAAT-GAAC---T-CCGTATGCCTAAG-CCAACCGA--C-G-AAACAGAGGCGGGC-G
*** *** * ** ** *** *** *** *
15971829 TTTGGTCTG-ATCTTA-GACTGGGAATGA-ACTCCATATGTTTAAGCCAACCGA-CGAAATGAGC
164 GGCGGGGGGCA-C-TACG-CCGGCCA-GAGAGACGGGATGCGCAAGCC-GTGGATCG--AT-AGG
* * * ** * *** *
15971890 G-GGCAGGTAGGAGTGCT-GGCACTACGCCGGCCAGAGAGAC-GAGATGCGCAA-GCCGTGGATC
221 GTGGTAGGT-GG-GT-TTAGGCAC-A--TC-TTCATA-TTTCTG-CATGC-CAATGCC----AT-
* * * * ** * * * *
15971951 GATAGGGTGGTAGGTGTGTTTAGGTACA-TC-TTCATAGTTTTACGTGCAAATGCCATTTTTATG
271 --T----T-TTA--TG-GCTT--GTAAATTCATACA-A-TGGTCCCT--TAA-GCC---TTCA--
* * * * * * *
15972014 GCTTGTAAATTCATATAGTGGTCCCTTAAGACTTCACGTGAAGATTCATGGCAAGACGACTCGTT
314 -CGTG-AAGTT--T-CA-TGG---C--AAGAC--GAC-T--CG-TT--T------TCTA-T--TT
** * * *
15972079 TTCTATTTTCCACGATTTTCAAAACTTTTTGCGGTTCAGGATTTTTGAAAATTTTTTCGGAAGGA
351 TT--------CACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* * * *
15972144 GTTTTGGCCCCAAACTTGGTGGACTTGATCCTTGTATTTTTTTTGGCTTGCACAAAAAAATTCAG
408 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
*
15972209 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTT
473 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * *
15972274 TAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGGTGTGAGTTCTCGA
538 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTTGA
* * *
15972339 GGTTTGATGAGGGATAGGGGTCCAATATAAGGGCCAAGTACCAGTACCCATCGTACA-CATGTGC
602 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * *
15972403 GTACACCCCTCCCGGCCCCCCCGATCGTCAGAACCCCAATGCTGCCGATCAGGTTCT-CCGACGA
667 GCACA-CCC-CCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTGCTGGCGA
* * ** * *
15972467 TAGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCTAGTGTGTTCTACTGCAAC
730 TGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAAC
* * * * *
15972532 CCTTGATCTGGTCCGATCTTAGACTGGGAATGAACTTCGTATCCTTAGACTGAGAATGAACTCCG
794 CCTCG-GC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
15972597 TATGCCTAAGTCAACCCACGAAACGAGCGTGC
857 TATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * *
15972629 GGGTGCTCAACCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGACTGGGTCCCCGTCTACAT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* ** * *
15972694 GCTGCCGATCCTGCTGCTGCAACCCTC-GATCCAGTCCGATCTTAGACTAGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
15972758 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAAAGAGA
131 TGCCTAAGCCAACCGACGAAAC-AG-AGGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGA
*
15972823 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGT
193 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15972888 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCACATGAAGTT
258 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
15972953 TCATGGCAAGACGACTCGTTTTCTATTTTTCAC-AATTTTGAAACTTTTTGCGGTTTGGGATTTT
323 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
** * *
15973017 TTAAAAATTTTTT-TAAAGGATTTTTGGCCCCAAACTTGGTAGACTTGATCCTTGTACTTTTT-T
388 TT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGT
** * *
15973080 TCACATGCACAAAAAAATTCAGCTCAAAACTCGAAGTGTAGAAGATTTTGTGACCATTTGAAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * * *
15973145 GGTCTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * *
15973210 TAAGGGGGTGTGAGTTCTCGAAGTTTGATGAAGGATA---GG---------GGGCCAAGTACCAG
581 TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * * *
15973263 CACCCA-CTTCACATCATGTGCGAACACCCCTCGGCCCCCCCGATCGCCGGAAACCCAATGCTGC
646 CACCCATC-GCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGC
** * **
15973327 CGGTCAGGTTCTCCGACGATCCTCCGATGATGGTGCCCCGATGAAGAAAAATATGGCACCAACAC
710 CGGTCAGGTTCT-----G---CT--GGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACAC
* * ** *
15973392 AAGCCCGAGCCCAGCATGTGATGTCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAAC
764 ATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGG--CGGTCCGATCTTAGACTGGGAATGAAC
* * *
15973457 TCCATATCCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGC
827 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * ** *
15973519 GTGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGGGTCCCCCTTTGCGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * * *
15973584 GCTGTCGATCCTACTG-TAGCAACCCT-TGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGT
66 GCTGCCGATCCTGCTGCT-GCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
15973647 AGGCCTAAGCCAACCGACGAAACGAGCGGACGAGCGGGCGGGCGGGCATTACGCCGGCCAGAGAG
130 ATGCCTAAGCCAACCGACGAAAC-AGAGG-CGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAG
* * * *
15973712 ACGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTAGGTACACCTTCATATTTCTG
192 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* *
15973777 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGGTCCATTAAGCCTTCACGTGAAGT
257 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
** * * *
15973842 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACGTTTTATGGTTTGGGATTT
322 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTT
* *
15973907 TTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTT
387 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * *
15973972 GGCATGTACAAACAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
452 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * *
15974037 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAGTGCTTTTT
517 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * * * *
15974102 AAGGGGGTGTGAGTTCTCGACGTTTGATGAGAGATA-GGGGCCAATAAAAGGGCAAAGTACCAGC
582 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
15974166 ACCCATTGCACATCATGTGAGCACACCCGCCCGGCCCCCCCGAT-GTCGGAACACCAATGCCGCC
647 ACCCATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCC
* * * * * * *
15974230 GGTTAGGATCT-CCGACGATGGTGCCCCGACAAAGAAAAATGCGGCCCCAACACAAGCCCGAGCC
711 GGTCAGGTTCTGCTGGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACATGCCCGAGCC
***
15974294 CAGCATGTGCTGTTGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
775 CAGCATGTGCTACCGCAACCCTCGG-C-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
*
15974359 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGC
838 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
15974410 GGGTGCTCAGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGACTGGGTCCCTCTCTACGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCC-C-CT-C--
* * * * * * *
15974475 GTTGTCGATCCTGCTACCGATCCTGCTACCGCAACCCTC-GGTCCGGTCCGATCTTAGACTAGGA
61 --TG-CG----TGCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGA
* * **
15974539 ATGAACTCCGTATGCCTAAGCCAACCGATGAAAC-GA-GCGGGCGGGCGGCTGGGCGGTACTATA
119 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGC-G--GGG-GGCACTACG
* * *
15974602 TCGGCCAAATAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
180 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* *
15974667 TTCATATTTC--CAATGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCATTAAGC
245 TTCATATTTCTGC-ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * ** * *
15974730 CTTCACGTGAAGTTTCAAGGCGAGACGACTTGTTTGATTTTTTTCATGATTTTTGAAACTTTTTA
309 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA
* * * *
15974795 CGGTTCGGGATTTTTTTAAATTTTTT-GGACA-GAGTATTGGCCCCGAACTTGGTACACGTGATC
374 CGGTTCGGGATTTTTTAAAATTTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * * * *
15974858 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCAAAAAAATCGAAGTGTATAAGTTTTTATG
438 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
15974923 ACCATTCGAAAAAAGTGTCCCCATTTCAGACAACTTTAATGGCCTACCTGGCAGGCCAAACTTTG
503 ACCATTTGAAAAAAGTGTCCCCATTTCAGAC-ACTTTAATGG-CTA-CTGGCA-G-CAAAC-CTG
*
15974988 TAAAATCTCAAATGCTCTTTAAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
562 TAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
*
15975053 ATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCCGG-CCCCCTCG
626 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCT-G
* ** * *
15975117 ATCGTC-GAAACCCAATGCCACCAGTCAGGTTCTCCGGC-GACGCTCCAACGATGGTGCCCC-GG
688 ATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCT---GCTG--G------CGATGGTGCCCCACG
* * *
15975179 TTAAGAAAAATGCGGCACCAGCACATGCCCGA-CCCAGCATGTGTTGA-CGCAACCCTCGATCCG
742 --AAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT-ACCGCAACCCTCG--GCG
* * *
15975242 GTCCAATGTTAGACTGGGAATGAACCCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
802 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
15975307 TCAACCCACGAAACGAGCGTGC
867 TCAACCCACGAAACGAGCGTGC
* * * * * * *
15975329 GGGCT-TTAAACCGGCCAGAGAGACGGGATGCACAAGCCGGGGATCGGCCGGGTCCCCCTCTGTG
1 GGG-TGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCG
* ** * * * *
15975393 TGCTGGCGATCCTGCTGCCACAACCCTCGGTT-TGATCTGATCTTAGATTGTG-ATGAACTCCGT
65 TGCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
15975456 ATGCCTAAGCCAACTGACGAAAC-GA-GCGGACGGGCAGGCGGGCACTACGCCGGCCAGAGAGAT
130 ATGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGC-GGGGGGCACTACGCCGGCCAGAGAGAC
** *
15975519 GGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
194 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
15975584 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
259 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * ** **
15975649 CATGGCAAGACAAC-CTGTTTTCTATTTTTGACAATTTTCCAAAAACTTTTTGTGGTTCGGGATT
324 CATGGCAAGACGACTC-GTTTTCTATTTTTCACGATTTT--TGAAACTTTTTACGGTTCGGGATT
* * *
15975713 TTTTAAAATTTTTTTGGTAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGT
386 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
15975778 TGGCTTGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG-AAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* *
15975842 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTTTAAAATCTCAAATGCTCTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* *
15975907 TAAGGGGGTGTGAGTTCTTGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAG
581 TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* *
15975972 CACCCATCGCACATCAT-TGGCGCACACCCCCC-ACCACCCC-GATCGTCGGAACCCCAATGCCG
646 CACCCATCGCACATCATGT-GCGCACACCCCCCGGCC-CCCCTGATCGTCGGAACCCCAATGCTG
* ** * * * *
15976034 CCGATCAGGTTCTTCGGCGATGCTCCGACGACAGTGCCCCGGCAAAGAAAAATGTGGCACCAGCA
709 CCGGTCAGGTTC-T--GC--TG----G-CGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACA
* * * * *
15976099 CATGCCCGAG-CCAGCATGTGCTACCGTAACCCTCAGTCCAGTCTGATCTTACACTGGGAATGAA
763 CATGCCCGAGCCCAGCATGTGCTACCGCAACCCTC-G-GCGGTCCGATCTTAGACTGGGAATGAA
* * * *
15976163 CTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACCAAACGAGCGTTC
826 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * * * *
15976226 GGGCGCTCAGCCGACCAGAGGGGTGGGATGCGCAAGTCGGGTATCGGCCAGGTCCCTCTTTGTGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * * **
15976291 GCTACCGATCCAGCTGCTGCAACCTTCTG-TCCAGTCTGATCTTAGACTGGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
15976355 TGCCTAAGCCAACCGACG-AACGAGCAGGCAGGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGA
131 TGCCTAAGCCAACCGACGAAAC-AG-AGGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGA
* * * **
15976419 CTGGATGCGCAAGCTGTGGATCGATA-GGCGGTAGGTGGGTTTAGGCACATCTTCATATTTCCAC
193 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15976483 GTTCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
258 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * *
15976548 TCTTGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTT
323 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * ** *
15976613 TTAAAATTTTTTTGGAAAGAGTTTTGGTGCCAAACTTGGTAGACATGATCCTTGTATTTTTTGTT
388 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTT
* *
15976678 GGCATGCACAAAAGAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
452 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* *
15976743 GTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACTTGTAAAATCTCAAATGCTCTTT
517 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * * * * * *
15976808 GAGGGTGTGTGTGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAATTATCAGC
582 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * **
15976873 ACCCATCGCACATCATGTGCGCA-AGCCCCCCCGGTCCCCCC-GATCGCCTGCACCCAAATGCCA
647 ACCCATCGCACATCATGTGCGCACA--CCCCCCGG-CCCCCCTGATCGTCGGAACCCCAATGCTG
* *
15976936 CCAGTCAGGTTCTCTGGTGATGCTCCAGTGATGGTGCCCCGACGGAAG-AAAATAGCTGGGCACC
709 CCGGTCAGG-T-TCTGCTG--G---C---GATGGTGCCCC-AC-GAAGAAAAAT-GC--GGCACC
* ** * *
15977000 AGCACATGCTTGAGCCCAGCATGTGCTGCCGCAA-CCT------T-CGGTC-----C------TG
759 AACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATG
* * * *
15977046 ---TCCG-AT-CTTAGACTGGGAATCAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGT
824 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * *
15977106 GGGCGCTCAACTGGCCAGAGGGGCGAGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
** * ** * * * * *
15977171 GCTGCCGATCCTATTACCACAACCCT-TGGTCCGATCTGATCTTAGACTGGGAATCAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * * * *
15977235 TGCCCAAACCAACCAACAAAACA-A-----GCGGGC---GGGCACTACACCCGCCAAAGAGACGG
131 TGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGG
* * *
15977291 GAATTCGGCAAGCCGTGGATCGATAAGGTGGATAGG-GGGTTTAGGC-CA-CTCTCATATTTTTT
196 G-ATGC-GCAAGCCGTGGATCGATAGGGTGG-TAGGTGGGTTTAGGCACATCT-TCATA-TTTCT
***
15977353 GTGCGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
256 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * * *
15977418 TTTCATTGCAAGACGAATCGTTTTCTATTTTTCACGATTTTTGAACCTTTTTACGGATCGAGATT
321 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
* *
15977483 TTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGGAGACGTGATCCTTGTATTTTT-T
386 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
15977547 TGGCATGCATAAAAAAATTCAGCTAAAAAATCGAAGAGTACAAGATTTTGTGACCATTTGAAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
*
15977612 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATGCTCTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
15977677 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
581 TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * *
15977742 CACCCATCGCACATCATGTGCGGACACCCCCCGGCCCCCCAGATC-ACCGAACCCCAATGCCGCC
646 CACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCC
* * *
15977806 GATCAGGTTCTCCGATGATGCTCTGGCGATGGTGCCCCAGCGAAGAACAATGCGGCACCAGCACA
711 GGTCAGG-T-T-C-----TG--CTGGCGATGGTGCCCCA-CGAAGAAAAATGCGGCACCAACACA
* * * *
15977871 TCCCCGAGCCCAGCATGTGCTGCCACAATCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACT
765 TGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGG--CGGTCCGATCTTAGACTGGGAATGAACT
* *
15977936 CCGTATGCTTAGA-TCAGGAATGAACTCCGTATGCCTAAGTCAACCCATGTAAA-GAGCGTGC
828 CCGTATGCTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACG-AAACGAGCGTGC
* * * * * * * * * **
15977997 GGGCGCTCAACTGGCCAGAGGGGCGGGATGCGCAACCCAGGGATCAGTCGAGTCCCTCTCTATGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * * * **
15978062 GCTACCGATCCTGCTGCTGTAACCCT-TGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* ** *
15978126 TGCCTAAGCCAACCGACGAAAC-GA-----GCGGGC---GGGCTCTACATCGGCCAGAGAGACAG
131 TGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGG
* * *
15978182 CATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATG
196 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* *
15978247 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCT
261 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * ** *
15978312 TGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACCTTTTGTGGTTCGGGATTTTTTT
326 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* * *
15978377 AAAGTTTTTCGGAAGGTGTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
391 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* *
15978442 TGCCCAAAAAAATTCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
456 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* *
15978507 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAACGCTCTTTAAGG
521 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
** *
15978572 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACCAGCACCC
586 GGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* **
15978637 ATTGCACATCATGTGCGCACACCCCCCCAACCCCCCTGATCGTCGGAACCCCAATG-TCGCCGGT
651 ATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCT-GCCGGT
* * * * * * ** * *
15978701 CAGGTTCT-CCGACGATGCT--CCGACGATG----GTGCCCCAGGCAGCACATGCCCGAGCCCAG
714 CAGGTTCTGCTGGCGATGGTGCCCCACGAAGAAAAATGCGGCA-CCAACACATGCCCGAGCCCAG
* * *
15978759 CTTGTGCTGCTGCAACCCT--G-GGTCCGA---T---C------TG-A-T-C-----C-TAGACT
778 CATGTGCTACCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
** ** *
15978800 GGGAATGAACTCCGTATGTGTAAGTCAACCCATAAAACGA--GTGG
843 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * **** * *
15978844 GTGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATTAGGTCCCCTTTTGCG
1 G-GGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCG
** * * * *
15978909 TGCTAACGATCCTGCTG-TCGCAACCCTC-GGTCCGATCTGATCTTAGACTAGGAATGAACTCCG
65 TGCTGCCGATCCTGCTGCT-GCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * *
15978972 TATGCCTAAGCCAACCGATGAAACGAGCGGGCGAGCGGGCGGGCGGGCTCTACACCGGCCAGAGA
129 TATGCCTAAGCCAACCGACGAAAC-AG-AGGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGA
* * *
15979037 GACAGCATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCT
191 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
** * * *
15979102 GTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACGATGGTCCCTTAAGACTTCACATGAAG
256 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * **
15979167 TTTCTTGGCAAGACGACTCGTTTTCTATTTTTCACAAATTTTGAAACTTTTTGTGGTTCGGGATT
321 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATT
* *
15979232 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCGAAACTTGGTAGACGTGATCCCTGTATTTTTGT
386 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
15979297 TGGCATGCACAAAAAAATTCAGTTAAAAACCCAAAGTGTACAAGATTTTGTGACCATTTGAAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * * *
15979362 ATTATCCCTATTTCAGACACTTTAATGGCTACTGTCAGCAAACCTGTAAAATCTCAAATGCTCTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * * *
15979427 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGATGGATAGGGGGCCGATATAAGGGCCATGTACCAG
581 TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * ** ** *
15979492 CACCCATTGCACATTATGTGCACACACCCCCCGGCCATCCC-GATC-TCCAAAACCATAATGCCG
646 CACCCATCGCACATCATGTGCGCACACCCCCCGGCC-CCCCTGATCGT-CGGAACCCCAATGCTG
* * * * * *
15979555 TCGGTCACGTTCTCTGGCGATACTTTGGCGATGGTGCTCCGATGAAGAAAAATGCAGCACCAGCA
709 CCGGTCA-GGT-TCT---G---C--TGGCGATGGTGC-CCCACGAAGAAAAATGCGGCACCAACA
* * * * * * * *
15979620 CATGTCCGAGCCTAGAATGTGCTGCCACAACCCTCGGTCCAGTCCAATCTTAGACTGGGAATAAA
763 CATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGG--CGGTCCGATCTTAGACTGGGAATGAA
* *
15979685 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGT
826 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * * *
15979748 GGGAGCTCAGCCGGCTAGAGGGGTGGGATGCGCAAGCCGAGGATTGGTCGGCTCCCCCGCTGCGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * * * * * *
15979813 GCTGCCAATCCTACTGCCGTAACCCTCAG-TCCGGTCTGATCTTAGACTAGGAATGAACTCCGGA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
15979877 TGCGTAAGCCAACCGACGAAACGAGGTGGCGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGA
131 TGCCTAAGCCAACCGACGAAAC-A-GAGGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAGA
* * * *
15979942 CGGGATGTGCAAGCTGTGGATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTAC
193 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15980007 ATGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
258 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* *
15980072 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTGGAAAC-TTTT-CTGGTTTGGGATTT
323 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC-GGTTCGGGATTT
* * * *
15980135 TTTAAAATTTTTTGGGAAGGAGTTTTGGCCCTAAACTTGGTAGACGTGATCTTTGTATTTTTTTT
387 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGT
* *
15980200 TGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTATAAGATTTTGTGACCATTTGAAAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * *
15980265 AGTGTCCCCATTTCAAACACTTTAATGCCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* ** * *
15980330 TAAGGGGGTGTGAGCTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACTAG
581 TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * ** *
15980395 CACCCATCGCACATCATGTGCACACACCCCCTCGGCCGCCC-GATCACCGGAACCCCAATGCTGT
646 CACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCTGATCGTCGGAACCCCAATGCTGC
* *
15980459 CGGTCAGGTTCTCCGACGATGCTCCGGTGATGGTCCCCCGACGAAGAAAAATGCGGCACCAACAC
710 CGGTCAGG-T-T----C--TGCT--GGCGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACAC
* * * * * * *
15980524 ATGCCC-ATG-CCAACATGTGCTGCCGCAACCCT-GAATCCGGTCTGATCTGACACTGGGAATCA
764 ATGCCCGA-GCCCAGCATGTGCTACCGCAACCCTCG---GCGGTCCGATCTTAGACTGGGAATGA
* * * *
15980586 ACTCCATATGCTTAGACTGGAAATGAACTCCGTATGCCTAAGTCAACCCACCAAATGATG-GTGC
825 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA-GCGTGC
* * * * * * * * * * * * *
15980650 GGGCGCTCTGTCGGCAAG-GGGGTGAGATACGCAAGCCGAGGATCGACCGGGTCCCCTTTTACAT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
*
15980714 GCTGCCGATCCTGCTGCTGCAACCCTC-GGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
66 GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
15980778 TGCCCAAGCCAACCGACGAAAC-GA-GCAGGAGGGCTGGCGGGCATTACGCCGGCCAGAGAGACG
131 TGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGC-GGGGGGCACTACGCCGGCCAGAGAGACG
* * *
15980841 GGATGTGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTCCATATTTCTGCAT
195 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* *
15980906 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGACCTTTAAGCCTTCACGTGAAGTTTC
260 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * *
15980971 ATGGCAAGATGACTCGTTTTCTATTTTTCATGATTGTCGAAACTTTTTACGGTTCGGGATTTTTT
325 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT
* * *
15981036 TAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTACTTTTGTTGGC
390 AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
*
15981101 ATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
455 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
15981166 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-
520 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
15981230 GGGGTGTGAGTTC-TGTAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
585 GGGGTGTGAGTTCTTG-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * ** * *
15981294 CCATCACACATCATGTGCGCACACCCCCCGGCCTCCCTGATCGCCAGAACCCCAACACCGCCGGC
649 CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCCGGT
* **
15981359 CAGGTTCTTTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCTGCACCGGCACATGC
714 CAGGTTC--T-GC--TG----G-CGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAACACATGC
* * * **
15981424 CCGAGCCCAGCATGGGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTA
768 CCGAGCCCAGCATGTGCTACCGCAACCCTCGG--CGGTCCGATCTTAGACTGGGAATGAACTCCG
* **
15981489 TATG-TTAAGACTGGGAATGAACACCGTATGCCTAAGTCAACCCATAAAACGAGCGTGC
831 TATGCTT-AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* ** * * ** * *
15981547 CGGCACTCAGTCGGCCAGAGGGGCAGGATGCG-AAGCCGGGGATCGATCGGGTCCCCCTTTGTGT
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
** * *
15981611 GCTATCGATCTTGCTG-TCGTAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
66 GCTGCCGATCCTGCTGCT-GCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * ** *
15981674 ATACCTAAGCCAACTGACGAAACA-A-GCGGGCGGGCGAACGGGCACTACGCCAGCCAGAGAGAC
130 ATGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCG-GGGGGCACTACGCCGGCCAGAGAGAC
* *
15981737 GGGATGCG-ATAGCTGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
194 GGGATGCGCA-AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
15981801 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTT
258 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
15981866 TCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTT
323 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
*
15981931 TCAAAAATTTTTTAC--AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
388 T-TAAAATTTTTT-CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * * *
15981994 TGGCATGCACAAAACAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGTCCATTAG-AAAA
451 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
*
15982058 AGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
516 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
** *
15982123 TAAGGGGGTGTGAGTTCTCAAGGTTTGATCAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
581 TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * *
15982188 CACCCATCACACATCATGTGCGCAAACCCCCTTGGCCCCCC-GATCGCCGGAACCCCAATGCCGC
646 CACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCTGATCGTCGGAACCCCAATGCTGC
* * * *** * *
15982252 CGATCAAGTTCTTC-GGCGATGGTATG-CCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAG
710 CGGTCAGGTTCTGCTGGCGATGG--TGCCCCACGAAGAAAAATGCGGCACCAACACATGCCCGAG
**
15982315 CCCAGCATGTGCTGTCGCAACCCT---C-G---G----T---CT----A-G---TCCG-AT-CTT
773 CCCAGCATGTGCTACCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * *
15982356 AGACTGGGAATGAACTCCGTATGTCTAAGTCAACCAATGAAACGAGCGCGC
838 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * * * *
15982407 GGGCGCTCAGTCGACCAAAGGGGCAGGATGCGTAAGCCGAGGATCAGTCGGGTCCCCCTTCTGCG
1 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCC-TCTGCG
* * * * * *
15982472 TGCTACCGATCCTACTACCGCAACCCTCAG-CCTGGTCTGATCTTAGACTGGGAATGAACTCTGT
65 TGCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * * * * * *
15982536 ACGCCTAAGCCAACCGATGAAACGAGCGGATGGGTGGACGGGCGAGCACTACGCCAGCCAGAGAG
130 ATGCCTAAGCCAACCGACGAAAC-AGAGG-CGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAG
15982601 ACGGGATGCGCAAGC
192 ACGGGATGCGCAAGC
15982616 TATGGATCTT
Statistics
Matches: 18205, Mismatches: 3868, Indels: 3282
0.72 0.15 0.13
Matches are distributed among these distances:
847 6 0.00
848 179 0.01
849 39 0.00
850 4 0.00
851 1 0.00
852 312 0.02
853 109 0.01
854 2 0.00
855 2 0.00
856 377 0.02
857 96 0.01
858 10 0.00
859 33 0.00
860 753 0.04
861 87 0.00
862 292 0.02
863 32 0.00
864 132 0.01
865 528 0.03
866 53 0.00
867 15 0.00
868 242 0.01
869 308 0.02
870 404 0.02
871 44 0.00
872 222 0.01
873 331 0.02
874 165 0.01
875 40 0.00
876 95 0.01
877 181 0.01
878 19 0.00
879 52 0.00
880 213 0.01
881 54 0.00
882 16 0.00
883 18 0.00
884 22 0.00
885 5 0.00
886 63 0.00
887 9 0.00
888 10 0.00
889 235 0.01
890 1015 0.06
891 734 0.04
892 274 0.02
893 1372 0.08
894 238 0.01
895 52 0.00
896 558 0.03
897 1294 0.07
898 227 0.01
899 185 0.01
900 451 0.02
901 341 0.02
902 490 0.03
903 898 0.05
904 323 0.02
905 696 0.04
906 391 0.02
907 188 0.01
908 63 0.00
909 47 0.00
910 24 0.00
911 8 0.00
912 5 0.00
913 7 0.00
914 9 0.00
915 24 0.00
916 8 0.00
917 8 0.00
918 13 0.00
919 169 0.01
920 56 0.00
921 30 0.00
922 15 0.00
923 11 0.00
924 33 0.00
925 24 0.00
926 16 0.00
927 19 0.00
928 10 0.00
929 10 0.00
930 11 0.00
931 4 0.00
932 22 0.00
933 6 0.00
934 6 0.00
935 6 0.00
936 6 0.00
938 9 0.00
939 8 0.00
940 26 0.00
941 10 0.00
942 14 0.00
943 10 0.00
944 13 0.00
945 4 0.00
946 15 0.00
947 14 0.00
948 11 0.00
949 11 0.00
950 8 0.00
951 10 0.00
952 9 0.00
953 2 0.00
954 7 0.00
955 15 0.00
956 18 0.00
957 11 0.00
958 10 0.00
959 6 0.00
960 14 0.00
961 40 0.00
962 21 0.00
963 20 0.00
964 44 0.00
965 20 0.00
966 20 0.00
967 12 0.00
968 10 0.00
969 11 0.00
970 13 0.00
971 6 0.00
972 12 0.00
973 19 0.00
974 38 0.00
975 29 0.00
976 22 0.00
977 50 0.00
978 46 0.00
979 31 0.00
980 34 0.00
981 39 0.00
982 30 0.00
983 38 0.00
984 19 0.00
985 18 0.00
986 6 0.00
987 14 0.00
988 11 0.00
989 35 0.00
990 39 0.00
991 29 0.00
992 57 0.00
993 46 0.00
994 42 0.00
995 30 0.00
996 31 0.00
997 24 0.00
998 20 0.00
999 23 0.00
1000 53 0.00
1001 49 0.00
1002 33 0.00
1003 33 0.00
1004 13 0.00
1005 9 0.00
1006 15 0.00
1007 17 0.00
1008 9 0.00
1009 6 0.00
1010 10 0.00
1011 9 0.00
1012 3 0.00
1013 9 0.00
1014 19 0.00
1015 13 0.00
1016 20 0.00
1017 24 0.00
1018 35 0.00
1019 34 0.00
1020 29 0.00
1021 22 0.00
1022 15 0.00
1023 14 0.00
1024 502 0.03
1025 472 0.03
1026 657 0.04
1027 429 0.02
1028 410 0.02
1029 378 0.02
1030 612 0.03
1031 517 0.03
1032 443 0.02
1033 320 0.02
1034 485 0.03
1035 337 0.02
1036 448 0.02
1037 557 0.03
1038 337 0.02
1039 312 0.02
1040 294 0.02
1041 339 0.02
1042 332 0.02
1043 276 0.02
1044 363 0.02
1045 211 0.01
1046 180 0.01
1047 227 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
GCTGCCGATCCTGCTGCTGCAACCCTCAGTTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
TGCCTAAGCCAACCGACGAAACAGAGGCGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACGG
GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
GGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCTGCCGGTCA
GGTTCTGCTGGCGATGGTGCCCCACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
GTGCTACCGCAACCCTCGGCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
Found at i:15967137 original size:26 final size:27
Alignment explanation
Indices: 15967083--15967140 Score: 73
Period size: 30 Copynumber: 2.1 Consensus size: 27
15967073 CTCGTTCTGG
15967083 TCGGGTCCCCCTCTACGTGCAGGAGATCGA
1 TCGGGTCCCCCTCTACGTGC---AGATCGA
*
15967113 TCGGGTCCCCCTCTACGTGC-TATCGA
1 TCGGGTCCCCCTCTACGTGCAGATCGA
15967139 TC
1 TC
15967141 TTGCTACCGT
Statistics
Matches: 27, Mismatches: 1, Indels: 4
0.84 0.03 0.12
Matches are distributed among these distances:
26 7 0.26
30 20 0.74
ACGTcount: A:0.14, C:0.36, G:0.26, T:0.24
Consensus pattern (27 bp):
TCGGGTCCCCCTCTACGTGCAGATCGA
Found at i:15969634 original size:905 final size:904
Alignment explanation
Indices: 15967874--15969902 Score: 2925
Period size: 905 Copynumber: 2.2 Consensus size: 904
15967864 CCGGTCCGAT
* *
15967874 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAATGAGCGTGCGGGCGCTCAG-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGTGCTCAGC
* *
15967938 CAGGCCAGAGGGGCAGGATGCGCAAGTCGGGGATC-GACCGGGTCTCCCTCTGCATGCTGCCGAT
66 CA-GCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGA-CGGGTCACCCTCTGCATGCTGCCGAT
* * * * * * **
15968002 CATGCTGTCACAACCCTCGGTCTGGTCCGATCTTGGACTGGGAATGAACTCCATATACCTAAGAA
129 CATGCTGTCACAACCCTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
15968067 AACTGACGACATGAGCGAGCGGGCGGACGGGCGGAAGGGCACCTCGCCGGCCAGAGTGACGGGAT
194 AACCGACGAAACGAGCGAGCGGGCGGACGGGC---AGGGCACCTCGCCGGCCAGAGAGACAGGAT
15968132 GCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCA
256 GCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCA
15968197 ATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGG
321 ATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGG
*
15968262 CAAGACGACCCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGAGGTTCGGGATTTTTAAAAT
386 CAAGACGACCCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGAGGTTCGGGATTTTTAAAAT
* * * *
15968327 TTTTTCGAAAGGATTTTTGTCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
451 TTTTTCGAAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCA
*
15968392 CAAAAAAATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
516 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
15968457 ATTTTAGACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
581 ATTTCAGACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
15968522 GTGAGTTCTCGAGGTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCG
646 GTGAGTTCTCGAGGTTTGATGACGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCACCG
* *
15968587 CACATCATGTGCGCACACCCCCCCGCCCCTCCCGATCGCCGGAACCCCAATGCCGCTGGTCAGTT
711 CACATCATGTGCGCACACCCCCCCGCCCCTCCCGATCGCCGGAACCCCAATGCCGCTGATCAGGT
* * *
15968652 TCTCCGGCGATGCTCCAGTGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCACGAG
776 TCTCCGGCGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCACGAG
* *
15968717 CCCAGTATGTGCTACCACAACCCTCGATCCGATCCGATCTTAGACTACAAATGAAGTACGTATG
