Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 107 of 190
Found at i:16720186 original size:37 final size:37
Alignment explanation
Indices: 16720136--16720211 Score: 116
Period size: 37 Copynumber: 2.1 Consensus size: 37
16720126 CCCATGAAAC
*
16720136 GAGCATGCGGGCGCTCAACCGGCAAAAGGGGTAGGAT
1 GAGCATGCGGGCGCTCAACAGGCAAAAGGGGTAGGAT
* * *
16720173 GAGCATGTGGGCGCTCAATAGGCAACAGGGGTAGGAT
1 GAGCATGCGGGCGCTCAACAGGCAAAAGGGGTAGGAT
16720210 GA
1 GA
16720212 CCCCCACTGG
Statistics
Matches: 35, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
37 35 1.00
ACGTcount: A:0.28, C:0.18, G:0.41, T:0.13
Consensus pattern (37 bp):
GAGCATGCGGGCGCTCAACAGGCAAAAGGGGTAGGAT
Found at i:16720395 original size:26 final size:25
Alignment explanation
Indices: 16720366--16720415 Score: 91
Period size: 26 Copynumber: 2.0 Consensus size: 25
16720356 GGTCTGATCC
16720366 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCG-ATGCT
16720392 TAGACTGGGAATGAACTCCGATGC
1 TAGACTGGGAATGAACTCCGATGC
16720416 CTAAGACAAC
Statistics
Matches: 24, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 4 0.17
26 20 0.83
ACGTcount: A:0.28, C:0.20, G:0.28, T:0.24
Consensus pattern (25 bp):
TAGACTGGGAATGAACTCCGATGCT
Found at i:16720422 original size:26 final size:26
Alignment explanation
Indices: 16720367--16720422 Score: 87
Period size: 26 Copynumber: 2.2 Consensus size: 26
16720357 GTCTGATCCT
*
16720367 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTA
16720393 AGACTGGGAATGAACTCCG-ATGCCTA
1 AGACTGGGAATGAACTCCGTATG-CTA
16720419 AGAC
1 AGAC
16720423 AACCCATGAA
Statistics
Matches: 28, Mismatches: 1, Indels: 2
0.90 0.03 0.06
Matches are distributed among these distances:
25 3 0.11
26 25 0.89
ACGTcount: A:0.30, C:0.21, G:0.27, T:0.21
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTA
Found at i:16723922 original size:26 final size:26
Alignment explanation
Indices: 16723886--16723938 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16723876 TCAATCCAAT
16723886 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16723912 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16723938 C
1 C
16723939 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16724832 original size:26 final size:26
Alignment explanation
Indices: 16724781--16724833 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16724771 CTGGTCCGAT
*
16724781 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16724807 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16724833 C
1 C
16724834 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16725928 original size:8 final size:8
Alignment explanation
Indices: 16725915--16725945 Score: 53
Period size: 8 Copynumber: 3.9 Consensus size: 8
16725905 GATGAAACGA
16725915 GCGGGCAG
1 GCGGGCAG
16725923 GCGGGCAG
1 GCGGGCAG
*
16725931 GCGGGCGG
1 GCGGGCAG
16725939 GCGGGCA
1 GCGGGCA
16725946 CTACGTCGGC
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
8 21 1.00
ACGTcount: A:0.10, C:0.26, G:0.65, T:0.00
Consensus pattern (8 bp):
GCGGGCAG
Found at i:16727479 original size:26 final size:26
Alignment explanation
Indices: 16727450--16727502 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16727440 CCGGTCTGAT
* *
16727450 CTTAGACTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16727476 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16727502 C
1 C
16727503 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16727906 original size:26 final size:24
Alignment explanation
Indices: 16727877--16727929 Score: 61
Period size: 26 Copynumber: 2.1 Consensus size: 24
16727867 TTTTTCATGA
* *
16727877 TTTTGAAACTTTTTGCGGATCGAGAT
1 TTTTAAAAATTTTT-CGGATCGA-AT
*
16727903 TTTTAAAAATTTTTCGGATGGAAT
1 TTTTAAAAATTTTTCGGATCGAAT
16727927 TTT
1 TTT
16727930 GGCCCCAAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 2
0.83 0.10 0.07
Matches are distributed among these distances:
24 5 0.21
25 7 0.29
26 12 0.50
ACGTcount: A:0.26, C:0.08, G:0.19, T:0.47
Consensus pattern (24 bp):
TTTTAAAAATTTTTCGGATCGAAT
Found at i:16728337 original size:26 final size:26
Alignment explanation
Indices: 16728308--16728360 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16728298 CCGGTTTGAT
16728308 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16728334 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16728360 C
1 C
16728361 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16730449 original size:26 final size:26
Alignment explanation
Indices: 16730420--16730472 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16730410 TCGGTCCGAT
16730420 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16730446 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16730472 C
1 C
16730473 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16731312 original size:26 final size:26
Alignment explanation
Indices: 16731276--16731326 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16731266 CTGGTCCAAT
16731276 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16731302 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16731327 TTCTAAGTCA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16732192 original size:25 final size:26
Alignment explanation
Indices: 16732158--16732209 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
16732148 CCGGTCCGAA
16732158 CTTAAACTGGGAATGAA-TCAGTATG
1 CTTAAACTGGGAATGAACTCAGTATG
* *
16732183 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCAGTATG
16732209 C
1 C
16732210 CTAAGTCAAA
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 16 0.67
26 8 0.33
ACGTcount: A:0.31, C:0.17, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCAGTATG
Found at i:16733101 original size:26 final size:26
Alignment explanation
Indices: 16733065--16733117 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16733055 CCGGCCTGAT
16733065 CTTAGACTGGGAATGAAC-TCAGTATG
1 CTTAGACTGGGAATGAACTTC-GTATG
16733091 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16733117 C
1 C
16733118 CTAAGTGAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:16733618 original size:890 final size:893
Alignment explanation
Indices: 16729479--16739437 Score: 11938
Period size: 896 Copynumber: 11.2 Consensus size: 893
16729469 AGAGAGATCA
* * * *
16729479 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
* ** * * **
16729544 GCTTAGACAGGGAATGAACTTTGTATGCCTAAGTCAAGCCACGAAACGAGCGTGTGGGCATTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* ** * *** * **
16729609 TCGATCAGAGGGACGGGATGCGCAAGCC-GAGGATCAACCAGGTCCCCCTCTGCATGCTATCGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGAT
** *
16729673 CCTGCTACCGCAACCCTTGGTAC-GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCCAAGC
195 CCTGCTACCGCAACCCTTGGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
16729737 CAACCGATGAAATGAGCGGACGGGCGGGTGGGCCGACACTACGCCGTCCAGAGAGACGGGATGCG
259 CAACCGACG-AA--A-C-GA--AG-GGG-CGG--G-CACTACGCCGGCCAGAGAGACGGGATGCG
*
16729802 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATG
312 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
** * * *
16729867 ATATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCAG
377 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* **
16729932 GATGACTCGTTTTCTATTTTTCACAATTTTTG-AAACTTTTTGA-GGTTCGGGATTTTTTAAAAT
442 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAAACTTTTT-ACGGTTCGGGATTTTTTAAAAT
* * * *
16729995 TTTTT-GGAAAGGAGTTTTGGCCCTAAACTTGTTAGACATGATCCTTGTATTTTTGTTGGCAAGC
506 TTTTTCGG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * * *
16730059 AAAAAAAAATTCAGTTAAAAACTCAAAGTGTACAAGAATTTGTGACCATTTGAAAAAAGTGTCCC
570 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
16730124 CATTTCAGAGACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
635 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
16730189 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATT
700 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * *
16730254 GCACATCATGTGCGCACA-CCCCCCGG-CCCCCCAATCATCGGAACCCCAATGCCGTCGGTCAGG
765 GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGG
** * ** *
16730317 TTCTCCAACGATGCTCCGGCGATGGTGCCTTGACGAAGAAAAAT--GAGCACCAGCACATGCCCG
830 TTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACG-GCACCAACACATGCCCG
* ** * *
16730380 AGCCCAGCATGTGTTGCCATAACCCTCGGTTCGGTCC-GATCTTAGACTGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG-CCTGATCTTAGACTGGGAATGAACTCAGTA
* *
16730444 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCCCGAAACGAGCGTGCGGGTGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * * * * *
16730509 ACCAGCCAGATGGACGGGATGCACAAGCCGGGGATCAGTCGGGTCCCCCTTTG-GCTGCTACCAA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCG-TGCTGCCGA
* ** * ** *
16730573 TCCTGC-AGCCACAACCCTCAGTCCGGTCTGATCTTAGACTACGAATGAACTCCGTATACCTAAG
194 TCCTGCTA-CCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
*
16730637 ACAACCGACG--A--AA----C--G----A-----G-C-G-G-G-C-GG--GCG-AA--CG-GGA
258 CCAACCGACGAAACGAAGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
16730671 TCGATAGGGTGGTATGTGGGTTTTGGCACATCTTCATA-TTCTGGGCATGCC-ATCGCCATTTTT
323 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT--GCATGCCAAT-GCCATTTTT
* * * *
16730734 ATGGATTGTAAATTTCATACCCATGGTCCCTTAAGCCTTCATGTTGAAAGTTTCATGGCAAGAGG
385 ATGGCTTGTAAA-TTCATA-CAATGGTCCCTTAAGCCTTCACG-TG-AAGTTTCATGGCAAGACG
* *
16730799 ACTCGTTTTTCTATTTTTCATAATTTTTGAAAACTTTTGT--GGTTCGGTATTTTTT-AAATTGT
446 ACTCG-TTTTCTATTTTTCATGATTTTTGAAAACTTTT-TACGGTTCGGGATTTTTTAAAATT-T
* * * *
16730861 TTTTGAAAGGGAGTTTT-ACACCCAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCAATGC
508 TTTCGGAA-GGAGTTTTGGC-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC-ATGC
* *
16730925 A-AAAAAAATTCAG-TAAAAATTTGCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-CC
570 ACAAAAAAATTCAGCTAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
16730987 CCATTTCAAACACTTTACTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
634 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
16731052 GTGTGAGCTCTCGGGGTTTGATGAGGGATAGGGGGCCAATACAAGGGCCAAGTACCAGCACCCAT
699 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
16731117 TGCACATCATGTGCGCACACCCTCCTCGG-CCCCCCGATCATCGGAACCCCAATGCCGTCGGTTA
764 CGCACATCATGTGCGCACACCC-CCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCA
* * * * *
16731181 GGTTCTCCGGCGA---T--G--G-T--TTCCCAG-TGAAGAAAAATACGGCACCAGCACATGCCT
828 GGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCC
16731235 G
893 G
* * * *
16731236 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCC-AATCTTAGACTGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG-CCTGATCTTAGACTGGGAATGAACTCAGTA
** * * **
16731300 TGCTTAGACTGGGAATGAACTCCGTATTTCTAAGTCAACACACGACACGAGCGTGCAAGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * *
16731365 GCCGGCCAGAAGGGCAGGATGCGTAAGTCAGGGATC-GACTAGGTCCCCCGCTGCGTGCTGCCGA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTC-AGGTCCCCCTCTGCGTGCTGCCGA
* ** * * *
16731429 TCCTGCTGCCATAACCCTCAGG-CCGGTCTGATCTTAGACTGGGAATGAACTCCTTATGCCTAAG
194 TCCTGCTACCGCAACCCT-TGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
16731493 CCAACCGACGAAACGAGCGGGCTGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
258 CCAACCGACGAAACGA--AGG--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
** **
16731558 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TGTGTGCCAATGGGATTTT
319 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
16731622 TATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
384 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
** *
16731687 CGTTTTCTATTTTTCACAATTTTT-AAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT-GA
449 CGTTTTCTATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * * * *
16731750 AAGGATTTTTGGTCCC-AACTTGGTAAACGTGATCATTGTATTTTTTTTGGCATGCACAAAAAAA
514 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
16731814 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
579 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16731879 CACTTTAATGGCTATTGGCAGCAAACCTGTAAAATATCAAATGCTCTTTAAGTGGGTGTGAGTTC
644 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16731944 TCAAGGTTTGATAAGGGATAGGGGCCCAATATAAGAGGCCAAGTACCAGCACCCATCGCACATCA
709 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG-GGCCAAGTACCAGCACCCATCGCACATCA
* * * *
16732009 TGTGCGCATA-CCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCT----
773 TGTGCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * *
16732069 C--TG----G-CGATGGTGCCCCGAC-AAGGAAAAATACAGCACCGACACATTCTCG
838 CGATGCTCCGACGATGGTGCCCCGACGAA-GAAAAATACGGCACCAACACATGCCCG
* * * * *
16732118 AGACCAACTTGTGCTGCCGCAACCCTCGGTCCGGTCC-GAACTTAAACTGGGAATGAA-TCAGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG-CCTGATCTTAGACTGGGAATGAACTCAGTA
*
16732181 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAACGAGCGTGCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * ** * *
16732246 GCCGCCCAAAGGGGCGGG-T-CGATCAAGCCGGGGATCGGTCGGGTCCCCCTCTATGTCCTACCG
130 GCCGGCCAGAGGGGCGGGATGCG--CAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCG
* ** *
16732309 ATCCTACTACCATAACCCTTGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
193 ATCCTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
16732374 CCAACCGATGAAACGAGCGGACGGGCATGCGGGCGGGTGGGCTCTACGCCGGCCGGAGAGACGGG
258 CCAACCGACG-AA--A-C-GA-----A-G-GGGC----GGGCACTACGCCGGCCAGAGAGACGGG
* * * * * * *
16732439 ATGCACAAGTCGTGGATTGATAAGGTGGTAGGTGAGTTTAGGCACATCTTCAAATTTTTGCATGC
307 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
16732504 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
372 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
** * *
16732569 AACAAGACGACTCGTTTTCTATTTTTCACGATTTTTG-AAACTTTTTGCGGTTCGGGATTTTTTA
437 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTA
** * *
16732633 AAATTTTTTCGGAAGGAGTTTTGGCTGCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGAA
502 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
16732698 TGCACAAAACAATTCAGCTAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGCAAAAAGTGT
567 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * * *
16732763 CTCCATTTCAGACACTTTAATGTCTACTGGCAGCAAACCTGTAAAATATCAAATGTTCTTTAAGG
632 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
16732828 GGGTGTGAGTTCTCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
697 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * *
16732893 ATCGCACATCATGTGTGCACACCCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCGCCAGTC
762 ATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTC
* * *
16732958 AGGTTCCCCGGTGATGCTCCGACGATGGTGCCGCGACGAAGAAAAATACGGCACCAACACATGCC
827 AGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCC
16733023 CG
892 CG
*
16733025 AGCCCAGCATGTGGTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
* * *
16733090 GCTTAGACTGGGAATGAACTTCGTATGCCTAAGTGAACCCACGAAACGAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * ** * * * *
16733155 TCGACCAGAAGGGTGGGATGCACAAGTTAGGGATCAG-CAGGTCCCCCTTTGCGTGTTGCTGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGATC
* * * *
16733219 CTGCTACCGCAACCCTTGGTCTGATCTGATCATAGACTGGGAATGAATTTCGTATGCCTAAGCCA
196 CTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
16733284 ACCGACGAAACGAAGGGGCGGACACTACGCCAGCCA-AGAGACGGGAGGCGCAAGTCATGGATCG
261 ACCGACGAAACGAAGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
16733348 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
326 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* * *
16733413 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGATGGCTCGTTTTC
391 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * ** ***
16733478 TATATTTCATGA-TTTTGAAAACTTTTTGCGGTTCGAAATTTTTTAAAATTTTTTTATAAGGAGT
456 TATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * ** * *
16733542 TTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGTACACAAAAAAAAAATTCAAC
521 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAAATTCAGC
* * *
16733607 -CAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGGGTCCCCTTTTCAGACACTTT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
16733671 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
16733736 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCAC
715 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * * **
16733801 ACA-CCCCCCGG-CTCCCCGATCATCAGAACCCTAATGTCGTCTATCAGGTTCTCCGGCGATGCT
780 ACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT
* ** ** *
16733864 CTGGTGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCTG
845 CCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
* * * * *
16733913 AGCCCAGCATGTGCTGCCGTAACCCTCAGTCTAGTCC-GATCTTGGACTGGGAATGAACTCCA-T
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CGGCCTGATCTTAGACTGGGAATGAACT-CAGT
* * * *
16733976 ATGCTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCTGGTGCTC
64 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
** * * * * *
16734041 AGCCGGCCAGAGGGGCAAGATGCGCAAGAC-GGGATC-GACCGAGTCCCCTTCTACGTGCTGCCG
129 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAG-GTCCCCCTCTGCGTGCTGCCG
* * * *
16734104 ATCCTACTGCTGCAA-CCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTACGCCTAAG
193 ATCCTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
16734168 CCAACCGATGAAACGAGCGGACGGGCGGGCATTACGCCAGCCAGAGAGACGGGATGTGCAAGCCG
258 CCAACCGACGAAACGA----AGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * *
16734233 TAGATCGATAGGGTGCTAGGTGGGTTTAGGCACATCTTCATATTTCTGGATGCCAATGCAATTTT
319 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
16734298 TATGGCTTGTAAATTCATACAATGGTCGCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
384 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * ** * *
16734363 CGTTTTCTATTTTTCACGATTTTT-TAAACTTTTTACGGTACAAGATTTTTT-TAATTTTTTCGA
449 CGTTTTCTATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
16734426 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTATATTTTTGTT-GCATGCACAAAAAAA
514 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
16734490 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGA
579 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
16734555 CACTTTAATGGCTACTGCCAGCAAACCTATAAAATCTCAATTGCTTTTTAAGGGGGTGTGAGTTC
644 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16734620 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACCAGCTCCCATTGCACATCAT
709 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
16734685 GTGCGCACAGCCCCCCCGGCCCCCCCGATCACCGAAACCCCAACGCCGTCGGTTAGGTACTCCGA
774 GTGCGCACA-CCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * *
16734750 CGATGCTCCGACGATGGTACCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
838 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
* * ** * **
16734806 TGCCCAGGATGTGCTGCCGCAATGCTTGGTCCGGTCC-GATCTTAGACTTTGAATGAACTCCA-T
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG-CCTGATCTTAGACTGGGAATGAACT-CAGT
*
16734869 ATGC-TAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
64 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * **
16734933 ACCCAGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCATGCTATCGA
129 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGA
* ** * *
16734998 TCCTGCTGCCATAACCCTTGGT-TCGGTCTGATCTTAGACGGGGAATGAACTCCATATGCCTAAG
194 TCCTGCTACCGCAACCCTTGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * ** * *
16735062 CCAAACGACAAAACGAGATGGCGGGCGAGCACTACATCGACCAGA-AGGACAGGATGCGCAAGCC
258 CCAACCGACGAAACGA-A--G-GGGCGGGCACTACGCCGGCCAGAGA-GACGGGATGCGCAAGCC
16735126 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTC-TGCCAATGCCATT
318 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-CATGCCAATGCCATT
* * *
16735190 TTTAGGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCCAGACGA
382 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * ** * *
16735255 CTCGTTTTCTATTTTTCA-CAATTTTCAAAACGTTTTGTGGTTTGGGATTTTTTAAAATTTTTTT
447 CTCGTTTTCTATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* *
16735319 GGAAGGAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAA
512 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
16735384 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
577 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
16735449 AACACTTTAATGGCTACTGGCAACAAACTTGTAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGT
642 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
16735514 TCTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGGTACCAGCACCGCATCG-AC
707 TC-TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA-GTACCAGCACC-CATCGCAC
* * ** * * * *
16735578 ATCAATGTGCGCACACACACCCGG-CCCCCCGATCGTCGAAACCTCAATG-CGCTGGTCAGGTTT
769 ATC-ATGTGCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * * ** * *** *
16735641 TCCGACGATGC-CACGAAGATTGGTACTCTTCGATTTTTAGGAATTTTTTGCGGCACCAACAACA
833 TCCGGCGATGCTC-CGACGA-TGGTGC-C-CCGA---CGAAGAA--AAATACGGCACCAAC-ACA
16735705 TGCTCCAAGG
888 TGC-CC---G
* * * *
16735715 ATCTTCGCTACCATGTTGCTGCCGCAAACCTCGGT-CGGTCTGATCTTAGACTGGGAATGAACTC
1 AGC--C-C-AGCATG-TGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTC
* * *
16735779 A-TAT-C-TCGA-TAGGAATG-ACT-CGTATGCCT-AGTCAACCCATGAAACGAGCGT-CGGG-G
61 AGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* *
16735835 CTCAG-CGGCCAGAGGGGTGGGATGCGCAAG-C-GGGATCGG-CAGGTCCCCCTCTACGTGCTGC
126 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCTGC
* * * *
16735896 CGATCCTGCTACTGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTA
191 CGATCCTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
16735961 TGCCAACAGACGAAACG-AGTGGACGGGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGT
256 AGCCAACCGACGAAACGAAG-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
* *** *
16736025 GGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCGAATGCCATTTTT
320 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* * * **
16736090 ATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGACGTCTCATGGTGAGACGACTC
385 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* *
16736155 GTTTTATATTTTTCATAATTTTTG-AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
450 GTTTTCTATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * * *
16736219 AGGGGTATTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
515 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * * *
16736284 TCAGCTAAAAAATCAAAGTGTATAAGTTTTTTTTTTGTGACCATTTGAAAAAAATGTCCCCATTT
580 TCAGCTAAAAACTCGAAGTGTACAAG-----ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
16736349 CAAACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
640 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
16736414 GTTCTCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
705 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * ** * *
16736479 TCATGTGCGCACA-CCCCCCGGCCCCCTCGATCGCTGGAACCCCAATGCCGCCAATCAAGTTCTT
770 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * *
16736543 CGACGATGCTCCGATGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCTCG
835 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
* * * * ** *
16736602 AGCCCAGCATGTGCTGTCACAAACCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
* * * *
16736667 GCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAAGGAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
** * * * * *
16736732 CCGGCCAGAGGGGCGGGATGCAAAAGCCGGGGATTGATCGGGTCCCCCTCTGCGTGCTACCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGATC
* ** *
16736797 CTGCTACCGCAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCAAAGCCA
196 CTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** *
16736862 ACCGATAAAACG-AGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATC
261 ACCGACGAAACGAAG-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
*
16736926 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAAGCCATTTTTATGGC
325 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
16736991 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
390 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * **
16737056 CTCTTTTTCATGATTTTTG-AAACTTTTTGCGGTTAAGGATTTTTTAAAATTTTTTCGGAAGGAG
455 CTATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
*
16737120 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGC
520 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
16737185 TAAAAACTCGAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
16737250 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTGTTTAAGGGGGTGTGAGTTCTCGAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
16737315 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGT-C-C
715 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * * * *
16737378 ACACACCCCCCGGCCCCCCCTATCATCGAAACCCCAACGTCGCCGGTCAGTTTCTCTGACGATGC
780 ACAC-CCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGC
* * * *
16737443 TCCGATGATGTTGCCCTGACGAAGAAAAAT---G----------TG-GC-
844 TCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
* * * *****
16737478 A--CCGGCATGTGCTACCGCAACCATCGGTCTAATTTGATCTTAGACTGGGAATGAACTCAGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
* *
16737541 GCTTCGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
16737606 CCGGCTAGAGGGGCGGGATACGCAAGCCGGGGATCGGTCGGGTCCCCTTCTACGTGCTGCCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGATC
* * * * ** * * *
16737671 TTGCTACCGCAACCCTCGATCTAGTCCAATTTTAGACTAGGAATGAACTCCGTATGCCCAAGCCA
196 CTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
16737736 ACCGATGAAACG-AGCGGGCGGGCGAGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTG
261 ACCGACGAAACGAAG-GGGC--G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
16737800 GATCGATAAGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
321 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
*
16737865 TGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
386 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* **
16737930 TTTTCTATTTTTCATGATTTTT-AAAACTTTTTACGGTTCAGGA-TTTTTAAAATTTTTTTTGAA
451 TTTTCTATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA
** *
16737993 GGAGTTTTGGCTGCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATT
516 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
16738058 CAGCT-AAAATTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAAACA
581 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
16738122 CTTTAATGGCTACTGGCAGCAAACTTATAGAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTC
646 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
*
16738187 GAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
711 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
** * * * * *
16738252 GCG--CA-CCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCTGTCGGTCAAGTTCTCCGGTGA
776 GCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
* *
16738314 TGCTCCGATGATGGTGCCCCGATGAAGAAAAATACGGCACCAACACATGCCCG
841 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
* * * * ** * *
16738367 AGCCGAGCATGTACTGCCGCAACCCTCGCTCTGATCTGAGCTTAGACTGGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
* *
16738432 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGATCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
16738497 CCGGCCAGAGGGGCGGGATGCACAAG-CTGAGGATCGGCCAGGTCCCCCTCTG-GTGCTACCGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * ** * * *
16738560 TCTGCTGCCACAACCCTCGGTCCGGTCCAATCTTACACTAGGAATGAACTCCGTATGCCTAACCC
195 CCTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
16738625 AGCCGACGAAACGAGCGAACGGGCGGGCCGACGGGCACTACGCCGGCTAGAGAGACGGGATGCGC
260 AACCGACG-AA--A-CGAA-----GGG--G-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * *
16738690 AAGCCGTGGATCAATAGGGTGGTAGGTGGGTTT-GGCACATCTTCATATTTTTGCATTCCAATGC
313 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* * *
16738754 CATTTTTATGGCTTGCAAATTCATAGAATGGTCCCTTGAGCCTTCACGTGAAGTTTCATGGCAAG
378 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * * *
16738819 ACGACTCATTTTCTATTTTTCA-CAGTTTTCG-AAACTTTTTAAGGTTTGGGATTTTCTAAAATT
443 ACGACTCGTTTTCTATTTTTCATGA-TTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* * *
16738882 TTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACATTATCCTTGTATTTTTGTTGGCATGCAC
507 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* ** *
16738947 AAAAAAACTCAATTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTTGTCCCC
572 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG-TGTCCCC
* * *
16739011 ATTTCAGACACTTTAATGGTTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTCTAAGGGGGT
636 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
16739076 GTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCCTCG
701 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *
16739141 CACATCATGTGCGTACA-CCCCCTGGCCCCCCTGATCTCCGGAACCCCAATGCCGTCGATCAGGT
766 CACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGT
* * * *
16739205 TCTCCAGCGATGCTCCTACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACAGATGCTCG
831 TCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
* * * * ** *
16739268 AGCCCAGCATTTGCTGTCGTAACCCTCGGTCCAGCCTGATCTTAGACTGCAAATGAACTCTGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
* * * * *
16739333 GCTTAGACTGGGAATGAACTCCGAATGCCTAAGCCAACCGACGAAATGAGCGGGTGGGCGGGCAC
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC--GT--GCGGGCGC
* *
16739398 TACA-CCGGCCAGAGAGACGGGATGCGCAAGCC-GTGGATCG
127 T-CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGATCG
16739438 ATAGGGTGGT
Statistics
Matches: 7851, Mismatches: 952, Indels: 506
0.84 0.10 0.05
Matches are distributed among these distances:
855 12 0.00
856 240 0.03
857 7 0.00
858 43 0.01
859 27 0.00
860 6 0.00
861 24 0.00
862 5 0.00
863 26 0.00
864 196 0.02
865 102 0.01
866 55 0.01
867 1 0.00
868 2 0.00
869 1 0.00
870 1 0.00
874 320 0.04
875 1 0.00
876 182 0.02
877 89 0.01
878 205 0.03
879 4 0.00
880 10 0.00
881 260 0.03
882 250 0.03
883 83 0.01
884 45 0.01
885 32 0.00
886 8 0.00
887 102 0.01
888 256 0.03
889 71 0.01
890 713 0.09
891 543 0.07
892 288 0.04
893 277 0.04
894 392 0.05
895 117 0.01
896 795 0.10
897 490 0.06
898 178 0.02
899 234 0.03
900 44 0.01
901 539 0.07
902 117 0.01
903 4 0.00
904 35 0.00
905 47 0.01
906 14 0.00
907 188 0.02
908 101 0.01
909 6 0.00
910 8 0.00
911 5 0.00
912 7 0.00
913 27 0.00
914 16 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (893 bp):
AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGCCTGATCTTAGACTGGGAATGAACTCAGTAT
GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
CCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGATC
CTGCTACCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
ACCGACGAAACGAAGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
TATTTTTCATGATTTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
CACCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC
CGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
Found at i:16736678 original size:26 final size:26
Alignment explanation
Indices: 16736642--16736694 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16736632 CTGATCTGAT
16736642 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16736668 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16736694 C
1 C
16736695 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16738442 original size:26 final size:26
Alignment explanation
Indices: 16738406--16738459 Score: 108
Period size: 26 Copynumber: 2.1 Consensus size: 26
16738396 TCTGATCTGA
16738406 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
16738432 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
16738458 GC
1 GC
16738460 CTAAGTCAAC
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.26, C:0.20, G:0.28, T:0.26
Consensus pattern (26 bp):
GCTTAGACTGGGAATGAACTCCGTAT
Found at i:16739360 original size:26 final size:26
Alignment explanation
Indices: 16739308--16739360 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16739298 CCAGCCTGAT
* *
16739308 CTTAGACTGCAAATGAACTCTGTATG
1 CTTAGACTGCAAATGAACTCCGAATG
**
16739334 CTTAGACTGGGAATGAACTCCGAATG
1 CTTAGACTGCAAATGAACTCCGAATG
16739360 C
1 C
16739361 CTAAGCCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGCAAATGAACTCCGAATG
Found at i:16740070 original size:735 final size:731
Alignment explanation
Indices: 16738656--16740168 Score: 2162
Period size: 735 Copynumber: 2.1 Consensus size: 731
16738646 GGCGGGCCGA
* * *
16738656 CGGGCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGT
1 CGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16738721 TTGGCACATCTTCATATTTTTGCATTCCAATGCCATTTTTATGGCTTGCAAATTCATAGAATGGT
66 TTGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGGT
* *
16738786 CCCTTGAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACAGTTTTCGA
131 CCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACAGTTTTCGA
* ** * *
16738851 AACTTTTTAAGGTTTGGGATTTTCTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAG
196 AACTTTTTAAGGTTCGAAATTTTCTAAAATTTTTTCGGAAGGATTTTTGGCCCAAAACTTCGTAG
* *
16738916 ACATTATCCTTGTATTTTTGTTGGCATGCACAAAAAAACTCAATTAAAAAATCGAAGTGTACAAG
261 ACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAACTCAACTAAAAAATCGAAGTGTACAAG
* *
16738981 ATTTTGTGACCATTTGAAAAAGTTGTCCCCATTTCAGACACTTTAATGGTTACTAGCAGCAAACC
326 ATTTTGTGACCATTTGAAAAAGTTGTCCCCAGTTCAGACACTTTAATGGCTACTAGCAGCAAACC
*
16739046 TGTAAAATCTCAAATGCTCTCTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCC
391 TATAAAATCTCAAATGCTCTCTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCC
* * *
16739111 AATATAAGGGCCAAGTACCAGCACCCCTCGCACATCATGTGCGTACACCCCCTGGCCCCCCTGAT
456 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGAT
* * *
16739176 CTCCGGAACCCCAATGCCGTCGATCAGGTTCTCCAGCGATGCTCCTACGATGGTGCCCCGACGAA
521 CTCCAGAACCCCAATGCCATCGATCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACGAA
* * * * *
16739241 GAAAAATACGGCACCAACAGATGCTCGAGCCCAGCATTTGCTGTCGTAACCCTCGGTCCAGCCTG
586 GAAAAATACGGCACCAACACATGCCCGAGCCCAACATATGCTGCCGTAACCCTCGGTCCAGCCTG
* * *
16739306 ATCTTAGACTGCAAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGAATGCCTAAGCCAAC
651 ATCTTAGACTGCAAATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGAATGCCTAAGCAAAC
* *
16739371 CGACGAAATGAGCGGGTGGG
716 CCACGAAACGAGC----GGG
16739391 CGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
1 CGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
** *
16739456 TTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
66 TT-GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGG
* * ** *
16739521 TCCCCTAAGCCTTCACGTGAAGTTTCGTGGCAAGAGGACTTGTTTTCTATTTTTCAC-GATTTTT
130 TCCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACAG-TTTTC
* * *
16739585 GAAACTTTTTATGGTTCGAAATTTTTTAAAATTTTTTTGGAAGG-TGTTTTGGCCCAAAACTTCG
194 GAAACTTTTTAAGGTTCGAAATTTTCTAAAATTTTTTCGGAAGGAT-TTTTGGCCCAAAACTTCG
* * *
16739649 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA-TCAGCTAAAAACTCGAAGTGTAC
258 TAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAACTCAACTAAAAAATCGAAGTGTAC
* ** *
16739713 AAGATTTTGTTATTATTTGAAAAAAG-TGTCCCCAGTTCAGACACTTTAATGGCTACTGGCAGCA
323 AAGATTTTGTGACCATTTG-AAAAAGTTGTCCCCAGTTCAGACACTTTAATGGCTACTAGCAGCA
* * * *
16739777 GACCTATAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
387 AACCTATAAAATCTCAAATGCTCTCTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGA
* *
16739842 GGCCAATATAGGGGCCAAGTACCAGCACCCATCGCACATCTTGTGCGCACACCGCCC-GGCCCCC
452 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCTGGCCCCC
* **
16739906 CCGATCGT-CAGAACCCCAATGCCATCGGTCAGGTTCTCC-GACGATGCTCCGGTGATGGTGCCC
516 CCGATC-TCCAGAACCCCAATGCCATCGATCAGGTTCTCCAG-CGATGCTCCGACGATGGTGCCC
* * * *
16739969 CGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAACATATGCTGCCGTAACCCTTGGTC
579 CGACGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAACATATGCTGCCGTAACCCTCGGTC
* ** * *
16740034 CGGTCC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATAAACTCTGTATGCCT
644 CAG-CCTGATCTTAGACTGCAAATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGAATGCCT
*
16740098 AAGTAAACCCACGAAACGAGCGGG
708 AAGCAAACCCACGAAACGAGCGGG
** * * *
16740122 CGGGTGCT-CAGCCGGCCTGAGGGACGGGATGCGCAAGCCGGGGATCG
1 CGGGCACTACA-CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
16740169 GCCGGGTCCC
Statistics
Matches: 693, Mismatches: 76, Indels: 22
0.88 0.10 0.03
Matches are distributed among these distances:
730 2 0.00
731 42 0.06
734 1 0.00
735 432 0.62
736 216 0.31
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (731 bp):
CGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
TTGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGGT
CCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACAGTTTTCGA
AACTTTTTAAGGTTCGAAATTTTCTAAAATTTTTTCGGAAGGATTTTTGGCCCAAAACTTCGTAG
ACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAACTCAACTAAAAAATCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAGTTGTCCCCAGTTCAGACACTTTAATGGCTACTAGCAGCAAACC
TATAAAATCTCAAATGCTCTCTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGAT
CTCCAGAACCCCAATGCCATCGATCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACGAA
GAAAAATACGGCACCAACACATGCCCGAGCCCAACATATGCTGCCGTAACCCTCGGTCCAGCCTG
ATCTTAGACTGCAAATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGAATGCCTAAGCAAAC
CCACGAAACGAGCGGG
Found at i:16740072 original size:26 final size:26
Alignment explanation
Indices: 16740043--16740095 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16740033 CCGGTCCGAT
*
16740043 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
16740069 CTTAGACTGGGAATAAACTCTGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16740095 C
1 C
16740096 CTAAGTAAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:16740276 original size:101 final size:102
Alignment explanation
Indices: 16740096--16740291 Score: 250
Period size: 101 Copynumber: 1.9 Consensus size: 102
16740086 CTCTGTATGC
* * *
16740096 CTAAGTAAACCCACGAAACGAGCGGGCGGGTGCTCAGCCGGCCTGAGGGACGGGATGCGCAAGCC
1 CTAAGTAAACCCACGAAACGAGCGGGCAGGCGCTCAGCCGGCCAGAGGGACGGGATGCGCAAGCC
* *
16740161 GGGGATCGGCCGGGTCCCCCTCTGTGTGCTACAATGG
66 GAGGATCGGCCGGGTCCCCCTCTGCGTGCTACAATGG
* * * ** * *
16740198 CTAAGTCAACCCACG-AATGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGTAAGCT
1 CTAAGTAAACCCACGAAACGAGCGGGCAGGCGCTCAGCCGGCCAGAGGGACGGGATGCGCAAGCC
* * *
16740262 GAGGATTGGTCGGGTCCCCTTCTGCGTGCT
66 GAGGATCGGCCGGGTCCCCCTCTGCGTGCT
16740292 GCCGATCCTA
Statistics
Matches: 79, Mismatches: 15, Indels: 1
0.83 0.16 0.01
Matches are distributed among these distances:
101 65 0.82
102 14 0.18
ACGTcount: A:0.19, C:0.28, G:0.37, T:0.16
Consensus pattern (102 bp):
CTAAGTAAACCCACGAAACGAGCGGGCAGGCGCTCAGCCGGCCAGAGGGACGGGATGCGCAAGCC
GAGGATCGGCCGGGTCCCCCTCTGCGTGCTACAATGG
Found at i:16741192 original size:26 final size:26
Alignment explanation
Indices: 16741162--16741214 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16741152 GTTGACTTAG
* *
16741162 GCATACAGAGTTCATTCCCAGTGTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
*
16741188 GCATACGGAGTTCATTCCAAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
16741214 G
1 G
16741215 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCAAGTCTAA
Found at i:16742388 original size:26 final size:26
Alignment explanation
