Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 106 of 190
Found at i:16573789 original size:26 final size:26
Alignment explanation
Indices: 16573752--16573804 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16573742 GTTAACTTAG
*
16573752 GCATATGGAGTTCATTCCCAATCTAA
1 GCATATGAAGTTCATTCCCAATCTAA
*
16573778 GCATATGAAGTTCATTCCCAGTCTAA
1 GCATATGAAGTTCATTCCCAATCTAA
16573804 G
1 G
16573805 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.23, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATATGAAGTTCATTCCCAATCTAA
Found at i:16574686 original size:26 final size:26
Alignment explanation
Indices: 16574656--16574708 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16574646 GTTGACTTAG
16574656 GCATACGAAGTTCATACCCAGTCTAA
1 GCATACGAAGTTCATACCCAGTCTAA
* *
16574682 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATACCCAGTCTAA
16574708 G
1 G
16574709 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.32, C:0.25, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATACCCAGTCTAA
Found at i:16575587 original size:26 final size:26
Alignment explanation
Indices: 16575551--16575604 Score: 108
Period size: 26 Copynumber: 2.1 Consensus size: 26
16575541 TGGGTTGACT
16575551 TAGGCATACGGAGTTCATTCCCAGTC
1 TAGGCATACGGAGTTCATTCCCAGTC
16575577 TAGGCATACGGAGTTCATTCCCAGTC
1 TAGGCATACGGAGTTCATTCCCAGTC
16575603 TA
1 TA
16575605 AGATCGGACC
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.24, C:0.26, G:0.22, T:0.28
Consensus pattern (26 bp):
TAGGCATACGGAGTTCATTCCCAGTC
Found at i:16579643 original size:901 final size:889
Alignment explanation
Indices: 16577491--16580461 Score: 3853
Period size: 901 Copynumber: 3.3 Consensus size: 889
16577481 GGTCGGAGCA
* *
16577491 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
1 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
16577556 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
66 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
16577621 TCTTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGT
131 TC-TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * **** * * *
16577685 ACCAGCACCCATCGCACATCATGTGCGTACACCCCCCAGCCCCCCCGATTGTGGGAATCCTAACA
195 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCAATCACCGGAACCCCAACG
* * * * ** * *
16577750 TCGTCGGTCAGGTTCTCTGGTGATGCTCCGGCAAT-GTGCCCCGACGTAGAAAAATGCAGCACCA
260 CCGCCGGTCAAGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCA
* * * * * * * *
16577814 GCACATGCCCGAGCCTAGCATATGCTACCGTAACCCTCAGTCTGTTTGATCTTAGACTGGAAATG
325 GCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGTCTGATCTTAGACTGGGAATG
*** * *
16577879 AACTCCGTATGCTTAGACTATCAATGAACTCCGTATGCCTATGTCAACCCACGAAATTA-GTGCA
390 AACTCCGTATGCTTAGAC--T-AATGAACTTTATATGCCTAAGTCAACCCACGAAATTACGTG-G
* * * * *
16577943 GGCACTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCAGGGATCGGATGAGTCCCACTCTGCGTG
451 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC-GACGGGTCCC-CTCTACGTG
* * *
16578008 CTGCCGATCCTGCTGCCACAACCCTTGGTCTGG-TCTGATCTTAGACTGGGAATGAACTCCGCAT
514 CTGCTGATCCTGCTACCACAACCCTTGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTAT
* * *
16578072 GCCTAAGCCAACCGATGAAATGAGCGGGCGAGTAGACGAGCAGGCGGGTGGGCACTACGCTGTCC
578 GCCTAAGCCAACCGACGAAACGAGCGGGCG-G--G-C--G--GGC----GGGCACTACGCAG-CC
* * *
16578137 AGAGAGACGGGATGTGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGTCACATCTTCATA
630 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* * * *
16578202 TTTTTGAATGCCAATGCCATTTTTATGCCTTGTAGATTCATACAATGGT-CCTCTAAGCCTTCAC
695 TTTCTGAGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT-TAAGCCTTCAC
* * *
16578266 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTAAGATTTTTGAAATTTTTTGCGGTTC
759 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTGCGGTTC
** **
16578331 GGGATTTTTTAAAATTTTTT-GGAAGGGAGTTTTGGCAACAAACTTGGTAGATGTGATCCTTGTA
823 GGGATTTTTTAAAATTTTTTCGGAA-GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA
16578395 TTT
887 TTT
* * * *
16578398 TTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTTGAAGTGTAAAAGATTTTGCGACCATTTGA
1 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
16578463 AAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATAC
66 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
16578528 TCTTTAAGGGGGTGTGAGTACTCGAGGTTTGATGAGGGGTA---GGTCAATATAAGGGCCAAGTA
131 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
16578590 CCAGCACCAATCACACATCATGTACGCACACCTCCCCCCGGCCCCCCCGATCATCAGAACCCCAA
196 CCAGCACCCATCGCACATCATGTGCGCACA---CCCCCCGGCCCCCCCAATCACCGGAACCCCAA
* * * * * *
16578655 CGCCACCGGTCAGGTTCTTCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCAC
258 CGCCGCCGGTCAAGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCAGCAC
* * *
16578720 TAGCACATGCCTGAGTCCAGCATGTGCTGCCGCAACCCTCAGTCCGATCTAATCTTAGACTGGGA
323 CAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCG-TCTGATCTTAGACTGGGA
*
16578785 ATGAACTCCGTATGCTTAGACTGGGAATGAACTTTATATGCCTAAGTCAACCCACGAAATGAGCG
387 ATGAACTCCGTATGCTTAGACT---AATGAACTTTATATGCCTAAGTCAACCCACGAAATTA-CG
* *
16578850 TGTGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAG-CTGAGGATCGACCGGGTCACCCTCT
448 TG-GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGATCGA-CGGGTC-CCCTCT
* * * *
16578914 CCGTGGTGCTGATCCTGCTACCGCAACCCTTGGTCTGGTTCAATCTTAGACTGGGAATGAACTCC
509 ACGTGCTGCTGATCCTGCTACCACAACCCTTGGTCTGGTTCGATCTTAGACTGGGAATGAACTCC
* * *
16578979 GTTTGCCTAAGCTAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAAAC
574 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG-CAGCCAGAGAGAC
* * * *
16579044 GGGATGCGTAAGCCGTGTATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGTG
638 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGAG
*
16579109 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTT
703 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * *
16579174 CATGGCAAGACGACTCGTTTTTCTATTTTTCACGATTTTCGAAGCTTTTTACGCTTCGGGATTTT
768 CATGGCAAGACGACTCG-TTTTCTATTTTTCACGATTTT-GAAACTTTTTGCGGTTCGGGATTTT
16579239 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
831 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
* * * *
16579298 TTGTTGGCATGCACAAAACAATTCATCTAAAAACTCGATGTGTACATGATTTTGTGACCATTTGA
1 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-
* *
16579363 AAAAAAGTGTCCCTATTTCAGACACTTTATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
65 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
16579428 CTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
130 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
16579493 ACCAGAACCCATCGCACATCATGTGCGCACACCCCCGCGG-CCCCTCAATCACCGGAACCCCAAT
195 ACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCAATCACCGGAACCCCAAC
* *
16579557 GCCGCCGGTCAAGTTCTCCGACGACGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCAGCACC
259 GCCGCCGGTCAAGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACC
* *
16579622 AGCACATGTCTGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAA
324 AGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCC-GTCTGATCTTAGACTGGGAA
* * *
16579687 TGAACTCCGTATGC-----CTAA-G----TTA-A--CCCACG--AA---ACGAGATTAC---GGG
388 TGAACTCCGTATGCTTAGACTAATGAACTTTATATGCCTAAGTCAACCCACGAAATTACGTGGGG
* ** * *
16579731 CGCTCAGTCGGCCAGAGGGATGGGATGCGTAAGCCAGGGATCGATCGGGTCCCCCTCTACATGCT
453 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGA-CGGGT-CCCCTCTACGTGCT
* * *
16579796 G-TCGATCCTGCTACAACAACCCTTGGTCTGGTAT-GATCTTAGACTAGGAATGAACTCCGTCTG
516 GCT-GATCCTGCTACCACAACCCTTGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATG
*
16579859 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGTGGGCGGGCGGGCACTACGTCGGCGC-GAG
579 CCTAAGCCAACCGACGAAACGA----GCGGGC----GGGCGGGCGGGCACTACG-CAGC-CAGAG
16579923 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
634 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
*
16579988 T-ACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCACGTGA
699 TGA-GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
*
16580052 AGTTTCAAGGCAAGAC-ACTCGTTTTCTATTTTTCACGGATTTTGAAACTTTTTGCGGTTCGGGA
763 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC-GATTTTGAAACTTTTTGCGGTTCGGGA
*
16580116 TTTTTTAAAATTTTTATC-GAAGCAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
827 TTTTTTAAAATTTTT-TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
* * *
16580179 TTGTTGGCAAGCACAAAAAACTTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
1 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
16580244 AAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
66 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
16580309 TCTTTAAGGAGGTGT-AGGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT-TAAGGGCCAAGT
131 TCTTTAAGGGGGTGTGA-GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * *
16580372 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCAATCGCCCGAACCCTAATG
195 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCAATCACCGGAACCCCAACG
* *
16580437 CCGTCGGTCAAGTTCTCCGGCGATG
260 CCGCCGGTCAAGTTCTCCGACGATG
16580462 GTGCCGCAAC
Statistics
Matches: 1835, Mismatches: 186, Indels: 114
0.86 0.09 0.05
Matches are distributed among these distances:
874 1 0.00
875 128 0.07
876 4 0.00
878 3 0.00
879 98 0.05
880 118 0.06
881 149 0.08
882 13 0.01
883 162 0.09
884 1 0.00
885 4 0.00
887 1 0.00
888 3 0.00
892 1 0.00
893 2 0.00
896 2 0.00
899 154 0.08
900 147 0.08
901 257 0.14
902 4 0.00
903 3 0.00
904 92 0.05
905 1 0.00
906 5 0.00
907 209 0.11
908 63 0.03
909 68 0.04
910 5 0.00
911 133 0.07
912 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (889 bp):
TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCAATCACCGGAACCCCAACGC
CGCCGGTCAAGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAG
CACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGTCTGATCTTAGACTGGGAATGA
ACTCCGTATGCTTAGACTAATGAACTTTATATGCCTAAGTCAACCCACGAAATTACGTGGGGCGC
TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGACGGGTCCCCTCTACGTGCTGCTGA
TCCTGCTACCACAACCCTTGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCAGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGAGTGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCACGATTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
Found at i:16582284 original size:26 final size:26
Alignment explanation
Indices: 16582232--16582284 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16582222 CTGGTCCGAT
* *
16582232 CTTAGACTGGGAATGAACTCTGCATG
1 CTTAGACTGGCAATGAACTCCGCATG
* *
16582258 CTTAGATTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGCATG
16582284 C
1 C
16582285 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGCATG
Found at i:16583620 original size:874 final size:872
Alignment explanation
Indices: 16581370--16584498 Score: 3715
Period size: 874 Copynumber: 3.5 Consensus size: 872
16581360 GACAGAGAAG
* * ** *
16581370 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCTGCCGG-TCGGAGTGGT
1 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCT-AGAG-GG-
* * * ** ** * * *
16581434 AGGATGCGCAAGCTGGGGATTGGTCGGGTTTCCCTCTACGTGCGGTTGATCCTGCTG-TCGCAAC
63 GGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCT-GCAAC
* * *
16581498 CCTCAGTCCTGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA
127 CCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* ** * * * * **
16581563 GCGGGCGGACGGGTGGGCGGGCACTACGTCGGCCAGCGAG-CTAGGATGTACAAGCCGTGGATCG
191 GTGGGCGGGTGGG-CGGCGGGCACTACGCCGGCCAGAGAGAC-GGGATGCGCAAGCCGTGGATCG
* * * *
16581627 ATAGGGTGGAATGTGGGTTTAGGCTCATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCT
254 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCT
16581692 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
319 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * * *
16581757 TATTTTTCACGATTTTCGAATCCTTTTGCGGTTCGAGATTTTTAAAAATTTTTTCGGAATGAGTT
384 TATTTTTCACGATTTTTGAAACTTTTTGCTGTTCG-GATTTTTTAAAATTTTTTCGGAAGGAGTT
* * * ** * * *
16581822 TTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTA
448 TTGGCACCAAACCTGGTAGACACGATCCTTGCATTTTTGTCGGCATGCACAAAAAAATTCAGCTA
*
16581887 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAGAAGTGTCCCCATTGCAGACACTTTAA
513 AAAACCCGAAGTGTACAAGA-----TGA--ATTT------A-TG----C--T--AGACACTTTAA
16581952 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
556 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
**
16582017 TGATGAGGGATAGGGAGCCAATATAAAAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
621 TGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * * *
16582082 ACCCCCCGTCCCCCCGATCGTCGAAACCCTAATGCCGCCGGTCAGGTTCTCCAGTGATGCTCCGA
686 ACCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCG-
* * * *
16582147 CGATAGTGCCCCGACGAAGAAAAATGCGTCACCAGCACATGCCCAAGCCCAGCATGTGCAGCCGC
750 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC-C
* * * * *
16582212 AACCTTTGGTCTGGTCC-GATCTTAGACTGGGAATGAACTCTGCATGCTTAGATTGGCAAT
814 AACC-CTCGTCTGG-CCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAAT
* * * *
16582272 GAACTCCGTATGCCTAAGTCAACCCACGAAACCAGCGTGCGGGTGCTCAA-AGGGTGAGAGGGGT
1 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCT-AGA-GGG-
* * * * * *
16582336 GGGATGCACAAGTCGGGGATCGACTGGCT-CCCCTCTGCATGCTGTCGATCCTACTGCTGCAACC
63 GGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCTGCAACC
** * *
16582400 CTCGCTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAATGACAAAATGAG
128 CTCG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
*
16582465 TGGGTGGGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
192 TGGGCGGGT----GGGC-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
16582530 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGG
252 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGG
* * * *
16582595 CTTGCAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAACTTTTATGGCAAGACTACTCGTTT
317 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
16582660 TCTATTTTTCACGATTTTTGAAAC--TTTGCTCGGTTCTGGATTTTTTAAAATTTTTTCGGAAGG
382 TCTATTTTTCACGATTTTTGAAACTTTTTGCT--GTTC-GGATTTTTTAAAATTTTTTCGGAAGG
* * *
16582723 AGTTTTGGCACCAAACCTGGTAGACATGATCGTTGCATTTTTGTCGGCATGCATAAAAAAATTCA
444 AGTTTTGGCACCAAACCTGGTAGACACGATCCTTGCATTTTTGTCGGCATGCACAAAAAAATTCA
16582788 GCTAAAAACCCGAAGTGTAC-A-A-G-ATTT-TG-T-GACACTTTAATGGCTACTGGCAGCAAAC
509 GCTAAAAACCCGAAGTGTACAAGATGAATTTATGCTAGACACTTTAATGGCTACTGGCAGCAAAC
* * * * * *
16582846 CTGTAAAATCTCAAATGCGCTTTAAAGGGGTTTGAGTTCTCGAGGTTTGATGAAGGATAGCGAGC
574 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGC
16582911 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTCGGCCCCCCCGA
639 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CGGCCCCCCCGA
* *
16582976 TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTTC-GACGATGCTCCTGTGATGGTGCCCCGACG
703 TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAG-CGATGCTCC-GCGATGGTGCCCCGACG
16583040 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGATCTGGCC
766 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC-CAACCCTCG-TCTGGCC
16583105 TGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAAT
829 TGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAAT
* * * * * * *
16583149 GAACTCCATTTGCCTAAGTCGAA-CGAC-AAATGAGCATGCGGGCGTTGAACCGGCTAGAGGGGC
1 GAACTCCGTATGCCTAAGTC-AACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCTAGAGGGG-
* * * * *
16583212 AGGATACGCAGGCCAGGGATCGGCCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCTGCAACC
64 -GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCTGCAACC
** *
16583277 CTCAGTCCAATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATCGAAACGA
128 CTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-CGAAACGA
* * * ** *
16583342 GCGGGCAGGTGGGCTGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCTTGGCGTGGATCGA
191 GTGGGCGGGTGGGC-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
16583407 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGA-GTGCCAATGCCATTTTTATGGCT
255 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-ACGTGCCAATGCCATTTTTATGGCT
* *
16583471 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTT
319 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
16583536 TATTTTTCACGATTTTTGAAACTTTTTGCTGTTCGAGATTTTTTAAAACTTTTTCGAAAGGAGTT
384 TATTTTTCACGATTTTTGAAACTTTTTGCTGTTCG-GATTTTTTAAAATTTTTTCGGAAGGAGTT
* * * * * *
16583601 TTGGC-CCTAAACTTGGTAGACACGGTCCTTGTATTTTTTTTGGTATGCACAAAAAAATTCAGCT
448 TTGGCACC-AAACCTGGTAGACACGATCCTTGCATTTTTGTCGGCATGCACAAAAAAATTCAGCT
*
16583665 AAAAACTCGAAGTGTACAAGATTTTGGGAACCATTTGAAAAAGTGTCCCCATTTCAGACACTTTA
512 AAAAACCCGAAGTGTACAAGA---T--G-A--ATTT-----A-TG----C---T-AGACACTTTA
*
16583730 ATGGCTACTGGCAGCAAACTTGTAAAAT-TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGT
555 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGT
* * *
16583794 TTGAATGAGGGATAGGGGGCCAATATAAGGGCC-AGTAGCAGCA-CCATCGCACATCCTGTGCGC
620 TTG-ATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
*
16583857 ACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCTGTCGGTCAGGTTCTCCAGCGATGCT
684 ACA--CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCT
* ** *
16583922 CCAACGATGGTGCCCC-ACGAAG-AAAATTTGGCACCAACACATGCCCGAGCCCCAG-ATGTGCT
747 CC-GCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG-CCCAGCATGTGCT
* * * * *
16583984 -CCGAA-CCTCTGTCTAGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACT-GGAAT
810 GCCCAACCCTC-GTCTGGCCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAAT
* *
16584045 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCACTCAACCGGCTAGAGAGGGG
1 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCTAGAG-GGGG
* * * * * ** *
16584110 GATGTGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAACCTGCTACCACAACCTT
65 GATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCTGCAACCCT
* * * * *
16584175 CTGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATACCTAAGCCAACCGACGAAACTAGTG
130 C-GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTG
* * * ** * *
16584240 GACGGGCGGACGGCGGGCACTTTGCCGGCCAGAGAGACGAGATGCGCAAGCCTTGGATCGATAGG
194 GGCGGGTGGGCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
* * * *
16584305 TTGGTAGGTGGGTTTAGGCGCATCTTCATATTTCTACATTCCAATGCCATTTTTATGGCTTGTAA
259 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAA
*
16584370 ATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
324 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * *
16584435 TTCAGGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
389 TTCACGATTTTTGAAACTTTTTGCTGTTC-GGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
16584499 GCCCAACACA
Statistics
Matches: 1935, Mismatches: 222, Indels: 148
0.84 0.10 0.06
Matches are distributed among these distances:
873 3 0.00
874 293 0.15
875 5 0.00
876 188 0.10
877 262 0.14
878 17 0.01
879 1 0.00
882 1 0.00
886 6 0.00
893 3 0.00
894 228 0.12
895 19 0.01
896 125 0.06
897 72 0.04
898 6 0.00
899 2 0.00
900 32 0.02
901 124 0.06
902 182 0.09
903 74 0.04
904 1 0.00
905 289 0.15
906 2 0.00
ACGTcount: A:0.24, C:0.24, G:0.26, T:0.26
Consensus pattern (872 bp):
GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCTAGAGGGGGG
ATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCTGCAACCCTC
GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGG
CGGGTGGGCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAAT
TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
CACGATTTTTGAAACTTTTTGCTGTTCGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCACC
AAACCTGGTAGACACGATCCTTGCATTTTTGTCGGCATGCACAAAAAAATTCAGCTAAAAACCCG
AAGTGTACAAGATGAATTTATGCTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
AAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGC
CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCGGCCCCCCCGATCGTCGGAACCCC
AATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGCGATGGTGCCCCGACGAAGAAAAATGCGGCA
CCAGCACATGCCCGAGCCCAGCATGTGCTGCCCAACCCTCGTCTGGCCTGATCTTAGACTGGGAA
TGAACTCCGTATGCTTAGATTGGGAAT
Found at i:16584049 original size:25 final size:26
Alignment explanation
Indices: 16584006--16584057 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
16583996 CTAGTCTGAT
16584006 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16584032 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16584057 C
1 C
16584058 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 17 0.68
26 8 0.32
ACGTcount: A:0.29, C:0.21, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16584591 original size:26 final size:24
Alignment explanation
Indices: 16584549--16584599 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 24
16584539 CTCGGGTCCT
*
16584549 ATTCTGATCTTAGACTGGGAATGA
1 ATTCTGATCTTAAACTGGGAATGA
16584573 ATTCTGTATGCTTAAACTGGGAATGA
1 ATTCTG-AT-CTTAAACTGGGAATGA
16584599 A
1 A
16584600 CTCCGTATCA
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
24 6 0.25
25 2 0.08
26 16 0.67
ACGTcount: A:0.31, C:0.12, G:0.24, T:0.33
Consensus pattern (24 bp):
ATTCTGATCTTAAACTGGGAATGA
Found at i:16584607 original size:26 final size:26
Alignment explanation
Indices: 16584557--16584607 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16584547 CTATTCTGAT
* * *
16584557 CTTAGACTGGGAATGAATTCTGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
16584583 CTTAAACTGGGAATGAACTCCGTAT
1 CTTAAACTGGGAATGAACTCCGTAT
16584608 CACTAAGTCA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.16, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:16585494 original size:26 final size:26
Alignment explanation
Indices: 16585458--16585513 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
16585448 TTGATCTGAT
16585458 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16585484 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16585510 CTTA
1 CTTA
16585514 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16586324 original size:905 final size:903
Alignment explanation
Indices: 16584501--16588155 Score: 4636
Period size: 905 Copynumber: 4.1 Consensus size: 903
16584491 AGTTTTGGGC
* *
16584501 CCAACACATGC-CTGAGCCCAGCATGTGTTGCCGCAACCCTCGGGTCCTATTCTGATCTTAGACT
1 CCAACACATGCTC-GAGCCCAGCATGTGCTGCCGCAACCCTC-GGTCCGA-TCTGATCTTAGACT
* * *
16584565 GGGAATGAATTCTGTATGCTTAAACTGGGAATGAACTCCGTAT-CACTAAGTCAACCCACGAAAC
63 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC-CTAAGTCAACCCACGAAAC
*
16584629 GAGCGTGCGGGTGCTCAGCCGGCCAGAGGGG-CAGGATGCGCAAGCCGGGGATCGGCCGGGTCCC
127 GAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGA-GATGCGCAAGCCGGGGATCGGCCGGGTCCC
* * * * * * **
16584693 CCTCTGTGTGCTGCCAATCCTGCTGCCACAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGA
191 CCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
* * * * * * *
16584758 ACTCTGTATCCCTAAGCGAACCGATGAAACGAGC-GG-A-CGGGCGGACAGGCACTACGCCGGCC
256 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGCGGGCGGGCAGACACTACGCCAGCC
*
16584820 AGAGAGACGGGATGCGCAAGCCGTGGATCCATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
321 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* * *
16584885 TTTCTGCATGCCAATGCCATTTTTATGGCCTGTAAATGCATACAATGGT-CCTTAAGCCTGCACG
386 TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
**
16584949 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTTAAACTTTTTACGGTTCG
451 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCG
* * * *
16585014 AGATTTTTTAAAATTTTTTTGGAAGGATTTTTTGCCCCAAACATGGTAGACATGATCCTTGTATT
516 AGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--
* * ** * * *
16585079 TTTTTTTTGGTATGCACAAAAAAATTCAGCCCAAAATTCAAAGTGTACAAGATTTTGTGACCGTT
579 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
16585144 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
644 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* * *
16585209 TGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAA
709 TGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* *
16585274 GTACCAGCACCCATCGCACATCATGTGCGTACACCCCCCCGGCCACCCCGATCGTCGAAACCCCA
774 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCA
* ** * * ***
16585339 ATGCCGCCGATCAGGTTCTCTGACGATGCTCTGGCGATGGTGCCCCGTCGAGGAAAAATGTGGCA
839 ATGCCGCCGATCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATACAGCA
* * * **
16585404 CCAACACATGCTCGAGCCTAGCATGTTCTGTCGCAACCCTCGGTTTGATCTGATCTTAGACTGGG
1 CCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGG
* *
16585469 AATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGC
66 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * *
16585534 GTGCGGGTGCTCAGTCGAG-CAGAGGGGTGAGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTC
131 GTGCGGGTGCTCAGCCG-GCCAGAGGGGTGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTC
* * ** *
16585598 TACGTGCTACCGATCCTGCTACCGCAACCCTCAGTCCAATCTGATCTTAGACTAGGAATGAACTC
195 TGCGTGCTACCGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * *
16585663 CGTATGCCTAAGTCAACCGACGAAACGAGCGGGCAGGCGGACGGGCAGACACTACGCCCGCCAGA
260 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCA-GCGGGCGGGCAGACACTACGCCAGCCAGA
* * *
16585728 GAGACGGGATGTGCAAGCCATGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
16585793 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * *
16585858 TGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTCAAAAC-TTTTAGCGGTTCGGG
454 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTA-CGGTTCGAG
* * * * *
16585922 ATTTTTTATAATTTTTTTGGAATGATTTTTGGGCCTAAACTTGGTAGACGTGATCCTTGTATTTT
518 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
16585987 TGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
583 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
16586052 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCT
648 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
16586117 CTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
713 CTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * *
16586182 CAGCACCCATCGCACATAATGTGCGCACACCCCCCCCGGCCCCCCCGATCGTCGGAACCCCATTG
778 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATG
* * * *
16586247 TCACCGGTCAGGTTCTCCGACGATGCTCCAGCGATTGTGCCCCGACGAAGAAAAATACAGCA
842 CCGCCGATCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATACAGCA
* * * * *
16586309 CCAACACATGCTCGAGCCAAGCATGTGCTGTCACAACCCTTGGTCCGATCTGATCCTAGACTGGG
1 CCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGG
* * * *
16586374 AATGAACTCTGTACGCATAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGC
66 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * ** *
16586439 GTGCGGGTGCTCAGCCAGCCAGAGGGGTGGGGTGCGCAAGCCGAGGATTGATCGGGTCCCTCTCT
131 GTGCGGGTGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCT
* * * * * *
16586504 GCATGCTGCTGATCCTACTACCGCAACCCTCGGTCTGGT-TCGATCTTAGACTGGAAATGAACTC
196 GCGTGCTACCGATCCTGCTACCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTC
* * * * * * * *
16586568 CGTATGCCTACGCCAACCGACAAAACAAGCGGACGGGAGGGCGGGTGGGCGGGCACTACGCCTGC
260 CGTATGCCTAAGCCAACCGACGAAACGAGC-G--GGCA--GCGGGCGGGCAGACACTACGCCAGC
* * * *
16586633 CAAAGAGACGGGATGCGCACGCCGTGGATCGATAGGGTCGTAGGTGGGTTTAGGCACATCTTTAT
320 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
16586698 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTTCA
385 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC-TTCA
*
16586763 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTT
449 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTT
* * ** * * ** *
16586828 CGAGATTTTGTAAAA-ATTTTCAGAAGGGGTTTTGACCCCAAACTTTTTAGACGTCATCCTTGTA
514 CGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
16586892 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
579 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
*
16586957 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAA
644 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* ** * *
16587022 TGCTCTATAAGGGCATGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAACATAAGGGCCAA
709 TGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* *
16587087 GTACC-G--------GCAC-CCA--T-CGCACA-CCCCCCGGCCCCCTCGATCGTCGAAACCCCA
774 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCA
* * * ** * *
16587138 TTGCCGCCGGTCAGGTTCTTCGGTGATGCTCCGGCGATGGTGCCCCAACGAAGAAAAATACAGCA
839 ATGCCGCCGATCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATACAGCA
** * *
16587203 CCAGTACATGCTCAAGCCCAGCATGTGCTGCTGCAACCCTCGGT-C---C-GATC-----C----
1 CCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGG
* *
16587254 -----A------AT-CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGC
66 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
** * * * * * *
16587307 GTGCGGACGCTCAGCCGGCTAGAGGGGCGGGCTGCGCAAGCCGGAGATCGGCCGGGTCCCCCTTT
131 GTGCGGGTGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCT
* * ** ** *
16587372 GTGTGCTACCGATCTTGCTGTCGCAACCCTTTGTCCGGTCCTGTATCTTAGACTGGGGGATG-AC
196 GCGTGCTACCGATCCTGCTACCGCAACCCTCGGTCCGGT-CTG-ATCTTAGACT-GGGAATGAAC
* * * * *
16587436 TACGTATGCCT-AGCCCAACCGACGAAACGAGC-GG--GCGGGTGGGC--ACTAAT-GGTCGAGC
258 TCCGTATGCCTAAG-CCAACCGACGAAACGAGCGGGCAGCGGGCGGGCAGAC-ACTACG-CCAGC
16587494 CAGAGAGCACGGGATGCGCAAGCCGTGGATCGATAGGGGTGGTAGGTGGGTTTAGGCACATCTTC
320 CAGAGAG-ACGGGATGCGCAAGCCGTGGATCGATA-GGGTGGTAGGTGGGTTTAGGCACATCTTC
* * * * *
16587559 ATA-TTCTGCGTGCGAATGCCATTTTTGTGGCTTGT-AATTCATCCAATGCTCCCTTAAGCCTTC
383 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* ** * * * * *
16587622 ATGTGAAGTTTCATGGC-ATTCGACTCATTTTCTATTTTTCCATGACTTTT-GAAAC-CTTTGC-
448 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT-CACGA-TTTTCAAAACTTTTTACG
*
16587683 GTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTT
511 GTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
16587748 GTATTTTTGTTGGCATGCACAAAAAAA-TCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACC
576 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* * * *
16587812 ATTTGACAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCCC
641 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
*
16587877 AAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
706 AAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * *
16587942 CAAGTGCTAGCACCCATCGCACATCATGTGCGCACATCCCCACCGGCCCCCCCGATCGTCGGAAC
771 CAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGAAAC
* * ***** * *
16588007 CCTAAAGTTTTTGATCAGGTTCTCCGACGATGCTCCAACGATGGTGCCCCGACAAAGAAAAATAC
835 CCCAATGCCGCCGATCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATAC
*
16588072 GGCA
900 AGCA
* * * * * *
16588076 CCAGCACATGCCCGAG-CCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTACACTGGG
1 CCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGG
16588140 AATGAACTCCGTATGC
66 AATGAACTCCGTATGC
16588156 CTAAGTTAAC
Statistics
Matches: 2390, Mismatches: 290, Indels: 149
0.84 0.10 0.05
Matches are distributed among these distances:
858 178 0.07
859 88 0.04
860 30 0.01
861 38 0.02
862 65 0.03
863 30 0.01
866 2 0.00
867 4 0.00
868 128 0.05
869 3 0.00
870 40 0.02
871 11 0.00
872 25 0.01
873 90 0.04
875 1 0.00
876 1 0.00
877 4 0.00
882 1 0.00
884 1 0.00
889 4 0.00
890 1 0.00
891 1 0.00
893 1 0.00
894 122 0.05
896 6 0.00
897 3 0.00
898 1 0.00
899 1 0.00
900 4 0.00
901 207 0.09
902 9 0.00
903 36 0.02
904 217 0.09
905 463 0.19
906 125 0.05
908 4 0.00
909 368 0.15
910 72 0.03
911 5 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.26
Consensus pattern (903 bp):
CCAACACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGG
AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
GTGCGGGTGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCT
GCGTGCTACCGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
GTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGCGGGCGGGCAGACACTACGCCAGCCAGAGA
GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATT
TTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
TAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
CACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGC
CGATCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATACAGCA
Found at i:16590272 original size:26 final size:26
Alignment explanation
Indices: 16590236--16590288 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16590226 GTTGACTTAG
*
16590236 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
16590262 GCATACGGAGTTTATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16590288 G
1 G
16590289 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:16591178 original size:26 final size:26
Alignment explanation
Indices: 16591142--16591193 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16591132 TTGACTTAGA
16591142 CATACAGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
*
16591168 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
16591194 ATCAGACCTG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAGTCTAAG
Found at i:16592059 original size:26 final size:26
Alignment explanation
Indices: 16592030--16592082 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16592020 GTTGACTTAG
* *
16592030 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
16592056 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16592082 G
1 G
16592083 ATCGGATCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16593071 original size:26 final size:26
Alignment explanation
Indices: 16593042--16593095 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
16593032 TGGGTTGACT
* *
16593042 TAGGCATACGGAGTTCATTCCCCGTC
1 TAGGCATACAGAGTTCATTCCCAGTC
16593068 TAGGCATACAGAGTTCATTCCCAGTC
1 TAGGCATACAGAGTTCATTCCCAGTC
16593094 TA
1 TA
16593096 AGATCGGGCC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.24, C:0.28, G:0.20, T:0.28
Consensus pattern (26 bp):
TAGGCATACAGAGTTCATTCCCAGTC
Found at i:16594117 original size:895 final size:893
Alignment explanation
Indices: 16588380--16625630 Score: 21096
Period size: 903 Copynumber: 41.2 Consensus size: 893
16588370 TGCTCGCCCG
* ** * * * *
16588380 CCCGCTCCTCTGGTAGGCTGAGCGCTCGCACGCTCGTTTCGCGGGTTCACTTAGGCATACGAAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16588445 TCATTCCCAGTCTAAGCATGCAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * *
16588510 GTAGCACATGCTGGGCTCGAGCATGTGCTGGTGACGCATTTTTCTTC-ACTGGGGCACCAT-GCC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTC-GGGGCACCATCGCC
* ** * *
16588573 GGAGCATCGCTGGAGAACCTGACCGATGGCATTGGGGTTCCAGTGATC-GGGGGGCCGAGGGGGT
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGT
*
16588637 GT--GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16588700 AACCTCGACAACTCACACCCCCTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
16588765 TTAAAGTGTCTGAAATGAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
16588830 TATCTGAATGTTTTTGTGCATGCCAACAAAAATACAATGATCATGTC-ATCCAAGTTTGGGGCCA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA-CCAAGTTTGGGGCCA
* * * *
16588894 AAACTCCTTCTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGT-AAAAAA
518 AAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAAT
* * * * *
16588958 AAAAAATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCACTATATGAATTTAC
582 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* * * *
16589023 AAGCCATAAAAATGGCATTGGCATGGAGAAATATGAATATGTACCTAAATCCACCTACCACCCTA
647 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
*
16589088 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCGCCCGCCCGTCCGCCCGC
712 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G-T-GCCCG-CC-T--GCCCGC
* * * *
16589153 TCGTTTCGTCGGTTGGGTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCAAGG
769 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG
* * * * *
16589218 ATTAG-GGCAGCAGGATCGGCAGCACGCAGAAGGGGATCCGATCGATCCCCGACTTGCGCAT
834 GTT-GCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * * *
16589279 CCCGCCCCTCTGGCTGGCTGAGCACCTGCACGCTCGTTTCGTGGGTTGACTTATGCTTACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * * *
16589344 TCATTTCCAATCTAAGCATACGGAGTTCATTCTCAGTCTAAGATCAGACCGGACAGAGGGTTGCA
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * ** *
16589409 ACA-CACATGCTGGGCTCAGGCATGTGCTGGTGCCGAATTTTTCTTCGTCAAGGCACCATCGTCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * *
16589473 GAGCATCGCCGGAGAACCTGACCGACGGTATTGGGGTTCTGGCGATTGGGGGGGCCGGAGGGGTG
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGG-GGGGTG
*
16589538 TGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
16589603 TCCTCGAGAACACACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
16589668 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTC-ATGTTTT
390 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA-GTTTT
* * * *
16589732 TAGGTGAATGTTTTTATGCATGCCAACAAAAATACAAGGATCAAGTCTACCAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
16589797 AACTCTTTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* *
16589862 GAAAACGAGTCGTCTGGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTTTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* *
16589927 AGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * *
16589992 TGATCCACAGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCTACCCGCCCGCCCGCCCGCT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G--T----GCCCGCCTGCCCGCT
* * * * *
16590057 CGTTTCGTCGGTTGGCTTAGGCATA-GAAAGTTCATTCCTAGTCTAAGATTGGACTGGACAGAGG
770 CGTTTCGTCGGTTGGCTTAGGCATACG-GAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG
* * ** *
16590121 GTTACGGTAGCAGGATCGGTAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCACAT
834 GTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
** * *
16590182 CCCTTCCCACTGGCCAGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * ** *
16590247 TCATTCCCAGTCTAAGCATACGGAGTTTATTCCCAATCTAAGATCAGACCAGAATGAGGGTTACG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
** * * ** *
16590312 GTTGCACATGCTGGGCTTGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * *
16590377 GAGCATTGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGTGATTGGGGGGGCCGGGGGGTGT
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGT
*
16590442 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAA
261 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
16590507 CCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATT
326 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * *
16590572 AAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTAA
391 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
16590637 GCTGAATTTTTTTGTTCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
456 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * * * * * *
16590702 ATCCTCCCAAAAAAAAATTTTAAAAAATCCCTAACCGCAAAATGTTTCTAAAATCATGAAAAATA
521 CTCCTTCC--GAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* *
16590767 GAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGAGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
16590832 AGCCATAAAAATGGCATTGGCGAAT--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
648 AGCCATAAAAATGGCATTGGC--ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
*
16590895 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGTCCGCACG
711 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTG--C--CCG--C-
* * *
16590960 TTCATTTCGTCGGTTGGTTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAA
769 -TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAG
* * * * **
16591025 GGTTGTGGCAGCAGGATCGGCAGCATGCAGAGGGGGACCCGATCGATCCCCGGCATATGCAT
833 GGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * * ** * *
16591087 CCCGCCCTTCTGACCGGCTGAACGCCCACACGCTCGTTTTATGGGTTGACTTAGACATACAGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16591152 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCTGACCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16591217 ACAGCATATGTTGGGCTCGGGCATGTGCTGGT-TC-CATATTT-TTC-T----------TCGTCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * * * * * * *
16591268 GAGCATCGTCGGTGAACTTGACCGACGGCACTGGGGTTTCGACAACCGGGGGGGCCGGGGAGGTG
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGG-GGTG
* *
16591333 TGCACAAATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * *
16591398 ACCTCGAGAACTCACACCCCCTTAAATAGCATTTGAGATTTTACAGGTTTGCTACCTGTAGCCAT
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* * *
16591463 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGCCACGAAATCTTGTACACATCGAGTTTTT
390 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * *
16591528 AGCTGAATTTTTTTGTGCATGCGAATAAAAATACAAGGATCATGCCTACCAAGTTTGGGGCCAAA
455 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * ** *
16591593 AATCCTTCTGAAAAAATTTTAAAAAATCTTGAATCTCAAAAAGTTTTGAAAATCGTGAAAAATAG
520 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCT-AAAAAGTTTCAAAAATCATGAAAAATAG
* * *
16591658 AAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTGAGGGACCATTGTATGAATTTACAA
584 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * * ** *
16591723 GCCA-CAAAATGGCATTGGCACGTAGAAATATGAAGATGTGTGTAAACCCACCTACCACCTTATC
649 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * *
16591787 GATCCACGGCTTGCGCATCCCATCTCTCTGGCAGACGCAGTGCCCACTCGCCCGCCTGCCCGTTC
714 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG--GC-GT----AGT-GCCCGCCTGCCCGCTC
* ** **
16591852 ATTTTATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCGGACCGAGGGT
771 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGT
* * * * *
16591917 TGCGGTAGCAGGATCGATAGCATGCAGAGGGGAACCCGACCGATCCTCGGCTTGCGCAT
836 TGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* ** * * * *
16591976 CCCACCCCTCTGGCCTACTGAGTGACCGCATGCTCATTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * * * *
16592041 TTATTCCCAGTCTAAGCATACAGAGTTCATTCCTAGTCTAAGATCGGATCAGACCAAGGGTTAC-
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * *** * * * ** * * *** *
16592105 GCA-TAC--GGTTGGCTTACGCA--TAC-GGAGT-TCA-TTCCCAGTC-TAAGATTCGACCA--A
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTC-TTCGT-CGGGGC-ACCATCG
* * ** * * * * * * ** * ***
16592159 ACTGAGGGTTGCAGTAGCAA---GATCGGCAGCACGTAGAGGGGCACCCAGTCGATC--CCCGGC
193 CCGGAGCATCGCCGGAG-AACCTGACCGGCGGCA--T--TGGGG-TTCC-GGCGATCGGGGGGGC
** * ** * * * * *** * ** * *
16592219 TTGTGCATCT-CGCCCCTCG--G-GC-ACTTGCTGGTGC-CGTA-TT-TTTCTTCGT-CGGGGCA
251 CGGGGGGTGTGCGCACAT-GATGTGCGA--TG--GGTGCTGGTACTTGGCCCTT-ATATTGGCCC
** * * * * * * ** *** ** ** **
16592275 CC-ATCACCGGAGC-ATCGGTGGAGTACCTGAC-CGGCAGCATTG-GGGTTTCGACGATCGGGGG
310 CCTATC-CCTCATCAAAC-CTCGAG-AACTCACACCCCCTTAAAGAGCATTT-GA-GAT----TT
** * ** * * * ** * * * *
16592336 GGCTGGGGGGTGCGCGCCCATGATGTGCGA-T-GGGTG-CTGGTACT-TGG-CCCTTATATTGGC
366 TAC--AGGTTTGC-TG-CCA-G-T-AGCCATTAAAGTGTCT-GAAATGGGGACACTT-T-TT---
* ** ** * ** * ** *** *** *
16592396 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGT
418 -TCAAAT-GGTCA-CAAA-ATCTTGTA--CACTTCGAGTT-TTTAGC---TGA-ATTTT----TT
** ** * * * ** *
16592461 T-TGC-TGCCAGTAGCCATTA-AA-G-T---GTCTA--AA--ATGGGG---ACACTTTTTTC---
468 TGTGCATGCCAACA-AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * * * *** ***
16592508 -AAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAATTTTTTTGTGCATGTGAACAA
532 AAAAT-TTTAAAAAATCTCGAAC-CTAAAAAG--TTT--C--AA-----AAAT-CA--TG---AA
* * * * *** *** **
16592571 AAATACAAGGATCGCGTC-TACCAATTTGGGGCCA-GAACTCCTTC-CAAAAAAATTTTGAAAAT
578 AAATAGAA--AACGAGTCGT--C---TT---GCCATGAA--ACTTCAC-GTGAAGGCTT--AAGG
** * ** * ** * ** * *
16592633 CCCCAAATCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACT
628 GACC--ATTGTATGAA-TTT-ACAAGCCAT-AAAAAT-G-GCAT---T-GGCATG-CA-GAAA--
* * * *** ** * * * *
16592698 TCACGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCCATAAAAATGGAATTGGCACATAG
678 T-A--TGAA-G---ATGTG-CC--TAAACCCACCTACCA-CCCT----ATCG-A-T--C-CA-CG
** * * * * * ** * * * **
16592763 AAATATGAAG-ATGTACC-TAAACCCACCT-ACCACCCTATTGATCCACGACTTGCGCATCTCGT
722 -GCT-TG-CGCA--TCCCGT---CTC-TCTGGCCGGCGTAGTG--CC-CG-CCTGC-CCGCTCGT
16592825 TTCTCTGGCCGGCCTAGTGCCCGTCCGCCTGCTCGCCCGCTCGTTTCATCGGTTGGCTTAGGCAT
773 TTC---------------------------G-T----CG---G--T--T-----GGCTTAGGCAT
* * * * **
16592890 ACAGAGTTCACTCCCAGTCTAAGATCGGATCGGACTGAGGGTTATGGCAGCAGGATC-AGCAGCA
794 ACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCAGGATCGA-CAGCA
** * ** *
16592954 CATAGCGGGGGACCCGACCGATCCCCATCTTACGCAT
858 CGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* *
16592991 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTTGTTCCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * *
16593056 TCATTCCCCGTCTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGGCCGGACCGAGGGTTGTG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
** * * * **
16593121 ATAGCACATGTTGGGCTCGGGCATGTGCTGATG-CTGCATTTTTTTTCACCGGGGCACCATCGCC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGCC
* * *** *
16593185 GGAGCATTGCTGGAGAACCTGACCGGCGATGTTGGGGTTCCGGCGATCGGGGAGGCCGAGGGGGT
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGT
*
16593250 GTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
16593314 AACCTCGACAACTCACACCCCCTTAAAGAGCATTTGAGATGTTATAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
16593379 TTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTACGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
16593444 CAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACGAAGTTTGGTGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-A
* * *
16593509 AAAC-CCTTCCGAAAAAATTCTAAAAAATCCCAAACCTCAAAAAGTTTCAAAAATCATGAAAAAT
518 AAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCT-AAAAAGTTTCAAAAATCATGAAAAAT
* *
16593573 AGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTACGAATTTAC
582 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
** *
16593638 AAGTAATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
647 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * *
16593703 TCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCTGCCTGCTCCTTTCG
712 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCG
* * * * **
16593768 TGGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATTGGATCAAACCGAGGGTTGCGGC
777 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* * * *
16593833 AGCAGGATCGACAGCACGCAGAGAGGGATCCGGCGGATCCCCGGCTTGCGAAT
842 AGCAGGATCGACAGCACGCAGAGGGGGACCCGAC-GATCCCCGGCTTGCGCAT
* * ** *
16593886 CTCGCCCCTCTGGCCGGCTGAGCGCCCGCACACTCAATTCGTGGGTTGTCTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * ** * * * *
16593951 TCTTTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCCAAGATCGGATCAAACCAAAGGTTACA
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16594016 GCAGCACATGCTAGGCTCGGGCATGTGCTGGTGTCGTATTTTTCTTCATCGTGGCACCATCGTCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * ** *
16594081 GAGCATCACCAGAGAACCTGACCGATGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTG
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTG
* * * * * *
16594146 TACGCACATGATGTGTGTTGGGTGCTGCTACTTGGCCCTTATATTGGCCCTCTGTCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
16594211 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGATATTTTACAGGTTTGCTGCCACTAGCCAT
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
16594276 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTT
390 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * * * *
16594341 GGCTGAATTTTTTTATGCATACCAAAAAAAATACAAGGATCACGCCTACCAAGATTGGGGCCAAA
455 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * ** **
16594406 AGTCCTTCTGAAAAAATTTTTAAAAATCTCAAACCGTAAAAAGTTTTGAAAATTGTGAAAAATAG
520 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATAG
*
16594471 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAA
584 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
** *
16594536 GCCATAAAAATGGCATTGGCACCCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCCATC
649 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
** * * * * *
16594601 GATCCACGGCTTATGGATCCCGTCTCTCTAGCCAGCATAGTGCCCGCCCGCCCGTCCGCTCGTTT
714 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTG--C--CCGCTCGTTT
* ** * * *
16594666 CGTCGATTGGAATAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGGCTGGACC-ATGGGTTGC
775 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGA-GGGTTGC
16594730 GGCAGC---AT---------GCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCAT
839 GGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * *
16594774 CCCGCCTCTCTGGCTGGCTGAGCGCCTGCACGCTCCTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* ** ** * *
16594839 TCATTCCTAGTCTAAGCATATAGAGTTCATTCCCAGTCTAAGATCAAACCGGACAGAGGGTTCCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* ** *
16594904 GCAGCACATGTTGGGCTCGGGCATGTGCTGGTG-CTGCATTTTTCTTCACCGGGGCACCATCACC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * ** * * *
16594968 GAAGCATCACTGGAGAACCTGACCGACGGCATTACGGTTCCGGTGATC-AGGGGGCCGGGGTGTG
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
*
16595032 TGAGCACATGATGTGCGAT-GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
16595096 ACCTCGAGAACTCATACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTA-CCAA
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC-A
*
16595160 TTAAAGTGTCTGAAATGGGGACAC-TTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* *
16595224 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACGTCTACCATGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * * * * *
16595289 AACTGCTTTCAAAAAAATTTTAAAAAATCTCGAACGAC-AAAAATTTTTACAAATCGTCAAAAAT
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAC--CTAAAAAGTTTCAAAAATCATGAAAAAT
* * *
16595353 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA-GTATCATTGTATGAATTTCC
582 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* * *
16595417 AAGCCATAAAAATGGCATTCGCATGAAGAAACATGAAGATGTGCCTAAACCCACCTACCACCCTA
647 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
*
16595482 TCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGTCCGCCCGCCCCT
712 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CC-T--GCCCG-----
* * * ** *
16595547 CTCGTTTCATCGGTTGGCTAAGGCATATGGAGTTCATTCCCAGTCTAAGATCGGGTCGGACCAAG
768 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAG
* * * *
16595612 GGTTGCGGCAGCAGGATTGGCAGCACGCAGAGAGGGACCCGACCGATCCCCGGCTTGCGTAT
833 GGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * *
16595674 CCCGCCCCTCTGGCCGACTAAGCGCCCGTACGCTCGTTTCGTGGTTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16595739 TTATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * **
16595804 GCAGCACATGATGGGCTCTGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCATCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
** * * *
16595869 GAGCATCATCGGAGAACCTGACCGGCAGCATTGGGGTTCCGGTGATC-GGGGGGCCGGGGGGTGA
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGT
*
16595933 GCCCGCACATGATGTGCGATGGGTGCTGGTACTT-GCCCTTATATTGGCCCCCTATCCCTCATCG
261 G--CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16595997 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTAGACA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
16596062 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16596127 TAGCTGAATTTTTTTGTCCATGCCAACAAAAATACAAGGATCACGTCTACCATGCTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * * *
16596192 AACTCCTTTCGATAAAATTTTAAAAAATCTTGAACCGTAAAAAGTTTTACAAATCATCAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* *
16596257 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA-GTACCATTGTATGAATTTCCA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
*
16596321 AGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
*
16596386 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCTCGCCCGCCCGTCTGCCCGCT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G-T-GCCCG--C--CTGCCCGCT
* * * * *
16596451 CGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATTGGGCCGGACCAAGGG
770 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGG
** * * * * * * *** *
16596516 TTGTAGCAGCAAGATC-ACAGTATGTAAAGGGGGACCCCAGCGATGTTCGGCTTGCGTAT
835 TTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * *
16596575 CCCACCCCTCTGGCCAGCTGAGCGCCCGCACGCTCATTTCGTGGGTTTACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16596640 TTATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTCGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * **
16596705 GCAGCACATGATGGGCTCTGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCATCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * * *
16596770 GAGCATCGTCAGAGAACCTGACCGGCAGCATTGGGGTTCCGGTGATCGGGAGGGCCGGGGGGTGA
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGT--
* *
16596835 GCGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCG
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16596900 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTAGACA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
16596965 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16597030 TAGCTGAATTTTTTTGTCCATGCCAACAAAAATACAAGGATCACGTCAACCATGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * * *
16597095 AACTCCTTTCGATAAAATTTTAAAAAATC-CTGAACCGCAAAAAGTTTTAAAAATCCTCAAAAAT
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACC-TAAAAAGTTTCAAAAATCATGAAAAAT
* * *
16597159 AGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA-GTACCATTGTATGAATTTCC
582 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* *
16597223 AAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGGGCCTAAACCCACCTACCACCCTA
647 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* *
16597288 TCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCTCGCCCGTCCGCCTGCCCAC
712 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G-T-G--C--CCGCCTGCCCGC
* * * * * *
16597353 TCGTTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGGCCGGACCAAGG
769 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG
* * * * **
16597418 GTTGCAGCAGCAAGATCG-CAGTACGTAGAGGGGGACCCGAGCGATCTTCGGCTTGCGCAT
834 GTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * **
16597478 CCTGCCCCTCTGGCTGACTGAGCGCCCGCACGCTAATTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
16597543 TCATTCCCAGTCTAAG-AT-C-G-G---------A--C------C-GA----ACCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
** * *
16597582 GTGGCACATGCTGTGG-TCGGGCATGTGATGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGTC
131 GCAGCACATGCTG-GGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
** * *
16597646 GGAGCATCATCAGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGT
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGT
* *
16597711 GTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTACATTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
16597776 AACCTCGAGAATTCACACCCCCTTAAAGAGCATTTGAGATTTT-CAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
16597840 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16597905 TAGCTTAATTTTTTTGTTCATGCCAACAAAAATACAAGGATCACGTCTACCAAGATTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* *
16597970 AAATGCTTCCGAAAAAATTTTAAAAAATC-CTGAA-CTGCAAAAAGTTTCAAAAATCATGAAAAA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCT--AAAAAGTTTCAAAAATCATGAAAAA
* * **
16598033 TAGAAAATGAGTCGTCTTGCCATGAAACTTCAAGTGAAGGCTTAAGGGACCATTGTACAAATTTA
581 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * *
16598098 CAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCGCCCACCACCCT
646 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * * *
16598163 ATCGATCCACGGCTTGCGCATCCTGTCTCTTTGGCCGACGTAGTGCCCGCCCGCTCGCTCCTTTC
711 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTC
* * * * * *
16598228 GTCAGTTGGCTTAGGCATACGAAGTTCACTCCCAGTCTAAGATCGGATCAGACCGAGGGTTACGG
776 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * * * * * *
16598293 TAGCAGAATCGGCAGCATGTAGAGGGGGACCCAACCGATCCCCGGCTTGTGCAT
841 CAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * *
16598347 CCCACCCCTCTGGCCGGCTAAGCGCCCGCACACTCATTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * *
16598412 T--TTCTCCTAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAAGGTTG
66 TCATTC-CC-AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG
* ** *
16598475 CGGCAGCACATGCTAGGCTCAAGCATGTGCTGGTG-C-CA-TTTTCTTCATCGGGGCACCATCGC
129 CGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGC
* * * * **
16598537 CAGAGCATCGCCAGAGAACCTGACAGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCAAGGGGT
194 CGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGT
*
16598602 GTGCGCACATGATGTGCGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * * * * *
16598667 AACCTTGAGAACTTATACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTCGCTGCTAGGAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
16598732 TTAAAGTGTCTGAAATGAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* ** * *
16598797 TAGCTAAATTTTTTTGTGCACACCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGG-CAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * *
16598861 ACACTTCTTCTGAAAAAATTTTAAAAAATCAT-AAACCGCAAAAAGTTTCAAAAATCATGAAAAA
519 A-ACTCCTTCCGAAAAAATTTTAAAAAATC-TCGAACC-TAAAAAGTTTCAAAAATCATGAAAAA
**
16598925 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAAAGTATGAATTTA
581 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *** *
16598990 CAAGCCATAAAAGTGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACGACCCT
646 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * *
16599055 ATCGATCCACGGCTTGCACATCCCGTCTCTTTGGCCGGCGTAATGCCCCCCCGCCCGGCCGCACG
711 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGT-A-G------TGCCC-G-C-C-TG
* * * * *
16599120 CCCGCTCGTTTCATCGGTTGGCTTAGGTAGACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAC
764 CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC
* * ** * ** * *
16599185 TGAGGGTTACGATAGTAGGATCGACAGCACGCAGAGATGGACCGGGCCGATCCCCGGCTTGCGCA
829 CGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACC-CGACGATCCCCGGCTTGCGCA
16599250 T
893 T
* * * * *
16599251 CCCGCCCCTCTGGCCGACTAAGTGCCCACACGCTCGTTACGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16599316 TCATTCCCAGTCTAAG-AT-C-GA----A----C---C---GA----A-CTG---G-GGGTTACG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * ** * *
16599355 ACAGCACATGCTGGGCTCGGGCATGTGCTGGTGGCAAATTTTTCTTTGTCGGGGCACCATCGCCC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * *
16599420 GAGCATCGTCGGAGAACCTAACCAGCGGCACTAGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