841 CCCAGCATGTGCTACCACAACCCTCGATCCGATCCGATCTTAGACTACAAATGAACTACGTATG
* * *
15968781 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGTGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * * *
15968846 CAGCCAGAGGGGTGGGATGCGTAAATCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCT
66 CAGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGACGGGTCACCCTCTGCATGCTGCCGATCA
* *
15968911 TGCTGCCATAACCCTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGTCACAACCCTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
15968976 CCGACGAAACGAGCGAGCGGGCGGGA-GGGC-GGGCA-CTACGTCGGCCAGAGAGATAGGATGCG
196 CCGACGAAACGAGCGAGCGGGC-GGACGGGCAGGGCACCT-CGCCGGCCAGAGAGACAGGATGCG
*
15969038 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGA-GTGCCAAT
259 AAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-ACGTGCCAAT
* *
15969102 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
323 GCCATTTTTATGGCTTATAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCA
* *
15969167 AGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTT-ACGGTTCGGGATTTTTTTAAAA
388 AGACGACCCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGA-GGTTCGGGA--TTTTTAAAA
* *
15969231 TTTTTTCGGAAGGAGTTTTGGCCCAAAACTTGGTGGACGTGATCCTTGTATTTTTGTTGGCACGC
450 TTTTTTCGAAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGC
* * *
15969296 ACAAAGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTGCC
515 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
15969361 GATTTCAGACACTTTAATGGCTACTGGCC-GCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGG
580 CATTTCAGACACTTTAATGGCTACT-GCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
15969424 GTGGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAGTATAAGGGCCAAGTACCAGCACCCA
644 GT-GTGAGTTCTCGAGGTTTGATGACGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCA
* * ** * *
15969489 TCGCACATCATGTGTGCACACCCTCCTGGCCCC-CCCGATCGTCC-GAACCCTAATGCTG-TCGA
708 CCGCACATCATGTGCGCACACCC-CCCCGCCCCTCCCGATCG-CCGGAACCCCAATGCCGCT-GA
*
15969551 TCAGGTTCTCCGGTGATGCTCC-GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
770 TCAGGTTCTCCGGCGATGCTCCAG-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
* * * * * * * *** *
15969615 GCCCGAGCCCTGCATGTGCTGCCGCAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAACTC
834 GCACGAGCCCAGCATGTGCTACCACAACCCTCGATCCGATCCGATCTTAGACTACAAATGAACTA
15969680 CGTATG
899 CGTATG
* *
15969686 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACTCGCGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * *
15969751 CGGCCAGAGGGGCGGGATGAGCAAGCCAGGGATC-GACTGGGTCACCCTCTGTATGCTGTCGATC
66 CAGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGAC-GGGTCACCCTCTGCATGCTGCCGATC
* * * * * ** * *
15969815 CTACTATCACAACCCTCTGTTTGGTCTGATATTAGACTCTGAATGAACTTCGTATGCATAAGCCA
130 ATGCTGTCACAACCCTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
15969880 ACCGACGAAACAAGCGGGCGGGC
195 ACCGACGAAACGAGCGAGCGGGC
15969903 ATGATCCTTG
Statistics
Matches: 999, Mismatches: 108, Indels: 32
0.88 0.09 0.03
Matches are distributed among these distances:
902 3 0.00
903 197 0.20
904 10 0.01
905 582 0.58
906 12 0.01
907 189 0.19
908 6 0.01
ACGTcount: A:0.25, C:0.24, G:0.26, T:0.25
Consensus pattern (904 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGTGCTCAGC
CAGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGACGGGTCACCCTCTGCATGCTGCCGATCA
TGCTGTCACAACCCTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGAGCGGGCGGACGGGCAGGGCACCTCGCCGGCCAGAGAGACAGGATGCGAA
AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCC
ATTTTTATGGCTTATAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGA
CGACCCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGAGGTTCGGGATTTTTAAAATTTTTT
CGAAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCACAAAA
AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
AGACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
TTCTCGAGGTTTGATGACGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCACCGCACAT
CATGTGCGCACACCCCCCCGCCCCTCCCGATCGCCGGAACCCCAATGCCGCTGATCAGGTTCTCC
GGCGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCACGAGCCCAG
CATGTGCTACCACAACCCTCGATCCGATCCGATCTTAGACTACAAATGAACTACGTATG
Found at i:15969689 original size:26 final size:26
Alignment explanation
Indices: 15969660--15969712 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15969650 CTGATCCGAT
15969660 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15969686 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15969712 C
1 C
15969713 CTAAGTGAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15971531 original size:511 final size:510
Alignment explanation
Indices: 15970555--15971563 Score: 1520
Period size: 511 Copynumber: 2.0 Consensus size: 510
15970545 TGGTAGGTGG
*
15970555 GTTTGGGTACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
1 GTTTGGGTACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAC
* * * **
15970620 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTTCTATTTTTCATGATTTT
66 GGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACACCACTCATTTTCTATTTTTCACAATTTT
* * * * ** * *
15970685 CGAAACCTTTTACAGTTTAAGATTTTTTAAAATTTTTTCGGAAAGACTTTTGTTCCGAAACTTGG
131 CAAAACCTTTTACAGTTCAAGATTTTTGAAAATTTTTTCCGAAAGACTTTTGGCCCCAAACTTAG
15970750 AAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
196 AAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
*
15970815 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAA
261 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
15970880 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
326 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
* * * * *
15970945 GCCAATATAAGGGCTAAGTACCAGCACCATCGCACATCATGTGCGCACACCCCCCGGCCTCCTCG
391 GCCAATATAAGGGCCAAGTACCAGCACCATCGAACATCATGTGCACACACCCCCCAGCCTCCCCG
15971010 ATCACCGGAACCCCAACGCTGC-CGGTCAGGTTCTCCAGCGATGGTGCCCCGACGAA
456 ATCACCGGAACCCCAACG-T-CACGGTCAGGTTCTCCAGCGATGGTGCCCCGACGAA
* **
15971066 GTTT-GGTCACATCTTCGTATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
1 GTTTGGGT-ACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
*
15971130 CGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACACGACTCATTTTCTATTTTTCACAATTT
65 CGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACACCACTCATTTTCTATTTTTCACAATTT
* * * * * * * *
15971195 TTAAAACTTTTTGCGGTTCAGGATTTTTGAAAATTTTTTCCGAAGGAGTTTTGGCCCCAAAGTTA
130 TCAAAACCTTTTACAGTTCAAGATTTTTGAAAATTTTTTCCGAAAGACTTTTGGCCCCAAACTTA
** * * * *
15971260 GTGGACGTGATCCTTGTATTTTTTTTGGCTTGTACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
195 GAAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
*
15971325 CAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
260 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * **
15971390 AACTTGTAGAATCTCAAGTGCTCTTTAAGGGGGTGTGAGTTCTGGAGGTTTGATGAGGGATAGGG
325 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGG
*
15971455 GGCCAATATAAGGGCCAAGTACCAGCACCAATCGAACATTATGTGCACACACCCCCCAGCC-CCC
390 GGCCAATATAAGGGCCAAGTACCAGCACC-ATCGAACATCATGTGCACACACCCCCCAGCCTCCC
* * *
15971519 CGATCGCCGGAACCCCAATGTCATCGGTCAGGTTCTCCAGTGATG
454 CGATCACCGGAACCCCAACGTCA-CGGTCAGGTTCTCCAGCGATG
15971564 CTCCGGCAAT
Statistics
Matches: 446, Mismatches: 48, Indels: 8
0.89 0.10 0.02
Matches are distributed among these distances:
509 1 0.00
510 4 0.01
511 414 0.93
512 27 0.06
ACGTcount: A:0.27, C:0.22, G:0.20, T:0.31
Consensus pattern (510 bp):
GTTTGGGTACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAC
GGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACACCACTCATTTTCTATTTTTCACAATTTT
CAAAACCTTTTACAGTTCAAGATTTTTGAAAATTTTTTCCGAAAGACTTTTGGCCCCAAACTTAG
AAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCACCATCGAACATCATGTGCACACACCCCCCAGCCTCCCCG
ATCACCGGAACCCCAACGTCACGGTCAGGTTCTCCAGCGATGGTGCCCCGACGAA
Found at i:15971684 original size:26 final size:26
Alignment explanation
Indices: 15971655--15971707 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15971645 CTGGTCCGAT
*
15971655 CTTAGACTGGGAATGAGCTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15971681 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15971707 C
1 C
15971708 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15972588 original size:26 final size:26
Alignment explanation
Indices: 15972549--15972599 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15972539 CTGGTCCGAT
* *
15972549 CTTAGACTGGGAATGAACTTCGTATC
1 CTTAGACTGAGAATGAACTCCGTATC
15972575 CTTAGACTGAGAATGAACTCCGTAT
1 CTTAGACTGAGAATGAACTCCGTAT
15972600 GCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.20, G:0.22, T:0.29
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATC
Found at i:15974359 original size:26 final size:26
Alignment explanation
Indices: 15974330--15974382 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15974320 CTGGTCCGAT
15974330 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15974356 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15974382 C
1 C
15974383 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15974497 original size:12 final size:12
Alignment explanation
Indices: 15974480--15974505 Score: 52
Period size: 12 Copynumber: 2.2 Consensus size: 12
15974470 TACGTGTTGT
15974480 CGATCCTGCTAC
1 CGATCCTGCTAC
15974492 CGATCCTGCTAC
1 CGATCCTGCTAC
15974504 CG
1 CG
15974506 CAACCCTCGG
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 14 1.00
ACGTcount: A:0.15, C:0.42, G:0.19, T:0.23
Consensus pattern (12 bp):
CGATCCTGCTAC
Found at i:15975286 original size:26 final size:26
Alignment explanation
Indices: 15975250--15975301 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15975240 CGGTCCAATG
15975250 TTAGACTGGGAATGAACCCCGTATGC
1 TTAGACTGGGAATGAACCCCGTATGC
*
15975276 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACCCCGTATGC
15975302 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.21, G:0.27, T:0.25
Consensus pattern (26 bp):
TTAGACTGGGAATGAACCCCGTATGC
Found at i:15976256 original size:897 final size:898
Alignment explanation
Indices: 15971093--15982615 Score: 13996
Period size: 897 Copynumber: 12.9 Consensus size: 898
15971083 TATTTTTGTG
* *
15971093 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGGCCCCTTAAGCCTTCACGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * * *
15971158 CATGGCAACACGACTCATTTTCTATTTTTCACAATTTTTAAAACTTTTTGCGGTTCAGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * * * * *
15971223 GAAAATTTTTTCCGAAGGAGTTTTGGCCCCAAAGTTAGTGGACGTGATCCTTGTATTTTTTTTGG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * * *
15971288 CTTGTACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGT
196 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
15971353 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAGAATCTCAAGTGCTCTTTAA
261 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
15971418 GGGGGTGTGAGTTCTGGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
326 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * * * ** *
15971483 CAATCGAACATTATGTGCACACACCCCCCAGCCCCCCGATCGCCGGAACCCCAATGTCATCGGTC
391 CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGATC
* * * * * *
15971548 AGGTTCTCCAGTGATGCTCCGGCAATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCC
456 AGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
* * * * * *
15971613 CGAGTCCAACATGTGCTGCCACAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAGCTCCGT
521 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* *
15971678 ATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTC
586 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * * ** * * **
15971743 AGCCGGGCGGAGGGGTGTGATGCATAAGCCGGGGATCGATCGGGTCCCCTTCTACGTGCTATCGA
651 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGA
* * ** ** * **
15971808 TCCTGCTACCTCAACCCTCAATTTGGTCTGATCTTAGACTGGGAATGAACTCCATATGTTTAAGC
716 TCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
15971873 CAACCGACGAAATGAGCGGGCAGGTAG-GAGTGCTGGCACTACGCCGGCCAGAGAGACGAGATGC
781 CAACCGACGAAACGAGCGGAC-GG--GCG-G-GCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * *
15971937 GCAAGCCGTGGATCGATAGGGTGGTAGGTGTGTTTAGGTACATCTTCATAGTTT-TACG
841 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCTACA
* * * * *
15971995 TGCAAATGCCATTTTTATGGCTTGTAAATTCATATAGTGGTCCCTTAAGACTTCACGTGAAGATT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* ** *
15972060 CATGGCAAGACGACTCGTTTTCTATTTTCCACGATTTTCAAAACTTTTTGCGGTTCAGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * * *
15972125 GAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTGGACTTGATCCTTGTATTTTTTTTGG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
*
15972190 CTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
196 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
15972255 GTCCCCATTTCGGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAA
261 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
15972320 GGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGTCCAATATAAGGGCCAAGTACCAGTA
326 -GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * *
15972385 CCCATCGTACA-CATGTGCGTACACCCCTCCCGGCCCCCCCGATCGTCAGAACCCCAATGCTGCC
390 CCCATCGCACATCATGTGCGCACA-CCC-CCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCC
* *
15972449 GATCAGG----T------T-CTCCGACGATAGTGCCCCGACGAAGAAAAATGCGGCACCAACACA
452 GATCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* ** * * * * * *
15972503 TGCCCGAGCCTAGTGTGTTCTACTGCAACCCTTGATCTGGTCCGATCTTAGACTGGGAATGAACT
517 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT
* * * *
15972568 TCGTATCCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGT
582 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * *
15972633 GCTCAACCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGA-CTGGGTCCCCGTCTACATGCT
647 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCT
* * * * *
15972697 GCCGATCCTGCTGCTGCAACCCTCGATCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCC
711 GCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * *
15972762 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAAAGAGACGGG
776 TAAGCCAACCGACGAAACGA----GCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
**
15972827 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTA
837 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
* *
15972889 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCACATGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* *
15972954 CATGGCAAGACGACTCGTTTTCTATTTTTCAC-AATTTTGAAACTTTTTGCGGTTTGGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
** * *
15973018 TAAAAATTTTTT-TAAAGGATTTTTGGCCCCAAACTTGGTAGACTTGATCCTTGTACTTTTT-TT
131 T-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTT
** * * *
15973081 CACATGCACAAAAAAATTCAGCTCAAAACTCGAAGTGTAGAAGATTTTGTGACCATTTGAAAAAG
194 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * *
15973146 GTCTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTT
259 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
15973211 AAGGGGGTGTGAGTTCTCGAAGTTTGATGAAGGATA---GG---------GGGCCAAGTACCAGC
324 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
15973264 ACCCA-CTTCACATCATGTGCGAACACCCCTCGGCCCCCCCGATCGCCGGAAACCCAATGCTGCC
389 ACCCATC-GCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCC
* * * * * * ** *
15973328 GGTCAGGTTCTCCGACGATCCTCCGATGATGGTGCCCCGATGAAGAAAAATATGGCACCAACACA
452 GATCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * *
15973393 AGCCCGAGCCCAGCATGTGATGTCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACT
517 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT
* * * * *
15973458 CCATATCCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGTGT
582 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * *
15973523 GCTCAACCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGGGTCCCCCTTTGCGTGCTG
647 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTG
* * ** * * * *
15973588 TCGATCCTACTGTAGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTAGGCCT
712 CCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
*
15973653 AAGCCAACCGACGAAACGAGCGGACGAGCGGGCGGGCGGGCATTACGCCGGCCAGAGAGACGGGA
777 AAGCCAACCGACGAAACGAGC-G--GA-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
* * * * *
15973718 TGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTAGGTACACCTTCATATTTCTGCA
838 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
* *
15973779 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGGTCCATTAAGCCTTCACGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
** * ** *
15973844 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACGTTTTATGGTTTGGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* *
15973909 TAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * *
15973974 CATGTACAAACAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
196 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
15974039 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAGTGCTTTTTAA
261 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * *
15974104 GGGGGTGTGAGTTCTCGACGTTTGATGAGAGATA-GGGGCCAATAAAAGGGCAAAGTACCAGCAC
326 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * *
15974168 CCATTGCACATCATGTGAGCACACCCGCCCGGCCCCCCCGAT-GTCGGAACACCAATGCCG-C--
391 CCATCGCACATCATGTGCGCACACCC-CCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGA
* * * * *
15974229 -C-GG---TT-AG-GAT-CTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCCCCAACACAAG
454 TCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
** *
15974286 CCCGAGCCCAGCATGTGCTGTTGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCC
519 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
* *
15974351 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGC
584 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* *
15974416 TCAGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGA-CTGGGTCCCTCTCTACGTGTTGT
649 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCC-C-CT-C----TG-
* * * *
15974480 CGATCCTGCTACCGATCCTGCTACCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAAC
705 CG----TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAAC
* * ***
15974545 TCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGC-GGCTGGGCGGTACTATATCGGCCA
766 TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGC-GGGC---ACTACGCCGGCCA
* *
15974609 AATAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
827 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*
15974674 TTCCA-A
892 TTCTACA
* *
15974680 TGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCACGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * ** * * *
15974745 CAAGGCGAGACGACTTGTTTGATTTTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * * *
15974810 TTAAATTTTTT-GGACA-GAGTATTGGCCCCGAACTTGGTACACGTGATCCTTGTATTTTTGTTG
131 TAAAATTTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * * * *
15974873 GCATGCACAAAAAAATTCAGCAAAAAAATCGAAGTGTATAAGTTTTTATGACCATTCGAAAAAAG
195 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
*
15974938 TGTCCCCATTTCAGACAACTTTAATGGCCTACCTGGCAGGCCAAACTTTGTAAAATCTCAAATGC
260 TGTCCCCATTTCAGAC-ACTTTAATGG-CTA-CTGGCA-G-CAAAC-CTGTAAAATCTCAAATGC
15975003 TCTTTAAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
319 TCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
15975068 ACCAGCACCCATCACACATCATGTGCGCACACCCCCCCCGGCCCCCTCGATCGTC-GAAACCCAA
383 ACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCC-CGATCGCCGGAACCCCAA
* * * * ***
15975132 TGCCACC-AGTCAGGTTCTCCGGCGACGCTCCAACGATGGTGCCCCGGTTAAGAAAAATGCGGCA
445 TGCCGCCGA-TCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCA
* * * * *
15975196 CCAGCACATGCCCGA-CCCAGCATGTGTTGACGCAACCCTCGATCCGGTCCAATGTTAGACTGGG
509 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG
*
15975260 AATGAACCCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
574 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
** * * * * * **
15975325 GTGCGGGCTTTAAACCGGCCAGAGAGACGGGATGCACAAGCCGGGGATCGGCCGGGTCCCCCTCT
639 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCT
* * * ** * * *
15975390 GTGTGCTGGCGATCCTGCTGCCACAACCCTCGGTTTGATCTGATCTTAGATTGTG-ATGAACTCC
704 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * *
15975454 GTATGCCTAAGCCAACTGACGAAACGAGCGGACGGGCAGGCGGGCACTACGCCGGCCAGAGAGAT
769 GTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
**
15975519 GGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
834 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
15975584 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * ** *
15975649 CATGGCAAGACAAC-CTGTTTTCTATTTTTGACAATTTTCCAAAAACTTTTTGTGGTTCGGGATT
66 CATGGCAAGACGACTC-GTTTTCTATTTTTCACGATTTT--TGAAACTTTTTGCGGTTCGGGATT
* * *
15975713 TTTTAAAATTTTTTTGGTAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGT
128 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
15975778 TGGCTTGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG-AAAA
193 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* *
15975842 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTTTAAAATCTCAAATGCTCTT
258 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * *
15975907 TAAGGGGGTGTGAGTTCTTGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAG
323 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* *
15975972 CACCCATCGCACATCAT-TGGCGCACACCCCCC-ACCACCCCGATCGTCGGAACCCCAATGCCGC
388 CACCCATCGCACATCATGT-GCGCACACCCCCCGGCC-CCCCGATCGCCGGAACCCCAATGCCGC
** * * *
15976035 CGATCAGGTTCTTCGGCGATGCTCCGACGACAGTGCCCCGGCAAAGAAAAATGTGGCACCAGCAC
451 CGATCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * * *
15976100 ATGCCCGAG-CCAGCATGTGCTACCGTAACCCTCAGTCCAGTCTGATCTTACACTGGGAATGAAC
516 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * *
15976164 TCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACCAAACGAGCGTTCGGG
581 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * ** * * * *
15976229 CGCTCAGCCGACCAGAGGGGTGGGATGCGCAAGTCGGGTATCGGCCAGGTCCCTCTTTGTGTGCT
646 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * *
15976294 ACCGATCCAGCTGCTGCAACCTTCTGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
711 GCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * *
15976359 TAAGCCAACCGACG-AACGAGCAGGCAGGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGACTGG
776 TAAGCCAACCGACGAAACGAGC-GG-A--CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
15976423 ATGCGCAAGCTGTGGATCGATA-GGCGGTAGGTGGGTTTAGGCACATCTTCATATTTCCACG
837 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
*
15976484 TTCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * *
15976549 CTTGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * ** *
15976614 TAAAATTTTTTTGGAAAGAGTTTTGGTGCCAAACTTGGTAGACATGATCCTTGTATTTTTTGTTG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTG
* *
15976679 GCATGCACAAAAGAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
195 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
15976744 TGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACTTGTAAAATCTCAAATGCTCTTTG
260 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * * * *
15976809 AGGGTGTGTGTGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAATTATCAGCA
325 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * *
15976874 CCCATCGCACATCATGTGCGCA-AGCCCCCCCGGTCCCCCCGATCGCCTGCACCCAAATGCCACC
390 CCCATCGCACATCATGTGCGCACA--CCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCC
* *
15976938 -AGTCAGGTTC-TCTGGTGATGCTCC-AGTGATGGTGCCCCGACGGAAG-AAAATAGCTGGGCAC
452 GA-TCAGGTTCTTC-GGCGATGCTCCGA-CGATGGTGCCCCGAC-GAAGAAAAAT-GC--GGCAC
**
15976999 CAGCACATGCTTGAGCCCAGCATGTGCTGCCGCAA-CCT---T-C-G---G-TC-----C-----
510 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGA
* * *
15977044 -TG---TCCG-AT-CTTAGACTGGGAATCAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCG
575 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * *
15977103 TGTGGGCGCTCAACTGGCCAGAGGGGCGAGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTA
640 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTG
** * * * * *
15977168 CGTGCTGCCGATCCTATTACCACAACCCTTGGTCCGATCTGATCTTAGACTGGGAATCAACTCCG
705 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * * * *
15977233 TATGCCCAAACCAACCAAC-AAA--A-C--A--AGCGGGCGGGCACTACACCCGCCAAAGAGACG
770 TATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* *
15977290 GGAATTCGGCAAGCCGTGGATCGATAAGGTGGATAGG-GGGTTTAGGC-CA-CTCTCATATTT-T
835 GG-ATGC-GCAAGCCGTGGATCGATAGGGTGG-TAGGTGGGTTTAGGCACATCT-TCATATTTCT
***
15977351 TTG
896 ACA
15977354 TGCGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
1 T--GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * * * *
15977419 TTCATTGCAAGACGAATCGTTTTCTATTTTTCACGATTTTTGAACCTTTTTACGGATCGAGATTT
64 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTT
* *
15977484 TTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGGAGACGTGATCCTTGTATTTTT-TT
129 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * *
15977548 GGCATGCATAAAAAAATTCAGCTAAAAAATCGAAGAGTACAAGATTTTGTGACCATTTGAAAAAA
194 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
*
15977613 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATGCTCTTT
259 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
15977678 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
324 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* *
15977743 ACCCATCGCACATCATGTGCGGACACCCCCCGGCCCCCCAGATCACC-GAACCCCAATGCCGCCG
389 ACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATCGCCGGAACCCCAATGCCGCCG
* ** * * *
15977807 ATCAGGTTCTCCGATGATGCTCTGGCGATGGTGCCCC-AGCGAAGAACAATGCGGCACCAGCACA
453 ATCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACA
* * * *
15977871 TCCCCGAGCCCAGCATGTGCTGCCACAATCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACT
517 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT
* *
15977936 CCGTATGCTTAGA-TCAGGAATGAACTCCGTATGCCTAAGTCAACCCATGTAAA-GAGCGTGCGG
582 CCGTATGCTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACG-AAACGAGCGTGCGG
* * * * * * **
15977999 GCGCTCAACTGGCCAGAGGGGCGGGATGCGCAACCCAGGGATC-AGTCGAGTCCCTCTCTATGTG
645 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTG
* * * * **
15978063 CTACCGATCCTGCTGCTGTAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
709 CTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* ** * *
15978128 CCTAAGCCAACCGACG-AA--A-C-GA---GCGGGCGGGCTCTACATCGGCCAGAGAGACAGCAT
774 CCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
*
15978185 GCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
839 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
*
15978245 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * *
15978310 CTTGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACCTTTTGTGGTTCGGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * * *
15978375 TTAAAGTTTTTCGGAAGGTGTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* *
15978440 CATGCCCAAAAAAATTCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
196 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
15978505 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAACGCTCTTTAA
261 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
15978570 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACCAGCAC
326 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* ** * * *
15978635 CCATTGCACATCATGTGCGCACACCCCCCCAACCCCCCTGATCGTCGGAACCCCAATGTCGCCGG
391 CCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC-GATCGCCGGAACCCCAATGCCGCCGA
* *
15978700 TCAGGTTCTCCGACGATGCTCCGACGATGGTG-CCC--C--------A---GG---CAGCACATG
454 TCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* *
15978748 CCCGAGCCCAGCTTGTGCTGCTGCAACCCT--G---GGTCCGA---T---C------TG-A-T-C
519 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
** ** *
15978793 -----C-TAGACTGGGAATGAACTCCGTATGTGTAAGTCAACCCATAAAACGA--GTGGGTGGCG
584 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG-GGCG
* * ** * * **
15978850 CTCAGTCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATTAGGTCCCCTTTTGCGTGCTAA
648 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGC
* * *
15978915 CGATCCTGCTGTCGCAACCCTCGGTCCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTA
713 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
15978980 AGCCAACCGATGAAACGAGCGGGCGAGCGGGCGGGCGGGCTCTACACCGGCCAGAGAGACAGCAT
778 AGCCAACCGACGAAACGAGC--G-GA-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* ***
15979045 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTGTG
839 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
* * *
15979105 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACGATGGTCCCTTAAGACTTCACATGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * *
15979170 CTTGGCAAGACGACTCGTTTTCTATTTTTCACAAATTTTGAAACTTTTTGTGGTTCGGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* *
15979235 TAAAATTTTTTCGGAAGGAGTTTTGGCCCGAAACTTGGTAGACGTGATCCCTGTATTTTTGTTGG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * * *
15979300 CATGCACAAAAAAATTCAGTTAAAAACCCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAATT
196 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
15979365 ATCCCTATTTCAGACACTTTAATGGCTACTGTCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
261 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * *
15979430 GGGGGTGTGAGTTCTCGAGGTTTGATGATGGATAGGGGGCCGATATAAGGGCCATGTACCAGCAC
326 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * * ** ** * *
15979495 CCATTGCACATTATGTGCACACACCCCCCGGCCATCCCGATCTCCAAAACCATAATGCCGTCGGT
391 CCATCGCACATCATGTGCGCACACCCCCCGGCC-CCCCGATCGCCGGAACCCCAATGCCGCCGAT
* * ** * * * *
15979560 CACGTTC-TCTGGCGATACTTTGGCGATGGTGCTCCGATGAAGAAAAATGCAGCACCAGCACATG
455 CAGGTTCTTC-GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* * * * * * *
15979624 TCCGAGCCTAGAATGTGCTGCCACAACCCTCGGTCCAGTCCAATCTTAGACTGGGAATAAACTCC
519 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
* * *
15979689 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGTGGGAGC
584 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * *
15979754 TCAGCCGGCTAGAGGGGTGGGATGCGCAAGCCGAGGATTGGTCGGCTCCCCCGCTGCGTGCTGCC
649 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCC
* * * * * * *
15979819 AATCCTACTGCCGTAACCCTCAGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGGATGCGTAA
714 GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* *
15979884 GCCAACCGACGAAACGAGGTGGCGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
779 GCCAACCGACGAAACGA----GCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* * *
15979949 TGCAAGCTGTGGATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTACA
840 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
* *
15980008 TGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* *
15980073 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTGGAAAC-TTTT-CTGGTTTGGGATTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC-GGTTCGGGATTTT
* * * *
15980136 TTAAAATTTTTTGGGAAGGAGTTTTGGCCCTAAACTTGGTAGACGTGATCTTTGTATTTTTTTTT
130 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTT
* *
15980201 GGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTATAAGATTTTGTGACCATTTGAAAAAA
194 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * *
15980266 GTGTCCCCATTTCAAACACTTTAATGCCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTT
259 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * * *
15980331 AAGGGGGTGTGAGCTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACTAGC
324 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
15980396 ACCCATCGCACATCATGTGCACACACCCCCTCGGCCGCCCGATCACCGGAACCCCAATGCTGTCG
389 ACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCGATCGCCGGAACCCCAATGCCGCCG
* * * ** * *
15980461 GTCAGGTTCTCCGACGATGCTCCGGTGATGGTCCCCCGACGAAGAAAAATGCGGCACCAACACAT
453 ATCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
* * * * * *
15980526 GCCC-ATG-CCAACATGTGCTGCCGCAACCCT-GAATCCGGTCTGATCTGACACTGGGAATCAAC