Indices: 16742358--16742410 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16742348 GTTGACTTAG
*
16742358 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16742384 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16742410 G
1 G
16742411 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16744734 original size:717 final size:721
Alignment explanation
Indices: 16743230--16744741 Score: 2239
Period size: 717 Copynumber: 2.1 Consensus size: 721
16743220 AGCGCAAACA
* *
16743230 CGCTCG-TTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGA-CG
1 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCG
* * * ** *
16743293 AGGGTTGCCGATAGCACATGCTGGGCTCGTGAAATGTGTTGGTGCTGCATTCTTTCTTCGGCCAG
66 AGGGTT-ACGACAGCACATGCTGGGCTCGTGAAATGTGCTGGTGCCACATTCTTTCTTCGACCAG
* * * *
16743358 GGCACCATCGTCGGAGCCATCGATCGGTGAACCTGATAGACGACATTAGGGTTCTGATGATCGGG
130 GGCACCATCGTCGGAGCCATCGATCGGAGAACCTGACAGACGACATTAGGGTTCCGACGATCGGG
*
16743423 GAGCCGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
195 GAGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* *
16743488 TATCCCTCATCAAACCTCAAGAACTCACACCCCCTTACAGAGCATTTGAGATTTTACAGGTTTGC
260 TATCCCTCATCAAACCTCAAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* * * * *
16743553 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
325 TACCAGTAGCCATTAAAGTGTCTAAAATAGGGAAACTTTTTTCAAATGGCCACAAAATCTTGTAC
* * *
16743618 ACTTCGAGTTTTTAGTTGAATTGTTTTGTGCATGCCAACAAAAATACAACGATCAGGTCTACCAA
390 ACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAAAACGATCACGTCTACCAA
16743683 GTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAA
455 GTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAA
* *
16743748 TCATGAAAAAGAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
520 TCATGAAAAAGAAAAAACGAGTCGCCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
* * ** *
16743813 TGTGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAATCCAC
585 TATAAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCAC
* * * * *
16743878 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTAGCTGACGTAGTGCCCGCCCGCC
650 CTACCACCCTATCAATCCACGACTTGCACATCCCGTCTCTCTAGCAGACGTAGTGCCCGCCCACC
*
16743943 CGTCTGC
715 CGCCTGC
* * * *
16743950 CTGCTCATTTCGTCGGTTGGCTTTGGCATACAGAGTTCATTCCCAGTCTAAGATCAGATCGGACC
1 C-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACC
* * *
16744015 GAGGGTTACGACAGCACATGCTGGGCTCAG-G-CATGTGCTGGTGCCACATT-TTTCTTC-ATCG
65 GAGGGTTACGACAGCACATGCTGGGCTC-GTGAAATGTGCTGGTGCCACATTCTTTCTTCGACCA
* * *
16744076 GGGCACCATCGAT-GGAG-CATC-A-CTGGAGAACTTGACCAG-CGGCATTGGGGTTCCGACGAT
129 GGGCACCATCG-TCGGAGCCATCGATC-GGAGAACCTGA-CAGACGACATTAGGGTTCCGACGAT
*
16744136 CGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATGA-T
191 C-GGGGAGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT-ATT
*
16744200 GGCCCCCTATCCCTCATCAAACCTCAAGAAATCACA-CCCCTTAAAGAGTATTTGAGATTTTACA
253 GGCCCCCTATCCCTCATCAAACCTCAAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACA
16744264 GGTTTGCTACCAGTAGCCATTAAAGTGTCTAAAATAGGGAAAC-TTTTTCAAATGGCCACAAAAT
318 GGTTTGCTACCAGTAGCCATTAAAGTGTCTAAAATAGGGAAACTTTTTTCAAATGGCCACAAAAT
* *
16744328 CTTGTGCACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAAAATGATCACGT
383 CTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAAAACGATCACGT
**
16744393 CTACC-AGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTT
448 CTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTT
* * * *
16744457 TCCAAAATCGTGAAAAAATAAAAAACGAGTCGCCTTGTCATGAAACTTCACGTGAAGGCTTAAGG
513 TCAAAAATCATG-AAAAAGAAAAAACGAGTCGCCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
16744522 GACCATTGTATAAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCT
577 GACCATTGTATAAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCT
*
16744587 AAACCCACCTACCACCCTATCAATCCACGACTTGCACATCCCGTCTCTCTGGCCAG-CGTAGTGC
642 AAACCCACCTACCACCCTATCAATCCACGACTTGCACATCCCGTCTCTCTAG-CAGACGTAGTGC
16744651 CCGCCCACCCGCCCT-C
706 CCGCCCACCCG-CCTGC
* ** *
16744667 TCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCACTCCCAGTCTAAGATTGGACCAGACC
1 -CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACC
16744732 GAGGGTTACG
65 GAGGGTTACG
16744742 GCAACACACT
Statistics
Matches: 713, Mismatches: 65, Indels: 31
0.88 0.08 0.04
Matches are distributed among these distances:
716 68 0.10
717 353 0.50
718 83 0.12
719 101 0.14
720 10 0.01
721 19 0.03
722 70 0.10
723 9 0.01
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (721 bp):
CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCG
AGGGTTACGACAGCACATGCTGGGCTCGTGAAATGTGCTGGTGCCACATTCTTTCTTCGACCAGG
GCACCATCGTCGGAGCCATCGATCGGAGAACCTGACAGACGACATTAGGGTTCCGACGATCGGGG
AGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
ATCCCTCATCAAACCTCAAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
ACCAGTAGCCATTAAAGTGTCTAAAATAGGGAAACTTTTTTCAAATGGCCACAAAATCTTGTACA
CTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAAAACGATCACGTCTACCAAG
TTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAAT
CATGAAAAAGAAAAAACGAGTCGCCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
ATAAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACC
TACCACCCTATCAATCCACGACTTGCACATCCCGTCTCTCTAGCAGACGTAGTGCCCGCCCACCC
GCCTGC
Found at i:16745783 original size:26 final size:26
Alignment explanation
Indices: 16745747--16745799 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16745737 GTTGACATAG
*
16745747 GCATAGGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16745773 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16745799 G
1 G
16745800 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16746667 original size:26 final size:26
Alignment explanation
Indices: 16746627--16746679 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16746617 GTTAACTTAG
16746627 GCATACGAAGATCATTCCCAGTCTAA
1 GCATACGAAGATCATTCCCAGTCTAA
* * *
16746653 GCATACGGAGTTCATTCGCAGTCTAA
1 GCATACGAAGATCATTCCCAGTCTAA
16746679 G
1 G
16746680 ATCAGACCAA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGAAGATCATTCCCAGTCTAA
Found at i:16747086 original size:890 final size:889
Alignment explanation
Indices: 16743975--16748206 Score: 5554
Period size: 890 Copynumber: 4.7 Consensus size: 889
16743965 GTTGGCTTTG
* * *
16743975 GCATACAGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* * * *
16744040 CTCAGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGATGGAGCATCACTGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG-CGGA-CATCACTGGAGA
* *
16744105 ACTTGACCAGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
129 ACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTG
*
16744170 CGATGGGTGCTGGTACTTGGCCCTTATGA-TGGCCCCCTATCCCTCATCAAACCTCAAGAAATCA
193 CGATGGGTGCTGGTACTTGGCCCTTAT-ATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCA
* * *
16744234 CA-CCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTAAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * * *
16744298 TAGGGAAAC-TTTTTCAAATGGCCACAAAATCTTGTGCACTTCGAGTTTTTAGCTGAATTGTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
16744362 GTGCATGCCAACAAAAATAAAATGATCACGTCTACC-AGTTTGGGGCCAAAACTCCTTCTGAAAA
387 GTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
16744426 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCCAAAATCGTGAAAAAATAAAAAACGAGTCGCC
452 AATTTTAAAAAATC-CGAACCGTAAAAAGTTTCGAAAATCATG-AAAAATAGAAAACGAGTCGTC
* *
16744491 TTGTCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATAAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
16744556 CATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGACTTG
580 CATTGGCACACAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGACTTG
*
16744621 CACATCCCGTCTCTCTGGCC-AGCGTAGTGCCCGCCCACCCGCCCTCTCGCTCGTTTCGTCGGTT
645 CGCATCCCGTCTCTCTGGCCGA-CGTAGT---CG--C-CCCG-CC-C-CGCTCGTTTCGTCGGTT
* * ** *
16744685 GGCTTAGGCATACGGAGTTCACTCCCAGTCTAAGATTGGACCAGACCGAGGG--T--TA-C-GG-
700 GGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTTCATAGCAGGA
** * *
16744743 -CAACA-CAC-T-GAGGGGGA-CCGATCGATCCCCGGCTTGCGTATCCCGCCCCTCTGGCC-GGT
765 TCGGCAGCACGTAGAGGGGGACCCGATCGATCCCC-GCTTGCGCATCCCGCCCCTCTGGCCTGCT
** * * * * *
16744802 CGAGTGCCCGCACACTCGTTTCATGGGTTGACCTAGGCATAGGGAGTTCATTCCCAGTCTAA
829 -GAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTAA
* * * *
16744864 GGATACAGAGTTCATTCCCAATCTAAGATCAGACTGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* *
16744929 CTCGGGCATGTGCTGGTGCCGCATTCTTCTTCGTCGGGGCACCATCGCCGGAGCATC-GTCGGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG-CGGA-CATCACT-GGAG
* * ** * * * * * *
16744993 AACTTGATCGGCGGCATTGGGGTTCCGGTGAGCGGGGGGGCTGGGGGGTGTGTGTACATGATGTA
128 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* * ** *
16745058 CGCTGGGTGCTGGTACTCGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAAGTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
* * * *
16745123 ACCCCCTTAAAAAGCATTTGAGATTCTACACGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAGT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
16745188 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTTGCTCATTTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
16745253 TGCATGCCAAAAAAAATACAAGGATCACAG-CTACCAAGTTTGGGACCAAAACTCCTTTCGAAAA
388 TGCATGCCAAAAAAAATACAAGGATCA-TGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
16745317 AATTTTAAAAAATCTCGAACCGCAAAAACTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCT
452 AATTTTAAAAAATC-CGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * * * **
16745382 TGCCATGAAACTTCACGTCAAGGCTTTAGGGACCGTTATATGAATTTACAAGATATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*** * *
16745447 ATTGGCATGTAGAAATATGAAGATGTGCCTAAAACCCACCTACCACCCTATCGATCCACGACTTA
581 ATTGGCACACAGAAATATGAAGATATGCCT-AAACCCACCTACCACCCTATCGATCCACGACTTG
* * * *
16745512 CGCATCCCGTCTCTGTGGTCGACGTAGTGCCTGCCCGCTTGCCCGCCCGCCCGCTCGTTTTGTCA
645 CGCATCCCGTCTCTCTGGCCGACGTA--G--T---CGC---CCCG--C-CCCGCTCGTTTCGTCG
* * * *
16745577 GTTGGCTTATGCATACAGAGTTCATTCCCAGTCGAAGATCAGACTAAACCGAGGGTTGCAGTAGC
697 GTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTTCA-TAGC
* * * * * * *
16745642 AGGATTGGCAGCACATAGAGGGGGACCCGGCTTGATCCTCGGCTTGCGCATCCTGCCCCTCTAGC
761 AGGATCGGCAGCACGTAGAGGGGGACCC-GATCGATCC-CCGCTTGCGCATCCCGCCCCTCTGGC
* * * * * *
16745707 CGGCTGAGCGCCCGCACGCCCGTTTCGTGGGTTGACATAGGCATAGGGAGTTCATTCCCAGTCTA
824 CTGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTA
16745772 A
889 A
* ** *
16745773 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGTGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* ** ** *
16745838 CTCGGGCATGTGCTAGTATCGCATTTTTCTTCACCGAGGCACCAT--C-G----C-C-GGAGAAC
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCGGACATCACTGGAGAAC
* * * **
16745894 CTGACCAGCGGCATTAGGGTTCCGACGATCGGGGGGGCCGAGGGGGTGTGCGCACATGATGTTTG
131 CTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTGCG
*
16745959 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAAAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
* ***
16746024 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAACCGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
16746089 GGACACTTTTTTCAAATGGTCACAAAATCTTATACACTTCGAGTTTCTAGCTGAATTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* *
16746154 CATGCCAAAAAAAATACAAGGATCATGTTTACCAATTTTGGGGCCAAAACTCCTTCCGAAAAAAT
390 CATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * * * *
16746219 TTTAAAAAATGCCGAACCATAAAAAGTTTGGAAAATCATGAAAAATAGAAAATGAGTTGTCCTGC
455 TTTAAAAAAT-CCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
* *
16746284 CATGAAACTTCACGTGAAGGGTTAAGGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
** * *
16746349 GGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCA
584 GGCACACAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCA
*
16746414 TCCCGTCTATCTGGCCGACGTAGT-G-CCCG-CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACA
649 TCCCGTCTCTCTGGCCGACGTAGTCGCCCCGCCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACA
* ** * *
16746476 GAGTTCATTCCCAATCTAAGATCAGACCAAACTAAGGGTTCTCATAGCAGGATCGGTAGCACGCA
714 GAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTT-TCATAGCAGGATCGGCAGCACGTA
* *
16746541 AAGGGGGACCCGATCGATCCCCGCTTGCGCATCCCGCCCCTCTGGCCTGCTGAGCACCAGCACGC
778 GAGGGGGACCCGATCGATCCCCGCTTGCGCATCCCGCCCCTCTGGCCTGCTGAGCACCCGCACGC
* *
16746606 TCGTTTCGTGGGTTAACTTAGGCATACGAAGATCATTCCCAGTCTAA
843 TCGTTTCGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTAA
* ** *
16746653 GCATACGGAGTTCATTCGCAGTCTAAGATCAGACCAAACCGAGGGTTACGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
*
16746718 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCAACATCGCGGACCATCACTGGAGAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCGGA-CATCACTGGAGAA
* *
16746783 CCTGACCGGCGGCATTGGGGTTCCGACGATCGGTGGGGTCGGGGTGGGTGTACGCACATGATGTG
130 CCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGGCCGGGG-GGGTGTGCGCACATGATGTG
*
16746848 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
*
16746913 ACCCCCTTAAA-AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