196 GAGCATCGCCGGAGAACCTGACCGGCGGCA-TTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
* * *
16599485 TGCGCATATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * * * * *
16599550 ACCTTGATAACTCACACCCACTTAAAGAGCATTTGAGATGTTGCAGGTTTGCTGCCAATAGCCAT
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
16599615 TAAAGTGTCTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
390 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * * * * *
16599680 AGCTAAATTTTTTTGTGGATGCTAACAAAAATAAAAGGATCACAT-TACTAGGTTTGGGGCCAAA
455 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* ***
16599744 ACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGGAAATCATGAAAAATAG
520 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATAG
* *
16599809 AAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAA
584 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
**
16599874 GCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACAC-ACCACCCTAT
649 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCAC-CTACCACCCTAT
* * * *
16599938 CGATCCACGACTTGCGCATCCCATCTCTCTGGCCGACGTAGTGCCCACCAGCCCACCCGCCTGCT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-G----CCTGCC--C-
* * * *
16600003 TGCTCGTTTCATCGGTTGGCTTAGGCATATGGAGTTCATTCCCAATCTAAGATCAGACCGGACCG
767 -GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * * * * * **
16600068 AGGGTTGCAGCAGTAGGATCGGCAGCACGTAGAGGGGAACCCGGTCGATCCCCGGCTTGATCAT
831 AGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGCGCAT
* * * * * * *
16600132 CCTGCCCCCTCTGGCGGGCTGAACTCCCGTACGCTGGTTTCGTGGGTTGGCTTAGGCATACGGAG
1 CCCG-CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAG
* *
16600197 TTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTTTAAGATCGGACCGGATCGAGGGTTGC
65 TTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC
* * * * * **
16600262 GACAGCACATGCTGGGCTCGGGCATGTGCTAGTGCCGTATTTTTCTTCGTCGGGGCACTATCATC
130 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
* *
16600327 GGAGCATCACCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTG
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
* * *
16600391 TGCGTACATGATGTGCGATGGGTGCTGGTACATGGCCCTTATATTGGCCCTCTATCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * *
16600456 ACCTCGAGAACCCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCAT
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
16600521 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTT
390 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * * **
16600586 AG-TCGAATCTTTATGTGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGATCAA
455 AGCT-GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
** * * * * ** *
16600650 ATGTCTTTCCGAAAAAATTTTAAAAATTCCCAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
16600715 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * * *
16600780 AGCCATAAAAATGGCATTGGAACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCATCCTAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * *
16600845 CGATCCAC-GATTGCGCATCCCGTCTCTCTGGCTGACGTAGTGCCCGCCTACCCGCTCGCACGCC
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCT----G--C-C-CG--
* * * *
16600909 TACTCGTTTTGTCGGTTGGCTTAGGCATACGTAGTTCATTCCTAAG-CTAAGATCAGACCGGACC
768 --CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC-CAGTCTAAGATCGGACCGGACC
* ** * * * ** *
16600973 GAGGGTTACGATAGCAGGATC-AGCAGCACTCAAAAGGGGACCCGGTTGATCCCCAGCTTGCGCA
830 GAGGGTTGCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGCGCA
16601037 T
893 T
* * ** *
16601038 CCCGCCCCTCTGGCTGGCTCAGCGCCCGCACGCTCGTTTTTTGGGTTGACTTAGGCATGCGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16601103 TCATTCCCAG--T---C-TA---AG---ATT----G-----GATCGGACC-GAGC-A---TTGCA
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16601142 ACAACACATACTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTTTTCGTCGGGGCACCATCACCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * * * *
16601207 GAGCATCACTGGAGAACCTGACCGGCGACATTGGGCTTCCGACGATCGGGGGGGACGAGGGGGGT
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGG-C-CGGGGGGT
* * * * *
16601272 CTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATCTTGGCCACCTATCCTTCATTA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16601337 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATGTTACAGGTTTGCGGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16601402 TTAAAGTGTCTGAAATGGCGACACTTGTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * **
16601467 TAGCTTAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTATACCAAGTTTACGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
16601532 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAATATCGTGAAACATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* *
16601597 GAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTTTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
***
16601662 AGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * *
16601727 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGACCGCCCGCCCGCTCGTTTCTT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCGT
* *
16601792 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCAGCA
778 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * *
16601857 GCAGGATCGACAGCAC-AATGAGGGGGACCCAGTCAATCCCCGGCTTGCGCAT
843 GCAGGATCGACAGCACGCA-GAGGGGGACCC-GACGATCCCCGGCTTGCGCAT
* * * * *
16601909 CCCACCCCTCTGGCCTGCTGAGCGCCCGTACGCTTGTTTCGTGGGTTGGCTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* ** * * * *
16601974 TCATTCCTAGTCTAAGCATACGGAGTTCATGACCAGTTTAAGATCAGACTGGACCGAAGGTT-CT
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC-
* *
16602038 GGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGTC
130 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
* * *
16602103 GGAGCATCACCGGAGAACCTGACCGGCGGTATTGGGGTT-CGACGATCGGGGGGGCCGGGGGGGT
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGT
* * *
16602167 TTGCGCACATGATGTGAGATGGGTGCTGGTACTTGGTCCTTATATTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
16602232 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
16602297 TTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *** *
16602362 TAGCTGAATTTTTTTGCGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTCATGACCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
** * * *
16602427 AACTCCTTCTAAAAAAATTTTAAAAAATCTCGAGCAGTAAAAAGTTTCAAAAATCGTGAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAC-CTAAAAAGTTTCAAAAATCATGAAAAATA
* * * * * *
16602492 AAAAATGAGTCATCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTATATGAATTTGCA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * ** *
16602557 ACCCATAAAAATGGCGTTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * * **
16602622 CGATCCACGACTTGCGCATCCCATCTCTCTGGCCGACGTGGACCCCGCCTGCCCGCCCACTTCGT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCG----C-TCGT
* * * * * *
16602687 TTCGTCGGTTGGCTTAGGCATACAGAGTTCAATCCCATTCTAAGATTGGACCAGACCGAGGGTTA
773 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG
* * * * *
16602752 CAGCAGCAGGATC-AGCAGCATGCTGAGGGGGACCCGACTTATCCCCAGCTTGCGCAT
838 CGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGAC-GATCCCCGGCTTGCGCAT
* * * *
16602809 CCCACCCCTCTGGCCGACTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGAAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16602874 TCATTCCTAGTCTAACCATACGGAGTTCATTCCCAG-CTTAAGATCGGACCGGACCGAGGGTTGC
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTC-TAAGATCGGACCGGACCGAGGGTTGC
* * * * * **
16602938 GGTAGCACATCCTGGGCTCAGACATGTGCTGGTG-CTGTATTTTTCTTCGTCGACGCACCATCGC
130 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGC
* * * * *
16603002 CGGAGCATCCCCGGAGAACCTGATCGGCGGCATTGGGGTTCCTGTGATCGGGGGGGCCGGGGGCT
194 CGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGT
* * *
16603067 TTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATCTTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
16603132 AACCTCGAGAAGTCACA-CCCCTTAAAGAGCATTTGAGATTTTATAAGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16603196 TTAAAGTGTCTAAAATGGGGACACTTTTTCCAAATGGTCACAAAATGTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16603261 TAGCTGAATTATTTTGTGCATGCCAAAAAAAATACATGGATCACGTCTACCAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * *
16603326 AACTCCTTCCGAAAAAATTTAAAAAAATCTCGAACCGAAAAAATTTCAAAAATCGTGAAAAATAG
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCTAAAAAGTTTCAAAAATCATGAAAAATAG
* * *
16603391 AAAACGAGTCGTCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGATCATTGTATGAATTTGCAA
584 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * *
16603456 GCCATAAAACTGGCATTGGCATGCAGAAATATGAAGATGTG-CGAAACCCACCTACCACCCAATC
649 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * *
16603520 GATCCACGGCTTGCGCATCCCGTCTCTCTAGCCGGCGTCGTGCCCGCCCGCCCACCAACCCGCTC
714 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTG--------CCCGCTC
* * * * * * * *
16603585 ATTTCGTCAGTTAGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGATCGAGGGT
771 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGT
* ** * * *
16603650 TTCGATAGCAGGATCGGCAGCACGTAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCAT
836 TGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGCGCAT
* * * * * * * *
16603709 CCCGCCCTTCTGGACGGCTGAACACCCACACACTCGTTTCATGGGTTGACTTAGGCATATGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * *
16603774 TCATTCCTAGTCTAAGCATATGGAGTTCATTCCCAGACTAAGATCGGACCGGACCAAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16603839 ACAACACTTGCTGGGCTCGGGCATGTGCTGGTG-CTGCATTTTTCTTCGTCAGGGCACCTTCGCC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * *
16603903 GGAGCATCGCCGAAAAACCTGATCGGTGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGA
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--GGGGG-
16603968 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
257 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
* *
16604033 CAAACCTCGAGAACTCAAACCCCCTTAAAGAGCATTTGAGATTTTGCAGGTTTGCTGCCAGTAGC
322 CAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
*
16604098 CATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA-TT
387 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
*
16604162 TTTAGCTGAA-TTTTTTGTGCATGCCAA-AAAAATACAAGGATCACATCTACCCAA-TTTGGGGC
452 TTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA-CCAAGTTTGGGGC
* ** * *
16604224 GCAAAACTCCTTCAC-AAAATACTTTTAAAATCTCTCG-ACCAAAAAAGCTTCAAAAATCCATG-
516 -CAAAACTCCTTC-CGAAAA-AATTTTAAAAAATCTCGAACCTAAAAAGTTTCAAAAAT-CATGA
* *
16604286 AAAATAGAAAATGAGTCCGTGCCTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
577 AAAATAGAAAACGAGT-CGT-CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT-
* * * *
16604351 GAATTTACAAGCCATAAAAATGGCATTGGCAAGCAAAAATATGACGATGTGCCCTAACCCCACCT
639 GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTG-CCTAAACCCACCT
* * * *
16604416 ACCACCCTATCGATCCACCGGGCTTGCGTATCCTGTCTGTCTTGGCCGGCGAAGTGGCCCCGCCC
703 ACCACCCTATCGATCCA-C-GGCTTGCGCATCCCGTCTCTC-TGGCCGGCGTAGT-G-CCCG-CC
* * *
16604481 GTCCGCCCCTCGCTCGTGTTCATCGGTTGGCTTAGGGCAATACGGAGTTTATTCCCTGTCTACA-
762 -T--G--CC-CGCTCGT-TTCGTCGGTTGGCTTA-GGC-ATACGGAGTTCATTCCCAGTCTA-AG
* * ** * ** * *
16604545 ATTGGACCAGACTAAGGGTTGCGACAGCAGGATCGGTAGCACGTAGAGGGGGACCCGACCTATCC
817 ATCGGACCGGACCGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCC
16604610 CCGGCTTGCGCAT
881 CCGGCTTGCGCAT
* * * *
16604623 CCCGCCCCTCTGACCGGTTGAGCGCCCTCACGCTCGTTTCGTGGGTTGACTTAGACATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* ** * * * * *
16604688 TCATTCCCAATCTAAGCATACAAAGTTCATTCCCAGTCTAAGATCAGACTGAACCAAGGGTTACG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * *
16604753 GTAGCACATGTTGGGCTCGGGCATGTGCTGGTGTCACATTTTTCTTCGTCGGGGCACCATCGCCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * * *
16604818 GAGCATCGTCGGAG-ACCTGACCGGCGGCAATGGGGTTCTGGCGATCGAGGGGGTCGGGGGGGGT
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGGGC-CGGGGGGT
** * * **
16604882 GTAAGCACATGATGTGCGATGGGTTCTGGTACTTGGCCCTTATATTGGTCCCCTATTTCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
16604947 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * * * *
16605012 TTAAAGTGTTTGAAATGGAGACACTTTTTTGAAATGGTCACAAAATCTTGTACACTTTGACTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
*
16605077 TAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
** *
16605142 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* *
16605207 AAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTACGGGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
*
16605272 AGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* *
16605337 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCCTCCCGCCTGC
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTG-----CCCG-CT-C
* * * * * *
16605402 TTGTTTCATTGGTTGGCTTAGGTATACGCAGTTGATTCCCAGTCTAAGATCGGACTGGACCGAGG
771 --GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG
* * * * * ** * * **
16605467 GTTGTGGCAGCA-CAT-G-CTGGGCTCGGGCATTTGCTGGTGCTATATTTTTCTTCGTCGGGGCA
834 GTTGCGGCAGCAGGATCGAC--AGCAC--GCA---G-AGG-G--GGA-----C-CCGAC-GATC-
** *
16605529 CCATC-GCCAGAGCAT
880 CC--CGGCTTGCGCAT
*** * * * * **** * * *
16605544 CACCGGAGAACT-TGACCGACGGCATTG-GGGTTCCG-ACGATCGGGGGGTGTG-CGCACATGAT
1 C-CC-G-CCCCTCTG---GCCGGC--TGAGCG-CCCGCACGCTCGTTTCGTGGGTTG-AC-TTA-
* * ** * *** * **** * * **
16605605 GTGCGAT--GG-GTGC-TGGTACTTGGCTCTTC-TATTGGCCCCCTATCCCTCA-TCAAATCTCA
54 G-GC-ATACGGAGTTCAT--TCCCAGTCTAAGCATA-CGGAGTTC-ATTCC-CAGTCTAAGATC-
* ** *** *** * * * **** * ** *
16605664 AGAACTCATACC--CCCTTAAAG-AG--CAT-TTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
111 -GGAC-CGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCA--TGTGCTG-GTGTCG-CAT
*** ** *** * * * ** * * ** **
16605723 TAAAGTATT-TAAAAT-GGGGACACTTTTTTC--A-AATGGTCACAAAATCTTGTACACTTCAAC
170 T----T-TTCT-TCGTCGGGG-CACCATCGCCGGAGCATCGCCGGAGAA-CCTG-AC-CGGCGGC
** * **** ** * * ** * * * **
16605783 -TT----TT-TAGCTGAATTGTTTTGTAC-------ATGC-CAACA-AAAATAC-AAGGAT-CAC
225 ATTGGGGTTCCGGC-G-ATCGGGGGGGCCGGGGGGTGTGCGC-ACATGATGTGCGATGGGTGCTG
* * * *** ** ** ** ** * * * * *
16605831 GT-C-T--ACC-AAGT-TTGGGGCCAAAACTCGTTTCGAAAAAATTTTAAAAAATCTCGAACCGC
287 GTACTTGGCCCTTA-TATT-GGCCCCCTA-TC-CCTC-ATCAAACCTCGAGAACTCAC-ACCCCC
* * * * * *** * * * * *
16605890 --AAAAAG-TTTTGAAAATTGTGAAAAATAGAAAATG-AGTC-GTCTTGCCATGAAACT-TCACC
346 TTAAAGAGCATTTG-AGATT-T----TACAG-GTTTGCTGCCAG--TAGCCATTAAAGTGT---C
* * * * * * *
16605949 TGAAGGCTTAAGGGAC-CATTGTATGAATTTACAA--GCCATAAAAATGGCATTG-GCA-TGCAG
399 TGAA---AT-GGGGACAC-TT-T-T---TTCA-AATGGTCA-CAAAAT--C-TTGTACACTTC-G
* * * * *** ** ** * * *** ** * *
16606009 AAATATTAAGATG--TGCCTAAGCCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATC
448 -AGTTTTTAGCTGAATTTTTTTGTGCA--TGCCA-AC-AAAAAT--A---CAAG-G-ATCACGTC
* * * * **** * * *** ** ****** * *
16606072 T-CTCTGATCGGCTTAGTGCCCGCCCGCCCCTCCCGCCTACTTGTTTCGTTGGT-TGGCTTAGGC
501 TAC-C--A--AG-TTTGGGGCC-AAAACTCCTTCCGAAAAAAT-TTTAAAAAATCT--C-GA-AC
* *** **** ** * * * * * * * * **
16606135 ATACGCAG-TTC-ATTCCCAGTCTAAGATCGGACCGGACCGAG-GGT-TACGGCACACAGAGAGG
554 CTAAAAAGTTTCAAAAATCA-TGAAAAAT-AGA---AAACGAGTCGTCT--TGC-CA-TGAAACT
* * * * * * * * **
16606196 GCCCGGTCGATCCCCGGCTT--GCGTATC-TTGCCCTCTAGCTG-ACTGAGCACCACCGCATACT
610 TCAC-GT-GA----AGGCTTAAG-GGACCATTG-----TA--TGAATTTA-CA--AGC-CATAAA
** ** * ** ** * * * * ** * * *** *
16606257 CGTTTC-GTGGGTTGACTTAGGCATACGGAGTTCGTTCC-AGTCCTAAGCATA-CAGAGT-TCAT
657 AATGGCATTGGCATG-C--AGAAATATGAAGAT-GTGCCTAAACC-CA-CCTACCACCCTATC-G
* ** *** * * * **
16606318 ATCC-CAG-TGTAAG-AT----T-GGACTGGACCAAGG-GTTA-CGACAGCACAAATGCTGGGCT
715 ATCCACGGCT-TGCGCATCCCGTCTCTCTGG-CC--GGCG-TAGTGCCCGC-C---TGC-CCGCT
* * * *** * * * **
16606373 CGGCATGT-GTTGGTGCTGCCTTTTTC-TCAACCCGAG-GCACCATCGCCAGAGCATCGTGGGA-
770 C-G--TTTCGTCGGT--TGGCTTAGGCAT--A-CGGAGTTCA--TTC-CC--AG--TC-TAAGAT
* * * * * * ** ** * * **
16606434 -GAACCTGACCGGCAGGCATTGGGGTTCCGGC-CGATCGGGAGGGC-CGGGGGTGTGTGCACATA
819 CGGACCGGACC-G-AGG-GTTGCGG---CAGCAGGATCGACAGCACGCAGAGG-G-G-G-AC-CC
** * *
16606496 GAATGTGCGATGGGTGCTGGTCTTGGCCCTTATATGGT
873 G-A----CGAT---CCCCGG-CTT-GCGC----A---T
** * * * * ** * * * * ** *
16606534 CCC-CTATCCCTCATCAAAATCCTCAAGAACTCACCCCCCTTAAAGATCATTT-GAGATTTTACA
1 CCCGC---CCCTC-T-----GGC-C--G-GCTGAGCGCCC-GCACGCTCGTTTCGTGGGTTGAC-
* * * * ** * ** * ** * ** ** *
16606597 GGTT-TGC-TGCCCGTAG-ACATT-AAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACA
51 --TTAGGCAT--ACGGAGTTCATTCCCAGTCTAAG-CATACGG--AGTTCATTCCCA--GTC-TA
* ** * ** * * **** **** ** * *
16606658 AAATCTTATAC--ACTTCGAGTTTTTAGCTGAATTTTTTTATGCAT--GC-CAAAAAAAATACAA
106 AGATCGGA-CCGGAC--CGAG-GGTT-GCGGCA---GCACATGC-TGGGCTC-GGGCATGTGC-T
* * * * * *** * ** * ** ** ***** * **
16606718 GG-ATCAC-GTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAAT-TTTAAAAAATCCCAAA
160 GGTGTCGCATTTTTCTTCG-TCGGGG-CACCA-T-C-GCC-GGAGCATCGCCGGAGAA--CCTGA
**** * ***** ** * * ** * ** *** ** * *
16606780 CCAAAAAAG-TTTCAAAAAT-CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
217 CC--GGCGGCATT-GGGGTTCCG-G--CGATCG-----GGGGGGCCGGGGGGTG-TGC-GCACAT
* * * ** * * * * * * * ****
16606843 GAAG-GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG-CACGTAGAAAT
269 GATGTGC-GATGGGTGC--TG---GTACTT---GGCCCT---TAT---ATTGGCCCCCTATCCCT
* ** * * ** * * * ** **
16606906 -ATGAAGATGTGCCTA-AACCCACCTACCACCC-TATTGATCCA--CGA-CTTACGCATCCCGTC
319 CATCAA-ACCT--CGAGAACTCA-C-ACC-CCCTTAAAGA-GCATTTGAGATT--TTA-CAGGT-
* * *** * *** ** * * *** *
16606965 TCT-CTGGCCGGCATAGTGCC---CACCCGTCCG-CCCGCCCG-CTCGTTTTGTCGGTTGGCTTA
373 T-TGCT-GCCAG--TA--GCCATTAAAGTGTCTGAAATG-GGGACAC-TTTTTTCAAATGG-TCA
* ** * * * * * * ****** * **
16607024 GGC-ATA-CGGAGTTCA-TTCCCAG-TCTAAGATTAGATCAGACCGAG-AGTTGCGGCAAC-AGG
429 --CAAAATC-TTGTACACTT-CGAGTTTTTAGCTGA-ATTTTTTTGTGCA--TGC--CAACAAAA
* * ** **** ** * * * * ****** * *
16607083 AT-C--GGTAGCACATAGAGGGGGACT-CGGTCAAATCCTCGGCTTGCGCATCTCGCCCCTCTAG
485 ATACAAGG-ATCACGTCTACCAAGTTTGGGGCCAAA-ACTC--CTTCCG-A---AAAAATTTTAA
*** * **** ***** * * *** *** *
16607144 CCGA-CT-GAGCGCCCGTACGCTCGTTTCGTGGTTGACTTAGGCATACGGAGTTC-ATTCCCAGT
542 AAAATCTCGA---ACC-TA-AAAAGTTTCAAAAATCA-TGAAAAATA--GAAAACGAGT--C-GT
* * * * * * **
16607206 CTAAG-CAT-ACGGAGTTCATTC-T-CAGTC-TAAGATCGGA-C-TAG-ACTGAGGGTTACAGCA
596 CT-TGCCATGA--AACTTCA--CGTGAAGGCTTAAG---GGACCATTGTA-TGA-ATTTACA--A
***** * * ** * *** * * * * * *
16607263 GCTCATGCTGGTCTCAGGCA-TGTGCTGGTGTAGTATTTTTCTTCGCTGGGGCTCCACCCCGAAG
649 GC-CAT--AAAAAT--GGCATTG-GC--ATGCAG-AAATAT-GAAGATGTGCCT-AAACCC--AC
* ** * * * * * *
16607327 C-ATCACCGGA--GAACCTGGCCGACGGCATTTG-G-GTTCCGATGATCGACGGGGCCGGGGGGT
701 CTACCACCCTATCG-A--T--CC-ACGGC--TTGCGCATCCCG-T-CTC-TC-TGGCC--GGCGT
* * * ** * ** * * * * *** *
16607387 -GTGCGCACATG-ATG-TGCGATGGGTGCTGCT-ACTT-GGCCCTTATATTGG-CCCCCTATCCT
752 AGTGCCCGCCTGCCCGCT-CGTTTCGT-CGGTTGGCTTAGG--C--ATA-CGGAGTTCAT-TCC-
* ** ** ** * ** * *
16607446 TCA-TCAAACCTCGAGAACTCAAACCCCCTTAAAGAGCATTTGAGATTTTA-CAGGTTTGCTGCC
808 -CAGTCTAAGATCG-G-AC-CGGA---CC-----GAG-GGTTGCG---GCAGCAGG-AT-C-GAC
* * ** * * * * *** * *** * **
16607509 AGTA-GCCATTAAAGAG-TCTGAATGGGGACACTTTTTTCAAAT
854 AGCACG-CA-GAGGGGGACCCG-A-CGATCCCCGGCTTGCGCAT
** * *** ** *** * * ***** * ** ** * ** ***
16607551 GGTCACAAAATCTTGTACAATTCA-AGTTTTTA-G-TTGAATTTTTTTGTGCATGCCAAAAAAAA
1 -CCCGC-CCCTC-TGGCCGGCTGAGCGCCCGCACGCTCG---TTTCGTG-GGTTGAC-TTAGGCA
* * ** * **** **** * * *
16607613 TACAAGGA-TT-ATGGCTACCAAGTTTGGGGCCAAAAATCGTTC-TGAAAAAATTTTTAAAAATC
58 TAC--GGAGTTCAT---T-CCCAGTCT-AAG-CATACGGAGTTCAT--TCCCA-GTCT-AAGAT-
* * * ** ** * * ** ***** * *** * * * * * ***
16607675 CCGAAC-AACAAAAAGTTTC--AAAAATCATG-AAAAATAGAAAACGAG-TCGTCTTGCCATGAA
110 CGGACCGGACCGAGGGTTGCGGCAGCA-CATGCTGGGCTCGGGCATGTGCTGGTGTCG-CATTTT
* * * * * * * ** * * *****
16607735 ACTTC-AC-GGGAAGGCTTCAG--GGACCATTGTATGAATTTATAAGCCAT-AAAAATGGCATT-
173 TCTTCGTCGGGGCA-CCATC-GCCGGAGCATCG-CCG----GAGAA-CC-TGACCGGCGGCATTG
* * ** * ******** * * * * *
16607794 -GG--CAGGCAGATATATGAAGATGTGCCAAAACCCACCTAC-CACCCT-ATCAAT-CAACGGCT
229 GGGTTCCGGC-G--AT-CG--GGGGGGCC--GGGGGGTGTGCGCA-CATGAT--GTGCGATGG--
* * * **** * * * * ** *
16607853 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCTAACCGCTCATTTCATCGATTGGCTTAGGCA
281 -GTGC-T--GGT-ACT-TGGCCCTTATATTGGCC---CC-CT-A-TCCCTC-A-T--C--AAACC
** ** * ** * ** * * * * *
16607918 TACG-GAGTTCATTCGCAGTCT-AAGATCAAACT-AGA--TCAAAGG-TTG-TGACAGCAG-GAT
328 T-CGAGAACTCACACCCCCT-TAAAGAGC-ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*** ** * * ** *** *** **** * **
16607975 CGGCAG-CAC-GCAGAGGGGGACCCGACCGATCCCCGGTTGGCTCATCCCGCCCCTCTGGCCGGC
390 -TAAAGTGTCTG-AAATGGGGA--C-A-CTTTTTTCAAATGG-TCA---C-AAAATCTTG--TAC
* * ** ** * * * * ** *
16608038 TGAGCGTCCGCACGCTTATTTCG-TGGGTTGACTTAG-GCATACGGAGTTCATTCCCAAT-CTAG
442 --A-C-TTCG-A-G-TT-TTTAGCTGAATT-TTTTTGTGCATGC-CA--ACA---AAAATACAAG
* * * * ** ** * *** *** ** ** *
16608100 GCAT-ATGGAGTTCATTCCCAGTCTAAGATC-AGAC-CAGACCG--AGGGTTGGGCAGCACATGC
492 G-ATCA---CG-TC-TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATT--TTAAAAAAT-C
** **** * *** ** ***** * *** * * *
16608160 T-GGGCTCGGGCATGTGCTGGTGC-CGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGC
548 TCGAAC-CTAAAAAGT--T--T-CAAAAATCATGAAAAAT-AGAAAACGA--GTC-G-TC-TTGC
* * * * * * * * *** ** *
16608223 C-GGAGAACCTGAC-CGACGGCATTAGGGTTCCGACGATCGGGGGGCCGGGGGGTGTAC--GCAC
601 CATGA-AACTTCACGTGAAGGC-TTAAGG----GACCAT-----TG--TATGAATTTACAAGC-C
* ** * * * * * * * * * * *
16608284 AT-GATGTGAG-A-TGG-GTGCTGGTACT-TGGCCCTTATAT-TGGCCCCTTATCCCTCAT-CAA
652 ATAAAAATG-GCATTGGCATGC-AGAAATAT-G----AAGATGT-G--CCTAAACCCACCTACCA
* * ** * * *** * *
16608342 ACCT-TGAGAACTCACACCCCCGTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAA
707 CCCTAT-CG-A-TC-CA-CGGC-T--TGCGCA-TCCCG--TCT-C---TCTG--GCC-G--GC--
* ***** ** * ** *** * * ** *
16608406 TTAAAGTGTCTAAAATG-GGGACAC-TTTTTTCAAATGG-TCA--CAAAATC-TTGTTCCCTT-C
750 GT--AGTG-CCCGCCTGCCCG-CTCGTTTCGTCGGTTGGCTTAGGC-ATA-CGGAGTT-CATTCC
* * * * * ******* * ** ** * *
16608464 GAGTTTTTAGCT-GAATTTTTTTG-TGCATGCCAACAAAAATACAAGGATC-ACATCTAC-CAAG
808 CAG-TCTAAGATCGGACCGGACCGAGGGTTG-CGGC----A-GC-AGGATCGACAGC-ACGC-AG
* ** ******* * ** *
16608525 TTTGGGGGAAAAACTCCTTTCGA-AAAAATTTTAACAAAC
863 --AGGGGG----AC-CC-GACGATCCCCGGCTT-GCGCAT
** * ***** ****** * * * **
16608564 CCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCATAGAAACTT
1 CCCG--CC-------CCTCTGGCCGGC-TGAGCGCCCG--CACG-CTCGT-TT-CGT-G--GGTT
* * * * ** * * * * * *
16608629 CACGTGAAGGCTTAAGG-GACCATTGTACGAATTTACAAGCCATAAAAATGGCA-TTGGCATGTA
48 GAC-T-TAGGCATACGGAGTTCA-T-TCCCAGTCT--AAG-CAT----ACGG-AGTT--CAT-TC
** * * ** * ** * * ** **
16608692 GAAATATGAAGAT-GTG-CCTAAACCCA--CCTAC--CA-CCCTAT-C-GATC-CACG-ACT-TG
98 CCAGTCT-AAGATCG-GACC-GGACCGAGGGTTGCGGCAGCAC-ATGCTGGGCTCGGGCA-TGTG
** * * * * * * * * * * *
16608745 C--GCATCCCGTCTCTCTGGTCGACGTAGTGC-CCGACCGCCTGG-CCA-C-CCGCAAGCACGTT
158 CTGGTGTCGCATTTTTCT--TCGTCG--GGGCACC-ATCGCC-GGAGCATCGCCG-GAGAAC--C
* * * * ** * * * ****** *** * * **
16608804 TCATCGGTTGGC-TTAGGCATACGGAGTTCATTCCTAGCC-TAAGAT-T-AG-AC-T-A-GACCG
214 TGACCGG-CGGCATTGGGGTTCCGGCGATC-GGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * * * * * ** ** * ** **** * *
16608861 A-GGGTTAC-GGAAGTAGGATCAGCAACAAATAGAGGGGGACCCGATCGATC-T-TTGGCTTGCG
277 ATGGG-TGCTGGTACTTGG--C--C--C--TTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* * * *** **** * * * *
16608922 CA-TCCCGCCCCTCTGGATGGCTGAGCGCCCGCACGCTCTTTTCATGGGTTGACTTAGGCATACG
333 AACTCACACCCC-CT---T-AAAGAGCATTTG-A-GAT-TTTACA-GGTTTG-C-T--GC-CA-G
* * * ** * ** ** * * *
16608986 GAGTTCATTACCA--GTCT-AAGCATACGG--AGTTCATTCCCA--GTC-TAAGATC--GGACTA
383 TAG-CCATTA-AAGTGTCTGAA--ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC-A
** * *** * *** * *** * *** * ***
16609041 GATCGAGGGTTGCGGCAGCACATGCTGGGCTTGGGCATATGCTGGTGTCGCATTTTTCTTCG-TC
443 CTTCGA-GTTTTTAGCTG-A-AT--T-TTTTTGTGC--ATGC---CAAC-AAAAATACAAGGATC
** * * * ** **** * * *** ** ***
16609105 A-GGGTACC-A--TCGCCGG--AGAAC-CCGACCGGCGGCATTGGTGTTCCAGCGATCGGGGGGC
496 ACGTCTACCAAGTTTG-GGGCCAAAACTCCTTCC-GAAAAAAT--T-TT-AAAAAATCTCGAACC
***** * ** * * **** * * * * * *
16609163 TGGGGGGTGTGCGCACATGATGTGCGAT-G----GGTGCTGGTACTTGGCCCTTATA-TTGGC-C
555 TAAAAAGT-TTCAAAAATCATGAAAAATAGAAAACGAG-TCGT-CTT-GCCATGAAACTT--CAC
*** * **** * * * ** * * * *
16609221 GCCT-ATCCCTCATCAAACC-TCG-A-GAACTCACACCCCCT-TAAA-GAGCATTTG-A-G-A-T
614 G--TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG-GCATTGGCATGCAGA
** * * * * * ** * * *** * * *
16609276 TTTA-CAGGAT-TG-CT---TCCA-GTAGCCA--TTAAAG-TGTC-TGAAATGGGGA-CAC-T-T
676 AATATGAAGATGTGCCTAAACCCACCTA-CCACCCTATCGAT-CCACGGCTTGCGCATCCCGTCT
* *** * * *** ** ** * * *****
16609327 -T-T-G-AGAAATGGT-CACAAAT-CTTG-TACACTTCG-AGGTT---TTAGCTGAATTTTTTTG
739 CTCTGGCCGGCGTAGTGCCCGCCTGCCCGCT-CGTTTCGTCGGTTGGCTTAG--GCA-TACGGAG
* * * * * * * * * ** ** *
16609381 TGCA-TGCCA-ACAAAAATACAAGGATCACGTCTACC-AAGCTTGGGGC--CAAAACTCCTTCTG
800 TTCATTCCCAGTCTAAGAT-C--GGA-C-CG--GACCGAGGGTTGCGGCAGCAGGA-T-CGACAG
* *** * **** * ***** * **
16609441 AAAAAATTTTA-AAAAATCTCGAACTG-TAAAAAG-TTTCAAAAAT
856 CACGCA---GAGGGGGA-CCCG-AC-GATCCCCGGCTTGC--GCAT
** **** * * ** *** ** * * *
16609484 CATGAAAAATAAAAAATGAGTCATCTTGCCATGAAACTTCACG-TGAAGGTTTAAGGGACCGTTG
1 CCCG-CCCCT-----CTG-GCCGGC-TG--A-GCGCCCGCACGCT---CGTTT-CGTG---G--G
* ** ** * * ** * * * * **
16609548 TATGAATTTACAATCCATA-AAAATGGCATTGGCA--CTTAGAAATATGAAGATGTGCCTAAACC
46 T-TG-ACTT---AGGCATACGGAGT-TCATTCCCAGTCTAAG-CATACG--GA-GT-TC-ATTCC
* ** * ** * * * * * ** * *
16609610 CA-CCTACCACCCTATC-GATCC-ACGGCTTAC-ACATCTGATC-TTTTTGGC-C-GGCGTAGTG
99 CAGTCTAAGATCGGACCGGA-CCGA-GGGTTGCGGCAGC--A-CATGCTGGGCTCGGGCAT-GTG
* * * ** * * *
16609668 CCCGCCCGCCCGCCCGC-TCATT-TT-GTCAGTTGGCTTATGCAT--ACGGAGTTCATTC-CC--
158 -CTG---G--TG-TCGCATTTTTCTTCGTC-G-GGGC--A-CCATCGCCGGAG--CA-TCGCCGG
* * * * * * * ** *
16609725 AG--TCTAAGATCGGACGGAACTGAGGGTTACAGCAGCA-CATGCTGGGCTCGGGCATGTGCTGG
208 AGAACCT--GACCGG-CGGCATTG-GGGTTCCGGC-G-ATC-GGGGGGGC-CGGG---G-GGT-G
* * * * * * ** ** * ******
16609787 TGCCGTATTTTTCTTCGCTGGGGCACCATCGTCGGGGTTCCAGTGATCGGGGGGGCCAGGGGGTG
260 TG-CGCA-----CAT-GAT-GTG--CGA---T--GGGTGCTGGT-A-C--TTGGCCCTTATATTG
* * ** ** ** * *** * ** *
16609852 TGCGCACATGATGTGCGGTGGGTGCTGGTACTTTGCCCTTATATTGGCCCCCTATCCTTCATCAA
306 -GC-CCCCT-A--T-CCCT-CAT-C--AAAC-CT--CGAGA-ACTCACACCC---CCTT-A--AA
* * ** * ** * * *** *** *
16609917 -ACCA--CGAGAACTCACACCCCCTTAAAG-AGCGTTTGAGATTTTACAGGTTTGCTGCCAGTAG
351 GAGCATTTGAGATTTTACA---GGTT--TGCTGCCAGT-AGCCATTA-AAG--TG-T--C--T-G
* *
16609978 CCATTAAAGTATTTGAAATGGG-GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
401 ------AA--A--TG----GGGACAC-TTT-TTTCAAATGGTCACAAAATCTTGTACACTTCGAG
* * ** *
16610042 TTTTTAGCTGAATTCTTTTGTCCACACCAACAAAAGTACAAGGATCACGTCTACCAAGTTTGGGG
450 TTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGG
* * * *
16610107 CCAAAACTCCATCCGAAAAAATTGTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCATGAAA
515 CCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAA
* * *
16610172 AATAGAAAACGAGTCGTCTTGACATGAAACTTCGCGTGAAGTCTTAAGGGACCATTGTATGAATT
579 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
* *
16610237 TACAAGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTGCCAAAACCCACCTACCACC
644 TACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * * *
16610302 CCATCGATCCACGGCTTGCGCATCCCGTCTTTCTAGCCGGTGTGGTGCCCGCCCGCCCGCCCGCT
709 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCTGCCCG--
* * * * * **
16610367 CGTTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGCCTTAGATCAGACCAGAGTG
768 C--TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * * * *
16610432 AGGGTTACGGTAGTAGGATC-AGCAGCATGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCAT
831 AGGGTTGCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * *
16610496 CCTGCCCCTCTGGCCGGTTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
*
16610561 TCATTCTCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTCGAGGGTTGC
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC-CGAGGGTTGC
* * *
16610626 GGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTTGTCGGGGCACCAT---C
130 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
* * *
16610688 ---G--T---CGGAGAACCTGACCGACGGCATTGGAGTTTCGGCGATC-GGGGGGCCGGGGGGTG
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
* *
16610744 TGTGCACATGATGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
*
16610809 ACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
16610874 TAAAGTGTCTGAAATGGGGACAC-TTTTTCAAATGGTCACAAAATCTTGTATACTTCAAGTTTTT
390 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * * * *
16610938 AGCTAAATTTTTTTATACGTGCCAACAAAAATACAAGGATCACATCTACAAAGTTTGGGGCCAAA
455 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * *
16611003 ACTCCTTTCAAAAAAATTTTAAAAAATCCCG-ACTCGTAAAAAGTTTCAAAAATCGTGAGAAATA
520 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAC-C-TAAAAAGTTTCAAAAATCATGAAAAATA
* *
16611067 GAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTTTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * *
16611132 AGCCATAAAAATGGCATTGGCACGCTGAAATATGAAGATGTGCCTAAACCCACGTACCACCCTAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * *
16611197 CGATCCATGGCTTGCGCATCCCGTTTCTCTGGCCGGCGCAGTGCCCGCCCGCCCGCCCGCCCGCT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT--------GCCCGCCTGCCCGCT
* * * *
16611262 CGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCTAAGATTGGACCAGACCGAGGG
770 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGG
* * ** *
16611327 TTGCGGCAGC---AT---------GTAGAGGGGCACCCGACCGATCCCTAGCTTGTGCAT
835 TTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* *
16611375 CCCGCCCCTCTAGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * ** * * *
16611440 TCATTCCCAGTCTAAGCACACGAAATTCATTCCCAGTCTAA-ATTAGATCAGAGCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16611504 GTAGCACATGCTAGGCTCGGGCATGTGTTGGTG-CTGCATTTCTCTTCGTCGGGGCACCATCGTC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * ** *
16611568 GGTGCATCGCCGGAGAACTTGACCGACGGCATTGGGGTTCTGATGATCGAGGGGGCCGGGGGGGT
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGT
* * * *
16611633 GTGTGCACATGATGTGCGATGGGTGCTGGTTCTTAGCCCTTATATTGGCCCCCTATCCGTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
16611698 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
16611763 TTAAAGTGTCTGAAATGGGGACACTTTTTTCATATGGTCACAAAATCTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * ** *
16611828 TAGCTGAATTTTTTTGTGCATGCAAAAAAAAATACAAGGATCATATCTACCAAGTTTGGGACCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * * *
16611893 AAATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTTAAAAATCGTGAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* * * * *
16611958 AAAAATGAGTCATCTTGCGATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * *
16612023 AGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCCAT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * * *
16612088 CGATCCACGGCTTGCGCATCCCGTCTTTCTAGCCGGTGTGGTGCCCACCCGCCCGCCCGCTCGTT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG----CCCGCCTGCCCG--C--T
* * * * ** * **
16612153 CGTTTTGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGCCTTAGATTAGACCAGAGTGAGGG
770 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGG
* * * * *
16612218 TTACGGTAGTAGGATC-AGCAGCATGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCAT
835 TTGCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * *
16612278 CCTGCCCCTCTGGCCGGTTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * ** * * *
16612343 TCATTCCCAGTCTAAGCACACGAAATTCATTCCCAGTCTAA-ATTAGATCAGAGCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16612407 GTAGCACATGCTAGGCTCGGGCATGTGTTGGTG-CTGCATTTCTCTTCGTCGGGGCACCATCGTC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * ** *
16612471 GGTGCATCGCCGGAGAACTTGACCGACGGCATTGGGGTTCTGATGATCGAGGGGGCCGGGGGGGT
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGT
* * * *
16612536 GTGTGCACATGATGTGCGATGGGTGCTGGTTCTTAGCCCTTATATTGGCCCCCTATCCGTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
16612601 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTCTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * * * *
16612666 TTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGGCTCAAAATGTTGTACACTTTGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
16612731 TAGCT-AAATTTTTTGTGCTTGCCAACAAAAATAAAAGGATCATGTCTACCAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * *
16612795 AACTCCTTCCGAAAAAATTTTAAAAAATCACGAACCGCAAAAAGTTTCAAAAATCGTGACATATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* * * *
16612860 GAAAATGAGTTGTCTTGCCTTGAAACTTCACGTGAAGGCCTAAGGGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * * *
16612925 AGCCATTAAAATGGTATTGGCATGCAGAAATATGAAGATGTGCCTAAATCCACCTACCACCCGTC
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-TA
* * * ** * *
16612990 TC--TCTAAC--C--G-GCGT--AGTGAC-C--GCC--C-----GCCCG--T--CCGCTCATTCC
712 TCGATC-CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTC
* * * * *
16613032 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAAGCGAGGGTTGTGG
776 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * ** * * * * *
16613097 CAGTAAGATCGGTAGCATGCAGAGAGGGACCCGGTCGATCCTCGGCTCGCGCAT
841 CAGCAGGATCGACAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGCGCAT
* * * * * *
16613151 CCAGCCCCTCTGGCTGGCTGAGCACCCGCACGGTCATATCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
** *** *
16613216 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGATTAAGGTTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * ** * * **
16613281 GCAGCACATGCTAGGCTCGAGCATGTGTTGGTGCCATATTTTTCTTCATCAGGGCACCATCATCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* *
16613346 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGAGGGCCGGGGGGGGT
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--GGGGGGT
* *
16613411 GTGCGCACATGATGTGTGATGGGTGCTGGTA-TTGGCCCCTATATTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16613475 AACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACTGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16613540 TTAATGTGT-TCGAAATGGGGACACTTTTTCCAAATGGTCACAAAATGTTGTACACTTCGAGTTT
389 TTAAAGTGTCT-GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * * * * *
16613604 TTAGC-GAAATTATTTTGTGAATGCCAAAAAAAATAAAAGGATAACGTCTACCATGTTTGGGGCC
453 TTAGCTG-AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
* *
16613668 AAAACTCCTTTCGAAAAAATTTTAAAAAATCCCG-ACTCGTAAAAAGTTTCAAAAATCATGAAAA
517 AAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAC-C-TAAAAAGTTTCAAAAATCATGAAAA
16613732 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
580 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
*
16613797 ACAAGCCATAAAAATGGCATTGGCATGCTGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
645 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
*
16613862 TATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGCTC
710 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCTGCCCGCTC
* * * * * * **
16613927 GTTTCGTCGGTCGGCTTAGGCTTATGGAGTTCATTCCCAGTCTTAGATCAGACCAGAGTGAGGGT
771 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGT
* * * * *
16613992 TACGACAGTAGGATCTG-TAGCACGCAGAGGGGGAACCGATCGATCCCCGGCTTGCGCAT
836 TGCGGCAGCAGGATC-GACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* ** * * * *
16614051 CCTGCCCCTCTTTCCGGCTGAGCACCCGTACGCTCGTTTCATGGGTTGA-TTGAGGCATAC-AAG
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT-AGGCATACGGA-
* *
16614114 GTTTATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTG
64 GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG
** * * * * *
16614179 CGGCAGCACATGCTGGGCTCCAGCGTGTGTTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGT
129 CGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGC
* * *
16614244 CGGAGCATCGCCGGAGAACCTGACCGACGGAATTGGGGTTCCGACGATC-GGGGGGCC-GGGGGT
194 CGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGT
* *
16614307 GTGCGCACATGATGTGCGAGGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCTCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
16614372 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTCTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * * * *
16614437 TTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGGCTCAAAATGTTGTACACTTTGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
16614502 TAGCT-AAATTTTTTGTGCTTGCCAACAAAAATAAAAGGATCATGTCTACCAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * *
16614566 AACTCCTTCCGAAAAAATTTTAAAAAATCACGAACCGCAAAAAGTTTCAAAAATCGTGACATATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* * * *
16614631 GAAAATGAGTTGTCTTGCCTTGAAACTTCACGTGAAGGCCTAAGGGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* *
16614696 AGCCATTAAAATGGTATTGGCATGCAGAAATATGAAGATGTGCCT-AA---A--T-CCA--C---
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
** *
16614749 C--T--A-------C-CA-CCCGTCTCTCTAACCGGCGTAGTGCCCGCCCGCCCG-TCCGCTCAT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCT-CG-T--T
* * * *
16614800 TCCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAAGCGAGGGTTG
774 T-CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG
* * * ** * * * * *
16614865 TGGCAGTAAGATCGGTAGCATGCAGAGAGGGACCCGGTCGATCCTCGGCTCGCGCAT
838 CGGCAGCAGGATCGACAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGCGCAT
* * * * *
16614922 CCAGCCCCTCTGGCTGGCTGAGCACCCGCACGCTCATATCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
**
16614987 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATTGGACCGAGGGCTTGC
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGG-TTGC
* * * *
16615052 -GCAGCACATGCTGGGCTCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTC-GGGCACCATCGTC
130 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * * * * * ** *
16615115 GGAGCATCACCGGAGAACTTGGCCGACGACATTGAGGTTTCGACGATCAAGGGGG-CTGGGGGTG
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
* *
16615179 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATACTAGG-CCCCTGTCCCTCATCA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA-TTGGCCCCCTATCCCTCATCA
*
16615243 AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
16615308 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16615373 TAGCTGAATTTTTTTATGCATGCCAA-AAAAAAAAAAGGATCACGTCTACCAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
16615437 AACTCCTTCTGAAAAAATTTTAAAAAATC-CAAAACCACAAAAAGTTTCAAAAATCATGAAAAAT
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACC-TAAAAAGTTTCAAAAATCATGAAAAAT
* * *
16615501 GGAAAACGAGTCGTCTTGCCATTAAACTTCACGTGAAGACTTAAGGGACCATTGTATGAATTTAC
582 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* *
16615566 AAGCCATAAAAATTGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCGT
647 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-T
* * ** *
16615631 CTC--TCCA--G--T-CG----GCG--T-AGT-G-C--C----TGCCCGCCTGCCCGCTCGTTCC
711 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTC
* ** **
16615674 ATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCGGAGTGAGGGTTTGCG
776 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGG-TTGCG
* * * * * * * *
16615739 GCAGCA-GATTGGCAGCATGCAAAGGAGGACCGGCCGATCCCTGGCTTGCGCAT
840 GCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACGATCCCCGGCTTGCGCAT
* * *
16615792 CCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGAGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * *
16615857 TCATTCCCAGTCTGAGCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16615922 GCAGCACATGTTGGGCTCGGGCATGTGTTGGTG-CTGCATTTTTCTTCGCCAGGGCACCATCGTC
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * * * * *
16615986 GGAAGCATCACCGGAGAACCTGACTGACAGCATTGGGGTTTCGACGATC-CGGGGGCCGAGGGGT
195 GG-AGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGT
*
16616050 GTGCGCACATGATGTGCGATGGGTGCTGGTACCTGGCCCTTATATTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16616115 AACCTTGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16616180 CTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGGCTCAAAATCTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * * * *
16616245 TAGCTGAATTTTTTTGTGCTTGCCAAAAAAAATAAAAAGATCATGTGTACCAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * **
16616310 AACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* * *
16616375 GAAAATGAGTCGTCTTACCATGAAACTTCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
*
16616440 AGCCATAAAAATGGCAGTGGCATGCAGAAATATGAAGATGTGCCT-AA---A-CT--CA-CC--T
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * ** *
16616495 --A-CCAC--C---CG--T----T-TCTCTAGTCGGCGTA-T---TACCTGCCCGCTCGTTCCGT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCGT
* * * ** *
16616541 CGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGATC-GAGTGAGGGTTGCAGCA
778 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCA
* * * *
16616605 GCAGGATCGGCAGCATGCAGAGGGGGACCCGGCCGATCCCCGGCTTGTGCAT
843 GCAGGATCGACAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGCGCAT
* * *
16616657 CTCGCCCCTCTGGCCAGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * * *
16616722 TCATTCCCAGTCTAAGCACACAGAATTCATTCCCAGTCTAA-ATCAGACCAGACCGAGGGTTACG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * * * ** *
16616786 GTAGCATATGATGGGCTCGAGCATGTGTTGGTGCCGCATTTTTCTTCACCAGGGCACCATCGCCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * * ** *
16616851 GAGCATCACCGGAGAACCTGATCGACGGCATTGGGGTTTCGATGATCGAGGGGGCCGGGGGGGTG
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTG
* * * *
16616916 TGCGCACATGATGTGTGATGGGTACTGGTTCTTGGCCCTTATATTGGCCTCCTATCCCTCATCAA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
16616981 ACCTCAAGAACTCACACCCCCTTAATGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
325 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
16617046 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
390 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * *
16617111 AGCTGAATTTTTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCTACAAAGTTT-GGGTCAAA
455 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * ** *
16617175 ACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAG
520 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATAG
* * *
16617240 AAAATGAGTCGTCTTGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAG
584 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
*
16617305 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTTATC
649 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * * *
16617370 GATCCA-TGCTTGCGGATCCCGTCTCTCTGGCCGGTGTAATGCCTACCCGCCCGCCGCCTGCTCG
714 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGT-A-G--TGCCCGCCTG-C-CC-GCTCG
* * * * *
16617434 TTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTTAGATCAGACCAGACCAAGGGTT
772 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTT
* * * * * *
16617499 ACGACAGCAGGATC-AGTAGCACGCAGAGGGGAACCCGACTGATCCCTGGCTTGTGCAT
837 GCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGAC-GATCCCCGGCTTGCGCAT
* * * * * *
16617557 CCCGCCCTTTTGGCCGACTGAGCACCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACAGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * ** *
16617622 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGACCGGATCAAATCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * * * * *
16617687 GCAGCACATGCAGGGC-CTGAGCATGTGTTGGTGCCACATTTTTCTTCGTTGGGGCACCATTGTC
131 GCAGCACATGCTGGGCTC-GGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * *
16617751 GGAGCATCGCCGGAGAACCTGACCGACGACATTGGGGTTCCGACGATCGGGTGAGCCGGGGGGTG
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
* *
16617816 TGCGCACATGATGTGCGATAGGTG-TCGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCA
260 TGCGCACATGATGTGCGATGGGTGCT-GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16617880 AACCTCGAGAACTCACATCCCCTTAAAGAGAATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16617945 TTAATGTGTCTAAAATGGGGACACTTTTCTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16618010 TAGCTGAATTTTTTTTGTGCACGCCAACAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGTCA
454 TAGCTGAA-TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* * * * * *
16618075 AAATTCCTTCCGAAAAAATTTTCAAAAATCCCGAACCACAAAAAGTTTCAGAAATCGTGAAAAAT
518 AAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAAT
* * * **
16618140 AGAAAACGAGCCATCTTGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTACAAATTTAC
582 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* *
16618205 AAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
647 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * * * **
16618270 TCTATCCACGGCTTGCGCATCCTGTCTCTTTGGCCGGCGTAGTGCTCGCCCACCCGCTCGTTTCG
712 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCG
* * * * * *
16618335 TCAGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGTTCAGACCAGACCGAGGGTTGCGGT
777 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* * * * *
16618400 AGCAGGATCGATAGCACGCAGAGGGAGACCCGACCTATCCTCGGCTTACGCAT
842 AGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * * *
16618453 CCCACCCCTCTGGTCGACTGAGCACCCGCACGCTCCTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
*
16618518 TCATTCCCAG--T---C-TA---AG---------A---T----T-GGACTGGACCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* *
16618557 GCAGCACATGCTGGGCTCGGGCATGTGTTGGTGTTGCATTTTTCTTCG-CTGGGGCACCAT---C
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTC-GGGGCACCATCGCC
* * * * * * * *
16618618 ---G--T---CGGAGAACTTGATCGACGACATTGGGTTTTCGACAATCGGGGGGGCCGGGGGGGT
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGT
* *
16618675 GTACGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
16618740 ATCCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16618805 TTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTACAAGGATCACGTCTAC
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT---TGTA-CAC-T-T--
* *** ** ** ** * * ** * * **
16618870 CAAGTTTGGGGCCAAAACTCCTT-T--A-G--AA-AAAATTTTTAAAAAAATCCCGAACCGTAAA
446 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA---ATACAAGGATCACG--TC-TACC
* ** * *** * *
16618928 AAGTTT-----CAAAAAT-CTT--G-AAAAA-TAGAAAACGAGTCGTCTTGCC-ATGAAACTTTA
505 AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA--AATC-TCGAACCTA-AAAAGTTT-
*** * * ** * * * * * ** ** * * *
16618982 CGTGAAGGCTTCAGGGACCATTG--TATGAAT-TTACAAGCCAT-AAAAATGACATTGGAA--CG
565 C---AA-AAATCATGAAAAATAGAAAACGAGTCGT-CTTGCCATGAAACTTCAC-GT-GAAGGCT
* * * *** * * * *** *
16619041 T-A--GA-AATATG-AAGATATGTCTA-AACCCA-CCTACT-ACCTT---AT-C-GATCCACG--
623 TAAGGGACCAT-TGTATGA-AT-T-TACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* ** * * * * * * * **
16619091 GCT-TGCGC-ATCCCGTCTCTCTGGCCA-GC-ATAG-TGCC-CGCCCGTCCGTCCGCCCGCTCGT
684 GATGTGC-CTAAACC--CAC-CT-ACCACCCTATCGAT-CCACG-GCTTGCG-CATCCCG-TC--
* * ** * *** ** * * * ** *
16619150 TTTGTCGGTTGGCTTAG-G--CATATG-GAGTTCATTCCCAGTC--TAAGATT-GGACCGA-ACC
738 TCTCT-GGCCGGCGTAGTGCCCGCCTGCCCGCTCGTT-TC-GTCGGTTGGCTTAGG--C-ATA-C
* * * * * * * * ** *** ** *
16619207 GAAGGT--TGCGGCA--ATAGGATCAGTAGCACGTAGTGAGGGACCCGGC--C--GATCCCCGGC
796 GGAGTTCATTC-CCAGTCTAAGATC-GGA-C-CGGACCGAGGGTTGCGGCAGCAGGATCGACAGC
** ***** ** ** *
16619264 TTGC-GCA-TCCTTCCC--CTCTGGCCGGC-TGAGCA-
857 ACGCAG-AGGGGGACCCGACGATCCCCGGCTTGCGCAT
* * ** * **** ** * ***** * *
16619296 CCCGCACGCTCATTTCGTGGGTTGA-CTTAGGCATACG-GAG-TTCATTCCCAGTC-TAAGCATA
1 CCCGC-C-C-C-TCTGGCCGGCTGAGCGCCCGC--ACGCTCGTTTCGTGGGTTGACTTAGGCATA
16619357 CGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C----A---GACC-G--C--GG
60 CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG
* *
16619396 GTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGTCGCATTTTTCTTCGTCGAGGCACCA
125 GTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCA
* * * ** * **
16619461 TCACC--A--A-------AGAACTTGACCAGCGATATTGGGGTTTCGGCGATCGAAGGGGCCGGG
190 TCGCCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGG
* * *
16619515 GGG-GTACGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTACCCCTC
255 GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
* *
16619579 ATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTA
320 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
* *
16619644 GCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTGGTACACTTCGAG
385 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
* * * *
16619709 TTTTTAGCTGAATTTTTTTGTGCATGCCAAGAAAAATACAAGGATCATGTCTACGAAGTTTCGGG
450 TTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGG
* * *
16619774 CCAAAAATCCTTCCGAAAAAATTTTAAAAAATCTC-AACCCGTAAAAAGTTTCAAAAATCGTGAG
515 CCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAA-CC-TAAAAAGTTTCAAAAATCATGAA
*
16619838 AAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
578 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
* ** *
16619903 TTACAAGCCATAAAAATGGCATTGGCACGTGGAAATATGAAGATATGCCTAAACCCACCTACCAC
643 TTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * * *
16619968 ACTATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCAGACGTAGTGCCTGCCCGCCCACGCGC
708 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G--TGCCCG--C-C-TGC
* ** * * * * **
16620033 CCGCTCGTTTCGTCGGTCGGCTTAGGTTTACGGAGTTCATTCCCTGTCTTAGATCAGACCAGAGT
765 CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
* * * *
16620098 GAGGGTTACGGCAACAGGATC-AGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGTA
830 GAGGGTTGCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCA
16620162 T
893 T
* * * * *
16620163 CCTGCCCCTCTGGCCGGTTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * *
16620228 TCATTCTCAGTCCAAGCATAGGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * *
16620293 GCAGCACATGCTAGGCTCGGGCATGTGTTGGTGCCGTATTTTTCTTCGTCGGGGCACCAT-----
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* ** * *
16620353 --G----GCCGGAGAACCTGACCGACGGCATTGGATTTTCGGCGATCGGGGGGGCCGAGGGGTGT
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGT
* *
16620412 GCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTACCCCTCATCAAA
261 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
*
16620477 CCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
326 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
*
16620542 AAAGTGTCTAAAATGGGGACACTTTTTTCAAAT-GTCACAAAATCTTGTACACTTCGAGTTTTTA
391 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * * *
16620606 GCTGAATTTTTTTATGCGTACCAACAAAAATACAAGGATCACATCTACGAAGTTTGGGGCCAAAA
456 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * *
16620671 CTCCTTCCAAAAAAATTTTAAAAAATC-CCAACTCGCAAAAAGTTTCAAAAATCATGAGAAATAG
521 CTCCTTCCGAAAAAATTTTAAAAAATCTCGAAC-C-TAAAAAGTTTCAAAAATCATGAAAAATAG
*
16620735 AAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
584 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * *
16620800 GCCATAAAAATGGCATTGGCACGCTGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATC
649 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
** * * *
16620865 GATCCATTGCTTGCGCATCCTGTCTCTCTGGCCGACGTAGTGCCCGCCCACCCGCCCACCCGCTC
714 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG----CCTG----CCCGCTC
*
16620930 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGT
771 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGT
* * * * * * *
16620995 TGCGGTAGCAGGATCGGCAGCATGTAGAGGGGGACCCGGTCGATCCTCGGCTTGTGCAT
836 TGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGCGCAT
* * *
16621054 CCCGTCCCTCTGGCCGG-T-------TGCACGCTCGTTCCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * * *
16621111 TCATTCTCAATCTAAGCATACGAAATTCATTCCCAGTCTAA-ATCAGACCAGACCGAGGGTTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * * **
16621175 GTAGCATATGCTGGGCTCGAGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCATCG
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * * * * *
16621240 GAGCATTGCCGGAGAACCTGACCGACGACATTGGGGTTCCAGTGATCGAGGGGGCCAGGGGGTGT
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGT
* * * * *
16621305 GCGCACTTGGTGTGCGATGGGTTCTGGTTCTTGGCCCTTATATGGGCCCCCTATCCCTCATCAAA
261 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
16621370 CCTCGAGAACTCACGCCCCCTCAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
326 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
16621435 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
391 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
16621500 GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
456 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * * * *
16621565 CTCCTTTCAAAAAAATTTTAAGAAATCCCGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGA
521 CTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATAGA
* *
16621630 AAACAAGTCGTCTTGCCACGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
585 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
16621695 CCATAAAAATGGCATTCGCATGGAGAAATATGAAGATGTGCCAAAACCCACCTACCAACCC-ATC
650 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACC-ACCCTATC
* * * * *
16621759 GATCCACGGCTTGCGCATCCCATCTTTCTGGCCGGTGTGGTG--C-CC-GCCCGCTCGTTTTGTC
714 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCGTC
* * * * * *
16621820 GGTTAGCTTAGGCATATGGAGTTCATTCCCAGCCTAAGATCAGACCGAACCGAGGGTTGCGGTAG
779 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAG
* ** * * * **
16621885 TAGGATCGGTAGCACGCAGATGGGGACCCGACCGATCCCCGACTTGGGTGT
844 CAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * * * * ** *
16621936 CCCACCCCTCTGGCCGACTGAGCACCCGTACGCTCGTTTCATGGGTTGACTTAGGCATACAAAAT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * * * *
16622001 TCATTCCTAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATC-GAGCTGGATCGTGGGTTGC
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGA-CCGGACCGAGGGTTGC
* * * * * *
16622065 AGCAGCACATGCTGGGCTCGGGCATTTGTTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCGTC
130 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
* * *
16622130 GAAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCTGGCGATCGGGGGGGCCGGGGGGTG
195 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG
* *
16622195 TGCGCACATGATGTGTGATTGGTGCTGGTACTTGGCCAC-TATATTGGCCCCCTATCCCTCATCA
260 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCC-CTTATATTGGCCCCCTATCCCTCATCA
* * *
16622259 AACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACTGGTTTGTTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16622324 TTAATGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
** * * *
16622389 TAGCAAAATTTTTTTGTGCATGCCAAAAAAAATATAAGGATCACGTCTACTAAGTTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
16622454 AACTCCTTCCGAAAAAATTTTAAAAAATCTTGAACCACAAAAAGTTTAAAAAATCATGAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
* * *
16622519 GAAAACGAGTTGGCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * * * *
16622584 AGCCATAAAAAGGGC-TTGGGCACGTAGAAATATGAAGATGTTCCTAAACCCACCTACCACCCCA
648 AGCCATAAAAATGGCATT-GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * **
16622648 TCGATCCACGGCTTGCGCATCCCGACTCTCTGGCCGGCGTAGTGCCCGCCCGCCCATTCGTTTCG
712 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCG
* * * * * **
16622713 TCAGTTGGCTTAGGCATACGGAGTTCATTCCCTGTCTAAGATCGGACCGGAACAAAGGTTGCGAT
777 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGC
* * *
16622778 AGCAGGATTGACAGCACACAGAGGGGGACCCGACCGATCCCCGACTTGCGCAT
842 AGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CGATCCCCGGCTTGCGCAT
* * *
16622831 CTCGCCCCTCTGGCCGGCTGAGCACCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16622896 TCATTCCCAGTCTAAG-AT-C-G-G---------A--C------C--A---GACTGAGGGTTGCA
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * * *
16622935 GCAGCACATGCTAGGCTGGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCTGGG---CA---CC-
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * ** * *
16622993 --G--TCGTCGGAGAACCTGACCTGCGACATTGGGGTTCCAACGATCGGGGGGG-CTGGGGGTGC
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGT
* * **
16623053 ACGCACATGATGTGTGATGGGTGCTGGTACTTCACCCTTATATTGGCCCCCTATCCCTCATCAAA
261 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
16623118 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
326 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* *
16623183 AAAGTGCCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTA
391 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * * *
16623248 GCTGAATTTTTTTATGCCTGCCAACAAAAATACAAGGATCATGTCTAACAAGCTTGGGGCCAAAA
456 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * * *
16623313 CTCATTTCGAAAAAATTTAAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCGTGAAAAATAGA
521 CTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATAGA
* * * *
16623378 AAATGAGTCATCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATATACAAG
585 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * * *
16623443 CCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTTCCTAAACCCACCTACCACCCCATCG
650 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * *
16623508 ATCCATGGCTTACGCATCCCGACTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCATTCGTTTC
715 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCG--C--TCGTTTC
* * * * *
16623573 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCTGTGTAAGATCAGACCAGACCAAGGGTTG-GG
776 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * *
16623637 ACAGCAGGATCGATC-GCACGCAGAGGGGGACCGGCCGAGCCCCGGCTTGCGCAT
841 -CAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGACGATCCCCGGCTTGCGCAT
* * **
16623691 CCCGCCCATTTGGCCGGCTGAGCAACCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
16623756 TCATTCCCAGTCTAAG-AT-C-G-G---------A--C------C--A---GACTGAGGGTTGCA
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
* * * *
16623795 GCAGCACATGCTGGGCTGGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCTGGGCA-C-T-----
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * *
16623853 --G--TCGTCGGAGAACCTGACCTGCGGCATTGGGGTTCCGACGATCGGAGGGGCCGGAGTGGGT
196 GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGG-G-GGGT
* * * **
16623914 GCGCGCAGATGATGTGTGATGGGTGCTGGTACTTCACCCTTATATTGGCCCCCTATCCCTCATCA
259 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
16623979 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTGCAGGTTTGCTGCCAGTAGCCA
324 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