518 GCCCGA-GCCCAGCATGTGCTGCCGCAACCCTCG-GTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * *
15980588 TCCATATGCTTAGACTGGAAATGAACTCCGTATGCCTAAGTCAACCCACCAAATGATG-GTGCGG
581 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA-GCGTGCGG
* * * * * * * * * * * *
15980652 GCGCTCTGTCGGCAAG-GGGGTGAGATACGCAAGCCGAGGATCGACCGGGTCCCCTTTTACATGC
645 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
* *
15980716 TGCCGATCCTGCTGCTGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
710 TGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * *
15980781 CCAAGCCAACCGACGAAACGAGCAGGA-GGGCTGGCGGGCATTACGCCGGCCAGAGAGACGGGAT
775 CTAAGCCAACCGACGAAACGAGC-GGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * * *
15980845 GTGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTCCATATTTCTGCA
839 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
* *
15980905 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGACCTTTAAGCCTTCACGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * * *
15980970 CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTGTCGAAACTTTTTACGGTTCGGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * *
15981035 TTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTACTTTTGTTGG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
*
15981100 CATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
196 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
15981165 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
261 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
15981230 -GGGGTGTGAGTTCT-GTAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
326 GGGGGTGTGAGTTCTCG-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * ** *
15981293 CCCATCACACATCATGTGCGCACACCCCCCGGCCTCCCTGATCGCCAGAACCCCAACACCGCCGG
390 CCCATCGCACATCATGTGCGCACACCCCCCGGCC-CCCCGATCGCCGGAACCCCAATGCCGCCGA
* * * *
15981358 CCAGGTTCTTTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCTGCACCGGCACATG
454 TCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* * *
15981423 CCCGAGCCCAGCATGGGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCT
519 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
* * ** * *
15981488 ATATG-TTAAGACTGGGAATGAACACCGTATGCCTAAGTCAACCCATAAAACGAGCGTGCCGGCA
584 GTATGCTT-AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * **
15981552 CTCAGTCGGCCAGAGGGGCAGGATGCG-AAGCCGGGGATCGATCGGGTCCCCCTTTGTGTGCTAT
648 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGC
* * * * * *
15981616 CGATCTTGCTGTCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTA
713 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * ** *
15981681 AGCCAACTGACGAAACAAGCGGGCGGGCGAACGGGCACTACGCCAGCCAGAGAGACGGGATGCG-
778 AGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * *
15981745 ATAGCTGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
843 A-AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
*
15981802 TGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* *
15981867 CATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
66 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
*
15981932 CAAAAATTTTTTAC--AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
131 -TAAAATTTTTT-CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * * *
15981995 GGCATGCACAAAACAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGTCCATTAG-AAAAA
194 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
*
15982059 GTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
259 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
15982124 AAGGGGGTGTGAGTTCTCAAGGTTTGATCAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
324 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
15982189 ACCCATCACACATCATGTGCGCAAACCCCCTTGGCCCCCCGATCGCCGGAACCCCAATGCCGCCG
389 ACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCGATCGCCGGAACCCCAATGCCGCCG
* * ** *
15982254 ATCAAGTTCTTCGGCGA---T--G--G-T-ATG--CCGGTGAAGAAAAATACGGCACCAGCACAT
453 ATCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
*
15982308 GCCCGAGCCCAGCATGTGCTGTCGCAA-CC-C--T-C-G---G----T---CT----A-G---TC
518 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
* * * *
15982349 CG-AT-CTTAGACTGGGAATGAACTCCGTATGTCTAAGTCAACCAATGAAACGAGCGCGCGGGCG
583 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * * *
15982412 CTCAGTCGACCAAAGGGGCAGGATGCGTAAGCCGAGGATC-AGTCGGGTCCCCCTTCTGCGTGCT
648 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCC-TCTGCGTGCT
* * * * * *
15982476 ACCGATCCTACTACCGCAACCCTCAG-CCTGGTCTGATCTTAGACTGGGAATGAACTCTGTACGC
711 GCCGATCCTGCTGCCGCAACCCTCGGTCC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * *
15982540 CTAAGCCAACCGATGAAACGAGCGGATGGGTGGACGGGCGAGCACTACGCCAGCCAGAGAGACGG
775 CTAAGCCAACCGACGAAACGAGCGGA--CG-GG-CGGGCGGGCACTACGCCGGCCAGAGAGACGG
15982605 GATGCGCAAGC
836 GATGCGCAAGC
15982616 TATGGATCTT
Statistics
Matches: 9248, Mismatches: 1096, Indels: 590
0.85 0.10 0.05
Matches are distributed among these distances:
847 4 0.00
848 123 0.01
849 39 0.00
850 2 0.00
851 1 0.00
852 1 0.00
855 1 0.00
856 3 0.00
857 1 0.00
858 3 0.00
859 49 0.01
860 552 0.06
861 27 0.00
862 84 0.01
864 2 0.00
865 39 0.00
866 41 0.00
867 9 0.00
868 52 0.01
869 44 0.00
870 223 0.02
871 34 0.00
872 182 0.02
873 8 0.00
874 1 0.00
875 36 0.00
876 33 0.00
877 2 0.00
878 4 0.00
879 39 0.00
880 192 0.02
881 20 0.00
882 4 0.00
884 2 0.00
885 4 0.00
886 53 0.01
887 2 0.00
888 6 0.00
889 215 0.02
890 711 0.08
891 649 0.07
892 86 0.01
893 197 0.02
894 461 0.05
895 9 0.00
896 257 0.03
897 1263 0.14
898 211 0.02
899 162 0.02
900 417 0.05
901 324 0.04
902 717 0.08
903 861 0.09
904 110 0.01
905 67 0.01
906 141 0.02
907 174 0.02
908 53 0.01
909 20 0.00
910 7 0.00
911 1 0.00
912 2 0.00
913 1 0.00
914 2 0.00
916 1 0.00
917 3 0.00
918 2 0.00
919 156 0.02
920 46 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGATC
AGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGA
TCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
CAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
Found at i:15979704 original size:26 final size:26
Alignment explanation
Indices: 15979668--15979720 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15979658 CCAGTCCAAT
15979668 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
15979694 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
15979720 C
1 C
15979721 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:15982652 original size:26 final size:26
Alignment explanation
Indices: 15982623--15982675 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15982613 AGCTATGGAT
15982623 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15982649 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15982675 C
1 C
15982676 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15983556 original size:26 final size:26
Alignment explanation
Indices: 15983518--15983570 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15983508 CTGGTTCGAT
*
15983518 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15983544 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15983570 C
1 C
15983571 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15985832 original size:26 final size:26
Alignment explanation
Indices: 15985792--15985841 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
15985782 ATCCGATCTT
* *
15985792 AGACTGGGAATGAACTCTGTATGCTG
1 AGACTGGGAACGAACTCCGTATGCTG
15985818 AGACTGGGAACGAACTCCGTATGC
1 AGACTGGGAACGAACTCCGTATGC
15985842 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.28, C:0.20, G:0.30, T:0.22
Consensus pattern (26 bp):
AGACTGGGAACGAACTCCGTATGCTG
Found at i:15988447 original size:26 final size:26
Alignment explanation
Indices: 15988418--15988470 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15988408 CCGGTCTAAT
15988418 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15988444 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15988470 C
1 C
15988471 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15989336 original size:26 final size:26
Alignment explanation
Indices: 15989285--15989337 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15989275 CCGGTCCGAT
* *
15989285 CTTAGACTGAGAATGAACTTCGTATG
1 CTTAGACTGAGAATGAACTCCATATG
*
15989311 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGAGAATGAACTCCATATG
15989337 C
1 C
15989338 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCATATG
Found at i:15992664 original size:858 final size:866
Alignment explanation
Indices: 15991353--15998157 Score: 7426
Period size: 858 Copynumber: 7.7 Consensus size: 866
15991343 TAGGGGCGTA
*
15991353 TAGGT-GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC-GTTTTATGGCTTGTAAATTC
1 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
15991416 ATACAATTGGTCCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTT
66 ATACAA-TGGTCCC-TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
** *
15991481 CACGATTTTTGAAACTTTTTACGGTGT-GGGATTTTTTAAAATTTTTTCAGAAGTATTTTTGGCC
129 CACGATTTTCAAAACTTTTTGCGGT-TCGGGATTTTTTAAAATTTTTTC-G-AG---TTTTGGCC
15991545 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
188 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
15991610 CGATGTGTACAAGATTTTGTGACTATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
253 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * *
15991674 CTGGCAGCAAACATGTAAAA-CTCAAATGCTCTTTAAGGGGGAGTGAGTTCTTGAGGTTTGATGA
318 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* *
15991738 GGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCC
383 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCC
* * *
15991803 CCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCTGTGATGCTCCGGCGAT
446 CCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCTGCGATGCTCCGACGAT
* * * * * *
15991868 GGTGCCCTGGCAAAGGAAAATGCGTCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGTAACC
511 GGTGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACC
* * * *
15991933 CTCAGTCTGGTCCGATCTTAGATTGGGAATGAACTTCATATGCTTAGACT-GG-G-A-TCCGTAT
576 CTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAGAACTCCGTAT
* * * ** *
15991994 GCCTAAGTTAACCGACGAAACGAG-GTTCGGGCACTCAGCCGGCTAGAGGGGCGAGATGCGCAAG
641 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAG
** ** * * *
15992058 CCGGGGATCGGTCGGGTCCCCCTCTTTGTGCTACCGATCCGGCTGCTGCAACCCTCGATCTGGTC
706 CCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTC
* *
15992123 CAATCATAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCACT
771 CAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCACT
15992188 ACGTCGGCCAGAGAGA-AT-CGATAGTGTGG
836 ACGTCGGCCAGAGAGAGATGCGATAGTGTGG
*
15992217 TAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
1 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
15992282 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
66 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
*
15992347 CGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCG-GTTTTGGCCCCAAACTT
131 CGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAGTTTTGGCCCCAAACTT
* * *
15992411 GGTAGACGTGACCCTTGTATTTTTGTTGCCATGCACAAAAAAATTCAGCTAAAAAGTCGAAGTGT
196 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
15992476 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
261 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
15992541 AAACCTTTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCTAGGTTTGATGAGGGATAGG
326 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * * **
15992606 GGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCATATCATGTGTGTGCACCCCCCGGCCCCA
391 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-
* * * * * * * * *
15992671 TCGATCGCCAGAACCCAAATGTCACCGGTCAAGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCG
455 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCTGCGATGCTCCGACGATGGTGCCCCG
* * * * * * *
15992736 ACCAA-AAAAATGTGGCACTAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCG
520 GCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCG
* *
15992800 GTCTGATCTTAGACTGGGAATGAACTCCGTACT-CTTAGACTGGGAATGAACTCCGTATGCCTAA
585 GTCCGATCTTAGACTGGGAATGAACTTCGTA-TGCTTAGACTGGG-A-GAACTCCGTATGCCTAA
* * * * * *
15992864 GTCAACCCACAAAACAAGCGTGCGGGTGCTCAGTCGGCTAGAGGGGCGGGATGCGCAAGCCGAGG
647 GTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGG
* * * * * *
15992929 ATCGCCCAGGTCACCCTCTGCGTGCTGCC-AGTCTTGCTACCACAACCCTCGATAC-GGTCCAAT
712 ATCGACCGGGTCCCCCTCTGCGTGCTGCCGA-TCCTGCTGCCGCAACCCTCGAT-CTGGTCCAAT
* * ** **
15992992 CTTAGATTGGGAATGAACT-CGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGGCGGGTGGG
775 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-ACTACG
* * * ** * * *
15993056 TGGGCTC---CA-CG-T-CGGCCAGAGAGA
839 TCGGC-CAGAGAGAGATGC-GATAGTGTGG
* * * * ** * ** * * ** **
15993080 CAGGATGCG--TAAG-TCATGGTCGATA----TG-GTGGTAGGTGGC---TTTA-GGC--ACATC
1 TAGG-TGGGTTTAGGCACATCTTC-ATATTTCTGCATGCCA-ATGCCATTTTTATGGCTTGTAAA
* * *
15993131 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCTTGGCAAGACAACTCGTTTTCTATTTT
63 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* ** *
15993196 TCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC
128 TCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTT----CGAGTTTTGGCC
* * * *
15993261 CCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCCAAAATCT
188 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * * *
15993326 CGAATTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTTAGACACTTTAATGGCTA
253 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
*
15993391 CTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
318 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* * *
15993456 GGGATAGAGGGCCAATATAAGGGTCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCC
383 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * * * * *
15993521 CGGCCCCTTCGATCTTCGGAACCCCAATGCCACCGGTTAGGTTCTCCGGCGATGCTCTGGCGATG
448 CGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCTGCGATGCTCCGACGATG
* * * * * ** *
15993586 GTGCCTCGGTGAAGAAAAATACGGCACCAGCACATGACCGAGCCCAGCATGTGC-AACGCAACCC
512 GTGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCC
* * *
15993650 TCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
577 TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGG-A-GAACTCCGTA
* * * *
15993715 TGCCTAAGTCAACCCACAAAATGAGCGTGCGGGTGCTCAGCAGGCCAGAGGGGC-AGGAT--GCT
640 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGA-GATGCGCA
* *
15993777 A-CC----A---A-----------TCT---TGCT----A-----C--CC-CAACCCTCGGTCCGG
704 AGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGG
* * * * *
15993808 TCTAATCTAAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGATGAAAAGAGCGCGTGGGTG
769 TCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA--GC------G
* *
15993873 GGCGGGCAC-ATGTCGGCCAGAAAGACGGGATGCGCAAGCCGTGGATGGATAGAGTGG
826 GGCGGGCACTACGTCGGCCAG--AGA-GAGATGCG--A----T--A--G-T---GTGG
* *** *
15993930 CAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGGTTGTAAATTC
1 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
15993995 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTGCTGTTTTTC
66 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT-CTATTTTTC
** * * *
15994060 ACGATTTTTGAAACTTTTTGGGGTTCGAGATTTTTTAAAATCTTTTTTGGAAGGAATTTTGGCCC
130 ACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAA--TTTTTTCG-A-G--TTTTGGCCC
* * *
15994125 CAAACTTGGTAGACGTGATCCCTGTATTGTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTC
189 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * * * *
15994190 AAAGTGTACAAGATTTTGTGTCCAGTTGAAAAAAGTGTGCCCATTTCAAACACTTTAATGGCTAC
254 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
15994255 TGGCAG-AAACCAGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
319 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * * * *
15994319 GGATAGGGGGTCAATATAAGGGCCAAGTACCAGCACCCATCACACATAATGTGCGTAGAACCCCC
384 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-CA-CCCC
* * *
15994384 CCGGGCCCCCCGACCCCCCAATTGTCGGAACCCAAATGCCGCCAGTCAGGTTCTCC-GACGATGC
447 CC-GGCCCCCCG--------ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCTG-CGATGC
*
15994448 TCCGA-GATGGTGCCCCGCCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT
502 TCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT
* * * * * *
15994512 GTCGCAACCCTCGGGCCGATCCGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAAT
567 GCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGG-A-
* * * *
15994577 GAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCGGGTGCTCAGCCGACCAGAGGGGTG
630 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCG
* * * * * *
15994642 GGATGCGCAAGCCTGGAATCGACCGGGTCCCCCTCTGTGTGCTGCCAATCCTGCTGTCGCAACCC
695 AGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCC
* ** * *
15994707 TCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAACAAGT
760 TCGATCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A-AA--
*
15994772 GGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
820 ---C--G-A-GCGGGCGGGCACTACGTCGGCCAGAGAGA---GATGCG--A----T--A--G-T-
15994837 GGGTGG
863 --GTGG
* * * *
15994843 TAGGTGGGTTTAGGCACAGCTTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAAATT
1 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGT-AAATT
15994908 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
65 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* *
15994973 ACGATTTTCAAAACTTTTTGCAGTTCTGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCC
130 ACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-G-A-G--TTTTGGCCCC
* * * *
15995038 AAACTTGGGAGACGTGATTCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAAATCG
190 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
*
15995103 AAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
255 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
15995168 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
320 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
*
15995233 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCT
385 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCC
* ** * **
15995298 GGCCCCCCGATCGTCGGAACCCCAATCCCATCGGTCAGGTTCT-CTGGCGATGCTCTGACGACAG
449 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCT-GCGATGCTCCGACGATGG
* * * *
15995362 TGCCCTGGTGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGAATGTGCTGCCGTAACCCT
513 TGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCT
* * * * * * *
15995427 CGATCCGATCCGATCTTAGACTAGGAATGAAC-TCCTATGCTTA-ACTGGAATGAACTTCGTATA
578 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGA-GAACTCCGTATG
* * * * * * * *
15995490 CCCAAGTCAACCCGCGAAACGAACGTACGGGTGCTCAGTCGGCCAGAGGGGCAAGATGTGCAAAC
642 CCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGC
* * * * * * *
15995555 CGGGGATCGACCGGGTCCCCCTTTGCATACTGTCGATCCTACTACCGCAACCCTCGATCTGGTTC
707 CGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTCC
*
15995620 AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCAGGC
772 AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC--G--GGC
* *
15995685 ACTACCTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGA
833 ACTACGTCGGCCAGAGAGA---GATGCG--A----T--A--G-T---GTGG
* * *
15995736 TAGGTGGGTTTAGGTACATCTTCATATTTCTGCGTGCCAATGCCATTATTATGGCTTGTAAATTC
1 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
15995801 ATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
66 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * ** *
15995866 CGATTTTCAAAACTTTTTACTGTTCTAGATTTTTAAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
131 CGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-----GAGTTTTGGCCCCA
* * * * *
15995931 AACTTGGTAGACGTGATTCTTGTATTTTTGTTGGCTTGCACAAAACAATTCAGCTAAAAAATCAA
191 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* *
15995996 AATGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
256 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * *
15996061 GCAGCAAATCTGTAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
321 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
*
15996126 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTTCGCACACCCCCCCT
386 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-
* * *
15996191 GGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT-CTGGCGATGCTCCGACGACGG
449 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCT-GCGATGCTCCGACGATGG
* ** * * *
15996255 TGCCCGGGCGAAGAAAAATGCAACACCAACACATGCTCGAGCCCAGAATGTGCCG-CGTAACCCT
513 TGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCT
* * * * **
15996319 TGGTCTGATCTGATCTTAGACTATGAATGAAC-TCGTATGCTTAGACTGGGAATGAACTCCGTAT
578 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGG-A-GAACTCCGTAT
* * * *
15996383 GCCCAAGTCAACCCACGAAACGAACGTGCAGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
641 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAG
* * * * * * * * * *
15996448 CCAGGGATCGACCGGGTCCCCTTTTGCATACTGCCAATCCTGCTGCTGCAACCCTTGGTCTGGTT
706 CCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTC
** * *
15996513 TGATCTTAGACTGGGAATGAACTCCATATTCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
771 CAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA------------G
* *
15996578 CGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
824 CGGGCGGGCACTACGTCGGCCAGAGAGA---GATGCG--A----T--A--G-T---GTGG
* * * * * *
15996638 TAGGTGGGTTTAGGTACATCTTTATATTTCTACGTGCCAATGCCATTATTATGGCTTATAAATTC
1 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * *
15996703 ATACAATTGTCCCTTAAGTCTCCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
66 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* *
15996768 CGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTCAAATTTTTTCAGAAGGAGTTTTGGCCCCA
131 CGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-----GAGTTTTGGCCCCA
* * *
15996833 AACTTGGTAAACGTGATCCTTGTATTTTTGCTGGCATGCAC-AAAAAATTCAGGTAAAAACTCGA
191 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* * *
15996897 AGTGGACAAGATTTTGTGACAATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGGCTACTG
256 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
15996962 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
321 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
15997027 ATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCTG
386 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCG
* * *
15997092 GCCCCCCGATCGTTGGAACCCCAAT-CTCGTCGGTCAGGTTCT-CTGGCGATGCTCCGACGACGG
450 GCCCCCCGATCGTCGGAACCCCAATGC-CGCCGGTCAGGTTCTCCT-GCGATGCTCCGACGATGG
* * * *
15997155 TGGCCCGGCGAAGAAAAATACGGCACCAACACATGCCCAAGCCCAGAATGTGCTGCCGTAACCCT
513 TGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCT
* * * * **
15997220 CGGTCCGATCCGATCTTAGACTAGGAATGAAC-TCCTATGCTTA-ACTGGAATGAACTTTGTATG
578 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGA-GAACTCCGTATG
* * * * *
15997283 CCCAAGTCAACCCGCGAAACGAACGTGCGGGTGCTCAGCCGGCCAGATGGGGCAAGATGTGCAAG
642 CCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGA-GGGGCGAGATGCGCAAG
* * * * * *
15997348 CCGGGGATCGACCGGGTCCCCCTCTGCATACTGCCGATCCTACTACCACAACCCTC-AGTATGGT
706 CCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGA-TCTGGT
*** * *
15997412 TTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAATCGAGCGGGCAGGCAG
770 CCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G--GGC-G
*
15997477 ATGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
830 --G-GCACTACGTCGGCCAGAGAGA---GATGCG--A----T--A--G-T---GTGG
* *
15997534 TAGGTGGGTTAAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
1 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * *
15997599 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCATGATGACTCATTTTCTATTTTTCA
66 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* ** * * *
15997664 TGATTTTCAAAACTTTTT-TAGTTCGGGATTTTTTAAGATTTTTTTGGAAGGAGTTTTGCCCCCA
131 CGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAA-AATTTTTT----CGAGTTTTGGCCCCA
*
15997728 AACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
191 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
15997793 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
256 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
15997858 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
321 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
*
15997923 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCGCCCG
386 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCG
* * * * * *
15997988 ACCCCCCCGATCG-CGAGAACCCCAATGCTGTCGGTCAGGTTCTCCGGCGATGCACCGATGATGG
450 -GCCCCCCGATCGTCG-GAACCCCAATGCCGCCGGTCAGGTTCTCCTGCGATGCTCCGACGATGG
* *** * * **
15998052 TGCCCCGACGAAGAAAAAAATGGCACCACCACATGCCCGAGCCCAGCATGTGCTACCAAAACCCT
513 TGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCT
* * * * *
15998117 CGGTACGGTCTGATCTTATACTAGGAATGAACTCCGTATGC
578 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGC
15998158 CCAAGCAATC
Statistics
Matches: 5180, Mismatches: 555, Indels: 378
0.85 0.09 0.06
Matches are distributed among these distances:
821 1 0.00
822 34 0.01
823 27 0.01
825 3 0.00
828 1 0.00
829 5 0.00
831 8 0.00
833 1 0.00
834 4 0.00
835 1 0.00
836 2 0.00
837 4 0.00
844 1 0.00
846 1 0.00
849 3 0.00
850 6 0.00
851 7 0.00
852 106 0.02
853 6 0.00
854 3 0.00
855 10 0.00
856 7 0.00
857 5 0.00
858 638 0.12
859 153 0.03
860 97 0.02
861 63 0.01
862 160 0.03
863 149 0.03
864 171 0.03
865 160 0.03
866 27 0.01
871 53 0.01
872 157 0.03
874 3 0.00
875 2 0.00
879 1 0.00
882 1 0.00
888 2 0.00
889 6 0.00
890 2 0.00
891 1 0.00
892 419 0.08
893 223 0.04
894 172 0.03
895 70 0.01
896 408 0.08
897 133 0.03
898 10 0.00
899 59 0.01
900 230 0.04
901 403 0.08
902 274 0.05
903 46 0.01
904 92 0.02
905 1 0.00
906 6 0.00
907 1 0.00
908 58 0.01
910 2 0.00
911 22 0.00
912 152 0.03
913 242 0.05
914 61 0.01
918 3 0.00
919 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (866 bp):
TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
CGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAGTTTTGGCCCCAAACTT
GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCTGCGATGCTCCGACGATGGTGCCCCGG
CGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGG
TCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAGAACTCCGTATGCCTAAGTCA
ACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCG
ACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTCCAATCTTAGA
CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCACTACGTCGGCCA
GAGAGAGATGCGATAGTGTGG
Found at i:15992835 original size:26 final size:26
Alignment explanation
Indices: 15992806--15992856 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
15992796 TCCGGTCTGA
15992806 TCTTAGACTGGGAATGAACTCCGTAC
1 TCTTAGACTGGGAATGAACTCCGTAC
15992832 TCTTAGACTGGGAATGAACTCCGTA
1 TCTTAGACTGGGAATGAACTCCGTA
15992857 TGCCTAAGTC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (26 bp):
TCTTAGACTGGGAATGAACTCCGTAC
Found at i:15993701 original size:26 final size:26
Alignment explanation
Indices: 15993665--15993717 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15993655 CTGGTCTGAT
15993665 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15993691 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15993717 C
1 C
15993718 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15994566 original size:26 final size:26
Alignment explanation
Indices: 15994537--15994589 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15994527 CCGATCCGAT
15994537 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
*
15994563 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
15994589 C
1 C
15994590 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:15996371 original size:25 final size:26
Alignment explanation
Indices: 15996333--15996384 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
15996323 CTGATCTGAT
*
15996333 CTTAGACTATGAATGAACT-CGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15996358 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15996384 C
1 C
15996385 CCAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 17 0.71
26 7 0.29
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15997820 original size:896 final size:898
Alignment explanation
Indices: 15993778--15998157 Score: 6237
Period size: 892 Copynumber: 4.9 Consensus size: 898
15993768 CAGGATGCTA
* * * * * * * *
15993778 CCAATCTTGCTACCCCAACCCTCGGTCCGGTCTAATCTAAGACTGGGAATGAACTCCGTATGCCT
1 CCAATCCTACTACCGCAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCT
* * * * ** * * * * *
15993843 AAGCCAATCGATGAAAAGAGCGCGTGGGTGGGCGGGCAC-ATGTCGGCCAGAAAGACGGGATGCG
66 AAGCCAACCGACGAAACGAGCGGGCAGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * * **
15993907 CAAGCCGTGGATGGATAGAGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATG
131 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
*
15993972 CCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
196 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* ** ** *
15994037 GACGACTCGTTTTGCTGTTTTTCACGATTTTTGAAACTTTTTGGGGTTCGAGATTTTTTAAAATC
261 GACGACTCGTTTT-CTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGGGATTTTTTAAAAT-
* * * *
15994102 TTTTTTGGAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTGTTGTTGGCATGCA
324 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * * * *
15994167 TAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGTCCAGTTGAAAAAAGTGTGCCC
389 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* *
15994232 ATTTCAAACACTTTAATGGCTACTGGCAG-AAACCAGTAAAATCTCAAATGCTCTTTAAGGGGGT
454 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
15994296 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGTCAATATAAGGGCCAAGTACCAGCACCCATCA
519 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * * * *
15994361 CACATAATGTGCGTAGAACCCCCCCGGGCCCCCCGACCCCCCAATTGTCGGAACCCAAATGCCGC
584 CACATCATGTGCGCA-CA-CCACCCTGGCCCCCCG--------ATCGTCGGAACCCCAATGCCGT
* * * * * *
15994426 CAGTCAGGTTCTCCGACGATGCTCCGA-GATGGTGCCCCGCCGAAGAAAAATGCGGCACCAACAC
639 CGGTCAGGTTCTCTGGCGATGCTCCGACGACGGTGGCCCGGCGAAGAAAAATGCGGCACCAACAC
* * * * *
15994490 ATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGGCCGATCCGATCTTAGACTGGGAATGAAC
704 ATGCCCGAGCCCAGAATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAAC
* * * * *
15994555 TCCGCATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCGGG
769 TCC-TATGCTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCACGAAACGAACGTGCGGG
* *** * * ** *
15994620 TGCTCAGCCGACCAGAGGGGTGGGATGCGCAAGCCTGGAATCGACCGGGTCCCCCTCTGTGTGCT
833 TGCTCAGCCGGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATACT
15994685 G
898 G
* ** *
15994686 CCAATCCTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCT
1 CCAATCCTACTACCGCAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCT
* * *
15994751 AAGCCAACCGATGAAACAAGTGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
66 AAGCCAACCGACGAAAC----GAGCGGGCAGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGA
* * *
15994816 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTTATATTTCTACGTGCC
127 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
15994881 AATGCCATTTTTATGGCTTGTAAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
192 AATGCCATTTTTATGGCTTGT-AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* *
15994946 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCAGTTCTGGATTTTTTAA
256 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGGGATTTTTTAA
* * *
15995011 AATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGGAGACGTGATTCTTGTATTTTTGTTGGCAT
321 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
15995076 GCACAAAACAATTCAGCTAAAAAATCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTC
386 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
15995141 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
451 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
15995206 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