16746977 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGTGTTTTTAGCTGAATTCTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
16747042 TGCATGCCAACAAAAATACAAGGATCATGTCTAACAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
388 TGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * *
16747107 ATTTTAAAAAATCCCAAACCGTAAAAAGATTT-GAAAATCGTGAAAAATTGAAAACGAGTCTTCT
453 ATTTTAAAAAAT-CCGAACCGTAAAAAG-TTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCT
*
16747171 TGCCATGAAACTTCACGTGAAGGCTCAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * * * * * *
16747236 ATTGGCACACAAAAATATGTAGATTTCCCCAAACACACCTACCACCCTATCGATCCATGGCTTGC
581 ATTGGCACACAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGC
* * * *
16747301 GCATCCTGTCTCTCTGGTCGACGTAGTGCCCATCCGCCTGCCCACCCGCTCATTTCGTCGGTTGG
646 GCATCCCGTCTCTCTGGCCGACGTAGT---C-GCC-CC-G--C-CCCGCTCGTTTCGTCGGTTGG
* * ** * * *
16747366 CTGAGGCATACAGAGTTCATTCCTAGTCTAAGATCAGACCGGACTGAGGGTTCCCATAACAGGAT
702 CTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTT-TCATAGCAGGAT
* * *
16747431 TGACAGCACGTAGAGGGGGACCCGATCGATCCCCGCTTGCGCATCCCGCCCCTCTGGCCTTCTGA
766 CGGCAGCACGTAGAGGGGGACCCGATCGATCCCCGCTTGCGCATCCCGCCCCTCTGGCCTGCTGA
*
16747496 GCACCCGCACGCTCGTTTCGTGGGTTGACTTAGACATACGGAGATCATTCCCAGTCTAA
831 GCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTAA
* * * * *
16747555 GCATATGGAGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* * *
16747620 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTTGTC---GAAGCAT--C-G---TCA---GAGAAC
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCGGACATCACTGGAGAAC
*
16747673 CTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGTGCACACATGATGTGCGA
131 CTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGA
* *
16747738 TGGGTGCTGGTAGTTGGCCTTTATATTAGG-CCCCTATCCCTCATCAAACCTCAAGAACTCACAC
196 TGGGTGCTGGTACTTGGCCCTTATATT-GGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
*
16747802 CCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
16747867 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTA
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * **
16747932 CATGCCAAAAAAAATACAAGGATCTTGTGTACCAAGTTTGGGGAGAAAACTCCTTCCGAAAAAAT
390 CATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* *
16747997 TTTAAAAAATCCTGAACCTTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
455 TTTAAAAAATCC-GAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
* *
16748062 CATGAAACTTCATGTGAAGGCTTAACGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* *
16748127 GGCACATAG-AATATGAAGATATACCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCA
584 GGCACACAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCA
*
16748191 TCCCGCCTCTCTGGCC
649 TCCCGTCTCTCTGGCC
16748207 AGAGAGACGG
Statistics
Matches: 2941, Mismatches: 337, Indels: 132
0.86 0.10 0.04
Matches are distributed among these distances:
880 175 0.06
881 7 0.00
882 93 0.03
883 3 0.00
886 4 0.00
887 154 0.05
888 394 0.13
889 246 0.08
890 590 0.20
891 211 0.07
892 4 0.00
893 2 0.00
894 1 0.00
895 69 0.02
896 6 0.00
897 4 0.00
898 86 0.03
899 403 0.14
900 4 0.00
901 1 0.00
902 283 0.10
904 2 0.00
905 4 0.00
906 2 0.00
907 8 0.00
908 2 0.00
909 180 0.06
910 3 0.00
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.25
Consensus pattern (889 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCGGACATCACTGGAGAAC
CTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATT
TTAAAAAATCCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CACACAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATC
CCGTCTCTCTGGCCGACGTAGTCGCCCCGCCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAGA
GTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTTCATAGCAGGATCGGCAGCACGTAGAG
GGGGACCCGATCGATCCCCGCTTGCGCATCCCGCCCCTCTGGCCTGCTGAGCACCCGCACGCTCG
TTTCGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTAA
Found at i:16747569 original size:26 final size:26
Alignment explanation
Indices: 16747530--16747581 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16747520 TTGACTTAGA
16747530 CATACGGAGATCATTCCCAGTCTAAG
1 CATACGGAGATCATTCCCAGTCTAAG
* * *
16747556 CATATGGAGTTCATTCCTAGTCTAAG
1 CATACGGAGATCATTCCCAGTCTAAG
16747582 ATCGGACCGG
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.23, G:0.19, T:0.29
Consensus pattern (26 bp):
CATACGGAGATCATTCCCAGTCTAAG
Found at i:16750666 original size:26 final size:26
Alignment explanation
Indices: 16750637--16750692 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
16750627 CTGATCCGAT
*
16750637 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16750663 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16750689 CTTA
1 CTTA
16750693 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16751568 original size:26 final size:26
Alignment explanation
Indices: 16751539--16751591 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16751529 CTGGTCCGAT
*
16751539 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
16751565 CTTAGATTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16751591 C
1 C
16751592 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16754216 original size:26 final size:26
Alignment explanation
Indices: 16754172--16754224 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16754162 CTGGTCCAAT
*
16754172 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATCAACTCCGTATG
* *
16754198 CTTAGACTGGGAATCAACTCCTTATG
1 CTTAGACTGGAAATCAACTCCGTATG
16754224 C
1 C
16754225 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATCAACTCCGTATG
Found at i:16755109 original size:26 final size:26
Alignment explanation
Indices: 16755073--16755123 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16755063 GATCTGATCC
16755073 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
16755099 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16755124 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:16755832 original size:903 final size:900
Alignment explanation
Indices: 16751712--16763930 Score: 12604
Period size: 903 Copynumber: 13.7 Consensus size: 900
16751702 ACAACCCTTG
* * * * * * *
16751712 GTATGCTTAAGCCAACCGATGAAACGAGCAGGTG-GGCAGGCGGGCGGGTGGGCACTACACCGAC
1 GTATGCCTAAGCCAACCGACGAAACGAGC-GG-GCGG-A--C-GGCAGGCGGGCACTACGCTGGC
* * * * * *
16751776 CAAAGAGACAGGATGCGTAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTTAT
60 CAGAGAGACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCAT
** *
16751841 ATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CTTCAC
124 ATTTCTGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* ** *
16751905 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC
189 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTC
* * * * * * *
16751970 AAGATTTTTTAAAA-TTTCTTCGGCAGGAGTTTTGACCCCAAACTTGGTAGATGTAATCCTTGTA
254 AGGATTTTTTAAAATTTTTTTC-GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* * *
16752034 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAACCTCGAAGTGTATAAGATTTTGTGACCATT
318 TTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* *
16752099 TTAAGAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT-AAATCTCAAA
383 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
*
16752163 TGCCCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
448 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * *
16752228 GTACCAGCACCCATCGCACATCATGTACGCACACCCTCCTGACCCCCCCGAT---------CCCA
513 GTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCCGATCACCGGAACCCCA
* * * * *
16752284 ATGCCGCCGGTCAGGTTCT-C--CGA--------CGATGGTACCCCGATGAAGAAAAATACGGCC
577 ATGCCGCTGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCA
* * * * * * ** *
16752338 CCAACACATGCCCGAGCCCAACATGTGCTGCCGCTACCCTCGGTCCGGTTTGATCTTAGATTGGG
642 CCAGCACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCCGATCTTAGACTGGG
* * * *
16752403 AATGAACTTCGTATGCTTGGACTGGGAATGAACT-CGTATGCCTAAGTCGACCCACAAAACGAGC
707 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
** * * * * * *
16752467 GCGCGGGTGCTCAGCCGGCCAGAAGGGCGGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCGTCT
772 GTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCT
* ** * ** ** * * * *
16752532 GCATGCTGCCAATCCTACTATCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTC
837 GCGTGCT-CTGATCCTGCTGCCGTAACCCTCAGTCCAGTCTAATCTTAGACTGGGAATGAACTCC
* * *
16752597 GTATGCCTAAGCCAACTGACGAAACGAGCGGGCAGG-CGGGCCGGCGGGCACTACG-TCGACCAG
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GGAC-GGCAGGCGGGCACTACGCT-GGCCAG
* * * *
16752660 ACAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATT
63 AGAGACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * * *
16752725 TCT-AAGTGCCAATGCCATTTTTATGGCTTGTAAATCCATACAATGCTCCCTTAAGCCTTCGCGT
127 TCTGCA-TGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* ** * *
16752789 GAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAGCTTTTTGCGGTTCGG
191 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAG
* * * * * * *
16752854 GATTTTTTAAATTTTTTTTGGAAGGATTTTTGGCCCTAAACTTGGTAGATGTGATCCTTATATTT
256 GATTTTTTAAAATTTTTTTCGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
16752919 TTTTTGGCATGCACAAAACAATTTAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
321 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
16752984 AAAAAGTGACCCCATTTCAGACACTTTAATGGCTACTGGCAACAAAACTGTAAAATCTCAAATGC
386 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
16753049 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
451 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* ** * ** *
16753114 CCAGCACCCATCACACATCATACGCGCACACCCCCCTCGGCCCCCCTGATTGCCGGAACCCCAAC
516 CCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCACCGGAACCCCAAT
* * * * * * ** *
16753179 ACCACCGATCAGGTTCT-CTGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCAC
579 GCCGCTGGTCAGGTTCTCCAG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCAC
*
16753243 CAGCTCATGCCCGAGCCCAGCATGTGCT-ACCGCAA--CTC--TC--G---G-TC-----C--GG
643 CAGCACATGCCCGAGCCCAGCATGTGCTGA-CGCAACCCTCGATCTGGTCCGATCTTAGACTGGG
*
16753290 --T---CT--G-AT-CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGC
707 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * *
16753346 GTACGGGCGTTCAACCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGACCGAG-CCCCCTCT
772 GTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCT
* * * * * * * ** *
16753410 ACGTGCTGTCGATCCTACTACCGCATCCCTCAGTCCAATCCGATCTTAGACTGGAAATGAACTCC
837 GCGTGCTCT-GATCCTGCTGCCGTAACCCTCAGTCCAGTCTAATCTTAGACTGGGAATGAACTCC
* * * ** *
16753475 GTATGCCTAAGCCAACAGACGAAACGAGCGGGCGGGAGGGCGGGCGGGCTTTACGCCGGCCAGAG
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GGACGGCAGGCGGGCACTACGCTGGCCAGAG
* *
16753540 AGACGGGATGCGCAAGCTGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
65 AGACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
** *
16753605 TGTGTGCCAATGCCATATTT-GTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
129 TGCATGCCAATGCCAT-TTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * * ** *
16753669 AGTTTCATGGCAAGAAGACTCATTTTTTATTTTTCACAATTTTTGAAACTTTTTACGGTTCAGGA
193 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGA
* * *
16753734 TTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTCACCCTTGTATTTT
258 TTTTTTAAAATTTTTTTC-GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
16753798 TGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
322 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * *
16753863 AAACGTATCCCCATTTCAGACACTTTAATGGCTACTGGCGGCAAACTTGTAAAATCTCAAATGCT
387 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
16753928 CTTTAAGGCGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
452 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * *
16753993 CAGCACCCATCGCACATCATGTGAGCACACCCCCCGGCCCCCTCGATCGCTGGAACCCCAATGCC
517 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCC
* * * * *
16754058 G-TCGGTTAGGTTCT-CAGGTGATGCTCCAGCGATTGTGCCCCGACGAAGAAAAATGTGGCACCA
582 GCT-GGTCAGGTTCTCCA-GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* *
16754121 GCACATGCCCGAGCCCAGCATGTGCT-ACTGCAACCCTCGATCTGGTCCAATCTTAGACTGGAAA
645 GCACATGCCCGAGCCCAGCATGTGCTGAC-GCAACCCTCGATCTGGTCCGATCTTAGACTGGGAA
* * *
16754185 TGAACTCCGTATGCTTAGACTGGGAATCAACTCCTTATGCCTAAGTCAACCCATGAAACGAGCGT
709 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* ** *
16754250 ACGGGCGCTCAACCGGCCAGTGGGGTAGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTCTGC
774 ACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGC
* * * * ** * **
16754315 ATGCTGTCGATCTTGCTGCCGTAACCCT-TGATCTGGTCTAAACTTAGACTGGGAATGAACTTT
839 GTGCTCT-GATCCTGCTGCCGTAACCCTCAG-TCCAGTCTAATCTTAGACTGGGAATGAACTCC
* * * * *
16754378 GTATGCCTAAGCCATCCAATGAAACGAGCGGGCGGGCGG-A--CGGGCACTACGCCGGCCAGAGA
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCTGGCCAGAGA
* * *
16754440 GACGGGATGCGTAAGCCGTGGATAGATATGGTGGTATGTGGGTTTAGGCACATCTTGATATTTCT
66 GACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
16754505 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTCCACATGAAG
130 GCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
16754570 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGATT
195 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGATT
* * * * *
16754635 TTTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGCAGACATAATCCTTGTATATTTT
260 TTTTAAAATTTTTTTC-GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTT
**
16754699 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCCTAGTGTACAAGATTTTGTGACCATTTGAAAA
324 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * * * *
16754764 AAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAGCCTGTAAAATTTCAATTACTCT
389 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* * * * *
16754829 TTAAAGGGGTGTGAGTTCTCGAGGCTCGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACTA
454 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
*
16754894 GCACCCATCGCACATCATGTGTGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGC
519 GCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGC
* * * * * *
16754959 TGGTCAGGTTCTCCAGCGATCCTCCGGCAATAGTGCCCTGACGAAAAAAAATACGGCACCAGCAC
584 TGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * * * * * *
16755024 ATGCTCGAGCCTAGCATGTTCTGTCACAACCCTCCATCTGATCTGATCCTAGACTGGGAATGAAC
649 ATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAAC
16755089 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
714 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
* * * * * *
16755154 CCCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATTGGTCGGGTCCCCTTGTGCGTGCT
779 CGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCT
*
16755219 ACTGATCCTGCTGCCGTAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCC
844 -CTGATCCTGCTGCCGTAACCCTCAGTCCAGTCTAATCTTAGACTGGGAATGAACTCC
* * * * *
16755277 GTATACCTAAGCCAATCGACAAAACGAGCGGGCAGACGAGCAGGCGGGCAATACGCTGGCC-GAG
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACG-GCAGGCGGGCACTACGCTGGCCAGAG
*
16755341 AGACGGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
65 AGACGGGATGCGCAAGCCGTGGATAGATAGG-TGGTAGGTGGGTTTAGGCACATCTTCATATTTC
*
16755406 TGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAA
129 TGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
*
16755471 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACCATTTTCAAAACTTTTTGCGGTTCAGGAT
194 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGA-
* * * * *
16755536 TTTTTTGAAATTTTTTTGGAAAGAGTTTTGGTCCCAAGCTTGGTAGACATGATCCTTGTATTTTT
258 TTTTTTAAAATTTTTTTCGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * * * * *
16755601 TTTGGGATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGATCGTATGAAA
323 TTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* * *
16755666 AAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAGTAAACCAGTAAAATCTCAAATGCTC
388 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
*
16755731 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGCGGGATAGGGGGCCAATATAAGGGCCAAGTACC
453 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
** * *
16755796 AGCACCCATCGCACGCCATGTGCGCACACCCCCCGGCCCCCCCGATCATCGGAACCCCAATGCCA
518 AGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCG
* * * * * * *
16755861 CCGATCAGGTTCT-CTGACGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGTGACACCAAC
583 CTGGTCAGGTTCTCCAG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
* * *
16755925 ACAAGCCCGAGCCCAGCATGTG-TGACTGCAACCCTCGGTTTGGTCCGATCTTAGACTGGGAATG
647 ACATGCCCGAGCCCAGCATGTGCTGAC-GCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATG
** * *
16755989 AACTTTGTACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-TGC
711 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC
* * * * ** *
16756053 GGGTGCTCAGCCGGCCAGAGGGGCGGGATGCACAGGCCGGGGATCGATCGGGTCCCCCTCTACGT
776 GGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * ** * * **
16756118 GCTTCCGATCCTACT-ATGTCAACCATCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCC
841 GC-TCTGATCCTGCTGCCGT-AACCCTCAGTCCAGTCTAATCTTAGACTGGGAATGAACTCC
* * * * * *
16756179 GTATGCGTAACCCAACCAACGAAATGAGCGGGCGGACGGGCTGGCGGGTACTACG-TCGGCCAGA
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGAC-GGCAGGCGGGCACTACGCT-GGCCAGA
* * *
16756243 GAGATGGGATGCGCAAGCCGTGGATCGATATGGTGGTAGGTGGGTTTAGGCACATCATCATATTT
64 GAGACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
16756308 CTGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
128 CTGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * * * * *
16756373 AGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTCAAAAATTTTTGGGGTT-TGAT
193 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAG-G
* *
16756437 ATTTTTTTTAAA-TTTTTTCGAAAGGAGTATTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
257 A-TTTTTTAAAATTTTTTTCGAAA-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * * *
16756501 TTTGTTGGCGTGCACAAAAAAATTCAGCTAAAAACTCGATGTGTACAAAATTTTGTGACCATTTG
320 TTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
16756566 AAAAAAGTG-CCCCATTTCAAACACTTTAATTGCTACTAGCAGCAAACCTGTAAAATCTCAAATG
385 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
16756630 CTCTTTAAGGGGGTGTGAG-T-TC------T--TGAGGGATAGGGGGCCAATATAAGGGCCAAGT
450 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
**
16756685 ACCAGCACCCATCG--CAT-A------C-CA-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
515 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATG
* **
16756739 CCG-TCGGTCAGGTTCTCCAGCGATGCTCTGGCGATGGTGCCCCGACGAAGAAAGGTGCGGCACC
580 CCGCT-GGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACC
** * * *
16756803 AGCACATGCCCGAGCCCAGCATGTGCTGTTGCAACCCTTGGTCTGGTCCAATCTTAGACTGGGAA
644 AGCACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAA
* * * * *
16756868 TGAACTTCGTATGCTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGTGT
709 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
** * * * *
16756933 GGGGGCGCTCAGCCGGCCAGACGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGG
774 ACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTC---
*
16756998 ATGCTACTGATCCTGCTGCTGCAACCCTCTGTGTGCTGTTGATCTTGCTACCATAACCCTCAGTC
836 -TG---C-G----TGCT-CTG--A---TC------C---TG--C-TG---CCGTAACCCTCAGTC
* *
16757063 CCGTCCAATCTTAGACTGGGAATGAACTCC
871 CAGTCTAATCTTAGACTGGGAATGAACTCC
* * *
16757093 GTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCGGGAGGGCGGGCACTACG-TCGGCCAGA
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCA-GGCGGGCACTACGCT-GGCCAGA
* * *
16757157 GAGATGGGATGCGCAAGCCATGGATAGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTT
64 GAGACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * * **
16757222 CTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA-AACTGGTCGTTTAAGCCTTCACGTG
128 CTGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAA-TGGTCCCTTAAGCCTTCACGTG
* * * ** *
16757286 AAGTTTCATGGCAAGACGACCCGTTTTTTATTTTTCATAATTTTTGAAACTTTTTGCGGTT-TGA
192 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAG-
* * * *
16757350 AATTTTTTAAAA-TTTTTTCAAAAGGTGTTTTGG-CCCAAACTTGGTAGATGTGATCCTTGTATT
256 GATTTTTTAAAATTTTTTTCGAAA-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * *
16757413 TTTTTTGGCATGCACAACAAAATTCAGCTAGAAACTGGAAGTGTACAAGATTTTGTGACCATTTG
320 TTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
16757478 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATG
385 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
16757543 CTCTTTAAGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
450 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
16757608 ACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG-CCCCTCGATCGTCCGGAACCTCCAA
515 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC-ACCGGAACC-CCAA
* * *
16757672 TGTCGCCGGTCAGGTTCT-C--CG--G-T-----GATGGTGCCCCGACGAAGAAAAATACGGCAC
578 TGCCGCTGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* *
16757726 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-AGTCTGGTCCGATCTTAGATTGGG
643 CAGCACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGA-TCTGGTCCGATCTTAGACTGGG
* * *
16757790 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACAAAATGAGC
707 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * **** * * **
16757855 GTGCGGGCGCTCAACCGG--GGATCGGCCAGG-T-C-C---CCCTTTA-CGTG-C-TG-CCGCAA
772 GTACGGGCGCTCAACCGGCCAGA-GGGGCGGGATGCGCAAGCCGGGGATCG-GCCGGGTCCCCCT
* * * * **** ** * * * * *
16757908 CTGTCG-G-TCGGGTCC-GAT--CTTAGACTGGGAGTGAACTC-CAT-AT-GCCT---AATCCAA
835 CTG-CGTGCTCTGATCCTGCTGCCGTA-ACCCTCAGTCCAGTCTAATCTTAGACTGGGAAT-GAA
16757962 --CC
897 CTCC
* * * * * * * * * * * * * * **
16757964 G-ATG---AAACGAGCGGGCG-GACGGGCGGGCGGGC-ACTACGTCGGCCA-GAGAGACGGGATA
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGC-A-GGCGGGCACTA-CG-CTGGCCA
* * * * * *
16758022 CGCA-AGCCGTGGAT-CG-ATAG-GGTGG-TAGGT--G-GGT--TTAGG----C--ACATCTTCA
62 -G-AGAGACG-GGATGCGCA-AGCCGTGGATAGATAGGTGGTAGGTGGGTTTAGGCACATCTTCA
*** * *
16758071 TATTTCTATGTGCCAATGCCATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
123 TATTTCTGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * * ** * *
16758136 TGTAAAGTTTCATGGCAAGATGACTCGTTTTCCATTTTTCATGATTTTTAAAACTTTTTACGGTT
188 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTT
* * *
16758201 CAGGATTTTTT-AAATTTTTTTGGAAGGAGTTTTGGCCGCAAACTTGGTAGACGTGATCCTTGTA
253 CAGGATTTTTTAAAATTTTTTTCGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
*
16758265 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
318 TTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* *
16758330 TGAAAAAAGTGTCCCTATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
383 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
** * *
16758395 TGCTCTTTAAGGGGGTGCAAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGGCAA
448 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * **
16758460 GTACTAGCACCCATCGCACATCATGTGCGCACA-CCCCCGG-ACCCCCGATCGTCGGAACCCCAA
513 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAA
* * * * **
16758523 TGCCGCTGGTCAGGTTCTCCGGTGGTGCTCCGACGATGGTG-CCCGGTGAAGAAAAATGCGGCAC
578 TGCCGCTGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* *
16758587 CAGCACATGCCC-ATGCCCAGCATGTGCTGCCGTAA--C-C-AT-T-G---G-TC-----C----
643 CAGCACATGCCCGA-GCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCCGATCTTAGACTGGG
* * *
16758632 ---G-A-TCCG-AT-CTTAGACTGGGATTGAACTCCATATGCCTAAGTCAACCCACGAAATGAGC
707 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * ** ** * *
16758690 GTGCGGGCGCTCAGCCGACCAGAGGGGCGGGAAACGCAAATCGGGGATCGGCCAGGTCCTCCTCT
772 GTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCT
* * * * ** ** * * *
16758755 GCGTGCTGCCGTTCCTTCTACCACAACCCTCAGT-TTGATCCAATCTTCGATTGGGAATGAACTC
837 GCGTGCT-CTGATCCTGCTGCCGTAACCCTCAGTCCAG-TCTAATCTTAGACTGGGAATGAACTC
16758819 C
900 C
* * * *
16758820 GTATGCCTAAGCTAACCGACGAAACGAGTGAGC-G--GGCGGGCGGGCACTACG-TCGGCCAGAG
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCT-GGCCAGAG
* *
16758881 AGACGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGGTGGGTTTATGCACATCTTCATATTTC
65 AGACGGGATGCGCAAGCCGTGGATAGATAGG-TGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * *
16758946 TGCGTGCCAATGCCGATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTCACGTGA
129 TGCATGCCAATGCC-ATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
** ** * *
16759011 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGAGGTTTAGGA
193 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGA
* * * * *
16759076 TTTTTTTTAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTT
258 -TTTTTTAAAATTTTTTTCGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * *
16759141 TGTTGGCCTGCAAAAAAAAATTCACCTAAAAACTCGGAGTGTACAAGATTTTGTGACCATTTGAA
322 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * * *
16759206 AAAAATGTCCCCATTTTAAACACATTAATGGCTACT-GCTAGCAAACCAGTAAAATCTCAAATGC
387 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGC
* * * * *
16759270 TGTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGCCCAAAATAAGGGCCAAGCA
451 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
16759335 CCAGCACCCATCGCACATCTTGTGCGCACACCACCCCGGCCCCCCCGATCGCCGAAACCCCAATG
516 CCAGCACCCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCCCGATCACCGGAACCCCAATG
* * * * **
16759400 TCACCGGTCAGGTTCTCCGGCGATGCTTCAGCGATGCTCCAGCGATGGTGCCCCGGTGAAGAAAA
580 CCGCTGGTCAGG-T-T----C--T-C--CAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAA
* *
16759465 ATGCGGCACCAGCACATGCCCGAGCCCAGTATGTGCTGCCGCAA-CC-C--TC--G---G----T
634 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCCGATCTT
16759517 ---CT-GG--T----T-CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
699 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* ** * * * * * **
16759569 AAACGAGCGTGCATGCGGTCAGCCGGCCAGAGGGGCGGGATGGGCACA-TCGGGGATCGACCAAG
764 AAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCA-AGCCGGGGATCGGCCGGG
* ** ** ** ** *
16759633 TCCCACTCTGCGTGCTGCCAATCCTGCTGCCACAACCCTTGGTCTGGTCTGATCTTAGACTGGGA
828 TCCCCCTCTGCGTGCT-CTGATCCTGCTGCCGTAACCCTCAGTCCAGTCTAATCTTAGACTGGGA
*
16759698 ATGAACTTC
892 ATGAACTCC
* ** * * * *