16624044 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTT
389 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16624109 TAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGCTTGGGGCCAA
454 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
16624174 AACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATAAAAAATA
519 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATA
** * * * * *
16624239 GAAAGTGAGTCATCTTGCCATAAAACTTCACATGAAGGCTTAAGGGACCGTTGTATGAATATACA
583 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * * * *
16624304 AGCGATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGGCTAAACCCACCTACCAACC-AT
648 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * * *
16624368 CGATCCACGACTTGCGCATCCGGTCTCTCTAGCTGACGTAGTGCCCGCCTGCCCGCCCGCCCACT
713 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCT----GCCCG----CT
* * * * * *
16624433 CGCCCGTTCATTTCCTTGGTTGGCTTAGGCATACAGAGTTCATTCCCAATCTAAGATCAGACCAG
770 ----CG----TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGG
* *** * *
16624498 ACTGAGGGTTGCTATAGCAGGATC-AGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGC
827 ACCGAGGGTTGCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCC-GACGATCCCCGGCTTGC
*
16624562 ACAT
890 GCAT
*** * * * *
16624566 CCCGTAACTCTGGCCGGCTGAGCACCCGCACGCTTGTTTCGTGGGTTGACTTTGGCATAGGGAGT
1 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* * ** *
16624631 TCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAGACTAGACCGAGGGCTGCG
66 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
** * * *** * * *
16624696 ATAGCACATGCTGGGCTGGGGCA--TG-T-GT-T-G-A-------TCATC-GAAAAACAT-GACT
131 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
** * ** * * * ****
16624745 G-GCGA-CGTTGGGGTTCC-GA-CGATCGGC----GGG--CCAGCG---GGGGTGTG-C-GCACA
196 GAGC-ATCGCCGGAGAACCTGACCG-GCGGCATTGGGGTTCCGGCGATCGGGG-GGGCCGGGGGG
* * * * ** *
16624795 TGATGTG-AGATG-GGTGC--T-GGTGCTTGGCCCTTATATTGGCCC-CCTA-T--CCCTC-ATC
258 TG-TGCGCACATGATGTGCGATGGGTGC-TGG----TA-CTTGGCCCTTATATTGGCCCCCTATC
*** * * * * * *** * * * *
16624850 AAAACCTCGAGAA-CTC-ACACCCCCTTAAAGAGCATT--TGAG-ATTTTACAGTTTT----G--
316 -CCTCATC-A-AACCTCGAGA---ACTCACACCCCCTTAAAGAGCATTTGAGA-TTTTACAGGTT
* * *
16624904 --CTACAAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAGAAAATCTTG
374 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * * * *
16624967 TACACTTTGAGTTTTGAGCTAAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACATCTAC
439 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* ** * * **
16625032 TAAGTTCAGGGCCAAAACTCCTTCCGAAAAAATTTTTAAAAATCTCGAACCGCAAAAAGTTTTGA
504 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACC-TAAAAAGTTTCAA
* ** * * * *
16625097 AATTTGTGAAAAATATAAAA-GAAGTCATCTTGCCATGAAACTTCATGTGAAGGCTTAAAGGACC
568 AAATCATGAAAAATAGAAAACG-AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* *
16625161 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAAGTAGAAATATGAAGATGTGCCTAAAC
632 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
** *
16625226 CCACCTACCACATTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTACCCGTC
697 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG--
** * * * * * **
16625291 CCCCTGCCCATTTGTTTCATTGGTTGGCTTAGGCATACAGAGTTTATTCCCAGTCTAAGATCAAA
760 --CCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * * * * * * * * ****
16625356 TCAGACTGAGGGTTGCGACAGCAAGATC-AGTAGTACACAGAAGGGGACCCGACCGATCCTTAAC
823 CCGGACCGAGGGTTGCGGCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGA-CGATCCCCGGC
16625420 TTGCGCAT
886 TTGCGCAT
* ** * * * *
16625428 CCCACCCCTCTTGG-CAACTGAACGCCAGCACGCTCGTTTCATGGGTTGAATTAGGCATACGGAG
1 CCCGCCCCTC-TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAG
* *** * *
16625492 TTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATTTAATCAGACCGAGGGTTGC
65 TTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC
* * ** *
16625557 GGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGTCGTATTTTTCTTCACCGAGGCACCATCGCC
130 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
16625622 GGAGCATCG
195 GGAGCATCG
16625631 AGGGGGTCGG
Statistics
Matches: 28709, Mismatches: 5408, Indels: 4490
0.74 0.14 0.12
Matches are distributed among these distances:
835 13 0.00
836 9 0.00
837 2 0.00
838 2 0.00
839 18 0.00
840 7 0.00
841 20 0.00
842 16 0.00
843 182 0.01
844 27 0.00
845 144 0.01
846 24 0.00
847 16 0.00
848 17 0.00
849 18 0.00
850 27 0.00
851 36 0.00
852 23 0.00
853 26 0.00
854 11 0.00
855 8 0.00
856 12 0.00
857 505 0.02
858 67 0.00
859 60 0.00
860 416 0.01
861 127 0.00
862 288 0.01
863 526 0.02
864 302 0.01
865 460 0.02
866 31 0.00
867 26 0.00
868 96 0.00
869 170 0.01
870 312 0.01
871 931 0.03
872 304 0.01
873 696 0.02
874 415 0.01
875 614 0.02
876 235 0.01
877 204 0.01
878 70 0.00
879 255 0.01
880 31 0.00
881 406 0.01
882 966 0.03
883 260 0.01
884 216 0.01
885 144 0.01
886 35 0.00
887 47 0.00
888 355 0.01
889 321 0.01
890 357 0.01
891 2018 0.07
892 884 0.03
893 239 0.01
894 330 0.01
895 1084 0.04
896 870 0.03
897 347 0.01
898 183 0.01
899 444 0.02
900 1719 0.06
901 525 0.02
902 1056 0.04
903 2273 0.08
904 449 0.02
905 621 0.02
906 393 0.01
907 285 0.01
908 110 0.00
909 47 0.00
910 17 0.00
911 47 0.00
912 251 0.01
913 114 0.00
914 315 0.01
915 70 0.00
916 21 0.00
917 22 0.00
918 30 0.00
919 50 0.00
920 35 0.00
921 43 0.00
922 17 0.00
923 19 0.00
924 37 0.00
925 23 0.00
926 8 0.00
927 43 0.00
928 26 0.00
929 34 0.00
930 34 0.00
931 31 0.00
932 16 0.00
933 21 0.00
934 6 0.00
935 17 0.00
936 24 0.00
937 19 0.00
938 13 0.00
939 25 0.00
940 7 0.00
941 7 0.00
942 10 0.00
943 7 0.00
944 12 0.00
945 4 0.00
946 6 0.00
947 8 0.00
948 12 0.00
949 5 0.00
950 8 0.00
951 6 0.00
952 2 0.00
953 8 0.00
954 16 0.00
955 11 0.00
956 14 0.00
957 23 0.00
958 12 0.00
959 10 0.00
960 12 0.00
961 15 0.00
962 12 0.00
963 13 0.00
964 12 0.00
965 7 0.00
966 16 0.00
967 18 0.00
968 22 0.00
969 6 0.00
970 14 0.00
971 17 0.00
972 30 0.00
973 22 0.00
974 21 0.00
975 21 0.00
976 16 0.00
977 8 0.00
978 21 0.00
979 19 0.00
980 18 0.00
981 25 0.00
982 20 0.00
983 16 0.00
984 42 0.00
985 38 0.00
986 36 0.00
987 30 0.00
988 45 0.00
989 33 0.00
990 19 0.00
991 12 0.00
992 18 0.00
993 29 0.00
994 15 0.00
995 38 0.00
996 43 0.00
997 31 0.00
998 49 0.00
999 34 0.00
1000 26 0.00
1001 34 0.00
1002 25 0.00
1003 27 0.00
1004 19 0.00
1005 29 0.00
1006 34 0.00
1007 34 0.00
1008 38 0.00
1009 40 0.00
1010 33 0.00
1011 36 0.00
1012 49 0.00
1013 54 0.00
1014 35 0.00
1015 233 0.01
1016 28 0.00
1017 31 0.00
1018 21 0.00
1019 45 0.00
1020 33 0.00
1021 35 0.00
1022 31 0.00
1023 42 0.00
1024 672 0.02
1025 637 0.02
1026 792 0.03
1027 475 0.02
1028 471 0.02
1029 454 0.02
1030 691 0.02
1031 617 0.02
1032 490 0.02
1033 382 0.01
1034 536 0.02
1035 415 0.01
1036 517 0.02
1037 663 0.02
1038 517 0.02
1039 352 0.01
1040 339 0.01
1041 374 0.01
1042 381 0.01
1043 311 0.01
1044 410 0.01
1045 254 0.01
1046 211 0.01
1047 266 0.01
1048 582 0.02
1049 487 0.02
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (893 bp):
CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCG
GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCG
GAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGT
GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
CTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCTAAAAAGTTTCAAAAATCATGAAAAATAGAA
AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCGCTCGTTTCGTCGG
TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
GGATCGACAGCACGCAGAGGGGGACCCGACGATCCCCGGCTTGCGCAT
Found at i:16595757 original size:26 final size:26
Alignment explanation
Indices: 16595728--16595780 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16595718 TTTGACTTAG
*
16595728 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16595754 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16595780 G
1 G
16595781 ATCGGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16596665 original size:26 final size:26
Alignment explanation
Indices: 16596629--16596681 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16596619 GTTTACTTAG
*
16596629 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16596655 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16596681 G
1 G
16596682 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16600216 original size:26 final size:26
Alignment explanation
Indices: 16600187--16600239 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16600177 GTTGGCTTAG
16600187 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16600213 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16600239 G
1 G
16600240 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16603793 original size:26 final size:26
Alignment explanation
Indices: 16603763--16603815 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16603753 GTTGACTTAG
* *
16603763 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATATGGAGTTCATTCCCAGACTAA
16603789 GCATATGGAGTTCATTCCCAGACTAA
1 GCATATGGAGTTCATTCCCAGACTAA
16603815 G
1 G
16603816 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGACTAA
Found at i:16607213 original size:26 final size:26
Alignment explanation
Indices: 16607184--16607236 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16607174 GTTGACTTAG
16607184 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16607210 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16607236 G
1 G
16607237 ATCGGACTAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16607733 original size:901 final size:898
Alignment explanation
Indices: 16605425--16609735 Score: 5355
Period size: 890 Copynumber: 4.8 Consensus size: 898
16605415 TGGCTTAGGT
* * * **
16605425 ATACGCAGTTGATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGTGGCAGCACATGCTGGGCT
1 ATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTACGGCAGCACATGCTGGGCT
* * *
16605490 CGGGCATTTGCTGGTGCTA-TATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGGAGAA
66 CGGGCATGTGCTGGTG-TAGCATTTTTCTTCGTCGGGGCACCATCGCCA-AGCATCGCCGGAGAA
*
16605554 CTTGACCGACGGCATTGGGGTTCCGACGAT--------CGGGGGGTGTGCGCACATGATGTGCGA
129 CCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
* * * * *
16605611 TGGGTGCTGGTACTTGGCTCTTCTATTGGCCCCCTATCCCTCATCAAATCTCAAGAACTCATACC
194 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAAACC
* * *
16605676 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTATTTAAAATGGG
259 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-GAATGGG
* * * *
16605741 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAACTTTTTAGCTGAATTGTTTTGTAC
323 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
*
16605806 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTT-TCGAAAAAAT
388 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-GAAAAAAT
* ** ** *
16605870 TTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATTGTGAAAAATAGAAAATGAGTCGTCTTGC
452 TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
*
16605935 CATGAAACTTCACCTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
517 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * * *
16606000 GGCATGCAGAAATATTAAGATGTGCCTAAGCCCACCTACCACCCTATCGATCCACGGCTTGCGCA
582 GGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* ** * * ** * *
16606065 TCCCATCTCTCTGATCGGCTTAGTGCCCGCCCGCCCCTCCCGCCTACTTGTTTCGTTGGTTGGCT
647 TCCCGTCTCTCTGGCCGGCGTAGTGCCC-CCCG-CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * ** *
16606130 TAGGCATACGCAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTT----------A-CGG
710 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGACCGAGAGTTGCGGAACAGGATCGG
* * ** *
16606184 CA-CAC--AGAGAGGG-CCCGGTCGATCCCCGGCTTGCGTATCTTG-CCCTCTAGCTGACTGAGC
775 CAGCACATAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTAGCCGACTGAGC
* ** *
16606244 ACCACCGCATACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCGTT-CCAGTCCTAAGC
840 -GC-CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT-CTAAGC
* * * * * *
16606305 ATACAGAGTTCATATCCCAGTGTAAGATTGGACTGGACCAAGGGTTACGACAGCACAAATGCTGG
1 ATACGGAGTTCAT-TCCCAGTCTAAGATCGGACTAGACCGAGGGTTACGGCAGCAC--ATGCTGG
* * ** * **
16606370 GCTC-GGCATGTGTTGGTGCT-GCCTTTTTC-TCAACCCGAGGCACCATCGCCAGAGCATCGTGG
63 GCTCGGGCATGTGCTGGTG-TAGCATTTTTCTTC--GTCGGGGCACCATCGCCA-AGCATCGCCG
* * *
16606432 GAGAACCTGACCGGCAGGCATTGGGGTTCCGGCCGATCGGGAGGGCC-GGGGGTGTGTGCACATA
124 GAGAACCTGACCGAC-GGCATTGGGGTTCC-GACGATCGGG-GGGCCGGGGGGTGTGCGCACAT-
* *
16606496 GAATGTGCGATGGGTGCTGGT-CTTGGCCCTTATA-TGGTCCCCTATCCCTCATCAAAATCCTCA
185 G-ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC-AAA-CCTCG
* * * *
16606559 AGAACTC-ACCCCCCTTAAAGATCATTTGAGATTTTACAGGTTTGCTGCCCGTAGACATTAAAGT
247 AGAACTCAAACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* *
16606623 GTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGA
312 GTCTG-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
16606688 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
376 ATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
** * * *
16606753 TCCAAAAAAATTTTAAAAAATCCCAAACC-AAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
441 TCTGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
16606817 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
506 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
*
16606882 AAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCA
571 AAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * *
16606947 CGACTTACGCATCCCGTCTCTCTGGCCGGCATAGTGCCCACCCGTCCGCCCGCCCGCTCGTTTTG
636 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-CCCGCCCGCCCGCCCGCTCGTTTCG
*
16607012 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGA-TCAGACCGAGAGTTGCGG
700 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT-AGACCGAGAGTTGCGG
* * * * *
16607076 CAACAGGATCGGTAGCACATAGAGGGGGACTCGGTCAAATCCTCGGCTTGCGCATCTCGCCCCTC
764 -AACAGGATCGGCAGCACATAGAGGGGGACCCGGTC-GATCCCCGGCTTGCGCATCCCGCCCCTC
*
16607141 TAGCCGACTGAGCGCCCGTACGCTCGTTTCGT-GGTTGACTTAGGCATACGGAGTTCATTCCCAG
827 TAGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
16607205 TCTAAGC
892 TCTAAGC
* * * * *
16607212 ATACGGAGTTCATTCTCAGTCTAAGATCGGACTAGACTGAGGGTTACAGCAGCTCATGCTGGTCT
1 ATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTACGGCAGCACATGCTGGGCT
* * * * *
16607277 CAGGCATGTGCTGGTGTAGTATTTTTCTTCG-CTGGGGCTCCA-CCCCGAAGCATCACCGGAGAA
66 CGGGCATGTGCTGGTGTAGCATTTTTCTTCGTC-GGGGCACCATCGCC-AAGCATCGCCGGAGAA
* * * *
16607340 CCTGGCCGACGGCATTTGGGTTCCGATGATCGACGGGGCCGGGGGGTGTGCGCACATGATGTGCG
129 CCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* *
16607405 ATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCTCGAGAACTCAAAC
193 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAAAC
*
16607470 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGAGTCTGAATGGG
258 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAATGGG
* * *
16607535 GACACTTTTTTCAAATGGTCACAAAATCTTGTACAATTCAAGTTTTTAGTTGAATTTTTTTGTGC
323 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * * * * *
16607600 ATGCCAAAAAAAATACAAGGATTATGGCTACCAAGTTTGGGGCCAAAAATCGTTCTGAAAAAATT
388 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATT
* **
16607665 TTTAAAAATCCCGAACAACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
453 TTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
* * *
16607730 ATGAAACTTCACGGGAAGGCTTCAGGGACCATTGTATGAATTTATAAGCCATAAAAATGGCATTG
518 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * * * * *
16607795 GCAGGCAGATATATGAAGATGTGCCAAAACCCACCTACCACCCTATCAATCAACGGCTTGCGCAT
583 GCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
* *** * * *
16607860 CCCGTCTCTCTGGCCGACGTAGT-------G--C-CCTAACCGCTCATTTCATCGATTGGCTTAG
648 CCCGTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * *
16607915 GCATACGGAGTTCATTCGCAGTCTAAGATCAAACTAGATC-AAAGGTTG-TGACAGCAGGATCGG
713 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGACCGAGA-GTTGCGGA-A-CAGGATCGG
** ** * * *
16607978 CAGCACGCAGAGGGGGACCCGACCGATCCCCGG-TTGGCTCATCCCGCCCCTCTGGCCGGCTGAG
775 CAGCACATAGAGGGGGACCCGGTCGATCCCCGGCTT-GCGCATCCCGCCCCTCTAGCCGACTGAG
* ** * *
16608042 CGTCCGCACGCTTATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAGGC
839 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * *
16608102 ATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT-GGGCAGCACATGCTGGGCT
1 ATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTACGGCAGCACATGCTGGGCT
** * **
16608166 CGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAAC
66 CGGGCATGTGCTGGTGTAGCATTTTTCTTCGTCGGGGCACCATCG-CCAAGCATCGCCGGAGAAC
* * *
16608231 CTGACCGACGGCATTAGGGTTCCGACGATCGGGGGGCCGGGGGGTGTACGCACATGATGTGAGAT
130 CTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGAT
* * *
16608296 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTTGAGAACTCACACCC
195 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAAACCC
* * *
16608361 CCGTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTAAAATGGGG
260 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-GAATGGGG
* *
16608426 ACACTTTTTTCAAATGGTCACAAAATCTTGTTCCCTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
324 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* **
16608491 TGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGGAAAAACTCCTT-TCGAAAAAATT
389 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-GAAAAAATT
* * * **
16608555 TTAACAAACCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTG-C
453 TTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
*
16608619 ATAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTACGAATTTACAAGCCATAAAAATGGCATT
518 AT-GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* *
16608684 GGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCA
582 GGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * * * *
16608749 TCCCGTCTCTCTGGTCGACGTAGTGCCCGACCGCCTGGCCAC-CCGCAAGCACGTTTCATCGGTT
647 TCCCGTCTCTCTGGCCGGCGTAGTGCCC-CCCGCC-CGCC-CGCC-C--GCTCGTTTCGTCGGTT
* * * * * *
16608813 GGCTTAGGCATACGGAGTTCATTCCTAGCCTAAGATTAGACTAGACCGAGGGTTACGGAAGTAGG
706 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGACCGAGAGTTGCGGAA-CAGG
* * * * *** * ** *
16608878 ATCAGCAACAAATAGAGGGGGACCCGATCGATCTTTGGCTTGCGCATCCCGCCCCTCTGGATGGC
770 ATCGGCAGCACATAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTAGCCGAC
* * *
16608943 TGAGCGCCCGCACGCTCTTTTCATGGGTTGACTTAGGCATACGGAGTTCATTACCAGTCTAAGC
835 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* *
16609007 ATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGATCGAGGGTTGCGGCAGCACATGCTGGGCT
1 ATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTACGGCAGCACATGCTGGGCT
* * * * *
16609072 TGGGCATATGCTGGTGTCGCATTTTTCTTCGTCAGGG-----T-----ACCATCGCCGGAGAACC
66 CGGGCATGTGCTGGTGTAGCATTTTTCTTCGTCGGGGCACCATCGCCAAGCATCGCCGGAGAACC
* * * *
16609127 CGACCGGCGGCATTGGTGTTCC-AGCGATCGGGGGGCTGGGGGGTGTGCGCACATGATGTGCGAT
131 TGACCGACGGCATTGGGGTTCCGA-CGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGAT
* *
16609191 GGGTGCTGGTACTTGGCCCTTATATTGGCCGCCTATCCCTCATCAAACCTCGAGAACTCACACCC
195 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAAACCC
* *
16609256 CCTTAAAGAGCATTTGAGATTTTACAGGATTGCTTCCAGTAGCCATTAAAGTGTCTGAAATGGGG
260 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG-AATGGGG
*** *
16609321 ACACTTTTGAGAAATGGTCAC-AAATCTTGTACACTTCGAGGTTTTAGCTGAATTTTTTTGTGCA
324 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
*
16609385 TGCCAACAAAAATACAAGGATCACGTCTACCAAGCTTGGGGCCAAAACTCCTTCTGAAAAAATTT
389 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTT
* * * * * *
16609450 TAAAAAATCTCGAACTGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCATCTTGCCA
454 TAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
* * *
16609515 TGAAACTTCACGTGAAGGTTTAAGGGACCGTTGTATGAATTTACAATCCATAAAAATGGCATTGG
519 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
* * *
16609580 CACTTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACACAT-
584 CACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * * * *
16609644 CTGATCTTTTTGGCCGGCGTAGTG---CCCGCCCGCCCGCCCGCTCATTTTGTCAGTTGGCTTAT
649 CCG-TCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
16609706 GCATACGGAGTTCATTCCCAGTCTAAGATC
713 GCATACGGAGTTCATTCCCAGTCTAAGATC
16609736 GGACGGAACT
Statistics
Matches: 2975, Mismatches: 364, Indels: 178
0.85 0.10 0.05
Matches are distributed among these distances:
880 10 0.00
881 38 0.01
882 20 0.01
883 47 0.02
884 14 0.00
885 5 0.00
886 44 0.01
888 5 0.00
889 253 0.09
890 529 0.18
891 3 0.00
892 67 0.02
893 227 0.08
894 499 0.17
895 244 0.08
898 1 0.00
900 167 0.06
901 269 0.09
902 49 0.02
903 26 0.01
904 23 0.01
905 233 0.08
906 90 0.03
907 51 0.02
908 25 0.01
909 19 0.01
910 17 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (898 bp):
ATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTACGGCAGCACATGCTGGGCT
CGGGCATGTGCTGGTGTAGCATTTTTCTTCGTCGGGGCACCATCGCCAAGCATCGCCGGAGAACC
TGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATG
GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAAACCCC
CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAATGGGGAC
ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTA
AAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
CGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
GTCTCTCTGGCCGGCGTAGTGCCCCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
TACGGAGTTCATTCCCAGTCTAAGATCAGACTAGACCGAGAGTTGCGGAACAGGATCGGCAGCAC
ATAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTAGCCGACTGAGCGCCCGC
ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
Found at i:16608109 original size:26 final size:26
Alignment explanation
Indices: 16608071--16608124 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
16608061 TGGGTTGACT
16608071 TAGGCATACGGAGTTCATTCCCAATC
1 TAGGCATACGGAGTTCATTCCCAATC
* *
16608097 TAGGCATATGGAGTTCATTCCCAGTC
1 TAGGCATACGGAGTTCATTCCCAATC
16608123 TA
1 TA
16608125 AGATCAGACC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.24, G:0.20, T:0.30
Consensus pattern (26 bp):
TAGGCATACGGAGTTCATTCCCAATC
Found at i:16609009 original size:26 final size:26
Alignment explanation
Indices: 16608979--16609031 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16608969 GTTGACTTAG
16608979 GCATACGGAGTTCATTACCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
*
16609005 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
16609031 G
1 G
16609032 ATCGGACTAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTACCAGTCTAA
Found at i:16610586 original size:26 final size:26
Alignment explanation
Indices: 16610550--16610602 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16610540 GTTGACTTAG
*
16610550 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16610576 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16610602 G
1 G
16610603 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16613234 original size:26 final size:26
Alignment explanation
Indices: 16613205--16613257 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16613195 GTTGACTTAG
16613205 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16613231 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16613257 G
1 G
16613258 ATCGGACTAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16614134 original size:26 final size:26
Alignment explanation
Indices: 16614105--16614157 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
16614095 GTTGATTGAG
*
16614105 GCATACA-AGGTTTATTCCCAGTCTAA
1 GCATACAGA-GTTCATTCCCAGTCTAA
*
16614131 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16614157 G
1 G
16614158 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16615012 original size:26 final size:26
Alignment explanation
Indices: 16614976--16615028 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16614966 GTTGACTTAG
16614976 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16615002 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16615028 G
1 G
16615029 ATCGGATTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16615566 original size:871 final size:874
Alignment explanation
Indices: 16609831--16624725 Score: 15912
Period size: 891 Copynumber: 16.9 Consensus size: 874
16609821 GGGTTCCAGT
* * * *
16609831 GATCGGGGGGGCCAGGGGGTGTGCGCACATGATGTGCGGTGGGTGCTGGTACTTTGCCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* * *
16609896 TGGCCCCCTATCCTTCATCAAACCACGAGAACTCACACCCCCTTAAAGAGCGTTTGAGATTTTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* *
16609961 AGGTTTGCTGCCAGTAGCCATTAAAGTATTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * ** * *
16610026 TCTTGTACACTTCGAGTTTTTAGCTGAATTCTTTTGTCCACACCAACAAAAGTACAAGGATCACG
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
* * *
16610091 TCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTGTAAAAAATCCCGAACCGTAAAAAGT
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
* * * * * *
16610156 TTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGACATGAAACTTCGCGTGAAGTCTTAAGG
326 TTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
*
16610221 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTGCCA
391 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC-
* * *
16610286 AAACCCACCTACCACCCCATCGATCCACGGCTTGCGCATCCCGTCTTTCTAGCCGGTGTGGTGCC
455 TAA---A--T-CCA--CCAT--A-CCAC--C---CG--T--C-TC--TCTAGCCGGCGTAGTGCC
* * *
16610351 CGCCCGCCCGCCCGCTCGTTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGCCTT
497 CGCCCGCCCGCCCG--C--TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * * * *
16610416 AGATCAGACCAGAGTGAGGGTTACGGTAGTAGGATCAGCAGCATGCAGAGGGGGACCCGACCGAT
558 AGATCAGACCA-AGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGAT
* *
16610481 CCTCGGCTTGCGCATCCTGCCCCTCTGGCCGGTTGAGCACCCGCACGCTCGTTTCGTGGGTTGAC
622 CCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGAC
*
16610546 TTAGGCATACGGAGTTCATTCTCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
687 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* *
16610611 GGACTCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTTGT
752 AGAC-CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGT
* * *
16610676 CGGGGCACCA---TC---G--T---CGGAGAACCTGACCGACGGCATTGGAGTTTCGGC
816 CGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTCGAC
* *
16610724 GATCG-GGGGGCCGGGGGGTGTGTGCACATGATGTACGATGGGTGCTGGTACTTGGCCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
*
16610788 TGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
16610853 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTCAAATGGTCACAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * * * * * *
16610917 TCTTGTATACTTCAAGTTTTTAGCTAAATTTTTTTATACGTGCCAACAAAAATACAAGGATCACA
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
* * * *
16610982 TCTACAAAGTTTGGGGCCAAAACTCCTTTCAAAAAAATTTTAAAAAATCCCG-ACTCGTAAAAAG
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAAC-CGCAAAAAG
*
16611046 TTTCAAAAATCGTGAGAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* * *
16611111 GGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCTGAAATATGAAGATGTGCC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * *
16611176 TAAACCCACGTACCACCCTATCGATCCATGGCTTGCGCATCCCGTTTCTCTGGCCGGCGCAGTGC
455 T-AA---A--T-CCA--C---C-AT--A-------C-CA-CCCGTCTCTCTAGCCGGCGTAGT--
* *
16611241 CCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCT
494 --GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
** * * * *
16611306 AAGATTGGACCAGACCGAGGGTTGCGGCAGC---AT---------GTAGAGGGGCACCCGACCGA
557 AAGATCAGACCA-AGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGA
** * * *
16611359 TCCCTAGCTTGTGCATCCCGCCCCTCTAGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGA
621 TCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGA
* * * ** *
16611424 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCACACGAAATTCATTCCCAGTCTAA-ATTAGAT
686 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
* * * * *
16611488 CAGAGCGAGGGTTGCGGTAGCACATGCTAGGCTCGGGCATGTGTTGGTGCTGCATTTCTCTTCGT
751 CAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGT
* * * * *
16611553 CGGGGCACCATCGTCGGTGCATCGCCGGAGAACTTGACCGACGGCATTGGGG-TTCTGAT
816 CGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTC-GAC
* * *
16611612 GATCGAGGGGGCCGGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTTCTTAGCCCTTATA
1 GATCGAGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
16611677 TTGGCCCCCTATCCGTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
65 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
16611742 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCATATGGTCACAAA
130 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * *
16611807 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCAAAAAAAAATACAAGGATCAT
195 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCAC
* * * * * **
16611872 ATCTACCAAGTTTGGGACCAAAAATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCATAAAAAG
260 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
* * * * *
16611937 TTTTAAAAATCGTGAAAAATAAAAAATGAGTCATCTTGCGATGAAACTTCATGTGAAGGCTTAAG
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
*
16612002 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTGCC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * *
16612067 AAAACCCACCTACCACCCCATCGATCCACGGCTTGCGCATCCCGTCTTTCTAGCCGGTGTGGTGC
455 -TAA---A--T-CCA--CCAT--A-CCAC--C---CG--T--C-TC--TCTAGCCGGCGTAGTGC
* * * *
16612132 CCACCCGCCCGCCCGCTCGTTCGTTTTGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGCCT
496 CCGCCCGCCCGCCCG--C--TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * * * * *
16612197 TAGATTAGACCAGAGTGAGGGTTACGGTAGTAGGATCAGCAGCATGCAGAGGGGGACCCGACCGA
557 AAGATCAGACCA-AGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGA
* *
16612262 TCCTCGGCTTGCGCATCCTGCCCCTCTGGCCGGTTGAGCACCCGCACGCTCGTTTCGTGGGTTGA
621 TCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGA
* * * ** *
16612327 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCACACGAAATTCATTCCCAGTCTAA-ATTAGAT
686 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
* * * * *
16612391 CAGAGCGAGGGTTGCGGTAGCACATGCTAGGCTCGGGCATGTGTTGGTGCTGCATTTCTCTTCGT
751 CAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGT
* * * * *
16612456 CGGGGCACCATCGTCGGTGCATCGCCGGAGAACTTGACCGACGGCATTGGGG-TTCTGAT
816 CGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTC-GAC
* * *
16612515 GATCGAGGGGGCCGGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTTCTTAGCCCTTATA
1 GATCGAGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* *
16612580 TTGGCCCCCTATCCGTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTCTA
65 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * *
16612645 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGGCTCAAA
130 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * * *
16612710 ATGTTGTACACTTTGAGTTTTTAGCT-AAATTTTTTGTGCTTGCCAACAAAAATAAAAGGATCAT
195 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCAC
*
16612774 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCACGAACCGCAAAAAG
260 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
* * * * *
16612839 TTTCAAAAATCGTGACATATAGAAAATGAGTTGTCTTGCCTTGAAACTTCACGTGAAGGCCTAAG
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* *
16612904 GGACCATTGTATGAATTTACAAGCCATTAAAATGGTATTGGCATGCAGAAATATGAAGATGTGCC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * * * *
16612969 TAAATCCACC-TACCACCCGTCTCTCTAACCGGCGTAGTGACCGCCCGCCCGTCCGCTCATTCCG
455 TAAATCCACCATACCACCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCG
* *
16613033 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAAGCGAGGGTTGTGGC
520 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CCAAGCGAGGGTTGCGGC
* * * * * * * * *
16613098 AGTAAGATCGGTAGCATGCAGAGAGGGACCCGGTCGATCCTCGGCTCGCGCATCCAGCCCCTCTG
584 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTG
* * * *
16613163 GCTGGCTGAGCACCCGCACGGTCATATCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
649 GCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* *** *
16613228 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGATTAAGGTTTGCGGCAGCACATGCT
714 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCT
* * ** * * * *
16613293 AGGCTCGAGCATGTGTTGGTGCCATATTTTTCTTCATCAGGGCACCATCATCGGAGCATCGCCGG
779 GGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACCGG
* * *
16613358 AGAACCTGACCGGCGGCATTGGGGTTCCGAC
844 AGAACCTGACCGACGACATTGGGGTTTCGAC
* *
16613389 GATCG-GGAGGGCCGGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTA-TTGGCCCCTA
1 GATCGAGG-GGGCC--GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
*
16613452 TATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
63 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* * *
16613517 TACTGGTTTGCTGCCAGTAGCCATTAATGTGT-TCGAAATGGGGACACTTTTTCCAAATGGTCAC
128 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-GAAATGGGGACACTTTTTTCAAATGGTCAC
* * * *
16613581 AAAATGTTGTACACTTCGAGTTTTTAGC-GAAATTATTTTGTGAATGCCAAAAAAAATAAAAGGA
192 AAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTTTTTGTGCATGCCAACAAAAATAAAAGGA
* * * *
16613645 TAACGTCTACCATGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCG-ACTCGTA
256 TCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAAC-CGCA
* *
16613709 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
320 AAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
*
16613774 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCTGAAATATGAAGAT
385 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
*
16613839 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGT
450 GTGCCT-AA---A--T-CCA--C---C-AT--A-------C-CA-CCCGTCTCTCTAGCCGGCGT
* * * *
16613904 AGTGCCCGCCCGCCTGCCCGCTCGTTTCGTCGGTCGGCTTAGGCTTATGGAGTTCATTCCCAGTC
491 AGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * * * * * * **
16613969 TTAGATCAGACCAGAGTGAGGGTTACGACAGTAGGATCTGTAGCACGCAGAGGGGGAACCGATCG
556 TAAGATCAGACCA-AGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCG
** * *
16614034 ATCCCCGGCTTGCGCATCCTGCCCCTCTTTCCGGCTGAGCACCCGTACGCTCGTTTCATGGGTTG
620 ATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTG
* *
16614099 A-TTGAGGCATAC-AAGGTTTATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
685 ACTT-AGGCATACGGA-GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
* * ** * *
16614162 GACCGGACTGAGGGTTGCGGCAGCACATGCTGGGCTCCAGCGTGTGTTGGTGCCGTATTTTTCTT
748 GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
* *
16614227 CGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGA-ATTGGGGTTCCGAC
813 CGTCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGAC-GACATTGGGGTTTCGAC
*
16614289 GATCG-GGGGGCC-GGGGGTGTGCGCACATGATGTGCGAGGGGTGCTGGTACTTGGCCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* *
16614352 TGGCCCCCTATCTCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTCTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* * *
16614417 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGGCTCAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * * *
16614482 TGTTGTACACTTTGAGTTTTTAGCT-AAATTTTTTGTGCTTGCCAACAAAAATAAAAGGATCATG
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
*
16614546 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCACGAACCGCAAAAAGT
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
* * * * *
16614611 TTCAAAAATCGTGACATATAGAAAATGAGTTGTCTTGCCTTGAAACTTCACGTGAAGGCCTAAGG
326 TTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* *
16614676 GACCATTGTATGAATTTACAAGCCATTAAAATGGTATTGGCATGCAGAAATATGAAGATGTGCCT
391 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
* * * *
16614741 AAATCCACC-TACCACCCGTCTCTCTAACCGGCGTAGTGCCCGCCCGCCCGTCCGCTCATTCCGT
456 AAATCCACCATACCACCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGT
* *
16614805 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAAGCGAGGGTTGTGGCA
521 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CCAAGCGAGGGTTGCGGCA
* * * * * * * * *
16614870 GTAAGATCGGTAGCATGCAGAGAGGGACCCGGTCGATCCTCGGCTCGCGCATCCAGCCCCTCTGG
585 GCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGG
* * *
16614935 CTGGCTGAGCACCCGCACGCTCATATCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
650 CCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
***
16615000 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATTGGACCGAGGGCTTGC-GCAGCACATGCT
715 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGG-TTGCGGCAGCACATGCT
*
16615064 GGGCTCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTC-GGGCACCATCGTCGGAGCATCACCGG
779 GGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACCGG
* * *
16615128 AGAACTTGGCCGACGACATTGAGGTTTCGAC
844 AGAACCTGACCGACGACATTGGGGTTTCGAC
* *
16615159 GATCAAGGGGG-CTGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAC
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA-
* * *
16615223 TAGG-CCCCTGTCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
65 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
16615287 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
130 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* *
16615352 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAA-AAAAAAAAAAGGATCAC
195 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCAC
* ** *
16615416 GTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCAAAACCACAAAAAG
260 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
* * * * *
16615481 TTTCAAAAATCATGAAAAATGGAAAACGAGTCGTCTTGCCATTAAACTTCACGTGAAGACTTAAG
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* *
16615546 GGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCATGCAAAAATATGAAGATGTGCC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * * * * * *
16615611 TAAACCCACC-TACCACCCGTCTCTCCAGTCGGCGTAGTGCCTGCCCGCCTGCCCGCTCGTTCCA
455 TAAATCCACCATACCACCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCG
* * *
16615675 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCGGAGTGAGGGTTTGCGG
520 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC-AAGCGAGGG-TTGCGG
* * * * *
16615740 CAGCA-GATTGGCAGCATGCAAAGGAGGA-CCGGCCGATCCCTGGCTTGCGCATCCTGCCCCTCT
583 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCT
*
16615803 GGCCGGCTGAGCACCCGCACGCTCGTTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGT
648 GGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * *
16615868 CTGAGCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGCAGCACATGT
713 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGC
* * *
16615933 TGGGCTCGGGCATGTGTTGGTGCTGCATTTTTCTTCGCCAGGGCACCATCGTCGGAAGCATCACC
778 TGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGG-AGCATCACC
*
16615998 GGAGAACCTGACTGAC-AGCATTGGGGTTTCGAC
842 GGAGAACCTGACCGACGA-CATTGGGGTTTCGAC
* * *
16616031 GATC-CGGGGGCCGAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACCTGGCCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* *
16616095 TGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* * *
16616160 AGGTTTGCTGCCAGTAGCCACTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGGCTCAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * *
16616225 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCTTGCCAAAAAAAATAAAAAGATCATG
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
* *
16616290 TGTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
* * *
16616355 TTCAAAAATTGTGAAAAATAGAAAATGAGTCGTCTTACCATGAAACTTCACGTGAAGGGTTAAGG
326 TTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
*
16616420 GACCATTGTATGAATTTACAAGCCATAAAAATGGCAGTGGCATGCAGAAATATGAAGATGTGCCT
391 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
* * ** * *
16616485 AAA-CTCACC-TACCACCCGTTTCTCTAGTCGGCGTA-T-------TACCTGCCCGCTCGTTCCG
456 AAATC-CACCATACCACCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCG
* * * * *
16616540 TCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGATCGAGTGAGGGTTGCAGCA
520 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAAGCGAGGGTTGCGGCA
* *
16616605 GCAGGATCGGCAGCATGCAGAGGGGGACCCGGCCGATCCCCGGCTTGTGCAT-CTCGCCCCTCTG
585 GCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCT-GCCCCTCTG
*
16616669 GCCAGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
649 GCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * * * * *
16616734 TAAGCACACAGAATTCATTCCCAGTCTAA-ATCAGACCAGACCGAGGGTTACGGTAGCATATGAT
714 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCT
* ** * *
16616798 GGGCTCGAGCATGTGTTGGTGCCGCATTTTTCTTCACCAGGGCACCATCGCCGGAGCATCACCGG
779 GGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACCGG
* * *
16616863 AGAACCTGATCGACGGCATTGGGGTTTCGAT
844 AGAACCTGACCGACGACATTGGGGTTTCGAC
* * *
16616894 GATCGAGGGGGCCGGGGGGGTGTGCGCACATGATGTGTGATGGGTACTGGTTCTTGGCCCTTATA
1 GATCGAGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* * *
16616959 TTGGCCTCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAATGAGCATTTGAGATTTTA
65 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
16617024 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
130 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
16617089 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCATGCCAAAAAAAATACAAGGATCAC
195 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCAC
* * * *
16617154 GTCTACAAAGTTT-GGGTCAAAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAG
260 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
** *
16617218 TTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTAACGTGAAGGCTTAAG
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
*
16617283 GGACCATTGTATGAATTTACAGGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * *
16617348 TAAACCCACCTACCACCTTATCGATCCATGCTTGCGGATCCCGTCTCTCTGGCCGGTGTAATGCC
455 T-AA---A--T-CCA-C----C-AT--A--C---C--A-CCCGTCTCTCTAGCCGGCGTAGTGCC
** * *
16617413 TACCCGCCCGCCGCCTGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTTA
497 CGCCCGCCCG-C-CC-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * * * *
16617478 GATCAGACCAGACCAAGGGTTACGACAGCAGGATCAGTAGCACGCAGAGGGGAACCCGACTGATC
559 GATCAGACCA-AGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATC
* * * * * * *
16617543 CCTGGCTTGTGCATCCCGCCCTTTTGGCCGACTGAGCACCCGCACGCTTGTTTCGTGGGTTGACT
623 CCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACT
* * * *
16617608 TAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGACCGGATCA
688 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCA
* * * * * *
16617673 AATCGAGGGTTGCGGCAGCACATGCAGGGC-CTGAGCATGTGTTGGTGCCACATTTTTCTTCGTT
753 GACCGAGGGTTGCGGCAGCACATGCTGGGCTC-GGGCATGTGTTGGTGCCGCATTTTTCTTCGTC
* * *
16617737 GGGGCACCATTGTCGGAGCATCGCCGGAGAACCTGACCGACGACATTGGGGTTCCGAC
817 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTCGAC
* *
16617795 GATCG-GGTGAGCCGGGGGGTGTGCGCACATGATGTGCGATAGGTG-TCGGTACTTGGCCCTTAT
1 GATCGAGG-GGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT-GGTACTTGGCCCTTAT
* * *
16617858 ATTGGCCCCCAATCCCTCATCAAACCTCGAGAACTCACATCCCCTTAAAGAGAATTTGAGATTTT
64 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* * *
16617923 ACAGGTTTGCTGCCAGTAGCCATTAATGTGTCTAAAATGGGGACACTTTTCTCAAATGGTCACAA
129 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
*
16617988 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTGTGCACGCCAACAAAAATAAAAGGATC
194 AATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTTGTGCATGCCAACAAAAATAAAAGGATC
* * * *
16618053 ACGTCTACCAAGTTTGGGGTCAAAATTCCTTCCGAAAAAATTTTCAAAAATCCCGAACCACAAAA
258 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAA
* * * * *
16618118 AGTTTCAGAAATCGTGAAAAATAGAAAACGAGCCATCTTGCCATGAAACTTAACGTGAAGGCTTA
323 AGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
** * *
16618183 AGGGACCATTGTACAAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTG
388 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTG
*
16618248 CCTAAACCCACCTACCACCCTATCTATCCACGGCTTGCGCATCCTGTCTCTTTGGCCGGCGTAGT
453 CCT-AA---A--T-CCA-CC-A--TA-CCAC--C---CG--T-C--TCTC--TAGCCGGCGTAGT
* * * *
16618313 ----GCTCGCCCACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAA
494 GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * * *
16618374 GTTCAGACCAGACCGAGGGTTGCGGTAGCAGGATCGATAGCACGCAGAGGGAGACCCGACCTATC
559 GATCAGACCA-AGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATC
* * ** * * *
16618439 CTCGGCTTACGCATCCCACCCCTCTGGTCGACTGAGCACCCGCACGCTCCTTTCGTGGGTTGACT
623 CCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACT
*
16618504 TAGGCATACGGAGTTCATTCCCAG--T---C-TA---AG---ATT----G-----GA-CTG----
688 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCA
**
16618543 GACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGTTGCATTTTTCTTCG-CT
753 GACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTC-
* * *
16618607 GGGGCACCA---TC---G--T---CGGAGAACTTGATCGACGACATTGGGTTTTCGAC
817 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTCGAC
* * *
16618654 AATCGGGGGGGCCGGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
1 GATCGAGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* *
16618719 TTGGCCCTCTATCCCTCATCAATCCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
65 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
16618784 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAA
130 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * *** ** ** ** *
16618849 ATCTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-T--A-G--AA-AAAATTTTT
195 ATCT---TGTA-CAC-T-T--CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA---AT
** * * ** * ** *
16618907 AAAAAAATCCCGAACCGTAAAAAGTTT-----CAAAAAT-CTT--G-AAAAA-TAGAAAACGAGT
249 AAAAGGATCACG--TC-TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA--AAT
* * * * *** ** * * *
16618962 --CG-TCTTGCCATGAAACTTT-----A-CGTGAAGGCT---TCA-GGGAC--CATTG-TATG-A
309 CCCGAAC-CG-CA-AAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTC-TTGCCATGAA
* * * ** ** * ** *
16619010 A-TTTAC---AAGCCATAAAAATGA-CATTG---GAACGTAGAA---ATATGAA--G-ATATGTC
370 ACTTCACGTGAAGGC-T-TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT-TGGC
** ** ** ** * ** * * * * *
16619061 TAAACCCACCTACT--ACCT-T--ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCAT
432 -ATGCAGAAATA-TGAAGATGTGCCTAAATCCAC--CATAC-CA-CCCGTCTCTCTAGCCGGCGT
* *
16619121 AGTGCCCGCCCGTCCGTCCGCCCGCTCGTTTTGTCGGTTGGCTTAGGCATATGGAGTTCATTCCC
491 AGTGCCCGCCCG--C--CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
** * * ** * * * * *
16619186 AGTCTAAGATTGGACCGAACCGAAGGTTGCGGCAATAGGATCAGTAGCACGTAGTGAGGGACCCG
552 AGTCTAAGATCAGACC-AAGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
* *
16619251 GCCGATCCCCGGCTTGCGCATCCTTCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGG
616 GCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGG
16619316 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
681 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* *
16619381 CGGACCAGACCGCGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGTCGCATTTTTC
746 CGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTC
* * * * *
16619446 TTCGTCGAGGCACCA---TC--A-C--CA---AAGAACTTGACC-AGCGATATTGGGGTTTCGGC
811 TTCGTCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGA-CGACATTGGGGTTTCGAC
* * *
16619499 GATCGAAGGGGCCGGGGGG-GTACGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* *
16619563 TGGCCCCCTACCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* *
16619628 AGGTTTGCTGTCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * *
16619693 TCTGGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAGAAAAATACAAGGATCATG
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
* * * * *
16619758 TCTACGAAGTTTCGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCTC-AACCCGTAAAAAG
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAA-CCGCAAAAAG
* * *
16619822 TTTCAAAAATCGTGAGAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAG
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* ** *
16619887 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTGGAAATATGAAGATATGCC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * *
16619952 TAAACCCACCTACCACACTATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCAGACGTAGTGC
455 T-AA---A--T------C---C-A-CCA-----TAC-CA-CCCGTCTCTCTAGCCGGCGTAGTGC
* * ** *
16620017 CTGCCCGCCCACGCGCCCGCTCGTTTCGTCGGTCGGCTTAGGTTTACGGAGTTCATTCCCTGTCT
496 CCGCCCG--C-C-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * * *
16620082 TAGATCAGACCAGAGTGAGGGTTACGGCAACAGGATCAGCAGCACGTAGAGGGGGACCCGACCGA
557 AAGATCAGACCA-AGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGA
* * * *
16620147 TCCCCGGCTTGCGTATCCTGCCCCTCTGGCCGGTTGAGCACCCACACGCTCGTTTCATGGGTTGA
621 TCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGA
* * * *
16620212 CTTAGGCATACGGAGTTCATTCTCAGTCCAAGCATAGGGAGTTCATTCCCAGTCTAAGATCAGAC
686 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
* * * *
16620277 CGGACCGAGGGTTACGGCAGCACATGCTAGGCTCGGGCATGTGTTGGTGCCGTATTTTTCTTCGT
751 CAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGT
* ** *
16620342 CGGGGCACCA---T--G-G-----CCGGAGAACCTGACCGACGGCATTGGATTTTCGGC
816 CGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTCGAC
* * *
16620390 GATCGGGGGGGCCGAGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* *
16620455 TGGCCCCCTACCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
*
16620520 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAAT-GTCACAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * * *
16620584 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCGTACCAACAAAAATACAAGGATCACA
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
* *
16620649 TCTACGAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCC-AACTCGCAAAAAG
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAAC-CGCAAAAAG
* *
16620713 TTTCAAAAATCATGAGAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* * *
16620778 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCTGAAATATAAAGATGTGCC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* *
16620843 TAAACCCACCTACCACCCTATCGATCCATTGCTTGCGCATCCTGTCTCTCTGGCCGACGTAGTGC
455 T-AA---A--T-CCA-CC-AT--A-CCA---------C--CC-GTCTCTCTAGCCGGCGTAGTGC
*
16620908 CCGCCCACCCGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
496 CCG----CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * *
16620973 AAGATCGGACC-GGACTGAGGGTTGCGGTAGCAGGATCGGCAGCATGTAGAGGGGGACCCGGTCG
557 AAGATCAGACCAAG-C-GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCG
* * * * * *
16621037 ATCCTCGGCTTGTGCATCCCGTCCCTCTGGCCGG-T-------TGCACGCTCGTTCCGTGGGTTG
620 ATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTG
* * * * *
16621094 ACTTAGGCATACGGAGTTCATTCTCAATCTAAGCATACGAAATTCATTCCCAGTCTAA-ATCAGA
685 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * *
16621158 CCAGACCGAGGGTTGCGGTAGCATATGCTGGGCTCGAGCATGTGTTGGTGCCGCATTTTTCTTCG
750 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCG
* ** * *
16621223 TCGGGGCACCATCATCGGAGCATTGCCGGAGAACCTGACCGACGACATTGGGG-TTCCAGT
815 TCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTCGA-C
* * * * *
16621283 GATCGAGGGGGCCAGGGGGTGTGCGCACTTGGTGTGCGATGGGTTCTGGTTCTTGGCCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* * *
16621348 GGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACGCCCCCTCAAAGAGCATTTGAGATTTTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
16621413 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* *
16621478 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACG
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
* * * *
16621543 TCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAAAATTTTAAGAAATCCCGAACCACAAAAAGT
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
** *
16621608 TTCAAAAATCGTGAAAAATAGAAAACAAGTCGTCTTGCCACGAAACTTCACGTGAAGGCTTAAGG
326 TTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * *
16621673 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTCGCATGGAGAAATATGAAGATGTGCCA
391 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
* * ** * ** * * *
16621738 AAACCCACC-TACCAACCCATCGATCCACGGCTTGCGCA-TCCCATCTTTCTGGCCGGTGTGGTG
456 AAATCCACCATACC-ACCCGTCTCTCTA--GCCGGCGTAGT-GC--C---C--GCC-------CG
* * * *
16621801 CCCGCCCGCTCGTTTTGTCGGTTAGCTTAGGCATATGGAGTTCATTCCCAGCCTAAGATCAGACC
503 CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC
* * * * * * *
16621866 GAACCGAGGGTTGCGGTAGTAGGATCGGTAGCACGCAGATGGGGACCCGACCGATCCCCGACTTG
568 -AAGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTG
* ** ** * * *
16621931 GGTGTCCCACCCCTCTGGCCGACTGAGCACCCGTACGCTCGTTTCATGGGTTGACTTAGGCATAC
632 CGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
** * * * ** * *
16621996 AAAATTCATTCCTAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATC-GAGCTGGATCGTGG
697 GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGA-CCAGACCGAGG
* * *
16622060 GTTGCAGCAGCACATGCTGGGCTCGGGCATTTGTTGGTGCCGCATTTTTCTTTGTCGGGGCACCA
761 GTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCA
* ** * * *
16622125 TCGTCGAAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGG-TTCTGGC
826 TCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTGGGGTTTC-GAC
* * *
16622174 GATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGTGATTGGTGCTGGTACTTGGCCAC-TATA
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCC-CTTATA
*
16622238 TTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
65 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * * *
16622303 CTGGTTTGTTGCCAGTAGCCATTAATGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
130 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* ** * *
16622368 ATCTTGTACACTTTGAGTTTTTAGCAAAATTTTTTTGTGCATGCCAAAAAAAATATAAGGATCAC
195 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCAC
* ** *
16622433 GTCTACTAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTTGAACCACAAAAAG
260 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
* * * * * *
16622498 TTTAAAAAATCATGAAAAATAGAAAACGAGTTGGCTTGCCATGAAACTTCACGTGAAGGCTTAAA
325 TTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* * * *
16622563 GGACCATTGTATGAATTTACAAGCCATAAAAAGGGC-TTGGGCACGTAGAAATATGAAGATGTTC
390 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT-GGCATGCAGAAATATGAAGATGTGC
*
16622627 CTAAACCCACCTACCACCCCATCGATCCACGGCTTGCGCATCCCGACTCTCTGGCCGGCGTAGT-
454 CT-AA---A--T-CCA--CCAT--A-CCAC--C---CG--T-----CTCTCTAGCCGGCGTAGTG
** * *
16622691 ---GCCCGCCCGCCCATTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCTGTCTAAG
495 CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * ** * * * *
16622753 ATCGGACCGGAA-CAAAGGTTGCGATAGCAGGATTGACAGCACACAGAGGGGGACCCGACCGATC
560 ATCAGACC--AAGCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATC
* *
16622817 CCCGACTTGCGCAT-CTCGCCCCTCTGGCCGGCTGAGCACCTGCACGCTCGTTTCGT-GG--G--
623 CCCGGCTTGCGCATCCT-GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGAC
16622876 -T-----T---GA---C-TT---AG-----GCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
687 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* * * *
16622920 AGACTGAGGGTTGCAGCAGCACATGCTAGGCTGGGGCATGTGTTGGTGCCGCATTTTTCTTCGTC
752 AGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTC
* * *
16622985 TGGGCA-C--CGTC---G--T---CGGAGAACCTGACCTG-CGACATTGGGGTTCCAAC
817 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACC-GACGACATTGGGGTTTCGAC
* * ** * **
16623032 GATCG-GGGGGGCTGGGGGTGCACGCACATGATGTGTGATGGGTGCTGGTACTTCACCCTTATAT
1 GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
16623096 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
66 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
*
16623161 AGGTTTGCTGCCAGTAGCCATTAAAGTGCCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
131 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * * *
16623226 TCTTGTACACATCGAGTTTTTAGCTGAATTTTTTTATGCCTGCCAACAAAAATACAAGGATCATG
196 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
* * * * * **
16623291 TCTAACAAGCTTGGGGCCAAAACTCATTTCGAAAAAATTTAAAAAAATCCCGAACCATAAAAAGT
261 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
* *
16623356 TTCAAAAATCGTGAAAAATAGAAAATGAGTCATCTTGCCATGAAACTTCACATGAAGGCTTAAGG
326 TTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * * *
16623421 GACCATTGTATGAATATACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTTCCT
391 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
* *
16623486 AAACCCACCTACCACCCCATCGATCCATGGCTTACGCATCCCGACTCTCTGGCCGGCGTAGTGCC
456 -AA---A--T-------C--C-A-CCA-----TAC-CA-CCCGTCTCTCTAGCCGGCGTAGTGCC
** * *
16623551 CGCCCGCCCGCCCATTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCTGTGTAAGAT
497 CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
* * * *
16623616 CAGACCAGACCAAGGGTTG-GGACAGCAGGATCGATC-GCACGCAGAGGGGGA-CCGGCCGAGCC
562 CAGACCA-AGCGAGGGTTGCGG-CAGCAGGATCG-GCAGCACGCAGAGGGGGACCCGGCCGATCC
* * * *
16623678 CCGGCTTGCGCATCCCGCCCATTTGGCCGGCTGAGCAACCGCACGCTCGTTTCGT-GG--G---T
624 CCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTT
16623737 -----T---GA---C-TT---AG-----GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG
689 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG
* * * *
16623782 ACTGAGGGTTGCAGCAGCACATGCTGGGCTGGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCTG
754 ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGG
* *
16623847 GGCA-C-T-GTC---G--T---CGGAGAACCTGACCTG-CGGCATTGGGGTTCCGAC
819 GGCACCATCGTCGGAGCATCACCGGAGAACCTGACC-GACGACATTGGGGTTTCGAC
* * * **
16623892 GATCG-GAGGGGCCGGAGTGGGTGCGCGCAGATGATGTGTGATGGGTGCTGGTACTTCACCCTTA
1 GATCGAG-GGGGCCGG-G-GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
16623956 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
63 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
*
16624021 TGCAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
128 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* * *
16624086 AAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATC
193 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATC
* * * **
16624151 ACGTCTAACAAGCTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCATAAAA
258 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAA
* * * * * *
16624216 AGTTTCAAAAATCATAAAAAATAGAAAGTGAGTCATCTTGCCATAAAACTTCACATGAAGGCTTA