516 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* *
15995271 TCGCACATCATGTGCGCACACCACCCTGGCCCCCCGATCGTCGGAACCCCAATCCCATCGGTCAG
581 TCGCACATCATGTGCGCACACCACCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAG
* * * *
15995336 GTTCTCTGGCGATGCTCTGACGACAGT-GCCCTGGTGAAGAAAAATGTGGCACCAACACATGCCC
646 GTTCTCTGGCGATGCTCCGACGACGGTGGCCC-GGCGAAGAAAAATGCGGCACCAACACATGCCC
*
15995400 GAGCCCAGAATGTGCTGCCGTAACCCTCGATCCGATCCGATCTTAGACTAGGAATGAACTCCTAT
710 GAGCCCAGAATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCTAT
* * * *
15995465 GCTTA-ACT-GGAATGAACTTCGTATACCCAAGTCAACCCGCGAAACGAACGTACGGGTGCTCAG
775 GCTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCACGAAACGAACGTGCGGGTGCTCAG
* * * *
15995528 TCGGCCAGAGGGGCAAGATGTGCAAACCGGGGATCGACCGGGTCCCCCTTTGCATACTG
840 CCGGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATACTG
* * * ** *
15995587 TCGATCCTACTACCGCAACCCTCGATCTGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCT
1 CCAATCCTACTACCGCAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCT
* *
15995652 AAGCCAACCGACGAAACAAGCGGGC--G-GG-CAGGCACTAC-CTCGGCCAGAGAGACGGGATGC
66 AAGCCAACCGACGAAACGAGCGGGCAGGCGGACGGGCACTACGC-CGGCCAGAGAGACGGGATGC
* * *
15995712 GCAAGCTGTGGATCGATAGGGTGATAGGTGGGTTTAGGTACATCTTCATATTTCTGCGTGCCAAT
130 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
* *
15995777 GCCATTATTATGGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
195 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* ** *
15995842 AGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACT-GTTCTAGATTTTTAAAAAT
260 AGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTT-GTAGTTCGGGATTTTTTAAAAT
* *
15995906 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATTCTTGTATTTTTGTTGGCTTGCA
324 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * * * *
15995971 CAAAACAATTCAGCTAAAAAATCAAAATGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
389 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* *
15996036 ATTTCAGACACTTTAATGGCTACTGGCAGCAAATCTGTAAAATCTCAAATGCTCTTTGAGGGGGT
454 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
15996101 GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
519 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * *
15996166 CACATCATGTTCGCACACCCCCCCTGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGT
584 CACATCATGTGCGCACA-CCACCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGT
** *
15996231 TCTCTGGCGATGCTCCGACGACGGT-GCCCGGGCGAAGAAAAATGCAACACCAACACATGCTCGA
648 TCTCTGGCGATGCTCCGACGACGGTGGCCC-GGCGAAGAAAAATGCGGCACCAACACATGCCCGA
* * * * * *
15996295 GCCCAGAATGTGCCG-CGTAACCCTTGGTCTGATCTGATCTTAGACTATGAATGAACTCGTATGC
712 GCCCAGAATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCTATGC
*
15996359 TTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCACGAAACGAACGTGCAGGTGCTCAGCC
777 TTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCACGAAACGAACGTGCGGGTGCTCAGCC
** * * *
15996424 GGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGACCGGGTCCCCTTTTGCATACTG
842 GGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATACTG
* * * * *
15996481 CCAATCCTGCTGCTGCAACCCTTGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATTCCT
1 CCAATCCTACTACCGCAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCT
* * *
15996546 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGA
66 AAGCCAACCGACGAAACGA----GCGGGCAGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGA
* * *
15996611 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTTATATTTCTACGTGCC
127 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
* * * * *
15996676 AATGCCATTATTATGGCTTATAAATTCATACAATTGTCCCTTAAGTCTCCACGTGAAGTTTCATG
192 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* *
15996741 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTCAA
257 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGGGATTTTTTAAA
* * *
15996806 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTATTTTTGCTGGCATG
322 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * * *
15996871 CAC-AAAAAATTCAGGTAAAAACTCGAAGTGGACAAGATTTTGTGACAATTTGAAAAAATTGTCC
387 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
15996935 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
452 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
15997000 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCAT
517 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
*
15997065 CGCACATCATGTGCGCACACCACCCTGGCCCCCCGATCGTTGGAACCCCAAT-CTCGTCGGTCAG
582 CGCACATCATGTGCGCACACCACCCTGGCCCCCCGATCGTCGGAACCCCAATGC-CGTCGGTCAG
* *
15997129 GTTCTCTGGCGATGCTCCGACGACGGTGGCCCGGCGAAGAAAAATACGGCACCAACACATGCCCA
646 GTTCTCTGGCGATGCTCCGACGACGGTGGCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCG
15997194 AGCCCAGAATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCTATG
711 AGCCCAGAATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCTATG
** *
15997259 CTTA-ACT-GGAATGAACTTTGTATGCCCAAGTCAACCCGCGAAACGAACGTGCGGGTGCTCAGC
776 CTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCACGAAACGAACGTGCGGGTGCTCAGC
*
15997322 CGGCCAGATGGGGCAAGATGTGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATACTG
841 CGGCCAGA-GGGGCAAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATACTG
* * * * **
15997381 CCGATCCTACTACCACAACCCTCAGTATGGTTTGATCTTAGACTGGGAATGAACTCTGTATGCCT
1 CCAATCCTACTACCGCAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCT
* * * *
15997446 AAGCCAACCGACGAATCGAGCGGGCAGGCAGATGAGCACTACGCCGGCCAGAGAGACGGGATGCG
66 AAGCCAACCGACGAAACGAGCGGGCAGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * *
15997511 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTAAGGCACATCTTCATATTTTTGCATGCCAATG
131 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
*
15997576 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAT
196 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * *
15997641 GATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTT-TAGTTCGGGATTTTTTAAGATTT
261 GACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGGGATTTTTTAAAATTT
* * *
15997705 TTTTGGAAGGAGTTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACA
326 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
15997770 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
391 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
15997835 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
456 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
15997900 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
521 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
15997965 CATCATGTGCACACACC-CGCCCGACCCCCCCGATCG-CGAGAACCCCAATGCTGTCGGTCAGGT
586 CATCATGTGCGCACACCAC-CCTG-GCCCCCCGATCGTCG-GAACCCCAATGCCGTCGGTCAGGT
* * * * * * *** *
15998028 TCTCCGGCGATGCACCGATGATGGTGCCCCGACGAAGAAAAAAATGGCACCACCACATGCCCGAG
648 TCTCTGGCGATGCTCCGACGACGGTGGCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAG
* * ** * * * *
15998093 CCCAGCATGTGCTACCAAAACCCTCGGTACGGTCTGATCTTATACTAGGAATGAACTCCGTATGC
713 CCCAGAATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCC-TATGC
15998158 CCAAGCAATC
Statistics
Matches: 3135, Mismatches: 303, Indels: 78
0.89 0.09 0.02
Matches are distributed among these distances:
892 420 0.13
893 221 0.07
894 176 0.06
895 80 0.03
896 406 0.13
897 144 0.05
898 12 0.00
899 61 0.02
900 230 0.07
901 414 0.13
902 272 0.09
903 51 0.02
904 89 0.03
908 72 0.02
911 14 0.00
912 162 0.05
913 250 0.08
914 61 0.02
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (898 bp):
CCAATCCTACTACCGCAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCT
AAGCCAACCGACGAAACGAGCGGGCAGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCG
CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
GACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGGGATTTTTTAAAATTT
TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
CATCATGTGCGCACACCACCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
CTGGCGATGCTCCGACGACGGTGGCCCGGCGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
AGAATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCTATGCTTAG
ACTGGGAATGAACTCCGTATGCCCAAGTCAACCCACGAAACGAACGTGCGGGTGCTCAGCCGGCC
AGAGGGGCAAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATACTG
Found at i:15998770 original size:713 final size:714
Alignment explanation
Indices: 15997390--15998888 Score: 2272
Period size: 713 Copynumber: 2.1 Consensus size: 714
15997380 GCCGATCCTA
* * * * *
15997390 CTACCACAACCCTCAGTATGGTTTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACC
1 CTACCACAACCCTCGGTACGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCCAACC
* * * * * *
15997455 GACGAATCGAGCGGGCAGGCAGATGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
66 GACGAAACAAGCGGGCAGGCAGACGAGCACTACACCGGCCAGAGAGACAGGATACGCAAGCCGTG
*
15997520 GATCGATAGGGTGGTAGGTGGGTTAAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTA
131 GATCGATAGGGTGGTAGGTGGGTTAAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * *
15997585 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCATGATGACTCA
196 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCA
* * * *
15997650 TTTTCTATTTTTCATGATTTTCAAAACTTTTTTAGTTCGGGATTTTTTAAGATTTTTTTGGAAGG
261 TTTTCTATTTTTCACGATTTTCAAAACTTTTTCAGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
15997715 AGTTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCA
326 AGTTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCA
15997780 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
391 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
15997845 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
456 TTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
15997910 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
521 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* *
15997975 ACACACCCGCCCGACCCCCCCGATCGCGAGAACCCCAATGCTGTCGGTCAGGTTCTCCGGCGATG
586 ACACACCCGCCCGACCCCCCAGATCGCGAGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATG
* *
15998040 CACCGATGATGGTGCCCCGACGAAGAAAAAAATGGCACCACCACATGCCCGAGCCCAGCATGTG
651 CACCGACGATGGTGCCCCGACGAAGAAAAAAATGGCACCAACACATGCCCGAGCCCAGCATGTG
* * * *
15998104 CTACCAAAACCCTCGGTACGGTCTGATCTTATACTAGGAATGAACTCCGTATGCCCAAG-CAATC
1 CTACCACAACCCTCGGTACGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCCAACC
* * * * * ***
15998168 GACGAAACAAGCGGGCGGGCGGGCGGGTACTACACCGGTTGGAGAGACAGGATACGCAAGCCGTG
66 GACGAAACAAGCGGGCAGGCAGACGAGCACTACACCGGCCAGAGAGACAGGATACGCAAGCCGTG
*
15998233 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
131 GATCGATAGGGTGGTAGGTGGGTTAAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
*
15998298 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCG
196 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCA
* * *
15998363 TTTTTTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
261 TTTTCTATTTTTCACGATTTTCAAAACTTTTT-CAGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * *
15998428 GAGTTTTTG-CCCCAAACTTGGTATACGTGATCCTTGTATTTTTTTTTGGCATGCACAAAACAAT
325 GAG-TTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTCTTGGCATGCACAAAAAAAT
*
15998492 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAC
388 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
15998557 ACTTTAATTGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCT
453 ACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
15998621 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCCAGCACCTATCGCACATGATG
518 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * *
15998686 TGCGCACACCC-CCTGGCCCCCCAGATCGCTG-GAACCCTAATG-TCGCCGGTCAGGTTCTCCGG
583 TGCACACACCCGCCCGACCCCCCAGATCGC-GAGAACCCCAATGCT-GCCGGTCAGGTTCTCCGG
* * * *** * *
15998748 TGATGCTCCGACGATTGTGCCCCGGTTAAGAAAAATATGGCACCAACACATGCCCGGGCCCAGCA
646 CGATGCACCGACGATGGTGCCCCGACGAAGAAAAAAATGGCACCAACACATGCCCGAGCCCAGCA
15998813 TGTG
711 TGTG
* ** * * * * * *
15998817 CTGCTGCAACCCTTGGTCCGGTCCGATCTTAGACTGGGATTGAACTCCGTATGCCTAAGTCAACC
1 CTACCACAACCCTCGGTACGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCCAACC
*
15998882 CACGAAA
66 GACGAAA
15998889 TGAGTGTGCG
Statistics
Matches: 705, Mismatches: 74, Indels: 12
0.89 0.09 0.02
Matches are distributed among these distances:
712 1 0.00
713 357 0.51
714 207 0.29
715 140 0.20
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.27
Consensus pattern (714 bp):
CTACCACAACCCTCGGTACGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCCAACC
GACGAAACAAGCGGGCAGGCAGACGAGCACTACACCGGCCAGAGAGACAGGATACGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTAAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCA
TTTTCTATTTTTCACGATTTTCAAAACTTTTTCAGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
AGTTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
ACACACCCGCCCGACCCCCCAGATCGCGAGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATG
CACCGACGATGGTGCCCCGACGAAGAAAAAAATGGCACCAACACATGCCCGAGCCCAGCATGTG
Found at i:16000651 original size:26 final size:26
Alignment explanation
Indices: 16000615--16000667 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16000605 GTTGACTTAG
16000615 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16000641 GCATACGGAGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16000667 G
1 G
16000668 ATTGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16001537 original size:26 final size:26
Alignment explanation
Indices: 16001507--16001559 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16001497 GTTGACTTAG
* * *
16001507 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGAAGTTCATTCCCACTCTAA
16001533 GCATACGAAGTTCATTCCCACTCTAA
1 GCATACGAAGTTCATTCCCACTCTAA
16001559 G
1 G
16001560 ATCGGATCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.26, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCACTCTAA
Found at i:16002340 original size:871 final size:863
Alignment explanation
Indices: 16000591--16009806 Score: 8416
Period size: 898 Copynumber: 10.4 Consensus size: 863
16000581 TCTGGAACGC
* *
16000591 CTCGTTTCGCTTGTGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTGAT
1 CTCGTTTCG--TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAGTTCAT
* * * *
16000656 TCCCAGTCTAAGATTGGATCGGACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGCCATGTGCTG
63 T-CCAGTCTAAGA-CGGA-C-G-CAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTG
** ** * * *
16000721 GTGCCGCATTTTTCTTCGTCGGGGTGCCATCGCCGGAGAACCTAACC-GACGGTATTAGGGTTCT
123 GTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAG--CATCACCGGA--G-A--A----CCT
* * *
16000785 AGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATTGGTGCTGGTACTTGGCCATTA
177 ---GA-C-------CAGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
*
16000850 TATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
231 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* * *
16000915 TACAGGTTTACTGGCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACC
296 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
*
16000980 AAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
361 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * *
16001045 ACATCTACCAAGTTTGGGACCAAAAATCCTTCCAAAAAAATTTTAAAAAATC-CCAAACCGCAAA
426 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAA-CGCAAA
* *
16001109 AAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTCCCATGAAACTTCACGTGAAGGCTT
490 AAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
** ** *
16001174 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATTTCATTGGCACACAGAAATATGATGATGT
555 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGT
* * * * ***
16001239 GCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCAACCCATCTCTCTGGTCAAAGTAG
620 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
* * * * *
16001304 TGACCGCCCGCCCGCCCGCCCGCTCATTTCGTCGGTTAGCTTAGGCATACGAAGTTCATTCCCAG
685 TGCCCGCCCGCCCG-CCGCCCACTCGTTTCGTCGATTGGCTTAGGCATACGAAGTTCATTCCCAG
* * * * ** * *
16001369 TCTAAGATCAGACCAGATTGAGGGTTGCAGTAGTAAAATCGGTAGCACGCAGAGGGGTACCTGAC
749 TCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACC-GAT
* * * **
16001434 CAATCCCCTGCTTGCGCATCCCGCCCCTTTGGCCGGCTGAGCGCCCGCGTG
813 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
* * *
16001485 CTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAAGCATACGAAGTTCATTC
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG-AGTTCATT-
* * *
16001550 CCACTCTAAGATCGGATCGGTCAGAGGGTTGCGGCAGCACATGCTGGCCTCAGGCATGTGCTGGT
64 CCAGTCTAAGA-CGGA-C-G-CAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
*** * * *
16001615 GCTTAATTTTTCTTC-CTTGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCA-GGGGGT
125 GCCGCATTTTTCTTCAC-CGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCAGGGGGGT
*
16001678 GTGCACTCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
189 GTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16001743 AACCTCCAGAACTCACACCCCCTTAAAGAGCATATGAGATTTTACAGGTTTGCTGCCAGTAGCCA
254 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16001808 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAACTTTTACACTTTGAGTTTT
319 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * * *
16001873 TAGCTGAATTTTTTTGTGCATGACAA-AAAAAAATCAAGGATCATGTCTACCAAGGTTGGGGCAA
384 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATA-CAAGGATCACGTCTACCAAGTTTGGGGCCA
* * * * *
16001937 AAACTCCTTCTGAAAAAATTTTAAAAAAATCTTGAAACACAAAAAGTTTCGAGAATCGTGAAAAA
448 AAACTCCTTCCGAAAAAATTTT-AAAAAATCTCGAAACGCAAAAAGTTTCAAAAATCGTGAAAAA
* *
16002002 TAGAAAACGAGTCGTCTTGCCATGAAACTTTACGTGAAGGCTTAAGGGAACATTGTATGAATTTA
512 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* ** * **
16002067 CAAGCCATAAAACTGGCATTGGCACACAGAAATATGAAGATGAGCCTAAATTCACCTACCACCCT
577 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * *
16002132 ATCGATCCACGGCTTGTGCATCCTGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCCCA
642 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CCGCCCA
* * * * * *
16002197 CTCGTTTCATCGATTGGCTTAGCCATACGAAGTTCATTCCTAGACTCAGATCAGACCAGACTAAG
706 CTCGTTTCGTCGATTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAG
** * * *
16002262 GGTTGCAACAGCAAGATCGGTGGCACGCAGAGGGGGACTCGATCGATCCCCGGCTTGTGCATCCC
771 GGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGAC-CGATCGATCCCCGGCTTGCGCATCCC
16002327 GCCCCTCTGGCCGGCTGAGCGCCCGCACG
835 GCCCCTCTGGCCGGCTGAGCGCCCGCACG
* * *
16002356 CTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCCAAG-AT-CG-G--------
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAGTTCATTCC
16002410 A--C-----CGGAC-C-GAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
66 AGTCTAAGACGGACGCAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
* * * ** * * *** *
16002466 TTTTTCTTCGCCGGAGAACC-T-GACCGGCAGCATTGGGGTTCTGGCAATAGAGGGGGCCGAGGG
131 TTTTTCTTCACCGGGGCACCATCG-CCGG-AGCA-T----CACCGG--AGA-ACCTGACC-AGGG
* * *
16002529 GGGTGTGCGCACATGATGTCCGATGGGTGTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
185 GGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
*
16002594 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTAACAGGTTTGCTGCCAGTA
250 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
* *
16002659 GCCATTAAAGTGTCTGAAATGGGGACA-TATATTTCAAATGGTCACAAAATCTTGTAGACTTCGA
315 GCCATTAAAGTGTCTGAAATGGGGACACT-TTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
* *
16002723 GTTTTTTA-CATGAATTTTTTAGTGCATGCCAAGAAAAATACAAGGATTCACGTCTAACCAAGTT
379 G-TTTTTAGC-TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGA-TCACGTCT-ACCAAGTT
* * **
16002787 TGGGGCCAAAAAACTCCTTCCAAGAAAAAATTATAAAAAATCTTG-AAC-CAACAAAGTTTTGAA
440 TGGGGCC--AAAACTCCTTCC--GAAAAAATTTTAAAAAATCTCGAAACGCAA-AAAGTTTCAAA
* *
16002850 AATCGTGAAAAAATAGAAAAGCGAGTCGTCTT-CCATGGAAC-TCAC-TGAAGGCCCCTTTAAAG
500 AATCGTG-AAAAATAGAAAA-CGAGTCGTCTTGCCATGAAACTTCACGTGAAGG---C-TTAAGG
* * * *
16002912 GACAAATTGTAT-AATTTACAAGCCGTAAAAATGGTATTGGCATGTAGAAATATGAAAGATGTGC
559 GAC-CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATG-AAGATGTGC
* ** * * *
16002976 CAAAACCCCACCTACCACCCTATTAAT-CACGGC-TGCGCATGCCCGTCTCTTTGGTCGG-ATAG
622 CTAAA-CCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CCCGTCTCTCTGGCCGGCGTAG
* * * ** * *
16003038 TGCCCTGCCCGTCCGCTCGGCCAC-CGTTGCGTCGATTTTTCTTAGGCATACG-AGGTC---CTC
685 TGCCC-GCCCGCCCGC-CGCCCACTCGTTTCGTCGA-TTGGCTTAGGCATACGAAGTTCATTCCC
*** * * * * * * *
16003098 A-AAAAAAAT-TGCATCAAAATGA-GG-TGCAGCAGCAGGATCGAGCAGCACGCAGAGGGGGACC
747 AGTCTAAGATCAG-ACCAGACTGAGGGTTGCGGCAGCAGGATCG-GTAGCACGCAGAGGGGGA-C
* * * * * *
16003159 CGCCAT-GATCCCCTGGCTTGCACATCCC-TCCCTCCGGACCGGTTGAGTGCCTGCACG
809 CG--ATCGATCCCC-GGCTTGCGCATCCCGCCCCTCTGG-CCGGCTGAGCGCCCGCACG
* * *
16003216 CTTGTTTCGTGGGTTGACTTAGGCATACGGAG-TCATTCCCAGTCTACGCATGCGGAGTTCATTC
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAGTTCATTC
* * * *
16003280 CTAGTCTAAGATCAGATCTGACCA-AGGGTTGCGACTGCACATGCCGGGCTCGGGCATGTGCTGG
65 C-AGTCTAAGA-CGGA-C-G--CAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGG
* * *** * **
16003344 TGTCGTATTTTTCTTTGTCGGGGCAGCATCGCTAGAGCATCACCGGAGAACCTGACCGATGGCAT
124 TGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAG-A----A-C-----C--
* *
16003409 TGGGGTTCCGACGATCGGGGAGGCCGGGGGGGTGTGCGCACATGAAGTGCGATGGGTGCTGGTAC
176 ------T--GAC---C----A-----GGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTAC
* *
16003474 TTGGCCCTTATATTGGCCCCCTATTCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCA
221 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
* * *
16003539 TTTGACATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCA
286 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
* * *
16003604 AATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACGAAAA
351 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAA
* * *
16003669 TACAAGGATCACGTCTACCAAGTTTGGTGCCAAAACTCCATCCGAAAAAATTTTTAAAAAATCCC
416 TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTTAAAAAATCTC
* * * * * * *
16003734 GAACCGTAAAAAGGCTT-GAAAATCGTAAAAAATAGAAAGCGAGTCGTCTTGCCATGAATCTTCA
480 GAAACGCAAAAA-GTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* * * ** *
16003798 CGTGAAGGCTTAAGGGACCAGTATATGAATTTACAAGCCATAAAAATGGTATTGGCACACAAAAA
544 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
* * **
16003863 TATGAAGATGTACCTAAACCCACCAACCACCCTATCGATCCACGGCTTAAGCATCCCGTCTCTCT
609 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
** * * * ** *
16003928 GGCCGATGTAGTGCCCGCCCTCCCACC-CTTTCGTTCGTTTCGTCGGTTGGCTTAGGCATACGGA
674 GGCCGGCGTAGTGCCCGCCCGCCCGCCGC--CCACTCGTTTCGTCGATTGGCTTAGGCATAC-GA
* * * **
16003992 A-TTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTG-GGATAGCAGGATCGGCAGCACATA
736 AGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGG-CAGCAGGATCGGTAGCACGCA
** * * * *
16004055 GAAAGGGACCCAGTCGATCCCCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCTCGCATG
800 GAGGGGGACCGA-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
* *
16004120 CTCGTTTGGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTAAGCATACGGAGTTCATTC
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAGTTCATTC
* * * *
16004185 CTAGTCTAAGACTGCACCGGACCA-AAGGTTGCGGTAGCACATACTGGGCTCGGGCATGTGCTGG
65 C-AGTCTAAGAC-GGA-C-G--CAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGG
*
16004249 TGCCGTATTTTTCTTCACCGGGGCACCATCGCCGGAGGATCATCGGAGAACCTGACTGGCGGCAT
124 TGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGA-G--CAT--------C--AC---CGG-A-
** * * *
16004314 TGGGGTTCTGGCGATCGGAGGGGCCGAGGGGGGGTGTGCGCACATGATGTGAGATGGGTACTGGT
171 ----GAAC---C--T--GA----CC-A-GGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGT
* * * *
16004379 GCTTGGCCATTATATTGGCCCCTTAT-CCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAG
219 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
* *
16004443 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGCAATGGGGACAATTTTTT
284 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
* * * * * *
16004508 CAAATGGTCACAAAAACTTGTACACTTCAAATTTTTAGCTGAATTTTTCTATGCATGCCAATAAA
349 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
* *
16004573 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCC
414 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCT
* * *
16004638 CGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCA
479 CGAAACGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* ** *
16004703 CATGAAGGCTTAAGGGACCATTGTACAAATTTACAAGCCATAAAAATGGCATTGGAATGCAGAAA
544 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
* * *
16004768 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAGCCATGGCTTGCGCATCCCATCTCTCT
609 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * * *
16004833 GGTCGGCGTAGTGCCCGCCCG--C-CCGCCCGCTCGTTTCGTCAATTGGCTTAGGCATACGGAGT
674 GGCCGGCGTAGTGCCCGCCCGCCCGCCGCCCACTCGTTTCGTCGATTGGCTTAGGCATACGAAGT
* * * * *
16004895 TCATTCCTAGTCTAAGATCAGACCTGATTGAGGGTTAG-GGTAGTAGGATCGGTAGCACGCAGAG
739 TCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTT-GCGGCAGCAGGATCGGTAGCACGCAGAG
* * * * **
16004959 GGGGACCTACCCGATCCCCGGCTTGAGCATCCCGCCCCTTTGGCCGATTGAGCGCCCGCACG
803 GGGGACCGA-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
*
16005021 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCTTACAGAGTTCATTC
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAGTTCATT-
* * * *
16005086 CCAGTCTAAGATCAGACTGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGATGGT
64 CCAGTCTAAGA-CGGAC--G-CAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* *
16005151 GCTGCATTTTTCTTCACCTGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCGATGGCATT
125 GCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACC-A-GG----
16005216 GGGGTTCCGACATCGGGCGGGCCGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTG
184 GGGG-T--G---T-------G-C---------A--CACATGATGTGCGATGGGTGCTGGTACTTG
* * *
16005281 GCCCTTATATTGGCCTCCTGTCCCTCATCAAACCTCGAGAACTCACACCCCCTTATAGAGCATTT
224 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* *
16005346 GAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAAT
289 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* * *
16005411 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCGTGCCAATAAAAATAC
354 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
** * * ** *
16005476 AAGGATCATATCTACCTAGTTTGGGGCCAAAACTCCTTCTGAAAATTTTTTAAAAAATC-CCAAA
419 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAA
* *
16005540 CCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCATCTTGCCATGAAACTTCACGTG
484 -CGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
*
16005605 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGAATGCAGAAATATG
548 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATG
* * *
16005670 AAGATGTGCCTAAACCCACCTACCACCCTATCGAGCCACGGCTTGCGCATCCCATCTCTCTGGTC
613 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * *
16005735 GGCGTAGTGCCCGCCCGCCTG--G-CCGCTCGTTAT-GTCGATTGGCTTAGGTCATACGGAGTTC
678 GGCGTAGTGCCCGCCCGCCCGCCGCCCACTCGTT-TCGTCGATTGGCTTAGG-CATACGAAGTTC
* * * * * **
16005796 ATTCCCAGTCTAAGATTAGATCTGAACTGAGGGTTCCGGTAGTGGAGATCGGGTTAGCACGCCAG
741 ATTCCCAGTCTAAGATCAGACCAG-ACTGAGGGTTGCGGCAGCAG-GATC-GG-TAGCACG-CAG
* * *
16005861 AGGGGGACCTG-GCTGATCCACCAGGCTTGTGCGAGTCCCGCCCCTCTGGCCCGCTGAGCGCCCG
801 AGGGGGACC-GATC-GATCC-CC-GGCTTGCGC-A-TCCCGCCCCTCTGGCCGGCTGAGCGCCCG
*
16005925 CATG
860 CACG
* *
16005929 CTCGTTTCGTGGGTTGGAGCGTGAGAGGCATACGGAGTTTCATT-CCAGTATAAAGC-TACAGAG
1 CTCGTTTCGTGGGTT-GA-C-T--TAGGCATACGGAG-TTCATTCCCAGTCT-AAGCATAC-GAG
* * *
16005992 TTTCATATCCCAGTCTATAGATCAGATCAGAACCGAGGGTTGCGGTAGCACTATGCTGGGCTCGG
58 -TTCAT-T-CCAGTCTA-AGA-CGGA-C-G--CAGAGGGTTGCGGCAGCAC-ATGCTGGGCTCGG
* * * * *
16006057 GCATGTGATGGTTGCCGCATTTTTCTTCGCCTGGGCACCATCATCTGGTAGCATCACCGGAGAAC
113 GCATGTGCTGG-TGCCGCATTTTTCTTCACCGGGGCACCATC-GCCGG-AGCATCACCGGAGAA-
* * * *
16006122 CGACTGGCGGCAGTGGGTGTTCCGACGATCGGGGGGCCGAGGGGGTGTATCGCAGATGATTGTGT
174 C--CT----G-A----------C--C-A----------G-GGGGGTGT-GCACACATGA-TGTGC
* * *
16006187 GATGGGAGCCTGGTACATGG-CCTTA-ATTGGCCTCCTATCCCTCATCAAACCTCGAGAACTCAC
206 GATGGGTG-CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
16006250 ACCCCCTTATAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTTTGAAAT
270 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
16006315 GGGGACACTCTTTTCAAATGGTCACAAAATCTTGTAAACTTCGAGTTTTTAGCTGAATTTTTTTT
335 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * **
16006380 TGCACGCCAAAAAAAATACAAGGATCACGTTTACCAAGTTTGGCTCCAAGAA-TCCTTCCGAAAA
400 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA-AACTCCTTCCGAAAA
* * * * *
16006444 AATTTTAAAAAATCTCGAACCGAAAAAAATTT-AGAAAATTGTAAAAAATAGAAAACGAGTCGTC
464 AATTTTAAAAAATCTCGAAACGCAAAAAGTTTCA-AAAATCGTGAAAAATAGAAAACGAGTCGTC
*
16006508 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAACAATGG
528 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* ** *
16006573 CATTGGCATGCAGAAATATGAAGCTGCACCTAAACCCACCTACCGCCCTATCGATCCACGGCTTG
593 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
16006638 CGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCG--C-CTGCCCACTCGTTTCATCGGTTGG
658 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCCCACTCGTTTCGTCGATTGG
* * ** * * *
16006696 CTTAGTCATACGGAGTTCATTCCCAGTCTAAGATTGGA-CTGAATCGAGGGTTGCAGCAGCAGGA
723 CTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACT-GAGGGTTGCGGCAGCAGGA
* * * * * * * *
16006760 TCGGTAGCACACAGAGGTGGACCCAGTCGAAT-CCCAGCTTGCACATCTCGCCCCTCTGGTCGGT
787 TCGGTAGCACGCAGAGGGGGACCGA-TCG-ATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * *
16006824 TGACCACCCGTACA
850 TGAGCGCCCGCACG
* *
16006838 CTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTC
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAGTTCATT-
* *
16006903 CCAGTCTAAGATCGGATCGGACCGAGGGTTG-GGACAGCACATGCTGGGCTCGAGCATGTGCTGG
64 CCAGTCTAAGA-CGGA-C-G-CAGAGGGTTGCGG-CAGCACATGCTGGGCTCGGGCATGTGCTGG
** ** * * * **
16006967 TGCCGTGTTTTTCTTCGTCGGGGCACCATCGTCGGAGTACCTGACCGACGGCATTGGGGTTCC-G
124 TGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAG---C--ATC-AC--C---GGAGAACCTG
* ** * * *
16007031 ACGATTGGGGGGGCCGGGGGGTGTGTGCACATCATGTGCGATGGGTGCTGGTGCTTGGCTCTTAT
178 AC-----------CAGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* *
16007096 ATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTT
232 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* *
16007161 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCCCAA
297 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
*
16007226 AATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGTCCATGCCAA-AAAAATTACAAGGATC
362 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAA-TACAAGGATC
*
16007289 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATC-CTG-AACGACAA
426 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTC-GAAACG-CAA
* *
16007352 AAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCT
489 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
*
16007417 TAAGGGACCATTGTATGAATTTACAAGCCGTAAAAATGGCATTGGCATGCAGAAATATGAAGATG
554 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * * *
16007482 TGCCTAAACCAACCTACCATCCTATCGATCCACGACTTGTGCATCCCGTCTCTCTGGCCGGCGTA
619 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * *
16007547 GTGCCCGCTCGCCCGCCTGCCCACTCGTTTCGTC-AGTTGGATTAGGCAAACGAAGTTCATTCCC
684 GTGCCCGCCCGCCCGCC-GCCCACTCGTTTCGTCGA-TTGGCTTAGGCATACGAAGTTCATTCCC
* * * * **** * *
16007611 AGTCAAAGATCATACCAGA-TCGAGGGTTACGGGAGCAGGATATACAGCAAGCAGAAGGGGACCC
747 AGTCTAAGATCAGACCAGACT-GAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGA-CC
* * * * *
16007675 GGTTGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGTTGAGCCCCCGCACG
810 GATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
** * *
16007729 CTCAATTCATTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-CG-G--------
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAGTTCATTCC
* ** * *
16007783 A--C-----CGGAC-C-GAGGGTTACGATAGCACATGCTGGGCTCGAGCACT-TGTTGGTGCCGC
66 AGTCTAAGACGGACGCAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCA-TGTGCTGGTGCCGC
* * *