16759707 GTATGCCTAAGCCAACCGACGGAACGAGTAGG-TG--GGCGGGCGAGCACTACGCTGGCCAAAGA
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCTGGCCAGAGA
* *
16759769 CACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
66 GACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
16759834 --ATGCGCCAATGCCATTTTTATGGCTTGTAAAGTCATACAATGGTCCCCTAAGCCTTCACGTGA
130 GCAT--GCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * * * * **
16759897 AGTTTCGTGGCAAGACGACTCCTTTTCTATTTTTCACGATTCTCAAAACTTTTTACGGTTTTGGA
193 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGA
* *
16759962 TTTTTTAAAA-TTTTTTCAGAATGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTT
258 TTTTTTAAAATTTTTTTC-GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * * *
16760026 TGTTGGTATGCATAACAAAACTCAGCT-AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAA
322 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
16760090 AAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
387 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
16760155 CTTTAAGGGGATGTGAGTTCTCGAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
452 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * *
16760220 CAGCACCCAACGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCACCGGAACCCTAATGTC
517 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCC
* * * * * * *
16760285 GCCGGTAAGGTTCTTC-GACGATGCT-CGGACGATGGTGCCCCGACAAAGAAAAGTGCAGAACCA
582 GCTGGTCAGGTTCTCCAG-CGATGCTCCGG-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * *
16760348 GCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCTAGTTTGATCGTAGACTGGGAAT
645 GCACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCT-G---G-TC-----C---G-AT
* *
16760413 GAACTCCGTATGCTACACTGGGAATGAACTCCGTATGC-TACACTGGGAATGAACTCCATATGCC
696 ---CT---TA-G----ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
** * *
16760477 TAAGTCAACAAACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCACAAGCCG
750 TAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCG
** * * * * * * * ** * *
16760542 GGGATCGATCGGGTCCCTCTCTGCGTACTGTCGATCCTACTACTGCAACCCTTGGTCCGGTCCAA
815 GGGATCGGCCGGGTCCCCCTCTGCGTGCTCT-GATCCTGCTGCCGTAACCCTCAGTCCAGTCTAA
16760607 TCTTAGACTGGGAATGAACTCC
879 TCTTAGACTGGGAATGAACTCC
* * *
16760629 GTATGCCTAAACCAACCGACGAAACGAGC--G-GG-C-G--GGCGGGCACTATGCCGGCC----A
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCTGGCCAGAGA
*
16760683 GA---GA---G--A--C-------G---GGTGGTAGGTGGGTTTAGGCACAACTTCATATTTCTG
66 GACGGGATGCGCAAGCCGTGGATAGATAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
16760728 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
131 CATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* ** ** * * *
16760793 TT-ATGGCAAGACGACTGGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTTCAAGATTT
196 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGA-TT
* *
16760857 TTTTAAAA-TTTTTTCAAAAGGAGTTTTGGCCCC-AACTTGGTAGACGTGATCCTTGTATTTTTA
260 TTTTAAAATTTTTTTCGAAA-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTT
* * * *
16760920 TTGGCAGGCATAAAAAAATTCAGCTAAAAACTCGAATTGTACAAGATTTTGTAACCATTTGAAAA
324 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * *
16760985 AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAACCTATAAAATCTCAAATGCTCT
389 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
16761050 TTAAGGGGATGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTA
454 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* *
16761115 GCACCCATCACACATCATGTGCGCACACCCCCTCGGCCCCCCCGAAT-ACC-GAA-CCCAGTGCC
519 GCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCG-ATCACCGGAACCCCAATGCC
* * * * * ** *
16761177 GCCGGTTAGGTTCT-CTGACGATGCTCCGGTGATGGTGCCCTGGTGAAGAAAAATGCGGCACCAA
582 GCTGGTCAGGTTCTCCAG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
* * * * * *
16761241 CACATGCTCGAGCCCAGCATGTGCTGTCACAACCCTCGATCCGATCTGATCTTAGACTGGGAATG
646 CACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATG
* * * * *
16761306 AACTTCATATGCTTAGACTGGGAACGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGTGTAC
711 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC
* * * * * * *
16761371 GGGTGCTCAACCGGCCAGAGGGGTGGGATGTGCAAGCTGAGGATCGGCCGGGTCCCCGTCTGTGT
776 GGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGT
* * ** * * *
16761436 GCTACCGATCCTGCTGGCCGCAACCCTC-GTTCTTGATCTGATCTAAGACTTTGGAATGAACTCC
841 GCT-CTGATCCTGCT-GCCGTAACCCTCAG-TCCAG-TCTAATCTTAGAC-TGGGAATGAACT-C
16761500 C
900 C
*
16761501 AGTA-GCCTAAG-C-ACCGACGAAACGAGC-GGCGG-CGGCGGGCGGGCAC-ACG-TCGGCCAGA
1 -GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCT-GGCCAGA
* * ** *
16761559 GAGAACGGGATGCTCAAGCCGCGGAGGCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATAT
64 GAG-ACGGGATGCGCAAGCCGTGGA-TAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATA-
* ** * * * *
16761624 TTTATGTGTGCCACAAAGCCATTTTTATGGCATGTAAA-TCATACAATGGTCTCTT-AG-CTTCA
125 TTTCTGCATG-C-CAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
** * *
16761686 CGTGAA-TTTCCATGGCAAGACGCACTGCGTTTT-TA-TTTTCATGATTTTTAAAA-ATTTTGAC
188 CGTGAAGTTT-CATGGCAAGACG-ACT-CGTTTTCTATTTTTCACAATTTTCAAAACTTTTTG-C
* *
16761747 GGTTC-GGATTTTTTAAAA-TTTTTTCGGAGGAGTTTTGGCCCCAAA-TTGGTAGACTGTGATCC
249 GGTTCAGGATTTTTTAAAATTTTTTTCGAAAGAGTTTTGGCCCCAAACTTGGTAGAC-GTGATCC
*
16761809 TTGTATTTTTGTT-GCATGTGGCACAAAAAAAATTCAGCCT-AAAACTCGTAAGTGTACAAGATT
313 TTGTATTTTTTTTGGCA--T-GCAC-AAAAAAATTCAG-CTAAAAACTCG-AAGTGTACAAGATT
* ***
16761872 TT-TGACCATTTG-AAAAAGTGTCCCCATTTCAACACACTTTAATGGCGGTTGGCAAGCGAAAAC
372 TTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGGC-AGC--AAAC
* * *
16761935 CTGTAAAATCTC-AATGCTCTTAAAGGGGGTGTGAGTTCTTGAGGTTTGATGA-TGATA-GGGGC
433 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * * *
16761997 CAATATAAGGGCTAAGTACCAGTA-CTATCGCACATCATGTGTGCACACCCCCTGG--CCCCCGA
498 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGA
* * * * * *
16762059 TCGCCGGAACCCCAATGTCACCGATAAGGTTCT-C--CGA--------CGATGGTGCCCCGACGA
563 TCACCGGAACCCCAATGCCGCTGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGA
* * * * * * ** *
16762113 AGAAAAATACGACACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCAGTTC
628 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCC
* *
16762178 GATCTTAGACTGGGAATGAACTCCAG-ATGCATAGACTTGGAATGAACTCCGTATGCCTAAGTCA
693 GATCTTAGACTGGGAATGAACTCC-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * * * *
16762242 ACCTATGAAACGAGAGTGCGGGTGTTCAGCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCG
757 ACCCACGAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
* * * ** * ** *
16762307 GCCCGGTCCCCCTCTGCGTGTTGTCGATCCTGCTGCCACAACCCTCGGTCTGGTCTGATCTTAGA
822 GCCGGGTCCCCCTCTGCGTGCTCT-GATCCTGCTGCCGTAACCCTCAGTCCAGTCTAATCTTAGA
*
16762372 CTTGGAATGAACTCC
886 CTGGGAATGAACTCC
* * * *
16762387 GTATGCCTAAGCCAATCGACGAAACGAGCAGGC-G--GGC-GGC---CACTACGCCGACCAGAGA
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCTGGCCAGAGA
** * ** *
16762445 GACGGGATGCGCAAGCCGCAGATCGATAGGGTGGTAAATGGGTTTGGGCACATCTTCATATTTCT
66 GACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
16762510 GCATGCCAAAGCCATTTTTATGGCATGTAAATTCATACAATGGTCCCTTAAGCCTTCA-GTGAAA
130 GCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG-AA
* * * *
16762574 GTTTCATGGCAA-AAGACTCGTTTTCTA-TTTTCACGATTTTTAAAACTTTTTACGGTTC-GAGA
194 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAG-GA
* *
16762636 TTCTTTAAAA-TTTTTTCGAAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
258 TTTTTTAAAATTTTTTTCGAAA-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
16762700 TGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGGA
322 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-GA
16762765 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
386 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
16762830 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG-CAATATAAGGGTCAAGTA
451 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* **
16762894 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCTGAT-GTCGGAACCCCAATG
516 CCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCACCGGAACCCCAATG
* * * * **
16762958 CCGCCGATCAGGTTCT-C--C--TGATCC-GCGATGGTG-CCCG-TGAAGAAAAATATGGCACCA
580 CCGCTGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * * *
16763015 ACACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTC-AGTCTGATCCAATCTTAGACTGGGAA
645 GCACATGCCCGAGCCCAGCATGTGCTGACGCAACCCTCGA-TCTGGTCCGATCTTAGACTGGGAA
** * *
16763079 TGAACTCCGTATGCTTAGACTGGGAATGAACTCTATATGCCTAAGTAAACCCATGAAACGAGCGT
709 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * ** ** * *
16763144 ACGGGTGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGAGGATCGATCGGGTCCCTGTATGT
774 ACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGC
** * ** *
16763209 GTGCTACCAATCCTGCTGCTGTAACCCTC-GATCTGGTCTAAACTTAGACTGGGAATGAACTCC
839 GTGCT-CTGATCCTGCTGCCGTAACCCTCAG-TCCAGTCTAATCTTAGACTGGGAATGAACTCC
* * * *
16763272 GTATGCCTAAGCCAACCGACGAAACGAGCGGGC-G--GGCGGGCAGGCACTACGCCGGCCAAAGA
1 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCTGGCCAGAGA
* ** * *
16763334 GACAGGATGCGCAAGCAATGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCT
66 GACGGGATGCGCAAGCCGTGGATAGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
16763399 GCATGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAGGCCTTCACGTGAAG
130 GCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * ** * **
16763464 TTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCCGTTTGGGATT
195 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGATT
* * *
16763529 TTTTAAAA-TTTTTTCGGAAGGAGTTTTGTCCCCAAACTTGGTAGACGTGTTCCTTGTATTTTTT
260 TTTTAAAATTTTTTTC-GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTT
16763593 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
324 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * * * *
16763658 AAGTGTCCCTATTTCGGACACTTTAATGGCTACTAGTAGCAAACCTATAAAATCTCAAATGCTCT
389 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
16763723 TTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATGAGGGCCAAGTACCA
454 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* *
16763788 GCACCCATCGAACTTCATGTGCGCACACCCCCCGG-CCCCCCGATCGA-CGGAACCCCAATGCCG
519 GCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC-ACCGGAACCCCAATGCCG
* * * * *
16763851 CCGGTCAGGTTCTCC-GACGATGCTCCGACAATGGTGCCCCGACGAAGAAAAATACGGCACCAAC
583 CTGGTCAGGTTCTCCAG-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
16763915 ACATGCCCGAGCCCAG
647 ACATGCCCGAGCCCAG
16763931 TCTGATCTAT
Statistics
Matches: 9674, Mismatches: 1196, Indels: 915
0.82 0.10 0.08
Matches are distributed among these distances:
835 64 0.01
836 7 0.00
837 6 0.00
838 2 0.00
839 2 0.00
842 3 0.00
843 3 0.00
844 3 0.00
845 7 0.00
846 1 0.00
847 5 0.00
848 1 0.00
849 7 0.00
850 4 0.00
851 23 0.00
852 11 0.00
853 26 0.00
854 385 0.04
855 16 0.00
856 13 0.00
857 15 0.00
858 3 0.00
859 3 0.00
860 13 0.00
861 62 0.01
862 10 0.00
863 4 0.00
865 1 0.00
866 24 0.00
867 35 0.00
868 117 0.01
869 44 0.00
870 133 0.01
871 28 0.00
872 337 0.03
873 9 0.00
874 12 0.00
875 47 0.00
876 108 0.01
877 35 0.00
878 627 0.06
879 166 0.02
880 102 0.01
881 386 0.04
882 403 0.04
883 195 0.02
884 216 0.02
885 373 0.04
886 143 0.01
887 361 0.04
888 37 0.00
889 171 0.02
890 364 0.04
891 197 0.02
892 237 0.02
893 346 0.04
894 22 0.00
895 13 0.00
896 11 0.00
897 6 0.00
898 47 0.00
899 819 0.08
900 59 0.01
901 77 0.01
902 614 0.06
903 925 0.10
904 117 0.01
905 39 0.00
906 16 0.00
907 1 0.00
908 3 0.00
910 3 0.00
911 3 0.00
912 96 0.01
913 102 0.01
914 269 0.03
915 4 0.00
916 3 0.00
917 3 0.00
918 16 0.00
920 5 0.00
921 5 0.00
922 179 0.02
923 52 0.01
924 158 0.02
925 3 0.00
926 1 0.00
929 1 0.00
930 1 0.00
932 3 0.00
933 11 0.00
934 15 0.00
935 19 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGCAGGCGGGCACTACGCTGGCCAGAGA
GACGGGATGCGCAAGCCGTGGATAGATAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
CATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
TTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGGTTCAGGATTT
TTTAAAATTTTTTTCGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTT
GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
ACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCTG
GTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
GCCCGAGCCCAGCATGTGCTGACGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTC
CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCG
CTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTCT
GATCCTGCTGCCGTAACCCTCAGTCCAGTCTAATCTTAGACTGGGAATGAACTCC
Found at i:16756893 original size:26 final size:26
Alignment explanation
Indices: 16756855--16756907 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16756845 CTGGTCCAAT
*
16756855 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
16756881 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
16756907 C
1 C
16756908 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTTCGTATG
Found at i:16757808 original size:26 final size:26
Alignment explanation