323 AGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * * * *
16624281 AGGGACCGTTGTATGAATATACAAGCGATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTG
388 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTG
* * *
16624346 GCTAAACCCACCTACCAACCATCGATCCACGACTTGCGCATCCGGTCTCTCTAGCTGACGTAGTG
453 CCT-AA---A--T-CC-ACCAT--A--C-C-A------C--CC-GTCTCTCTAGCCGGCGTAGTG
* * * *
16624411 CCCGCCTGCCCGCCCGCCCACTCGCCCGTTCATTTCCTTGGTTGGCTTAGGCATACAGAGTTCAT
495 --C-CC-GCCCGCCCG--C-C-CG--C--TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* *** *
16624476 TCCCAATCTAAGATCAGACC-AGACTGAGGGTTGCTATAGCAGGATCAGCAGCACGCAGAGGGGG
548 TCCCAGTCTAAGATCAGACCAAG-C-GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGG
* * * * *** *
16624540 ACCCGGTCGATCCCTGGCTTGCACATCCCGTAACTCTGGCCGGCTGAGCACCCGCACGCTTGTTT
611 ACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTT
* * *
16624605 CGTGGGTTGACTTTGGCATAGGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCT
676 CGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCT
* * * ** *
16624670 AAGATCAGACTAGACCGAGGGCTGCGATAGCACATGCTGGGCTGGGGCATGTGTTG
741 AAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTG
16624726 ATCATCGAAA
Statistics
Matches: 12124, Mismatches: 1343, Indels: 1062
0.83 0.09 0.07
Matches are distributed among these distances:
811 11 0.00
813 4 0.00
815 5 0.00
816 1 0.00
817 1 0.00
818 2 0.00
819 180 0.01
820 1 0.00
821 3 0.00
822 3 0.00
823 2 0.00
824 4 0.00
825 4 0.00
827 1 0.00
828 2 0.00
831 4 0.00
833 3 0.00
834 6 0.00
835 18 0.00
836 15 0.00
837 2 0.00
838 2 0.00
839 18 0.00
840 4 0.00
841 15 0.00
842 13 0.00
843 174 0.01
844 20 0.00
845 113 0.01
846 12 0.00
847 4 0.00
848 3 0.00
849 3 0.00
850 6 0.00
851 1 0.00
852 7 0.00
853 4 0.00
854 7 0.00
855 6 0.00
856 11 0.00
857 441 0.04
858 45 0.00
859 47 0.00
860 408 0.03
861 121 0.01
862 20 0.00
863 506 0.04
864 294 0.02
865 428 0.04
866 30 0.00
867 11 0.00
868 22 0.00
869 102 0.01
870 307 0.03
871 837 0.07
872 305 0.03
873 432 0.04
874 358 0.03
875 309 0.03
876 5 0.00
877 95 0.01
878 11 0.00
879 134 0.01
880 11 0.00
881 8 0.00
882 213 0.02
883 77 0.01
884 11 0.00
885 3 0.00
886 8 0.00
887 34 0.00
888 54 0.00
889 23 0.00
890 240 0.02
891 1971 0.16
892 333 0.03
893 212 0.02
894 253 0.02
895 179 0.01
896 436 0.04
897 160 0.01
898 15 0.00
899 73 0.01
900 702 0.06
901 243 0.02
902 394 0.03
903 493 0.04
904 2 0.00
905 1 0.00
908 1 0.00
910 1 0.00
913 6 0.00
914 1 0.00
915 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (874 bp):
GATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACG
TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
TTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
AAATCCACCATACCACCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGT
CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAAGCGAGGGTTGCGGCAG
CAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGC
CGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
AGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGG
GCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACCGGAG
AACCTGACCGACGACATTGGGGTTTCGAC
Found at i:16615882 original size:26 final size:26
Alignment explanation
Indices: 16615846--16615895 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
16615836 GTTGACTTAG
16615846 GCATACGGAGTTCATTCCCAGTCTGA
1 GCATACGGAGTTCATTCCCAGTCTGA
*
16615872 GCATATGGAGTTCATTCCCAGTCT
1 GCATACGGAGTTCATTCCCAGTCT
16615896 AAGATCGGAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.22, C:0.26, G:0.22, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTGA
Found at i:16617647 original size:26 final size:26
Alignment explanation
Indices: 16617611--16617663 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16617601 GTTGACTTAG
16617611 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
16617637 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16617663 G
1 G
16617664 ACCGGATCAA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16619362 original size:26 final size:26
Alignment explanation
Indices: 16619326--16619378 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16619316 GTTGACTTAG
16619326 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16619352 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16619378 G
1 G
16619379 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16621129 original size:26 final size:26
Alignment explanation
Indices: 16621100--16621151 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
16621090 GTTGACTTAG
* * *
16621100 GCATACGGAGTTCATTCTCAATCTAA
1 GCATACGAAATTCATTCCCAATCTAA
*
16621126 GCATACGAAATTCATTCCCAGTCTAA
1 GCATACGAAATTCATTCCCAATCTAA
16621152 ATCAGACCAG
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.33, C:0.25, G:0.13, T:0.29
Consensus pattern (26 bp):
GCATACGAAATTCATTCCCAATCTAA
Found at i:16622020 original size:26 final size:26
Alignment explanation
Indices: 16621990--16622042 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16621980 GTTGACTTAG
16621990 GCATACAAAATTCATTCCTAGTCTAA
1 GCATACAAAATTCATTCCTAGTCTAA
** *
16622016 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAAAATTCATTCCTAGTCTAA
16622042 G
1 G
16622043 ATCGAGCTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.23, G:0.15, T:0.30
Consensus pattern (26 bp):
GCATACAAAATTCATTCCTAGTCTAA
Found at i:16625512 original size:26 final size:26
Alignment explanation
Indices: 16625482--16625534 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16625472 GTTGAATTAG
*
16625482 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16625508 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16625534 G
1 G
16625535 ATTTAATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:16625826 original size:26 final size:26
Alignment explanation
Indices: 16625796--16625848 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16625786 GTTGACTTAG
16625796 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16625822 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16625848 G
1 G
16625849 ATCGGACTAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16626555 original size:26 final size:26
Alignment explanation
Indices: 16626525--16626577 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16626515 GTTGACTTTG
*
16626525 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16626551 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16626577 G
1 G
16626578 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16627421 original size:26 final size:26
Alignment explanation
Indices: 16627385--16627437 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16627375 GTTGACTTAG
*
16627385 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
*
16627411 GCATACGGAGTTCACTCCCATTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
16627437 G
1 G
16627438 ATCAAACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.28, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCACTCCCAGTCTAA
Found at i:16628130 original size:26 final size:26
Alignment explanation
Indices: 16628094--16628146 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16628084 GTTGACTTAG
*
16628094 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTAATTCCCAGTCTAA
* *
16628120 GCATACGGAGTTAATTCCTAGTCTAA
1 GCATACAGAGTTAATTCCCAGTCTAA
16628146 G
1 G
16628147 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTAATTCCCAGTCTAA
Found at i:16629019 original size:26 final size:26
Alignment explanation
Indices: 16628982--16629034 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16628972 GTTGACTTAG
*
16628982 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16629008 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16629034 G
1 G
16629035 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:16630064 original size:902 final size:890
Alignment explanation
Indices: 16628063--16630315 Score: 3013
Period size: 902 Copynumber: 2.5 Consensus size: 890
16628053 GTGCCCGCTT
* * *
16628063 GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGG
1 GCCCGCACACTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-G
* * *
16628128 AGTTAATTCCTAGTCTAAGATCGGACCAGAACGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
65 AGTTCATTCC-AGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
** * *
16628193 TGTGCTGGTGCCACATTTTTCTTCGTTAGGGCA---C-----CATCGCCGGAGAACCTGACCGGT
129 TGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCTCGTGAGCATCGTCGGAGAACCTGACCGGC
* ** * *
16628250 GGCATTGGGTTTTCCACGATCGGGGTGGCCGGGGGGGTGTGCGCAAATGAT-TGCGATGGGTGCT
194 GGCATTGGG-GTTCCGTGATTGGGG-GGCC-GGGGGGTGTGCG-ACATGATGTGCGATGGGTGCT
*
16628314 GGTACTTGGCCTTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
255 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
*
16628379 GAGCATTTGAGATTTTACAGGTTTGCCGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTT
320 GAGCATTTGAGATTTTACAGGTTTGCCGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* *
16628444 TTTCAAATGGTCACAAAATCTTGTACACTTTGAGCTTTTAGCTGAATTTTTTTGTGCATGCCAAA
385 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
*
16628509 AAAAATACAAGGATCACATCTACCTAGTTCGAGGCCAAAACTCATTCCAAAAAAATTCAAAAAAA
450 AAAAATACAAGGATCACATCTACCAAGTTCGAGGCCAAAACTCATTCCAAAAAAATT-AAAAAAA
* * * * * *
16628574 ATCCCGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATTGAAAAGGAGTCATCTTGTCATGAAAC
514 ATCCCAAACCGCAAAAACTTTCAAAAATCATGAAAAATAGAAAAGGAGTCATCTTGCCATGAAAC
* *
16628639 TTCATGTGAAGGCCTAAGGGACCATTGTATGAATTCGCAAGCCATAAAAATGGCATTGGGATGCA
579 TTCATGTGAAGGCCTAAGGGACCATTGTATGAATTCACAAGCCATAAAAATGGCATTGGCATGCA
* * ** * *
16628704 GAAATATGAAGATGTGGCTAAACCCACCTACCACTCTATCGATCCACGCTTGCGCATCCCACCTT
644 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATAAACGCTTGCACATCCCACCTA
* ** * * * * *
16628769 TCTTGCTGGCGTAGTGCTCGCCCGCCTGCCCGCTCATTTTGTCGGTTGGTTTAGGCATACGGAGT
709 TCTGGCCAGCGTAGTGCTCACCCGCCTGCCCGCCCATTTTATCGGTTGGCTTAGGCATACAGAGT
* * * * *
16628834 TCATTCCCAGTCTAAGATCGAATCAAACCGAGGGTTGTGGTAGCAGGATTGATGGCATGCAGAGG
774 TCATTCCCAGTCTAAGATCGAATCAAACCGAGGGTTGCGGCAGCAGGATCGATGGCACGAAGAGG
* **
16628899 GGGACCCGACCGATCCCCAGCTTGCGCATCTCGCCCCTCTGGCCGGTTGAGC
839 GGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGC
16628951 GCCC-CAGCACTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
1 GCCCGCA-CACTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* ** ** *
16629015 AAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCACACACTGGGCTCGGGC
65 -AGTTCATT-CCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGC
*
16629080 ATTTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCTAGAGCATCGTCGGAGAACCTGAC
128 ATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACC-TCG-T-GAGCATCGTCGGAGAACCTGAC
* * * *
16629145 CGACGACATTAGGGTTCCGGTGATTGGGGGGGCCGGGGGGTGTGCGTGCATGATGTGCGATGGGT
190 CGGCGGCATTGGGGTTCC-GTGATT-GGGGGGCCGGGGGGTGTGCG-ACATGATGTGCGATGGGT
*
16629210 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTT
252 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* * *
16629275 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCTATTAGCCATTAAAGTGTCTGAAATGGGGACAC
317 AAAGAGCATTTGAGATTTTACAGGTTTGCCGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
*
16629340 TTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
382 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* * * * **
16629405 AAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCTAAAACT-ATTTGCAAAAAAATT-TTA
447 AAAAAAAATACAAGGATCACATCTACCAAGTTCGAGGCCAAAACTCA-TTCCAAAAAAATTAAAA
* * *
16629468 AAAATCCCAAACCGTAAAAACTTTCAAAAATCATGAAAAATAGGAAATGAGTCATCTTGCCATGA
511 AAAATCCCAAACCGCAAAAACTTTCAAAAATCATGAAAAATAGAAAAGGAGTCATCTTGCCATGA
* *
16629533 AACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
576 AACTTCATGTGAAGGCCTAAGGGACCATTGTATGAATTCACAAGCCATAAAAATGGCATTGGCAT
*
16629598 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTAAAGGCTTGCACATCCCA
641 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA-TAAACGCTTGCACATCCCA
* * *
16629663 TCTATCTGGCCAGTGTAGTGAC-CACCCGTCTGCCCGCCCACTCGTTTCATCGGTTGGCTTAGGC
705 CCTATCTGGCCAGCGTAGTG-CTCACCCGCCTGCCCGCCCA-T--TTT-ATCGGTTGGCTTAGGC
* *** ** * *
16629727 ATACAGAGTTCATTCCTAGTCTAAGATC-AGATTGGATTGAGGGTTGCGGCAGTAGGATCGGTGG
765 ATACAGAGTTCATTCCCAGTCTAAGATCGA-ATCAAACCGAGGGTTGCGGCAGCAGGATCGATGG
* *
16629791 CACGAAGAGGGGGACCCGACCGATCCCC-GACTTGTGCATCCCGCCCCTCTGGTCGACTGAGC
829 CACGAAGAGGGGGACCCGACCGATCCCCAG-CTTGCGCATCCCGCCCCTCTGGCCGACTGAGC
* * * *
16629853 GCCCGCACTCTCATTTCGTAGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCGTACAG
1 GCCCGCACACTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-G
** * *
16629918 AGTTCATTCTCAGTCTAAGATTAGATCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCCGGCA
65 AGTTCATTC-CAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
** * *
16629983 TGTGCTGGTGCCGTATTTTTTTTCGTCGGGGCACCTTCGTTGGAGCATCGTCGGAGAACCTGATC
129 TGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACC-TCG-T-GAGCATCGTCGGAGAACCTGACC
* *
16630048 GGCGGCATTGGGGTTCCAGTGA-T------CAAGGGGTGTGTGC-ACATGATGTGCGATGGGTGC
191 GGCGGCATTGGGGTTCC-GTGATTGGGGGGC-CGGGGGGTGTGCGACATGATGTGCGATGGGTGC
* *
16630105 TGGTATTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCTCTTAA
254 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
* *
16630170 AGAGCATTTGAGATTTTACAGGTTTGCGGCCAGTAGCCATTAAAGTGTCTGAAATGAGGACACTT
319 AGAGCATTTGAGATTTTACAGGTTTGCCGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * * *
16630235 TTTTCAAATGTTCAGCAAAATCTTGTACACTTTCGAGTTTTTAGGTGAATTGTTTTGTACATGCC
384 TTTTCAAATGGTCA-CAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
*
16630300 AACAAAAATACAAGGA
447 AAAAAAAATACAAGGA
16630316 CCCAGTCGAT
Statistics
Matches: 1200, Mismatches: 133, Indels: 57
0.86 0.10 0.04
Matches are distributed among these distances:
887 3 0.00
888 140 0.12
889 2 0.00
892 1 0.00
893 155 0.13
894 15 0.01
895 56 0.05
897 161 0.13
898 66 0.05
899 285 0.24
900 4 0.00
901 7 0.01
902 302 0.25
903 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.27
Consensus pattern (890 bp):
GCCCGCACACTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGA
GTTCATTCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCATG
TGCTGGTGCCACATTTTTCTTCGTCGGGGCACCTCGTGAGCATCGTCGGAGAACCTGACCGGCGG
CATTGGGGTTCCGTGATTGGGGGGCCGGGGGGTGTGCGACATGATGTGCGATGGGTGCTGGTACT
TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
TTGAGATTTTACAGGTTTGCCGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAAT
ACAAGGATCACATCTACCAAGTTCGAGGCCAAAACTCATTCCAAAAAAATTAAAAAAAATCCCAA
ACCGCAAAAACTTTCAAAAATCATGAAAAATAGAAAAGGAGTCATCTTGCCATGAAACTTCATGT
GAAGGCCTAAGGGACCATTGTATGAATTCACAAGCCATAAAAATGGCATTGGCATGCAGAAATAT
GAAGATGTGCCTAAACCCACCTACCACCCTATCGATAAACGCTTGCACATCCCACCTATCTGGCC
AGCGTAGTGCTCACCCGCCTGCCCGCCCATTTTATCGGTTGGCTTAGGCATACAGAGTTCATTCC
CAGTCTAAGATCGAATCAAACCGAGGGTTGCGGCAGCAGGATCGATGGCACGAAGAGGGGGACCC
GACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGC
Found at i:16632129 original size:866 final size:869
Alignment explanation
Indices: 16630418--16640894 Score: 5281
Period size: 903 Copynumber: 11.8 Consensus size: 869
16630408 ATTCCCAATA
* * * * *
16630418 TAAGCATATGGAGTTCATTCCCAGTGTAAGATTGGATCGGACCGAGGGTTGCGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
* * *
16630483 GGGCTCGGGCATGTGCTGGTGCCGCATATTTCTTCACCGGGGCACCATCGTCGGAGCATCGTCGA
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCA---TC---GC--CG--G-
* * *
16630548 AGAACCTGACCGGCGGCATTGGGGTTCCAGTGATCGGGGGGCCAGGGGGGGTGTGCGCACATGAT
120 AGAACCTGACCGACGACATTGGGGTTCCGGTGATCGGGGGGCCA-GGGGGGTGTGCGCACATGAT
* * *
16630613 GTGCGGTGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACT
184 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
*
16630678 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCA-TAGCCATTAAAGTGTCTGA
249 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
16630742 AATAGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTT
314 AATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * * *
16630807 TTGCGCATGCCAACAAAAATACAAGGATCACGTCTACCATGTTTAGGGCCAAAACTCAATCCGAA
379 TTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCG-A
* ** * *
16630872 AAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAACCGTGAAAAATAGAAAACGAATCA
443 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCA
* * * *
16630937 TCCTGCCATGAAACTTGACGTGAAGGCCTAAGGGACCAATGTATGAATTTACAAGCCATAAAAAT
508 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
16631002 GGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTATCGATCCACGGCTT
573 GGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCA-CGATCCA-GGCTT
* * * * * * *
16631067 ACGCATCCTGTCTATCTGGCCGACGTGGTGACCGCCCGCCCGTCCGCCCGCTCATTTCATCAATT
636 ACGCATCCCGTCT-TCTGGCCGGCGTGGT-ACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGATT
* * ** * *
16631132 GGCTTAGGCATACAGAGTTCATTCTCAGTCTAAGATTGGACC-AGACTAAGGGTTGTGACAGCAG
699 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACTAAGGGTTGCGGCAGCAG
* * * *
16631196 GATCGGCAGCATGCATAGAGGGACTCGACCGATCCCCGACTTGCGCATCTCGCCCCTCTGGCCGA
763 GATCGGCAGCATGCAGAGGGGGAC-CGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGA
* *
16631261 CTGAGCGCCCGTACACTCGTTTCAT-GG-G-T-T-G-A-C-T-
827 CTGAGCACCCGTACGCTCGTTTCATGGGTGATGTAGTACCATC
* *
16631295 TAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGAACCGAGGGTTGCGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
*
16631360 GGGCGCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCGGAGAACCTGACC
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCGGAGAACCTGACC
* * * *
16631425 GACGATATTGGGGTTCCGGTGATCCGTGGGGTCAGGGGGGTGTGCGCACATGATGCGCGATGGGT
131 GACGACATTGGGGTTCCGGTGAT-CGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGT
16631490 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
195 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
*
16631555 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACAC
260 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
16631620 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGCC
325 TTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* *
16631685 AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTGTAAA
390 AAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTTTAAA
* * * *
16631750 AAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCAATGAA
455 AAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAA
* *
16631815 ACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGTATG
520 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
*
16631880 GAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCCAACGATCCATGGCTTACGCATCCCGT
585 GAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCC-ACGATCCA-GGCTTACGCATCCCGT
* * *
16631945 CTTTCTAGCCGGTGTGGTACCCGCCCGCCCGCCCGCTCGCTCGTTTTGTCGATTGGCTTAGGCAT
647 C-TTCTGGCCGGCGTGGTA-CCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGATTGGCTTAGGCAT
* * * * * *
16632010 ATGGAGTTCATTCCCAGCCTAAGATCAGACCGAACCAAGGGTTGCGGTAGTAGGATCGGTAGCAT
710 ACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCAGGATCGGCAGCAT
* * * *
16632075 GTAGAGGGGGATCCGACTGATCCCTGACTTGCGCATCCCACCCCTC-GACCGACTGAGCACCCGT
775 GCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGT
16632139 ACGCTCGTTTCATGGGTTGACTTAGGCATACGAATTCATTCCCAGTC
839 ACGCTCGTTTCATGGG-TGA--T--G--TA-G---T-A---CCA-TC
* * * * *
16632186 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTACAATAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
* * * * *
16632251 AGGCTCGGGCATTTGTTGGTGCCACATTTTTCTTCGTC-GGGC-CCATCGTCGGAGAACCTGACC
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCGGAGAACCTGACC
* * * * * *
16632314 GGCGGCATTGGGGTTCCGGTGATCGAAGGGG-CTGGGGGGTGTGCGTACATGATGTGTGATGGGT
131 GACGACATTGGGGTTCCGGTGATCG-GGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGT
* * *
16632378 GCTGGTACTTGGCCCCTATATTGGCCCCCTATCCCTCATCAAATCTCAAGAACTCACACCCCCTT
195 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* * *
16632443 AAAGAGCATTTGAGATTTTACTGGTTTGCTGCCAGTAGCCATTAATGTGTTTGAAATGGGGACAC
260 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
16632508 TTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAGTTTTTAGC-GAAATTTTTTTGTGCATGC
325 TTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTTTTTGTGCATGC
* * * *
16632572 CAAAAAAAATAAAAGGATAACGTCTACCAAGTTTGGGACCAAAACTGCTTCCG-AAAAATTTTAA
389 CAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTTTAA
*
16632636 AAAATCCCG-ACTCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
454 AAAATCCCGAAC-CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATG
* *
16632700 AAACTTCACGTGAAGGCTTAAGGGGCCATTATATGAATTTACAAGCCATAAAAATGGCATTGGCA
518 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* *
16632765 -GGCTGAAATATGGAGATGTGCCTAAACCCACCT---A--C-C-A-CC---C-T----AT--C-T
583 TGG-AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCACGATCCAGGCTTACGCATCCCGT
* * * * *
16632810 C-TCTGGCTGGCGTAGT---GCCCGCCCGCCCACT---T-GTTTCGTCGGA-CGGCTTAGGCTTA
647 CTTCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTC-GATTGGCTTAGGCATA
* * * * ** *
16632866 CGGAGTTCATTCCCAGTCTTAGATCAGACCGAAGTGAGGGTTACGGCAGCAGGATCCACAGCACG
711 CGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCAGGATCGGCAGCATG
* * ** *
16632931 CAGAGGGGGACCCGA-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGTTGAGCACCCGC
776 CAGAGGGGGA-CCGACT-GATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGT
16632995 ACGCTCGTTTCATGGGTTGATTGGGCATACAAAGTTCATTCCCAGTC
839 ACGCTCGTTTCATGGG-TGA-T--G--T----AG-T-A---CCA-TC
* * * *
16633042 TAAGCATACGGAGTTCATTCCCAATCTAAGATCAGATC-AGACCGAGGGTTGCGGCAGCACATGC
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGA-ACCGAGGGTTGCGACAGCACATGC
* * ** *
16633106 TGGGCTCGAGCATGTGTTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCG
65 TGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGG---CA----C----CATCGCCG
* *
16633171 GAGAACCTGACCGACGGA-ATTGGGGTTCCGGTGATCGGGGGGGCCAAGGGGCTGTGCGCACATG
119 GAGAACCTGACCGAC-GACATTGGGGTTCCGGTGATC-GGGGGGCCAGGGGGGTGTGCGCACATG
*
16633235 ATGTGCGAAGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
182 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
* *
16633300 CTCACACCCCCTTAAGGAGCATTTGAGATTCTACAGGTTTGCTG-CAGTAGCCATTAAAGTGTCT
247 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * *
16633364 GAAATGGGGACACTTTTATCAAATGGGCTCAAAATCTTGTCCACTTCGAGTTTTTAGCTGAATTT
312 GAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* ** * * *
16633429 TTTTGTGCTTGCTGAAAAAAATAAAAGGATCATGTCTACCATGTTTGGGGCCAAAA-TGCCTTCC
377 TTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CCATCC
* * *
16633493 GATAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGT
441 GAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
* * *
16633558 CATTTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTAACAAGCCATTAAA
506 CATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* *
16633623 ATGGTATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCT-------ACG----A--C--
571 ATGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCACGATCCAGGCTT
** * * * *
16633673 -C-CAT--C-TC-TCTAACCGGCGTAGTGCCTGCCCACCCGCCCG-TCCGCTCGTTCCGTCGATT
636 ACGCATCCCGTCTTCTGGCCGGCGTGGTACC-GCCCGCCCGCCCGCT-CGCTCGTTTCGTCGATT
* * * * ** ** *
16633731 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGAGTGAGGGTTGCTTCCAAAAA
699 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGC-GGCAGCAG
* **** ** * * ***** *** * * **** * *** ** ** *
16633796 AATTTTAAAAAATCCTGAACCATAAAAAGT-TTCAAAAATCATGAAAATTAGAAAACGAGTCATC
763 GA-TCGGCAGCATGCAGAGGGGGACCGACTGATCCCCGA-CTTGCGCA-T----CCCG-CCCCTC
* * * * * *** * * * * *
16633860 TTGCC-A-TGAAACTTCCCGTGAAGGCTTAAAGGACCAT-TGT-ATGAATTTACAAGCC
820 TGGCCGACTG-AGC-ACCCGT--ACGC-T--CGTTTCATGGGTGATGTA-GTACCA-TC
* * * ** * * * * ** * * *
16633915 ATAA--AAATGGCA-TTGGCATGCAGAAATATGAAGAT-GTG-CCTAAACCCA--CCTACCAC-C
1 -TAAGCATACGG-AGTT--CATTC-CCAGTCT-AAGATCG-GACC-GAACCGAGGGTTGCGACAG
* * * * * * * *** ** * *
16633972 CTATTGATGCAT-GGCTTGCGCATCTCGTCTCTCTGGTCGGCATAGTGCCCACCGACCCGCCGGC
58 C-A--CATGC-TGGGCTCGGGCA--T-G--T-GCTGGT-GCCACATTTTTCTTC-A-TCG-GGGC
* * * * * * ** * ***
16634036 -CCACTCGTTTCGTCGGTTG-GCTTAGGCATG-CAGA-GTT--CATTCCCAGTCTAAGATCAAAC
109 ACCA-TCG---C--CGG-AGAACCT-GAC-CGAC-GACATTGGGGTT-CC-G-GT--GATC-GGG
* * * * * * * * * * * * ** ****
16634095 TGGACTGAGGGTTGTG-GCAGTAGGAT-TGACAGCACGCAGAG-GGGGACCCGGCCAATCCCCGG
158 GGGCCAGGGGGGTGTGCGCA-CATGATGTG-C-G-ATG-GGTGCTGGTACTTGG-C---CCTTAT
* * * ** * * * * * ** * ** *
16634157 CTTGCGCATCCC-ACCCCTCGGGC-CAGCT-GAGCACCCACACGCCCGTT-TCGTG-GGTTGA-C
214 ATTG-GC-CCCCTATCCCTC-ATCAAACCTCGAGAACTCACAC-CCCCTTAAAGAGCATTTGAGA
* *** * * * *
16634216 TTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTT-CATTCCCAGTCT-AAGAT--CG
275 TT----TTACAG-GTTTGCTGCCAG--T-AGC---C--A-TTAAAGT----GTCTGAA-ATGGGG
**** * * * * * * * ** * *
16634277 A-AC--CAGACCAAGGGTTGCGACAGCACATGCTGGGCT-CGGGCAT-GTGTTGGT-GCCGCATT
321 ACACTTTTTTCAAATGG--GC-ACA--AAAT-CT-TG-TAC--ACTTCGAGTTTTTAGCTGAATT
* **** ** **** ** ** **
16634336 TTTCT-T-C--GCCGGGGCACCATCGCCGGAGT-AC--C-ACC--G---GAGAACC-TGACT-GG
376 TTTTTGTGCATGCC-AAAAAAAATAAAAGGA-TCACGTCTACCAAGTTTG-GGGCCAAAACTCCA
* ****** ***** ** ** * *** * * ****
16634386 T-AGCATTGGGGTTTCGGCGATCGGGGGGCCG-GAGGGGTGGGTGTGCACACAT-GATGTGCCAT
438 TCCG-AAAAAATTTTAAAAAATC-CCGAACCGTAAAAAGT---T-T-CAAAAATCG-TGAAAAAT
**** * * * * * *** * **** *
16634448 -GGGTGCTG-GT-A-CTTGGCCCTTATA-TTGGCCCCCT-ATCCCTCATCAAACC--T-TAAGAA
495 AGAAAAC-GAGTCATCTT-GCCATGAAACTT---CACGTGAAGGCTTAAGGGACCATTGTATGAA
* * * * * * * * * *
16634504 CTCAC-AGCCCCT-TAAA-GAGCATT--C---GAG--ATTTTACAGGTTTG-CT---GCCA-GTA
555 TTTACAAG-CCATAAAAATG-GCATTGGCATGGAGAAATATGA-AGATGTGCCTAAACCCACCTA
*** * * * *** ** * ** * *** ** * * *
16634554 GCCATTAAAG-TGTCTGAAATGGGGA-CACTTTTTTCAAATGGTCACGAAATCTTATACACTTCG
617 -CCACCCACGAT-CCAGGCTTACGCATC-CCGTCTTC---TGG-C-CGGCGTGGTA-CCGC-CCG
***** * * * * * ** *** *
16634617 AGTTTTCAGCT-GAAAT-TTTTTGT-GCA-TGCCAACAAAAATACAGGA--TCACGTCTACCAAG
672 -CCCGCCCGCTCG--CTCGTTTCGTCG-ATTGGC-TTAGGCATAC-GGAGTTCA--T-T-CCCAG
* * *** ** *** ***** * * * * ** ** * * *
16634676 TTTGGGGCAAAAATCCTTCC-AAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
727 --T----CTAAGATCAGACCGAACTAAGGGTTGCGGCA-GCAGGATCGGCAGCA--TGC--AGAG
* ** * ** ** *** * * ** * *
16634740 GGTGA-AAAATAGAAAACGAGTCATCTTGC-CAT---GAAACT-T---C-A-TGTGAAGGCTTAA
781 GGGGACCGACT-G-ATCCCCG--A-CTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGTAC
*** ** * ** *
16634794 G---GGACCATTGTATGAATTTACAAGCCATAA
841 GCTCGTTTCA-TGGGTG-ATGTAGTA-CCAT-C
* ** **** ** * * ** *
16634824 AAATGGCATTGGAACGTAGAAAT-ATGAAGATGTGCCTAA-A-CCCACCTACCACCCTATTGAT-
1 TAA--GCA-T---ACG--GAGTTCATTCCCA-GT--CTAAGATCGGACCGA--A-CCGAGGGTTG
* ** * *** * * * *
16634885 CCACAACTTGTTCATCCTATCTCTCTGGC-CG-GCGTAGTGCC-CGTATTTTTCTTCAAT-GGAG
52 CGAC-A---GCACATGCT-GGGCTCGGGCATGTGC-TGGTGCCAC--ATTTTTCTTC-ATCGGGG
* * * * * ** **
16634946 CACCA---CCGGAGAACCTGACTGGCGGCATTAGGGTTCTGACGATCGGTGCAGCC-GGAGGGGT
108 CACCATCGCCGGAGAACCTGACCGACGACATTGGGGTTCCGGTGATCGG-GGGGCCAGG-GGGGT
* *
16635007 GTGCACACATGATGTGCCATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
171 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
16635072 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAGAGGTTTGCTACCAATAGCCA
236 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16635137 TTAAAGTGTCTGAAATGGGGACACTTTTTCCAAATGGTCACAAAATTTTGTACACTTCGAGTTTT
301 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTT
* * *
16635202 TAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
366 TAGCTGAATTTTTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * * *
16635267 AACTCCTTCC-AAAAAATTTAAAAAAATCCCAAACCATAAAAAGTTTCCAAAATCATGAAAAATA
431 AACTCCATCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
* * * * *
16635331 GAAAACGATTCGTCTTGCCAGGAAACTTCAAGTTAAGGCTTAAGGGACCATTGTATGAATTTACA
496 GAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
*** * * *
16635396 AGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCGAAACCCACCTATCAGCCTAT
561 AGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCCA-
* * ** * **
16635461 CGATCCATGGCTTGCGCATCCCGTCTCTCTAGCCGGC---GTACTACCCGCCTGCCCG-TCTTTT
624 CGATCCA-GGCTTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTC-GCT
* * ** **
16635522 TGTTTCGTC-AGTCGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATGGGACC-AGACCGAG
686 CGTTTCGTCGA-TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACTAAG
* * * * * * *
16635585 GGTTGCGGTAGAAGGATCAGAAGCACGCAGAGGGGGACCCGA-TCGATCCCTGGCTTG-GCAAT-
749 GGTTGCGGCAGCAGGATCGGCAGCATGCAGAGGGGGA-CCGACT-GATCCCCGACTTGCGC-ATC
* * * * *
16635647 --GCTCCCTCTGGCCGGCTGAGC-CACCGCATGCTTGTTTCGTGGGTTGACTAGGCATACGGAGT
811 CCGC-CCCTCTGGCCGACTGAGCAC-CCGTACGCTCGTTTCATGGG-TGA-T--G--T----AG-
*
16635709 TCATTAAAAGCCTGTC
863 ----T---A-CC-ATC
* * * * * * *
16635725 T-AGCACATGAAGTTCATT-CCAGTCTAA-ATC-GAACGGACCGAGGGTT-CTAAAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
* * * * * *
16635785 GGGCTCGAGCATGTGTTGGTGCGCA-TTTTTTCTT-GTCGGGGCA-CAACG-CGGAGCATCGCCG
66 GGGCTCGGGCATGTGCTGGTGC-CACATTTTTCTTCATCGGGGCACCATCGCCGGAG-A--ACC-
* * * * * * *
16635846 AGAACCTGACGCAGCATTGGGGTTCCAGCGATC-AGGGGCCCGGGTGGTGTGCGCACAGGA-GTG
126 TG-ACC-GACG-A-CATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGGTGTGCGCACATGATGTG
* * *
16635909 CAATGGGTCGCTGGTACTTGG-CCTTATATTGCCCCCCTATTCCC-CACCAAA-CTCGAGAACTC
187 CGATGGGT-GCTGGTACTTGGCCCTTATATTGGCCCCCTA-TCCCTCATCAAACCTCGAGAACTC
* *
16635971 ACACCCTCTTAAAGAGCATTTGAAGAATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
250 ACACCCCCTTAAAGAGCATTTG-AG-ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
16636036 AAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGTATTGT
313 AAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * ** *
16636101 TTTATGCATGCCAACAAAAATACGAGGATCACGTCTACCAAGTTTGCGGCCAAAACTCCATCCGA
378 TTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGA
* * ** * *
16636166 AAAAATTTTAAAAGATCCAGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCG
443 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCA
** *
16636231 TCTTGCCATGAAACTTCACGTGAAGGCTTAAAAGACCATTGTATGAATTTACAAGCAATAAAAAT
508 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
16636296 GGCATTGGCATGCAGAAATATGAAGAAGTGGCTAAACCCACCTACCACCCTATCGATCCAGGGCT
573 GGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATCCA-GGCT
** * * ** * * * * * * * *
16636361 TGTGCATCTCGTCTCTCTAGATGGCGTAGTGCCCGCCCACCCGTCTGC-CTGCTCGTTTCATTGG
635 TACGCATCCCGTCT-TCTGGCCGGCGTGGT-ACCGCCCGCCCGCCCGCTC-GCTCGTTTCGTCGA
* * * * * * * *
16636425 TGGGCTTAGGCATAAGGAGTTCATTCCCAGTCT-AGATTAGACTGGATTGAGGGTTGCGCCAGCA
697 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCA
* * * * * *
16636489 GGATCGGCAGCACGCAAAAGGGAACCCGACCGATCCCCCGACTTGCGCATCTCGCCCCTCTGGCC
762 GGATCGGCAGCATGCAGAGGGGGA-CCGACTGAT-CCCCGACTTGCGCATCCCGCCCCTCTGGCC
* * * * * *
16636554 GACAGAGCACCTGCACGCTTGTTTCGTAGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
825 GACTGAGCACCCGTACGCTCGTTTCAT-GG--G---T--G-AT--GTAG-T-A---CCA-TC
* * * *
16636616 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGCTTGCGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
* * * ** ** *
16636681 AGGCTCGGGCAAGTGTTGGTGCCGTATTTTTCTTTGTCAGGGCATCATCGCCAGGGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATC-GGG-------G-CA--CCATCGCCGG
* * ** * *
16636746 AGAACCTAACCGGCGACATTAAGGTTTCGATGATCGGGGGGACC-GGGGGG-GTGCGCACATGAT
120 AGAACCTGACCGACGACATTGGGGTTCCGGTGATCGGGGGG-CCAGGGGGGTGTGCGCACATGAT
* *
16636809 GTGCGATGGGTGCTGGTACTTGGCCCTTCTATTGGCCCCCTATCCCTCATCAAACCTCGTGAACT
184 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* *
16636874 CACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCGGCCAGTAGCCATTAAAGTGTCTGA
249 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
** * * *
16636939 AATGGGGACACTTTTTTCAAATGTTCACAAAATCTTGTACGCTTCAAGTTTTTAGCTGAATATTT
314 AATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * ** * *
16637004 TTGTGCATGTCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGTGGAAAAAACTCCTTCCAAA
379 TTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCC-GA
* * *
16637069 AAAAATTTTAAAAAATCACGAACTGCAAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
443 AAAAATTTTAAAAAATCCCGAACCG-TAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
* * *
16637134 GTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAGGCCATAAAAA
507 ATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* *
16637199 TGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
572 TGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATCCA-GGC
* * * * * *
16637264 TTGCGCATCCCGTCTCTCTGGCCGACGTAGT---GCCCGCCCGCCTGCCCGCTCGTTTCGTCGGT
634 TTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGAT
** * * * *
16637326 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGA-TCGAGGGTTGCGGTAGTA
698 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACT-AAGGGTTGCGGCAGCA
* * * * * * * *
16637390 GGATCGACAGTACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTG
762 GGATCGGCAGCATGCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCG
* * *
16637455 GCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCATTC
826 ACTGAGCACCCGTACGCTCGTTTCATGGG-TGA--T--G--T----AG-T-A---CCA-TC
* * * * *
16637516 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC-AGATCGAGGGTTACGACAACACATAC
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGA-ACCGAGGGTTGCGACAGCACATGC
* * * * * *
16637580 TGGGCTCAGGCATGTGCTGGTGCCACCTTTTTCTTCGTCGAGGCACCATCGTCGGAGCATCGCGC
65 TGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCGGAG-A--AC-C
* * * ****
16637645 GGAGAACCTGACCAGCAGCAGTAGGGTTCTAACGATCGGGGGGGCCA-GGGGGTGTGCGCACATG
126 --TG-ACC-GA-C-G-A-CATTGGGGTTCCGGTGATC-GGGGGGCCAGGGGGGTGTGCGCACATG
* *
16637709 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCACCATATCCCTCATCAAACCTC-AGGA
182 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GA
* * * * * *
16637773 ACTCACACCCCTTTAAAGAGCATTTGAGATGTTGCAGTTTTGCTACCCAGTAGCCATTAAAGTGG
246 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT-GCCAGTAGCCATTAAAGTGT
* *
16637838 CTGAAATGGGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
310 CTGAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * * * * *
16637903 TTTTTTGTGCATGCGAAAAAAAATACAAGGATCACATCTACCAAGTTTGGTGCAAAAACTCCTTC
375 TTTTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATC
* * * * * *
16637968 CGAAAAAATTTTAAAACATCCTGAACC-CAAAAAGTTTCGAAAATCGTGTAAAAGAGAAAACGAG
440 CGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
* * *
16638032 TCGTCTTGCCATAAAACTTCACGTTAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
505 TCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *** * *
16638097 AATGGCTTTGGGACACAGAAATATGAAGATGTGCCTGAACCCACTTACCACCCTACGGATCCACG
570 AATGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-AC-GATCCA-G
* * * *
16638162 GCTTATGCATCCCGTCTCTCTGGCTGACGTAGTGT-CCGCCCGCCTGCCCGCTCG-T--TTT-GT
632 GCTTACGCATCCCGTCT-TCTGGCCGGCGT-G-GTACCGCCCGCCCGCCCGCTCGCTCGTTTCGT
* * *
16638222 C-AGTTGGCTTAGGCATACGGAGTTCACTCCCAGTCTAAGAT-----CGAA-TCA--GAT-C-G-
694 CGA-TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGC
* * * * * *
16638275 AG--GG-T-TG-TG---GCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCACCCCTCTG
758 AGCAGGATCGGCAGCATGCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTG
** * * *
16638332 GCCTG-CTGAGCGTCCATACGTTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCTAGT
822 GCC-GACTGAGCACCCGTACGCTCGTTTCATGGG-TGA--T--G--T----AG-T-A--CC-A-T
16638396 C
869 C
* * * * * *
16638397 TAAGCATACAGAGTTCCTTCCAAGTCTAAGATCGAACCGGATCGAGGGTTGCGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
* * * * *
16638462 GGGCTCGGGCATGTGCTGGAGCTACCTATTTCTTCATCAGGGCACCATCATCGGAGCATCGCCAG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCA-C--CATC---GC--CG---G
* * ** *
16638527 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGCGGGGCCGGGGGGGATGTGCGCACATG
120 AGAACCTGACCGACGACATTGGGGTTCCGGTGATC-GG-GGGGCCAGGGGGG-TGTGCGCACATG
16638592 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
182 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
16638657 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
247 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * * * *
16638722 AAAATGGGGACAGTTTTTTTAAATGGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAATTT
312 GAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * * * * * * *
16638787 TTTTGTGCATACAAAAAAAAATACAAGAATCATGTCTACCAAGTTTAGGGCCAAAATTCCTTCCG
377 TTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCG
** *
16638852 AAAAAATTTTAAAAAATTTCGAACCGTAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTC
442 AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
*
16638917 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
507 ATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*** *
16638982 TGGCATTGGCATATTGAAATATGAAGATGTGCCTAAACCCACATACCACCCTATCGATCCATGGC
572 TGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATCCA-GGC
** * * * * * * * * * *
16639047 TTGTGCATCCCGTCTCTTTGGTCGGCGTAGTGCCCCCCGCACGCCCGCCCGCTCATTTCATCGGT
634 TTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGAT
* ** * *
16639112 TGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATC-GAACC-AGACCGAGGGTTGTGGTAGC
698 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGA-ACTAAGGGTTGCGGCAGC
* * *
16639175 AGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCC
761 AGGATCGGCAGCATGCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCC
* * * * * ** * *
16639240 GGCTGAGCGCGCGCACGTTTTTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCATTC
825 GACTGAGCACCCGTACGCTCGTTTC-ATGG--G---T--G-AT--GTAG-T-A---CCA-TC
* * * * **
16639302 TAAGCATACGGAGTTCATTCCCAATCTAAGATCGGATCGGACTGAGGGTTGTAACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
* * * * * *
16639367 GGGCTCGAGCATGTTCGGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTTGG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCAT---C---GC--C---GG
* * * * * *
16639432 AGAACCTGACCGACGGCGTTGGGGTTCCGGCGATCAGGGGGGTCGGGGGGGTTGTGCGCATATGA
120 AGAACCTGACCGACGACATTGGGGTTCCGGTGATC-GGGGGGCCAGGGGGG-TGTGCGCACATGA
* * *
16639497 -ATACGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
183 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
16639561 TCACACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
248 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
** *
16639626 AAATGGGGACACTTTTTTCAAACAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
313 AAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
16639691 TTTGTGCATGCGAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCAAAAACTCCTTCCGA
378 TTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGA
* * * * * *
16639756 AAAAATTTTAAAACATCCTGAACC-CAAAAAGTTTCGAAAATCGTGAAAAAGAGAAAACGAGTCG
443 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCA
* * **
16639820 TCTTGCCATAAAACTTCACGTTAAGGCTTAATTGACCATTGTATGAATTTACAAGCCATAAAAAT
508 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *** * *
16639885 GGCATTGGGACACAG-AATATGAAGATGTGCCTGAACCCACTTACCACCCTACGGATCCACGGCT
573 GGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-AC-GATCCA-GGCT
* * * * * *
16639949 TATGCATCCCGTCTCTCTGGCCGACGTAGT---GTCCGCCCGCCTGCCCGCTCGTTTCGTC-AGT
635 TACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGA-T
* * * ** * *
16640010 TGGCTTAGGCATACGGAGTTCATTCCCAATATAAGATC-GAATC-AGACCGAGGGTTGTGGTAGC
698 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGA-ACTAAGGGTTGCGGCAGC
* * * * * * * *
16640073 AGGATTGACAGCACGCAGAGGGGGACCCGA-TCGATCCCCG-GTT-TGCAT-CC-ACCCTTTTG-
761 AGGATCGGCAGCATGCAGAGGGGGA-CCGACT-GATCCCCGACTTGCGCATCCCGCCCCTCTGGC
* * *** * *
16640132 TGACTGAGCATCCGTACGCTCGTTTTGTGACATTGGCAAACAG-AGT-TCATTTTC
824 CGACTGAGCACCCGTACGCTCG--TT-T--CA-TGGGTGA-TGTAGTACCA---TC
* * * ** * * ** * *
16640186 TAAGTAT-CAGAGTTTCCTTCAAAGTCTATTA-AAC-TA--GTTCTTGAGGGTTACGA-AGCACA
1 TAAGCATACGGAG-TTCATTCCCAGTCTA--AGATCGGACCGAAC-CGAGGGTTGCGACAGCACA
** * * * * * *** * *
16640245 TGC--CACTC--GCAT-TGCTGGAGCTAC-CTATTCTCCATGCAGCATCACCA-AGCATCGCAGA
62 TGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCAT-C-GGGGCACCATCGC--CGGAGA
* * **
16640303 ACCTGACCGACGGCATTGGGGTTCC-GAGAT-GGGGGGCC-GGGGGGATGTG-GCACATGATGCC
123 ACCTGACCGACGACATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGG-TGTGCGCACATGATGTG
* *
16640364 CAGATGTGGTGCTGGTACTTGG-CCTT-TCATT-----CCTATCGCTCATCAAAGCTCGAGAA-T
187 C-GATG-GGTGCTGGTACTTGGCCCTTAT-ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * * *
16640421 CACACTCCC--AAAGAGCATTTG-GATCTTACA--ATT-C--CTA-TAG-CATT-AAGTGTCTGA
249 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
16640475 AACTTGGGG-CACTTTTTTCAAATGGTCAC-AAATC-TGTACA-TTTGAGTTTTTAGCTGAATTT
314 AA--TGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* *
16640536 TTTTGTGCAATGCCCAAACAAAAATACAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCT
377 TTTTGTGC-ATG-CCAAA-AAAAATA-AAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCA
* * * **
16640601 TCCAAAAAAATTTTAAAAAATCCCGAACAGAAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACG
438 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* *
16640666 GGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
503 AGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* * *
16640731 AAAATCGCATTGGC-TCGCAGAAATATGTAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
568 AAAATGGCATTGGCAT-GGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATCC
* * * * * * * * *
16640795 ACGACTTGCGCATCTCGTCTCTCTAG-C--CGAGGTA--G--TGCCTGCCCACTCGCTCGTTCCG
630 A-GGCTTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCG
* * *
16640853 TCGATTGGCTTAGGCATACAGAGTTCATTCTCAATCTAAGAT
693 TCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
16640895 TGAACCAGAC
Statistics
Matches: 7499, Mismatches: 1481, Indels: 1269
0.73 0.14 0.12
Matches are distributed among these distances:
846 28 0.00
847 9 0.00
848 75 0.01
849 34 0.00
850 68 0.01
851 110 0.01
852 59 0.01
853 2 0.00
854 3 0.00
855 114 0.02
856 146 0.02
857 15 0.00
858 1 0.00
859 24 0.00
860 24 0.00
863 18 0.00
864 12 0.00
865 21 0.00
866 359 0.05
867 316 0.04
868 36 0.00
869 195 0.03
870 275 0.04
871 10 0.00
872 9 0.00
873 18 0.00
874 22 0.00
875 17 0.00
876 47 0.01
877 189 0.03
878 36 0.00
879 30 0.00
880 45 0.01
881 245 0.03
882 242 0.03
883 337 0.04
884 74 0.01
885 59 0.01
886 122 0.02
887 391 0.05
888 467 0.06
889 106 0.01
890 52 0.01
891 189 0.03
892 114 0.02
893 59 0.01
894 61 0.01
895 36 0.00
896 74 0.01
897 44 0.01
898 145 0.02
899 38 0.01
900 454 0.06
901 179 0.02
902 454 0.06
903 480 0.06
904 266 0.04
905 227 0.03
906 21 0.00
907 9 0.00
908 17 0.00
909 16 0.00
910 10 0.00
911 8 0.00
912 11 0.00
913 16 0.00
914 22 0.00
915 17 0.00
916 6 0.00
917 10 0.00
918 7 0.00
919 4 0.00
920 4 0.00
921 10 0.00
922 6 0.00
923 9 0.00
924 4 0.00
925 2 0.00
927 2 0.00
928 1 0.00
929 5 0.00
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.25
Consensus pattern (869 bp):
TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCGACAGCACATGCT
GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCGGAGAACCTGACC
GACGACATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTG
CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
TTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
AAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTTTAAAA
AATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAA
CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGG
AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCACGATCCAGGCTTACGCATCCCGTCTTC
TGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGATTGGCTTAGGCATACGGAG
TTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCAGGATCGGCAGCATGCAGAG
GGGGACCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGTACGCTCG
TTTCATGGGTGATGTAGTACCATC
Found at i:16632193 original size:25 final size:26
Alignment explanation
Indices: 16632164--16632215 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16632154 GTTGACTTAG
16632164 GCATAC-GAATTCATTCCCAGTCTAA
1 GCATACGGAATTCATTCCCAGTCTAA
*
16632189 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAATTCATTCCCAGTCTAA
16632215 G
1 G
16632216 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 6 0.24
26 19 0.76
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACGGAATTCATTCCCAGTCTAA
Found at i:16632532 original size:888 final size:887
Alignment explanation
Indices: 16631295--16640894 Score: 5309
Period size: 900 Copynumber: 10.8 Consensus size: 887
16631285 TGGGTTGACT
* * *
16631295 TAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGAACCGAGGGTTGCGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* *
16631360 GGGCGCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCA-TC-G-CCGGAGAACCTG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCACTCGGATCGGAGAACCTG
** * * *
16631422 ACCGACGATATTGGGGTTCCGGTGATCCGTGGGGTCAGGGGGGTGTGCGCACATGATGCGCGATG
131 ACCGACGGCATTGGGGTTCCGGTGAT-CGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATG
16631487 GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
195 GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
*
16631552 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGA
260 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
* *
16631617 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCAT
325 CACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAT
* *
16631682 GCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTGT
390 GCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTTT
* * * *
16631747 AAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCAAT
455 AAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCAT
* *
16631812 GAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGT
520 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
*
16631877 ATGGAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCCAACGATCCATGGCTTACGCATCC
585 ATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCC-ACGATCCA-GGCTTACGCATCC
* * *
16631942 CGTCTTTCTAGCCGGTGTGGTACCCGCCCGCCCGCCCGCTCGCTCGTTTTGTCGATTGGCTTAGG
647 CGTC-TTCTGGCCGGCGTGGTA-CCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGATTGGCTTAGG
* * * * * *
16632007 CATATGGAGTTCATTCCCAGCCTAAGATCAGACCGAACCAAGGGTTGCGGTAGTAGGATCGGTAG
710 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCAGGATCGGCAG
* * * *
16632072 CATGTAGAGGGGGATCCGACTGATCCCTGACTTGCGCATCCCACCCCTC-GACCGACTGAGCACC
775 CATGCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACC
16632136 CGTACGCTCGTTTCATGGGTTGACTTAGGCATACGAATTCATTCCCAGTC
839 CGTACGCTCGTTTCATGGGTTGA-TTAGGCATACGAATTCATTCCCAGTC
* * * *
16632186 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTACAATAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * *
16632251 AGGCTCGGGCATTTGTTGGTGCCACATTTTTCTTCGTC-GGGC-CCA-TC-G-TCGGAGAACCTG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCACTCGGATCGGAGAACCTG
* * * * *
16632311 ACCGGCGGCATTGGGGTTCCGGTGATCGAAGGGG-CTGGGGGGTGTGCGTACATGATGTGTGATG
131 ACCGACGGCATTGGGGTTCCGGTGATCG-GGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATG
* * *
16632375 GGTGCTGGTACTTGGCCCCTATATTGGCCCCCTATCCCTCATCAAATCTCAAGAACTCACACCCC
195 GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
* * *
16632440 CTTAAAGAGCATTTGAGATTTTACTGGTTTGCTGCCAGTAGCCATTAATGTGTTTGAAATGGGGA
260 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
* *
16632505 CACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAGTTTTTAGC-GAAATTTTTTTGTGCA
325 CACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTTTTTGTGCA
* * * *
16632569 TGCCAAAAAAAATAAAAGGATAACGTCTACCAAGTTTGGGACCAAAACTGCTTCCG-AAAAATTT
389 TGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTT
*
16632633 TAAAAAATCCCG-ACTCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
454 TAAAAAATCCCGAAC-CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCC
* *
16632697 ATGAAACTTCACGTGAAGGCTTAAGGGGCCATTATATGAATTTACAAGCCATAAAAATGGCATTG
518 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* *
16632762 GCA-GGCTGAAATATGGAGATGTGCCTAAACCCACCT---A--C-C-A-CC---C-T----AT--
583 GCATGG-AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCACGATCCAGGCTTACGCATCC
* * * *
16632808 C-TC-TCTGGCTGGCGTAGT---GCCCGCCCGCCCACT---T-GTTTCGTCGGA-CGGCTTAGGC
647 CGTCTTCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTC-GATTGGCTTAGGC
* * * * * **
16632863 TTACGGAGTTCATTCCCAGTCTTAGATCAGACCGAAGTGAGGGTTACGGCAGCAGGATCCACAGC
711 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCAGGATCGGCAGC
* * * **
16632928 ACGCAGAGGGGGACCCGA-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGTTGAGCACC
776 ATGCAGAGGGGGA-CCGACT-GATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACC
* * *
16632992 CGCACGCTCGTTTCATGGGTTGATTGGGCATACAAAGTTCATTCCCAGTC
839 CGTACGCTCGTTTCATGGGTTGATTAGGCATACGAA-TTCATTCCCAGTC
* * * * *
16633042 TAAGCATACGGAGTTCATTCCCAATCTAAGATCAGATCAGACCGAGGGTTGCGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* * ** *
16633107 GGGCTCGAGCATGTGTTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCA-C-TC-G-G-AT---CGG
* * *
16633172 AGAACCTGACCGACGGAATTGGGGTTCCGGTGATCGGGGGGGCCAAGGGGCTGTGCGCACATGAT
123 AGAACCTGACCGACGGCATTGGGGTTCCGGTGATC-GGGGGGCCAGGGGGGTGTGCGCACATGAT
*
16633237 GTGCGAAGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
187 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* *
16633302 CACACCCCCTTAAGGAGCATTTGAGATTCTACAGGTTTGCTG-CAGTAGCCATTAAAGTGTCTGA
252 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * *
16633366 AATGGGGACACTTTTATCAAATGGGCTCAAAATCTTGTCCACTTCGAGTTTTTAGCTGAATTTTT
317 AATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* ** * * *
16633431 TTGTGCTTGCTGAAAAAAATAAAAGGATCATGTCTACCATGTTTGGGGCCAAAA-TGCCTTCCGA
382 TTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CCATCCGA
* * *
16633495 TAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCA
446 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCA
* * *
16633560 TTTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTAACAAGCCATTAAAAT
511 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
16633625 GGTATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCT-------ACG----A--C---C
576 GGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCACGATCCAGGCTTAC
** * * * *
16633674 -CAT--C-TC-TCTAACCGGCGTAGTGCCTGCCCACCCGCCCG-TCCGCTCGTTCCGTCGATTGG
641 GCATCCCGTCTTCTGGCCGGCGTGGTACC-GCCCGCCCGCCCGCT-CGCTCGTTTCGTCGATTGG
* * * * ** ** **
16633733 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGAGTGAGGGTTGCTTCCAAAAAAA
704 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGC-GGCAGCAGGA
**** ** * * ***** *** * * **** * *** ** ** * *
16633798 TTTTAAAAAATCCTGAACCATAAAAAGT-TTCAAAAATCATGAAAATTAGAAAACGAGTCATCTT
768 -TCGGCAGCATGCAGAGGGGGACCGACTGATCCCCGA-CTTGCGCA-T----CCCG-CCCCTCTG
* * * * *** * * **
16633862 GCC-A-TGAAACTTCCCGTGAAGGCTTAAAGGACCAT-TGTATGAATTTACAAGCCATAAAAATG
825 GCCGACTG-AGC-ACCCGT--ACGC-T--CGTTTCATGGGT-TG-A-TT---AGGCATACGAAT-
* **
16633924 GCATTGGCA-TGC
876 TCATTCCCAGT-C
* * * ** * ** * ** ** * * *
16633936 --AGAAATATGAAGATGTGCCTAAACCCA-CCTACCACCCTA-TTGA-TGCATGGCTTGCG-CAT
1 TAAG-CATACG--GA-GT-TC-ATTCCCAGTCTAAGATCGGACCGGACCG-A-GGGTTGCGACAG
* * * * * ** * * **
16633995 CTCGT-CT---CTCTGG--TCG-GCATAGTGCC-CA----CCGAC-CCGCCGGC-CCACTCGTTT
58 CACATGCTGGGCTCGGGCAT-GTGC-TGGTGCCACATTTTTCTTCATCG-GGGCACCACTCGGAT
** ** * ** * * **** * * * *
16634046 CGTCG--GTTGGCTTA-GGCA-TGCAGAGTTCATTCCCAGTCTAAGATCAAACTGGACTGAGGGT
120 CGGAGAACCTGACCGACGGCATTG--G-G---GTT-CC-G-GT--GATC-GGGGGGCCAGGGGGG
* * * * * * * ** ***** *
16634107 TGTG-GCAGTAGGAT-TGACAGCACGCAGAG-GGGGACCCGGCCAATCCCCGGCTTGCGCATCCC
173 TGTGCGCA-CATGATGTG-C-G-ATG-GGTGCTGGTACTTGG-C---CCTTATATTG-GC-CCCC
* ** * * * * * ** * ** * *
16634169 -ACCCCTCGGGC-CAGCT-GAGCACCCACACGCCCGTT-TCGTG-GGTTGA-CTTAGGCATACAG
227 TATCCCTC-ATCAAACCTCGAGAACTCACAC-CCCCTTAAAGAGCATTTGAGATT----TTACAG
*** * * * * **** *
16634228 AGTTCATTCCCAGTCTAAGCATACGGAGTT-CATTCCCAGTCT-AAGAT--CGA-AC--CAGACC
286 -GTTTGCTGCCAG--T-AGC---C--A-TTAAAGT----GTCTGAA-ATGGGGACACTTTTTTCA
* * * * * * ** * * *
16634286 AAGGGTTGCGACAGCACATGCTGGGCT-CGGGCAT-GTGTTGGT-GCCGCATTTTTCT-T-C--G
336 AATGG--GC-ACA--AAAT-CT-TG-TAC--ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
**** ** **** ** ** ** * ******
16634344 CCGGGGCACCATCGCCGGAGT-AC--C-ACC--G---GAGAACC-TGACT-GGT-AGCATTGGGG
391 CC-AAAAAAAATAAAAGGA-TCACGTCTACCAAGTTTG-GGGCCAAAACTCCATCCG-AAAAAAT
***** ** ** * *** * * **** ****
16634397 TTTCGGCGATCGGGGGGCCG-GAGGGGTGGGTGTGCACACAT-GATGTGCCAT-GGGTGCTG-GT
452 TTTAAAAAATC-CCGAACCGTAAAAAGT---T-T-CAAAAATCG-TGAAAAATAGAAAAC-GAGT
* * * * * *** * **** * * * *
16634458 -A-CTTGGCCCTTATA-TTGGCCCCCT-ATCCCTCATCAAACC--T-TAAGAACTCAC-AGCCCC
509 CATCTT-GCCATGAAACTT---CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG-CCA
* * * * * * * *** *
16634515 T-TAAA-GAGCATT--C---GAG--ATTTTACAGGTTTG-CT---GCCA-GTAGCCATTAAAG-T
569 TAAAAATG-GCATTGGCATGGAGAAATATGA-AGATGTGCCTAAACCCACCTA-CCACCCACGAT
* * *** ** * ** * *** ** * * * ***** *
16634565 GTCTGAAATGGGGA-CACTTTTTTCAAATGGTCACGAAATCTTATACACTTCGAGTTTTCAGCT-
631 -CCAGGCTTACGCATC-CCGTCTTC---TGG-C-CGGCGTGGTA-CCGC-CCG-CCCGCCCGCTC
* * * * ** *** * * *
16634628 GAAAT-TTTTTGT-GCA-TGCCAACAAAAATACAGGA--TCACGTCTACCAAGTTTGGGGCAAAA
686 G--CTCGTTTCGTCG-ATTGGC-TTAGGCATAC-GGAGTTCA--T-T-CCCAG--T----CTAAG
*** ** *** ***** * * * * ** ** * * * * ** *
16634688 ATCCTTCC-AAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATGGTGA-AAAATA
736 ATCAGACCGAACTAAGGGTTGCGGCA-GCAGGATCGGCAGCA--TGC--AGAGGGGGACCGACT-
** ** ** * ** * * * * *
16634751 GAAAACGAGTCATCTTGC-CAT---GAAACTTCATGTGAAGGCTTA--A--GGGAC-CAT--TGT
795 G-ATCCCCG--A-CTTGCGCATCCCG-CCCCTC-TG-GCCGACTGAGCACCCGTACGC-TCGTTT
** * ** * ** * *** *
16634805 -ATGAATTTACAAGCCATAAAAATGGCATTGGAACGTA
852 CATGGGTTGATTAGGCATACGAAT-TCATTCCCA-GTC
* * * ** * ** * ** ** *** ** *
16634842 GAA--ATATGAAGATGTGCCTAAACCCA-CCTACCACCCTA-TTGATCC-ACAACTTG-TTCATC
1 TAAGCATACG--GA-GT-TC-ATTCCCAGTCTAAGATCGGACCGGA-CCGA-GGGTTGCGACAGC
* * * *
16634901 -CTAT-CT---CTCTGGC-CG-GCGTAGTGCC-CGTATTTTTCTTCAAT-GGAGCACCA--C---
59 AC-ATGCTGGGCTCGGGCATGTGC-TGGTGCCAC--ATTTTTCTTC-ATCGGGGCACCACTCGGA
* * * * ** ** *
16634952 -CGGAGAACCTGACTGGCGGCATTAGGGTTCTGACGATCGGTGCAGCC-GGAGGGGTGTGCACAC
119 TCGGAGAACCTGACCGACGGCATTGGGGTTCCGGTGATCGG-GGGGCCAGG-GGGGTGTGCGCAC
*
16635015 ATGATGTGCCATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
182 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
* * *
16635080 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAGAGGTTTGCTACCAATAGCCATTAAAGTG
247 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* * *
16635145 TCTGAAATGGGGACACTTTTTCCAAATGGTCACAAAATTTTGTACACTTCGAGTTTTTAGCTGAA
312 TCTGAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * * *
16635210 TTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
377 TTTTTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCAT
* * * * *
16635275 CC-AAAAAATTTAAAAAAATCCCAAACCATAAAAAGTTTCCAAAATCATGAAAAATAGAAAACGA
442 CCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
* * * * *
16635339 TTCGTCTTGCCAGGAAACTTCAAGTTAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
507 GTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
*** * * *
16635404 AAATGGCATTGGCACATAGAAATATGAAGATGTGCCGAAACCCACCTATCAGCCTATCGATCCAT
572 AAATGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCCA-CGATCCA-
* * ** * ** *
16635469 GGCTTGCGCATCCCGTCTCTCTAGCCGGC---GTACTACCCGCCTGCCCG-TCTTTTTGTTTCGT
634 GGCTTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTC-GCTCGTTTCGT
* ** **
16635530 C-AGTCGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATGGGACC-AGACCGAGGGTTGCGG
697 CGA-TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACTAAGGGTTGCGG
* * * * * * *
16635593 TAGAAGGATCAGAAGCACGCAGAGGGGGACCCGA-TCGATCCCTGGCTTG-GCAAT---GCTCCC
760 CAGCAGGATCGGCAGCATGCAGAGGGGGA-CCGACT-GATCCCCGACTTGCGC-ATCCCGC-CCC
* * * * * * *
16635653 TCTGGCCGGCTGAGC-CACCGCATGCTTGTTTCGTGGGTTGACTAGGCATACGGAGTTCATTAAA
821 TCTGGCCGACTGAGCAC-CCGTACGCTCGTTTCATGGGTTGATTAGGCATAC-GAATTCATT---
* *
16635717 AGCCTGTC
881 -CCCAGTC
* * * * * *
16635725 T-AGCACATGAAGTTCATT-CCAGTCTAA-ATC-GAACGGACCGAGGGTT-CTAAAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * * * *
16635785 GGGCTCGAGCATGTGTTGGTGCGCA-TTTTTTCTT-GTCGGGGCACAACGCGGAGCATCGCCGAG
66 GGGCTCGGGCATGTGCTGGTGC-CACATTTTTCTTCATCGGGGCACCACTC-G-G-ATCG--GAG
* * * * * * *
16635848 AACCTGA-CG-CAGCATTGGGGTTCCAGCGATC-AGGGGCCCGGGTGGTGTGCGCACAGGA-GTG
125 AACCTGACCGACGGCATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGGTGTGCGCACATGATGTG
* * *
16635909 CAATGGGTCGCTGGTACTTGG-CCTTATATTGCCCCCCTATTCCC-CACCAAA-CTCGAGAACTC
190 CGATGGGT-GCTGGTACTTGGCCCTTATATTGGCCCCCTA-TCCCTCATCAAACCTCGAGAACTC
* *
16635971 ACACCCTCTTAAAGAGCATTTGAAGAATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
253 ACACCCCCTTAAAGAGCATTTG-AG-ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
16636036 AAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGTATTGT
316 AAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * ** *
16636101 TTTATGCATGCCAACAAAAATACGAGGATCACGTCTACCAAGTTTGCGGCCAAAACTCCATCCGA
381 TTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGA
* * ** * *
16636166 AAAAATTTTAAAAGATCCAGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCG
446 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCA
** *
16636231 TCTTGCCATGAAACTTCACGTGAAGGCTTAAAAGACCATTGTATGAATTTACAAGCAATAAAAAT
511 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
16636296 GGCATTGGCATGCAGAAATATGAAGAAGTGGCTAAACCCACCTACCACCCTATCGATCCAGGGCT
576 GGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATCCA-GGCT
** * * ** * * * * * * * *
16636361 TGTGCATCTCGTCTCTCTAGATGGCGTAGTGCCCGCCCACCCGTCTGC-CTGCTCGTTTCATTGG
638 TACGCATCCCGTCT-TCTGGCCGGCGTGGT-ACCGCCCGCCCGCCCGCTC-GCTCGTTTCGTCGA
* * * * * * * *
16636425 TGGGCTTAGGCATAAGGAGTTCATTCCCAGTCT-AGATTAGACTGGATTGAGGGTTGCGCCAGCA
700 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCA
* * * * * *
16636489 GGATCGGCAGCACGCAAAAGGGAACCCGACCGATCCCCCGACTTGCGCATCTCGCCCCTCTGGCC
765 GGATCGGCAGCATGCAGAGGGGGA-CCGACTGAT-CCCCGACTTGCGCATCCCGCCCCTCTGGCC