16007838 ATTTTTCTTCACCGAGGCAGCATCGCCGGAGCATCATCGGAGAACCTGACCGGCGGCATTGGGGT
130 ATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGA----C--CA--GGGG-
* *
16007903 TCCGACGATCAGGGGGGCCAGGGGGTGCGCACATGATGTGCGATGGGTGCTGGTAGTTGGCCCTT
186 ---G--G-T---------------GTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
* * * *
16007968 ATATTGGTCCCCTATCCCTCATCAAACCTCGGGAACTCACACCCCCATAAAGAGCATTTAAGATT
230 ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
16008033 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
295 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
* * * * *
16008098 AAAATCTTGTACATTTCGAGTTTTTAGCTAAAGTTTTTTGTACAAGCCAACAAAAATACAAGGAT
360 AAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGAT
* * *
16008163 CACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATC-CCAAAGCACAA
425 CACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAA-CGCAA
* *
16008227 AAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTCTCGCCATGAAACTTCACGT--A----
489 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
* * * *
16008286 -AAGGGACCACTGTATGAATTTACAAGCCACAAAAAAGGCATTGGCATGTAGAAATATGAAGATG
554 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
* * ** ** *
16008350 TACCTAAA-CCACCTACCACCCTATTGATCCATAGCTTGCGCATCCAATCTCTCTGGCCGACGTA
619 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
** * * * * *
16008414 GTGCCTACCAGCACGCCCGCTCA-T--TTT-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
684 GTGCCCGCCCGCCCG-CCGCCCACTCGTTTCGTCGATTGGCTTAGGCATACGAAGTTCATTCCCA
* * * * * * * * **
16008475 GTCTAAGATCGGATCGGA-TCGAGGGTTGTGGCGGCAAGATCGATAGCACGCAAAGGGGCCCCGA
748 GTCTAAGATCAGACCAGACT-GAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCGA
* * * *
16008539 TCGATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACG
812 TCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
* *
16008591 CTCGTTTTGTGGGTTGAGTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-CG-G--------
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAGTTCATTCC
* ** *
16008645 A--C-----CGGA-TC-GAGGGTTGTAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCA
66 AGTCTAAGACGGACGCAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
** * * ** *
16008701 TTTTTCTTCGTCAGGGCACCATCACCGGAGCATCGTCGGAGAACCTGA-CAGGCGGCATTGGGGT
131 TTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCAGG-GG----GGTG-
** *
16008765 TCCGGCGATCGAGGGGCCGGGGGGTGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
190 T---GC-A-C-A-----C--ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* * * *
16008830 TATCCCTTATCAAACCTCGAGAACTCACAACCCCTTAAAAAGCATTTGAGATTTTACAGGTTTCC
242 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
*
16008895 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGG-CACTTTTTTCAAATGATCACAAAATCTTGTAC
307 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
*
16008959 A-TATCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGCCTACCA
372 ACT-TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCA
* * * * * * **
16009023 TGTTTGCGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTTGAACCGC-AAAATTTTTGAAA
436 AGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAACGCAAAAAGTTTCAAAA
* * *
16009087 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATAAAACTTCACGTGAAGGCTTAAGGAATCATT
501 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATT
* * * * * *
16009152 GTATAAATTTGA-AAGCCATAAAAAAGGCATTGGCATACAGAAATCTG-AGAATGTGTCTAAGCC
566 GTATGAATTT-ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAG-ATGTGCCTAAACC
* ** *
16009215 CACCTCCCACAGTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCTGGCGTAGTGCCCGCCC
629 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC
* * *
16009280 G--C-CCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCA
694 GCCCGCCGCCCACTCGTTTCGTCGATTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCA
* * * * ** * * * *
16009342 GACCAAACCGAGGGTTACGACAGCAGGATCGACAACACGCAGAAGGGGACCCGGTCGATCCCCAG
759 GACCAGACTGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGA-CCGATCGATCCCCGG
* * *
16009407 CTTGCGCATCCCGCCCCTATGGCCGGCTGAGCTCCCGTACG
823 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
* * * * *
16009448 CTCATTTCGTGAGTTGAGTTAGGCATACGAAGTTCATTCCCAGTCTAAG-AT-TG-G--------
1 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAGTTCATTCC
*
16009502 A--C-----CGGAC-CA-AGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCGGCA
66 AGTCTAAGACGGACGCAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
* * * * * * *
16009558 CTTTTATTCGCCGGGGCAACATTGCCGGAGCATCATCGGAGAACCTGACGGC-GGCATTGTGGTT
131 TTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGAC--CAGG----G-GGGT
* * ** * *
16009622 TTGGCGATCGGGGGGTCGGGGGGTGTGCGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCT
189 GT-GC-A-C------AC--ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
*
16009687 ATCCCTCATCGAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
243 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
*
16009752 GCCAATAGCCATTAAAGTGTCTGAAATGGGG-CACTTTTTTCAAATGGTCACAAAA
308 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
16009807 ATACAAGGAT
Statistics
Matches: 7019, Mismatches: 892, Indels: 860
0.80 0.10 0.10
Matches are distributed among these distances:
836 1 0.00
837 1 0.00
840 2 0.00
842 1 0.00
843 2 0.00
844 4 0.00
845 62 0.01
846 3 0.00
848 55 0.01
849 129 0.02
850 143 0.02
852 12 0.00
853 7 0.00
854 13 0.00
855 247 0.04
856 333 0.05
857 215 0.03
858 37 0.01
859 53 0.01
860 100 0.01
861 34 0.00
862 209 0.03
863 144 0.02
864 67 0.01
865 80 0.01
866 4 0.00
867 61 0.01
868 74 0.01
869 9 0.00
870 263 0.04
871 385 0.05
872 11 0.00
873 2 0.00
874 190 0.03
875 136 0.02
876 8 0.00
878 4 0.00
879 5 0.00
880 6 0.00
881 1 0.00
882 24 0.00
883 268 0.04
884 159 0.02
885 74 0.01
886 6 0.00
887 6 0.00
888 5 0.00
889 3 0.00
890 10 0.00
891 167 0.02
892 140 0.02
894 7 0.00
896 2 0.00
897 51 0.01
898 476 0.07
899 80 0.01
900 95 0.01
901 357 0.05
902 42 0.01
903 56 0.01
904 137 0.02
905 349 0.05
906 244 0.03
907 83 0.01
908 86 0.01
909 225 0.03
910 3 0.00
911 9 0.00
912 2 0.00
913 43 0.01
914 25 0.00
915 12 0.00
916 16 0.00
917 35 0.00
918 59 0.01
919 57 0.01
920 3 0.00
921 19 0.00
922 3 0.00
923 418 0.06
924 23 0.00
925 10 0.00
927 1 0.00
928 1 0.00
929 1 0.00
934 1 0.00
939 1 0.00
941 4 0.00
944 1 0.00
946 1 0.00
947 4 0.00
950 1 0.00
951 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (863 bp):
CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAGTTCATTCC
AGTCTAAGACGGACGCAGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
TTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCAGGGGGGTGTGCACA
CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
ATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
TCCGAAAAAATTTTAAAAAATCTCGAAACGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCCCACTCGTTTCGT
CGATTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCA
GCAGGATCGGTAGCACGCAGAGGGGGACCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
CGGCTGAGCGCCCGCACG
Found at i:16003272 original size:25 final size:26
Alignment explanation
Indices: 16003238--16003287 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16003228 GTTGACTTAG
16003238 GCATACGGAG-TCATTCCCAGTCTAC
1 GCATACGGAGTTCATTCCCAGTCTAC
* *
16003263 GCATGCGGAGTTCATTCCTAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
16003288 AGATCAGATC
Statistics
Matches: 22, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
25 9 0.41
26 13 0.59
ACGTcount: A:0.22, C:0.28, G:0.22, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAC
Found at i:16004171 original size:26 final size:26
Alignment explanation
Indices: 16004142--16004194 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16004132 GTTGACTTAG
16004142 GCATACGGAGATCATTCCCAGTCTAA
1 GCATACGGAGATCATTCCCAGTCTAA
* *
16004168 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGATCATTCCCAGTCTAA
16004194 G
1 G
16004195 ACTGCACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGATCATTCCCAGTCTAA
Found at i:16006890 original size:26 final size:26
Alignment explanation
Indices: 16006860--16006912 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16006850 GTTGACTTAG
16006860 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
16006886 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16006912 G
1 G
16006913 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:16010298 original size:26 final size:26
Alignment explanation
Indices: 16010269--16010350 Score: 146
Period size: 26 Copynumber: 3.2 Consensus size: 26
16010259 TGGGTTGACT
*
16010269 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATATGGAGTTCATTCCCAGTC
*
16010295 TAAGCATATGGAGTTCATTCCCACTC
1 TAAGCATATGGAGTTCATTCCCAGTC
16010321 TAAGCATATGGAGTTCATTCCCAGTC
1 TAAGCATATGGAGTTCATTCCCAGTC
16010347 TAAG
1 TAAG
16010351 ATCGGACCGG
Statistics
Matches: 53, Mismatches: 3, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
26 53 1.00
ACGTcount: A:0.28, C:0.24, G:0.18, T:0.29
Consensus pattern (26 bp):
TAAGCATATGGAGTTCATTCCCAGTC
Found at i:16012850 original size:26 final size:26
Alignment explanation
Indices: 16012814--16012866 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16012804 GTTGACTTAG
* *
16012814 GCATATGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTCCATTCCCAGTATAA
*
16012840 GCATACGGAGTCCATTCCCAGTCTAA
1 GCATACGGAGTCCATTCCCAGTATAA
16012866 G
1 G
16012867 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTCCATTCCCAGTATAA
Found at i:16013503 original size:907 final size:902
Alignment explanation
Indices: 16010892--16033921 Score: 12994
Period size: 902 Copynumber: 25.1 Consensus size: 902
16010882 ATAAACTGAT
* * * * **
16010892 GGTTGCAGCAGCAGGATCGATAGCACGTAGA-GGGGACCCGATCGGTCCCCGGTTTATGCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
** * * * *
16010956 GCCCCTCTTACCGGTTGAGCACCCGCATGCTTGTTTCGTGGGTTGACTTAGGCA-ATGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * *
16011020 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCAAGGGTTGCGGTA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * * *
16011085 GCACATGCTGGGCTCGGCCATGTGCTGGTACCGCATTTTTCTTCATCGGGGCACCATCGTCAGAG
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
16011150 CATCGTCGAAGAACCTGACCGGTGGCATTGGGGTTCCAACGATCGGGGGGGTCGGGGCGGGGTGT
261 CATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGG-C-CGG-GGGGTGT
* *
16011215 GCGCACATGATGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAG
322 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
*
16011280 CCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
387 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * *
16011345 AAACTGTCTGGAACGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
452 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
16011410 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTT-GGGCCAAAA
517 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * * * *
16011474 CCCCTTCCGAAAAAATTTTAAAAAATCCTGAATCGTAAAAACTTTTGAAAA-CGTGAAAAATAGA
582 CTCCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGA
*
16011538 AAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
647 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
*
16011603 CCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
712 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* *
16011668 ATCCACGGCTTGCGCATCCCGTATCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCTGCTCG
777 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCG
* * * * * ** *
16011733 TTTCGTTGATTGGCTGAGGCATACGGAGTTCATTCCCAGCCTAAGATCTTACCAAACCTAG
842 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * * * * *
16011794 GGTTGCAGAAGCAAGATTGACAGCACGCAGAGGAGGACTCGATCGATCCCCGGCTTCCGCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
** * * * *
16011859 GCCCCTCTAACCAGCTGAGCACCCGTACGCTCGTTTCGTGGCTTGACTTAGGCGTACGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * * * * *
16011924 TTCCCAATCTAAGCATATGGAGTTCATTCCTAGTCTAAGATCGAACCGGACCGAGGGTTGTGACA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * *
16011989 GCACATGCTGGGCTCAGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGTCAGAG
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
16012054 CATCGTCGGAGAACCTGACTGGCGGGATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGTGCGCG
261 CATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCG
* *
16012119 CACATGATGTGAGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAATCT
325 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
16012184 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
390 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
*
16012249 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCT
455 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
**
16012314 GAAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGATAAAACT
520 G-AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * *
16012379 CCTTTCGAAAATATTTTAAAAAATCCCGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAA
584 CCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAA
*
16012444 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAACGGACCATTGTATGAATTTACAAGCC
649 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* * * * * * *
16012509 ATGAAAATGTCATTGGCACACATAAATATGAAAATGTGCCTAAACCCACCAACCACCCGATCGAT
714 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * *
16012574 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCTGCCCGCCCGCTCATT
779 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTT
* * *
16012639 TCGTCGGTTGGCTTAGGCATACGGAGTACATTCCCAGTCTAAGATCTGACCAGATCGAG
844 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* *
16012698 GGTTGCAGCAGCAGGATCGGTAGCACAG-AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCC
1 GGTTGCAGCAGCAGGATCGATAGCAC-GCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCC
* * * * *
16012762 CGCCCCTCTGTCCGGCTGAGCGCCCGTACGCTCATTTCGTGGGTTGACTTAGGCATATGGAGTTC
65 CGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
* * * *
16012827 ATTCCCAGTATAAGCATACGGAGTCCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGC
130 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* * * * *
16012892 AGCACATGCTGGGCTCGGGCATATGCTGGTGCCACATTTTTTTTTGTCGGGACACCATCGCCGGA
195 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
* * * * *
16012957 GTATCACTGGAGAACCCGACCGACGGCATTAGGGTTTCGACGATCGGGGGGGCCGGTGGTGGTGT
260 GCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GG-GGTG-
* * * * *
16013022 TTCGTACATGATGTGCGATGGCTGCTGGTGCTTGGCCCTTATATTGGCCCCCCTATCCCTAATCA
321 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCCTATCCCTCATCA
* *
16013087 AACCTCGAGAACTCACACCCCCTTAAGGAGCATTTGGGATTTTACAGGTTTGCTGCCAGTAGCCA
385 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
16013152 TTCAAGTCTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
450 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * * *
16013217 TAGCTCAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACATCTACCAGGTTTGGGGCAAA
515 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * *
16013282 AAATCCTTCTGAAAAAATTTTAAAAAATCCAGAACTGTAAAAAGTTTTGAAAATCGTGAAAAATA
580 AACTCCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATA
*
16013347 GAAAACGTGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
645 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* *
16013412 AGCCATAAAAATAGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
710 AGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * * * * * * * *
16013477 CGATCCACAGCTTGTGCAAT-CCGTCTCTCTAGCCGACGTAGTGCCCGTCCGTCCACCAGGCCGT
775 CGATCCACGGCTTGCGC-ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGC
* * ** * * *
16013541 TCGTTTTGTCGATTGGCTTAGGCATACTTAGTTCGTTCCCAGCCTAAGAT-TGTACCAGACCGAG
839 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTG-ACCGGACCGAG
* * * * * *
16013605 GGTTGC-G--GTA-G--C-AT-GCA---A-AGGGGGACCCAGCCGATCCCTGGCTTGCACATCTC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* *
16013658 GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* *
16013723 TT-CC---C--A--AT-C-----T-A-----A--C----ATCGGACCGGACCGAGGGTTACGACA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * * * *
16013762 GCACATGCTAGGCTCAGGCATTTGCTGGTGTCGCATTTTTCTTCATCGGGGCACCATCTCCGGAG
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
16013827 CATCGTCGGAGAACCTGACCGGCGACATTGGGGTTTCGGCGAT-AGGGGGGCCGGGGGGGTGTGC
261 CATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGC
* *
16013891 ACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACC
324 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
16013956 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAA
389 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
16014021 ATTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCCAGTTTTTAGC
454 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
*
16014086 TGAATTTTTTTTGTGCATGCC-AC--CAA-A-AA-GATCACGTCTACCAAGTTTGGGGCCAAAAC
519 TGAA-TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * *
16014145 TCCTTCCGAAAAAACTTTAAAAAATCCTGAACCACAAAAAGTTTTGAAAATCGTGAAAAATAGAA
583 TCCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAA
*
16014210 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCTTTGTATGAATTTACAAGC
648 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* *
16014275 CATTAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
713 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* ** * * * *
16014340 TCCACAGCTTTTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCTCGCCTGCTCGCTCGT
778 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGT
* * **
16014405 TTCGTCTGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGATTGGACCGAG
843 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * ** * * * *
16014465 GGTTGCGGTAGCAGAATCGGCAGCACGCAGAGGGGGACTCGGTCGATCCTCAGCTTGTGCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* ** *
16014530 GCCCCTTTGGCCGGCTGAGCTTCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* *
16014595 TTCCCAGT-T-----TA---AG---A-T--C---C---GA-C---CAGG-CCGAGGGTTGTGGCA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * * * * *
16014634 GTAGATCCTGTGCTCGGGCACGTGCTGGTGTCACATTTTTCTTCGTCGGGG---CAT---C---G
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * *
16014690 --T--TGGAGAACCTGACCGGCAGCATTGGGGTTCCGGCGATCGGGGGGGCCAGGGGGTGTTCGC
261 CATCCTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGC
* * * *
16014751 ACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCTTCAAACCTT
326 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
16014816 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
391 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
*
16014881 TGTCTGAAATGGGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
456 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* *
16014946 AATTTTTTTGTGCATGCCAATAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCC
521 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
** * *
16015011 TTCCGAAAAAGCTTTAAAAAATCCCA-AACCACAAAAAGTTTTGAAAATCGTGAAAAATAGAAAA
586 TTCCGAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAA
* * *
16015075 CGAGTCGTCTTGCCATGAAACTTTATGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCA
650 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* * * * * *
16015140 TAAAAATGGCATTGGTACGCAGAAATATAAACATGTGCATAAACCCAGCTACCACCCTATCGATA
715 TAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * * *
16015205 CATGGCTTACGCATCCCGTCTCACTGGCCGGCGTA--G--AGCCCGCCCGCCTGCCCGCTCGTTT
780 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTT
* ** * * * *
16015266 CATCATTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTACGATCAGACTGGACCGAG
845 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * * ** * *
16015324 GGTTGCGGCAGCAAGATCGGTAGCACGTAGAGGGGGACTCGACCGATCCCCGGCTTGCTCATCCT
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* * * *
16015389 GCCCCTCTGTCCGGCTGAGCACCCGCACGCTCATTTTGTGGGTTGACTTAGGCATATGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * * *
16015454 TTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGACGGTTCCGACA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * *
16015519 GCACATGCTGGGCTCAGGCATGTGCTGGTGCCGAATTTTTCTTCGTCGGGGCACCATCGCTGGAC
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
16015584 CATCGCCGGAGAACTTGACCGGCGTCATTGGGGTTCCGACAATCGGGGGGGCGGGGGGGTGTGCG
261 CATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCG
*
16015649 CACATGATGT--GA---------G-A--T-G----------GG-----T-GCCCTCATCAAACCT
325 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* *
16015683 CAAGAACTCACACCCGCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
390 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* * *
16015748 GTGTTTGAAATGTGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC-AGGTTTTTAGA
455 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA-GTTTTTAGC
* * * *
16015812 TGAATTTTTTTATGCATACCAACCAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACT
519 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * * * *
16015877 CCTTCCGAAAAAAATTTAAAAAATCCTGAATCGCAAAAATTTTTGAAAATCATGAAAAATAGAAA
584 CCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAA
* * *
16015942 ACGAGTCGTCTTGCCATGAAACTTCATGTGAAAGCTTAAGGGACCATTGTATGAATTTACAATCC
649 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
*
16016007 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTACACCCACCTACCACCCTATCGAT
714 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * *
16016072 -CAGTGGCTTGCGCATCCTGTCTCTTTGGCCGGCGTAGTGCCCGCCTGCCCGCCCGCCCGCTTGC
779 CCA-CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCG-CC-C--GC
* * * *
16016136 TCGTTTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGAT-TGGATCGGACTGAG
839 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCT-GACCGGACCGAG
* * * * ** ** *
16016200 GGTTACAACAGTAGGATTGGCAGCTTGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* * ** * *
16016265 ACCCCTCTGGCCGGCTCAGTGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * * * ** * *
16016330 TTCCCAATCTAAGCATACAGAGTTCATTCCCAGTTTAAGATCGGACCAGACTAAGGGTTACAGCC
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC-GGC
* * * * * * *
16016395 A-CACGTGCTAGGCTCGAGCATATGCTGGTGCCGTATTTCTCTTCGTCGGGGCACCATCGCCAGA
195 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
* * * ***
16016459 GCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCAACGATCGTCAGGGCCGGGGGGTGTGC
260 GCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGC
* * * *
16016524 GCACATGATGTGTGATAGGTGCTGGTACTTGGCCCTTCTATTGGCCCCCTATCCGTCATCAAACC
324 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* *
16016589 TCAAGAACTCACACCCCCTTAAAGAGCATTTGAGCTTTTACAGGTTTGCTGCCAGTAGCCATTAA
389 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
16016654 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
454 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * *
16016719 TGAATTTTTTTGTGCATGCGAACAAAAATACAAGGATCACATCTAACAAGTTTGGGGCCAAAACG
519 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-
* * * * * * * *
16016784 T-TTTCTGAAAAAATTTTAAACAATCCCGAATCGCAAAAAGTTTAAAAAATTGTTAAAAATAGAA
583 TCCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAA
*
16016848 AACGA-TTGATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
648 AACGAGTCG-TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
16016912 CCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCGCCTACCACCCTATCG
712 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * * * * *
16016977 ATCCGCGGCTTGCGCATCCTGTTTCTCTGGTCGACGTAGTGCCCACCCGCCCGCCCGGCCGCTCG
777 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCG
** * * * **
16017042 TTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTGCTAGTCTAAGATCGGATTGGACCGAG
842 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * ** * *
16017103 GGTTGC-GACAGCAGGATGGGTAGCATGCAGAGGGGCCCCCGGTCGATTCCCGGCTTGCGCATTC
1 GGTTGCAG-CAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCC
** * *
16017167 CTTCCCTCTGGCCGGCTGAGCACCCGCACGCACGTTTCGTGGGTTGACTTAGGCATACAGAGTTC
65 CGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
16017232 ATTCCCAGTCTAAGC-T-C-G-G---------A--C------C-G---GG-CCGAGGGTTGCGGC
130 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* * * * *
16017271 AACACATGCTGGGCAT-GGGCATGTGTTGATGCCGCATTTTTCTTCATTGGGGCACCATCGCCGG
195 AGCACATGCTGGGC-TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG
* * * * * **
16017335 AGCATCGCCGGAGAACCTGATCGACGACATTGGGGTTCCGATGATCGGATGGGCCGGGGGGGTGT
259 AGCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGT
* * *
16017400 GCGCACATGATGTGCGATAGGTGCTGGTACTTGGACCTTATATTTGCCCCCTATCCCTCATCAAA
322 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * * *
16017465 CCTCGAGAACTCACA-CCCCTTAAAAAGCTTTTAAGATTTTACAGGTTTGCTTCCAGTAGCCATT
387 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * * * *
16017529 AAAGTGTCTGAAAT-GGGACACTTTTTTGAAAAGGTCAAAAAATCTTATACACTTCGAGTTTTTG
452 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* **
16017593 GCTTAATTTTTTTGCCCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
517 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * * * *
16017658 CTCCTTCCAAAAAAATTTTAAAAAATCCCGAACAGTAAAAAGTTTCAAAAATCATGAAAAATAGA
582 CTCCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGA
*
16017723 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTTACAAG
647 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
16017788 CCATAAAAATGGCATTGGCAGGCAAAAATAT-AGAGATGTGTCTAAACCCACCTACCACCCTATC
712 CCATAAAAATGGCATTGGCACGCAGAAATATGA-AGATGTGCCTAAACCCACCTACCACCCTATC
* * * * * * * * * *
16017852 GATCCACGGGTTGCGCGTCACGTATCTCTGGCCAGCATAGTGCCCACCCGCTCGCCCGTCCGTTC
776 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTC
* * * *
16017917 GTTTCGTCGGTTGGCTTAGGCATACAGAATTCATTCTCAG-CATAAGATCGGACCGGACCGAG
841 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC-TAAGATCTGACCGGACCGAG
** * * *
16017979 GGTTGCAGCAGCACCATCGATAGCACACAGAGGGGGACCTGGTCGATCCCCGGATTGCGCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* * * * *
16018044 GCCCCTCTGGCC-GATCGAGCACCCGCACACTCGTTTCATGGGTTGACTTAGGCATACAGAGTCC
66 GCCCCTCTGGCCGGCT-GAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
* * * *
16018108 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGACCGAACCGGACCGAGGGTTGTGGT
130 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* * * * *
16018173 AGCACATGCTGGGCTTGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATTGTCAGA
195 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
* * * * *
16018238 GCATCATCAGAGAACCTGA-C--C-G-A---------CGGCGATCGGGGGGCCCGGGGGGGTCTG
260 GCATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTG
* * ** *
16018289 CACACATGATGTGCGACGCATGCTGGTACTTGGCCCTTATGTTGGCCCCCTATCCCTCATCAAAC
323 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
16018354 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
388 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
16018419 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTACACTTCGAGTTTTTAG
453 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* *
16018484 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCATGTTTGGGGCCAAAAC
518 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* *
16018549 TCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCGCAAGAA-TTTTCAAAAATCATGAAAAATAG
583 TCCTTCCGAAAAAATTTTAAAAAATC-CAGAACCGCAAAAAGTTTT-AAAAATCGTGAAAAATAG
* *
16018612 AAAATGTGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
646 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
**
16018677 GCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
711 GCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * **
16018742 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCTGTGTAGTGCCCGCCCGCCCGCCCGTTCGCTC
776 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTC
* * * * *
16018807 GTTTCGTCGATTGGTTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAG
841 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * * * *
16018869 GGTTACAGTAGCAGGATCGACAGCACGTAGAGAGGGACTCGGTCGATCCCCGGCTTGTGCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* *
16018934 GCCCCTCTGGCCGGCTGAGCACCTGCACGCTCGTTTCGTGGGTTAACTTAGGCATACGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * * * * * *
16018999 TTCCCAATCTAAGCATACAGAGTTCATTCGCAGTCTAAGATTGGGCCGGACCGAGGGTTACGGTA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * * *
16019064 GCACATGCTGGGCTCGAGCATGTGTTGGTGTCGCATTTTTCTTC-ACTGGGGCACCATCGTCGGA
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGCCGGA
* * * * *
16019128 GCATCGTCGGTGAACCTAACTGGCGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGTGTAC
260 GCATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGC
* * *
16019192 GCACATGATGTGTGATGGGTGCTGTTACTTGGCCCTTATATTGGCCCCCTGTCCCTCATCAAACC
324 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * * *
16019257 TCGAGAAGTCACACCCCCTTAAGGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACAATTAA
389 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* ** * *
16019322 AGTGTCTGAAATGGGGAAACTTTTTTCAAATGGTCACAAAATGATGTACACTTTGAGTTTTTAGT
454 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* **
16019387 TGAGTTTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
519 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * *
16019452 CCTTCCGAAAAAATTTTAAAAAATCTC-GAACAGCAAAAAGTTTCAAAAATCGTGAAAAATAAAA
584 CCTTCCGAAAAAATTTTAAAAAATC-CAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAA
* *
16019516 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAACTTACAAGC
648 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* * * *
16019581 CAAAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATTGA
713 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * *
16019646 TCCACGGCTTGCGCATCCCGTCTTTCTGGTCGGCATAGTGCCCGCCCGCCCGCCAGCCTGCTCGT
778 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGT
* * * * * * *
16019711 TTCATTGGTTGGCTTAGGAATACGGAGTTCATTTCCAGTCTGAGATC-GAACTGGACCGAA
843 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTG-ACCGGACCGAG
* * * * * * *
16019771 GGTTGCAGCAGTAGAATCGATAGCACACAGAGGGTGACTCGGTCGATCCCCAGCTTGTGCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
16019836 GCCCCTCTGG-CGGACTGCA-CACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
66 GCCCCTCTGGCCGG-CTG-AGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
* * * *
16019899 CATTCCCAGTCTAAGCATACGGAGTTTATTCCCAGTCTAAGATCGGATCGAACCGAGGGTTGTGG
129 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * * * * *
16019964 CAGCACATGCTGGGCTCGGGCATGTGTTGGTGTCGCAATTTTCTTCGCCAGGGCACCATCGCTGG
194 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG
* * *
16020029 AGCATCACCGGAGAACCTGACTGGCGACATTGGGGTTCCGACGATC-GGGGGGCCGAGGGGG-GT
259 AGCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCG-GGGGGTGT
*
16020092 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCACATCAAA
322 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * * *
16020157 CCTCGACAACTCACACCCCTTTAAAGAGCATTTGAGATTTCACCGGTTTGCTGCCAGTAGCCATT
387 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
16020222 AAAGTGTCTGAAATGGGGACAC-TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
452 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
16020286 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCTAAAA
517 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
** * * *
16020351 CTCCTTCTAAAAAAATTTT-TAAAATCCCA-AACCGCAAAAAGTTTCAAAAATCATGAAAAATAG
582 CTCCTTCCGAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAG
* * *
16020414 AAAACGAGTCGTCTGGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATAAGAATTTACAA
646 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* *
16020479 GCCTTAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
711 GCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * *
16020544 GATCCACGGCTTGCGCATCCCGTCTCTCCGGCCGGCGTAGTGCCTGCCTGCCCGCCCGCCCGCTC
776 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTC
* * * ** *