* * * * * * *
16636554 GACAGAGCACCTGCACGCTTGTTTCGTAGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
828 GACTGAGCACCCGTACGCTCGTTTCATGGGTTGA-TTAGGCATAC-GAATTCATTCCCAGTC
* * *
16636616 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGCTTGCGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * ** ** * * *
16636681 AGGCTCGGGCAAGTGTTGGTGCCGTATTTTTCTTTGTCAGGGCATCATCGCCAGGGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCA-C-TC--GG-AT---CGG
* * * ** * *
16636746 AGAACCTAACCGGCGACATTAAGGTTTCGATGATCGGGGGGACC-GGGGGG-GTGCGCACATGAT
123 AGAACCTGACCGACGGCATTGGGGTTCCGGTGATCGGGGGG-CCAGGGGGGTGTGCGCACATGAT
* *
16636809 GTGCGATGGGTGCTGGTACTTGGCCCTTCTATTGGCCCCCTATCCCTCATCAAACCTCGTGAACT
187 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* *
16636874 CACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCGGCCAGTAGCCATTAAAGTGTCTGA
252 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
** * * *
16636939 AATGGGGACACTTTTTTCAAATGTTCACAAAATCTTGTACGCTTCAAGTTTTTAGCTGAATATTT
317 AATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * ** * *
16637004 TTGTGCATGTCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGTGGAAAAAACTCCTTCCAAA
382 TTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCC-GA
* * *
16637069 AAAAATTTTAAAAAATCACGAACTGCAAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
446 AAAAATTTTAAAAAATCCCGAACCG-TAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
* * *
16637134 GTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAGGCCATAAAAA
510 ATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* *
16637199 TGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
575 TGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATCCA-GGC
* * * * * *
16637264 TTGCGCATCCCGTCTCTCTGGCCGACGTAGT---GCCCGCCCGCCTGCCCGCTCGTTTCGTCGGT
637 TTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGAT
** * * * *
16637326 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGA-TCGAGGGTTGCGGTAGTA
701 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACT-AAGGGTTGCGGCAGCA
* * * * * * * *
16637390 GGATCGACAGTACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCTG
765 GGATCGGCAGCATGCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCG
* * * * *
16637455 GCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCATTC
829 ACTGAGCACCCGTACGCTCGTTTCATGGGTTGA-TTAGGCATAC-GAATTCATTCCCAGTC
* * * * * *
16637516 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTACGACAACACATACT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * *
16637581 GGGCTCAGGCATGTGCTGGTGCCACCTTTTTCTTCGTCGAGGCACCATCGTCGGAGCATCGCGCG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCA-C-TC-G-G-AT----CG
* * * ****
16637646 GAGAACCTGACC-AGCAGCAGTAGGGTTCTAACGATCGGGGGGGCCA-GGGGGTGTGCGCACATG
122 GAGAACCTGACCGA-CGGCATTGGGGTTCCGGTGATC-GGGGGGCCAGGGGGGTGTGCGCACATG
* *
16637709 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCACCATATCCCTCATCAAACCTC-AGGA
185 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GA
* * * * * *
16637773 ACTCACACCCCTTTAAAGAGCATTTGAGATGTTGCAGTTTTGCTACCCAGTAGCCATTAAAGTGG
249 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT-GCCAGTAGCCATTAAAGTGT
* *
16637838 CTGAAATGGGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
313 CTGAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * * * * *
16637903 TTTTTTGTGCATGCGAAAAAAAATACAAGGATCACATCTACCAAGTTTGGTGCAAAAACTCCTTC
378 TTTTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATC
* * * * * *
16637968 CGAAAAAATTTTAAAACATCCTGAACC-CAAAAAGTTTCGAAAATCGTGTAAAAGAGAAAACGAG
443 CGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
* * *
16638032 TCGTCTTGCCATAAAACTTCACGTTAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
508 TCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *** * *
16638097 AATGGCTTTGGGACACAGAAATATGAAGATGTGCCTGAACCCACTTACCACCCTACGGATCCACG
573 AATGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-AC-GATCCA-G
* * * *
16638162 GCTTATGCATCCCGTCTCTCTGGCTGACGTAGTGT-CCGCCCGCCTGCCCGCTCG-T--TTT-GT
635 GCTTACGCATCCCGTCT-TCTGGCCGGCGT-G-GTACCGCCCGCCCGCCCGCTCGCTCGTTTCGT
* * *
16638222 C-AGTTGGCTTAGGCATACGGAGTTCACTCCCAGTCTAAGAT-----CGAA-TCA--GAT-C-G-
697 CGA-TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGC
* * * * * *
16638275 AG--GG-T-TG-TG---GCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCACCCCTCTG
761 AGCAGGATCGGCAGCATGCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTG
** * * * * *
16638332 GCCTG-CTGAGCGTCCATACGTTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCTAGT
825 GCC-GACTGAGCACCCGTACGCTCGTTTCATGGGTTGA-TTAGGCATAC-GAATTCATTCCCAGT
16638396 C
887 C
* * * * *
16638397 TAAGCATACAGAGTTCCTTCCAAGTCTAAGATCGAACCGGATCGAGGGTTGCGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * * *
16638462 GGGCTCGGGCATGTGCTGGAGCTACCTATTTCTTCATCAGGGCACCATCATCGGAGCATCGCCAG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCA-C-TC-G-G-ATCG---G
* ** *
16638527 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGCGGGGCCGGGGGGGATGTGCGCACATG
123 AGAACCTGACCGACGGCATTGGGGTTCCGGTGATC-GG-GGGGCCAGGGGGG-TGTGCGCACATG
16638592 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
185 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
16638657 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
250 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * * * *
16638722 AAAATGGGGACAGTTTTTTTAAATGGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAATTT
315 GAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * * * * * * *
16638787 TTTTGTGCATACAAAAAAAAATACAAGAATCATGTCTACCAAGTTTAGGGCCAAAATTCCTTCCG
380 TTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCG
** *
16638852 AAAAAATTTTAAAAAATTTCGAACCGTAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTC
445 AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
*
16638917 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
510 ATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*** *
16638982 TGGCATTGGCATATTGAAATATGAAGATGTGCCTAAACCCACATACCACCCTATCGATCCATGGC
575 TGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATCCA-GGC
** * * * * * * * * * *
16639047 TTGTGCATCCCGTCTCTTTGGTCGGCGTAGTGCCCCCCGCACGCCCGCCCGCTCATTTCATCGGT
637 TTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGAT
* ** * *
16639112 TGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATC-GAACC-AGACCGAGGGTTGTGGTAGC
701 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGA-ACTAAGGGTTGCGGCAGC
* * *
16639175 AGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCC
764 AGGATCGGCAGCATGCAGAGGGGGA-CCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCC
* * * * * ** * * * *
16639240 GGCTGAGCGCGCGCACGTTTTTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCATTC
828 GACTGAGCACCCGTACGCTCGTTTCATGGGTTGA-TTAGGCATAC-GAATTCATTCCCAGTC
* * * **
16639302 TAAGCATACGGAGTTCATTCCCAATCTAAGATCGGATCGGACTGAGGGTTGTAACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
* * * * * * *
16639367 GGGCTCGAGCATGTTCGGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTTGG
66 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCA-C-TC-G-G-ATC---GG
* * * * *
16639432 AGAACCTGACCGACGGCGTTGGGGTTCCGGCGATCAGGGGGGTCGGGGGGGTTGTGCGCATATGA
123 AGAACCTGACCGACGGCATTGGGGTTCCGGTGATC-GGGGGGCCAGGGGGG-TGTGCGCACATGA
* * *
16639497 -ATACGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
186 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
16639561 TCACACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
251 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
** *
16639626 AAATGGGGACACTTTTTTCAAACAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
316 AAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
16639691 TTTGTGCATGCGAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCAAAAACTCCTTCCGA
381 TTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGA
* * * * * *
16639756 AAAAATTTTAAAACATCCTGAACC-CAAAAAGTTTCGAAAATCGTGAAAAAGAGAAAACGAGTCG
446 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCA
* * **
16639820 TCTTGCCATAAAACTTCACGTTAAGGCTTAATTGACCATTGTATGAATTTACAAGCCATAAAAAT
511 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *** * *
16639885 GGCATTGGGACACAG-AATATGAAGATGTGCCTGAACCCACTTACCACCCTACGGATCCACGGCT
576 GGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-AC-GATCCA-GGCT
* * * * * *
16639949 TATGCATCCCGTCTCTCTGGCCGACGTAGT---GTCCGCCCGCCTGCCCGCTCGTTTCGTC-AGT
638 TACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGA-T
* * * ** * *
16640010 TGGCTTAGGCATACGGAGTTCATTCCCAATATAAGATC-GAATC-AGACCGAGGGTTGTGGTAGC
701 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGA-ACTAAGGGTTGCGGCAGC
* * * * * * * *
16640073 AGGATTGACAGCACGCAGAGGGGGACCCGA-TCGATCCCCG-GTT-TGCAT-CC-ACCCTTTTG-
764 AGGATCGGCAGCATGCAGAGGGGGA-CCGACT-GATCCCCGACTTGCGCATCCCGCCCCTCTGGC
* * * ** * * *
16640132 TGACTGAGCATCCGTACGCTCGTTT--TGTG-ACATT-GGCAAACAGAGTTCATT----TTC
827 CGACTGAGCACCCGTACGCTCGTTTCATGGGTTGATTAGGCATAC-GAATTCATTCCCAGTC
* * * ** * * ** * *
16640186 TAAGTAT-CAGAGTTTCCTTCAAAGTCTATTA-AAC-TA--GTTCTTGAGGGTTACGA-AGCACA
1 TAAGCATACGGAG-TTCATTCCCAGTCTA--AGATCGGACCGGAC-CGAGGGTTGCGACAGCACA
** * * * * * ** * * *
16640245 TGC--CACTC--GCAT-TGCTGGAGCTAC-CTATTCTCCAT-GCAGCATCAC-CAAGCATCGCAG
62 TGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCACTC--GGATCGGAG
* *
16640302 AACCTGACCGACGGCATTGGGGTTCC-GAGAT-GGGGGGCC-GGGGGGATGTG-GCACATGATGC
125 AACCTGACCGACGGCATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGG-TGTGCGCACATGATGT
* * *
16640363 CCAGATGTGGTGCTGGTACTTGG-CCTT-TCATT-----CCTATCGCTCATCAAAGCTCGAGAA-
189 GC-GATG-GGTGCTGGTACTTGGCCCTTAT-ATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * * *
16640420 TCACACTCCC--AAAGAGCATTTG-GATCTTACA--ATT-C--CTA-TAG-CATT-AAGTGTCTG
251 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
16640474 AAACTTGGGG-CACTTTTTTCAAATGGTCAC-AAATC-TGTACA-TTTGAGTTTTTAGCTGAATT
316 AAA--TGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
*
16640535 TTTTTGTGCAATGCCCAAACAAAAATACAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTC
379 TTTTTGTGC-ATG-CCAAA-AAAAATA-AAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * * * **
16640600 TTCCAAAAAAATTTTAAAAAATCCCGAACAGAAAAAAGTTTTGAAAATCGTGAAAAATAGAAAAC
440 ATCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
* *
16640665 GGGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
505 GAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* * *
16640730 AAAAATCGCATTGGC-TCGCAGAAATATGTAGATGTGCCTAAACCCACCTACCACCCTATCGATC
570 AAAAATGGCATTGGCAT-GGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-A-CGATC
* * * * * * * * *
16640794 CACGACTTGCGCATCTCGTCTCTCTAG-C--CGAGGTA--G--TGCCTGCCCACTCGCTCGTTCC
632 CA-GGCTTACGCATCCCGTCT-TCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTC
* * *
16640852 GTCGATTGGCTTAGGCATACAGAGTTCATTCTCAATCTAAGAT
695 GTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
16640895 TGAACCAGAC
Statistics
Matches: 6846, Mismatches: 1375, Indels: 1019
0.74 0.15 0.11
Matches are distributed among these distances:
846 28 0.00
847 9 0.00
848 75 0.01
849 34 0.00
850 68 0.01
851 110 0.02
852 59 0.01
853 2 0.00
854 3 0.00
855 118 0.02
856 147 0.02
857 16 0.00
858 3 0.00
859 23 0.00
860 23 0.00
861 2 0.00
863 18 0.00
864 13 0.00
865 20 0.00
866 16 0.00
867 4 0.00
868 32 0.00
869 189 0.03
870 274 0.04
871 6 0.00
872 3 0.00
873 21 0.00
874 13 0.00
875 23 0.00
876 23 0.00
877 97 0.01
878 39 0.01
879 32 0.00
880 70 0.01
881 254 0.04
882 224 0.03
883 331 0.05
884 69 0.01
885 51 0.01
886 114 0.02
887 384 0.06
888 479 0.07
889 91 0.01
890 54 0.01
891 204 0.03
892 111 0.02
893 63 0.01
894 77 0.01
895 52 0.01
896 80 0.01
897 61 0.01
898 140 0.02
899 38 0.01
900 497 0.07
901 184 0.03
902 446 0.07
903 474 0.07
904 263 0.04
905 334 0.05
906 15 0.00
907 8 0.00
908 19 0.00
909 11 0.00
910 8 0.00
911 6 0.00
912 9 0.00
913 10 0.00
914 12 0.00
915 8 0.00
916 2 0.00
917 4 0.00
918 1 0.00
919 1 0.00
920 5 0.00
921 7 0.00
922 7 0.00
923 10 0.00
924 5 0.00
925 2 0.00
927 2 0.00
928 1 0.00
929 5 0.00
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.25
Consensus pattern (887 bp):
TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCT
GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCACTCGGATCGGAGAACCTG
ACCGACGGCATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGG
GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
ACTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
CCAAAAAAAATAAAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTTTA
AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATG
AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
TGGAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCACGATCCAGGCTTACGCATCCCGTC
TTCTGGCCGGCGTGGTACCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGATTGGCTTAGGCATACG
GAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGGGTTGCGGCAGCAGGATCGGCAGCATGCA
GAGGGGGACCGACTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGTACGC
TCGTTTCATGGGTTGATTAGGCATACGAATTCATTCCCAGTC
Found at i:16633048 original size:26 final size:26
Alignment explanation
Indices: 16633019--16633071 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16633009 GGTTGATTGG
*
16633019 GCATACAAAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAATCTAA
**
16633045 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACAAAGTTCATTCCCAATCTAA
16633071 G
1 G
16633072 ATCAGATCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.26, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACAAAGTTCATTCCCAATCTAA
Found at i:16633536 original size:870 final size:857
Alignment explanation
Indices: 16630365--16633784 Score: 3329
Period size: 866 Copynumber: 3.9 Consensus size: 857
16630355 AGGCTGAGTG
* * * * * * *
16630365 CCCGCATGCTCGTTTTA-GGGTTTGACTTAGGCATACGGAGTTCATTCCCAATATAAGCATATGG
1 CCCGCACGCTCGTTTCATGGG-TTGACTTAGGCATAC-AAATTCATTCCCAGTCTAAGCATACGG
* * ** * * * * * *
16630429 AGTTCATTCCCAGTGTAAGATTGGATCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCA
64 AGTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTACAACAGCACATGCTAGGCTCGAGCA
* * * **
16630494 TGTGCTGGTGCCGCATATTTCTTCACCGGGGCACCATCGTCGGAGCATCGTCGAAGAACCTGACC
129 TGTGTTGGTGCCACATTTTTCTTCGTC-GGGC-CCA---TC---G--TCG--G-AGAACCTGACC
* * * * * * **
16630559 GGCGGCATTGGGGTTCCAGTGATCG-GGGGGCCAGGGGGGGTGTGCGCACATGATGTGCGGTGGG
181 GACGGAATTGGGGTTCCGGTGATCGAAGGGG-CA-AGGGGCTGTGCGCACATGATGTGCGAAGGG
* * * *
16630623 TGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCACACCCCCT
244 TGCTGGTACTTGGCCCCTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCT
* * *
16630688 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCA-TAGCCATTAAAGTGTCTGAAATAGGGACA
309 TAAAGAGCATTTGAGATTCTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * *
16630752 CTTTTTTCAAATGGGCACAAAATCTTGTACACTTCAAGTTTTTAGCTG-AATTTTTTTGCGCATG
374 CTTTTATCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGC-GAAATTTTTTTGTGCATG
* * * * *
16630816 CCAACAAAAATACAAGGATCACGTCTACCATGTTTAGGG-CCAAAACT-CAATCCGAAAAAAATT
438 CCAAAAAAAATAAAAGGATAACGTCTACCAAGTTT-GGGACCAAAACTGC-TTCCG--AAAAATT
* ** * * *
16630879 TTAAAAAATCCCGAAC-CGCAAAAAGTTTTGAAAACCGTGAAAAATAGAAAACGAATCATCCTGC
499 TTAAAAAATCCCG-ACTCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGC
* * * * *
16630943 CATGAAACTTGACGTGAAGGCCTAAGGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATT
563 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTAACAAGCCATAAAAATGGCATT
* *
16631008 GGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTATCGATCCACGGCTTACGCAT
628 GGCAGGCAGAAATATGAAGATGTGCCTAAACCCACCT---ACC-A-C---CCA-----T---C-T
* * * * * * * * *
16631073 CCTGTCTATCTGGCCG-ACGTGGTGACCGCCCGCCCGTCCGCCCGCTCATTTCATCAATTGGCTT
676 -C--TCTAACCGG-CGTA-G-GCTG--C-CCCG--C--CCGCCCACTCGTTCCGTCGATCGGCTT
* * ** * * ** * *
16631137 AGGCATACAGAGTTCATTCTCAGTCTAAGATTGGACC-AGACTAAGGGTTGTGACAGCAGGATCG
728 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-AGTGAGGGTTACGGCAGCAGGATCC
* * * * * * * * *
16631201 GCAGCATGCATAGAGGGACTCGACCGATCCCCGACTTGCGCATCTCGCCCCTCTGGCCGACTGAG
792 ACAGCACGCAGAGGGGGACCCGACTGATCCCCGACTTGCGCATCCCACCCCTC-GACCGACTGAG
*
16631266 CG
856 CA
* *
16631268 CCCGTACACTCGTTTCAT-GG--G--TT--G-----------A----C--T-TAAGCATACGGAG
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAAATTCATTCCCAGTCTAAGCATACGGAG
* ** * ** * * *
16631308 TTCATTCCCAGTCTAAGATTGGACC-GAACCGAGGGTTGCGGCAGCACATGCTGGGCGCGGGCAT
66 TTCATTCCCAATCTAAGATCAGACCAG-ACCGAGGGTTACAACAGCACATGCTAGGCTCGAGCAT
* * *
16631372 GTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCGGAGAACCTGACCGAC-GATATTGG
130 GTGTTGGTGCCACATTTTTCTTCGTC-GGGC-CCATCGTCGGAGAACCTGACCGACGGA-ATTGG
* * * * *
16631436 GGTTCCGGTGATCCG-TGGGGTCAGGGGGGTGTGCGCACATGATGCGCGATGGGTGCTGGTACTT
192 GGTTCCGGTGAT-CGAAGGGG-CAAGGGGCTGTGCGCACATGATGTGCGAAGGGTGCTGGTACTT
* *
16631500 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATT
255 GGCCCCTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATT
* * *
16631565 TGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
320 TGAGATTCTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTATCAAA
* **
16631630 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTTTGTGCATGCCAAAAAAAATA
385 TGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCGAAATTTTTTTGTGCATGCCAAAAAAAATA
* * * * * * *
16631695 CAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTGTAAAAAATCTCGAA
450 AAAGGATAACGTCTACCAAGTTTGGGACCAAAACTGCTTCCG-AAAAATTTTAAAAAATCCCG-A
* * *
16631760 C-CGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCAATGAAACTTCACGT
513 CTCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGT
* * * *
16631824 GATGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGTATGG-AGAAATA
578 GAAGGCTTAAGGGACCATTATATGAATTAACAAGCCATAAAAATGGCATTGGCA-GGCAGAAATA
* *
16631888 TGAAGATGTGCCAAAACCCACCTACCACCCCAACGATCCATGGCTTACGCATCCCGTCTTTCTAG
642 TGAAGATGTGCCTAAACCCACCTACCA-CCCATC--T-C-T--C-TA---A--CCG--------G
* * * * ** * *
16631953 CCGGTGTGGTACCCGCCCGCCCGCCCGCTCGCTCGTTTTGTCGATTGGCTTAGGCATATGGAGTT
686 -C-GT-AGG---CTG--C-CCCGCCCGCCCACTCGTTCCGTCGATCGGCTTAGGCATACGGAGTT
* *** * * * *** * *
16632018 CATTCCCAGCCTAAGATCAGACCGAACCAAGGGTTGCGGTAGTAGGATCGGTAGCATGTAGAGGG
742 CATTCCCAGTCTAAGATCAGACCGAAGTGAGGGTTACGGCAGCAGGATCCACAGCACGCAGAGGG
* *
16632083 GGATCCGACTGATCCCTGACTTGCGCATCCCACCCCTCGACCGACTGAGCA
807 GGACCCGACTGATCCCCGACTTGCGCATCCCACCCCTCGACCGACTGAGCA
* *
16632134 CCCGTACGCTCGTTTCATGGGTTGACTTAGGCATACGAATTCATTCCCAGTCTAAGCATACGGAG
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAAATTCATTCCCAGTCTAAGCATACGGAG
* * * * * * *
16632199 TTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTACAATAGCACATGCTAGGCTCGGGCATT
66 TTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTACAACAGCACATGCTAGGCTCGAGCATG
* *
16632264 TGTTGGTGCCACATTTTTCTTCGTCGGGCCCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTT
131 TGTTGGTGCCACATTTTTCTTCGTCGGGCCCATCGTCGGAGAACCTGACCGACGGAATTGGGGTT
** * * * *
16632329 CCGGTGATCGAAGGGGCTGGGGGGTGTGCGTACATGATGTGTGATGGGTGCTGGTACTTGGCCCC
196 CCGGTGATCGAAGGGGCAAGGGGCTGTGCGCACATGATGTGCGAAGGGTGCTGGTACTTGGCCCC
*
16632394 TATATTGGCCCCCTATCCCTCATCAAATCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGAT
261 TATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGAT
* * * * * *
16632459 TTTACTGGTTTGCTGCCAGTAGCCATTAATGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCA
326 TCTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTATCAAATGGGCA
*
16632524 CAAAATCTTGTACAGTTCGAGTTTTTAGCGAAATTTTTTTGTGCATGCCAAAAAAAATAAAAGGA
391 CAAAATCTTGTACACTTCGAGTTTTTAGCGAAATTTTTTTGTGCATGCCAAAAAAAATAAAAGGA
16632589 TAACGTCTACCAAGTTTGGGACCAAAACTGCTTCCGAAAAATTTTAAAAAATCCCGACTCGTAAA
456 TAACGTCTACCAAGTTTGGGACCAAAACTGCTTCCGAAAAATTTTAAAAAATCCCGACTCGTAAA
*
16632654 AAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
521 AAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTT
* * * *
16632719 AAGGGGCCATTATATGAATTTACAAGCCATAAAAATGGCATTGGCAGGCTGAAATATGGAGATGT
586 AAGGGACCATTATATGAATTAACAAGCCATAAAAATGGCATTGGCAGGCAGAAATATGAAGATGT
** * * *
16632784 GCCTAAACCCACCTACCACCCTATCTCTCTGGCTGGCGTA-G-TG-CCCGCCCGCCCACTTGTTT
651 GCCTAAACCCACCTACCACCC-ATCTCTCTAACCGGCGTAGGCTGCCCCGCCCGCCCACTCGTTC
* *
16632846 CGTCGGA-CGGCTTAGGCTTACGGAGTTCATTCCCAGTCTTAGATCAGACCGAAGTGAGGGTTAC
715 CGTC-GATCGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAAGTGAGGGTTAC
* **
16632910 GGCAGCAGGATCCACAGCACGCAGAGGGGGACCCGA-TCGATCCCCGGCTTGCGCATCCTGCCCC
779 GGCAGCAGGATCCACAGCACGCAGAGGGGGACCCGACT-GATCCCCGACTTGCGCATCCCACCCC
* **
16632974 TCTGGCCGGTTGAGCA
843 TC-GACCGACTGAGCA
*
16632990 CCCGCACGCTCGTTTCATGGGTTGA-TTGGGCATACAAAGTTCATTCCCAGTCTAAGCATACGGA
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAAA-TTCATTCCCAGTCTAAGCATACGGA
* * ** *
16633054 GTTCATTCCCAATCTAAGATCAGATCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGAGCAT
65 GTTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTACAACAGCACATGCTAGGCTCGAGCAT
**
16633119 GTGTTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCG
130 GTGTTGGTGCCACATTTTTCTTCGTC-GGGC-CCA---TC---G--T---CGGAGAACCTGACCG
**
16633184 ACGGAATTGGGGTTCCGGTGATCGGGGGGGCCAAGGGGCTGTGCGCACATGATGTGCGAAGGGTG
182 ACGGAATTGGGGTTCCGGTGATCGAAGGGG-CAAGGGGCTGTGCGCACATGATGTGCGAAGGGTG
* *
16633249 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
246 CTGGTACTTGGCCCCTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTA
*
16633314 AGGAGCATTTGAGATTCTACAGGTTTGCTG-CAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
311 AAGAGCATTTGAGATTCTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* * * *
16633378 TTTATCAAATGGGCTCAAAATCTTGTCCACTTCGAGTTTTTAGCTG-AATTTTTTTGTGCTTGCT
376 TTTATCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGC-GAAATTTTTTTGTGCATGCC
* * * * *
16633442 GAAAAAAATAAAAGGATCATGTCTACCATGTTTGGGGCCAAAA-TGCCTTCCGATAAAATTTTAA
440 AAAAAAAATAAAAGGATAACGTCTACCAAGTTTGGGACCAAAACTG-CTTCCGA-AAAATTTTAA
* * *
16633506 AAAATCCTGAAC-CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCATTTTGCCATG
503 AAAATCCCG-ACTCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATG
* * *
16633570 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTAACAAGCCATTAAAATGGTATTGGCA
567 AAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTAACAAGCCATAAAAATGGCATTGGCA
* *
16633635 TGCAGAAATATGAAGATGTGCCTAAACCCACCTACGACCCATCTCTCTAACCGGCGTAGTGCCTG
632 GGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCATCTCTCTAACCGGCGTAG-G-CTG
* * *
16633700 CCCACCCGCCCGTCCGCTCGTTCCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
695 --C-CCCGCCCGCCCACTCGTTCCGTCGATCGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* *
16633765 ATCAGATCGGAGTGAGGGTT
757 ATCAGACCGAAGTGAGGGTT
16633785 GCTTCCAAAA
Statistics
Matches: 2184, Mismatches: 238, Indels: 216
0.83 0.09 0.08
Matches are distributed among these distances:
851 2 0.00
852 4 0.00
853 1 0.00
854 3 0.00
855 130 0.06
856 138 0.06
857 4 0.00
858 3 0.00
859 6 0.00
861 2 0.00
862 2 0.00
863 4 0.00
864 1 0.00
865 3 0.00
866 341 0.16
867 264 0.12
868 6 0.00
869 193 0.09
870 281 0.13
871 14 0.01
873 3 0.00
874 2 0.00
875 2 0.00
876 3 0.00
877 171 0.08
878 1 0.00
880 2 0.00
881 1 0.00
883 1 0.00
884 3 0.00
885 1 0.00
886 7 0.00
887 162 0.07
888 264 0.12
889 43 0.02
890 6 0.00
891 90 0.04
892 1 0.00
896 1 0.00
898 2 0.00
900 1 0.00
903 15 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (857 bp):
CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAAATTCATTCCCAGTCTAAGCATACGGAG
TTCATTCCCAATCTAAGATCAGACCAGACCGAGGGTTACAACAGCACATGCTAGGCTCGAGCATG
TGTTGGTGCCACATTTTTCTTCGTCGGGCCCATCGTCGGAGAACCTGACCGACGGAATTGGGGTT
CCGGTGATCGAAGGGGCAAGGGGCTGTGCGCACATGATGTGCGAAGGGTGCTGGTACTTGGCCCC
TATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGAT
TCTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTATCAAATGGGCA
CAAAATCTTGTACACTTCGAGTTTTTAGCGAAATTTTTTTGTGCATGCCAAAAAAAATAAAAGGA
TAACGTCTACCAAGTTTGGGACCAAAACTGCTTCCGAAAAATTTTAAAAAATCCCGACTCGTAAA
AAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTT
AAGGGACCATTATATGAATTAACAAGCCATAAAAATGGCATTGGCAGGCAGAAATATGAAGATGT
GCCTAAACCCACCTACCACCCATCTCTCTAACCGGCGTAGGCTGCCCCGCCCGCCCACTCGTTCC
GTCGATCGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAAGTGAGGGTTACGG
CAGCAGGATCCACAGCACGCAGAGGGGGACCCGACTGATCCCCGACTTGCGCATCCCACCCCTCG
ACCGACTGAGCA
Found at i:16634256 original size:26 final size:26
Alignment explanation
Indices: 16634220--16634272 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16634210 GTTGACTTAG
16634220 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
16634246 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16634272 G
1 G
16634273 ATCGAACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16636629 original size:26 final size:26
Alignment explanation
Indices: 16636593--16636645 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16636583 GTTGACTTAG
16636593 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16636619 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16636645 G
1 G
16636646 ATCAGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16637529 original size:26 final size:26
Alignment explanation
Indices: 16637493--16637545 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16637483 GTTGACTTAG
*
16637493 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16637519 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16637545 G
1 G
16637546 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16638002 original size:900 final size:895
Alignment explanation
Indices: 16634942--16640926 Score: 6927
Period size: 900 Copynumber: 6.7 Consensus size: 895
16634932 TTTCTTCAAT
* * * * * * **
16634942 GGAGCACCACCGGAGAACCTGACTGGCGGCATTAGGGTTCTGACGATCGGTGCAGCCGGAGGGGT
1 GGAGCATCGCCGGAGAACCTGAC-CGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGT
* *
16635007 GTGCACACATGATGTGCCATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
64 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * *
16635072 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAGAGGTTTGCTACCAATAGCCA
129 AACCTCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
16635137 TTAAAGTGTCTGAAATGGGGACACTTTTTCCAAATGGTCACAAAATTTTGTACACTTCGAGTTTT
194 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
16635202 TAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
259 TAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCCAA
* ** * *
16635267 AACTCCTTCC-AAAAAATTTAAAAAAATCCCAAACCATAAAAAGTTTCCAAAATCATGAAAAATA
324 AACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACC-TAAAAAGTTTCGAAAATCGTGAAAAATA
* * * *
16635331 GAAAACGATTCGTCTTGCCAGGAAACTTCAAGTTAAGGCTTAAGGGACCATTGTATGAATTTACA
388 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * * * *
16635396 AGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCGAAACCCACCTATCAGCCTAT
453 AGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * * * * * * * *** *
16635461 CGATCCATGGCTTGCGCATCCCGTCTCTCTAGCCGGCGTACTACCCGCCTGCCCGTCTTTTTGTT
518 CGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCTGCCCGCTCGTT
* * * *
16635526 TCGTCAGTCGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATGGGACCAGACCGAGGGTTGC
583 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGAGGGTTGC
* * * * *
16635591 GGTAGAAGGATCAGA-AGCACGCAGAGGGGGACCCGATCGATCCCTGGCTTG-GCAAT-GC-TCC
648 GGTAGCAGGATC-GACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGC-ATCCCACCC
* *
16635652 CTCTGGCCGGCTGAGC-CACCGCATGCTTGTTTCGTGGGTTGAC-TAGGCATACGGAGTTCATTA
711 CTCTGGCCGGCTGAGCAC-CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-
* * * * * * *
16635715 AAAGCC-TGTCT-AGCACATGAAGTTCATT-CCAGTCTAA-ATC-GAACGGACCGAGGGTT-CTA
774 ---CCCAT-TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCGA
* * * * *
16635774 AAGCACATGCTGGGCTCGAGCATGTGTTGGTGCGCA-TTTTTTCTT-GTCGGGGCA-CAACG-C
835 CAGCACATGCTGGGCTCG-GCATGTGCTGGTGC-CACCTTTTTCTTCGTC-AGGCACCATCGCC
* * * *
16635834 GGAGCATCGCC-GAGAACCTGA-CGCAGCATTGGGGTTCC-AGCGATC-AGGGGCCCGGGTGGTG
1 GGAGCATCGCCGGAGAACCTGACCGCGGCATTGGGGTTCCGA-CGATCGGGGGGGCCGGGGGGTG
* * * *
16635895 TGCGCACAGGA-GTGCAATGGGTCGCTGGTACTTGG-CCTTATATTGCCCCCCTATTCCC-CACC
65 TGCGCACATGATGTGCGATGGGT-GCTGGTACTTGGCCCTTATATTGGCCCCCTA-TCCCTCATC
*
16635957 AAA-CTCGAGAACTCACA-CCCTCTTAAAGAGCATTTGAAGAATTTTATAGGTTTGCTGCCAGTA
128 AAACCTCGAGAACTCACACCCCT-TTAAAGAGCATTTG-AG-ATTTTACAGGTTTGCTGCCAGTA
*
16636020 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAG
190 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
* * * * *
16636085 TTTTTAGCTGTATTGTTTTATGCATGCCAACAAAAATACGAGGATCACGTCTACCAAGTTTGCG-
255 TTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTG-GT
* * * * *
16636149 GCCAAAACTCCATCCGAAAAAATTTTAAAAGATCCAGAACCGTAAAAAGTTTTGAAAATCATGAA
319 GCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACC-TAAAAAGTTTCGAAAATCGTGAA
**
16636214 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAAGACCATTGTATGAAT
383 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
* * * *
16636279 TTACAAGCAATAAAAATGGCATTGGCATGCAGAAATATGAAGAAGTGGCTAAACCCACCTACCAC
448 TTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * ** * *
16636344 CCTATCGATCCAGGGCTTGTGCATCTCGTCTCTCTAGATGGCGTAGTGCCCGCCCACCCGTCTGC
513 CCTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG----CCCGCCTGC
* * * * * ** *
16636409 CTGCTCGTTTCATTGGTGGGCTTAGGCATAAGGAGTTCATTCCCAGTCT-AGATT-AGACTGGAT
574 CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGA-ACCAGAC
* ** * * * * *
16636472 TGAGGGTTGCGCCAGCAGGATCGGCAGCACGCAAAAGGGAACCCGACCGATCCCCCGACTTGCGC
638 CGAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGAT-CCCCGGCTTGCGC
* * * * * * *
16636537 ATCTCGCCCCTCTGGCCGACAGAGCACCTGCACGCTTGTTTCGTAGGTTGACTTAGGCATACGGA
702 ATCCCACCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA
* * *
16636602 GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGCTTG
767 GTTCATTCCCATTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTG
* * * * *** * *
16636667 CGGCAGCACATGCTAGGCTCGGGCAAGTGTTGGTGCCGTATTTTTCTTTGTCAGGGCATCATCGC
832 CGACAGCACATGCTGGGCTC-GGCATGTGCTGGTGCCACCTTTTTCTTCGTCA-GGCACCATCGC
16636732 C
895 C
* * ** * * *
16636733 AGG-GCATCGCCGGAGAACCTAACCGGCGACATTAAGGTTTCGATGATCGGGGGGACCGGGGGG-
1 -GGAGCATCGCCGGAGAACCTGACC-GCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGT
*
16636796 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTCTATTGGCCCCCTATCCCTCATCA
64 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
16636861 AACCTCGTGAACTCACA-CCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCGGCCAGTAGCC
129 AACCTCGAGAACTCACACCCCT-TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
* * *
16636925 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGTTCACAAAATCTTGTACGCTTCAAGTTT
193 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * **
16636990 TTAGCTGAATATTTTTGTGCATGTCAAAAAAAATACAAGGATCACGTCTACCAAGTTT-GTGGAA
258 TTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGT-GCC
* * *
16637054 AAAACTCCTTCCAAAAAAAATTTTAAAAAATCAC-GAACTGCAAAAAAGTTTCAAAAATCGTGAA
322 AAAACTCCTTCC-GAAAAAATTTTAAAAAATC-CTGAAC--CTAAAAAGTTTCGAAAATCGTGAA
*
16637118 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAAT
383 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
* * *
16637183 TTACAGGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCAC
448 TTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
*
16637248 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCTGCCCGC
513 CCTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCTGCCCGC
* * *
16637313 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGATCGAGG
578 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGAGG
* * *
16637378 GTTGCGGTAGTAGGATCGACAGTACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCA
643 GTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCA
*
16637443 CCCCTCTGGCTGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
708 CCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* * *
16637508 TCCCATTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTACGACAA
773 TCCCATTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCGACAG
* *
16637573 CACATACTGGGCTCAGGCATGTGCTGGTGCCACCTTTTTCTTCGTCGAGGCACCATCGTC
838 CACATGCTGGGCTC-GGCATGTGCTGGTGCCACCTTTTTCTTCGTC-AGGCACCATCGCC
* * * ** *
16637633 GGAGCATCGCGCGGAGAACCTGACCAGCAGCAGTAGGGTTCTAACGATCGGGGGGGCCAGGGGGT
1 GGAGCATCGC-CGGAGAACCTGACC-GCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGT
* *
16637698 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCACCATATCCCTCATCA
64 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * *
16637763 AACCTC-AGGAACTCACACCCCTTTAAAGAGCATTTGAGATGTTGCAGTTTTGCTACCCAGTAGC
129 AACCTCGA-GAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCT-GCCAGTAGC
* *
16637827 CATTAAAGTGGCTGAAATGGGGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTT
192 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
* * *
16637892 TTTAGCTGAATTTTTTTGTGCATGCGAAAAAAAATACAAGGATCACATCTACCAAGTTTGGTGCA
257 TTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCC
* * * *
16637957 AAAACTCCTTCCGAAAAAATTTTAAAACATCCTGAACCCAAAAAGTTTCGAAAATCGTGTAAAAG
322 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCTAAAAAGTTTCGAAAATCGTGAAAAAT
* *
16638022 AGAAAACGAGTCGTCTTGCCATAAAACTTCACGTTAAGGCTTAAGGGACCATTGTATGAATTTAC
387 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* * * * *
16638087 AAGCCATAAAAATGGCTTTGGGACACAGAAATATGAAGATGTGCCTGAACCCACTTACCACCCTA
452 AAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * *
16638152 -CGGATCCACGGCTTATGCATCCCGTCTCTCTGGCTGACGTAGTGTCCGCCCGCCTGCCCGCTCG
517 TC-GATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCTGCCCGCTCG
* * * * * *
16638216 TTTTGTCAGTTGGCTTAGGCATACGGAGTTCACTCCCAGTCTAAGATCGAATCAGATCGAGGG-T
581 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGAGGGTT
*
16638280 ----T-----G-T-----G---GCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCACCC
646 GCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCC
* ** ** * *
16638327 CTCTGGCCTGCTGAGCGTCCATACGTTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCC
711 CTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * *
16638392 TAGTCTAAGCATACAGAGTTCCTTCCAAGTCTAAGATC-GAACCGGATCGAGGGTTGCGACAGCA
776 CATTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGATCGAGGGTTGCGACAGCA
* * * * **
16638456 CATGCTGGGCTCGGGCATGTGCTGGAGCTACCTATTTCTTCATCAGGGCACCATCATC
840 CATGCTGGGCTC-GGCATGTGCTGGTGCCACCTTTTTCTTCGTCA-GGCACCATCGCC
*
16638514 GGAGCATCGCCAGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGCGGGGCCGGGGGGG
1 GGAGCATCGCCGGAGAACCTGACC-GCGGCATTGGGGTTCCGACGATCGGG-GGGGCC-GGGGGG
16638579 ATGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
63 -TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
*
16638644 CAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
127 CAAACCTCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
* * * *
16638709 CATTAAAGTGTCTAAAATGGGGACAGTTTTTTTAAATGGTCACAAAATCTTGTACACTTGGAGTT
192 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
* * * *
16638774 TTTAGCTGAATTTTTTTGTGCATACAAAAAAAAATACAAGAATCATGTCTACCAAGTTTAGG-GC
257 TTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT-GGTGC
* * * *
16638838 CAAAATTCCTTCCGAAAAAATTTTAAAAAAT-TTCGAACCGTAAAAAGTTTCAAAAATCGTAAAA
321 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCT-GAACC-TAAAAAGTTTCGAAAATCGTGAAA
16638902 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
384 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
** *
16638967 TACAAGCCATAAAAATGGCATTGGCATATTGAAATATGAAGATGTGCCTAAACCCACATACCACC
449 TACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * * *
16639032 CTATCGATCCATGGCTTGTGCATCCCGTCTCTTTGGTCGGCGTAGTGCCCCCCGCACGCCCGCCC
514 CTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTG---CCCGCCCGCCTGCCC
* * * *
16639097 GCTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCGAACCAGACCGA
576 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGA
* ** *
16639162 GGGTTGTGGTAGCAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCC
641 GGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCC
* * * * ** *
16639227 CGCCCCTCTGGCCGGCTGAGCGCGCGCACGTTTTTTTCGTTGGTTGACTTAGGCATACGGAGTTC
706 CACCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
* * * **
16639292 ATTCCCATTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCGGATCGGA-CTGAGGGTTGTAA
771 ATTCCCATTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATC-GAGGGTTGCGA
* * * * * *
16639356 CAGCACATGCTGGGCTCGAGCATGTTCGGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
835 CAGCACATGCTGGGCTCG-GCATGTGCTGGTGCCACCTTTTTCTTCGTC-AGGCACCATCGCC
** * * * *
16639419 GGAGCATCGTTGGAGAACCTGACCGACGGCGTTGGGGTTCCGGCGATCAGGGGGGTCGGGGGGGT
1 GGAGCATCGCCGGAGAACCTGACCG-CGGCATTGGGGTTCCGACGATC-GGGGGGGCCGGGGGG-
* * * *
16639484 TGTGCGCATATGA-ATACGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
63 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
16639548 AAACCTCGAGAACTCACACACCC-TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
128 AAACCTCGAGAACTCACAC-CCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
**
16639612 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAACAGTCACAAAATCTTGTACACTTCGAGTT
192 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
* *
16639677 TTTAGCTGAATTTTTTTGTGCATGCGAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCA
257 TTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCC
* * *
16639742 AAAACTCCTTCCGAAAAAATTTTAAAACATCCTGAACCCAAAAAGTTTCGAAAATCGTGAAAAAG
322 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCTAAAAAGTTTCGAAAATCGTGAAAAAT
* * **
16639807 AGAAAACGAGTCGTCTTGCCATAAAACTTCACGTTAAGGCTTAATTGACCATTGTATGAATTTAC
387 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* * * *
16639872 AAGCCATAAAAATGGCATTGGGACACAG-AATATGAAGATGTGCCTGAACCCACTTACCACCCTA
452 AAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* *
16639936 -CGGATCCACGGCTTATGCATCCCGTCTCTCTGGCCGACGTAGTGTCCGCCCGCCTGCCCGCTCG
517 TC-GATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCTGCCCGCTCG
* * * * *
16640000 TTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAATATAAGATCGAATCAGACCGAGGGTT
581 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGAGGGTT
* * * *
16640065 GTGGTAGCAGGATTGACAGCACGCAGAGGGGGACCCGATCGATCCCCGG-TT-TGCAT-CCA-CC
646 GCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCC
* * * * * * * *
16640126 CTTTTG-TGACTGAGCATCCGTACGCTCGTTT--T--G-TGACATT-GGCAAACAGAGTTCATT-
711 CTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGAC-TTAGGCATACGGAGTTCATTC
* * * ** * * ** * *
16640183 ---TTCTAAGTAT-CAGAGTTTCCTTCAAAGTCT---ATTAAACTAGTTCTTGAGGGTTACGA-A
775 CCATTCTAAGCATACGGAG-TTCATTCCCAGTCTAAGATCAGACCGGATC--GAGGGTTGCGACA
** * * * * * *
16640240 GCACATGC--CACTC-GCAT-TGCTGGAGCTACC-TATTC-TC--CATGCAGCATCACC
837 GCACATGCTGGGCTCGGCATGTGCTGGTGCCACCTTTTTCTTCGTCAGGCACCATCGCC
*
16640291 -AAGCATCG-C--AGAACCTGACCGACGGCATTGGGGTTCCGA-GAT--GGGGGGCCGGGGGGAT
1 GGAGCATCGCCGGAGAACCTGACCG-CGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGG-T
** *
16640349 GTG-GCACATGATGCCCAGATGTGGTGCTGGTACTTGG-CCTT-TCATT-----CCTATCGCTCA
64 GTGCGCACATGATGTGC-GATG-GGTGCTGGTACTTGGCCCTTAT-ATTGGCCCCCTATCCCTCA
* * * *
16640406 TCAAAGCTCGAGAA-TCACACTCCC---AAAGAGCATTTG-GATCTTACA--ATT-C--CTA-TA
126 TCAAACCTCGAGAACTCACAC-CCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
*
16640460 G-CATT-AAGTGTCTGAAACTTGGGG-CACTTTTTTCAAATGGTCAC-AAATC-TGTACA-TTTG
190 GCCATTAAAGTGTCTGAAA--TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCG
16640519 AGTTTTTAGCTGAATTTTTTTGTGCAATGCCCAAACAAAAATACAAAGGATCACGTCTACCAAGT
253 AGTTTTTAGCTGAATTTTTTTGTGC-ATG-CCAAA-AAAAATAC-AAGGATCACGTCTACCAAGT
* * * * ** *
16640584 TTGGGGCCAAAACTTCTTCCAAAAAAATTTTAAAAAATCCCGAACAGAAAAAAGTTTTGAAAATC
314 TTGGTGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAAC-CTAAAAAGTTTCGAAAATC
*
16640649 GTGAAAAATAGAAAACGGGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
378 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* * *
16640714 TGAATTTACAAGCCATAAAAATCGCATTGGC-TCGCAGAAATATGTAGATGTGCCTAAACCCACC
443 TGAATTTACAAGCCATAAAAATGGCATTGGCAT-ACAGAAATATGAAGATGTGCCTAAACCCACC
* * * * * * *
16640778 TACCACCCTATCGATCCACGACTTGCGCATCTCGTCTCTCTAGCCGAGGTAGTGCCTGCCC-ACT
507 TACCACCCTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCT
* * * * *
16640842 ---CGCTCGTTCCGTCGATTGGCTTAGGCATACAGAGTTCATTCTCAATCTAAGATTGAACCAGA
572 GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGA
* *
16640904 CCGAGGCTTGC-GCAGCAGGATCG
637 CCGAGGGTTGCGGTAGCAGGATCG
16640927 GCATCGCCGG
Statistics
Matches: 4421, Mismatches: 552, Indels: 285
0.84 0.10 0.05
Matches are distributed among these distances:
846 28 0.01
847 19 0.00
848 84 0.02
849 30 0.01
850 67 0.02
851 111 0.03
852 74 0.02
853 2 0.00
854 2 0.00
856 8 0.00
857 12 0.00
859 9 0.00
860 23 0.01
863 7 0.00
864 18 0.00
865 11 0.00
866 14 0.00
867 3 0.00
868 28 0.01
871 7 0.00
872 9 0.00
873 1 0.00
875 2 0.00
876 4 0.00
877 6 0.00
878 4 0.00
880 39 0.01
881 222 0.05
882 171 0.04
883 306 0.07
884 25 0.01
885 28 0.01
886 107 0.02
887 186 0.04
888 228 0.05
889 22 0.00
890 2 0.00
891 65 0.01
892 79 0.02
893 28 0.01
894 47 0.01
895 38 0.01
896 42 0.01
897 11 0.00
898 125 0.03
899 13 0.00
900 509 0.12
901 167 0.04
902 427 0.10
903 465 0.11
904 246 0.06
905 236 0.05
906 4 0.00
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.25
Consensus pattern (895 bp):
GGAGCATCGCCGGAGAACCTGACCGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGT
GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
CCTCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGTGCCAAAA
CTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCTAAAAAGTTTCGAAAATCGTGAAAAATAGAA
AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
CATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
TCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCTGCCCGCTCGTTTCG
TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCAGACCGAGGGTTGCGGT
AGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTG
GCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCATTC
TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCGACAGCACATGCT
GGGCTCGGCATGTGCTGGTGCCACCTTTTTCTTCGTCAGGCACCATCGCC
Found at i:16638404 original size:26 final size:26
Alignment explanation
Indices: 16638374--16638426 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16638364 GTTGACTTAG
*
16638374 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
*
16638400 GCATACAGAGTTCCTTCCAAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
16638426 G
1 G
16638427 ATCGAACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCAAGTCTAA
Found at i:16639315 original size:26 final size:26
Alignment explanation
Indices: 16639279--16639331 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16639269 GTTGACTTAG
*
16639279 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16639305 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16639331 G
1 G
16639332 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:16641723 original size:26 final size:26
Alignment explanation
Indices: 16641693--16641743 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16641683 TGACTTAGGT
16641693 ATACGGAGTTCATTCCCAGTCTAAGC
1 ATACGGAGTTCATTCCCAGTCTAAGC
*
16641719 ATACGGAGTTCGTTCCCAGTCTAAG
1 ATACGGAGTTCATTCCCAGTCTAAG
16641744 ATCAAACCGG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.25, G:0.22, T:0.27
Consensus pattern (26 bp):
ATACGGAGTTCATTCCCAGTCTAAGC
Found at i:16642621 original size:26 final size:26
Alignment explanation
Indices: 16642579--16642631 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
16642569 GTTGACTTAG
* *
16642579 GCATACGGAGTCAATTCTCAGTCTAA
1 GCATACGGAGTCAATTCCCAATCTAA
16642605 GCATACGGAGTTC-ATTCCCAATCTAA
1 GCATACGGAG-TCAATTCCCAATCTAA
16642631 G
1 G
16642632 ATCGGATCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 22 0.92
27 2 0.08
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTCAATTCCCAATCTAA
Found at i:16643105 original size:894 final size:898
Alignment explanation
Indices: 16640926--16643231 Score: 3322
Period size: 897 Copynumber: 2.6 Consensus size: 898
16640916 CAGCAGGATC
* * *
16640926 GGCATCGCCGGAGAACCTGACCGACGGCATTGGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTG
1 GGCATCGCCGGAGAACCTGACTGACGGCATT-AGGGTTCTGGCGATCGGGGGGGCC-GGGGGGTG
* *
16640991 TGCGTACATGATGTGCGATGGGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCACATC
64 TGCGCACATGATGTGCGAT--GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
* *
16641056 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCCGCCAGTAACC
127 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
16641121 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
192 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* *
16641186 TTAGCTGAATTTCTTTGCGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
257 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* *
16641251 AAACTCCTTCC-AAAAAATTTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAATCGTGAAAAA
322 AAACTCCTTCCGAAAAAA-TTTTAAAAAATCCCGAACCACAAAAAGTTTAAAAAATCGTGAAAAA
* * *
16641315 TAGGAAATGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
386 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * * * **
16641380 CAAGCCATAAAAATGGTATTGGCATGGAGAAATATGATGATGTGATTAAACCCACCTACCACCCT
451 CAAGCCATAAAAATGGCATTGACATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * *
16641445 ATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCTG
516 ATCAATCCACGGCTTGCACATCCCGTCTCTCTAGCCGACGTAGT---CGCCCGCCCG--CGCCTG
* *
16641510 CTCGTTTCGTCGATTGGCTTTGGCATACGGAGTTCATTCCCAGTCTAAGATCGTATCAGACTGAG
576 CTCGTTTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGTATCAGACTGAG
* * * **
16641575 GGTTATGGCAGCAGGATCAACAGCACGCAGAGGGGGACCTGGTCGATCCCCGGCTTGCGCATCCT
641 GGTTACGGCAGCAGGATCAACAGCACGCAGAGGGGGACCCGATCGATCCCCAACTTGCGCATCCT
* * * *
16641640 GCCACTCTGGTCGGCTGAGCACCCACACGCTCGTTTCATGGTTTGACTTAGGTATACGGAGTTCA
706 GCCACTCTGGCCAGCTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCA
* * * *
16641705 TTCCCAGTCTAAGCATACGGAGTTCGTTCCCAGTCTAAGATCAAACCGGATCGATGGTTGCGGAA
771 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCAAACCGGACCGAGGGTTGCGGAA
* * * * *
16641770 GCACATACTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGCCGGGGCACCGTCGTCAG
836 GCACATACTGGGCTCGAGCATGTGCTGGTGTCGCATTTTTCTTCACCAGGGCACCATCGACAG
* * * **
16641833 GGCATTGCCGGAAAACCTAACT-AGCGGCATTTTGGTTCTGGCGATCGGGGGGGCCGTGGGGGTG
1 GGCATCGCCGGAGAACCTGACTGA-CGGCATTAGGGTTCTGGCGATCGGGGGGGCCG-GGGGGTG
* * *
16641897 TGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTACCCCTTATCAA
64 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
16641962 ACCTCGAG-----A-A-CCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCGT
129 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* ** *
16642020 TAAAGTGTCTGAAATAGGGACACTTTTTTCAAATAATCACAATATCTTGTACACTTCGAGTTTTT
194 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* *
16642085 AGCTGAATTTTTTTGTGCATGCCATCAAAAATACAAGGATCACGTCTACCAAGTTTGGGACCAAA
259 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * ** **
16642150 AATCCTTCTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAG
324 ACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCACAAAAAGTTTAAAAAATCGTGAAAAATAG
* * *
16642215 AAAACAAGTCGTCTTGCCATGCAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATGTACAA
389 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
**
16642280 GCCATAAAAATGGCATTGACACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
454 GCCATAAAAATGGCATTGACATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* *
16642345 GATCCACGGCTTGCACATCCCGTCTCTCTAGCCGACGTAGT-GCCCGCCCG-TCC-GCTCGTTTC
519 AATCCACGGCTTGCACATCCCGTCTCTCTAGCCGACGTAGTCGCCCGCCCGCGCCTGCTCGTTTC
* * * *
16642407 GTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAG-ATCGGACTGATGGTTGCG
584 GTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATC-GTATCAGACTGAGGGTTACG
* * * * *
16642471 GCAGTAGGATCGACATCATGCAGAGGGGGACCCGATTGATCCCCAACTTGCGCAT-CTCGCC-CT
648 GCAGCAGGATCAACAGCACGCAGAGGGGGACCCGATCGATCCCCAACTTGCGCATCCT-GCCAC-
* * * *
16642534 TCTGGCCAG-TGAGCACCCGCACGTTCGTTTCGTGGGTTGACTTAGGCATACGGAG-TCAATTCT
711 TCTGGCCAGCTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTC-ATTCC
** * *
16642597 CAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCAC
775 CAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCAAACCGGACCGAGGGTTGCGGAAGCAC
* * *
16642662 ATGCTGGGCTTGAGCATGTGCTGGTGTCGCATTTTTCTTCACCAGGGCACCATC-ACCG
840 ATACTGGGCTCGAGCATGTGCTGGTGTCGCATTTTTCTTCACCAGGGCACCATCGACAG
* * *
16642720 GAGCATCACCGGAGAACCTGACTGACGGCATTAGGGTTCTGGCGATCGGGGAGGTCGGGGGGTGT
1 G-GCATCGCCGGAGAACCTGACTGACGGCATTAGGGTTCTGGCGATCGGGGGGGCCGGGGGGTGT
* *
16642785 GCGCACAGGATGTGCGATGGGTGCTGGTACTTGGCACTTATATTGGCCCCCTATCCCTCATCAAA
65 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
*
16642850 CCTCGAGAACTCACACCCCCTTAAAGAGCATTGTG-GATTTTACAGGTTTGCTGTCAGTAGCCAT
130 CCTCGAGAACTCACACCCCCTTAAAGAGCATT-TGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
16642914 TAAAGTGTCTGAAATGGGGACACTTTTTCCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTT
194 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
*
16642979 AG-TCGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
259 AGCT-GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* ** *
16643043 AACTCCATCCGAAAAAATTTTAAAAAATCTTGAACCACAAAAAGTTTAAAAAATCATGAAAAATA
323 AACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCACAAAAAGTTTAAAAAATCGTGAAAAATA
* *
16643108 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA-GGACCGTTGTATGGATTTACA
388 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
*
16643172 AGCCATAAAAATGGCATCGACATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
453 AGCCATAAAAATGGCATTGACATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
16643232 TCTAAGATCG
Statistics
Matches: 1248, Mismatches: 133, Indels: 50
0.87 0.09 0.03
Matches are distributed among these distances:
887 80 0.06
888 198 0.16
889 121 0.10
890 3 0.00
892 1 0.00
893 86 0.07
894 256 0.21
895 2 0.00
897 370 0.30
898 7 0.01
899 1 0.00
904 51 0.04
905 1 0.00
906 46 0.04
907 25 0.02
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.25
Consensus pattern (898 bp):
GGCATCGCCGGAGAACCTGACTGACGGCATTAGGGTTCTGGCGATCGGGGGGGCCGGGGGGTGTG
CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
TCCTTCCGAAAAAATTTTAAAAAATCCCGAACCACAAAAAGTTTAAAAAATCGTGAAAAATAGAA
AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
CATAAAAATGGCATTGACATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAA
TCCACGGCTTGCACATCCCGTCTCTCTAGCCGACGTAGTCGCCCGCCCGCGCCTGCTCGTTTCGT
CGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGTATCAGACTGAGGGTTACGGCA
GCAGGATCAACAGCACGCAGAGGGGGACCCGATCGATCCCCAACTTGCGCATCCTGCCACTCTGG
CCAGCTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
AAGCATACGGAGTTCATTCCCAATCTAAGATCAAACCGGACCGAGGGTTGCGGAAGCACATACTG
GGCTCGAGCATGTGCTGGTGTCGCATTTTTCTTCACCAGGGCACCATCGACAG
Found at i:16643406 original size:26 final size:26
Alignment explanation
Indices: 16643370--16643422 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16643360 GTTGACTTAG
* * *
16643370 GCATGCGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16643396 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16643422 G
1 G
16643423 ATTGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:16644771 original size:714 final size:716
Alignment explanation
Indices: 16643396--16644876 Score: 2342
Period size: 714 Copynumber: 2.1 Consensus size: 716
16643386 CTCAGTCTAA
**
16643396 GCATACGGAGTTCATTCCCAATCTAAGATTGGACCGGACCGAGGGTTGCGGCAGCACATACTGGC
1 GCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATACTGGC
** *
16643461 CTTGAGCATGTGCTGGTGCCGCATTTTTCTTTGTCGGGGCACCAACACCGGAGCATCGCCGGAGA
66 CTTGAGCATGTGCTGGTGCCGCATTTTTCTTTACCGGGGCACCAACACCAGAGCATCGCCGGAGA
* * * *
16643526 ACCTGACCGGCGGCATTGGGGTTCTGGCGATCGGGGAGGCCGGCGGGGTGTGCGCACATGATGTG
131 ACCTGACCGGCAGCATTGGGGTTCCGACGATCGGGGAGGCCGGCGGGGTGTGCACACATGATGTG
16643591 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
16643656 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
261 ACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTAAAAT
*
16643721 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTGCGAGTTTTTAGCTGAATTTTTTTA
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAAACTGCGAGTTTTTAGCTGAATTTTTTTA
* *
16643786 TGCATGCTAACAAAAATGCAAGGATCACGTCTACCAAGTTTGGGACTAAAACTCCTTCCGAAAAA
391 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACTAAAACTCCTTCCGAAAAA
* * *
16643851 ATTTTAAAAAATCCCGAACCCTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTT
456 ATTATAAAAAATCCCGAACCCTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCATCTT
* * *
16643916 GCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
521 GCCATAAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
16643981 TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTATCGCCCTATCGATCCACGGCTTGCG
586 TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
16644046 CATCACGTCTCTTTGGCCGACGTAGTGCCCGCTCGCCCG-CCCGCTCGTTTCATCGGTTGGCTTA
651 CATCACGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCGCTCATTTCATCGGTTGGCTTA
16644110 C
716 C
* *
16644111 GCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATACTGGC
* * * **
16644176 CTTGGGCATGTGCTGGTGCCGTATTTTTCTTTACCGGGGCACCATCGTCAGAGCATCGCCGGAGA
66 CTTGAGCATGTGCTGGTGCCGCATTTTTCTTTACCGGGGCACCAACACCAGAGCATCGCCGGAGA
* * *
16644241 ACCTGACTGGCAGCATTGGGGTTCCGATGATCGGGTG-GGCTGG-GGGGTGTGCACACATGATGT
131 ACCTGACCGGCAGCATTGGGGTTCCGACGATCGGG-GAGGCCGGCGGGGTGTGCACACATGATGT
*
16644304 GCGATGGGTGCTGGTACTTGGCCCTTATATTGTCCCCCTATCCCTCATCAAACCTCGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
16644369 CACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAATGTCTAAAA
260 CACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTAAAA
* *
16644434 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAAACTTCGATTTTTTAGCTGAATTTTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAAACTGCGAGTTTTTAGCTGAATTTTTTT
* * * * * *
16644499 GTGCATGCCAACACAAGTACAAGGATCACGTCTACCAAGTTTGGGGC-AACAACTGCTTCTGAAA
390 ATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACTAA-AACTCCTTCCGAAA
* ** * *
16644563 AAATTATAAAAAATCCCGAACTGC-AAAAAGTTTTGAAAATCATGAAAAATAGGAAACAAGTCGT
454 AAATTATAAAAAATCCCGAAC-CCTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCAT
16644627 CTTGCCATAAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
518 CTTGCCATAAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
*
16644692 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
583 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* *
16644757 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCACCCGCTCATTTCGTCGGTT
648 GCGCATCACGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG--C-CCCGCTCATTTCATCGGTT
*
16644822 GGCTTAG
710 GGCTTAC
* * * * *
16644829 GCATAGGGAGTTCATTGCCAGTGTAAGATCAAACCGGACCGAGGGTTG
1 GCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTG
16644877 TTGTAGCAGG
Statistics
Matches: 700, Mismatches: 59, Indels: 11
0.91 0.08 0.01
Matches are distributed among these distances:
713 2 0.00
714 477 0.68
715 154 0.22
716 1 0.00
718 66 0.09
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.26
Consensus pattern (716 bp):
GCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATACTGGC
CTTGAGCATGTGCTGGTGCCGCATTTTTCTTTACCGGGGCACCAACACCAGAGCATCGCCGGAGA
ACCTGACCGGCAGCATTGGGGTTCCGACGATCGGGGAGGCCGGCGGGGTGTGCACACATGATGTG
CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTAAAAT
GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAAACTGCGAGTTTTTAGCTGAATTTTTTTA
TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACTAAAACTCCTTCCGAAAAA
ATTATAAAAAATCCCGAACCCTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCATCTT
GCCATAAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
CATCACGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCGCTCATTTCATCGGTTGGCTTA
C
Found at i:16645017 original size:26 final size:26
Alignment explanation
Indices: 16644988--16645039 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16644978 GTTGACTTAG
*
16644988 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16645014 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
16645040 TATCGGACTG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:16646237 original size:26 final size:26
Alignment explanation
Indices: 16646198--16646250 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16646188 GTTCACTTAG
*
16646198 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAATTCATTCCCAGTCTAA
16646224 GCATACGGAATTCATTCCCAGTCTAA
1 GCATACGGAATTCATTCCCAGTCTAA
16646250 G
1 G
16646251 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAATTCATTCCCAGTCTAA
Found at i:16647124 original size:26 final size:26
Alignment explanation
Indices: 16647088--16647140 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16647078 GTTAGCTTAG
16647088 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16647114 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16647140 G
1 G
16647141 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16648010 original size:25 final size:26
Alignment explanation
Indices: 16647975--16648026 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
16647965 GTTGACTTAG
*
16647975 GCATACAGAGTTCATT-CCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
*
16648000 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
16648026 G
1 G
16648027 ATCAGACCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 15 0.62
26 9 0.38
ACGTcount: A:0.31, C:0.25, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:16648396 original size:886 final size:874
Alignment explanation
Indices: 16646110--16649003 Score: 3783
Period size: 890 Copynumber: 3.3 Consensus size: 874
16646100 GACAGCATGT
* ** * * * *
16646110 AGAGGGGGACCTGGCCGATCCCCGACTTGCGCATTCCGCCCCTCTGGCCGGTTGAGTGCCCGCAC
1 AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
* *
16646175 GCTCATTTCGTGGGTTCACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAATTCATT
66 GCTCGTTTCGTGGGTTCACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* * * ** ****
16646240 CCCAGTCTAAGATCGGACCGGACCGAGGGTGGCGGTAATGGATGCTGGGCTCGGGCATGTGCTGG
131 CCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGG
* * * *
16646305 TGCCAGATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCATCGGAGAACCTGACTGGCGGCAT
196 TGCCATATTTTTCTTCGTCGGGGCACCA---T-----CA-C--CGGAGAACCTGACCGACGGCAT
* * * * * *
16646370 TGGGTTCCGGCGATCGGGGGG-GCCGGGGGTTGTGCGCATATCATGGGCGATGGGTTCTGGTACT
250 TGGGTTCCGGCCATCGGGGGGAG--GGGGG-TGTGCGCACATGATGTGCGATGTGTGCTGGTACT
* * *
16646434 TAGCCTTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCAT
312 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
*
16646499 TTGAGATTTTGCAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
377 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT-GGGACACTTTTTTCAA
* * * *
16646564 ATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACGAAAAT
441 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCACGCCAACAAAAAT
* * * * *
16646629 TCAAGGATCATGTCTACCAAGTTTGGGGCTAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCC-
506 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTTCAAAAAAATTTTAAAAAATC-CCG
* *
16646693 AACCGCAAAAACATTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
570 AACCG--AAAA-GTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATG
* *
16646758 TGAAGGCTTAAGGGACTATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATA
632 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATA
* * * *
16646823 TGAAGATGTGCCTAAACCCTA-CTACCACCCTATTGATCCAAGGCTTGTGCATCCCGTTTCTCTG
697 TGAAGATGTGCCTAAACCC-ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* * * * *
16646887 GCCGGCGTAGTGCCTGCCCGCCTGCCCGTCCGCTCATTTCCTCGTA-TGGCTTAGGTATACGGAG
761 GCCGGCGTAGTGCCCGCCCGCC--CCC-T--GCTCGTTTCGTC-AACTGGCTTAGGCATACGGAG
*
16646951 TTCATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGCGA-C-AGCA-CG-T----
820 TTCATTCCCAGTCTAAGATCAGACAG-ACTGAGGGTTGCGAGCAAG-ATCGCTACAC
** * * * * * * * *
16647000 AGAGGATGACCCGGTCGATACCCGGCTTGCACATCCTGACCTTCTGGCCGGCAGAGCGCCCACAC
1 AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
*
16647065 GCTCGTTTCGTGGGTT-AGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTTAT
66 GCTCGTTTCGTGGGTTCA-CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCAT
* *
16647129 TCCCAGTCTAAGATCAGACCAGACCAAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTG
130 TCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTG
* * *
16647194 GTGCCATATTTTTCTTCGCCGGGGCACCATCCCCGGAGAACCTGACCGACGGCATTGGGGTTCCA
195 GTGCCATATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACCGACGGCATT-GGGTTCCG
*
16647259 GCCATCGGGGGGACGGGGGAGTGTGCGCACATGATGTGCGATGTGTGATGGTACTTGGCCCTTAT
259 GCCATCGGGGGGA-GGGGG-GTGTGCGCACATGATGTGCGATGTGTGCTGGTACTTGGCCCTTAT
* *
16647324 ATTGGCCCCTTATCCCTCATCAAACCTCGATAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
322 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
*
16647389 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGG-CACTTTTTTCAAATGGTCACGA
387 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT-GGGACACTTTTTTCAAATGGTCACAA
** *
16647453 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCACATCGACAAAAATACAAGGATCA
451 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCACGCCAACAAAAATACAAGGATCA
* *
16647518 CATCTACCAAGTTTGGGGCCAAAATTCCTTTCAAAAAAATTTTAAAAAATCCCGAACCGTTAAAA
516 CGTCTACCAAGTTTGGGGCCAAAAATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCG--AAAA
*
16647583 GTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAA
579 GTTT-GAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAA
* * *
16647648 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAAATGTAC
643 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
16647713 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
708 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
** * *
16647778 CCCGCCCGCCCACCTGCTCGTTTCGTCAACTGGCTTAGGCATACGGAGTTCATTCGTAGCCTATG
773 CCCGCCCGCCC-CCTGCTCGTTTCGTCAACTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
*
16647843 ATCAGATCAGACTGATGGTTGCAGTAGCAAGATCGCTAGCACAC
837 ATCAGA-CAGACTGAGGGTTGC-G-AGCAAGATCGCT---ACAC
* * *
16647887 AGAGGGGGATCCGATCGATCCCCGGCTTGTGCATCCCGCCCCTCTGCCCGGCTGAAG-GCCCGCA
1 AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG-AGCGCCCGCA
* * * *
16647951 CGCTTGTTTTGTGGGTTGACTTAGGCATACAGAGTTCATT-CCAGTCTAAGCATACGGAGTTCAT
65 CGCTCGTTTCGTGGGTTCACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCAT
* *
16648015 TCCCAATCTAAGATCAGACCGGACCAAGGGTTGCGACAGCACATGCTGGGCTCGGGTATGTGCTG
130 TCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTG
*
16648080 GTGCCATATTTTTCTTCGTCGAGGCACCATCACCGGAGAACCTGACCGACGGCATTGAGGTTCCG
195 GTGCCATATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACCGACGGCATTG-GGTTCCG
* *
16648145 GCCATCGGGGCGGAGGGGGGTGTGCGTACATGATGTGCGATGTGTGCTGGTAGTTGGCCCTTATA
259 GCCATCGGGG-GGAGGGGGGTGTGCGCACATGATGTGCGATGTGTGCTGGTACTTGGCCCTTATA
*
16648210 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTAAAAGAGCATTTGAGATTTTA
323 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * *
16648275 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGTACACTTTTTTCAAATAGTCTCAAA
388 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG-ACACTTTTTTCAAATGGTCACAAA
* * *
16648340 ACCTTGTACACTTCGAGTTTTTAACTGAATTTTTTTTTGCACGCCAACAAAAATACAAAGATCAC
452 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCACGCCAACAAAAATACAAGGATCAC
* * *
16648405 GTCTACCAAGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCCTGAATCACAGAAAG
517 GTCTACCAAGTTTGGGGCCAAAAATCCTTTCAAAAAAATTTTAAAAAATCCCGAA-C-C-GAAAA
**
16648470 GTTTGAAAATTATGAAAAATAGAAAACGAGTTCGTCTTGCCCATTGAAAACTTCATGTGAAGGCT
579 GTTTGAAAATCGTGAAAAATAGAAAACGAG-TCGTCTTG-CCA-TG-AAACTTCATGTGAAGGCT
*
16648535 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATG
640 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATG
* * * *
16648600 TGCCTAAACCCACCTACCACTCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGTCGACGTA
705 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* *
16648665 GTGCCCGCCCGCCCGCCTGCCCGTTT-GTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCC
770 GTGCCCGCCCGCCC-CCTGCTCGTTTCG--TCAAC---TGGCTTAGGCATACGGAGTTCATTCCC
* * * * *
16648729 AGTCTAAGATCGGACCAGACCGAGGGTTACGACAGCAGGATCGACAACATGC
829 AGTCTAAGATCAGA-CAGACTGAGGGTTGCG--AGCAAGATCG-CTACA--C
* * *
16648781 AGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCC-CCCCTCTGGCCGGTTGAACGCCCGCAC
1 AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
* * * * **
16648845 GCTCGTTTCCTGGGTTCACTTAGGTATA-GGAGTTCATTCCCAGTCTCAGTATACGTTGTTCATT
66 GCTCGTTTCGTGGGTTCACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* * * * * *
16648909 CCCAGTCTAAGATCGGACCGGATCGAGGGTTGCGACAGCACATGCTAGGCTTGAGCATGTGCTGG
131 CCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGG
* *
16648974 TGCCGTATTTGTCTTCGTCGGGGCACCATC
196 TGCCATATTTTTCTTCGTCGGGGCACCATC
16649004 GTCGGAGCAT
Statistics
Matches: 1768, Mismatches: 188, Indels: 93
0.86 0.09 0.05
Matches are distributed among these distances:
874 1 0.00
875 57 0.03
876 3 0.00
877 3 0.00
878 10 0.01
879 344 0.19
880 161 0.09
881 2 0.00
882 2 0.00
884 3 0.00
885 142 0.08
886 311 0.18
887 103 0.06
888 7 0.00
889 5 0.00
890 353 0.20
891 4 0.00
892 13 0.01
893 151 0.09
894 92 0.05
895 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (874 bp):
AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
GCTCGTTTCGTGGGTTCACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
CCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGG
TGCCATATTTTTCTTCGTCGGGGCACCATCACCGGAGAACCTGACCGACGGCATTGGGTTCCGGC
CATCGGGGGGAGGGGGGTGTGCGCACATGATGTGCGATGTGTGCTGGTACTTGGCCCTTATATTG
GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGACACTTTTTTCAAATGGTCACAAAATCT
TGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCACGCCAACAAAAATACAAGGATCACGTCT
ACCAAGTTTGGGGCCAAAAATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCGAAAAGTTTGAA
AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCAT
TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCC
ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG
CCCCCTGCTCGTTTCGTCAACTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACAG
ACTGAGGGTTGCGAGCAAGATCGCTACAC
Found at i:16651964 original size:26 final size:26
Alignment explanation
Indices: 16651892--16651956 Score: 130
Period size: 26 Copynumber: 2.5 Consensus size: 26
16651882 ATATTACGAC
16651892 CTGGGAATGAACTCCATATGCTTAGA
1 CTGGGAATGAACTCCATATGCTTAGA
16651918 CTGGGAATGAACTCCATATGCTTAGA
1 CTGGGAATGAACTCCATATGCTTAGA
16651944 CTGGGAATGAACT
1 CTGGGAATGAACT
16651957 TCGTATGCCT
Statistics
Matches: 39, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 39 1.00
ACGTcount: A:0.31, C:0.18, G:0.25, T:0.26
Consensus pattern (26 bp):
CTGGGAATGAACTCCATATGCTTAGA
Found at i:16653523 original size:26 final size:26
Alignment explanation
Indices: 16653487--16653568 Score: 155
Period size: 26 Copynumber: 3.2 Consensus size: 26
16653477 TCGGTCCAAT
*
16653487 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16653513 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16653539 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16653565 CTTA
1 CTTA
16653569 AGTCAACCCA
Statistics
Matches: 55, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 55 1.00
ACGTcount: A:0.27, C:0.18, G:0.26, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16655876 original size:26 final size:26
Alignment explanation
Indices: 16655840--16655892 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16655830 CTGATCCGAT
*
16655840 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16655866 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16655892 C
1 C
16655893 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16656429 original size:899 final size:904
Alignment explanation
Indices: 16654548--16656810 Score: 2975
Period size: 899 Copynumber: 2.5 Consensus size: 904
16654538 ATCGGCTGGG
* *
16654548 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTG
1 TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* * *
16654613 TGAACATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACGGGCCGCAAACCTGTAAA
66 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
16654678 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
131 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* *
16654743 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACA-CCCCCTG------ATCACCGGAA
196 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCATCACCGGAA
* * * * *
16654801 CCCCAATGCCGCCGATTAGGTTCTCCGACGATGCTCCAACGAGGGTGGCCCGACGAAAAAAAATG
261 -CCCAATGCCGCCGGTCAGGTTCTCC-ACGATGCT----CGATGGTGCCCCGACGAAGAAAAATG
* * * * **
16654866 CGGCACCAGCACATGCCGGAGCTCAGCATGTGCTGTCACAACCCTCAGTCCGGTCTAATCTTAGA
320 TGGCACCAGCACATGCCGGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGA
* * * * *
16654931 TTGAGAATGAACTCCATACGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
385 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
*** *
16654996 CGAGGGTGCGGGCGCTCTGTCGACCACAGAGGCGGGATGCGCAAGCCGGGGATCGGTCGTGGCCC
450 CGA-GGTGCGGGCGCTCAACCGACCACAGAGGCGGGATGCGCAAGCCGGGGATCGGCCGTGGCCC
* * *
16655061 CCTCTTCGTCCACCGAATCCTACTGCCAGCAACCCTCGGTCCCCGATCTGATCTTAGACTAGGAT
514 CCTCTGCATCCACCGAATCCTACTACCAGCAACCCTCGGT-CCCGATCTGATCTTAGACTAGGAT
* * * *
16655126 GAACGTCTGTATGGCCTAAGGCCAACCGATGAAACGAGCAGTGCGGGCCAGACGCGGTGGTCACT
578 GAACGTCCGTATGGCCTAAGGCCAACCGATCAAAC-AGCAGAGCGGGCCAGACGCGGCGGTCACT
* * * * *
16655191 ACGTCGAGCCAGATAACGGGTATCCACAAGCCTTATCGATAGGGTGGTGTAGGTGGGCTTAGGCA
642 ACGTCCAGCCAGATAACGGGGATCCACAAGCCTGATCGATAGAGTGGTGTAGGTGGGCTTAGCCA
* * *
16655256 CATCTTCATATTTTCTGGGATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCGT
707 CATCTTCATATTTTCTGGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGGTCCCT
* *
16655321 TAGCCTTCACATGAAGATTTCATGGCAAGATGACCTCATTTCCCTATTTTTCCTGATATTCAAAA
772 TAGCCTTCACATGAAGATTTCATGGCAAGATGACCTCATTTCCCAATTTTTCATGATATTCAAAA
* * * * *
16655386 GTTTTTACGGTTTGGGATTTTTAAAATTTTTTTGCTAGTAGTTTTGGCCCCAAACTTGGTAGATG
837 CTTTTTACGGTTCGGGATTTTTAAAATTTTTTTGCAAGGAGTTTTGGCCCCAAACTAGGTAGATG
16655451 TGA
902 TGA
16655454 TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
1 TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
*
16655519 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAATGGCAGCAAACCTGTAAA
66 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
16655584 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATA
131 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
*
16655649 AGGGCCAAGTACCAGCACCCATCGCACATCATGCGCGCACACCCCCCGGCCCCCCCAATCACCGG
196 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCC-ATCACCGG
*
16655714 AACCCTAATGTCGCCGGTCAGGTTCTCCACGATGCTCTGGGGATGGTGCCCCGACGAAGAAAAAT
259 AACCC-AATGCCGCCGGTCAGGTTCTCCACGATGCTC----GATGGTGCCCCGACGAAGAAAAAT
* ** * *
16655779 GTGGCACCAGCACATGTCGGAGCCCAGTGTGTGCTGCCGCAACCCTCGGTCCTGATCCGATCTTA
319 GTGGCACCAGCACATGCCGGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCC-GGTCCGATCTTA
*
16655844 GACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
383 GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * *
16655909 AACGA-GTGCCGAGGCGCTCAACCGGCCAGAGGGGCGGGATGCGTAAGCTGGGGATCGGCCG-GG
448 AACGAGGTG-CG-GGCGCTCAACCGACCACAGAGGCGGGATGCGCAAGCCGGGGATCGGCCGTGG
* * * * * *
16655972 TCCCCCTCTGCATGCGATCG-ATCCTGCTACCA-CAACCCTCGGT-CTGGTC-GATCTTAGACTG
511 -CCCCCTCTGCAT-CCACCGAATCCTACTACCAGCAACCCTCGGTCCCGATCTGATCTTAGACTA
*
16656033 GGAATGAAC-TCCGTAT-GCCTAA-GCCAACCGA-CAAA-A-C-GAGCGGG-CAGGCG-GGCGAG
574 GG-ATGAACGTCCGTATGGCCTAAGGCCAACCGATCAAACAGCAGAGCGGGCCAGACGCGGCG-G
* * *
16656089 -CACTACG-CCAGCCAGA-AAGGTGGGATGCGCAAGCCGTGGATCGATAGAGT-G-GTAGGTGGG
637 TCACTACGTCCAGCCAGATAACG-GGGATCCACAAGCC-T-GATCGATAGAGTGGTGTAGGTGGG
* * *
16656149 TTTAGCCATATCTTCATA-TTTCT-GCATGCCAATGCCATTTTTATGGCTTGCGAATTCATACAA
699 CTTAGCCACATCTTCATATTTTCTGGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATACAA
** * *
16656212 TGGTCCCTTAGGCCTTCATGTGAAG-TTTCATGGCAAGATGA-CTCCTTT-TCAATTTTTCATGA
764 TGGTCCCTTA-GCCTTCACATGAAGATTTCATGGCAAGATGACCTCATTTCCCAATTTTTCATGA
* * * * * * * *
16656274 TTTTTAAAACTTTTTGCGGTTCGGGATTTTTTTGAATTTTTTTTGGAAGGAGTTTTGGCCTCGAA
828 TATTCAAAACTTTTTACGGTTCGGGA--TTTTTAAAATTTTTTTGCAAGGAGTTTTGGCCCCAAA
16656339 CTAGGTAGATGTGA
891 CTAGGTAGATGTGA
* *
16656353 TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAATGTACAAGATTTTG
1 TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* *
16656418 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCGGCAAACCTGTAAA
66 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
16656483 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
131 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * **
16656548 AAGGCCAAGTACCAGCACCCATCGCA-ATCATTTGCGCACACCCCCCGGCCACCCCGATCGTCGA
196 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC-CCCC-ATCACCG-
* ** * *
16656612 AAACCCAATGCCATCAGTCAGGTTCT-C-CG--G--CGATGGTGCCCTGACGAAGAAAAATGTGG
258 GAACCCAATGCCGCCGGTCAGGTTCTCCACGATGCTCGATGGTGCCCCGACGAAGAAAAATGTGG
* * * * *
16656671 CACCAGCACATGCCTGAGCCCAGCATGTGCTGTCGCAACCCTCGTTTCGGCCCGATCTTAGACTA
323 CACCAGCACATGCCGGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* *
16656736 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGA
388 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
16656801 GCGTGCGGGC
453 G-GTGCGGGC
16656811 AAGCGGGCAC
Statistics
Matches: 1206, Mismatches: 120, Indels: 81
0.86 0.09 0.06
Matches are distributed among these distances:
887 79 0.07
888 70 0.06
889 3 0.00
892 1 0.00
894 1 0.00
896 2 0.00
897 35 0.03
898 51 0.04
899 324 0.27
900 20 0.02
901 43 0.04
902 12 0.01
903 16 0.01
904 6 0.00
905 1 0.00
906 228 0.19
907 6 0.00
908 3 0.00
909 9 0.01
910 7 0.01
911 19 0.02
912 10 0.01
913 3 0.00
914 91 0.08
915 162 0.13
916 4 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (904 bp):
TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCATCACCGGAA
CCCAATGCCGCCGGTCAGGTTCTCCACGATGCTCGATGGTGCCCCGACGAAGAAAAATGTGGCAC
CAGCACATGCCGGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGA
ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGGT
GCGGGCGCTCAACCGACCACAGAGGCGGGATGCGCAAGCCGGGGATCGGCCGTGGCCCCCTCTGC
ATCCACCGAATCCTACTACCAGCAACCCTCGGTCCCGATCTGATCTTAGACTAGGATGAACGTCC
GTATGGCCTAAGGCCAACCGATCAAACAGCAGAGCGGGCCAGACGCGGCGGTCACTACGTCCAGC
CAGATAACGGGGATCCACAAGCCTGATCGATAGAGTGGTGTAGGTGGGCTTAGCCACATCTTCAT
ATTTTCTGGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGGTCCCTTAGCCTTCA
CATGAAGATTTCATGGCAAGATGACCTCATTTCCCAATTTTTCATGATATTCAAAACTTTTTACG
GTTCGGGATTTTTAAAATTTTTTTGCAAGGAGTTTTGGCCCCAAACTAGGTAGATGTGA
Found at i:16656765 original size:26 final size:26
Alignment explanation
Indices: 16656727--16656779 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16656717 TCGGCCCGAT
16656727 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
16656753 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16656779 C
1 C
16656780 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16657432 original size:26 final size:26
Alignment explanation
Indices: 16657403--16657455 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16657393 CTGGTCTGAT
*
16657403 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16657429 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16657455 C
1 C
16657456 CAAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16658806 original size:865 final size:863
Alignment explanation
Indices: 16657000--16664413 Score: 7384
Period size: 890 Copynumber: 8.4 Consensus size: 863
16656990 TATTTTTCAT
16657000 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
16657065 TTGTTGGCATGCACAAAAAAATTCAGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
16657130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCGGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
16657195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * ** * *
16657260 CCAGCACCCATCTCACATCATGTGCGCACAGCCCCGCTGGCCCGTCGATCGTCGGAACCCTAACG
261 CCAGCACCCATCGCACATCATGTGCGCACA-CCCC-CCGGCCCCCCGATCGTCGGAACCCCAATG
* * * * ** * * * **
16657325 TCAC-CCGATCAGGTTTTTCGACG--A-T-CAAC-AC-ATG-----TCGCAGC-CCAGCATGTGC
324 -C-CGCCGGTCAGGTTCTCCGATGACAGTGCCCCGACGAAGAAAAAT-GCGGCACCAACACATGC
* * * * * * *
16657377 TATCGCAGCCC-TC-GGT-CTG--GTCTGA-TCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
386 --CCG-AGCCCAGCATGTGCTGCCG-C-AACCCTCAGTCT-GG--T---C-C-G-AT-CTTAGAC
* * * **
16657436 TGGGAATGAACTCCGTATGCCAAAGTTAACCCATGAAATAAGCGTGCGGGTGCTCAGCCGGCCAG
436 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAG
** * * * * * * * * * *
16657501 -AGTTTCGGTACGTGCGAGCCAGGGATCGACTGGGTCCCCCTCTACGTGCTGCTGATACTACTAT
501 AAG-GGCGGGATGCGCAAGCCGGGGATCGGC-GGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGT
* * * * * * *
16657565 AGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAACCCAACCAAGG
564 CGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* ** *
16657630 AAACGAGCGGGCGGATGGGCGGGCAGGCAGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGC
629 AAACGAACGGGC----GGGCGGGC--G--GGCGGGCACTACACCGGCCA-AAAGACGGGATGCGC
* * **
16657695 AAGCCATGGATCGAT-GGGTGGTAGGTGGGTTTAGCCACATTTTCATATTTCTATGTGCCAATGC
685 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
* *
16657759 CATTTTTATGGCTTGTATATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAG
750 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
16657824 ATGACTCATTTTCTATTTTTTATGATTTTTAAAACTTTTTATGGTTCAG
815 ATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGG
* * *
16657873 TATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAGCTTGTTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
16657938 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGATGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
16658003 AAAAAGTGTCCCCATTTTC-GACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAATG
131 AAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
**
16658067 CTC-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGTGAAGT
195 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * *** * *
16658131 ACCAGTACCCATCACACAACATTGTGCGCAC-CCACTCCAAACCCGCAGATCGTCGGAACCCCAA
260 ACCAGCACCCATCGCACATCA-TGTGCGCACACC-C-CCCGGCCCCCCGATCGTCGGAACCCCAA
* * *
16658195 TGCCGCAGGTCAGGTTCTCCGATGACAGTGCCCAGACGAAGAAAAATGCGACACCAACACATGCC
322 TGCCGCCGGTCAGGTTCTCCGATGACAGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCC
* * * *
16658260 CCAGCCCAGCATGTGCTACTGCAACCCTCAGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGT
387 CGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGT
16658325 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAAGGGCGGGATGCGCA
452 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAAGGGCGGGATGCGCA
* * * * **
16658390 AGCCGGGGATCGGCCGATCCCCCTCTGCGTGCT-ATCGATCTTGCTGTCGCAACCCTTGGTCCGG
517 AGCCGGGGATCGGCGGGTCCCCCTCTGCGTGCTGCT-GATCCTGCTGTCGCAACCCTCAGTCCGG
* * *
16658454 TCCGATCTTACACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAATGGGCGGGCG
581 TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCG
* * * * * *
16658519 GGCGGGTGGGTACTACGCCGGTCAAAGAGTCGGGATGCGTAAGCCATGGATCGATAGGGTGGTAG
646 GGCGGGCGGGCACTACACCGGCCAAA-AGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAG
* * *
16658584 GTGGGTTTAGGAACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTATATTCATA
710 GTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
16658649 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCATTTTCTGTTTTTCACGA
775 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGA
16658714 TTTTTGAAACTTTTTATGGTTCGG
840 TTTTTGAAACTTTTTATGGTTCGG
* * * *
16658738 GATTTTTTAAAATTTTTTCGAAATGAGTTTTGGCCCCAAGCTTGTTAGACGTGATCCTTTTATTT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * * *
16658803 TTGTTGGCAGGCATAAAAATATTCAACTAAAAACTTGATGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
16658868 AAAAAGTGTCCCCATTTCAGGCACTTTAATGGCTACTGGCAGCAAACCTTTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
**
16658933 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGTGAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
16658998 CCAGCACCCATCACACATCATGTGCGCGCACCCCCCGGCCCCCCCGATCGTTGGAACCCCAATGC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGC
* * * * * * * *
16659063 CGCAGGTCAGGTTCTCCGACGACGGTGCCCAGACAAAGAAAAATACGACACCAACACATGCCCCA
325 CGCCGGTCAGGTTCTCCGATGACAGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGA
** *
16659128 GCCCAGCATGTGCTGCAACAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATAAACTCCGTATG
390 GCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16659193 CCTAAGTCAACCGACGAAACGAGCATGCAGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
455 CCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAAGGGCGGGATGCGCAAGC
* * * ** *
16659258 CAGGGATTGGTCGGGTCCCCCTCTGCGTGCTG-TCGATCCTGCTAAT-GCAA-CCTTTGTTTCGG
520 CGGGGATCGG-CGGGTCCCCCTCTGCGTGCTGCT-GATCCTGCT-GTCGCAACCCTCAG-TCCGG
* * * *
16659320 TCCGATCTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACTGAC---A-GAACGAGCGGACG
581 TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCG
* * *
16659381 GGCGGGCGGGCACT--A--TG-C------C-GG-T----TAG--A--GA--GA-CGGGTGGTAGG
646 GGCGGGCGGGCACTACACCGGCCAAAAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
* *
16659422 TGGGTTTAGGCACATCTTCATATTTCTACATGCCAATACCATTTTAATGGCTTGTAAATTCATAC
711 TGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* *
16659487 AATGGTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGAT
776 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGAT
** *
16659552 TTTTGAAACTTTTTGCGGTTCGT
841 TTTTGAAACTTTTTATGGTTCGG
* *
16659575 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTT-TAATT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-ATT
* * * * * * * * *
16659639 TTTGTGGGCAAGCA-CAAAAAATTTAGCTAAACACTCAAAGTGTACAACATTTTGAGCCCATTTG
65 TTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
16659703 AAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAGAATCTCAAATG
130 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
16659768 CTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
195 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
16659833 ACCAGCACCCCTCGCACATCATGTGCGCACACCCCCCGACCCCCCGATCGTCGGAACCCCAATTC
260 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGC
* *
16659898 CGTCGGTCAGGTTCTCCGGCGATACTCCGACGACGGTGCCCCGACGAAGAAAAATACGGCACCAA
325 CGCCGGTCAGGTTCT-C--CG--A-T--GAC-A--GTGCCCCGACGAAGAAAAATGCGGCACCAA
** * * *
16659963 CACATGCTGGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATG
379 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATG
* *
16660028 AACTTCGTATGCTTAGACTGGGAATGAACTTTGTATGCCTCAATCAACCCATGAAACGAGCGTGC
444 AACTCCGTATGC-----C------T--A------A-G------TCAACCCACGAAACGAGCGTGC
* * * * *
16660093 GGGTGCTCAGCCGGCAAGAGGGGCAGGATGCGCAAGCCAGGGATCGATCGGGTCCCCCTCTGCGT
483 GGGTGCTCAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGGGATCG-GCGGGTCCCCCTCTGCGT
* ** * * * * * * * *
16660158 ACTGCAAATCCTACTGTCGTAACCCTCACTCTGGTCTGATCTAAGACTGGGAATGAACTCCATAA
547 GCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * * ** *
16660223 GCCTAAGCCGACCGACGAAATG-A---GCGGGCGGGCGGGCGGGCACTACGCCGTTCAGAGAGAC
612 GCCTAAGCCAACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACACCGGCCA-AAAGAC
* *
16660284 GGGATGCGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-AGC
676 GGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA-C
*
16660348 ATTCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
740 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * *
16660413 TCGTGGCAAGATGACTCGTTTTCGATTTTTCATGATTTTTGAAACTTTTTATGAG-TCGG
805 TCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTATG-GTTCGG
* * *
16660472 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG-CCCAAACATGGTAGACGTTATCCTTTTATTT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
16660536 TTTTTGGCATGCACAAAAAAATTTC-GCTAAAAACTCGAAGTGTACAACATTTTGTGACCATTCG
66 TTGTTGGCATGCATAAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * **
16660600 AAAAAAGTGTCCCCATTTCAAACACATTAATGGCTACTGGCAGCAAACCACTAAAATCTCAAATG
130 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
16660665 CTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGACAAGT
195 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
16660730 ACCAGTACCCATCACACATCATGTGCGCACACCCGCCGGCCCTCCCGATCGTCGGAACCCCAATG
260 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC-CCCGATCGTCGGAACCCCAATG
* * * * *
16660795 CCGCCGATCAGGTTCTCCGGCGATGCTCCGAGGATGGTGCCCTGATGAAGAAAAATACGGCACCA
324 CCGCCGGTCAGGTTCT-C--CGA---T--GA-CA--GTGCCCCGACGAAGAAAAATGCGGCACCA
* * * * * *
16660860 ACACATGCCCGAGCCCAGCATGTACTGCCACAAACCTTAATCTAGTCCGATCTTAGACTGGGAAT
378 ACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAAT
* * * * ** * **
16660925 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAATTTCGTATGC
443 GAACTCCGTATGCCTA-A----G--TCAAC-CC--A--C-GAAAC---G-A-G-CGTGCGGGTG-
* *** * * * ** * ***
16660990 CTAAGTCAACCCATGAAACGAGAGTGCGGG-TGCTC-AGTCGGCCAGAGGGGTGGGATGCGCAAG
488 CTCAG-CCGGCCA-G--A--AG-G-GCGGGATGCGCAAGCCGG--GGATCGGCGGG-T-C-CCCC
* * * * ** * ** *
16661053 T-TG-GGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTACTGCAACTCTCAGTTTGG
540 TCTGCGTGCT-G--CTGATCCTGCTGT-C--GCAACC-C---T-C-A--G----TC-C-----GG
** * * * ** *
16661116 TATGATATTAGGCTGGGAATGAACTCCATATGCCTAAGCCAACCGAC-AAAATAAGCGAGCGGGC
581 TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAA-CGGGCGGGC
* ** * *
16661180 GGGCGGGCGGGCACCACACTAGCCAGAAAGACGGGATGCGCAAGCCATGGATCAATGGGGTGGTA
645 GGGCGGGCGGGCACTACACCGGCCA-AAAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTA
* *
16661245 GGTGGGTTTTGGCACATCTTCATATTTCTCCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
709 GGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * *
16661310 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCGCAAGATGACTCGTTTTCTATTTTTCACG
774 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACG
16661375 ATTTTTGAAACTTTTTATGGTTCGG
839 ATTTTTGAAACTTTTTATGGTTCGG
* * * * *
16661400 GATTTTTTAAAATATTTTCGAAAGGATTTTTGGTCCCAAACTTGGCAGATGTGAT-CTTGTATTT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
16661464 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATATGA
66 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
16661529 AAAAAGTGTCCCCATTTCATACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
16661594 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCACGAA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * *
16661659 CCAGCACCCATCGCGCATCATGTGCACACACCCCCCCCAGCCCCCTCGATCATCAGAACCCCAAT
261 CCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCC-CGATCGTCGGAACCCCAAT
* * *
16661724 GCCGTCGGTCAAGTTCTCTGACGATGCACCGACGATGGTGCCCCGACGAAGAGAAATGCGGCACC
323 GCCGCCGGTCAGGTTCTC---CGAT-----GAC-A--GTGCCCCGACGAAGAAAAATGCGGCACC
* * * *
16661789 AACACATGCCCGAGCCAAGCATGTGCTACAGCAACCCTCGGTCTGATCTAATTTAGACTGGGAAT
377 AACACATGCCCGAGCCCAGCATGTGCTGCCGCAA--C-C---C---TC------AGTCT--G---
* *
16661854 GAATTCCGTGTGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTG
422 G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * *
16661919 CGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCTGGGGATCGGTCGGGTACCCCTCTACA
482 CGGGTGCTCAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGGGATCGG-CGGGTCCCCCTCTGCG
* * * * * *
16661984 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCATA
546 TGCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
16662049 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGAGGGCAGGCGGGCACTGCACCGGCCAGAGAGA
611 TGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACACCGGCCA-AAAGA
* *
16662114 CGGGATGCGGAAGCCATGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTC-AG
675 CGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA-
* *
16662178 CGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGT
739 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* *
16662243 TTCATGGCAAGATGACTCATTTTCTATTTCTCACGATTTTTGAAACTTTTTACGAG-TCGG
804 TTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTATG-GTTCGG
* * * *
16662303 GATTTTTTAAAATTTTTTTGAAAGGATTTTTGGCCCCAAACTTTGTAGATGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * **
16662368 TTGTTGGCACGTATAAAAAAATTTAGCTAAAAACTTAAAGTGTACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
16662433 AAAAAGTGTCCCCATTTCAGACGCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
16662498 TCTTTAAGGGGGTGTGTGTTCTCGACGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
16662562 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGAAACTCCAATGCC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC
* **
16662627 GCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAG
326 GCCGGTCAGGTTCTCCGATGACAGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAG
16662692 CCCAGCATGTGCTGCCGCAACCCTTGGTCCAGTCTGATCTTAGACTGGGAATGAACTTCGTATGC
391 CCCAGCATGTGCTGCCGCAACCC----T-CA----G----T---CT-GG--T---C--CG-AT-C
* *
16662757 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGTGCTCAACC
430 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCC
* ** ** *
16662822 GGCCAGAGGGGCATGATGCGCAAGTTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCTGATCCT
495 GGCCAGAAGGGCGGGATGCGCAAGCCGGGGATCGG-CGGGTCCCCCTCTGCGTGCTGCTGATCCT
* * ** * *
16662887 GCTGCCGTAACCCTCACACCGGT-CTATTCTAAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
559 GCTGTCGCAACCCTCAGTCCGGTCCGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
16662951 CCGACAAAACGAGCGAGCGGGCGGGCGGGCGGGCACCACATCGGCCAGAAAGACGGGATTCGCAA
623 CCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACACCGGCCA-AAAGACGGGATGCGCAA
** * * * * *
16663016 GCTGTGGATCGATGGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTCCACGCCACTGCCA
687 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
*
16663081 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
752 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
* *
16663146 GACTCGTTTTCTATTTCTCACGATTTTTGAAACTTTTTATGAG-TCGG
817 GACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTATG-GTTCGG
* * *
16663193 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTTGTAGATGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
16663258 TTGTTGGCAGGCATAAAAAATTTCAGCTAAAAACTTGAAGTATACAAGATTTTGTGACCATTTGA
66 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
16663323 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
16663388 TCTTTAAGGGGTTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTG
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * *
16663453 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATTGCCGAAACTCCAATGC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGC
* ** **
16663518 CGCCGGTCAGGTTCTCTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGA
325 CGCCGGTCAGGTTCTCCGATGACAGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGA
* * * **
16663583 GCCGAGCATGTCCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
390 GCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * ** * ***
16663648 CTTAGACTGAGAATGAACTCCGTATGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCC
455 C-----CT-A-AGTCAAC-CC--A--C-GAAAC-GAG--CG---TGCGGGTG-CTCAG-CCGGCC
*
16663713 ACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCAATATGCGTAAGCCGGGGATCGGTCG
499 A-G--A--AG-G-GC-GG-G----A--TG---------C-----GC--AAGCCGGGGATCGG-CG
* ** * * ** * *
16663778 GGTCCCCCTCTGCATGCTGCTGATCCTGCTACCGTAACCCTCACTTTGGTCTGATCTAAGACTGG
532 GGTCCCCCTCTGCGTGCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCCGATCTTAGACTGG
* *** * *
16663843 GAATGAACTCCGTATGCCTAAGCCAACCGACAAAACGAACAACCAGGCGGGCGGGCGGGCACCAC
597 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTAC
* * * *
16663908 ACCGGCTAGAAAGACGGGATGCGCAAGCCGTGGATCGATGGGGTGGTAGGTGGGTTTTGGCACAT
662 ACCGGCCA-AAAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *
16663973 CTTCATATTTCTCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
726 CTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * * * * *
16664038 CTTCACGCGAAGTTTCATGTCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTGTTTA
791 CTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTA
*
16664103 CGGTTCGG
856 TGGTTCGG
* * * * *
16664111 GATTTTTTACAA-TTTTTCGGATGGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTA-CT
1 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
16664174 TTGTTGGCATGCCACAAAAGAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGA-CATTTC
66 TTGTTGGCATG-CATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
16664238 AAAAAA-TGTCCCCATTTCAAACACTTTTATGGCTTACTGGCAGCCAAACCTATAAAATCTCAAA
130 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGC-TACTGGCAG-CAAACCTGTAAAATCTCAAA
* * *
16664302 CGCTC-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAAGGATAGGGGGCC-A-ATAAGGGCAAA
193 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * *
16664364 GTACCAGCACCCACCGCACATCATGTGCGCACA-CCACCTGCCCCCCGATC
258 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
16664414 ACTGGAACCC
Statistics
Matches: 5577, Mismatches: 666, Indels: 557
0.82 0.10 0.08
Matches are distributed among these distances:
835 37 0.01
836 199 0.04
837 220 0.04
838 4 0.00
840 3 0.00
842 1 0.00
843 3 0.00
844 2 0.00
846 94 0.02
848 1 0.00
849 2 0.00
850 1 0.00
851 1 0.00
857 2 0.00
858 1 0.00
859 1 0.00
862 22 0.00
863 2 0.00
864 48 0.01
865 562 0.10
866 192 0.03
867 3 0.00
868 10 0.00
870 2 0.00
871 21 0.00
872 341 0.06
873 288 0.05
874 10 0.00
875 5 0.00
876 6 0.00
877 4 0.00
878 1 0.00
879 16 0.00
880 9 0.00
881 5 0.00
882 16 0.00
883 11 0.00
884 5 0.00
885 14 0.00
886 6 0.00
887 7 0.00
888 4 0.00
889 63 0.01
890 625 0.11
891 64 0.01
892 117 0.02
893 4 0.00
894 5 0.00
896 42 0.01
897 379 0.07
898 150 0.03
899 8 0.00
900 41 0.01
901 16 0.00
902 3 0.00
903 354 0.06
904 174 0.03
906 3 0.00
908 1 0.00
909 2 0.00
910 1 0.00
911 2 0.00
912 10 0.00
913 5 0.00
914 41 0.01
915 26 0.00
916 77 0.01
917 112 0.02
918 333 0.06
919 1 0.00
921 4 0.00
923 4 0.00
924 51 0.01
925 2 0.00
926 2 0.00
927 16 0.00
928 456 0.08
929 25 0.00
930 104 0.02
931 1 0.00
933 2 0.00
934 4 0.00
935 4 0.00
936 6 0.00
937 1 0.00
938 1 0.00
939 2 0.00
942 3 0.00
943 1 0.00
945 4 0.00
947 2 0.00
948 4 0.00
950 2 0.00
953 4 0.00
954 2 0.00
955 29 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (863 bp):
GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC
GCCGGTCAGGTTCTCCGATGACAGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAG
CCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
CTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAAGGGCGGGATGCGCAAGCC
GGGGATCGGCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGTCGCAACCCTCAGTCCGGTCCGA
TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGGGCGG
GCGGGCACTACACCGGCCAAAAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTG
AAACTTTTTATGGTTCGG
Found at i:16660049 original size:26 final size:26
Alignment explanation
Indices: 16660013--16660065 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16660003 CCGGTCCGAT
16660013 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
*
16660039 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16660065 C
1 C
16660066 CTCAATCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:16660940 original size:26 final size:26
Alignment explanation
Indices: 16660911--16660989 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
16660901 CTAGTCCGAT
16660911 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16660937 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
16660963 CTTAGACTGGGAATGAATTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16660989 C
1 C
16660990 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.18, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16662766 original size:26 final size:26
Alignment explanation
Indices: 16662730--16662782 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16662720 CCAGTCTGAT
*
16662730 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16662756 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16662782 C
1 C
16662783 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16663651 original size:26 final size:26
Alignment explanation
Indices: 16663622--16663700 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
16663612 CCAGTCCGAT
*
16663622 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16663648 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16663674 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16663700 C
1 C
16663701 CTAAGTCAAC
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.29, C:0.20, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:16667841 original size:26 final size:26
Alignment explanation
Indices: 16667812--16667861 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
16667802 CCGGTCTGAT
*
16667812 CTTACACTGGGAATGAACTCCGTACA
1 CTTACACTGGAAATGAACTCCGTACA
* *
16667838 CTTAGATTGGAAATGAACTCCGTA
1 CTTACACTGGAAATGAACTCCGTA
16667862 TGCCTAAGTC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.32, C:0.22, G:0.20, T:0.26
Consensus pattern (26 bp):
CTTACACTGGAAATGAACTCCGTACA
Found at i:16668042 original size:890 final size:892
Alignment explanation
Indices: 16666317--16668730 Score: 3037
Period size: 890 Copynumber: 2.7 Consensus size: 892
16666307 GGCCAAAGAG
* *
16666317 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATATCTGCCTG-CCAATGCCATTTTTATGGC
1 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT--ATGTCCAATGCCATTTTTATGGC
* * *
16666381 -TGATAAATTCATACAATGGTCCCTGAAGCCTTCCCGTGAAGTTTCATGGCAAGATGACTCGTTT
64 TTG-TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * *
16666445 TCTATTTTTCATGATTTTTGAAACTTTTTGTTGTTCGGGATTTTTTAAAATTTTTTCAGAATGAG
128 TCTATTTTTCACGATTTTTGAAACTTTTT-TGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAG
* * * * *
16666510 -TTTGGCGCCAAACTTGGTAGCCATAATCCTTGTATTTTTTTTCGCATGCACAAAAAAATTCAAC
192 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTT-GCATGCACAAAAAAATTCAGC
* * *
16666574 TAAAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCAGACTCTTT
256 TAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
16666638 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTTTGAGTTCTCGAGG
321 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGG
* * * * *
16666703 TTTGATGAAAGATAGGGGGCCAATATAAGGGCCAAGTAGCAGCTCCCATCACACATCATGTGCGC
386 TTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTA-CAGCACCCATCGCACATCATGTCCAC
* * ** *
16666768 ACACCCCCCGGCCCCGTCGATCGTCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGTGATGCTT
450 ACACCCCCCGGCCCCGCCGATCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTC
** * * *
16666833 CGGGGATGGTGCCCCAGCGAAGAAAAATACCACACCAGCGCATGCCTGAGCCCAGCATGAGCTGT
515 CGACGATGGTGCCCCAGCGAAAAAAAAGACCACACCAGCACATGCCTGAGCCCAGCATGAGCTGT
* * * * ** * *
16666898 CGTAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTGGACTGGGAATGA
580 CGCAACCCTCGATCCAGTCCGATCTTACACTGGGAATGAACTCCGTACACTTAGACTGGAAATGA
** * * * *
16666963 ACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACAGGCGTTCAGCCGGCTAGAGGGGCGAG
645 ACTCCGTATGCCTAAGTCAACCCACCAAACAAGCGTACAGGCGCTCAGCCGACCAGAGGGGCGAG
* * * * *
16667028 ATGCGTAAGTCGAGGATTCGATCGAGTCCCCCTCTACGTGCTACCGATCCTATTGCCGCAACTCT
710 ATGCGCAAGCCGAGGATTCGATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGCAACTCT
* * *
16667093 CGATCTGATCCGATCTTAGACTGGGAATGAACTCTATATTCCTAAGCCAACCGACGAAAC-G-A-
775 CGATCCGATCCGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCAACCAACGAAACAGTAG
* * *
16667155 GC-GGGCGGGCACTATGCC-AGCCAGAGAGACGGGATGCGTAAGTCATGGATCA
840 GCGGGGCGGGCACTACGCCGA-CCAGAGAGACGGGATGCGCAAGCCATGGATCA
16667207 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTTCCAATGCCATTTTTATGGCT
1 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATG-TCCAATGCCATTTTTATGGCT
*
16667272 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAGACGACTCGTTTTC
65 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
16667337 TATTTTTCACGATTTTTGAAACTTTTTTGGTTTGGGATTTTTTAAAATTTTTTTGGAAAGAGTTT
130 TATTTTTCACGATTTTTGAAACTTTTTTGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGTTT
16667402 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATGTTTTTTTGCATGCACAAAAAAATTCAGCTAA
195 TGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTTTTGCATGCACAAAAAAATTCAGCTAA
* *
16667467 AAGCTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAT
259 AAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* *
16667532 GCCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCGAGGTTT
324 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTT
*
16667597 GATGAAGGATAGGGGTCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTCCACACA
389 GATGAAGGATAGGGGGCCAATATAAGGGCCAAGTAC-AGCACCCATCGCACATCATGTCCACACA
* **
16667662 TCCCCCCCGGCCGCC-CCGATCGCCGGAACACC-AATGCCGTCGGTCAGGTTCTTTGGCAATGCT
453 --CCCCCCGGCC-CCGCCGATCGCCGGAAC-CCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCT
* ** *
16667725 CCGACGATGGT-CCTCC-GAC-AAAAAAAAGGCGGCACCAGCACATG-CTCGAG-CTAGCAT-AT
514 CCGACGATGGTGCC-CCAG-CGAAAAAAAAGACCACACCAGCACATGCCT-GAGCCCAGCATGA-
* * * *
16667784 GCTGTCGCAACCCTTGATCCGGTCTGATCTTACACTGGGAATGAACTCCGTACACTTAGATTGGA
575 GCTGTCGCAACCCTCGATCCAGTCCGATCTTACACTGGGAATGAACTCCGTACACTTAGACTGGA
* * ** *
16667849 AATGAACTCCGTATGCCTAAGTCAACCCACCAAATAAGCTTATGGGTGCTCAGCCGACCAGAGGG
640 AATGAACTCCGTATGCCTAAGTCAACCCACCAAACAAGCGTACAGGCGCTCAGCCGACCAGAGGG
* * * * * ** *
16667914 GTGAGATGCGCAAGCCGGGGA-TCGGA-CGGGTCCCCATTTGCGTGCTGTCGATCCTACTACTGC
705 GCGAGATGCGCAAGCCGAGGATTC-GATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGC
* * *
16667977 AAC-CTTCGATCCGGTCCGATCTTAGACTGGGAATGAACTGC-GTATGCCTAAGTCAACCAACGA
769 AACTC-TCGATCCGATCCGATCTTAGACTGGGAATGAACT-CTATATGCCTAAGCCAACCAACGA
*
16668040 AACAAGTAGGCGGGAGGGGTGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTG
832 AAC-AGTAGGC-------G-GGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATG
*
16668105 GATCG
888 GATCA
*
16668110 ATAGGGTGGTAGGTGGGCTTAGGCACATCTTCATATTTCTGCATG-CCAATGCCATTTTTATGGC
1 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT--ATGTCCAATGCCATTTTTATGGC
*
16668174 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTT
64 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * *
16668239 CTATTTTTCAC-AATTTTGAAAAC-TTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGA
129 CTATTTTTCACGATTTTTG-AAACTTTTTTG--GTTCGGGATTTTTTAAAATTTTTTCGGAAAGA
* * * *
16668302 GTTTTGGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCATGTACAAAACAATTCAG
191 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTTGCATGCACAAAAAAATTCAG
*
16668367 CTAAAAAG-TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCATTTCAGACACT
255 CT-AAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
16668431 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTTGA
319 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGA
* * * * * **
16668496 GATTTCATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATTGCACATCATGTGG
384 GGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTA-CAGCACCCATCGCACATCATGTCC
* * * * **
16668561 GCACA--------CCCC-CCGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGTGATGC
448 ACACACCCCCCGGCCCCGCCGATCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGC
* * * * * *
16668617 TCCGACGATGGTGCCCC-GACGAAGAAAAATA-TAGCACCAGCAAATGCCCGAGCCCAGCATGTG
513 TCCGACGATGGTGCCCCAG-CGAAAAAAAAGACCA-CACCAGCACATGCCTGAGCCCAGCATGAG
* * * * * *
16668680 CTGCCACAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATCAACTGCGTA
576 CTGTCGCAACCCTCGATCCAGTCCGATCTTACACTGGGAATGAACTCCGTA
16668731 TACCTAAGCC
Statistics
Matches: 1333, Mismatches: 144, Indels: 89
0.85 0.09 0.06
Matches are distributed among these distances:
888 2 0.00
889 31 0.02
890 331 0.25
891 277 0.21
892 28 0.02
893 118 0.09
894 31 0.02
895 50 0.04
902 12 0.01
903 183 0.14
904 261 0.20
905 9 0.01
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (892 bp):
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTCCAATGCCATTTTTATGGCTT
GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
ATTTTTCACGATTTTTGAAACTTTTTTGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTT
GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGCATGCACAAAAAAATTCAGCTAAAA
GCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGA
TGAAGGATAGGGGGCCAATATAAGGGCCAAGTACAGCACCCATCGCACATCATGTCCACACACCC
CCCGGCCCCGCCGATCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTCCGACGA
TGGTGCCCCAGCGAAAAAAAAGACCACACCAGCACATGCCTGAGCCCAGCATGAGCTGTCGCAAC
CCTCGATCCAGTCCGATCTTACACTGGGAATGAACTCCGTACACTTAGACTGGAAATGAACTCCG
TATGCCTAAGTCAACCCACCAAACAAGCGTACAGGCGCTCAGCCGACCAGAGGGGCGAGATGCGC
AAGCCGAGGATTCGATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGCAACTCTCGATCC
GATCCGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCAACCAACGAAACAGTAGGCGGGG
CGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCA
Found at i:16668479 original size:904 final size:887
Alignment explanation
Indices: 16664568--16668730 Score: 3936
Period size: 829 Copynumber: 4.8 Consensus size: 887
16664558 GAGCGGGCGG
* * * * * *
16664568 GCGGGCGGGCACTACGCC-GACCAAAAAGATGAGATGCGTAAGCCGTGGATCGATAGGGTGGTAG
1 GCGGGCGGGCACTACGCCAG-CCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAG
*
16664632 GTGGGTTTAGGCACATCTTCATATTTCT-AAGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
65 GTGGGTTTAGGCACATCTTCATATTTCTGCA-TGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * * * *
16664696 ACAATGGTCCCTTAAACCTTCACGTGAAGTTTCATGGCAAGATGACACATTTTTTATTTTTCATG
129 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA-C
* * * * *
16664761 ATTTTTGAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAG
193 ATTTTTGAAACTTTTT--GGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTTGGCCCCAAA
* **
16664826 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACCTCGAAG
256 CTTGGTAGACGTGATCCTTGTATTTTT-TTCGCATGCACAAAAAAATTCAGCTAAAAAGTCGAAG
*** *
16664891 TGTACAAGATTTTGTGACCATTTCTCAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGA
320 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
16664956 AGCAATCCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCTCGA-GTTTGATTTGAGG
385 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTT-CTCGAGGTTTGA--TGAAG
* * * * *
16665020 GATAGGCGGCCAATATAA-GGCCAAGTACCAGCACCCATAG-ATATCTATGTGCGCA-ATCCCCC
447 GATAGGGGGCCAATATAAGGGCCAAGTA-CAGCACCCATCGCACATC-ATGTCCACACA-CCCCC
* *
16665082 GCGGCCCC-CCGATCGCCGGAACCCCAATG-C-T--GCC--G-----CGG---T-TTCCGACGAT
509 -CGGCCCCGCCGATCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTCCGACGAT
* * * * ** * * * *
16665131 GGT--ACC--CGAGAGAAATG-TGACA-CAGCATATG-CTAAG-CCA--ATGTGCTGGCCGCAA-
573 GGTGCCCCAGCGAAAAAAAAGACCACACCAGCACATGCCTGAGCCCAGCATGAGCT-GTCGCAAC
* ** * * * ** *
16665185 --TCG-GCTGGT-CTATCTTAGACT-GGAATGAACGT-C-AATGCTTAGAAC-GGTAATGAACTC
637 CCTCGATCCAGTCCGATCTTACACTGGGAATGAAC-TCCGTACACTTAG-ACTGGAAATGAACTC
* * *
16665242 C-TATGCCTAAG-CAA-CCA-TAAA-AGAGCGTACGGGCGCTCAG-C-ATCAGAGGGGC----TG
700 CGTATGCCTAAGTCAACCCACCAAACA-AGCGTACAGGCGCTCAGCCGACCAGAGGGGCGAGATG
* * * * * * * *
16665296 CACAAGTC--GGAAT-GATCG-GTCCCC-TCT--TTGCTGCTGATCCTACTA--GTAAC-CTCGG
764 CGCAAGCCGAGGATTCGATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGCAACTCTCGA
* * * *
16665351 TCC-AGT--GAATCTTAGACTGGGAAT--A-TCTGTATGCCT-A--CAACC-ATG-AATGT
829 TCCGA-TCCG-ATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCAACCAACGAAACGA
** *
16665401 GCTTG-GGGC-C-AGCGGCCGGGCCATGATCAAGAGAC--GATGCGC-A---A--GATCG-TAGG
1 GCGGGCGGGCACTA-C-GCC-AGCCA-G----AGAGACGGGATGCGCAAGCCATGGATCGATAGG
* * *
16665454 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAGTGCCATTTTTATGGCATGTAA
58 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
* *
16665519 ATTCATAAAATGGTTCCTTAAGCCTTCACGTGAAGTTTCTAT-GCAAGACGACTCGTTTTCTATT
123 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC-ATGGCAAGACGACTCGTTTTCTATT
* ** * * *
16665583 TTTCATGATTTTCAAAACTTTTTACGGTTTGGGATTTGTTAAAACTTTTTC-GAAAGGAGTTTTG
187 TTTCA-CATTTTTGAAACTTTTT--GGTTCGGGATTTTTTAAAATTTTTTCGGAAA-GAGTTTTG
* * *
16665647 CCCCCAAACTTGGTAGACGTTATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
248 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTCGCATGCACAAAAAAATTCAGCTAAAA
* * * *
16665712 ACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATTG
312 AGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * *
16665777 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTACGGGGGTGTGAGTTCTCAAGGTTTGA
377 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGA
* *
16665842 TG-AGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGTACAC
442 TGAAGG-ATAGGGGGCCAATATAAGGGCCAAGTA-CAGCACCCATCGCACATCATGT-C-CACAC
* * ** * *
16665906 -CCCCCCTGGCCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCTCCGACGATGCTCC
503 ACCCCCC-GGCCCCGCCGATCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTCC
* * *
16665969 GATGATGGTGCCCC-G-GTAAAGAAAAATG--CAGCACCAGCACATGCCCGAGCCCAGCATGTGC
567 GACGATGGTGCCCCAGCG-AAA-AAAAA-GACCA-CACCAGCACATGCCTGAGCCCAGCATGAGC
* * ** * * * * ** * * *
16666030 TGGC-CAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCCATATGCCTAGATTGGGAA
628 TGTCGCAACCCTCGATCCAGTCCGATCTTACACTGGGAATGAACTCCGTACACTTAGACTGGAAA
* ** * * *
16666094 TGAACTCCGTATGCCTAAGTCAACCCACAAAATGAGCGTGC-GGATGCTCAGCCGGCCAGAGGGG
693 TGAACTCCGTATGCCTAAGTCAACCCACCAAACAAGCGTACAGG-CGCTCAGCCGACCAGAGGGG
* * * * * * * * * *
16666158 C-AGGATGAGCCAA-CCGGGGA-TCGGTCGGGTCCCCCTCTATGTGCTGCCGATCCTGCTGCCAC
757 CGA-GATGCG-CAAGCCGAGGATTCGATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGC
* * * ** * * *
16666220 AACCCTTGATCC-AGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGATGAA
820 AACTCTCGATCCGA-TCCGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCAACCAACGAA
16666284 ACGA
884 ACGA
** * *
16666288 GCGGTTAGGGCA-T----TA--C-----GTC--G--GC-CAA---A--GA--GATAGGGTGGTAG
1 GCGG-GCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAG
* *
16666329 GTGGGTTTAGGCACATCTTCATATATCTGCCTGCCAATGCCATTTTTATGGC-TGATAAATTCAT
65 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG-TAAATTCAT
* * * *
16666393 ACAATGGTCCCTGAAGCCTTCCCGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATG
129 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA-C
* * *
16666458 ATTTTTGAAACTTTTTGTTGTTCGGGATTTTTTAAAATTTTTTCAGAATGAG-TTTGGCGCCAAA
193 ATTTTTGAAACTTTTTG--GTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTTGGCCCCAAA
* * * * * *
16666522 CTTGGTAGCCATAATCCTTGTATTTTTTTTCGCATGCACAAAAAAATTCAACTAAAAACTCGAAT
256 CTTGGTAGACGTGATCCTTGTA-TTTTTTTCGCATGCACAAAAAAATTCAGCTAAAAAGTCGAAG
*
16666587 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCAGACTCTTTAATGGCTACTGGC
320 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* *
16666651 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTTTGAGTTCTCGAGGTTTGATGAAAGAT
385 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAAGGAT
* * * *
16666716 AGGGGGCCAATATAAGGGCCAAGTAGCAGCTCCCATCACACATCATGTGCGCACACCCCCCGGCC
450 AGGGGGCCAATATAAGGGCCAAGTA-CAGCACCCATCGCACATCATGTCCACACACCCCCCGGCC
* * ** * **
16666781 CCGTCGATCGTCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGTGATGCTTCGGGGATGGTGCC
514 CCGCCGATCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTCCGACGATGGTGCC
* * * * *
16666846 CCAGCGAAGAAAAATACCACACCAGCGCATGCCTGAGCCCAGCATGAGCTGTCGTAACCCTCGGT
579 CCAGCGAAAAAAAAGACCACACCAGCACATGCCTGAGCCCAGCATGAGCTGTCGCAACCCTCGAT
* * ** * *
16666911 CTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTGGACTGGGAATGAACTCCGTATGCCT
644 CCAGTCCGATCTTACACTGGGAATGAACTCCGTACACTTAGACTGGAAATGAACTCCGTATGCCT
** * * * * * *
16666976 AAGTCAACCCATGAAACGAGCGTACAGGCGTTCAGCCGGCTAGAGGGGCGAGATGCGTAAGTCGA
709 AAGTCAACCCACCAAACAAGCGTACAGGCGCTCAGCCGACCAGAGGGGCGAGATGCGCAAGCCGA
* * * *
16667041 GGATTCGATCGAGTCCCCCTCTACGTGCTACCGATCCTATTGCCGCAACTCTCGATCTGATCCGA
774 GGATTCGATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGCAACTCTCGATCCGATCCGA
* *
16667106 TCTTAGACTGGGAATGAACTCTATATTCCTAAGCCAACCGACGAAACGA
839 TCTTAGACTGGGAATGAACTCTATATGCCTAAGCCAACCAACGAAACGA
* * * *
16667155 GCGGGCGGGCACTATGCCAGCCAGAGAGACGGGATGCGTAAGTCATGGATCAATAGGGTGGTAGG
1 GCGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
16667220 TGGGTTTAGGCACATCTTCATATTTCT--ATGTTCCAATGCCATTTTTATGGCTTGTAAATTCAT
66 TGGGTTTAGGCACATCTTCATATTTCTGCATG--CCAATGCCATTTTTATGGCTTGTAAATTCAT
*
16667283 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAGACGACTCGTTTTCTATTTTTCACG
129 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC-
* *
16667348 ATTTTTGAAACTTTTTTGGTTTGGGATTTTTTAAAATTTTTTTGGAAAGAGTTTTGGCCCCAAAC
193 ATTTTTGAAAC-TTTTTGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTTGGCCCCAAAC
*
16667413 TTGGTAGACGTGATCCTTGTATGTTTTTTTGCATGCACAAAAAAATTCAGCT-AAAAGCTCGAAG
257 TTGGTAGACGTGATCCTTGTAT-TTTTTTCGCATGCACAAAAAAATTCAGCTAAAAAG-TCGAAG
* * *
16667477 TGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGCCTACTGGC
320 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
*
16667542 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCGAGGTTTGATGAAGGAT
385 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAAGGAT
*
16667607 AGGGGTCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTCCACACATCCCCCCCGG
450 AGGGGGCCAATATAAGGGCCAAGTAC-AGCACCCATCGCACATCATGTCCACACA--CCCCCCGG
* **
16667672 CCGCC-CCGATCGCCGGAACACC-AATGCCGTCGGTCAGGTTCTTTGGCAATGCTCCGACGATGG
512 CC-CCGCCGATCGCCGGAAC-CCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTCCGACGATGG
* ** *
16667735 T-CCTCC-GAC-AAAAAAAAGGCGGCACCAGCACATG-CTCGAG-CTAGCAT-ATGCTGTCGCAA
575 TGCC-CCAG-CGAAAAAAAAGACCACACCAGCACATGCCT-GAGCCCAGCATGA-GCTGTCGCAA
* * * *
16667794 CCCTTGATCCGGTCTGATCTTACACTGGGAATGAACTCCGTACACTTAGATTGGAAATGAACTCC
636 CCCTCGATCCAGTCCGATCTTACACTGGGAATGAACTCCGTACACTTAGACTGGAAATGAACTCC
* * ** * *
16667859 GTATGCCTAAGTCAACCCACCAAATAAGCTTATGGGTGCTCAGCCGACCAGAGGGGTGAGATGCG
701 GTATGCCTAAGTCAACCCACCAAACAAGCGTACAGGCGCTCAGCCGACCAGAGGGGCGAGATGCG
* * * * ** *
16667924 CAAGCCGGGGA-TCGGA-CGGGTCCCCATTTGCGTGCTGTCGATCCTACTACTGCAAC-CTTCGA
766 CAAGCCGAGGATTC-GATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGCAACTC-TCGA
* * *
16667986 TCCGGTCCGATCTTAGACTGGGAATGAACTGC-GTATGCCTAAGTCAACCAACGAAACAAGTA
829 TCCGATCCGATCTTAGACTGGGAATGAACT-CTATATGCCTAAGCCAACCAACGAAAC--G-A
*
16668048 GGCGGGAGGGGTGGGCGGGCACTACGCC-GACCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
1 -GC---------GGGCGGGCACTACGCCAG-CCAGAGAGACGGGATGCGCAAGCCATGGATCGAT
*
16668112 AGGGTGGTAGGTGGGCTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
55 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
*
16668177 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTA
120 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * *
16668242 TTTTTCACAATTTTGAAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
185 TTTTTCACATTTTTG-AAACTTTTTG--GTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTT
* * * *
16668307 GGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCATGTACAAAACAATTCAGCTAAA
247 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTCGCATGCACAAAAAAATTCAGCTAAA
*
16668372 AAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCATTTCAGACACTTTAATG
311 AAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * *
16668437 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTTGAGATTTC
376 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTG
* * * ***
16668502 ATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATTGCACATCATGTGGGCACA-
441 ATGAAGGATAGGGGGCCAATATAAGGGCCAAGTA-CAGCACCCATCGCACATCATGTCCACACAC
* * * **
16668566 -------CCCC-CCGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGAC
505 CCCCCGGCCCCGCCGATCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTCCGAC
* * * * * * * *
16668623 GATGGTGCCCC-GACGAAGAAAAATA-TAGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCA
570 GATGGTGCCCCAG-CGAAAAAAAAGACCA-CACCAGCACATGCCTGAGCCCAGCATGAGCTGTCG
* * * *
16668686 CAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATCAACTGCGTA
633 CAACCCTCGATCCAGTCCGATCTTACACTGGGAATGAACTCCGTA
16668731 TACCTAAGCC
Statistics
Matches: 2808, Mismatches: 334, Indels: 314
0.81 0.10 0.09
Matches are distributed among these distances:
826 2 0.00
827 18 0.01
828 32 0.01
829 381 0.14
830 12 0.00
831 3 0.00
832 7 0.00
833 7 0.00
834 1 0.00
835 2 0.00
836 6 0.00
838 4 0.00
840 2 0.00
843 1 0.00
844 11 0.00
846 3 0.00
847 2 0.00
848 4 0.00
849 3 0.00
850 8 0.00
851 3 0.00
852 6 0.00
853 2 0.00
854 7 0.00
855 3 0.00
856 5 0.00
857 11 0.00
858 11 0.00
859 19 0.01
860 10 0.00
861 3 0.00
862 5 0.00
863 15 0.01
864 10 0.00
865 107 0.04
866 253 0.09
867 209 0.07
868 171 0.06
869 12 0.00
870 4 0.00
871 11 0.00
872 6 0.00
873 4 0.00
875 14 0.00
877 3 0.00
878 11 0.00
879 16 0.01
880 2 0.00
881 2 0.00
882 12 0.00
883 3 0.00
885 4 0.00
886 4 0.00
887 5 0.00
888 4 0.00
889 39 0.01
890 325 0.12
891 276 0.10
892 28 0.01
893 118 0.04
894 31 0.01
895 50 0.02
902 13 0.00
903 183 0.07
904 260 0.09
905 9 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (887 bp):
GCGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACATT
TTTGAAACTTTTTGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTTGGCCCCAAACTTGG
TAGACGTGATCCTTGTATTTTTTTCGCATGCACAAAAAAATTCAGCTAAAAAGTCGAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAAGGATAGGGGG
CCAATATAAGGGCCAAGTACAGCACCCATCGCACATCATGTCCACACACCCCCCGGCCCCGCCGA
TCGCCGGAACCCAAATGCCGTCGGCCAGGTTCTCCGGCAATGCTCCGACGATGGTGCCCCAGCGA
AAAAAAAGACCACACCAGCACATGCCTGAGCCCAGCATGAGCTGTCGCAACCCTCGATCCAGTCC
GATCTTACACTGGGAATGAACTCCGTACACTTAGACTGGAAATGAACTCCGTATGCCTAAGTCAA
CCCACCAAACAAGCGTACAGGCGCTCAGCCGACCAGAGGGGCGAGATGCGCAAGCCGAGGATTCG
ATCGAGTCCCCATCTACGTGCTACCGATCCTACTACCGCAACTCTCGATCCGATCCGATCTTAGA
CTGGGAATGAACTCTATATGCCTAAGCCAACCAACGAAACGA
Found at i:16669477 original size:26 final size:26
Alignment explanation
Indices: 16669427--16669478 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16669417 TCAGTCTGAT
**
16669427 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16669453 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16669479 TCTAAGTCAA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.13, G:0.27, T:0.33
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16671227 original size:26 final size:26
Alignment explanation
Indices: 16671198--16671250 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16671188 CTGGTCCGAT
* *
16671198 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16671224 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16671250 C
1 C
16671251 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16671638 original size:903 final size:897
Alignment explanation
Indices: 16668686--16671784 Score: 4154
Period size: 903 Copynumber: 3.5 Consensus size: 897
16668676 TGTGCTGCCA
* * * * * *
16668686 CAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATCAACTGC-GTATACCTAAGCCAACCAATGA
1 CAACCCTCAGTCCAGTCCAATCTTAGACTGGGAATGAACT-CTGTATGCCTAAGCCAACCGACGA
* * *
16668750 AAC-AA-GCAGGCGGGAGGGGCGGGCGGGCACTACGCCGACCAAAGAGACGGGATGCGCAAGCCG
65 AACGAACG-A-GCGGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
16668813 TGGATCGATAGGGTGGTGGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
127 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * *
16668878 TATGGCTTGTAAATTCATACAATGGTCCCGTAAGGCTTCACGTGAAGTTTCATGGCAAGACAACT
192 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
16668943 CGTTTTCTATTTTTCACAATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAA
257 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGAA
* *
16669008 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAAT
322 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGCATGCACAAAAAAAT
* *
16669073 TCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCATTTCAGAC
387 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
16669138 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
452 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * * *
16669203 CGAGGTTTGATGAGAAATAGAGGACCAATATAAGGGCCAAGTACCAGAACCCATCGTACATCATG
517 CGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
16669268 TGCTTACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
582 TGCGTACACCCCCCCG-GCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCG
* * *
16669333 ATGCTTCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAACATG
646 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
16669398 TGCTGCCGTAACCCTCGGTTCAGTCTGATCTTAGACTGGGAATGAACTTTGTATGCTTAGATTGG
711 TGCTGCCGCAA-CCTCGGTT--GTC-GATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGG
* * *
16669463 GAATGAACTCCGTATGTCTAAGTCAACCCACGAAACGAGCGTGAGGGCACTCAACTGG-TCAGAG
772 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC-GGCT-AGAG
* *
16669527 GGGCCGGGATGCGCAAGCCAGGGATAGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
835 GGG-CGGGATGCGCAAGCCAGGGATA-GCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTG
* * *
16669592 CAACCCTCAGTCCGGTCCAAT-TGTAGACAGGGAATAAACTCTGTATGCCTAAGCCAACCGACGA
1 CAACCCTCAGTCCAGTCCAATCT-TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGA
* * *
16669656 AACGAGA-GAGCGGGCGGGCGGGCGGGCACTTCGCCGGCCAGACAGACAGGATGCGCAA-CCGTG
65 AACGA-ACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * *
16669719 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTTTGCATGCCAATGCCATTTCTA
129 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* *
16669784 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAGGACGACTCA
194 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * * *
16669849 TTTTCTATTTTTCATGATTTTTGAAGCTTTTT-TGGTTCGAGAGTTTTTAAAAGTATTTC-AAAT
259 TTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGAAA-
* * * *
16669912 GGAGTTTTGGCCCCAAAATTGGCAGACGTGATCATTC-TATTTTTGTTGGCGTGCACAAAAAAAT
323 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATC-CTCGTATTTTTGTTGGCATGCACAAAAAAAT
*
16669976 TCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
387 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
16670041 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCT
452 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
16670106 CGGGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
517 CGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * ** *
16670171 TGCGTACAGCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGTCACCGGTTAGGTTCTCCGGCG
582 TGCGTACACCCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCG
* * * *
16670236 ATGCTCAGACAATGGTGCCTCGACGAAGAAAAATGTGGCACCAGCACTTGCCCGAGCCCAGCATG
646 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
16670301 TGCTGCCGCAACC-C--TTG--G----T---CT--G---G---TCTG-AT-CTTAGACTGGGAAT
711 TGCTGCCGCAACCTCGGTTGTCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAAT
* * * * *
16670344 GAACTCCGTATGCCTAAGTCAACCCAAGAAACAAGCGTGCGGGCGCTCAACCGGCCAGAAGGGTG
776 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA-CGGCTAGAGGGGCG
* ** *
16670409 GGATGCGCAAGCC-GAGGAT-GACAGGGTCCCCCTCTATGTGCTGCCGATCCTGCT-ATCG
840 GGATGCGCAAGCCAG-GGATAG-CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCT-G
* * *
16670467 CAACCCTCAGT-CTGTCCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCATCCGACG-
1 CAACCCTCAGTCCAGT-CCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGA
* * * * * * * *
16670530 -A--AACGA----GCGAGCGGGCGGTCACTATGCCAGCCAGAGAAACGGGATGCGCATGTCATGG
65 AACGAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * * *
16670588 ATCGATACGGTGGTAGGTGGGTTTATGCACATATTCATATTTCT-AAGTGCCAATGCCATTTTTA
130 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA-TGCCAATGCCATTTTTA
* *
16670652 TGGCTTGTAAATTCATAGAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAATCG
194 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * ** * *
16670717 TTTTCTCTTTTCCACGATTTTTGAAACTTTTTGTAGTTC-AGGATTTTTTAAAATTTTTTTGGAA
259 TTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGAAA
* *
16670781 GGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTCGTATTTTTTTTGGCATGCACAAAAAAATT
323 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGCATGCACAAAAAAATT
*
16670846 CAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
388 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
16670911 CTTTAATGACTACTGGCAGCAAACTTGTAAAACCTCAAATGCACTTTAAGGGGGTGTGAGTTCTC
453 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* **
16670976 GAGGTTTGATGAGGGATAGGGGGTGAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
518 GAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * *
16671041 GGCGCACA-CCCCCTGGCCCCCCGATAGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGA
583 -GCGTACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
* * * *
16671105 TGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCTAGCATGT
647 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGT
* *
16671170 GCTGTCAG-AATCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTAG
712 GCTG-CCGCAA-CCTCGGT-T-GT-CGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGG
* * *
16671234 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGTCGGCTGGAGG
772 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA-ACGGCTAGAGG
* * * **
16671299 GGCGGGATGCACAAGCCAGGGATCAGCCGTGTCCCCCTTTGCGTGCTGTTGATCCTGCTGCTG
836 GGCGGGATGCGCAAGCCAGGGAT-AGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTG
** * *
16671362 CAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGGACTCTGTATGCCTAAGCCAACCGATGAA
1 CAACCCTCAGTCCAGTCCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAA
* * * * *
16671427 ACGAACGGGCGGGCGGGTGGGCAGGCACTACGCTGGCCAGAGATACGGGATGCGCAAGCCGTGGA
66 ACGAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
16671492 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTACCAATGCCATTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
*
16671557 GCTTGTAAATTCATACAATGTTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* *
16671622 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGACTTTTTAAAATTTTTTC-AGAAGG
261 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGA-AAGG
* * * ** *
16671686 ATTTTTGGCCCTAAACTTGGTAGAAGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAACTTCA
325 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGCATGCACAAAAAAATTCA
*
16671751 GCTAAAAACTCGAAGTGTAGAAGATTTTGTGACC
390 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
16671785 TCGGCCCCCG
Statistics
Matches: 1911, Mismatches: 216, Indels: 135
0.84 0.10 0.06
Matches are distributed among these distances:
867 37 0.02
868 255 0.13
869 271 0.14
870 10 0.01
871 3 0.00
872 1 0.00
873 2 0.00
874 5 0.00
875 83 0.04
876 19 0.01
877 67 0.04
878 3 0.00
879 3 0.00
881 1 0.00
882 1 0.00
884 2 0.00
885 1 0.00
886 1 0.00
887 2 0.00
889 1 0.00
890 1 0.00
892 4 0.00
893 2 0.00
894 86 0.05
895 80 0.04
896 5 0.00
897 2 0.00
899 6 0.00
901 1 0.00
902 5 0.00
903 692 0.36
904 155 0.08
905 40 0.02
906 60 0.03
907 2 0.00
908 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (897 bp):
CAACCCTCAGTCCAGTCCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAA
ACGAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
TACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCT
CCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCTCGGTTGTCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACGGCTAGAGGGGCGGGATGC
GCAAGCCAGGGATAGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTG
Found at i:16671965 original size:26 final size:26
Alignment explanation
Indices: 16671929--16672007 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
16671919 TCAACCCGAT
* *
16671929 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16671955 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16671981 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16672007 C
1 C
16672008 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:16672901 original size:26 final size:26
Alignment explanation
Indices: 16672862--16672912 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16672852 CCCGTCCAAT
* *
16672862 CTTAGACTAGGAATGAACTTCGTATC
1 CTTAGACTACGAATGAACTCCGTATC
16672888 CTTAGACTACGAATGAACTCCGTAT
1 CTTAGACTACGAATGAACTCCGTAT
16672913 GCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.22, G:0.18, T:0.29
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCGTATC
Found at i:16673800 original size:26 final size:26
Alignment explanation
Indices: 16673764--16673816 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16673754 CCAGTCCAAT
* *
16673764 CTTACACTGGGAATGAACTCTGTATG
1 CTTACACTGGGAACGAACTCCGTATG
*
16673790 CTTAGACTGGGAACGAACTCCGTATG
1 CTTACACTGGGAACGAACTCCGTATG
16673816 C
1 C
16673817 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAACGAACTCCGTATG
Found at i:16675579 original size:26 final size:26
Alignment explanation
Indices: 16675543--16675595 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16675533 CTGGTCTGAT
16675543 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16675569 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16675595 C
1 C
16675596 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16677379 original size:26 final size:26
Alignment explanation
Indices: 16677302--16677380 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
16677292 TCGGTCTGAT
*
16677302 CTTAGACTGGGAATGAACTCTGTATT
1 CTTAGACTGGGAATGAACTCTGTATG
*
16677328 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16677354 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16677380 C
1 C
16677381 CTAAGTCAAC
Statistics
Matches: 50, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16678243 original size:26 final size:26
Alignment explanation
Indices: 16678214--16678266 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16678204 CTGATCCGAT
16678214 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16678240 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16678266 C
1 C
16678267 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16679149 original size:26 final size:26
Alignment explanation
Indices: 16679113--16679165 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16679103 CCGTTCCAAT
* *
16679113 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16679139 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16679165 C
1 C
16679166 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:16680032 original size:26 final size:26
Alignment explanation
Indices: 16679994--16680045 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16679984 CCGGTCCGAT
16679994 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
*
16680020 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
16680046 TCTAACTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.15, G:0.25, T:0.31
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCTGTATG
Found at i:16680924 original size:26 final size:26
Alignment explanation
Indices: 16680888--16680937 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
16680878 CTGGTCCGAT
16680888 CTTAGACTGGGAATGAACTCCATACG
1 CTTAGACTGGGAATGAACTCCATACG
*
16680914 CTTAGATTGGGAATGAACTCCATA
1 CTTAGACTGGGAATGAACTCCATA
16680938 TGTCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.20, G:0.22, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATACG
Found at i:16681818 original size:26 final size:26
Alignment explanation
Indices: 16681789--16681841 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16681779 CTGGTCCGAT
*
16681789 CTTAGATTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
16681815 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16681841 C
1 C
16681842 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:16682360 original size:14 final size:13
Alignment explanation
Indices: 16682326--16682365 Score: 55
Period size: 13 Copynumber: 3.0 Consensus size: 13
16682316 TTTGTTGGCA
16682326 TGCATAAAAACAT
1 TGCATAAAAACAT
16682339 TGCATAAAAACAT
1 TGCATAAAAACAT
16682352 T-CACCTAAAAACAT
1 TGCA--TAAAAACAT
16682366 GAACTGTACA
Statistics
Matches: 25, Mismatches: 0, Indels: 3
0.89 0.00 0.11
Matches are distributed among these distances:
12 2 0.08
13 14 0.56
14 9 0.36
ACGTcount: A:0.53, C:0.20, G:0.05, T:0.23
Consensus pattern (13 bp):
TGCATAAAAACAT
Found at i:16682735 original size:26 final size:26
Alignment explanation
Indices: 16682706--16682755 Score: 84
Period size: 26 Copynumber: 1.9 Consensus size: 26
16682696 CCGATCTGAT
16682706 CTTAGACT-GAGAATGAACTCCGTATG
1 CTTAGACTGGA-AATGAACTCCGTATG
16682732 CTTAGACTGGAAATGAACTCCGTA
1 CTTAGACTGGAAATGAACTCCGTA
16682756 AGCCTAAGTC
Statistics
Matches: 23, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
26 21 0.91
27 2 0.09
ACGTcount: A:0.32, C:0.20, G:0.22, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16682880 original size:104 final size:104
Alignment explanation
Indices: 16682700--16682892 Score: 314
Period size: 104 Copynumber: 1.9 Consensus size: 104
16682690 CTCTGTCCGA
* *
16682700 TCTGATCTTAGACTGAGAATGAACTCCGTATGCTTAGACTGGAAATGAACTCCGTAAGCCTAAGT
1 TCTGATCTTAGACTGAGAATGAACTCCGCAAGCTTAGACTGGAAATGAACTCCGTAAGCCTAAGT
16682765 CAACCCACGAAACGAGCGTGCGGGTGCTCCTCGGCCCAT
66 CAACCCACGAAACGAGCGTGCGGGTGCTCCTCGGCCCAT
* * * *
16682804 TCTGATCTTAGACTGGGAATGAACTCTGCAAGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
1 TCTGATCTTAGACTGAGAATGAACTCCGCAAGCTTAGACTGGAAATGAACTCCGTAAGCCTAAGT
* *
16682869 CGACCCACGAAATGAGCGTGCGGG
66 CAACCCACGAAACGAGCGTGCGGG
16682893 CACTGAGCTG
Statistics
Matches: 81, Mismatches: 8, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
104 81 1.00
ACGTcount: A:0.27, C:0.25, G:0.26, T:0.22
Consensus pattern (104 bp):
TCTGATCTTAGACTGAGAATGAACTCCGCAAGCTTAGACTGGAAATGAACTCCGTAAGCCTAAGT
CAACCCACGAAACGAGCGTGCGGGTGCTCCTCGGCCCAT
Found at i:16685443 original size:898 final size:900
Alignment explanation
Indices: 16683673--16694363 Score: 13036
Period size: 898 Copynumber: 12.1 Consensus size: 900
16683663 CCAGTTCGAT
* * * * * * *
16683673 CTTAAACTAGGAATGAACTACGTATGCCTATGTCAA-CCACGAAACGACCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
16683737 CGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCCGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
16683802 TGCTGCTGCAACCCTCGGTCCGGTCTGATCTAAGAATGGGAATCAACTCTGTATGCCTAAGCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * * * *
16683867 CCGA-TAAA--A-CGAGTGGACGAGCGGGCACTACGTCGGCCAAAGAGGCAGGATGCGCAAGTCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
16683928 TGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCT-ATGTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCATTT
* * * * *
16683992 TTATGGCTTGTAAATTCGTACAATGGTCCCTTCAGCCTTCACGTGAAGTTCCAAGGCAAGACTAC
326 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * *
16684057 TCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-G
* * * *
16684122 G-AGGTGTTTTGGCCCCAAACTTGGTAGATGTGAT-CTTGTATTTTTTTTCGCATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * *
16684185 CTTCAGCCAAAAAGTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* **
16684250 ACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCCGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16684315 CTTGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * ** * * *
16684380 TGTGAGCACACACCCCTGGCCCCCTCGATCGCCGGAACAACAATGCCGTTGGTCAGGTTCTCTGG
715 TGTGCGCACAC-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * * * **
16684445 CGATCCTCCGACGATGGAGCACCGACGAAGAAAAATGTGGCACCAGCACATGCTTGAGCCCAGCA
779 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * ** * * *
16684510 TGTGCTGCCGCTACCCTTGGTAAGGTCCAATCTTAGCCTGGGAATGAACTCCGGATG
844 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
16684567 CTTAGACTGGAAATAAACTCCGTAT-CCCAAGTCAACCCACGAAACGACCGCGCGAGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16684631 CTGCCAGAGGGGTGGGATGCGTAAGTCGAGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATGC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
16684696 TACTACTGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAATCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
16684761 TCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACGTCGGCCAGAAAGTCGGGATGTGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
16684826 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTCT-CTGTACCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCATTT
* *
16684890 TTATGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACGAC
326 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* **
16684955 TCGTTTTCTAGTTTTCACGATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCGG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
** *
16685020 AAGGAGTTTTCACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
16685085 TTCAGCTAAAAACTCCAAGGGTACCAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
521 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
16685150 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTC
586 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16685215 TCGAGGTTTGATGAGCGATAGGGGGCCAATATAGGGGCCAAGTACCAGCACCCATCTCACATCAT
651 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
16685280 GTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCTAATGCCATCGGTCAGTTTCTCCGATG
716 GTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
* * * * * *
16685345 ATGCTTCGGCGATGGTGCCCCGACGAGGAAAAATGCAGCACCAGCACATGCCCGAGACTAGCATG
781 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
16685410 TGCTGCCACAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATG
846 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16685465 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16685530 CGGTC-GAAGGGCGGGATGCACAAGGCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** *
16685594 TGCTGCCACAA-CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
16685658 CCGACAAAACGAGCGGGCGGGTGGGCGGACGGGTACTACGTCGGCCAGAGAGACGGGATGCACAA
196 CCGACGAAACGAGCGGGC----GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
16685723 GCCGTGGATCGATA-GGTGGTAGGTGGGTTTATGTACATCTTTATATTTCTGC-ATGCCAATGCC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCC
16685786 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA-CTCTTCACGTGAAGTTTCATGGCAAG
322 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC-CTTCACGTGAAGTTTCATGGCAAG
* * **
16685850 ACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAATTTTTACGGTTCAAGATTTTTTAAAATTTT
386 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * *
16685914 TTCGGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTCTTGGCATGCACAA
451 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
16685979 AACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATT
516 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
16686043 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAATGGGGG-GT
581 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGT
* * * *
16686107 GTGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCATCCATCGAA
645 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * * * * ** *
16686172 AATAATGTGTGCACACGCCCTGGCCCTCCCGACCATCAAAACCCCAATGTCGTCGGTCAGGTTCT
710 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * *
16686237 CTGGCGATTCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
775 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * *
16686302 AGCATATGCTGCTGTAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCATATG
840 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16686363 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** *
16686428 CGGCCAGAGGAGCGGGACGCACAAGCCGGGGATCGGTTGAGTCCCCCTCTGCGTGCTACCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * * * * *
16686493 TGCTGCCACAACCCTCGATCTGGTCCGATCTT--A----G-ATGAACTCCATACGCCTAAGCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16686551 CCGACGAAAAGAGCGGGCGGGCGGGTGGGAGTGCGGGCACTACGTCGGCCAGAGAGACGGGATGG
196 CCGACGAAACGAGCGGGCGGGC------G-G-GCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* ** ** * *
16686616 GCAAGCCGTGGATCAATAGGGTGGTACTTGAATTTAGGCTCATCTTCATATTTCTGC-ATGCCAA
253 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAA
* * * * *
16686680 TGCCATTTTTATGGCTTTTGAAA-TCATAAAATGTTCCCTTAAGCCTTCACATGAAGTTTCGTGG
318 TGCCATTTTTATGGCTTGT-AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* *** * * *
16686744 CAAGATGACTCGTTTTCTATTTTTTTGGATTTTTGAAA-TTTTTGCGATTCAGGATTTTTTAAAA
382 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* * * * * *
16686808 TTTTTTCGGAAGGATTTTTGGACTCAAACTTGGTAGACATGATCCTTGTCTATTTT-TTGTCATG
447 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATG
* * * **
16686872 CACAAAAAAAATCAACTAAAAAATTAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
511 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
16686937 TCACTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCATATGCTCTTTAAGGGG
576 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* ** * *
16687002 GTGTGACTTCTCGAGGTTTGATGAGCAATAGGGGGCCAATATAGGGGCCAAGTACTAGCACCCAT
641 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * **
16687067 TGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCTAATGCCACCGGTCAGG
706 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
* * *
16687131 TTCTCCGGCGATGCTCCGACGATTGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGA
771 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* *
16687196 GCCCAACATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
836 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16687261 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** * ** *
16687326 TGGCCAGAGGGGCAGGATGCGCAAGCCGAGCATCGGTCAAGTCCCCCTTTGCGTGCTACCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * **
16687391 TGCTACCGCAACCCTCGGTTCGGTCCAATCTTAGAC-GGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * *
16687455 CCGATGAAATGAGCGGGCGGGCAAGCAGGCACTATGCCGACCAGAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
16687520 TGGATCAATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGC-ATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCATTT
16687584 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC-AGA-GAC
326 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-
* * * * * *
16687647 CTCGTTTTTTA-TTTTCATGA-TTTTGAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * * *
16687710 GAATGCGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGGATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16687775 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16687840 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAGGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16687905 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAATGGCCAAGTACCAGCACCCATCGTACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
16687970 TTTGTGCACACCCCTCCGGGCCCCCCGATCG-CTGGAACCCCAATGCCATTGGTCAGGTTCTCCG
715 TGTGCGCACACCCC-CCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * ** * * ** *
16688034 ACGATGCTTCGATGATGGTGCTTCGGCGGAGAAAAATGCGATACCAACACATGCCCGAGCCCAGC
778 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * *
16688099 ATGTGCTGCCGCAACCCTCAGTCCAGTCCGATCTTAGACTGGGAATTAACTCTGTATG
843 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
16688157 CTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT--------T----
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * ** * *
16688210 ----CAGAGGGGTGGGATGCGCAAGCAGGGGATCGACCGGGTCCCCTTCTGTGTGCTACCAATAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
16688271 TGCTACCGCAACCCTCGGTTCGGTCTGATCTTTGATTGGGAATGAACTCCGTATGCCAAAGCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
16688336 CCGACGAAATGAGCGGGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGGGC--G-G-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
16688401 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATATCTAC-ATCCCAATGCC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCC
*
16688465 ATTTTTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
322 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
16688530 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTT
387 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
** * * * *
16688595 TCAAAATGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTTTTGGCATGCATAAA
452 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
16688660 AAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
517 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
16688725 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGA
582 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
16688790 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTATCAACACCCATCG--CA
647 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
16688853 -CA--T-----C-CCCCTCAGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
712 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
*
16688909 GGCGATGCTCCGACGATGGT-----G-C---------T-------CAGCACATGCCCGAGCCCAG
777 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * *
16688952 CATGTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATCAACTCCGTATG
842 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16689011 CTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCAAGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** *
16689076 CGGCTAGAGGGGCGGGATGCGCAAGTCGGCAATC-GACTGGGTCCCCCTCT--G-G--GT-G---
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATC
* * * **
16689131 CTG-T-C-ACAACCCTCGATCCAGTCTGATCTTAGACTAAGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * ** ** *
16689193 ACCAACGAAATTAGTGGGCGGGCGAGCGGGCGGGCGTTACATCGGCCAAAGAGACGGGATGCGCA
195 ACCGACG-AA--A-CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * *
16689258 AGCTGTGGATCGATAGGTTAGTAGGTGGGTTTAGGCACATCTTCATATTTCT-ATGTGCCAATGC
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGC
16689322 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
321 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
16689387 GCGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACAGTTCAGGATTTTGTAAAATTTT
386 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * *
16689452 TTCGGAAGGATTTTTGGCCCCAAACTTAGTAGACGTGATACTTGTATTTTTGTTGGCATGCACAA
451 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
16689517 AAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTGTAACCATTTGAAAAAAGTGTCCCCATT
516 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
16689582 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
581 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
16689647 AGTTCTCGAGGTTTGTTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
646 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
16689712 ATCATGTGCGCACACCCCTCCCGACCTCCCCTATCGTCGAAACCCCAATGCCGCCGGTCAGGTTC
711 ATCATGTGCGCACA-CCC-CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
* * * * * * *
16689777 TCTGGCGATGCTCTGGCGATGGTGCCCTGACGAAGAAAAATGTGGTACCAGCACATGCCCGAGCC
774 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * *
16689842 TAGCATCTGCTGCCGCAA---T--G--C--T-TGGTC-----C---G---G---TCCG-AT-
839 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16689878 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCCCGAAACGAGCGTGCTGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
16689943 CGAG-CAGAGGAGTGGGATGCGTAAGCCGGGGATTGGCCGGATCCCCCTCTACGTGCCGTCGATC
66 CG-GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* ** * * * *
16690007 CTGCTGCTATAACCCTCGGTCTGATCTGATCTTATACTGGGAATGAACTCTGTATGCCTAAGCCA
130 CTGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
16690072 ATCGACGAAACGAGCGGGC--G-GGACGGGCACTACGCCAGCCAGAGAGACAGGATGCGCAAGTC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
16690134 ATGCATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-TGTGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCATT
* * *
16690198 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACTTGAAATTTCGTGGCAAGACGA
325 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * ** *
16690263 CTCGTTTCCTATTTTTCATGATTTTTAAAAC-TTTTACGGTTCAAGTTTTTTTAAAATTTTTTCG
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * *
16690327 GAAGGAGTTTTGGCCCCAAACTTGATAGTCGTGATCCTTCTATTTTTGTTGGCATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16690392 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * * *
16690457 ACACTTTAATGACCACTGGTAGCAAACCTGCAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16690522 CTCGAGGTTTGATGAGGGATTGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
16690587 TGTGCGCAC-CCCCCCGGCCCCCCCGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCTGAC
715 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
* * *
16690651 GATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCAT
780 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * * * *
16690716 GTGCTGCCCCAACCCTCGATTCGGTCTGATCTTAGACCGAGAATGAACTCCATATG
845 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16690772 CTTTGACTGGGAATGAACT-CTTATGCCTAAGTTAACCCACAAAACGAGCGTGCGGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16690836 CGGCCAAAGGGGCGGGATACGCAAGCCGGGGATTCAGCCAGGTCCCCCTCTGTGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * * * * * * * *
16690901 TTGCT-GTCGCAACCCTTGTTTCGGTCTAAGC-CA-AC--CG-ATGAAAT--G-A-G-C--GGGC
130 CTGCTACT-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * ** * * *
16690953 -A--G--G---CGGGCAGATGGGCGGGCAGGCACTATGCCGGCCAGAGAGATGGGATGCGCAAGC
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
16691010 CGTGGATCGATAGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTTCTGC-ATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCAT
16691074 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
324 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * ** *
16691139 GCTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTTCGGTTTAGGATATTTTAAAATTTTTTC
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * * *
16691204 GGAAAGTGTTTTGGCCACAAACTTGGAAGACATGATCCTTGTGTTTTTGTTGGCATGCCCAAAAA
454 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAA
* * * * *
16691269 AAATTCAGCTAAAAACTCAAAGGGGACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCATTTT
518 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
16691334 AGACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTGAGGGGGTGTGAG
583 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
16691399 CTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCTCAT
648 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** *
16691464 CATGTGCACAC-CCCCCCAGG-CCCCCCGATCGTCGGAACCCCAATGGCAACGATCAGGTTCTCC
713 CATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
** * * *
16691527 GACGATGCTCCGGTGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCAAATGCCCGAGCCCAG
777 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
16691592 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC-T----T----A-G-A-T---T-TG
842 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16691635 ----GA-----AA-GAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
16691690 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGAT-C
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * *
16691754 AG-AACT-CGA----CGG---GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
16691810 CCGAAGAAATGAGCAGACGGACGAGCGGGCAGGCACTACGCCGGCCAGATAGACGGGATGTGTAA
196 CCGACGAAACGAGC-G--GG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
16691875 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTG-TGTGCCAATGCC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCC
16691939 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
322 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
16692004 C-ACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
387 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
** * * * *
16692068 TCAAAAGGAGTTTTGGCCCAAAACTTGGTGGACATGATCCTTGTATTTTTGTTGGCATGGACAAA
452 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
16692133 AAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGAGTCCCCATTT
517 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
16692198 CAAACACTTTAATGGCTACTGGCAGCACACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
582 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * *
16692263 GTTGTCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAGCAACACCCATTGCACA
647 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
16692328 TCATGTGTGCACACCCCCCCGGCCCCCCCGATCCTCGAAACCCCAATGCCGCCGGTCAGGTTCTC
712 TCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
** * *
16692393 CGGTG-TGCTCCGACGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTA
776 CGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * *
16692457 GCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTTGGAATGAACTCCGTATG
841 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16692517 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * * *
16692582 CGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGATCCCATTTTGCATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * * *
16692647 TGCTGCCCCAACCCT-TGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16692711 CCGACGAAACGAGCGGGCAAACGGGCGAGCGGGCGAGCAGGCACTACACCGGCTAGAGAGACAGG
196 CCGACGAAACGAGCGGG----C--G-G-GCGGGC--G--GGCACTACGCCGGCCAGAGAGACGGG
* * * *
16692776 ATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGATTTAGGTACATCTTCATATTTCTGC-ATG
249 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTG
* * * *
16692840 CCAATGCCATTTTTATGGCTTGTAAATTCATATAGTGGTCCCTTAAGCCTTAACGTGAAGTTTCT
314 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * *
16692905 TGGTAAGACGACTCGTTTTCTATTTTTCATGATTTTTTAAACTTTTTACGGTTCGGGATTTTTTA
379 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* * * *
16692970 AAAATTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGA-CCATTTTATTTTTGTTGGC
444 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGC
* *
16693034 ATGCACAAAAACATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
508 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
*
16693099 TCCCCATTTCAGACACTTTAAAGGCTA-TCGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
573 TCCCCATTTCAGACACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
16693163 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
637 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* *
16693228 CCATCGCACATCATGTGCG----CCCCCCGGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGT
702 CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGT
* * ** ** *
16693289 CAGGTTCTCCAACGATGCTCC-A-GCAT-GTGCCTCGGTGAAGAAAAATGCATCCCCAGCACATG
767 CAGGTTCTCCGACGATGCTCCGACG-ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* **
16693351 CCCGAG-CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTATTCTGGGAATGAACTCC
831 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
*
16693415 CTATG
896 GTATG
* * * *
16693420 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA-TAAGACAAGCGTGCGGGCACTCAA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA-ACGAGCGTGCGGGCGCTCAG
** * ** * * * *
16693484 CCTACCA-ATAGGGTAGGATCCGCAAGCCAGGGATTCGGTTGGGTCCCCCTCTACGTGC--T-G-
65 CCGGCCAGA-GGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
** * *
16693544 --C--C-A---CAACCCTTAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
128 TCCTGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * *
16693601 CAACCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCTGACCAAAAAAACGGGATGCGTAAG
193 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* *
16693666 CCGTGGATCGATAGGTTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTG-TGTGCCAATGCCA
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCA
* * ** *
16693730 -TTTTATGGCTTGTAAATTCATAGAATGGTCTCTTAAGCCTTCACAAGAAGTTTCATGGCAATAC
323 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
** * * *
16693794 GACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTCTT
388 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* *
16693859 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAA
453 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
** * *
16693924 AGCTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCCTTTT
518 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
16693989 AGACACTTTAATGGCTACTGGCAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
583 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * * *
16694054 TTGTCAAGGTTTGATGAGGGATAGGGGGACAATATAAGGGCCAAGTACCAGCACCCTTCACACAT
648 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
16694119 CATGTGCGCACACCCCCCGG-CCCCCCAATCG-CTGGAACCCCAATGCCATCGGTCAGGTTCTCC
713 CATGTGCGCACACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCC
* *** * *
16694182 GACGATGCTCCGGCGATGGTGCCCCGGTAAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAG
777 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * *
16694247 CATGTGCTGCCGCAACCCTCGATCTGATCCGATCTTTGACTGGGAATGAACTCCGCATG
842 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16694306 CTTGGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
16694364 ACTCTGCTGC
Statistics
Matches: 8492, Mismatches: 1042, Indels: 534
0.84 0.10 0.05
Matches are distributed among these distances:
843 7 0.00
844 1 0.00
845 2 0.00
846 1 0.00
847 1 0.00
848 6 0.00
850 3 0.00
851 1 0.00
852 3 0.00
853 33 0.00
854 193 0.02
855 2 0.00
856 1 0.00
858 509 0.06
859 5 0.00
860 5 0.00
861 7 0.00
862 9 0.00
863 6 0.00
864 1 0.00
865 191 0.02
866 195 0.02
867 302 0.04
868 123 0.01
869 10 0.00
870 41 0.00
871 344 0.04
872 181 0.02
873 2 0.00
874 5 0.00
875 10 0.00
876 64 0.01
877 192 0.02
878 88 0.01
879 379 0.04
880 442 0.05
881 132 0.02
882 5 0.00
883 54 0.01
884 13 0.00
885 199 0.02
886 129 0.02
887 14 0.00
888 282 0.03
889 12 0.00
890 2 0.00
891 2 0.00
892 113 0.01
893 221 0.03
894 497 0.06
895 27 0.00
896 339 0.04
897 113 0.01
898 1351 0.16
899 614 0.07
900 144 0.02
901 108 0.01
902 3 0.00
903 136 0.02
904 96 0.01
905 60 0.01
906 6 0.00
909 150 0.02
910 305 0.04
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
TGCTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16685475 original size:26 final size:26
Alignment explanation
Indices: 16685439--16685491 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16685429 CCAGTCCGAT
*
16685439 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16685465 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16685491 C
1 C
16685492 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16686366 original size:26 final size:26
Alignment explanation
Indices: 16686337--16686389 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16686327 CCGATCCAAT
16686337 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16686363 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16686389 C
1 C
16686390 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16687264 original size:26 final size:26
Alignment explanation
Indices: 16687235--16687287 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16687225 CCGGTCCGAT
16687235 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16687261 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16687287 C
1 C
16687288 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16688167 original size:26 final size:26
Alignment explanation
Indices: 16688131--16688183 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16688121 CCAGTCCGAT
* * *
16688131 CTTAGACTGGGAATTAACTCTGTATG
1 CTTACACTGGGAATGAACTCCGTATG
16688157 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
16688183 C
1 C
16688184 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:16689014 original size:26 final size:26
Alignment explanation
Indices: 16688985--16689037 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16688975 CTGGTCCGAT
*
16688985 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTAGGAATCAACTCCGTATG
* *
16689011 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATCAACTCCGTATG
16689037 C
1 C
16689038 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATCAACTCCGTATG
Found at i:16692520 original size:26 final size:26
Alignment explanation
Indices: 16692491--16692543 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16692481 CCGATCTGAT
* *
16692491 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16692517 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16692543 C
1 C
16692544 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16695146 original size:26 final size:26
Alignment explanation
Indices: 16695110--16695162 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16695100 CTGGTACGAT
*
16695110 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16695136 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16695162 C
1 C
16695163 CTATGTGAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16695146 original size:830 final size:829
Alignment explanation
Indices: 16693539--16695193 Score: 2481
Period size: 830 Copynumber: 2.0 Consensus size: 829
16693529 CCCCTCTACG
* * *
16693539 TGCTGCCACAACCCTTAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* * * * *
16693604 CCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCTGACCAAAAAAACGGGATGCGTAAGCCG
66 CCGACGAAACGAACAGGCGGGCAGGCAGGCACTACGCTGACCAAAAAAACGGGATGCGGAAGCCA
* **
16693669 TGGATCGATAGGTTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
131 TAGATCGATAGGTTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * *
16693734 ATGGCTTGTAAATTCATAGAATGGTCTCTTAAGCCTTCACAAGAAGTTTCATGGCAATACGACTC
196 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAAGAAGTTTCATGGCAAGACGACTC
* *
16693799 GTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTCTTCGAAA
261 GTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTCTTCGAAA
* * **
16693864 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAGCTT
326 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTATTAGCATGCACAAAAAAATT
* * * *
16693929 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCCTTTTAGACA
391 CAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACA
* *
16693994 CTTTAATGGCTACTGGCAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTC
456 CTTTAATGGCTACTGACAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * *
16694059 AAGGTTTGATGAGGGATAGGGGGACAATATAAGGGCCAAGTACCAGCACCCTTCACACATCATGT
521 AAGGTTTGATGAGAGATAGGGGGACAATATAAGGGCCAAGCACCAGCACCCATCACACATCATGT
* * *
16694124 GCGCACACCCCCCGGCCCCCCAATCGCTGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATG
586 GCGCACACCCCCCGGCCCCCCAATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATC
* * *** * *
16694189 CTCCGGCGATGGTGCCCCGGTAAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGC
651 CTCCGACGATGGTACCCCAACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * *
16694254 TGCCGCAACCCTCGATCTGATCCGATCTTTGACTGGGAATGAACTCCGCATGCTTGGACTGGGAA
716 TGCCGCAACACTCGATCTGATACGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAA
* *
16694319 TGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTC
781 TGAACTCCGTATGCCTAAGTCAACCCAGGAAACGAGCATGCGGGCACTC
*
16694368 TGCTGCCACAACCCTCGGT-TCGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
1 TGCTGCCACAACCCTCAGTCT-GGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
* * * * * *
16694432 ACCGACGAAATGAGCAGGCGGGCAGGCAGGCACTACG-TCGGCCAGAGAGACGGGATGCGGAAGC
65 ACCGACGAAACGAACAGGCGGGCAGGCAGGCACTACGCT-GACCAAAAAAACGGGATGCGGAAGC
*
16694496 CATAGATCGATAGAG-TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
129 CATAGATCGATAG-GTTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA-
**
16694560 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
192 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAAGAAGTTTCATGGCAAGACG
* ** * *
16694625 ACTTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTC
257 ACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTCTTC
* * *
16694690 GGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTAGCATGCACAAAAA
322 GAAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTATTAGCATGCACAAAAA
*
16694755 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGCGTCCCCATTTCA
387 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCA
*
16694820 GACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
452 GACACTTTAATGGCTACTGACAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
** * * *
16694885 TCTTGAGGTTTGGTGAGAGATA-GGGGCCAATATAAGGGCCAAGCACCAGCACCCATCTCACATC
517 TCTCAAGGTTTGATGAGAGATAGGGGGACAATATAAGGGCCAAGCACCAGCACCCATCACACATC
* * ** * * *
16694949 ATGTGCGCACACCCCCCGGGCCCTCCGATCGCCGGAACCCTGATGTCGCCGGTCAGGTTCTCTGA
582 ATGTGCGCACACCCCCC-GGCCCCCCAATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGA
*
16695014 CGATCCTCCGACGATGGTACCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
646 CGATCCTCCGACGATGGTACCCCAACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * *
16695079 TGTGCTGCCGCAACACTCGGTCTGGTACGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACT
711 TGTGCTGCCGCAACACTCGATCTGATACGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACT
* *
16695144 GGGAATGAACTCCGTATGCCTATGTGAACCCAGGAAACGAGCATGCGGGC
776 GGGAATGAACTCCGTATGCCTAAGTCAACCCAGGAAACGAGCATGCGGGC
16695194 GCTCAGTCGG
Statistics
Matches: 737, Mismatches: 84, Indels: 9
0.89 0.10 0.01
Matches are distributed among these distances:
828 2 0.00
829 221 0.30
830 514 0.70
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (829 bp):
TGCTGCCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
CCGACGAAACGAACAGGCGGGCAGGCAGGCACTACGCTGACCAAAAAAACGGGATGCGGAAGCCA
TAGATCGATAGGTTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAAGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTCTTCGAAA
GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTATTAGCATGCACAAAAAAATT
CAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACA
CTTTAATGGCTACTGACAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
AAGGTTTGATGAGAGATAGGGGGACAATATAAGGGCCAAGCACCAGCACCCATCACACATCATGT
GCGCACACCCCCCGGCCCCCCAATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATC
CTCCGACGATGGTACCCCAACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
TGCCGCAACACTCGATCTGATACGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAA
TGAACTCCGTATGCCTAAGTCAACCCAGGAAACGAGCATGCGGGCACTC
Found at i:16695567 original size:19 final size:20
Alignment explanation
Indices: 16695539--16695579 Score: 75
Period size: 19 Copynumber: 2.1 Consensus size: 20
16695529 TCGTTTTCTA
16695539 TTTTTCACGATTTTCAAAAC
1 TTTTTCACGATTTTCAAAAC
16695559 TTTTT-ACGATTTTCAAAAC
1 TTTTTCACGATTTTCAAAAC
16695578 TT
1 TT
16695580 GGTAGACATG
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
19 16 0.76
20 5 0.24
ACGTcount: A:0.29, C:0.17, G:0.05, T:0.49
Consensus pattern (20 bp):
TTTTTCACGATTTTCAAAAC
Found at i:16696398 original size:866 final size:873
Alignment explanation
Indices: 16694367--16699938 Score: 6162
Period size: 902 Copynumber: 6.2 Consensus size: 873
16694357 TGCGGGCACT
* * *
16694367 CTGCTGCCACAACCCTCGGTTC-GGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCC
1 CTGCTGCCGCAACCCTCAGTTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
16694431 AACCGACGAAATG-A---GCAGGCGGGCAGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGG
66 AACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * * * *
16694492 AAGCCATAGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
131 AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
*
16694557 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
196 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAG
* * *
16694622 ACGACTTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAATTTT
261 ACGACTCGTTTTCTATTTTTCACGA-TTTTCAAA------A----TC-----TTTTT--AA----
* * *
16694687 TTCGGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTAGCATGCACAA
304 -TC----GGAGTTTT-G--CAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
16694752 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGCGTCCCCATT
361 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
16694817 TCAGACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
426 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
* * *
16694882 AGTTCTTGAGGTTTGGTGAGAG-ATA-GGGGCCAATATAAGGGCCAAGCACCAGCACCCATCTCA
491 AGTTCTCGAGGTTTGATGAG-GTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCA
* ** * *
16694945 CATCATGTGCGCACACCCCCCGGGCCCTCCGATCGCCGGAACCCTGATGTCGCCGGTCAGGTTCT
555 CATCATGTGCGCACACCCCCC-GGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * * * *
16695010 CTGACGATCCTCCGACGATGGTACCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
619 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* * * * *
16695075 AGCATGTGCTGCCGCAACAC-TCGGTCTGGTACGATCTTAGATTGGGAATGAACTCCGTATGCTT
684 AGCATGTGCTGCCGCAAC-CTTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGCATGCTT
* * * * * *
16695139 AGACTGGGAATGAACTCCGTATGCCTATGTGAACCCAGGAAACGAGCATGCGGGCGCTCAGTCGG
748 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGG
* * * * * *
16695204 CCAGAGGGGCGGGATGCGAAAGTCGGGGATCGTTCGGGTCCCCTTCTGCGTGCTACCGATC
813 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATC
* * * *
16695265 CTACTACCGCAACCCTC-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
1 CTGCTGCCGCAACCCTCAGTTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
16695329 AACTGACGAAATGAACGGGCGGGTGGGAGGGCGGGCACTACGTCGCCCAGAGAGACGGGATGCGC
66 AACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * * *
16695394 AAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGTACATCTTTATGTTTTTGCATGCCAATGC
131 AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
* * * * **
16695459 CATTTTCATGGCTTGTAAATTCATATC-GTGGTCCCTTAAGCCTTCATGAT-AAGATTCATGAAA
196 CATTTTTATGGCTTGTAAATTCATA-CAATGGTCCCTTAAGCCTTCA-CATGAAGTTTCATGGCA
*
16695522 AGATGACTCGTTTTCTATTTTTCACGATTTTCAAAA-CTTTTT-A-C-GA-TTTT-CAAAACTTG
259 AGACGACTCGTTTTCTATTTTTCACGATTTTCAAAATCTTTTTAATCGGAGTTTTGCAAAACTTG
* * * *
16695581 GTAGACATGATCCTCGTATTTTTGTTGGCATGCACAAAAAAATTTAGCAAAAAACTCGAAGTGTA
324 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
16695646 CAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCA-TTCAAGACACTTTAATGGCTAGTGGCAGC
389 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGGCAGC
*
16695710 AAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTGAGGTTTGATGAGGTATAGG
453 AAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGTATAGG
* * *
16695775 GGGCCAATATAAGGGCCAAGCACCAGCACCCATCTCACATCATGTGCGCACACCCCCCAGCCCCT
518 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCCGGCCCCC
* * * * * * *
16695840 CGATCACCGAAACCGCAATGCCGTCAGTCAAGTTCTCCGGCGATGCTCCGGTGATGGTACCCC-A
583 CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGA
* * * * *
16695904 GTGAAGAAAAATGTTGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGTAACCTTCGATCC-
648 -CGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTTCGGTCCG
* * * * *
16695968 AGTCTGATCTTAGACTGGGAATTAACTCCGCATGCTTAGACTGGGAATGTACTCTGTATACCTAA
712 A-TCCGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * *
16696033 GTCAACCAACGAAACGAGCGTGCGTGCACTCAACCGGCCAAAGGGGTGGGATGTGTAAGCCGGGG
776 GTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * *
16696098 ATCGATCGAGTCCCCCTCTGCATGCTGCCAATC
841 ATCGGTCGGGTCCCCCTCTGCATGCTGCCGATC
*
16696131 CTGCTGCTGCAACCCTCAGTTC-GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
1 CTGCTGCCGCAACCCTCAGTTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * ** *
16696195 AACCGACAAAACGAGCGGACGGGCGGGCGAGCAGGCACTACACCAACCAGAGAGACGGGATGCAC
66 AACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * *
16696260 AAGCCGTGGATTGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
131 AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
* *
16696325 CATTTTTATGACTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACATGAAGTTTCATGGCAAG
196 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAG
*
16696390 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
261 ACGACTCGTTTTCTATTTTTCACGA-TTTTCAAA------A----TC-----TTTTT--AA----
* * * *
16696455 TTTGGAAGGAGTTTTGGCCCAAAACTTGGTTGACGTGATCCTTGTATTTCTATTGGCATGCACAA
304 --T---CGGAGTTTT-G--CAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
16696520 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
361 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
16696585 TCAGAAACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
426 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
* * * ** *
16696650 AGTTCTCAAGCTTTGATGAGGGATACAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
491 AGTTCTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCAC
*
16696715 ATCATGTGCGCACACCCCACCCGGCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCT
556 ATCATGTGCGCACA-CCC-CCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * * *
16696780 CCGGTGATGCTCCAGCGATGGTGCCCCGGCAAAGAAAAATATGGCACCAGCACATGCCCAAGCCC
619 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* * *
16696845 AG-ATGTGCTACCGCAACCCTT-GGTCTGATCTGATCTTAGACTGGGAATGAACTCCGCATGCTT
684 AGCATGTGCTGCCGCAA-CCTTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGCATGCTT
16696908 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGG
748 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGG
* * * * **
16696973 CCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGCGT-CCCCTTTGTGTGCTGCCGATC
813 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATC
* * * * *
16697033 CTACTGCCGTAACCCTCAGTT-TGATCCAATGTTAGACTGGGAATGAACTCCGTATGCGTAAGCC
1 CTGCTGCCGCAACCCTCAGTTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
16697097 AACCGACGAAACGAACGGGCAGGTGGGAGGGTGGGCACTATGCTGGCCAGAGAGACGGGATGCGC
66 AACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * * * * *
16697162 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTTTACGTGCAAAAGC
131 AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
*
16697227 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
196 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAG
* * *
16697292 ACGACCCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
261 ACGACTCGTTTTCTATTTTTCACGA-TTTTCAAA------A----TC-----TTTTT--AA----
* * * *
16697357 TTCGGATGGAGTTTTGGCCCCAAACTTGGTAGACATGAACCTTGTATTTTTGTTGGCATGCACAG
304 -TC----GGAGTTTT-G--CAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
16697422 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
361 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
16697487 TCAGACACTTTAATGGCTACTGGCAGCAAAGCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
426 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