16020609 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCCTTCCCTGTCTAAGATCAGATTGGATCGAG
841 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * *** * ** **** *
16020671 GGTCGCGGCAGCAGGATCGACAGCACGTAGAGGTTTTA---GCTAAATTTTTTTGTGCATGCGAA
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGG-GGGACCCGGTCGA--TCCCCG-GCTTGCG--
** * * ** * ** * **** **** *** *
16020733 CAAAAATACAAGGATCACATCTATCAAGTTTGGGGC-CATAAATC-CTTC-TAAAATAATTTAAA
60 C----AT-C-CCG--CCCCTCTGGC-CGGCT-GAGCACCCGCA-CGC-TCGTTTCGTGGGTT-GA
*** ** * * *** * ** *
16020795 AAAATCCCAAACCGTAAAAAGTT--TTGAAAATCGTGAAAAATA-GAAAACGAGTCGTC-TTGCC
112 CTTA-GGCATA-CG----GAGTTCATTCCCAGTC-T-AAGCATACG-----GAGT--TCATTCCC
* ** ** ** *** **
16020856 ATGAAACTTCACGTGAAG-GCTTAATGGACC-ATTGTATGAATTAACAAGC-CATAAAAAT-GGC
162 A-G-----T--C-T-AAGATCGGACCGGACCGAGGGT-TG---CGGC-AGCACAT---GCTGGGC
* * * * ** * ** * ** **** ** *
16020917 AT-TGGCATGCAGAAAT-ATGAAG-ATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCT
209 -TCGGGCATG-TG--CTGGTGCCGCATTTTTCT---TCGTCGGGGCA-CC-ATCG--CCGGAGCA
*** ** * ** * * * * ***
16020979 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCACCCGCCCGCTCGTTTC-ATTGATTGGCTTA
263 T-C-C-TGGAG-AAC-CTGACCGGC---G-G--CA-TTG---G--GGTTCCGA-CGATCGG-GGG
*** * * * * * *
16021043 GGCATATAGAGTTCATTCCCAGTCTAAGATCG-GACCGGACTGAGGGTTACGACAATAGG-ATCG
309 GGC--CGGGGGGT-GTGCGCA--C-ATGAT-GTG--C-GA-T--GGG-T--G-C--T-GGTA-C-
* ** * ** ** * ** * ** * * * * * *
16021106 GTT-GCACGCAGAGGGGGACCCGATCGATC-CCCGA-CTTGTGCATTC-CGCCCCTCTGGTCAGC
352 -TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC-CT--T-A-A
* *** * * * * ** * *
16021167 TGAGCACCCGCACGCTCGTTT-CGTGGGTTGACTTAGGCA-TACGAAATT-CATTCCCAGTCT-A
411 AGAGCATTTG-A-GAT--TTTAC-AGGTTTG-C-T-GCCAGTA-GCCATTAAAGT----GTCTGA
** ** * ** ***
16021228 AGCATATGGA-GTTTATTCCTAGTCTAAGATCAGATCGGACCGAGGGTTGTGGCAGCACATGCTG
463 A--ATGGGGACACTT-TT--T--TC-AA-AT--GGTC--ACAAAATCTTGT------ACA--CT-
* * * * ** * ** * *
16021292 GGCTCGGGCATGTGTTGGT-GCCGTATTTTTCTTCGTCGGGACACCATCGTCGAAGCATCGCCAG
506 ---TC--G-A-GT-TT-TTAGCTGAATTTTT-TT-GT--GCATGCCA---AC-AAAAAT-ACAAG
* * ** *** ** **** * ****
16021356 AGA--AC--CTGACCAGCGGCATTGGGGTTCCGACGA-TCGGGGGGGCCGGGAGGGGTGT-GGGC
553 -GATCACGTCT-ACCA--AG-TTTGGGG--CC-AAAACTC----CTTCCGAAAAAATTTTAAAAA
*** *** ** *** * ***** * *** * * * * ** *
16021415 A--CATGATGTGCAATGGGTGCT-GGTA-CTTGGCCCTTA-TATTGGTGCCCTATCCCTCATCAA
606 ATCCA-GAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC-CATGAA
* * ** * * * *
16021475 ACCTCGA-GAACTCACACCCCCTTAA-AGAGCATTTGAGATTTTACAGGTTTGCTACTACTAGCC
669 ACTTC-ACG---TGA-A--GGCTTAAGGGACCA-TT--G-TATGA-A---TT--TAC-A--AGCC
* * ** * ** * * * * ** ***
16021538 AT-TAAA--GCGTTTGAAATGGGGACACTTTTTTCAA-ATG-GTCACAAAATCTTGTACACTTTG
714 ATAAAAATGGC-ATTGGCACGCAGA-A---ATATGAAGATGTG-C-CTAAA-C--CCAC-CTACC
*** * **** * * ** * * * ** *
16021598 AGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT-ACCAAGTTTG
768 A--CCCTATC-G-A-T-CCACG-GCTTG-C-GC----AT-C-CCG-TCTC-TCTGGCC-GGCGTA
* * * * *** *****
16021662 GGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG-CAGAAAGTTTCAAAAATT-G
815 GTGCC----CGCC---CG-----------------CCCG-CCCGCCCGCTCGTTTCGTCGGTTGG
*** *** * ** * *
16021725 -TTAAAAATA--GAAAACGAGTTGTCTTGCCATGAA-A-CT-TCACGTGA---AG
855 CTTAGGCATACGGAGTTC-A-TT-CCCAGTC-T-AAGATCTGAC-CG-GACCGAG
* * * * * * * **** * ** ***
16021771 GCTT-AAGGGACCATTG-TACGAATTTA-CAAGCCATAAAAATGGCATTGGTAGGCAGAAATATG
1 GGTTGCA-GCAGCA-GGAT-CG-A--TAGCACG-CA-GAGGGGGACCC-GGT---C-G--ATCCC
** * ** * ** *** * *
16021833 AAGATGTGC-CTAAACC-CACCTAC-CACCCTATCGATCCACGGCTTGCGCA-TCTCGTCTCTC-
51 CGGCT-TGCGC-ATCCCGCCCCT-CTGGCCGGCT-GA-GCAC--C---CGCACGCTCGT-T-TCG
* * ** ** * * ** * * * **
16021893 T-GGCTGACGTAGTGCCCGCCCACCCGCCCGCTCGTTTTGTCGGTTGGTTAAGGTATACAAAGTT
104 TGGGTTGACTTA--G---G--CATACG-GAGTTC--ATTCCCAG-T--CTAA-GCATACGGAGTT
* * * * * * * ** *
16021957 CATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTACGGCAGTAGGATAGGCAGAACGCAGAGG-
155 CATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA-CAT--GCTGGGCTC-G-GGC
** ** * * ** * * * ** * * *
16022021 GGGACCCGGTAGATCCCCAGCTTAC-GCATC-CTGC-CCCTCTGGCCGGCTGAGCA-CCCGTACG
215 ATGTGCTGGT-G--CCGCATTTTTCTTCGTCGGGGCACCATC--GCC-G--GAGCATCCTGGA-G
* * *** **
16022082 --CTTGTTA-CGTGCGTTG-ACTTAGGTATACAGAGTTCATTTCCAGTCTAAGATCAGACTGAAC
271 AACCTG--ACCG-GCG--GCA-TT-GG------G-G-----TTCC-G---ACGATC-GGGGGGGC
* * * * * * * * *
16022143 CGAGGGTTACAGT-AGCACATGCTAG-GC--TCGG-GCAT-GTGCTGGTGCCACATTTTTCTTCG
312 CGGGGGGT---GTGCGCACATGAT-GTGCGATGGGTGC-TGGTACTTG-GCC-C--TTAT-AT--
* * * * * * * * * *** * **
16022202 TCGGGGCACC-AT-CGTCGGAGCATCACC-GGAGAACCTGAC-CGGCGGCGTTGGGGTTGCGACA
365 T--GGCCCCCTATCCCTC--ATCA-AACCTCGAGAA-CTCACAC--C-CCCTTAAAG-AGC-ATT
** * ** * * * *** * ** ** * *
16022263 ACAGGATCGGTAGCATACAGAG---GGGGACCCG-ATCGATCCCCAG-CT-TGCGATTTGGCCCC
419 TGA-GAT---T---TTACAG-GTTTGCTG-CCAGTAGCCAT-TAAAGTGTCTGAAATGGGGACAC
* ** *** *** * * * * **
16022322 TCTGGTCGGCTGAG-CAC-CCGTAC--GCT-CATTTCGTGGGTTAACTTAGGCATACGAAATTCA
474 TTTTTTCAAATG-GTCACAAAAT-CTTG-TACACTTC--GAGTT--TTTA-GC-T--GAATTTTT
** * * * * * * *
16022382 TT-CCCA-GTCTAAGCATATGGAGTTTATTCCCAATCTAA-GATCA-GACCGGACCGAGGGTTGT
528 TTGTGCATG-CCAA-CA-A---A----AAT----A-C-AAGGATCACG-TC-TACC-AAGTTTGG
** * * * **** ** *** * *** ** ***
16022443 GG-CAGCACATGCTGGGCTCGGGCATGTGTTGGTGCTGTATTTTTCTTCACCGAGGCACCATCGT
574 GGCCAAAAC-TCCT----TC-CGAAAAAATT--T--TAAAAAATCCAGAACC---GCAAAAAGTT
*** ** ** ** * * ** * **** * * *
16022507 CGGAGCATCGTCGAAGAACCAGACCGACGGCATTGGGGTTCCGACGATCGGGGGTGC-CGAG-GG
626 TTAAAAATCGT-GAA-AAATAGA-AAAC-G-AGTCGTCTT--G-CCAT-GAAACTTCACGTGAAG
* * ** ** * * * * ** ** *
16022570 GGTGT--GCG-CACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCC
682 GCT-TAAGGGAC-CAT--TGT---ATGAAT--T--TAC-AAGCCATAAAAATGG--CATTGGCAC
* * ** ** * * ** * * * * ** **
16022632 TCATCAAACCTCG-AGAACT--C-ACACCC-CTTTAAAGAGCTTTTAAGATTTTACAGATTTGCT
733 GCA-GAAATAT-GAAGATGTGCCTAAACCCAC-CT-ACCACCCTAT-CGA-TCCAC-GGCTTGC-
* * *** * * *** * * ********* ** * ****
16022692 GCCAGTAGCCAT-TAAAGTGTCTGAAATGGGGACACTTTTTTTAAATGGTCACAAAATC-TTGTA
790 G-CA-T-CCCGTCT-CTCTGGCCGGCGTAGTG-C-C--CGCCCGCCCGCCCGCCCGCTCGTT-T-
* * * * ** * * * * *
16022755 CACTTCGAGTT--TTTA-GC-T--GAATTTTTTTGCGCATGCCAACAAAAATACAAGGATCCCGT
845 --CGTCG-GTTGGCTTAGGCATACGGAGTTCATT-CCCA-G---TCTAAGAT-C--TGA--CCG-
* *
16022814 CTACC-AT
896 -GACCGAG
* ** * ** *** * ***** ***** * * ** ** *
16022821 GTTTGGGGC--CAGGACTC-CTTCCAAAAAAATTTTAAAAAATCTCAAACCGTAAAAAGTTTTGA
1 GGTTGCAGCAGCAGGA-TCGATAGCACGCAGA-GGGGGACCCGGTCGATCC-----CCGGCTTGC
** ****** ****** ** * ** * *
16022883 AAAT--CGTAAAAAATAAAAAAC-GAGTCATCTTGCCATGAAAC-TTCACGTGAAG--G-CTTAA
59 GCATCCCG-CCCCTCTGGCCGGCTGAG-CA-CCCG-CACG-CTCGTT-TCGTG-GGTTGACTT-A
* * ** * * * * * * ** * *
16022941 TGGACCAT-TGTA-TGAATATACAAGCCATAA--AAATGGCA-TTGGCATGCAGAAATATGAAGA
116 -GG--CATACGGAGTTCAT-TCCCAGTC-TAAGCATACGG-AGTT--CATTC-CCAGTCT-AAGA
** * * * * *
16023001 T-GTG-CCTAAACCCA--GCTAC--CA-CCCTAT--T--GATC---CATG-GCT--TG-CGCATC
171 TCG-GACC-GGACCGAGGGTTGCGGCAGCAC-ATGCTGGGCTCGGGCATGTGCTGGTGCCGCAT-
* * * * * * ** * ***
16023048 CTGTCTCTCTGGACGGTGTAGCACC--CGCCCG-CCTATCC-GCCCGTTCGTTTCGTCGGTTGGG
232 -T-TTTCT-TCGTCGG-G--GCACCATCGCCGGAGC-ATCCTG---G--AG-AAC--CTGACCGG
* * * * **** * *** * * *
16023109 TTAGGCATACGGAGTTCATTCCCAGTTTAAGATCAGACCAGACTAAGGGTTGTG-ACAGCAGGAT
282 --CGGCAT-TGG-G---GTT-CC-G---ACGATC-GGGGGGGCCGGGGGGTGTGCGCA-CATGAT
** * * * * * * * * * * * ****
16023173 CAGCAGCAAGCAGAG-GGGGACCTGATCAATCCTTGTCTTGCGCATCCC--GCCC-C-TTTGGCC
333 GTGC-G-ATG-GGTGCTGGTACTTG-GC---CCTTATATTG-GC-CCCCTATCCCTCATCAAACC
* ** * * * * * * * * *** * *** *
16023233 GGCTGAGCGCCTGCACGCTCCTTTCATGGGTTGACTT-AG-GCATACAAAGTTCATTCCCAGTCT
389 -TC-GAG-AACT-CACACCCCCTTAAAGAG--CATTTGAGATTTTAC-AGGTTTGCTGCCAG--T
** ** **** *
16023296 AAGCATACGGAGTTCATTCGTAGTCT-AAGAT-CAGAC-C--AGACCAAGGGTTGTGGT-AGC-A
445 -AGC---C--A-TT-A-AAGT-GTCTGAA-ATGGGGACACTTTTTTCAA-----ATGGTCA-CAA
* ** * ** ** * * * * *
16023354 CATGC-TGGGCTC-GGGCATGTGCTGATGC-CACATTTTTCTTCGCTGGGGCACCGTC-ACTGGA
493 AAT-CTTGTACACTTCG-A-GTTTTTA-GCTGA-ATTTTT-TT-G-T---GCA-TGCCAAC--AA
** * ** * * * *** *** *****
16023415 GCAT-CACCGGAGAAC--CTAATCGACGGCGTTGGGGTTCCGGTGA-TCGGGGGGCCG-GGGGGT
544 AAATACA-AGGATCACGTCT-A-CCA-AG-TTTGGGG--CC-AAAACTC---CTTCCGAAAAAAT
* **** * *** * *** ** *** * **** * * ** * **
16023475 GTGCGCACAT---GATGTGCGATGGGTGCT-GGTA-CTTG-GCCCT-TATATTG-GCCCCCTATC
598 TTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCT-T-
* * * * ** * * * * *
16023532 CCTCATCAAACCTCGA-GAACTCACACCCCTTTAA-AGAGCATT-TGA-GATTTTACAGGTTTGC
661 GC-CATGAAACTTC-ACG---TGA-A-GGC-TTAAGGGACCATTGT-ATGAATTTACAAG---CC
*** * * ** * * * ** * ** * **
16023593 -TGCCAGTAGCCATT-AAAGTGTCTGAAATAGGGACACTTTTTG-C-AAATGGTCA-C-A-AAAT
714 ATAAAAAT-GGCATTGGCA-CG-CAGAAATA-TGA-A-GATGTGCCTAAA--CCCACCTACCACC
* * * *** * * ** ** * * **
16023651 CT-T-G-TACACTTTGGGTTTTTGGCTGAAT-TTTTTTATGCAT-GCCAACAAAAATACAAGGAT
771 CTATCGATCCAC----GG--CTT-GC-GCATCCCGTCTCT-C-TGGCCGGC-GTAGTGC-CCG--
* *** *** **** *** * * ***
16023711 CACGTCTACCAAGTTTGGGGCCAAAAATC-TTTCTGAAAAAATT---TTAAAAAATCCCGAACCG
822 CCCG-C--CC--G---CCCGCC--CGCTCGTTTC-G--TCGGTTGGCTT-AGGCAT-ACGGAGTT
*** * * ** * *
16023772 CA--AAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
872 CATTCCCAG--TCTAAGATC-TG----ACCG-GACCGAG
* * * *** * * ** * ** * * ** *
16023809 TCGTCTTGCCATGAAACTTTA-C-AT-GAAGGCTTA-CGGGACCATTGTATGAATTTACAAGCCA
1 --G-GTTG-CA-GCAGCAGGATCGATAGCACGCAGAGGGGGACC-CGGT-CG-A--TCCCCGGC-
** *** * ** * * * *
16023870 TAAAAATG-GCATTGGCATGCAGAAATATGAAGATAAGCCTAAACCCACCTAC-CACCCTATCGA
55 T-----TGCGCA-T--CCCGC--CCCTCTG--G--CCGGCT-GA-GCACC--CGCACGC--TCG-
** * * * * * * * *
16023933 TACACGGCTTGCGCATCTCGTCTCTCTGGC-T-GGTGTAGTGCCCCTGCCCGTTCGTTTCGTTGG
99 T-TTC-G--TG-G-GT-T-GACT-T-AGGCATACG-G-AGT--TCATTCCC---AG--TC-----
** * * * * * *
16023996 TTGGCTTA-GGCATACGGAGTTCATTCCCAGTCAAAGATCAGACCAGACCAACGATGCAGCTGCA
140 TAAGCATACGG---A--G--TTCATTCCCAGTCTAAGATCGGACCGGA-C--CGA-G-GGTTGC-
** * * * * ** **** *
16024060 GGATCGACAGCACGCA-GAAGGGGACCCGGTGGATCCCCTGCTTGTGCATC-TCGGCCCTCTGGT
192 -G---G-CAGCA--CATG-CTGGG-CTCGG-GCAT---GTGCTGGTGCCGCAT-TTTTCT-TCGT
*** * * * * * * ***
16024123 CGGCTGAGCGACCGCA-CGCTCGTTTCAT--GGGTTG-ACTTAGGCATACGGAGTTCATTCCCAG
242 CGG--G-GC-A-C-CATCGC-CGGAGCATCCTGG-AGAACCT--G-A-CCGGCG-GCATT-GGGG
* * ** * * * * * * * * * *
16024184 -T-CTAAGATCGGATCGGACCGAGGGCTGCGGTAGCACATGCTG-G-GCTCGG-GCAT-GTGCTG
293 TTCCGACGATCGG-GGGGGCCGGGGGGTG-TG-CGCACATGATGTGCGATGGGTGC-TGGTACTT
*** * * * * * * ** * ***
16024243 GTGCCACATT-T-TTCTTCTCCAAGGCAC-CATC--ACC-GGAGAACTTGACCGACGGCATTGGG
354 G-GCC-C-TTATATTGGCCCCCTA-TCCCTCATCAAACCTCGAGAAC-TCA-C-ACCCCCTTAAA
* ** * ******** * * * ** * *
16024302 GTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC-GCACATGATGTGCGA-T-GGGTG-CTGGTAC
412 G----AGC-AT--TTGAGATTTTACAGGTTTGCTGC-CA-G-T-AGCCATTAAAGTGTCT-GAAA
* * * ** ** * ** * ** *** ***
16024363 T-TGG-CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
465 TGGGGACACTT-T-TT----TCAAAT-GGTCA-CAAA-ATCTTGTA--CACTTCGAGTT-TTTAG
** * * * *
16024426 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC-ATTAAAGTGTCTGAAATGGGGA-CACTTTT
518 C---TGA-ATTTT-----TTTG-TG-CA-T-GCCAACAAAAAT-AC---AA---GGATCACGTCT
** * * ** *
16024489 TTCAA--AT-GGTCACAAAATCTTGTACACTTAGACTTTTTAGCTGAATTTTATTGTGCTTGCCA
563 ACCAAGTTTGGGGC-CAAAA-C---T-C-CTT---C-------C-GAA--AAAAT-T--TT----
* * ** * * *
16024551 ACAAAAATGCAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCTAAAAAATTTTAACAA
601 A-AAAAAT-CCA-GAAC-CG-C-AAAAAGTTT-----TAAAAAT-C--GT---G------AA-AA
*
16024616 ATCCCAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGAGTGTCTTGCCATGAAACTT
642 AT----A--G--AAAA----C---------G---AGT------C----GTCTTGCCATGAAACTT
* *
16024681 CACGAGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGA
673 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
* *
16024746 AATATGAAGTTGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
738 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * * *
16024811 CTGGCCGACGTAGTGCCCGCCTG-CCG---GCCTGCTCATTTTGTTGGTTGGCTTAGGCATACGG
803 CTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * ** *
16024872 AGTTCATTCCCAATCAAAGATCAAACCAGACCGAG
868 AGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * * * * * **
16024907 GGTTAC-GATAGCAAGATCGACAGCACGCATAGGGGGACTCGGTCTATCCTCGG-TTTAGCATCC
1 GGTTGCAG-CAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCC
* * * * *
16024970 CACCCCTCTGGTCGACTGAGCGCCTGCACG--C--TT-GT---TT--C----G--T--GG-GTTC
65 CGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
* * * * *
16025016 A----C--T-TAAGCATACGGAGTTCGTTCCCAGTCTAAGATCGGACCAGACCAAAGGTTGTGGC
130 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* * * * * * ** * *
16025074 AACACATGCAGGGTTCGGGCATGTACTAGTGCTGCATTTTTCTTCGTTAGGGCACCATTGTCGGA
195 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
* * * * *
16025139 TCATCGCCGGAGAACCTAACCGGCGGCATTGGGGTTCTGATGATC--GGGGGCCGAGGGGGTGTG
260 GCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCG-GGGGGTGTG
* * * *
16025202 CGCACATGATGTGCAATGGTTGCTGGTGCTTGGCCCTTATATTGGCCACCTATCCCTCATCAAAC
323 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
*
16025267 CTGGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
388 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
16025332 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGACTTTTTAG
453 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *
16025397 CTGAATTTTATTGTGCTTGCCAACAAAAATGCAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
518 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * * *
16025462 TCCTTCTG-AAAAATTTTAACAAATCC-CAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAAAA
583 TCCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAA
*
16025525 AACGAGT-GTCTTGCCATGAAACTTCACGAGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
648 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
*
16025589 CATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
713 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * *
16025654 TCCACAGCTTGCGTATCCCGTCTCTCTGGCCAGCGTAGT----GCCCGCCCGCCTGCCCACTCGT
778 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGT
* * * * * * ** *
16025715 TTCGTTGGTCGGCTTAGGCATACAGAGTTCATTCCCAATCTAAGAGCAGATTGAACCGAG
843 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * * * *
16025775 GGTTAC-GATAGCAGGATCGACAGCAAGCAGAGGGGGA-CCTGTCCGATCCCCGACTTACGCATC
1 GGTTGCAG-CAGCAGGATCGATAGCACGCAGAGGGGGACCCGGT-CGATCCCCGGCTTGCGCATC
* * * * * *
16025838 CCGCCCCTCTGACCGGTTGAGCGCCCGCACGCTCG--T--T---TTAACTTAAGCATACGAAGTT
64 CCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
*
16025896 CATTCCCAGTCTAAG-AT-C--AG---A----C---C----A---GACC--A---AGGGTTGTGG
129 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
*
16025935 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCG-CTGGGGCACCAT---C-
194 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGCCG
*
16025995 --G--T-C-GGAGAACCTGACCGGCGGCATTAGGGTTCC-ACCGATC------G--GGGGGGTGT
258 GAGCATCCTGGAGAACCTGACCGGCGGCATTGGGGTTCCGA-CGATCGGGGGGGCCGGGGGGTGT
* * *
16026045 GCGCACAAGATGTGCGATGGTTGCTGGTACTTGAG-CCTTAT-TTGGCCCCCTATCCCTCATTAA
322 GCGCACATGATGTGCGATGGGTGCTGGTACTTG-GCCCTTATATTGGCCCCCTATCCCTCATCAA
* * * **
16026108 ACCTCGAGAACTCACACCCTCTTAAAAAGCATTTGAGATTTTGCAGGTTTGCTGCTGGTAGCCAT
386 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
16026173 TAAAGTGTCTGATATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCT
451 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* *
16026238 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGTCGAA
516 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * *
16026303 ACGCCTTCCGAAAAAATTTTAAGAAATCCCA-AACTGCAAAAAGTTTCAAAAATCGTG-AAAATA
581 ACTCCTTCCGAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATA
16026366 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
645 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* *
16026431 AGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATTTGCCTAAACCCACCTACCACCCTAT
710 AGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * *
16026496 CTATCCATGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGTCCTCCCGCC
775 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG----CCCGCC
* * * * * * * * ** *
16026561 CTCCCGTTCCATTGGTTGGCTTAGGTATACGGAGTTCATTCCCAATGTAAGATC-GAACCAAATC
836 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTG-ACCGGACC
16026625 GAG
900 GAG
* * ** * * * *
16026628 GGTTGCGGTAG-AGGATCGGCAGCACGCAGAGGGGGACTCGATCGATCCCCGGCTTTCGCATCTC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* * * * * * * * *
16026692 GTCCCTCTGGTCGGCTGAGCGCCCGCGCGCTCATTTCATGGGTTGACTTAAGCGTACGAAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * ** * * *
16026757 TTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGATTGGACCGAGGGTAGAGACA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * ** ** ** * *
16026822 GCACATGCTGGGCTCGGGCATGTGCTGGGGCCACATTTTTCTTCACCAAGGTGCCATCGTCGGAA
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
16026887 CATCACCGGAGAACCTGACCGGCTGCATTGGGGGTTCCAACGAT---------CAGAGGGTGTGC
261 CATC-CTGGAGAACCTGACCGGCGGCATT-GGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGC
* *
16026943 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCTATCACTCATCAAACC
324 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
16027008 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAA
389 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
*
16027073 AGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
454 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * * *
16027138 TGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACATCTACAAAGTTTGGGGGCCAAAAA
519 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGGCCAAAAC
* * * **
16027203 GCC-TCCTGAAAAAATTTTAAAAAATCCCA-AACCGCACAAAGTTTCAAAAATTATGAAAAATAG
583 TCCTTCC-GAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAG
* * *
16027266 AAAACGAGTCATCTTGCCTTGAAACTTCACGTGAAGGCTTGAGGGACCATTGTATGAATTTACAA
646 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
** *
16027331 GCCATAAAAAATGGCATTGGCACATAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
711 GCCAT-AAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* *
16027396 CGATCCACGGCTTGGGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCT
775 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCT
* * * * * * *
16027461 CGTTCCGTCGATTGGCTTAGGTATACGGAGTTCATTCCCTGTCTAAGATCAGACTGGACTGAG
840 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
** * * * * * **
16027524 GGTTGTGGCAACAGGATC-AGTAGTACGTAGAGGGGGACCCAGCCGATCCCCATCTTGCGCATCC
1 GGTTGCAGCAGCAGGATCGA-TAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCC
* * *
16027588 CGCCCTTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGTAGTTC
65 CGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
** * * * *
16027653 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGGGGT
130 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* *
16027718 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCAGA
195 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
* * * * * **
16027783 GCATCGTCGGAGAACCTGACTGACGGCTTTGGGGTTACGGTGATCGGGGGGGCCGGGGGGTGTGC
260 GCATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGC
* * * *
16027848 GGACATGATGTGCGATGGGTGCTAGTACTTGACCCTTATATTGGCCCCCTATCCCTCAACAAACC
324 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* *
16027913 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGCAGCCATTAA
389 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
*
16027978 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGC
454 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* *
16028043 TGAATTTTTTTGTGCATGCCAACAAAAATACAACGATCACGTCTACCAAGCTTGGGGCCAAAACT
519 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * * *
16028108 CCTTCC-AAAAAATTTTTAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAA
584 CCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAA
* * *
16028172 ACGAGTCGTCTTACC-TAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATTAATTTAGAAGC
649 ACGAGTCGTCTTGCCAT-GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* * * * * *
16028236 CATAAAAATGGCATTGACATGCAAAAATATGAAGATGTCCCTAAACCCACCTAACACCCTATTGA
713 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* ** * *
16028301 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGCAT-CCC-CCCGCCCATCTGCTCGCTC
778 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG--TGCCCGCCCGCCCGCCCGCCCGCTC
* ** * *
16028364 GTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATAGGATCAGACCGAG
841 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
** * * * * *
16028426 GGTTGTGGCAGCTGGATCAGCA-A-CACGCAGAGGGGGACCCGATCGATTCTCGGCTTACGCATC
1 GGTTGCAGCAGCAGGATC-G-ATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATC
* * * * *
16028489 CCGCCCCTCTGGCTGGCTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATATGGAGTT
64 CCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
* * * * * * *
16028554 CATTCCCAGTCTATGCATACAGAGTTCATTCCAAGTCTAAGATTGGACCGAACCAAGGGTTGCGA
129 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * * *
16028619 CAGTACATGCTGGGCTCGGGCATGTGCTAGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGG
194 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG
* * * * *
16028684 AGCATCGCCGGAGAACCTGACTGGCGGCATTGGGGTTCAGACGATCGGGGGGGCCGAGGGGTGTA
259 AGCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTG
* * *
16028749 CGCACATGATGTGTGATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTATCGCTCATCAAAC
323 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * *
16028814 CTCGAGAACTCACACCCACTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTG
388 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
16028879 AAGTGTCTGAAATGGGGACACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
453 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *
16028944 CTGAATTTTTTTGTGCTTGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
518 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * *
16029009 TCCTGCTGAAAAAATTTTAAAAAATCCCA-AACTGCAAAAAGTTTCAAAAATCGTGAAAAATAGA
583 TCCTTCCGAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGA
* *
16029073 AAACAAGTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
647 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* *
16029138 CCATAAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
712 CCAT-AAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
** * * * *
16029203 GATCCACCACTTGCGCATCTCGTCTCTCTGGCCAGCGTAAT----GCTCGCCCGCCCGCCCGCTC
776 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTC
* ** * *
16029264 G-TTCTATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATAAGACTGGATCGAG
841 GTTTC-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * * * * * * * *
16029326 GGTTGCGGTAGTAGGATCAACAGCACGGAGAGGGGAACCCGGTCGATCCCCGTCTTGCACATTCT
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* * *
16029391 GCCCCTCTGGCCGGCTGAGCGCCCCCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* ** * *
16029456 TTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCAAACTGGACCGAGGGTTGCGACA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * *
16029521 GCACATGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCAGAG
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * ** * * *
16029586 CATCGTCGGAGAGCCTGACCGACGGTATTGGGGTTGCGGTGATCGGGTGGACCGGAAGGGTGTGC
261 CATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGTGTGC
* * * * *
16029651 GGACGTGATGTGCGATGGGTGCTAGTACTTGACCCTTATATTGGCCCTCTATCCCTCAGT-AAAC
324 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA-TCAAAC
* *
16029715 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGCAGCCATTA
388 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
16029780 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAG
453 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* *
16029845 CTGAATTTTTTTGTGCATGCCAACAAAAATACAACGATCACGTCTACCAAGCTTGGGGCCAAAAC
518 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * * *
16029910 TCCTTCC-AAAAAAGTTTT-AAAAATCCCGAACCGTAAAAAGTGTTGAAAATCATGAAAAATAGA
583 TCCTTCCGAAAAAA-TTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGA
* * *
16029973 AAACGAGTCGTCTTACCTTGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
647 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * * * * *
16030038 CCATAAAAATGGCATTGACATGCAAAAATATGAAGATGTCCCTAAACCCACCTAACACCCTATTT
712 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA-TC
* * * *
16030103 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGCAT-CCC-CCCG-CTGATCCGCTCG
776 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG--TGCCCGCCCGCCCG-CCCGCCCG
** * *
16030165 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATAGGATCAGACCGAG
838 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
** * * * * * *
16030230 GGTTGTGGAAGCTGGATCAGCA-A-CACGCAGAGGGGGACCCGATCGATTCTCGGCTTACGCATC
1 GGTTGCAGCAGCAGGATC-G-ATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATC
* ** * * * * *
16030293 CTGCCCCTCTGGCTAGCTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATATGGAGTG
64 CCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
* * * * * * * *
16030358 CGTTCCCAGTCTATGCATACAGAGTTCATTCCAAGTCTAAGATTGGACCGAACCAAGGGTTGCGA
129 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * * *
16030423 CAGTACATGCTGGGCTCGGGCATGTGCTAGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGG
194 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG
* * * *
16030488 AGCATCGCCGGAGAACCTGACTGGCGGCATTGGGGTTCAGACGATCGGGGGGGCCGGGGGGTGTA
259 AGCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTG
* * *
16030553 CGCACATGATGTGTGATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTATCGCTCATCAAAC
323 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * *
16030618 CTCGAGAACTCACACCCACTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTG
388 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
16030683 AAGTGTCTGAAATGGGGACACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
453 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* *
16030748 CTGAATTTTTTTGTGCTTGCCAACAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
518 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * *
16030813 TCCTGCTGAAAAAATTTTAAAAAATCCCA-AACTGCAAAAAGTTTCAAAAATCGTGAAAAATAGA
583 TCCTTCCGAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGA
* *
16030877 AAACAAGTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
647 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
16030942 CCATAAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACTCTATC
712 CCAT-AAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
** * * * *
16031007 GATCCACCACTTGCGCATCTCGTCTCTCTGGCCAGCGTAGT----GCTCGCCCGCCAGCCCGCTC
776 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTC
** * *
16031068 G-TTCTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATAAGACTGGATCGAG
841 GTTTC-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * * * * ** * * *
16031130 GGTTGCGGTAGTAGGATCAACAGCACGCAGAGGGGGACTCGGTCGATCCCCATCTTGCACATTCT
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* * * * *
16031195 GCCCCTCTGGCCGGCTGAGCGCCCCCACGCTCGTTTCATGGGTTAACTTAGGCATATGGAGTTCA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* ** * *
16031260 TTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCAAACTGGACCGAGGGTTGCGACA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * *
16031325 GCACATGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCAGAG
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * ** *
16031390 CATCGTCGGAGAGCCTGACCGACGGTATTGGGGTTGCGGTGATCGGGTGGGCCGGAGGGGTGTGC
261 CATCCT-GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGTGTGC
* * * * *
16031455 GGACGTGATGTGCGATGGGTGCTAGTACTTGACCCTTATATTGGCCCTCTATCCCTCAGT-AAAC
324 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA-TCAAAC
16031519 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
388 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
16031584 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTACACTTCGAGTTTTTAG
453 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
*
16031649 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAT
518 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * *
16031714 TACTTCCGAAAAAATTTTAAAAAATCCCA-AACC-CCAAAA-TTTTGAAAATCCTGAAAAATAGA
583 TCCTTCCGAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGA
*
16031776 AAACGAGTCGTCTTGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
647 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * * *
16031841 CCATAAAAATGGCATTGGCATGCATAAATATGAAGATGTGCCCAAACCCACCTACCACCCTACCG
712 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
*
16031906 ATCCACGGCTTGCGCATCCCGTCTCCCTGGCCGGCGTAGT--------GCCCGCCCGCCCGCTCG
777 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCG
* * ** *
16031963 TTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGATTGGACTGAG
842 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * *** * *
16032024 GGTTGCAGCAGTAGGATCGACAGCAGGCAGAGGGGGACCCAACCGATCCCCAGCTTGCCCATCCC
1 GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
* * * *
16032089 GCCCCTCT-GCCGGCTGAGCTCCCGCATGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTAA
66 GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * * * * * ** *
16032153 TTCCCGGTCTAAGCGTACGGGGTTCATTCCCAGTCTAAGATTGGATCAGACCGAGGGTTATGCCA
131 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * * *
16032218 GCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTTGCCAGGGCACCATCGTCGGAG
196 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* ** ** * *
16032283 CATCGCCGGAGAACCTGACCGGCGGCATCAGGGTTCCGGTGATC-GGGGGG-CAGGGGGTGTGCA
261 CATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCG
* ** *
16032346 CACATGATGTGTGATGGGCACTGGTACTTGGCTCTTATATT-GCCCCCTATCCCTCATCAAACCT
325 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* **
16032410 CGGGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAATTTGCTGCCAGTAGCCATTAAA
390 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* *
16032475 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTGGCT
455 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
* * *
16032540 TAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACGTCTACCAAGTTTTGGGGCAAAAACT
520 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG-TTTGGGGCCAAAACT
* * *
16032605 CCTTCCGAAAAAATTTTAAAAAAT-C-TAACCGAAAAAAGTTTTTAAAATCGTGAAAAATAGAAA
584 CCTTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAA
* * *
16032668 ACGAGTCGTGTTGCCATGAAACTTCATGTGAAGGCTTAAGAGACCATTGTATGAATTTACAAGCC
649 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* *
16032733 ATAAAAATGGGATTGGCACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
714 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* ** * * * * *
16032798 CCACAGCTTATGCATCTCATCTCTCTGGCTGGCGTAGTGCCCGCCCGCTCGCCCGCCTGCTCGTT
779 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTT
* ** * *
16032863 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATCAACG
844 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGA-G
* ** * * * * * *
16032923 GCTATG--GCAGCAGGATCGGCAACATGCAAAGAGGGACTCGGTCGATCCCCGGCTTGGGCATCC
1 GGT-TGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCC
* * * * * *
16032986 CGCCCCTTTGGCTGGCTGAG-AGCCTGCACGCCCGTTTCGGGGGTTGACTTAGGCATACGAAGTT
65 CGCCCCTCTGGCCGGCTGAGCA-CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
* * * *
16033050 CATTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCAGATCGGACCGAGGGTTGCGA
129 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * * * * * *
16033115 TAGCACATGCTAGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTTGGGGCAGCATCGTCGG
194 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG
* * **
16033180 AGCATCACTGGAGAACCTGACCGGCGACATTGAGGTTCCGACGATCGGGGGGGCCCTGGGGTGTG