*
16697552 ATTTCTCGAGGTTTGATGA-GTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCA
491 AGTTCTCGAGGTTTGATGAGGT-ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCA
* * *
16697616 CATCATGTGTGCACACCCCCTCCGGCCCCTCCGATCGCTGGAACCCCAATGCCGTCGGTCGGGTT
555 CATCATGTGCGCACA-CCCC-CCGGCCCC-CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* *
16697681 CTCCGGCGATCCTCCGGCGATGATGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGC
617 CTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGC
* * *
16697746 CCAGCATGTGCTGCCGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCT
682 CCAGCATGTGCTGCCGCAACCTTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGCATGCT
* * *
16697811 TCGACTGGAAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
747 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCG
* * * * * * * *
16697876 ACCAGAGGGGCGAGATGCGCAAGCCGGGGATCGATTGGGTACCCCTCTACGTGCTGTCGATC
812 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATC
* * * * * *
16697938 CTTCTGCCACAACCCT-TGATCTGGTCCAATCTTAGACTGGGAATGAACTCCCTATTCCTAAGCC
1 CTGCTGCCGCAACCCTCAGTTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * *
16698002 AATAGACGAAACGAAC--G-GGGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGACAGGATGCGC
66 AACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
*
16698064 AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTT-TCGCATGCCAATG
131 AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCT-GCATGCCAATG
* *
16698128 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTAATGGCA
195 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAG-TTTCATGGCA
*
16698193 AGACGACTCGTTTTCTATTTTTCATGATTTTCAGAACTTTTTACGGTTCAAGATTTTTTAAAATT
259 AGACGACTCGTTTTCTATTTTTCACGATTTTCA-AA------A----TC-----TTTTT--AA--
* *
16698258 TTTTCGGAAGGAGTTTTGGCGCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTAC
304 ---TC----GGAGTTTT---GCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * * *
16698323 AGAAAAATTCAGCTAAAAACTCGAAGTGTACACGATTTTGTGACCATTTTAAAAATGTGT-CCCA
359 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
16698387 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTG
424 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTG
* * * *
16698452 TGAGATCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCTC
489 TGAGTTCTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTC
* * *
16698517 ACATCATGTGCGCACACCCCCTGGCCCCCCCGATCGTCGGAACCCCGATGCCGTCGGTCAGGTTC
554 ACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
* * * * ** *
16698582 TCCGGTGATGCTCCAGCGATGGCGCCCCGACAAAGAAAAATACGACACCAGCACATGCCCGAGCC
618 TCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCC
* * * * *
16698647 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCTGTATGCTT
683 CAGCATGTGCTGCCGCAACCTTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGCATGCTT
* * * * **
16698712 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAGGAGCATGCGGGCGCTCCCCCGG
748 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGG
** * * *** * *
16698777 CCAGAGGGGTAGGACGCACAAGCTACGGATCGGCCGGGTCCCCCTCTACGA-GCTGCCGATC
813 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGC-ATGCTGCCGATC
* **
16698838 CTGCTGCCGCAACCCTC-GATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
1 CTGCTGCCGCAACCCTCAGTTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
16698902 AACCGATGAAATGAGCGGGCGGGCGGGTGGGTGGGCACTACGTCGGCTAGAGAGACGGGATGCGC
66 AACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
*
16698967 AAGCCGTGGATCAATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
131 AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
* *
16699032 CATTTTTATGGGTTGTAAATTCATACAATGGACCCTTAAGCCTTCACATGAAGTTTCATGGCAAG
196 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAG
* * * *
16699097 ACGACTGGTTTTCTTTTTTTCATGATTTTTGAAACTTTTTACAGTTCGAGATTTTTTAAAAATTT
261 ACGACTCGTTTTCTATTTTTCACGA-TTTT-CAA------A-A--TC-----TTTTT---AA---
* * * *
16699162 TTTGGAAGGCGTTTTGGCCCCAATCTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAA
304 -TCGG-A---GTTTT-G--CAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
16699227 AAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
361 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
16699292 TTAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
426 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
* * *
16699357 AGTTCTCGAGGTTTGATGA-GTGATAGGGGGCCAATACAAGGGCCAAGTACCAGCCCCCATCGCA
491 AGTTCTCGAGGTTTGATGAGGT-ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCA
* * *
16699421 CATCATGTGCGCACACCCCCCGACCCCCCCGATCGCCGGAA-CCCAATGCCGTCGATCATGTTCT
555 CATCATGTGCGCACACCCCCCG-GCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
** * *
16699485 CCGTTGATGCTCCGGCGATGGTGCCCCGACGAAG-AAAATGCGGCACCAGCACATGCCTGAGCCC
619 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* *
16699549 AGCATGTGCTGCCGCAACCCTT-GGTCCGATCCGATCTTAGACTGAGAATGAACTCCATACCACT
684 AGCATGTGCTGCCGCAA-CCTTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCC---GCA-T
* * *
16699613 GCCTTAGACTAGGAATG-ACTCCGTATG-CTAGGTCAACCCATAGAAA-GACGCCGTGCGGGCAC
744 G-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA-CGAAACGA-G-CGTGCGGGCAC
**** * * *
16699675 TCA-AATACCAGAGGGGCGGGATGCGTAAGCCGAGGATCGGTCGGGTCCCCCTCTGCATGCTGTC
805 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCC
*
16699739 AATC
870 GATC
* * * *
16699743 TTGCTACCGCAACCCTCAG-TCCGGTCCGATCGTTAGACTGGGAATGGAACGTCCGTATGCCTAA
1 CTGCTGCCGCAACCCTCAGTTCTGGTCCAATC-TTAGACTGGGAAT-GAAC-TCCGTATGCCTAA
* * ** * * ***
16699807 G-CGACC-ACAAAACGAGTGGGTGGGCAGGCGGGGCGGGCTCACTACGGTTAGCCAGAGAGGACG
63 GCCAACCGACGAAACGAACGGGCGGGCGGGC-GGGCGGG--CACTAC-GCCGGCCAGAGA-GACG
* * *
16699870 GGTAGTGCGC-AGCCATGGATCGATAGGGTGG-CAAGTGGGTTTAGGTACATCTTCATACTTCTG
123 GG-A-TGCGCAAGCCGTGGATCGATAGGGTGGTC-GGTGGGTTTAGGTACATCTTCATATTTCTG
*
16699933 CGTGCC
185 CATGCC
16699939 CCGACGATGG
Statistics
Matches: 4071, Mismatches: 480, Indels: 232
0.85 0.10 0.05
Matches are distributed among these distances:
865 9 0.00
866 660 0.16
867 69 0.02
870 4 0.00
871 2 0.00
873 1 0.00
876 1 0.00
878 1 0.00
882 1 0.00
883 5 0.00
885 5 0.00
886 1 0.00
890 1 0.00
895 1 0.00
897 5 0.00
898 72 0.02
899 2 0.00
900 324 0.08
901 98 0.02
902 1467 0.36
903 739 0.18
904 267 0.07
905 172 0.04
906 55 0.01
907 14 0.00
908 14 0.00
909 7 0.00
910 9 0.00
911 7 0.00
912 53 0.01
913 5 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (873 bp):
CTGCTGCCGCAACCCTCAGTTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
AACCGACGAAACGAACGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
AAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAG
ACGACTCGTTTTCTATTTTTCACGATTTTCAAAATCTTTTTAATCGGAGTTTTGCAAAACTTGGT
AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGTATAGGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCCGGCCCCCCGA
TCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGA
AGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTTCGGTCCGATCC
GATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
CCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
TCGGGTCCCCCTCTGCATGCTGCCGATC
Found at i:16696915 original size:26 final size:26
Alignment explanation
Indices: 16696879--16696931 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16696869 CTGATCTGAT
16696879 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
*
16696905 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
16696931 C
1 C
16696932 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:16698721 original size:26 final size:26
Alignment explanation
Indices: 16698683--16698735 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16698673 CCGGTCCGAT
*
16698683 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16698709 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16698735 C
1 C
16698736 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16702525 original size:26 final size:26
Alignment explanation
Indices: 16702496--16702548 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16702486 CCGATCTGAT
16702496 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
16702522 CTTAGACTGGGAATGAAGTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16702548 C
1 C
16702549 CTAAGTCAAT
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16703269 original size:903 final size:898
Alignment explanation
Indices: 16701035--16703425 Score: 3407
Period size: 899 Copynumber: 2.7 Consensus size: 898
16701025 GGATCAGCCT
* * *
16701035 TGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTCAAGTGAGGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTT
*
16701100 CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTGGCGGTTCGAGATTTTT
66 CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTT
** * * *
16701165 TAAAATTTTTTCGGAAGGAGTTTTGG-CATAAACTTGGTAGACGTGATCCTTGTTTTTTTCTTGG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGTTGG
* * * * *
16701229 CATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTTCAATATTTTGTGACCATTTGAAAAAAAT
196 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
16701294 GTCCCCATTTCTGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAG
261 GTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
16701359 GGGGGTGTGAGTTCTCGAGGTTTTATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCAC
326 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * *
16701424 CCATCGCACATCATGTGCGCACACCACCCCGCCCCCCCGATCGTCGGAACCCCAACGCCGCCGGT
391 CCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCCGATCGTCGAAACCCCAATGCTGCCGGT
* * * *
16701489 CAGGTTCTCCGGCGATGCTTTCAACGATGGTGCCCCGACGAAGAAAAATGCAGCACTAGGACATG
455 CAGGTTCTCCGGCGATGC-TCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACAAGCACATG
* * ** * * *
16701554 CACGAGCCCAGTATGTGCTA-CCGTAACCCTCGATCCAATCTGATCTGAGACTGGGAATGAACTC
519 CCCGAGCCCAGCATGTGC-AGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTC
* * * *
16701618 CATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGGAACAAGCGTGCAGGCG
583 CGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACAAGCGTACAGGCG
* * * * * * * *
16701683 CTCGGCCAGCCGGATGGGCGAGATGCGCAAGTCGGGGATCGACCAGGTCCCCCTCTGCGTGTTGT
648 CTCAGCCAGCCAGATGCGCGAGATGCACAAGCCGGGGATCGACCAGGTCCCCCTCTACATGCTGT
* ** *
16701748 CGATCCTACTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
713 CGATCCTACTACCGCAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTA
* *
16701813 AGCCAATCGACGAAACAAGCGAGCGGGCGGGCGGGCACAACACCGGCTAGAGAGACGAGATGCGC
778 AGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACAACACCGGCCAGAGAGACGAGATGCGC
* * * *
16701878 AAGCCGTGGATCGATAGGGTGGTAGGTGTGTTTAGGTACATCTTCATATTTTTGCG
843 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* * *
16701934 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCCTCATGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTT
*
16701999 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTT
66 CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTT
* * *
16702064 TAAAATTTTATCGGAAGGAGTTTTGGCCCCAAACTT-TTAGGCGTGAT-CCTCGTATTTTTGTTG
131 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCT-GTATTTTTGTTG
16702127 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
195 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * * *
16702192 TGCCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTATAAAATCTCAATTGCTCTTTA
260 TGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
16702257 AGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCA
325 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * *
16702322 CCCATCACACATCATGTGCGGACACCCCCCGGCTCCCCCGATCGTCGAAACCCCAATGCTACCGG
390 CCCATCGCACATCATGTGCGCACACCCCCCGGC-CCCCCGATCGTCGAAACCCCAATGCTGCCGG
** *
16702387 TCAGGTTCTTTGGCGATGCTCCGACGATCGTGCCCCGACGAAGAAAAATGCAGCACAAGCACATG
454 TCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACAAGCACATG
* *
16702452 CCCGGGCCCAGCATGTGCAGTCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCC
519 CCCGAGCCCAGCATGTGCAGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCC
* * * * *
16702517 GTATGCTTAGACTGGGAATGAAGTCTGTATGCCTAAGTCAATCCACGAAACGAGCGTACGGGCTC
584 GTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACAAGCGTACAGGCGC
* * * **
16702582 TCAGCCGGCCAGA-GCGCTGGGATGCACAAGCCGGGGATCGGCGGGGTCCCCCTCTACATGCTG-
649 TCAGCCAGCCAGATGCGC-GAGATGCACAAGCCGGGGATCGACCAGGTCCCCCTCTACATGCTGT
* *
16702645 CTGATCCTGCTACCGCAACCCTCGGTCCGGTCCAATCTTATACTAGGAATGAACTCCGTATGCCT
713 C-GATCCTACTACCGCAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCT
* * * *
16702710 AAGCCAACCGACGACAC-AGCGGGCGGGTGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGA
777 AAGCCAACCGACGAAACAAGCGAGC----GGGCGGGCGGGCACAACACCGGCCAGAGAGACGAGA
*
16702774 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTCGGCACATCTTCATATTTCTGCA
838 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
16702835 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTT
1 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTT
* * * ** * *
16702900 CACGGCAAGATGACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTT
66 CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGA-TTTT
* * * * *
16702965 TTAAACTTTTTTAGGGAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCCTATATTTTTGTTG
130 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGTTG
16703030 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
195 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
16703095 TGTCCCCATTTCAGACACTTTAATGGCTACTAGTAACAAACTTGTAAAATCTCAAATGCTCTTTA
260 TGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * *
16703160 AGAGGGTGTGAGTTCTCGA-GTTTCGATGAAGGATAGGGGGCCAATATAAGCGCCAAGTACCAGC
325 AGGGGGTGTGAGTTCTCGAGGTTT-GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * ** *
16703224 ACCAATCGCACATCATGTGCGTACACCCCCCGGCCCTTTCGATCGTC-AGAACCTCAATG-TCGC
389 ACCCATCGCACATCATGTGCGCACACCCCCCGGCCC-CCCGATCGTCGA-AACCCCAATGCT-GC
* * * * *
16703287 CGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCAC
451 CGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACAAGCAC
* * * * **
16703352 ATGCCCGAGCCCAGCATGTGCTGCCACAACACTTGGTCCGGTCCAATCTTAGACTGGGAATGAAC
516 ATGCCCGAGCCCAGCATGTGCAGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAAC
*
16703417 TTCGTATGC
581 TCCGTATGC
16703426 CTAAGTCAAC
Statistics
Matches: 1325, Mismatches: 150, Indels: 30
0.88 0.10 0.02
Matches are distributed among these distances:
897 11 0.01
898 277 0.21
899 413 0.31
900 7 0.01
901 203 0.15
902 45 0.03
903 366 0.28
904 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (898 bp):
TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTT
CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTT
TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGTTGG
CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
GTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCTGCCGGTC
AGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACAAGCACATGCC
CGAGCCCAGCATGTGCAGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGT
ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACAAGCGTACAGGCGCTC
AGCCAGCCAGATGCGCGAGATGCACAAGCCGGGGATCGACCAGGTCCCCCTCTACATGCTGTCGA
TCCTACTACCGCAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGC
CAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACAACACCGGCCAGAGAGACGAGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
Found at i:16703726 original size:185 final size:185
Alignment explanation
Indices: 16703399--16703750 Score: 481
Period size: 185 Copynumber: 1.9 Consensus size: 185
16703389 CCGGTCCAAT
* * * *
16703399 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAGC
* * * * *
16703464 CGGCCAGAGGGGCAAGATGTGCAAGCCGGGGATCAGCCGAGTCTCCCTCTGCGTGCTGTCGATCT
66 CGACCAGAGGGGCAAGATGCGCAAGCCGGGGATCAGCCGAGTCCCCCTCTGCGTGCTGCCGATCC
16703529 TGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTTTGACTGAACTCCATATG
131 TGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTTTGACTGAACTCCATATG
* ** *
16703584 CTTAGACTGGGAATGAACTCCATATGCCTAAGTGAACCCACGAAACGAGCGTGCGAGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAGC
*** * * *
16703649 CGACCAGAGGGGTGGGATGCGCAAGTCGGGGAT-TGACCGGGTCCCCCTCTGCGTGCTGCCGATC
66 CGACCAGAGGGGCAAGATGCGCAAGCCGGGGATCAG-CCGAGTCCCCCTCTGCGTGCTGCCGATC
* * **
16703713 CTGGTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACT
130 CTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACT
16703751 GAGAATAAAC
Statistics
Matches: 143, Mismatches: 23, Indels: 2
0.85 0.14 0.01
Matches are distributed among these distances:
184 1 0.01
185 142 0.99
ACGTcount: A:0.21, C:0.28, G:0.29, T:0.22
Consensus pattern (185 bp):
CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAGC
CGACCAGAGGGGCAAGATGCGCAAGCCGGGGATCAGCCGAGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTTTGACTGAACTCCATATG
Found at i:16704734 original size:495 final size:495
Alignment explanation
Indices: 16703804--16704792 Score: 1653
Period size: 495 Copynumber: 2.0 Consensus size: 495
16703794 GGCGGGCAAG
* * * *
16703804 CACTACGTCGGTCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGTGTTTAG
1 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGTCTTTAG
* *
16703869 GTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATCCATACAATGGTCCT
66 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCTTGTAAATCCATACAATGGTCCT
*
16703934 CTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTTAAAAC
131 CTAAGCCTTCACATGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCAAGATTTTTAAAAC
* ** *
16703999 TTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGAAGTTTTAGCCGTAAACTTGGTAGACG
196 TTTTTACGGTTCGAGATTTTTTAAAAATTTTTTGGAAGAAGTTTTAGCCCCAAACTTGATAGACG
* *
16704064 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGTTAAAAACTCAAAGTGTACAAGATT
261 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATT
*
16704129 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACTGGCAGCAAACTGT
326 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACTGGCAGCAAACTAT
16704194 AAAATGTCAAATGCTCTTTAATGGGGAATGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
391 AAAATGTCAAATGCTCTTTAATGGGGAATGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
*
16704259 ATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCA
456 ACAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCA
*
16704299 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGTTGGTAGGTGTCTTTAG
1 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGTCTTTAG
16704364 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCTTGTAAATCCATACAATGGTCCT
66 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCTTGTAAATCCATACAATGGTCCT
* * * *
16704429 TTAAGCCTTCACGTGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
131 CTAAGCCTTCACATGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCAAGATTTTTAAAAC
* * *
16704494 TTTTTACGGTTCGGGATTTTTTAAAAATTTTTTGGAAGGA-TTTTGGGCCCCAAACTTGATAGAC
196 TTTTTACGGTTCGAGATTTTTTAAAAATTTTTTGGAAGAAGTTTT-AGCCCCAAACTTGATAGAC
* *
16704558 GTGATCCTTGTATTTTTGTTGGTATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
260 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
16704623 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTT-AGACACTTTAATGGCTACTGGCAGCAAACCT
325 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACTGGCAGCAAA-CT
** *
16704687 ATAAAACT-TCAAATGCTCTTTAA-GAGGGTGTGATTTCTCAAGGTTTGATGAGGGATAGGGGGC
389 ATAAAA-TGTCAAATGCTCTTTAATG-GGGAATGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
*
16704750 CAATACAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
452 CAATACAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
16704793 GCACACCCCC
Statistics
Matches: 461, Mismatches: 29, Indels: 8
0.93 0.06 0.02
Matches are distributed among these distances:
494 33 0.07
495 427 0.93
496 1 0.00
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (495 bp):
CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGTCTTTAG
GCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCTTGTAAATCCATACAATGGTCCT
CTAAGCCTTCACATGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCAAGATTTTTAAAAC
TTTTTACGGTTCGAGATTTTTTAAAAATTTTTTGGAAGAAGTTTTAGCCCCAAACTTGATAGACG
TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACTGGCAGCAAACTAT
AAAATGTCAAATGCTCTTTAATGGGGAATGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
ACAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCA
Found at i:16706596 original size:26 final size:26
Alignment explanation
Indices: 16706567--16706619 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16706557 CCGATCCCAT
16706567 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
16706593 CTTAGCCTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16706619 C
1 C
16706620 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16706928 original size:890 final size:887
Alignment explanation
Indices: 16704885--16709303 Score: 5524
Period size: 904 Copynumber: 4.9 Consensus size: 887
16704875 GTGAAGATAA
* ** * * * *
16704885 ATGCGCAAGCCGGGGATTGGTC-GACCCCCCTTTACGTGCTGTCAATCC-AGCTGCCACAACCCT
1 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTA-CTGCCACAACCCT
* * * *
16704948 CAGTCTGATCCGATCTTAGACTGGGAATTAACTCCGTATGCCTAAGCCAACCGACGAAACGAACG
65 CAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A--AAC-
* * * * * *
16705013 GGTGAACGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCACAAGCTGTGGATAGATAG
125 ----AA---GCAGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* * * * * **
16705078 GGTGGTACGTGGCTTCAGGCACATCTTCATATTTGTGTGTGCCAATGCCATTTTTATGGCTTGTA
183 GGTGGTAGGTGGGTTTAGGCACATCTTCATATCTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* *
16705143 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATT
248 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * *
16705208 TTTCACAATTTTTGAATCTTTTTGCGGTTCGGGATTTTTTTAAAATTTTCTCAGAAGGAGTTTTG
313 TTTCACCATTTTTGAAACTTTTTGCGGTTCGGGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTG
** *
16705273 GCTTCAAACTT-GTAGACGTGATCCTTGTATTTTTATTGGTATGCACAAAAAATTTCAGCTAAAA
377 GCACCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAA-TTCAGCTAAAA
*
16705337 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGG
441 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * *
16705402 CCACTAGTAGCAAACCTGTAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGTTC-CTGAGGTTTG
506 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGGTTTG
* * * *
16705466 ATGAGGTATA-GGGGCCAATATAAGAGCCAAGTACAAGCACCCATCACACATCATGTACGCACAC
570 ATGAGG-ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
* * * * ** * *
16705530 CCCTCCGG-CCCCCGATCGTCGGAACTCCAATGCCATCGGTCGGGTTCTCCGATGATGCTCTGGC
634 CCC-CCGGCCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGAC
* * * * *
16705594 GATCGTGCCCCGAAGAAGATAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCA
698 GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC-GCA
* * * *
16705659 ACCCTCGGTCCGGTCCTATCTTAGACTGGGAATGAACTCTGTATGCTTAGAATGGGAATGAACTC
762 ACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * * * *
16705724 CGCATACCTAAGTCGACCGATGAAACGAGCATGCGGGCGCTCAACCGACCAGAGGGGTGGG
827 CGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAACCGGCCAGAGGGGCGGG
* * * * * *
16705785 ATGCACAAGCCGGGGATTGGTCGAGT-CCCCTCTGCCTACTGTCGATCC-AGCTGCCACGACCCT
1 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTA-CTGCCACAACCCT
* * * *
16705848 CAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCGAAGCGAACCAACGAAACGAGCA
65 CAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCA
* * *
16705913 GGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAAGCCATGGATCGATAGGGTGGTAGGTGG
130 GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
16705978 GTTTAGGCACATCTTCATATCTCTGCTTGCCAATGCCATATTTATGGCTTCTAAATTCATACATT
195 GTTTAGGCACATCTTCATATCTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
16706043 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTT
260 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTT
* * * *
16706108 TGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGTATTTTTCGAACCAAACTTGG
325 TGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCACCAAACTTGG
* * *
16706173 TAGACGTGATCCTTGTATTTTTTTTGGCACGCACAAAAAACTCAGCTAAAAACTCGAAGTGTACA
390 TAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
16706238 AGATTTTTTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
455 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * *
16706303 CCTATAAAATCTCAAATGCTCTTTATGGGGTTGTGGGTTC-CTGAGGTTTGATGACGGATAGGGG
520 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGA-GGATAGGGG
*
16706367 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCTT
583 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC-C
* * * **
16706432 GATCATCAGAACCCCAATACCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCTCGGT
647 GATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGAC
*
16706497 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTTGGTCCGAT
712 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CGCAACCCTCGGTCCGAT
* * *
16706562 CCCATCTTAGACTGGGAATGAACTCCGTATGCTTAGCCTGGTAATGAACTCCGTATGCCTAAGTC
776 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * *
16706627 AACCCACGAAATGAGCATGCGGGCGCTTAGCCGGCTAGGGGGGCGGG
841 AACCCACGAAACGAGCATGCGGGCGCTCAACCGGCCAGAGGGGCGGG
* * *
16706674 ATGCGCAATCCGAGGATCAGTCGGGTCCCCCTCTGCATGCTGTCGATCCTACTGCCACAACCCTC
1 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTACTGCCACAACCCTC
* * * * *
16706739 GGTCCGGTCTGATCTTAGACTGGAAATAAACAT-CGTATGCCTAAGCGAACCGATGAAACAAGCA
66 AGTCCGGTCTGATCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGCCAACCGACGAAACAAGCA
* * * * *
16706803 GGCGGGCACTACGTCGGCTAGAGAGATGGGATGCGTAAGCCGTAGATCGATAGGGTGATAGGTGG
130 GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
16706868 GTTTATGCACATCTTCATATCTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
195 GTTTAGGCACATCTTCATATCTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
16706933 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTT
260 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTT
* * * * * * * *
16706998 TGAAACCTTTTGTGATTCGAGATTTTTTAAAATTTGTTCAGAAGGATTTTTGGAACCAAACTTGG
325 TGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCACCAAACTTGG
* * * * *
16707063 TAGTCGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCATCTAAAAACTCGGAGTGTAC
390 TAGACGTGATCCTTGTATTTTTATTGGCATGCA-CAAAAAATTCAGCTAAAAACTCGAAGTGTAC
16707128 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
454 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
16707193 ACCTGTAGAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
519 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGATAGGGG
** *
16707258 GAAAATATAAGGGACAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCTCC
583 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCC-CC
** *
16707323 CGATTGTCGGAACCCCAATGCCG-CTGGTCAGGTTCTCCGGCGATACTCCGACGATGGTGCCCCG
646 CGATCATCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCG
* * * * * *
16707387 ACGAAGAAAAATGTGGCACCAGCACATGCCTGAGGCCAACATGTGCAGCTGCAACACTCGGTCCG
710 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC-GCAACCCTCGGTCCG
* * *
16707452 ATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGCCTAAG
774 ATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
16707517 TCAACCCACGAAATGAGCGTGCGGGCACTCAACCGGCCAGAGGGGTGGG
839 TCAACCCACGAAACGAGCATGCGGGCGCTCAACCGGCCAGAGGGGCGGG
* ** ** * *
16707566 ATGCGTAAGCCGGGGATCGACCGGGTCCCCCTCTGTGTGCTGTCGATCCTGCTGCCGCAACCCTC
1 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTACTGCCACAACCCTC
* *
16707631 AATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGG
66 AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAA----
* * *
16707696 GTGGGCGGGCAGGCGGGAACTACTTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGG
127 --------GCAGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
*
16707761 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
184 GTGGTAGGTGGGTTTAGGCACATCTTCATATCTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
*
16707826 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTA
249 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
** * ** * * *
16707891 TTCATGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAACATTTTTTTGAAAGGAGTTTTGGC
314 TTCACCATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
* * * *
16707956 CCCAAACTTGGTAGACGTTATCCTTGTATTTTTATTGGCATGCAAAAAAAAATTTAGCTAAAAAC
379 ACCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGC-ACAAAAAATTCAGCTAAAAAC
*
16708021 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCT
443 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * * * *
16708086 TCTAGAAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
508 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * *
16708151 AGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATTC-CACATTATGTACGCACACCC
573 A-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-TCGCACATCATGTGCGCACACCC
* * * *
16708215 CCCGGACCCCCCCGATC-GCTGGAAACCCAATGCTGTCGGTCAAGTTCTCTGGCGATGCTTCGAC
636 CCCGG--CCCCCCGATCATC-GGAACCCCAATGCCGTCGGTCAGGTTCTC---C---G----G-C
* * * * * *
16708279 GATGCTCCGACGATGGAGCCTCGGCAAAGGAAAATGCGGCACCAGCACATGCTCGAGCCCAGCAT
687 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * * *
16708344 GTGCTGCCACAACCTTCGGT-CTAGTCTGATCTTAGACTGGAAATGAACCCCGTATGCTTAGACT
752 GTGCTG-CGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
** * ** * *
16708408 GGGAATGAACTCCGTATGCCTAAGTCAACCCGTGAAACGAGCGTGCGGATGCTCAGCCAGCCAGA
815 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAACCGGCCAGA
16708473 GGGGCGGG
880 GGGGCGGG
*
16708481 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT--A--C-GT-G---CTA---CCGCAACCCTC
1 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTACTGCCACAACCCTC
* * ** * * *
16708534 GGTCTGGTGAGATCTTAGACTGGGAATGAACTCCATATGCGTAAGCCAACCGACGAAACGAGCGG
66 AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-A---A
* * * * *
16708599 GCGGGCGGGCACTACGCCGGCCAAAGAGATGGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGG
127 GCAGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
*
16708664 TGGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGTGTGTCAATGCCATTT
192 TGGGTTTAGGCACATCTTCATA--TCT-C-TG-C-ATG-C--------------CAATGCCATTT
* *
16708729 TTATGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGAC
236 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * *
16708794 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCAGTTCGGGATTTTTTAAAATTTTTTCGA
301 TCGTTTTCTATTTTTCACCATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
16708859 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
366 AAGGAGTTTTGGCACCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCAC-AAAAAA
*
16708924 TTCAGCTAAGAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
430 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * * *
16708989 CACTTTAACGGCTACAGGTAGCAAACCTGTAAAATCTCCAATGCTCTTAAAGGGGGTGTGAGTTC
495 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
16709054 TCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCAT
560 TCGAGGTTTGATGAG-GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
16709119 GTGCACACACCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGCCCGTCAGGTTCTCCGACGA
624 GTGCGCACACCCCCCGGCCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
* * * *
16709184 TGCTCCGAGGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGTCTGAGCCCAGCATGT
689 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* *
16709249 GCTGTCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
754 GCTG-CGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
16709304 CTAAGCCAAT
Statistics
Matches: 3079, Mismatches: 362, Indels: 153
0.86 0.10 0.04
Matches are distributed among these distances:
887 172 0.06
888 294 0.10
889 224 0.07
890 360 0.12
891 204 0.07
892 325 0.11
893 2 0.00
895 78 0.03
896 3 0.00
897 2 0.00
898 2 0.00
899 2 0.00
900 102 0.03
901 3 0.00
902 1 0.00
903 170 0.06
904 496 0.16
905 7 0.00
906 2 0.00
907 1 0.00
908 1 0.00
909 1 0.00
910 3 0.00
911 2 0.00
914 37 0.01
915 203 0.07
916 382 0.12
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (887 bp):
ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTACTGCCACAACCCTC
AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCAG
GCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
TTTAGGCACATCTTCATATCTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTTT
GAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCACCAAACTTGGT
AGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
ATCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAG
AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCGCAACCCTCGGTCCGATCCGAT
CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
ACGAAACGAGCATGCGGGCGCTCAACCGGCCAGAGGGGCGGG
Found at i:16707488 original size:26 final size:26
Alignment explanation
Indices: 16707459--16707511 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16707449 CCGATCCAAT
* *
16707459 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
16707485 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
16707511 C
1 C
16707512 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:16708414 original size:26 final size:26
Alignment explanation
Indices: 16708374--16708426 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16708364 CTAGTCTGAT
16708374 CTTAGACTGGAAATGAACCCCGTATG
1 CTTAGACTGGAAATGAACCCCGTATG
* *
16708400 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACCCCGTATG
16708426 C
1 C
16708427 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACCCCGTATG
Found at i:16710885 original size:26 final size:26
Alignment explanation
Indices: 16710849--16710901 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16710839 CCGATCCGAT
*
16710849 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16710875 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16710901 C
1 C
16710902 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16711747 original size:26 final size:26
Alignment explanation
Indices: 16711711--16711763 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16711701 CTGATCCAAT
*
16711711 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16711737 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16711763 C
1 C
16711764 CTAAGTCAAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16712641 original size:26 final size:26
Alignment explanation
Indices: 16712605--16712657 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16712595 CTGGTTCAAT
16712605 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16712631 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16712657 C
1 C
16712658 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16713538 original size:26 final size:26
Alignment explanation
Indices: 16713502--16713554 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16713492 CTGGTCCAAT
16713502 CTTAGACTGGGAACAAACTCCGTATG
1 CTTAGACTGGGAACAAACTCCGTATG
* **
16713528 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACAAACTCCGTATG
16713554 C
1 C
16713555 CCAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACAAACTCCGTATG
Found at i:16715301 original size:26 final size:26
Alignment explanation
Indices: 16715265--16715317 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16715255 CTGGTCTGAT
* *
16715265 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAAAGAACTCCATATG
*
16715291 CTTAGACTGGGAAAGAACTCCATATG
1 CTTAAACTGGGAAAGAACTCCATATG
16715317 C
1 C
16715318 CTATGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.21, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAAACTGGGAAAGAACTCCATATG
Found at i:16716595 original size:871 final size:868
Alignment explanation
Indices: 16709248--16718354 Score: 10526
Period size: 894 Copynumber: 10.4 Consensus size: 868
16709238 GCCCAGCATG
* * **
16709248 TGCTGTCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
16709313 TCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
66 CCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * *
16709378 TGGATCGATAGGGTGTTAGGTGGGTTTAAGAACATCTTCATATTTCTACATGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * *
16709443 TATGGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
16709508 CATTTTCTATTTTTCATGATTTTTGAAACTTTATACAGTTCGGGATTTTTTAAAATTTTTTCGGA
261 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
* * * *
16709573 AGGTGTTTTGGCCCTAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
326 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
16709638 TCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
391 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
16709703 ACTTTAATGGCTATTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAACGGGGTGTGAGTTCT
456 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
16709768 CGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCGCATATCATG
521 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* *
16709833 TGCGCACACCACTCCCCGGCCCCCCCGACCGCTGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
586 TGCG--CA-CA--------CCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
** * *
16709898 CGATGCTCTTGTGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCA
640 CGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
*
16709963 TGTGCTGCCGCAACCCTCGGTCT-GATCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAA
705 TGTGCTGCCGCAACCCTCGGTCTGGGTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *** ** **
16710025 GTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGATTAGAATGGCGGGATGCGCAAGCCGAAG
770 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* ** * *
16710090 ATCGACCGAATCCCTCTCTGTGTGCTGCCGATCC
835 ATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * * * *
16710124 TGCTGCCACAACCCTTGGTCCGGTCTGATCTTTGATTGGGAATGAACTACGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16710189 CCGATGAAACGAGCA----GGCAGGCGGGCACTACACCGACCAGAGAGACGGGATGCGCAAGCCG
66 CCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
16710250 TGGATCGATAGGGTGGAAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCGAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
**
16710315 TATGGCTTGTAAATTCAGCCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
16710380 CGTTTCCTATTTTTCATGATTTTCGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTTGGA
261 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
* * * * *
16710445 TGGAGTTTTGGTCCCAAACTTGGTAGATGTGGTCATTGTATTTTTGTTGGCATGCACAAAAAAA-
326 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
16710509 TCAGCTAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGAC
391 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
16710574 ACCTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGCGTGTGAGTTCT
456 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * * ***
16710639 CGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACTAGTA-CCATCGCACACCCCC
521 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * ** ** * * **
16710703 T-CG---ACCCCCTCGATCGTCAGAATACCAATGCTACCGATCAGGTTGTCCAACGATGCTCCGG
586 TGCGCACACCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGG
* * * * *
16710764 TGATGGTGCCCTGACGAAGAAAAATGCAGCACCAGCCCATGCTCGAGCCCAGCATGTGCTGCCAC
651 TGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
16710829 AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
716 AA-CC-C--T-CG----G----T---CTGGG--T---C-C-GTATGCTTAGACTGGGAATGAACT
* * *
16710894 CCGTATGCCTAAGTCAACCCACG-AACGAGCGTGCGGACGCTCAATCGGCCAGAGGGGCGAGATG
758 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATG
* * **
16710958 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACTAATCC
823 CGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
16711004 TGCTACCACAACCCTCAATCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGACTAGGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*** * * *
16711069 CCGACGAAACGAGCA----GGC---AATG-AC-A-A-TGG-CA-A-TGATGGGATGCGCAAGCCG
66 CCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
16711120 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
16711185 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCCAGACGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
16711250 CGTTTTCTAGTTTTCATGATTTTTTAAACTTTTTGCGATTCAGGATTTTTTAAAATTTTTTCGGA
261 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
*
16711315 AGGAGTTGTT-GCCCCAAACTTGGTAGACGTGATGCTTGTATTTTT-TTGGCATGCACAAAAAAA
326 AGGAGTT-TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16711378 TTCATCGAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
390 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
16711443 CACTTTAATGGCTACTGGCAGCAAGCCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
455 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16711508 TCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
520 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
16711573 GTGCGCACACCCCCCTCGGCCCCCCCGATCACCGAAACCCCAATGTCGTCAGTCAGGTTCTCTGG
585 GTGCGCACA----------CCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * *
16711638 CGATGCTCTGGTGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCTCGAG-CC-G-G
640 CGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * ** * ** ** *
16711700 TCTGAT-CCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGC
705 TGTGCTGCC--GC-AACCCTCGGTCTG-GGTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * * * * * * **
16711764 CTAAGTCAAACCATGAAACGAACGTACAGGCACTCAGTCGGCCAGAGGGGTGGGATGCGTAAGTT
766 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCC
** * *
16711829 GGGGATCGGCCGGGTCCCCCTCTGCATGCTGACGATCC
831 GGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
16711867 TGCTGCTGCAACCCTCGGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * *
16711932 CCAACGAAA--TG-A-GC-GGCGGGCGGGCACTACGTCAGCCAGAGAGACGGGTTGGGCAAGCCG
66 CCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
*
16711992 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
16712057 TATGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACT
196 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
16712122 CGTTTTCTATTTTTCACGATTTTTGAAAGTTTTTACGGTTCGGGATATTTTAAAATTTTTTTGGA
261 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
* *
16712187 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCCTGCACAAAAAAAT
326 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
16712252 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTCCAGAC
391 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* **
16712317 ACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAACTGGGTGTGAGTTCT
456 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * * * **
16712382 TGAGGTTTGATGAGGGATAGGGGGCCAATATAATGGCCAAGTACTAGGACCCATCCCGTATCATG
521 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
16712447 TGCGCACATCCCTCGGCCCTCCCGATCACCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
586 TGCGCACA-----C--CCC-CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
* * * *
16712512 TGCTCCTGTGATGGTGCCTCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGTATGT
643 TGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
*
16712577 GCTGCCGTAACCCTCGGTCTGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
708 GCTGCCGCAA-CC-C--TC-GG--------T---CT-GG---G---TCCGTATGCTTAGACTGGG
* * * *
16712642 AATGAACTCCGTATGCCTAAGTCAACCCGCGAAACGAGCGTGCGGGCGCTCAGCCAGCCATAGGG
750 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGG
** ** * *
16712707 GCGGGATGCGCAAATCGGGGATCGGCCGGGTCCCCCTCTACATGCTGCCGATCC
815 GCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
16712761 TGCTGCCGTAACCCTCAGTCTAGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * **
16712826 CTGACGAAACGAGCAGGCGGACGGGCGGGCAGGCGGGTACTACGCCGGCCAGAGATACAAGATGC
66 CCGACGAAACGAGCAGGCGGGCGGGCGGGCA--C---TAC-A--CCGGCCAGAGAGACGGGATGC
* *
16712891 GCAAGTCGTAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
123 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
* *
16712956 GCCATTTTTATGGCTTGTAAATTCCTACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCA
188 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* *
16713021 AGACGACTCGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGGGACTTTTTAAAATT
253 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATT
* * * * * *
16713085 TTTTCAGAAGGAGTTTTGGCCTCAAATTTGGTAGACGTGATCCTTGTATTCTTATTGGCGTGCAC
318 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* *
16713150 -AAAAAATTGAGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
383 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
16713214 TTTTAGACAC--T--T---TACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTG
448 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* **
16713272 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACTAATCGC
513 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * *
16713337 ACATCTTGTGGGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCGATGCCGCTGGTCAGGTTCT
578 ACATCATGTGCGCACA-----C--CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
** * ** * * *
16713402 CCGGCGATGCTCTTGCGATGGTGCCCCGGTGAAGAAAAA-GACGGCACTAGCGCATGCTCGAGCC
636 CCGGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATG-CGGCACCAGCACATGCCCGAGCC
* * *
16713466 TAGCATATGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAACAAACTCCGTATGCTT
700 CAGCATGTGCTGCCGCAA-CC-C--TC-GG--------T---CTGGG-------TCCGTATGCTT
* * * *
16713531 AGATTGGGAATGAACTCCGTATGCCCAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGG
742 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGG
* * * * *
16713596 CCGGAGGGGTGGGATGTGCAAGCTGTGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
807 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
16713658 TGCTGCCGCAACCCTCGGT-TCAGTTTGATCTTACATTGGGAATGAACTCCGTCTGCCTAAGCCA
1 TGCTGCCGCAACCCTCAGTCT-GGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * * *
16713722 ACCGATGAAAC--G-A-GCGGGCGACCGGGCACTACACCGACCAAAGAAACGGGATACGCAAGCC
65 ACCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCC
*
16713783 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTT
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * *
16713848 TTATGGCTAGTAAATTCAGACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
195 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
16713913 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG
260 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGG
* * *
16713978 AAAGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAA
325 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16714043 TTCAGCTAAAAACTCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAAGTGTCCCCATTTTAG
390 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAG
* * * * *
16714108 ACACTTTAATAGTTACTGGCAGCAAACCTGTAAAATCTTAAATGGTCTTTAAAGGGGTGTGAGTT
454 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
16714173 CTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
519 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
16714238 TGTGCGCACACCCCCCTGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATGCTCC
584 TGTGCGCACACCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCC
** * * ** *
16714303 GACGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTTGCATGTGCT-AC
649 GGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
*
16714367 GCAACCCTCGGTCT-GGTCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
714 GCAACCCTCGGTCTGGGTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * * *
16714429 CGAAAAGAGCGTACAGGCGCTCAGCCGGTCAGAGGGGCGAGATGCGCAAGTCGGGGATCGATCGG
779 CGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGG
* * * *
16714494 GTCCCCCTCTGTGTGCTACCAATCT
844 GTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
16714519 TGCTACCGCAATCCTCAGTCTGATTCGATCTTACACTGGGAATGAACTCCGTATACCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16714584 CCCACGAAACGAGCAGGCGGGCGGACGGGCAGGCACCACACCGGCCAGAGAGACGGGATGCGCAA
66 CCGACGAAACGAGCAGGC--G-GG-CGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
*
16714649 GCCGTGGATCG-TTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
127 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
16714713 TTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGTCTTCACGTGAAGTTTCATGGCAAGAC
192 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** *
16714778 GACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTC-GAGATTTTTTAAAATTTTT
257 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTT
** ** *
16714842 TCAAAAGGAGTTTTGGCCCCAAACTTGGTAGACACGATCCTTGTATTTATGTTGGCATGCACAAA
321 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
16714907 AAAATTCAGCTAAAAACCCAAAGTGTATAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTT
386 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
16714971 CAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTCTTTAAGGGGATGTGA
451 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
16715036 GTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
516 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
16715101 TCATGTGCGCACACCCCCCCGACCCCCCTGATCGCCAGAACCCCAATGCCGTCGGTCAGGTTCTC
581 TCATGTGCGCACA------C--CCCCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * *
16715166 TGGCGATGCTCTGGCGATGGTGCCCCGGCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCA
637 CGGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* *
16715231 ACATGTGCTGCCGCAATCATCGGTCTGGTCTGATCTTAAACTGGGAATGAACTCCGTATGCTTAG
702 GCATGTGCTGCCGCAA-C--C---C---TC-G---GT---CT-GG---G---TCCGTATGCTTAG
* * * * * * * *
16715296 ACTGGGAAAGAACTCCATATGCCTATGTCAACCCATGGAGCGAGCGTGTGGGCGCTCAGTCGGCT
744 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCC
* * ** * * ** *
16715361 AGTGGGGCAGGATGCATAAGCCGAGGATCG-GCTGGGTCCCCCTCCACGTGCTGCCGATCT
809 AGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
16715421 TGCTGCTGTAACCCTCAGTCCGGTTCGATCTTAGATTGGAAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
16715486 CCGACGAAAC--G-A-GCGGGCGGGCGGGCACTACACCGGCCAGAGAGAC-GGATGCGCAAGCCG
66 CCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
16715546 TGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTGCATATTTCTACATGCCAATGCCATTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * **
16715611 TATGTG-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATAGCAAGATAAC
196 TATG-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * *
16715675 TCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCAG
260 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGG
* * * * *
16715740 AAGGTGTTTTGCCCCCAAACTTGGTAGAGGTGATCCTTGTATTTTTGTTGGCATGAACAAAAACA
325 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
16715805 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGA
390 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16715869 CGCTTTAATGGCTACTGGAAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
455 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
16715934 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
520 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
16715999 GTGCGCACA-CCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCTGACGATGCTCCG
585 GTGCGCACACCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCG
* * * * *
16716063 GCGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTACCG
650 GTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
16716128 TAACCCTCGGTCT-GGTCCG-AT-CTTAGACTGGGAATGAACTCCCTATGCCTAAGTCAACCCAC
715 CAACCCTCGGTCTGGGTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * ** * * * *
16716190 GAAATGAGCCTATGGACGCTCAGTCGGCCAGAGGGGCGAGATGTGCAAGTCGGGGATCGATCGGG
780 GAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGG
* *
16716255 TCCCCATCTGCGTGCTACCGATCC
845 TCCCCCTCTGCGTGCTGCCGATCC
* * * * *** **
16716279 TGCTACCGTAACCCTCAGTCGGGTTTGTTCTTAGACCAAGAATGAACTCTATATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * **
16716344 CCGACAAAATGAGCAGGCGGGCGGGCGGGTGGGTAGGCACTACGTCGGCCAGAGAGACGGGATGC
66 CCGACGAAACGAGCAGGCGGGCGGGC------G--GGCACTACACCGGCCAGAGAGACGGGATGC
* *
16716409 GTAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
123 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
*
16716474 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCC
188 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * *
16716539 AGATGACTCGTTTTCTATTTCTAACGATTTTTGAAACTTTTTACTGTTCAGGATTTTTTTAAATT
253 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATT
* * * * *
16716604 TTTTCGGATGGATTTTTTGCCCCAAACTTGGTAGACGTGATGCTTGTATTTTTTTTTGGCATGCA
318 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCA
* *
16716669 CAAAAAAATTCAGATAAAAACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
382 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
16716734 ATTTCAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTGAAATGCTCTTTAAAGGGGT
447 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * *
16716799 GTGAGTTTTCGAGGTTTGATGAGGGAGAGGGGGCCAATACAAGGGCCAAGTACCAGCACCCATTG
512 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
16716864 CACATCATGTGCGCACACCCCCGTCGGCCCCACCGATCGTCGTAACCCTAATACCGCCGGTCAGG
577 CACATCATGTGCGCACA-------C--CCCC-CCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
** * ** *
16716929 TT-T-------T--T-CGGTGATGGTTTCTCGACGAAGAAAAATATGGCACGAGCACATGCCCGA
632 TTCTCCGGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* *
16716983 GCCCGGCATGTGTTGCCGCAACCCTCAGTCCGGGCCGATCCTAGAATGGGAATGAACGTCGTATG
697 GCCCAGCATGTGCTGCCGCAA-CC-C--T-C--G--G-T-C-----TGGG--T---C--CGTATG
* * * *
16717048 CTTAGACGGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGCGTTCAGT
739 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * *
16717113 CGGCAAGAGGGGCGGGATGCGCAAGCCGAGGATCGA-CAGTGTCCCCCTCTACGTGCTGCCAATC
804 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATC
16717177 C
868 C
* ** ** * * * * *
16717178 TACTATCATAGCCCTTAATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTATGCCAA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
16717243 CCGACGAAATGAGCGGGCGGGCGGGCAGGGGGGCACTATATCGACCAAAAAGATGGGATGCGCAA
66 CCGACGAAACGAGCAGGCGGGCGGGC----GGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
*
16717308 GTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
127 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
16717373 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCCAGAT
192 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
16717438 GACTCGTTTTCTATTTCTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAATTTTTT
257 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTT
16717503 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
322 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
16717568 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTTGAAAAAAGTGTCCCCATTT
387 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA-TTTGAAAAAAGTGTCCCCATTT
*
16717633 CAGACACTTTAAAGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
451 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
16717698 GTTATCGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACA
516 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * ** * *
16717763 TCATGTGCGCCAACCCCGCGGCCCCACCAATCATCGAAACCCCAATGTCGCCGGTCAGGTTCTCC
581 TCATGTGCG-C-A---CAC--CCCC-CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
** * * * ** *
16717828 GATGATGCTCCGGGGATGGTGCCTCGACGAAGAAAAATACGGCATGAGCACATGCTCGAGCCCAG
638 GGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * * * *
16717893 CATGTGCTACTGTAACCCTTGGT-TCGGTCTG-AT-CTTAGGCTGGGAATGAACTCCGTATGCCT
703 CATGTGCTGCCGCAACCCTCGGTCTGGGTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * **
16717955 AAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAG-CATGCCAGA-GGGTAGGATGCGCAAGCCG
768 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTC-GGCCAGAGGGGCGGGATGCGCAAGCCG
* **
16718018 AGGATCGA-CTGGGTCCCCCTCTGCGTGCTGGTGATCC
832 GGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *** * * *
16718055 TGCTGTCGCATCCCTCAGTCTAGTACAACCTTAGACTGGGAACGAAC-CCTATATGCCTAAGCCA
1 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCC-GTATGCCTAAGCCA
* * * * * *
16718119 ACCGACGAAAC-A--A-GCGAGCGGGTGGACACTACATCGGCCAGAGGGACGGGATGCGCAAGCT
65 ACCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
16718180 GTGAATCGATA-GGTGGTAGGT-GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCTTTT
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
*
16718243 TTATGGCTTGTAAATTCATAGAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
195 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
16718308 TCGTGTTCTATTTCTCACGATTTTCGAAACTTTTTACGATTCAGGAT
260 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGAT
16718355 GAACTCCTTA
Statistics
Matches: 7111, Mismatches: 873, Indels: 503
0.84 0.10 0.06
Matches are distributed among these distances:
855 102 0.01
856 2 0.00
857 1 0.00
858 164 0.02
859 4 0.00
860 8 0.00
861 176 0.02
862 60 0.01
863 140 0.02
864 3 0.00
865 3 0.00
866 155 0.02
867 150 0.02
868 289 0.04
869 103 0.01
870 442 0.06
871 501 0.07
872 595 0.08
873 411 0.06
874 17 0.00
875 105 0.01
876 82 0.01
877 111 0.02
878 68 0.01
879 5 0.00
880 142 0.02
881 44 0.01
882 10 0.00
883 11 0.00
884 140 0.02
885 257 0.04
886 93 0.01
887 54 0.01
888 128 0.02
889 4 0.00
890 4 0.00
891 1 0.00
892 4 0.00
893 70 0.01
894 683 0.10
895 544 0.08
896 7 0.00
897 322 0.05
898 127 0.02
899 198 0.03
900 6 0.00
901 6 0.00
902 167 0.02
903 4 0.00
904 62 0.01
905 69 0.01
906 93 0.01
907 164 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (868 bp):
TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGG
TGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
AACCCTCGGTCTGGGTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
AAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT
CCCCCTCTGCGTGCTGCCGATCC
Found at i:16720100 original size:26 final size:26
Alignment explanation
Indices: 16720064--16720116 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16720054 CTAGTCTGAT
16720064 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16720090 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16720116 C
1 C
16720117 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Done.