259 AGCATC-CTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTG
* *
16033245 CGCACATGATGTGCGATGGGTGCTGGTACTAGGCCCTTATATTGGCCCCCTATCCTTCATCAAAC
323 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * * * * *
16033310 CTAGAGAACTCTCGCCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCTATTA
388 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
16033375 AAGTGTCTGAAACGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
453 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * **
16033440 CTGAATTTTTTCGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGTGAAAAC
518 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * *
16033505 TCCTTCTGAAAAAATTTTAAAAAATCCCA-AACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGA
583 TCCTTCCGAAAAAATTTTAAAAAAT-CCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGA
* * *
16033569 AAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATTTGCAAG
647 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * * *
16033634 ACATCAAAATGGCATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
712 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* *
16033699 ATCCGCGGCTTGCGCATCCCGTCTCTCTGGCTGGCGTAGT----GCCCGCCCGCCCGCCCGCTCG
777 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCG
* * * * * * *
16033760 TTTCGTCAGTTGGCTTAGGCATACGAAGTTCGTTCCCAGTCTAGGATCAGACCGAACTGAG
842 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
* * * ** * * * * *
16033821 GGTGGC-GCCAGCAAGATTGGCAGCACGTAGAGGGGGACCCGATCGGTCCCCGGCTTGTGCATCT
1 GGTTGCAG-CAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCC
* * *
16033885 CGCCCCTCTGGCTGGCTGAGCGCTCGCACGCTCGTTT
65 CGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTT
16033922 AGATTGGGAA
Statistics
Matches: 17211, Mismatches: 3468, Indels: 2901
0.73 0.15 0.12
Matches are distributed among these distances:
843 208 0.01
844 74 0.00
845 180 0.01
847 1 0.00
849 9 0.00
850 1 0.00
851 31 0.00
852 71 0.00
853 67 0.00
854 3 0.00
856 1 0.00
857 16 0.00
858 232 0.01
859 235 0.01
860 321 0.02
861 8 0.00
862 61 0.00
863 245 0.01
864 6 0.00
865 153 0.01
866 61 0.00
867 16 0.00
868 667 0.04
869 151 0.01
870 6 0.00
871 4 0.00
872 154 0.01
873 9 0.00
874 6 0.00
875 7 0.00
876 838 0.05
877 173 0.01
878 89 0.01
879 3 0.00
880 7 0.00
881 7 0.00
882 3 0.00
884 6 0.00
885 111 0.01
886 3 0.00
887 7 0.00
888 109 0.01
889 260 0.02
890 873 0.05
891 10 0.00
892 5 0.00
893 198 0.01
894 132 0.01
895 103 0.01
896 142 0.01
897 438 0.03
898 276 0.02
899 628 0.04
900 1206 0.07
901 956 0.06
902 1955 0.11
903 982 0.06
904 1273 0.07
905 309 0.02
906 12 0.00
907 789 0.05
908 151 0.01
909 1 0.00
911 5 0.00
912 8 0.00
913 9 0.00
914 3 0.00
915 3 0.00
916 6 0.00
917 5 0.00
918 2 0.00
919 9 0.00
921 7 0.00
923 6 0.00
924 7 0.00
925 2 0.00
926 1 0.00
927 5 0.00
928 1 0.00
930 1 0.00
932 6 0.00
933 9 0.00
934 4 0.00
935 2 0.00
936 5 0.00
937 4 0.00
938 10 0.00
939 7 0.00
940 3 0.00
941 1 0.00
942 4 0.00
943 2 0.00
944 4 0.00
946 6 0.00
947 2 0.00
948 1 0.00
949 4 0.00
950 8 0.00
951 1 0.00
952 3 0.00
953 9 0.00
954 1 0.00
955 8 0.00
956 5 0.00
957 1 0.00
958 4 0.00
959 6 0.00
960 2 0.00
961 3 0.00
962 10 0.00
963 1 0.00
964 3 0.00
965 2 0.00
967 9 0.00
968 3 0.00
969 1 0.00
970 5 0.00
971 4 0.00
972 7 0.00
973 2 0.00
974 5 0.00
975 4 0.00
976 6 0.00
977 7 0.00
979 9 0.00
980 18 0.00
981 22 0.00
982 36 0.00
983 22 0.00
984 23 0.00
985 9 0.00
986 9 0.00
987 19 0.00
988 29 0.00
989 32 0.00
990 42 0.00
991 23 0.00
992 25 0.00
993 19 0.00
994 2 0.00
995 13 0.00
996 8 0.00
997 11 0.00
998 7 0.00
999 14 0.00
1000 3 0.00
1001 6 0.00
1002 9 0.00
1003 14 0.00
1004 20 0.00
1005 7 0.00
1006 24 0.00
1007 18 0.00
1008 17 0.00
1009 45 0.00
1010 8 0.00
1011 5 0.00
1012 26 0.00
1013 8 0.00
1014 15 0.00
1015 8 0.00
1016 16 0.00
1017 30 0.00
1018 8 0.00
1019 3 0.00
1020 3 0.00
1021 1 0.00
1022 2 0.00
1023 8 0.00
1024 513 0.03
1025 484 0.03
1026 668 0.04
1027 439 0.03
1028 422 0.02
1029 388 0.02
1030 613 0.04
1031 520 0.03
1032 457 0.03
1033 335 0.02
1034 493 0.03
1035 348 0.02
1036 463 0.03
1037 579 0.03
1038 367 0.02
1039 325 0.02
1040 311 0.02
1041 360 0.02
1042 352 0.02
1043 287 0.02
1044 381 0.02
1045 227 0.01
1046 191 0.01
1047 241 0.01
1048 231 0.01
1049 233 0.01
1050 260 0.02
1051 445 0.03
1052 806 0.05
1053 320 0.02
1054 921 0.05
1055 658 0.04
1056 1032 0.06
1057 337 0.02
1058 205 0.01
1059 611 0.04
1060 656 0.04
1061 148 0.01
1062 550 0.03
1063 244 0.01
1064 146 0.01
1065 183 0.01
1066 150 0.01
1067 392 0.02
1068 136 0.01
1069 185 0.01
1070 90 0.01
1071 319 0.02
1072 84 0.00
1073 277 0.02
1074 221 0.01
1075 120 0.01
1076 75 0.00
1077 97 0.01
1078 261 0.02
1079 645 0.04
1080 117 0.01
1081 448 0.03
1082 185 0.01
1083 572 0.03
1084 92 0.01
1085 75 0.00
1086 429 0.02
1087 1275 0.07
1088 94 0.01
1089 22 0.00
1090 43 0.00
1091 27 0.00
1092 38 0.00
1093 47 0.00
1094 27 0.00
1095 33 0.00
1096 40 0.00
1097 56 0.00
1098 32 0.00
1099 28 0.00
1100 35 0.00
1101 33 0.00
1102 25 0.00
1103 31 0.00
1104 24 0.00
1105 13 0.00
1106 14 0.00
1107 12 0.00
1108 8 0.00
1109 4 0.00
1110 4 0.00
1111 7 0.00
1112 13 0.00
1113 8 0.00
1114 13 0.00
1115 25 0.00
1116 24 0.00
1117 3 0.00
1118 8 0.00
1119 4 0.00
1120 5 0.00
1121 11 0.00
1122 7 0.00
1123 9 0.00
1124 5 0.00
1125 8 0.00
1126 3 0.00
1127 8 0.00
1128 9 0.00
1129 8 0.00
1130 9 0.00
1131 12 0.00
1132 11 0.00
1133 1 0.00
1135 2 0.00
1136 10 0.00
1137 1 0.00
1138 1 0.00
1139 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (902 bp):
GGTTGCAGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
CATCCTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGC
ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
TTCCGAAAAAATTTTAAAAAATCCAGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAAC
GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
AAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTC
GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGACCGGACCGAG
Found at i:16015476 original size:26 final size:26
Alignment explanation
Indices: 16015440--16015492 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16015430 GTTGACTTAG
* *
16015440 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16015466 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16015492 G
1 G
16015493 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16018131 original size:26 final size:26
Alignment explanation
Indices: 16018095--16018147 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16018085 GTTGACTTAG
16018095 GCATACAGAGTCCATTCCCAGTCTAA
1 GCATACAGAGTCCATTCCCAGTCTAA
* *
16018121 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTCCATTCCCAGTCTAA
16018147 G
1 G
16018148 ACCGAACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.28, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACAGAGTCCATTCCCAGTCTAA
Found at i:16019021 original size:26 final size:26
Alignment explanation
Indices: 16018985--16019037 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16018975 GTTAACTTAG
*
16018985 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
* *
16019011 GCATACAGAGTTCATTCGCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
16019037 G
1 G
16019038 ATTGGGCCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:16019923 original size:26 final size:26
Alignment explanation
Indices: 16019887--16019939 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16019877 GTTGACTTAG
16019887 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16019913 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16019939 G
1 G
16019940 ATCGGATCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16023302 original size:26 final size:26
Alignment explanation
Indices: 16023272--16023324 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16023262 GTTGACTTAG
16023272 GCATACAAAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
** **
16023298 GCATACGGAGTTCATTCGTAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
16023324 G
1 G
16023325 ATCAGACCAG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAAAGTTCATTCCCAGTCTAA
Found at i:16026770 original size:26 final size:26
Alignment explanation
Indices: 16026740--16026795 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
16026730 TGGGTTGACT
* *
16026740 TAAGCGTACGAAGTTCATTCCTAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
*
16026766 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
16026792 TAAG
1 TAAG
16026796 ATTGGATTGG
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.29, C:0.23, G:0.20, T:0.29
Consensus pattern (26 bp):
TAAGCATACGAAGTTCATTCCCAGTC
Found at i:16027677 original size:26 final size:26
Alignment explanation
Indices: 16027640--16027692 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16027630 GTTGACTTAG
*
16027640 GCATACGTAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16027666 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16027692 G
1 G
16027693 ATCAAACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16029472 original size:26 final size:26
Alignment explanation
Indices: 16029442--16029494 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16029432 GTTGACTTAG
16029442 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16029468 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16029494 G
1 G
16029495 ATCAAACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16031276 original size:26 final size:26
Alignment explanation
Indices: 16031246--16031298 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16031236 GTTAACTTAG
*
16031246 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16031272 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16031298 G
1 G
16031299 ATCAAACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16032181 original size:26 final size:26
Alignment explanation
Indices: 16032142--16032191 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
16032132 GACTTAGGCA
*
16032142 TACGGAGTTAATTCCCGGTCTAAGCG
1 TACGGAGTTAATTCCCAGTCTAAGCG
* *
16032168 TACGGGGTTCATTCCCAGTCTAAG
1 TACGGAGTTAATTCCCAGTCTAAG
16032192 ATTGGATCAG
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.22, C:0.24, G:0.26, T:0.28
Consensus pattern (26 bp):
TACGGAGTTAATTCCCAGTCTAAGCG
Found at i:16033075 original size:26 final size:26
Alignment explanation
Indices: 16033038--16033090 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16033028 GTTGACTTAG
16033038 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
* *
16033064 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16033090 G
1 G
16033091 ATCAGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:16033736 original size:903 final size:901
Alignment explanation
Indices: 16025881--16033921 Score: 10509
Period size: 900 Copynumber: 9.0 Consensus size: 901
16025871 CGTTTTAACT
* * * * *
16025881 TAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGTGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* *
16025946 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCTGGGGCACCA---TC---G--T--CGGA
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCCCGGA
* *
16026001 GAACCTGACCGGCGGCATTAGGGTTCC-ACCGATC------G--GGGGGGTGTGCGCACAAGATG
131 GAACCTGACCGGCGGCATTGGGGTTCCGA-CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
* *
16026057 TGCGATGGTTGCTGGTACTTGAG-CCTTAT-TTGGCCCCCTATCCCTCATTAAACCTCGAGAACT
195 TGCGATGGGTGCTGGTACTTG-GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * * **
16026120 CACACCCTCTTAAAAAGCATTTGAGATTTTGCAGGTTTGCTGCTGGTAGCCATTAAAGTGTCTGA
259 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
16026185 TATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTT
324 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * *
16026250 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGTCGAAACGCCTTCCGAA
389 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAA
* *
16026315 AAAATTTTAAGAAATCCCAAACTGCAAAAAGTTTCAAAAATCGTG-AAAATAGAAAACGAGTCGT
454 AAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
16026379 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
519 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * * * *
16026444 GCATTGGCACGTAGAAATATGAAGATTTGCCTAAACCCACCTACCACCCTATCTATCCATGGCTT
584 GCATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * *
16026509 GCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGTCCTCCCGCCCT-CCCGTTCCAT
649 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CCG----CCCG-CCTGCTCGTTTCGT
* * * * * * * *
16026573 TGGTTGGCTTAGGTATACGGAGTTCATTCCCAATGTAAGATC-GAACCAAATCGAGGGTTGCGGT
708 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACTAGATCGAGGGTTGTGGC
* * * * *
16026637 AG-AGGATCGGCAGCACGCAGAGGGGGACTCGATCGATCCCCGGCTTTCGCATCTCGTCCCTCTG
772 AGCAGGATCAGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * * *
16026701 GTCGGCTGAGCGCCCGCGCGCTCATTTCATGGGTTGACTTAAGCGTACGAAGTTCATTCCTAGTC
837 GCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
** ** * *
16026766 TAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGATTGGACCGAGGGTAGAGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * ** ** *
16026831 GGGCTCGGGCATGTGCTGGGGCCACATTTTTCTTCACCAAGGTGCCATCGTCGGAACATCACCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
* * * *
16026896 AGAACCTGACCGGCTGCATTGGGGGTTCCAACGAT---------CAGAGGGTGTGCGCACATGAT
130 AGAACCTGACCGGCGGCATT-GGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGAT
* *
16026952 GTGCGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACT
194 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* *
16027017 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTAA
259 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
16027082 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
324 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * ** *
16027147 TTGTGCATGCCAAAAAAAATACAAGGATCACATCTACAAAGTTTGGGGGCCAAAAAGCCTCCTGA
389 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGGCCAAAACTCCTTCTGA
* ** *
16027212 AAAAATTTTAAAAAATCCCAAACCGCACAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCA
453 AAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* *
16027277 TCTTGCCTTGAAACTTCACGTGAAGGCTTGAGGGACCATTGTATGAATTTACAAGCCATAAAAAA
518 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAAA
*
16027342 TGGCATTGGCA--CATAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
582 TGGCATTGGCATGCA-GAAAA-ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * *
16027405 GCTTGGGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTCCGTC
645 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CCGCCCGCCTGCTCGTTTCGTC
* * * *
16027470 GATTGGCTTAGGTATACGGAGTTCATTCCCTGTCTAAGATCAGACTGGA-CTGAGGGTTGTGGCA
709 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATC-GAGGGTTGTGGCA
* * * * * ** *
16027534 ACAGGATCAGTAGTACGTAGAGGGGGACCC-AGCCGATCCCCATCTTGCGCATCCCGCCCTTCTG
773 GCAGGATCAGCAGCACGCAGAGGGGGACCCGA-TCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* *
16027598 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGTAGTTCATTCCCAGTC
837 GCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * **
16027663 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGGGGTAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * * *
16027728 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
* * * * ** *
16027793 AGAACCTGACTGACGGCTTTGGGGTTACGGTGATCGGGGGGGCCGGGGGGTGTGCGGACATGATG
130 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
* * *
16027858 TGCGATGGGTGCTAGTACTTGACCCTTATATTGGCCCCCTATCCCTCAACAAACCTCGAGAACTC
195 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
16027923 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGCAGCCATTAAAGTGTCTGAA
260 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
16027988 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTT
325 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * *
16028053 TGTGCATGCCAACAAAAATACAACGATCACGTCTACCAAGCTTGGGGCCAAAACTCCTTC-CAAA
390 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * * ** *
16028117 AAATTTTTAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTC
455 AAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * *
16028182 TTACC-TAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATTAATTTAGAAGCCATAAAAATG
520 TTGCCAT-GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
16028246 GCATTGACATGCA-AAAATATGAAGATGTCCCTAAACCCACCTAACACCCTATTGATCCACGGCT
584 GCATTGGCATGCAGAAAA-ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* *
16028310 TGCGCATCCCGTCTCTCTGGCCGACGTAGCAT-CCC-CCCGCC-CATCTG-CTCGCTCGTTTCGT
648 TGCGCATCCCGTCTCTCTGGCCGGCGTAG--TGCCCGCCCGCCGC--CCGCCT-GCTCGTTTCGT
* *
16028371 CGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGAT-AGGA-TCAGACCGAGGGTTGTGG
708 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA-GACT-AGATCGAGGGTTGTGG
* * * * *
16028434 CAGCTGGATCAGCAACACGCAGAGGGGGACCCGATCGATTCTCGGCTTACGCATCCCGCCCCTCT
771 CAGCAGGATCAGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * ** *
16028499 GGCTGGCTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATATGGAGTTCATTCCCAGT
836 GGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
16028564 C
901 C
* * * ** * * *
16028565 TATGCATACAGAGTTCATTCCAAGTCTAAGATTGGACCGAACCAAGGGTTGCGACAGTACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * *
16028630 GGGCTCGGGCATGTGCTAGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
* * * *
16028695 AGAACCTGACTGGCGGCATTGGGGTTCAGACGATCGGGGGGGCCGAGGGGTGTACGCACATGATG
130 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
* * *
16028760 TGTGATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTATCGCTCATCAAACCTCGAGAACTC
195 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
16028825 ACACCCACTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTGAAGTGTCTGAA
260 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
16028890 ATGGGGACACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
325 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
16028955 TGTGCTTGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTGCTGAAA
390 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* *
16029020 AAATTTTAAAAAATCCCAAACTGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTC
455 AAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
16029085 TTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAATG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAAATG
* * **
16029150 GCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACCACTT
584 GCATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * *
16029215 GCGCATCTCGTCTCTCTGGCCAGCGTAATGCTCG--C-CCGCCCGCCCGCTCG-TTCTATCGGTT
649 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCTGCTCGTTTC-GTCGGTT
* * * * *
16029276 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATAAGACTGGATCGAGGGTTGCGGTAGTAGG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATCGAGGGTTGTGGCAGCAGG
* * * * * * * *
16029341 ATCAACAGCACGGAGAGGGGAACCCGGTCGATCCCCGTCTTGCACATTCTGCCCCTCTGGCCGGC
778 ATCAGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
*
16029406 TGAGCGCCCCCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
843 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
16029465 TAAGCATACGGAGTTCATTCCTAGTCTAAGATCAAACTGGACCGAGGGTTGCGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * *
16029530 AGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCAGAGCATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
* * * * ** * * * * *
16029595 AGAGCCTGACCGACGGTATTGGGGTTGCGGTGATCGGGTGGACCGGAAGGGTGTGCGGACGTGAT
130 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGTGTGCGCACATGAT
* * *
16029660 GTGCGATGGGTGCTAGTACTTGACCCTTATATTGGCCCTCTATCCCTCAGT-AAACCTCGAGAAC
194 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA-TCAAACCTCGAGAAC
* *
16029724 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGCAGCCATTAAAGTGTCTG
258 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
16029789 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTT
323 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
16029854 TTTGTGCATGCCAACAAAAATACAACGATCACGTCTACCAAGCTTGGGGCCAAAACTCCTTC-CA
388 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGA
* * * *
16029918 AAAAAGTTTT-AAAAATCCCGAACCGTAAAAAGTGTT-GAAAATCATGAAAAATAGAAAACGAGT
453 AAAAA-TTTTAAAAAATCCCAAACCGCAAAAAGT-TTCAAAAATCGTGAAAAATAGAAAACGAGT
* * *
16029981 CGTCTTACCTTGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
516 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * * *
16030046 ATGGCATTGACATGCA-AAAATATGAAGATGTCCCTAAACCCACCTAACACCCTATTTGATCCAC
581 ATGGCATTGGCATGCAGAAAA-ATGAAGATGTGCCTAAACCCACCTACCACCCTA-TCGATCCAC
* * *
16030110 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGCAT-CCC-CCCGCTGATCCG-CTCGCTCGTTT
644 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG--TGCCCGCCCGCCG-CCCGCCT-GCTCGTTT
*
16030172 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-AGGA-TCAGACCGAGGGTTG
705 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA-GACT-AGATCGAGGGTTG
* * * * * * *
16030235 TGGAAGCTGGATCAGCAACACGCAGAGGGGGACCCGATCGATTCTCGGCTTACGCATCCTGCCCC
768 TGGCAGCAGGATCAGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCC
** * ** * * *
16030300 TCTGGCTAGCTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATATGGAGTGCGTTCCC
833 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCC
16030365 AGTC
898 AGTC
* * * ** * * *
16030369 TATGCATACAGAGTTCATTCCAAGTCTAAGATTGGACCGAACCAAGGGTTGCGACAGTACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * *
16030434 GGGCTCGGGCATGTGCTAGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
* * *
16030499 AGAACCTGACTGGCGGCATTGGGGTTCAGACGATCGGGGGGGCCGGGGGGTGTACGCACATGATG
130 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
* * *
16030564 TGTGATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTATCGCTCATCAAACCTCGAGAACTC
195 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
16030629 ACACCCACTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTGAAGTGTCTGAA
260 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
16030694 ATGGGGACACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
325 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * *
16030759 TGTGCTTGCCAACAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTGCTGAAA
390 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* *
16030824 AAATTTTAAAAAATCCCAAACTGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTC
455 AAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
16030889 TTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAATG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAAATG
* * * **
16030954 GCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACTCTATCGATCCACCACTT
584 GCATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
16031019 GCGCATCTCGTCTCTCTGGCCAGCGTAGTGCTCGCCCGCCAG--C-CC-GCTCG-TTCTGTCGGT
649 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCC-GCCCGCCTGCTCGTTTC-GTCGGT
* * * * *
16031079 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATAAGACTGGATCGAGGGTTGCGGTAGTAG
712 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATCGAGGGTTGTGGCAGCAG
* * * ** * * *
16031144 GATCAACAGCACGCAGAGGGGGACTCGGTCGATCCCCATCTTGCACATTCTGCCCCTCTGGCCGG
777 GATCAGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * *
16031209 CTGAGCGCCCCCACGCTCGTTTCATGGGTTAACTTAGGCATATGGAGTTCATTCCCAGTC
842 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
16031269 TAAGCATACGGAGTTCATTCCTAGTCTAAGATCAAACTGGACCGAGGGTTGCGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * *
16031334 AGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCAGAGCATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
* * * * ** * * *
16031399 AGAGCCTGACCGACGGTATTGGGGTTGCGGTGATCGGGTGGGCCGGAGGGGTGTGCGGACGTGAT
130 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGTGTGCGCACATGAT
* * *
16031464 GTGCGATGGGTGCTAGTACTTGACCCTTATATTGGCCCTCTATCCCTCAGT-AAACCTCGAGAAC
194 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA-TCAAACCTCGAGAAC
16031528 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
258 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
16031593 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCATGTACACTTCGAGTTTTTAGCTGAATTTT
323 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
16031658 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAATTACTTCCGA
388 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGA
* ** *
16031723 AAAAATTTTAAAAAATCCCAAACC-CCAAAA-TTTTGAAAATCCTGAAAAATAGAAAACGAGTCG
453 AAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
*
16031786 TCTTGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
518 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * *
16031851 GGCATTGGCATGCATAAATATGAAGATGTGCCCAAACCCACCTACCACCCTACCGATCCACGGCT
583 GGCATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
*
16031916 TGCGCATCCCGTCTCCCTGGCCGGCGTAGTGCCCG--C-CCG--C-CC-GCTCGTTTCGTCGGTT
648 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCTGCTCGTTTCGTCGGTT
* * * ** *
16031974 GGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGATTGGA-CTGAGGGTTGCAGCAGTAG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATC-GAGGGTTGTGGCAGCAG
* * * * *
16032038 GATC-GACAGCAGGCAGAGGGGGACCCAACCGATCCCCAGCTTGCCCATCCCGCCCCTCT-GCCG
777 GATCAG-CAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * * *
16032101 GCTGAGCTCCCGCATGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTAATTCCCGGTC
841 GCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * ** * * ** *
16032162 TAAGCGTACGGGGTTCATTCCCAGTCTAAGATTGGATCAGACCGAGGGTTATGCCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * *
16032227 GGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTTGCCAGGGCACCATCGTCGGAGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
** ** * *
16032292 AGAACCTGACCGGCGGCATCAGGGTTCCGGTGATC-GGGGGG-CAGGGGGTGTGCACACATGATG
130 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
* ** * *
16032355 TGTGATGGGCACTGGTACTTGGCTCTTATATT-GCCCCCTATCCCTCATCAAACCTCGGGAACTC
195 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
**
16032419 ACACCCCCTTAAAGAGCATTTGAGATTTTACAAATTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
260 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
16032484 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTGGCTTAATTTTTT
325 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * *
16032549 TGTGCATGCCAACAAAAATAAAAGGATCACGTCTACCAAGTTTTGGGGCAAAAACTCCTTCCGAA
390 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG-TTTGGGGCCAAAACTCCTTCTGAA
* * **
16032614 AAAATTTTAAAAAAT--CTAACCGAAAAAAGTTTTTAAAATCGTGAAAAATAGAAAACGAGTCGT
454 AAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
16032677 GTTGCCATGAAACTTCATGTGAAGGCTTAAGAGACCATTGTATGAATTTACAAGCCATAAAAATG
519 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
16032742 GGATTGGCACGCA-AAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCT
584 GCATTGGCATGCAGAAAA-ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
** * * *
16032806 TATGCATCTCATCTCTCTGGCTGGCGTAGTGCCCGCCCGCTCGCCCGCCTGCTCGTTTCGTCGGT
648 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGC-CGCCCGCCTGCTCGTTTCGTCGGT
* * * *
16032871 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATCAACGGCTATGGCAGCAG
712 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATCGAGGGTTGTGGCAGCAG
* * * * * * * * * *
16032936 GATCGGCAACATGCAAAGAGGGACTCGGTCGATCCCCGGCTTGGGCATCCCGCCCCTTTGGCTGG
777 GATCAGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * ** *
16033001 CTGAGAGCCTGCACGCCCGTTTCGGGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTC
842 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
16033061 TAAGCATACGGAGTTCATTCCTAGTCTAAGATCAGATCGGACCGAGGGTTGCGATAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * ** * *
16033126 AGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTTGGGGCAGCATCGTCGGAGCATCACTGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATC-CCGG
* * **
16033191 AGAACCTGACCGGCGACATTGAGGTTCCGACGATCGGGGGGGCCCTGGGGTGTGCGCACATGATG
130 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
* * *
16033256 TGCGATGGGTGCTGGTACTAGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCTAGAGAACTC
195 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * * * *
16033321 TCGCCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCTATTAAAGTGTCTGAA
260 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
16033386 ACGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
325 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * **
16033451 CGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGTGAAAACTCCTTCTGAAA
390 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * *
16033516 AAATTTTAAAAAATCCCAAACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGTC
455 AAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * * *
16033581 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATTTGCAAGACATCAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*
16033646 CATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCGCGGCTTG
585 CATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
16033711 CGCATCCCGTCTCTCTGGCTGGCGTAGTGCCCG--C-CCGCCCGCCCGCTCGTTTCGTCAGTTGG
650 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCTGCTCGTTTCGTCGGTTGG
* * * * * * * * *
16033773 CTTAGGCATACGAAGTTCGTTCCCAGTCTAGGATCAGAC-CGAACTGAGGGTGGCGCCAGCAAGA
715 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATC-GAGGGTTGTGGCAGCAGGA
** * * * * *
16033837 TTGGCAGCACGTAGAGGGGGACCCGATCGGTCCCCGGCTTGTGCATCTCGCCCCTCTGGCTGGCT
779 TCAGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
*
16033902 GAGCGCTCGCACGCTCGTTT
844 GAGCGCCCGCACGCTCGTTT
16033922 AGATTGGGAA
Statistics
Matches: 6249, Mismatches: 792, Indels: 216
0.86 0.11 0.03
Matches are distributed among these distances:
885 93 0.01
888 8 0.00
889 198 0.03
890 254 0.04
891 2 0.00
892 6 0.00
893 201 0.03
894 123 0.02
895 9 0.00
896 141 0.02
897 434 0.07
898 272 0.04
899 553 0.09
900 900 0.14
901 630 0.10
902 867 0.14
903 679 0.11
904 579 0.09
905 297 0.05
906 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (901 bp):
TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCT
GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCCCGGA
GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGT
GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
AATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
ATTGGCATGCAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCTGCTCGTTTCGTCGGTTGGC
TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATCGAGGGTTGTGGCAGCAGGATC
AGCAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
GCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
Found at i:16037964 original size:876 final size:876
Alignment explanation
Indices: 16034976--16040025 Score: 5648
Period size: 876 Copynumber: 5.7 Consensus size: 876
16034966 AAAAGAAAAT
* * * ** * *
16034976 CGTATGCCTAACTCAACCCACGAAACGAGCG-GTTGGGTGCTTAGTCGGCCAGAGGGGCAGAT-C
1 CGTATGCCTAAGTCAACCCACGAAACGAGCGTG-CGGGTGCTCAACCGGTCAGAGGGGCGGATGC
* ** * * * * *
16035039 GCCAG-CGGGGATCGGTC-GGTCCCTCTCTGGGTCGCTGCCGATCCTACTACCGCAAACCCTCGT
65 GCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGT-GCTGCCGATCCTGCTGCCGC-AACCCTCGG
* * * *
16035102 TC-GATGCTTAATCTTAGACTGGGAATGAA-TTCGTATGCCTAAGCCAACCGACGAAATGAACGG
128 TCTGAT-C-TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * * ** * * * *
16035165 GCGGGTGGGCGGCCGGGCACCACGCTAGCCAGAGAGATGGTATGTGCAATCCGTGGATCGATAGG
191 GCGGGTAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
* * *
16035230 GTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTACATGCCAATGACATTTTTGTGGCTTGTAA
256 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAA
* * *
16035295 ATTCATACAATGGTCCCTTAAGCCTTCACGCGAAGTTTCATGGCAAGATGAC-CTGTTTTCTATT
321 ATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC-GTTTTCTATT
** * * **
16035359 TTTCATAATTTTTGAAACTTTTTGCGGTTCGAGATTTTTAAAAAAATTTTCGGAAGGAGTTTTGG
385 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * * *
16035424 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTTAGTTAAAAT
450 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
16035489 CTCGAAGTGAACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
515 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
*
16035554 TACTGGCAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
580 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
16035619 GAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCC
645 GTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* ** * * * *
16035684 CCTGCCTTCCCGATTGTCGGAACCCCAATGCCGCCGATTC-GATTCTCCGGCAATGCTCC-AGTG
710 CCCGCCCCCCCGATCGTCGGAACCCCAATGCCGCCG-GTCAGGTTCTCCGGCAATGCTCCGA-CG
* * * * *
16035747 ATGGTGCCCCAACGAAGAAAAATGCTGCACCAGCACATGCCCGA-CCCAGCATGTGCTGACACAA
773 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* * * * * **
16035811 CCCTTGGTCCGGTCTGAT-CTTAGACCGAAAATGAACTC
838 CCCTCGATCCGATCCGATGCTTAGACTGGGAATGAACTC
* * * * * * *
16035849 CGTATGCCTAAGTCAACCAATGAAACGAACGTGCAGGTGCTCTACCGGTCGGAGGGGTAGGATGC
1 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGTCAGAGGGG-CGGATGC
** * ** * **
16035914 GCAAGCCGGGGATCGACCATGTCCCCCTCTGCGTTCTGTTGATCCTGCTGCTGCAACCCTCAATC
65 GCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC
* * * *
16035979 CGGTCTGATCTTAGAATGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGC--
130 TGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
*
16036042 --AGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
195 GTAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* **
16036105 TTGGTGGGTTTAGGCACATCTTCATATTTCTAGGTGCCAATGCCATTTTTATGGCTTGTAAATTC
260 TAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
16036170 ATAAAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
325 ATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* *
16036235 CAAATTTTGAAACTTTTTACGGTTCGAGA-TTTTTAAAACTTTTTTCGGAAGGAGTTTTGGCCCC
390 CGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCC
* * * * *
16036299 AAACTTGGCAGACGTGATCCTTATATTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAAATCG
454 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
*
16036364 AAGTGAACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCCATTTTCAGACACCTTTAATGGCT
519 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCCA-TTTCAGACA-CTTTAATGGCT
* *
16036429 ACTGGTAGC-AACCTGT-AAATC-CGAAATTCTCTTT-AGGGGGTGTGAGTTCTCGA-GTTTGAT
581 ACTGGCAGCAAACCTGTAAAATCTC-AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * * * * * * *
16036489 GAGAGATAGGGGGCCAGATATAAGGACCAAGTTCCATCACCCATCACACCTGATGTG-GCACA-C
645 GTGGGATAGGGGGCCA-ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * * * *
16036552 CCCTGCCTTCCCCAGATTACG-CGGAACCCCAATGGCCTCCGGTCCGATTCTCCCGGCAATGTTT
709 CCCCGCC--CCCCCGA-T-CGTCGGAACCCCAAT-GCCGCCGGTCAGGTTCT-CCGGCAATG-CT
* *
16036616 CCG-CGATGGTGCCCCGACGAAG-AAAATGTGGCACGCAGCACAT-CCCGAGCCCAGCATGTGCT
767 CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC-CAACACATGCCCGAGCCCAGCATGTGCT
* * * * ** *
16036678 GCCGAAACCCTCGTTCTTGATCCGATCCTTAGACCAGGAATAAACCTC
831 GCCGCAACCCTCGATC-CGATCCGATGCTTAGACTGGGAATGAA-CTC
* *
16036726 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGGGTGCTC-TCCGGTCGGA-GGGCAGGAT
1 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGC--GGGTGCTCAACCGGTCAGAGGGGC-GGAT
** * * * * *
16036789 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATGCTGCTGTCGCAACGCTTGG
63 GCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGG
** * *
16036854 TCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGC
128 TCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * * *
16036919 GGGTGGGCGGGCAGGCACTACGTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGT
193 GGGTAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
* *
16036984 GGTAGGTGGGTTTAGGCACATCTTCATACTTCTA-AGTGCCAATGCCATTTTTGTGGCTTGTAAA
258 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA-TGCCAATGCCATTTTTATGGCTTGTAAA
* * * *
16037048 TTCATACAATGGTCCCTCAAGCCTTCACATGGATTTTCATGGCAAGACGGCTCGTTTTCTATTTT
322 TTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* *
16037113 TCACGATTTTTGAATCTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAATGAGTTTTGGCC
387 TCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
*
16037178 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACT
452 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
16037243 GGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCACACACTTTAATGGCTA
517 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * *
16037308 CTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGTTCTCGAGGTTTGACGT
582 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGT
* *
16037373 GGGATAGGGAGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
647 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
** **
16037438 CGCCCCCCCGATCGTTAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGG
712 CGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCAATGCTCCGACGATGG
** * * * * *
16037503 TGCCCCGGTGAAGGAAAATGCGGCACCATCACATTCTCGAGCCCAACATGTGCTGCCGCAACCCT
777 TGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
16037568 CGATCCGATCCGAT-CTTAGACTGGGAATGAACTC
842 CGATCCGATCCGATGCTTAGACTGGGAATGAACTC
* * *
16037602 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACAGGCCAGAGGGGCGGCATGC
1 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGTCAGAGGGGCGG-ATGC
** * * * * * *
16037667 GCAAGTTGGGGATCGACCGGGTCCCCTTCTACGTGCTACCGATCCTACTGCCGCAACCATCGGTT
65 GCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC
* * * * * * *
16037732 TGGTCTGATCTTATACTGGGAATCAACTCCGTGTGCCTAAGCCAACTGACAAAATGAGCGGGCGG
130 TGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * ** * *
16037797 GTAGACGGGCGGACACTACGCCAACCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGA
195 GTAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
**
16037862 TAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTC
260 TAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * *
16037927 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTTGTTTTCTATTTTTCA
325 ATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * *
16037992 CGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCTA
390 CGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* * * * *
16038057 AACTTGGTAGACATGGTCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCAA
455 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
16038122 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACCCACTTTACATGAAGC
520 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA--CACTTTA-ATG--GC
* * * * *
16038187 TACTGGGCAGGCAAACTTTTTTAAAATCTCAAAATACTCTTTTAA-GGGTTGTGAGTTCTCAAGG
580 TACT-GGCA-GCAAAC--CTGTAAAATCTC-AAATGCTC-TTTAAGGGGGTGTGAGTTCTCGAGG
* *
16038251 TTGTGAGGT-GGATAGCGGGGCCAATATAAGGGCCAAGTCACCGGCACGCCATCGCACATCATGT
639 TT-TGATGTGGGATAG-GGGGCCAATATAAGGGCCAAGT-ACCAGCAC-CCATCGCACATCATGT
* * * * *
16038315 --G--CA--CCAC-ACCCCCCAATCATCGGAACCCCAATGCCGTCGGTCAGGTTCT-C--C-A--
700 GCGCACACCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCAATG
* * ** *
16038367 ----G-CGA---TGCTCCGATGAAGAAAAATGCGAAACCAACACATGCCCGTGCCCAGCATGTGC
765 CTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGC
* *
16038424 TACCGTAACCCTCGCTCTGATCCGATCTTAGACTGGGAATGAATATGCTTAGACTGGGAATGAAC
830 TGCCGCAA--C-C-CTC-GATCCGATC-----C-------G---ATGCTTAGACTGGGAATGAAC
*
16038489 TT
875 TC
* * * * * * **
16038491 CGTATGCATAAGTGAACCAATGAAACGAGCTGTCGGAGGGTGCTCAAACCGGTTAGAGGGATAGG
1 CGTATGCCTAAGTCAACCCACGAAACGAGC-GT--GCGGGTGCTC-AACCGGTCAGAGGG-GCGG
* * * * * *
16038556 ATACGCAAG-CTGGGATC-ATCGGGGTCCCCCTCTGCGTGCTGCTGATCCTACTGTCGCAACCCT
61 ATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
16038619 CAGTTTGATCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
125 C-----G----G----T---CT--G-AT---CT--G-AT-CTTAGACTGGGAATGAACTCCGTAT
* * *
16038684 GCCTAAGCCAACCGACGAAACGAGC--GAGAG--GGCGGGCGGGCACTACACCGGCCAGAGAGAC
164 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGTAGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
*
16038745 GGGATGCGCAAGCCGTGGATCGGTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
229 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
*
16038810 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
294 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTT
* * * * * * *
16038875 CATGGCAAGATGACTCGTTTTCTATTTTTTATGATTTCTGAAACTTTTTACGGTTAGGGATTTTG
359 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTT
* * *
16038940 TAAAATTTTTTCGGCAGGAGTTTTGGCCCCAAACTTGGTAGACGCGATCCTTGTACTTTTGTTGG
424 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* *
16039005 CATGAACACAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
489 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
16039070 GTCCCCATTTTAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTGA
554 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * *
16039135 GGGGGGGTGAGTTCTCAAGGTTTGATGTGGGATAGGGGGCCAACATAAGGGCCAAGTACTAGCAC
619 GGGGGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * ** *
16039200 CCATCGCACATCATATACGTACACCCCCCGGCCCCCCCGATCGTTGGAACCCCAATGCCATCAGT
684 CCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGT
** * * * *
16039265 CAGGTTCTCTAGCGATGCTCCGACGATGGTGCCTCGGCGAAGAAAAATGTGGCACCAACACATGC
748 CAGGTTCTCCGGCAATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGC
*
16039330 CCGAGCCCAGCATGTGCTGCCACAACCCTCGATCCGGTTTCCATCTTAGACTGGGAATGAATTCC
813 CCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G-----ATC-----C-------G-A-TCC
16039395 GTATGCTTAGACTGGGAATGAACTC
853 G-ATGCTTAGACTGGGAATGAACTC
* * * * * *
16039420 CGTATGACTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAACCGGCCAAAGGGACGGGATGT
1 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGTCAGAGGGGC-GGATGC
* * * *
16039485 GCAAGCCAGGGATCGACCGGGTCCCCTTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTTGGTC
65 GCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC
* ** * * *
16039550 TGACCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAGCGAGCGGGCGG
130 TGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
*** * * * * *
16039615 CCGGGCGGCCGGGCACTACGCTGGCTAGAGAGACGGGATGCGCAAGCCTTGGATCGATAAGGTGG
195 GTAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
** *
16039680 TAGGTGGGTTTAGGCACATCTTCATATTTCTACATGATAATGCAATTTTTATGGCTTGTAAATTC
260 TAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
16039745 ATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCGAGACGACTCGTTTTTTATTTTTCA
325 ATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * * *
16039810 TGATTTTTGAAACTTTTTACGGTTGGGGATTTTTTAAAATTCTTTCGGAAGGATTTTTGGGCCCA
390 CGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* * *
16039875 AGCTTGGTAGACGTGATCCTTCTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGA
455 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* * *
16039940 TGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCGCCATTTCAGACACTTTAATGGCTACTA
520 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* *
16040005 GTAGCCAACCTGTAAAATCTC
585 GCAGCAAACCTGTAAAATCTC
16040026 GAAGTGTACA
Statistics
Matches: 3554, Mismatches: 450, Indels: 315
0.82 0.10 0.07
Matches are distributed among these distances:
868 49 0.01
869 8 0.00
870 37 0.01
871 376 0.11
872 40 0.01
873 96 0.03
874 106 0.03
875 64 0.02
876 525 0.15
877 182 0.05
878 77 0.02
879 83 0.02
880 31 0.01
881 387 0.11
882 72 0.02
883 16 0.00
885 13 0.00
886 31 0.01
887 31 0.01
888 9 0.00
889 61 0.02
890 2 0.00
891 1 0.00
892 52 0.01
893 19 0.01
894 2 0.00
897 1 0.00
900 47 0.01
901 18 0.01
902 8 0.00
903 31 0.01
904 405 0.11
905 13 0.00
907 10 0.00
908 6 0.00
909 42 0.01
910 3 0.00
911 3 0.00
912 8 0.00
913 2 0.00
914 339 0.10
916 4 0.00
917 3 0.00
918 44 0.01
919 1 0.00
920 3 0.00
921 3 0.00
922 2 0.00
923 51 0.01
924 2 0.00
925 20 0.01
926 54 0.02
927 1 0.00
928 2 0.00
929 51 0.01
931 1 0.00
934 1 0.00
938 1 0.00
941 1 0.00
942 1 0.00
943 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (876 bp):
CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGTCAGAGGGGCGGATGCG
CAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCT
GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
TAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
AGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCA
TACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
GATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGTGGGA
TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCC
CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCAATGCTCCGACGATGGTGCC
CCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGAT
CCGATCCGATGCTTAGACTGGGAATGAACTC
Found at i:16038671 original size:26 final size:26
Alignment explanation
Indices: 16038633--16038685 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16038623 TTGATCTGAT
16038633 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16038659 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16038685 C
1 C
16038686 CTAAGCCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16039403 original size:26 final size:26
Alignment explanation
Indices: 16039374--16039425 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16039364 CGGTTTCCAT
*
16039374 CTTAGACTGGGAATGAATTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16039400 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16039426 ACTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16040040 original size:88 final size:88
Alignment explanation
Indices: 16039929--16040113 Score: 316
Period size: 88 Copynumber: 2.1 Consensus size: 88
16039919 AAAATTCAAC
* * *
16039929 TAAAAACTCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCGCCATTTCAGACACTTT
1 TAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
16039994 AATGGCTACTAGTAGCCAACCTG
66 AATGGCTACTAGCAGCAAACCTG
16040017 TAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
1 TAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
16040082 AATGGCTACTGGCAGCAAACCTG
66 AATGGCTACTAGCAGCAAACCTG
16040105 TAAAATCTC
1 TAAAATCTC
16040114 AAATGCTCTT
Statistics
Matches: 91, Mismatches: 6, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
88 91 1.00
ACGTcount: A:0.34, C:0.20, G:0.17, T:0.29
Consensus pattern (88 bp):
TAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTAGCAGCAAACCTG
Found at i:16040430 original size:26 final size:26
Alignment explanation
Indices: 16040353--16040432 Score: 142
Period size: 26 Copynumber: 3.1 Consensus size: 26
16040343 GGTCTGATCT
* *
16040353 TAGACTGGGAATGAACTTCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCC
16040379 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
16040405 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
16040431 TA
1 TA
16040433 AGTCAACCCA
Statistics
Matches: 52, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCC
Found at i:16040707 original size:159 final size:159
Alignment explanation
Indices: 16040418--16040716 Score: 359
Period size: 159 Copynumber: 1.9 Consensus size: 159
16040408 ACTGGGAATG
* *
16040418 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCGTAGCCGGCCAGAGGGGCGA
1 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCGTAACCAGCCAGAGGGGCGA
* * * * * * *
16040483 GATGCGCAAGCCGGGGATCGACCGGCTCCCATTCTTCGTGCTATCAATCTTGCTGCTGCAACCCT
66 GATCCGCAAGCCGGGGATCGACCGGCTCCCACTCTGCGAGCTACCAATCCTACTGCTGCAACCCT
*
16040548 CGGTCTGGTCAGATCTTAGACTAGGAAAA
131 CGATCTGGTCAGATCTTAGACTAGGAAAA
* * * *
16040577 AACTCTGTATGCTTAAGTCAACCCACGAAACGAGCGTGCGGGTGC-TCAACCAGCCAGCGGGGCG
1 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCGT-AACCAGCCAGAGGGGCG
* * ** * * * * *
16040641 GGATCCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGAGCTGCCGATCCTACTG-TCGCAGCC
65 AGATCCGCAAGCCGGGGATCGACCGGCTCCCACTCTGCGAGCTACCAATCCTACTGCT-GCAACC
16040705 CTCGATCTGGTC
129 CTCGATCTGGTC
16040717 TAAGGGCCAA
Statistics
Matches: 115, Mismatches: 23, Indels: 4
0.81 0.16 0.03
Matches are distributed among these distances:
158 2 0.02
159 113 0.98
ACGTcount: A:0.20, C:0.31, G:0.30, T:0.19
Consensus pattern (159 bp):
AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCGTAACCAGCCAGAGGGGCGA
GATCCGCAAGCCGGGGATCGACCGGCTCCCACTCTGCGAGCTACCAATCCTACTGCTGCAACCCT
CGATCTGGTCAGATCTTAGACTAGGAAAA
Found at i:16040959 original size:26 final size:26
Alignment explanation
Indices: 16040922--16040974 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16040912 CCAATCCGAT
* *
16040922 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACAGGGAATGAACTCTATATG
16040948 CTTAGACAGGGAATGAACTCTATATG
1 CTTAGACAGGGAATGAACTCTATATG
16040974 C
1 C
16040975 ATAAGTCAAA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCTATATG
Found at i:16042765 original size:25 final size:25
Alignment explanation
Indices: 16042731--16042778 Score: 96
Period size: 25 Copynumber: 1.9 Consensus size: 25
16042721 TCTGATCTTA
16042731 GACTGGGAATGAACTCCGTATGCTT
1 GACTGGGAATGAACTCCGTATGCTT
16042756 GACTGGGAATGAACTCCGTATGC
1 GACTGGGAATGAACTCCGTATGC
16042779 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.25, C:0.21, G:0.29, T:0.25
Consensus pattern (25 bp):
GACTGGGAATGAACTCCGTATGCTT
Found at i:16043821 original size:26 final size:26
Alignment explanation
Indices: 16043791--16043841 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16043781 GATTCGATCT
* *
16043791 TAGACTGGGAATGAAATTCGTATGCA
1 TAGACTGGCAATGAAATCCGTATGCA
*
16043817 TAGACTGGCAATGAACTCCGTATGC
1 TAGACTGGCAATGAAATCCGTATGC
16043842 CTAAGTCAAA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.18, G:0.25, T:0.25
Consensus pattern (26 bp):
TAGACTGGCAATGAAATCCGTATGCA
Found at i:16044689 original size:26 final size:26
Alignment explanation
Indices: 16044658--16044710 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16044648 TCGGTATGAT
16044658 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16044684 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16044710 C
1 C
16044711 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16044690 original size:895 final size:873
Alignment explanation
Indices: 16043041--16047139 Score: 5043
Period size: 892 Copynumber: 4.6 Consensus size: 873
16043031 CTTGTCTGCG
* * * * * *
16043041 TGCTGCCGCAACCCTTGGTCTGGTCCAATCTTACACTAGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGTCGCAACCCTCGGTCTGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16043106 CCGAAGAAACGAGCGGGCGGGCGGGCGTGCAGGCACTACGTCGGCTAGAGAGACGGGATGCGCAA
66 CCGACGAAAC-A---AGCGGGCGGGC--G-A-GCACTACGTCGGCCAGAGAGACGGGATGCGCAA
*
16043171 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCA
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
16043236 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAGGGCAAGAT
188 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * **
16043301 GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTTGAAATTTTTTAAAATTTTTT
253 GACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * * *
16043366 CGAAAAGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGTACAAAA
317 CGGAAGGATTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* ** *
16043431 AAATTCAGCTAAGAACTCGAAGTGTACAAGATTTTGTCG-CCATTTTTAAAACGTGTCCCCATTT
382 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT-GACCATTTGAAAAAAGTGTCCCCATTT
16043495 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTAACGGGGGTGTG
446 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTG
*
16043559 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAAGTATCAGCACCCATCGCAC
510 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCC-----------CCA--ATCAGCA-CCAT--C-C
* * *
16043624 ATGATGTGCGCAC-ACCCCCTCGACTCCCCCGATCGCCAGAAACCCAATGCCGCCGGTCAGGTTC
558 ATGATGTGCGCACAACCCCC-CGACCCCCCCGATCGTCGGAAACCCAATGCCGCCGGTCAGGTTC
* * ** ** *
16043688 TCCGGCGATGCTCTAGCGATGGTGCCCCGACGAAGAAAAATGTGGCACTGACACATGCCTGAGCC
622 TCCGACGATG--CTGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCGAGCC
** *
16043753 CAGCATGTGCTGTCACAACCCTCGGTCTGATTCGATCTTAGACTGGGAATGAAATTCGTATGCAT
685 CAGCATGTGCTACCGCAACCCTCGGTCTG-TTCGATCTTAGACTGGGAATGAAATTCGTATGC-T
** * * *
16043818 AGACTGGCAATGAACTCCGTATGCCTAAGTCAAAACACGAAACGAGCGTATGGATGCTCAGTCGG
748 AGACTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTATGGGTGCTCAGCCAG
* * ** *
16043883 CCAGAGGGGTGAGATGCACAAGCCGGGGTTCACCCTGGTCCCACTCTGCGTGCTACCGATCC
813 CCAGAGGGGCGAGATGCGCAAGCCGGGGTT-GGCCGGGTCCCACTCTGCGTGCTACCGATCC
* * * * *
16043945 TGCTGCCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTTAGCCAA
1 TGCTGTCGCAACCCTCGGTCTGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16044010 CTGACGAAACAAGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCATGGA
66 CCGACGAAACAAGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
16044075 TCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* * * *
16044140 GCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCTTGCCAAGACGACCCGTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * *
16044205 TTCTATTTTTCATGATTTTGAAACTTTTTTCGGTTCGAGATTTTTTATAATTTTTTCGAAAGGAT
261 TTCTATTTTTCATGATTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAT
* *
16044270 TTCTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
326 TTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
16044335 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTT
391 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * **
16044400 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCTACA
456 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
16044465 TTTGATGAGGGATAGGGGG-CCC-ATC-GCA-CAT-CATG-T-T-CGCA-AACCCCCCGACCCCC
521 TTTGATGAGGGATAGGGGGCCCCAATCAGCACCATCCATGATGTGCGCACAACCCCCCGACCCCC
* *
16044521 CCGATTGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTATGGCGATGGTGCCCCG
586 CCGATCGTCGGAAACCCAATGCCGCCGGTCAGGTTCTCCGACGATGC--TGGCGATGGTGCCCCG
* * * * * * *
16044586 ACGAAGAAAAATACGGCACCAACACATGACTGAGCCCAGCATGTGCTGCTGCAACCCTATGTTCG
649 ACGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCT-CGGTCT
* * *
16044651 GTAT-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
713 GT-TCGATCTTAGACTGGGAATGAAATTCGTATGC-TAGACTGGCAATGAACTCCGTATGCCTAA
* * * *
16044715 GTCAACCCATGAAACGAGCGTGTGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGG
776 GTCAACCCACGAAACGAGCGTATGGGTGCTCAGCCAGCCAGAGGGGCGAGATGCGCAAGCC-GGG
* * * * **
16044780 ATTGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
840 GTTGGCCGGGTCCCACTCTGCGTGCTACCGATCC
* * * * * ** *
16044814 TGCTGTCACAACCCTTGGTCCGATCTAATCTTAGACTGGGGATGAAGTAAGTATGCGTAAGCCAA
1 TGCTGTCGCAACCCTCGGTCTGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ***
16044879 CCGACGAAACGAGCGGGCGGGTGGGCGGGCGGGCACTATACCGGCCAGAGAGACGGGATGCGCAA
66 CCGACGAAAC-A---AGC----GGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
* * **
16044944 GTCGTGGATCGATAGGGTGGTAGTTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
16045009 TTTTTATGGCTTGCAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
188 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
16045074 GACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTT
253 GACTCGTTTTCTATTTTTCATGA-TTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * *
16045139 TGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCCCAAAA
317 CGGAAGGATTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * ** *
16045204 AAATTCAGCTAAAAACTCGAAGAGTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCCACATA
382 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
16045269 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAGCTCAAATGCACTTAAAGGGGGTGTGAG
447 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
16045334 TTTTCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
512 TTCTCGAGGTTTGATGAGGGATAGGGGGCC----------CCAA-T--CAGCA-CCAT--C-CAT
* *
16045399 GATGTGCGCACACCCCCCCGACCCCCCCGATCG-CAGGAAACCCAATGCCGTCGGTCAGGTTCT-
560 GATGTGCGCACAACCCCCCGACCCCCCCGATCGTC-GGAAACCCAATGCCGCCGGTCAGGTTCTC
* *
16045462 ---C----C-GGCGATGGTGCCCCGACGAAGAAAAATGCAGCA-CAACACATGCCCGAGCCCAGC
624 CGACGATGCTGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGC
* * * * * * *
16045518 ATGTACTACCGCGACCCTCCGTCCGGTCTGATCTTAGACTGGGAATCAACTTCGTATGCTTAGAC
689 ATGTGCTACCGCAACCCTCGGTCTGTTC-GATCTTAGACTGGGAATGAAATTCGTATGC-TAGAC
* * * *
16045583 TGGGAATTAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGTGCTCAGCCAGCCAG
752 TGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTATGGGTGCTCAGCCAGCCAG
* * * * *
16045648 AGGGGTGGGATGCGTAAGCCCGGGGATTGGCCGGGTCCCCCTC-GCGTGCTGCCGATCC
817 AGGGGCGAGATGCGCAAG-CCGGGG-TTGGCCGGGTCCCACTCTGCGTGCTACCGATCC
* * * * *
16045706 TGCTGTGGCAACCCTCGGT-TCGATGTGATCTTAGACTGGGAATGAACTCCATATGCCTAATCCA
1 TGCTGTCGCAACCCTCGGTCT-GATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * *
16045770 ACCGACGAAATGAGCGGGCAGGCAGGCGGGCAGGCACTATGTTGACTAGAGAGACGGGATGCGCA
65 ACCGACGAAACAAGCGGGC--G--GGC--G-A-GCACTACGTCGGCCAGAGAGACGGGATGCGCA
* *
16045835 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
122 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
*
16045900 ATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
187 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
16045965 CGACTTGTTTTCTATTTTTCACGATTTTCAAAACTTTCTGCGGTTCGGGATTTTTTAAAATTTTT
252 CGACTCGTTTTCTATTTTTCATGATTTT-AAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
* * *
16046030 TGGGAAGGAGTAT-TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCTCAA
316 TCGGAAGGA-TTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
16046094 AAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATT
380 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
16046159 TCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTG
445 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
16046224 AGTTCTTGAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATAGCAC
510 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCC----------CC-A--ATCAGCA-CCAT--C-C
* * * * *
16046289 ATCATGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCT
558 ATGATGTGCGCACAACCCCCCGACCCCCCCGATCGTCGGAAACCCAATGCCGCCGGTCAGGTTCT
* * * *
16046354 TCGACGATGCT-CCGATGGTGCCCCGATGAAGAAAAATACGGCACCGACACATGCCCGAGCCCAG
623 CCGACGATGCTGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAG
* * * * * *
16046418 CATGTGCTACCGTAACCCTCGGTCTGGTCCGATCTTAGA-TTGGAATGAACTCCGTATGCTTGAC
688 CATGTGCTACCGCAACCCTCGGTCT-GTTCGATCTTAGACTGGGAATGAAATTCGTATGCTAGAC
* * * * *
16046482 TGGCAATGAACTCTGTATACCTAAGTTAACCCACGAAATGAGCGTGTGGGTGCTCAGCCAGCCAG
752 TGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTATGGGTGCTCAGCCAGCCAG
* * * * *
16046547 AGGGGCGAGATGCGTAAGCCGGGGATCGGCCTGGTCCCACTTTGTGTGCTACCGATCC
817 AGGGGCGAGATGCGCAAGCCGGGG-TTGGCCGGGTCCCACTCTGCGTGCTACCGATCC
* * *
16046605 TGCTGTCGCAACCCTCAGCCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGTCGCAACCCTCGGTCTGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16046670 TCGACGAAACGAGCGGGCGGGCGAGCACTACGTCGGCAAGAGAGACGGGATGCGCAAGCCGTGGA
66 CCGACGAAACAAGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
*
16046735 TCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* ** * * * *
16046800 GCTTGTAAATCCATACAATGGTCCCTTAAGCCTTCAAATGAAGTTTCTTGGCAAGATGACCCATT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* *
16046865 TTCTATTTTTCATGATTTCTGAATCTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
261 TTCTATTTTTCATGATTT-TAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* * * * *
16046930 TTTCTGGTCCCAAACATGGTAGATGTGATCCTTGTATTTTTGTTCGCATGCACAAAACAATTCAG
325 TTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* *
16046995 CTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTT
390 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
*
16047060 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAG
455 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
16047125 GTTTGATGAGGGATA
520 GTTTGATGAGGGATA
16047140 AAGGGCCAAT
Statistics
Matches: 2811, Mismatches: 306, Indels: 169
0.86 0.09 0.05
Matches are distributed among these distances:
867 1 0.00
869 308 0.11
870 21 0.01
871 1 0.00
872 1 0.00
873 6 0.00
877 181 0.06
878 238 0.08
879 4 0.00
880 3 0.00
883 1 0.00
884 4 0.00
886 1 0.00
888 5 0.00
889 2 0.00
890 5 0.00
891 412 0.15
892 716 0.25
893 55 0.02
894 5 0.00
895 239 0.09
896 187 0.07
897 2 0.00
898 21 0.01
899 160 0.06
900 62 0.02
901 49 0.02
902 3 0.00
903 6 0.00
904 112 0.04
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (873 bp):
TGCTGTCGCAACCCTCGGTCTGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACAAGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAT
TTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCCCAATCAGCACCATCCATGATGTGCGCACAACCCCCCGACCCCC
CCGATCGTCGGAAACCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTGGCGATGGTGCCCCGAC
GAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCTGTT
CGATCTTAGACTGGGAATGAAATTCGTATGCTAGACTGGCAATGAACTCCGTATGCCTAAGTCAA
CCCACGAAACGAGCGTATGGGTGCTCAGCCAGCCAGAGGGGCGAGATGCGCAAGCCGGGGTTGGC
CGGGTCCCACTCTGCGTGCTACCGATCC
Found at i:16045586 original size:26 final size:26
Alignment explanation
Indices: 16045550--16045602 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16045540 CCGGTCTGAT
*
16045550 CTTAGACTGGGAATCAACTTCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
16045576 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16045602 C
1 C
16045603 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:16048084 original size:26 final size:26
Alignment explanation
Indices: 16048047--16048102 Score: 76
Period size: 26 Copynumber: 2.2 Consensus size: 26
16048037 GTGCTACCGC
* * *
16048047 ATGCTTAGACTGGGACTAAACTTCAT
1 ATGCTTAAACTGGGAATAAACTCCAT
*
16048073 ATGCTTAAACTGGGAATGAACTCCAT
1 ATGCTTAAACTGGGAATAAACTCCAT
16048099 ATGC
1 ATGC
16048103 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.20, G:0.20, T:0.29
Consensus pattern (26 bp):
ATGCTTAAACTGGGAATAAACTCCAT
Found at i:16048982 original size:26 final size:26
Alignment explanation
Indices: 16048953--16049003 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16048943 CCGATTCGAT
16048953 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
* *
16048979 CTTAGATTGGGAATGAACTCCGTAT
1 CTTAAACTGGGAATGAACTCCGTAT
16049004 TCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.24, T:0.29
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:16049871 original size:26 final size:26
Alignment explanation
Indices: 16049842--16049894 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16049832 CCGATCTGAT
16049842 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
* *
16049868 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16049894 C
1 C
16049895 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:16050765 original size:26 final size:26
Alignment explanation
Indices: 16050727--16050779 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16050717 CCGATCCGAT
16050727 CTTAGACTAGGAATGAACT-TCGTATG
1 CTTAGACTAGGAATGAACTCT-GTATG
*
16050753 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
16050779 C
1 C
16050780 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCTGTATG
Found at i:16051682 original size:26 final size:26
Alignment explanation
Indices: 16051632--16051682 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16051622 CCAATCCAAT
* * *
16051632 CTTAGACTTGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAAATCCGTATG
16051658 CTTAGACTAGGAATGAAATCCGTAT
1 CTTAGACTAGGAATGAAATCCGTAT
16051683 ATTCCTAAGT
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.16, G:0.22, T:0.31
Consensus pattern (26 bp):
CTTAGACTAGGAATGAAATCCGTATG
Found at i:16052571 original size:26 final size:26
Alignment explanation
Indices: 16052542--16052594 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16052532 CCAGTCCGAT
*
16052542 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16052568 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16052594 C
1 C
16052595 CTAAGTCAAT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Done.