Indices: 16757779--16757831 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16757769 CTGGTCCGAT
* *
16757779 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16757805 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16757831 C
1 C
16757832 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16760438 original size:25 final size:25
Alignment explanation
Indices: 16760404--16760475 Score: 135
Period size: 25 Copynumber: 2.9 Consensus size: 25
16760394 TTGATCGTAG
16760404 ACTGGGAATGAACTCCGTATGCTAC
1 ACTGGGAATGAACTCCGTATGCTAC
16760429 ACTGGGAATGAACTCCGTATGCTAC
1 ACTGGGAATGAACTCCGTATGCTAC
*
16760454 ACTGGGAATGAACTCCATATGC
1 ACTGGGAATGAACTCCGTATGC
16760476 CTAAGTCAAC
Statistics
Matches: 46, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
25 46 1.00
ACGTcount: A:0.29, C:0.24, G:0.24, T:0.24
Consensus pattern (25 bp):
ACTGGGAATGAACTCCGTATGCTAC
Found at i:16761342 original size:26 final size:26
Alignment explanation
Indices: 16761291--16761343 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16761281 CCGATCTGAT
* *
16761291 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAACGAACTCCATATG
*
16761317 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCATATG
16761343 C
1 C
16761344 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCATATG
Found at i:16763117 original size:26 final size:26
Alignment explanation
Indices: 16763066--16763118 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16763056 CTGATCCAAT
*
16763066 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16763092 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
16763118 C
1 C
16763119 CTAAGTAAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16764850 original size:26 final size:26
Alignment explanation
Indices: 16764799--16764851 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16764789 CCGATCCGAT
* *
16764799 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAACGAACTCCATATG
*
16764825 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCATATG
16764851 C
1 C
16764852 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCATATG
Found at i:16765726 original size:26 final size:26
Alignment explanation
Indices: 16765675--16765727 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16765665 CTGGTCTGAT
*
16765675 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16765701 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16765727 C
1 C
16765728 CTAAGTAAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16766616 original size:26 final size:26
Alignment explanation
Indices: 16766565--16766617 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16766555 CTGGTCTGAT
*
16766565 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16766591 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16766617 C
1 C
16766618 CTAAGTAAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16770144 original size:26 final size:26
Alignment explanation
Indices: 16770115--16770165 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16770105 GGTTCGATCC
*
16770115 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACGCCGTATGCT
*
16770141 TAGACTGGGAATGAGCGCCGTATGC
1 TAGACTGGGAATGAACGCCGTATGC
16770166 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.20, G:0.31, T:0.24
Consensus pattern (26 bp):
TAGACTGGGAATGAACGCCGTATGCT
Found at i:16771049 original size:26 final size:26
Alignment explanation
Indices: 16771013--16771065 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16771003 CTAGTCAGAT
* *
16771013 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
*
16771039 CTTAGACTGGGAACGAACTTCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16771065 C
1 C
16771066 CTAAGTGAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16773757 original size:26 final size:26
Alignment explanation
Indices: 16773728--16773780 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16773718 CAAGTCCGAT
16773728 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16773754 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16773780 C
1 C
16773781 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16774004 original size:903 final size:903
Alignment explanation
Indices: 16763941--16775930 Score: 15252
Period size: 903 Copynumber: 13.4 Consensus size: 903
16763931 TCTGATCTAT
** * *
16763941 ACTGGGAATGAACTTTGTATGCGTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* *** *
16764006 AGAGGGGCGGGATGCGCAAGCCGGGGATCAACCGGGTCCCCCTCTGAGTGCTGTCC-ATCCTGCT
66 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTG-CCGATCCTGCT
* * * * * * * *
16764070 GCCGCAAACCTCGATCCGATTTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGGCAACCGA
130 GCCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * *
16764135 CGAAACGA----GCGGACGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATACGCAAGCCA
195 CGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
16764196 TGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTACATGCCAATGCCATTTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
16764261 TATGCCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
325 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
** * * ** **
16764326 CGTTTTCTATTTTTCATAATTTTAGAAACTTTTTACGGTTCAAGATTTTTTTAAAATTTTTTCAA
390 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGA-TTTTTTAAAATTTTTTCGG
* *
16764391 AAGGAGTTTTGGCCCC-AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAGGCATAAAAAAA
454 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
16764455 TTCAGCTAAAAACTCGAATTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAAA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16764520 CACTTTAATGGCTACTGACAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16764585 TCGAGGTTTGATGA--G----GGGG-----ATAAGGGCCAAGTACTAGCACCCATCACACATCAT
649 TCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * * *
16764639 GTGCGCACACCCCCTCGGCCCCCCCGAATAC--CAAAACCCCAGTGCCGCCGGTTAGGTTCTCTG
714 GTGCGCACACCCCCCCGG-CCCCCCG-AT-CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * ** *
16764702 ACGATGCTCCGGTGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCTCGAGCCCAGC
776 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* * * * *
16764767 ATGTGCTGTCACAACCCTC-GATC-CGATCCGATCTTAGACTGGGAATGAACTTCATATGCTTAG
841 ATGTGCTGCCGCAACCCTCAG-TCTAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * *
16764830 ACTGGGAACGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGTGTACGGGTGCTCAACCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
** * * * * * * *
16764895 AGAGGGGTGGGATGTGCAAGCTGAGGATCGGCCGGGTCCCCGTCTGTGTGCTACCGATCCTGCTG
66 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
*** * * * * *
16764960 TTGCAACCCTC-GATCTGGTCTGAACTTAGATTGGGAATTAACTCCGTATGCCTAAGCAAACCGA
131 CCACAACCCTCGGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* ** *
16765024 TGAAACGA----GCGGGCGGGCGGGC--G---TAC-TCAACCAGAG-G-C--GATGCGC-AGTCG
195 CGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
16765074 TGGA-AGATAGGGTGGTAGGTGGGTTTAGGCACAACTTCATATTCCTGCATGCCAATTGGCCA-T
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA-T-GCCATT
16765137 TTTATGGCTTGTAAATTCA-ACCAATGGGTCCCTTAAGCCATTCACGTGAAGGTTTCATGGCAAG
323 TTTATGGCTTGTAAATTCATA-CAAT-GGTCCCTTAAGCC-TTCACGTGAA-GTTTCATGGCAAG
* * * *
16765201 ACGACT-GGTTTCTATTTTTTC-CGATTTTCCGAAACTTTTTACGGTTCAGGATTTTTTAAAATT
384 ACGACTCGTTTTCTA-TTTTTCACGATTTT-TGAAACTTTTTGCGGTTCGGGATTTTTTAAAATT
** * *
16765264 TTTTTAGAAGGATTTTTGGCCCCAAACTTGGGTAGACGT-ATCCTTGTATTTTTTTTGGCATGCA
447 TTTTCGGAAGGAGTTTTGGCCCCAAACTT-GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * *
16765328 AAAAAAAATTCAGCT-AAAACT-AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCA
511 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
16765391 ATTTCAGACATTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGT
576 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
16765456 GTGAGTTCTCGAGGTTTGATGAGAGAT-AGGTGGCCAATATAAGGGACAAGTACCAGCACCCATC
641 GTGAGTTCTCGAGGTTTGATGAGGGATAAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
16765520 GCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTTAGGT
705 GCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* *
16765584 TCTCCGGCGA---T---G-G-T--CG-CCCG-CGAAGAAAAATGCGGCACCAGCACATGCCCGAG
770 TCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAG
* * * *
16765637 CCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
835 CCCAGCATGTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
16765702 TTAG
900 TTAG
* * * ** * ***
16765706 ACTGGGAATGAACTTCATATGCCTAAGTAAACCCACGAAATAAGCGTGCGGGCGCTCTGTCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * * * *
16765771 AGAGGGGC-GAGATGCTCAAGCAGGGAATTGGTCGGGTCCCCCTCTTCGTGCTGCCGATCCTGTT
66 AGAGGGGCAG-GATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
** * * * *
16765835 GCCGTAACCCTCGGTCCGATTTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGA
130 GCCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * * * *
16765900 TGAAATGAGCGGGCGGGAGGGTGGGCGGGCACTAC-ACTAGCCAGAGAGACGGGATGCGCAAGTC
195 CGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTC-GGCCAGAGAGACGGGATGCGCAAGCC
* * *
16765964 GTAGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
16766029 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
324 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* *
16766094 TCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTCAAAATTTTTTCGG
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
16766159 AAGGAGTTTTGGACCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
454 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
16766224 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16766289 CATTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16766354 TCGAGGTTTGTTGAGAGAT-AGGTGGCCAATATAAGGGACAAGTACCAGCACCCATCGCACATCA
649 TCGAGGTTTGATGAGGGATAAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
16766418 TGTGCGCACA-CCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCTCCGGC
713 TGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* *
16766482 GA---T---G-G-T--CG-CCCG-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
778 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * * * *
16766535 GTGCTGTCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
843 GTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * ** * *
16766596 ACTGGGAATGAACTTCATATGCCTAAGTAAACCCACGAAATAAGCGTGCGGGCGCTCAGCCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * *
16766661 AGAGGGGC-GAGATGCTCAAGCAGGGAATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGTT
66 AGAGGGGCAG-GATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
** * * *
16766725 GCCGTAACCCTCGGTCCGGTTTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGA
130 GCCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * *
16766790 TGAAATGAGCGGGCGGGCGGGTGGGGCGGGCACTAC-ACTAGCCAGAGAGACGGGATGCGCAAGC
195 CGAAACGAGCGGGCGGGCGGG-CGGGCGGGCACTACGTC-GGCCAGAGAGACGGGATGCGCAAGC
* * *
16766854 CGTAGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCTTATTTCTGCATGCCAATGCCATT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* * *
16766919 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGAAGA
323 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
16766984 CTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTCTTTAAAATTTTTTCG
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG
* * *
16767049 AAAGGAGTTTTAGCCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAC
453 GAAGGAGTTTTGGCCCC-AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
16767114 AATTCAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
517 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16767178 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGT
582 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
16767243 TCTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGTCAAGTACCAGCACCCATCACACATC
647 TCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
16767308 ATGTGCGCACA-CCCCCCGGCCCCCTTGATCGTCAGAATCCCAATGCCGCCGGTCAGGTTCTGCG
712 ATGTGCGCACACCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * * *
16767372 GTGATGCTCCGACGATGGTGCCCCGACGAAGAATAATGCAGCACCAGCACATGCCTGAGCCCAGC
776 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* * *
16767437 ATCTGCTACTGCAA-CC-C--TC--G---G-TC-----C--GG--T---CT--G-AT-CTTAG
841 ATGTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * * * *
16767474 ACTGGGAATGAACTCTGTATCCCTAAGTCAATCGACAAAACGAGCGTGC-GGTCGCTCAGCCGGC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGT-GCTCAACCGGC
* * * *
16767538 CAGAAGGGTG-A-GATGCGTAAGCCGGGGATCAGTCGGGTCCCGCTCTACGTGCTGCCGATCCTG
65 CAG-AGGG-GCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * * * * * *
16767601 CTACCGCAACCCTCAGTCCGATCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACC
128 CTGCCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * ** *
16767666 GATGAAATGAGCGGGCTGGCGGGCGGGCGGGCACTGTGCCGGCCAGAGAGACGGGATGCGCAAGC
193 GACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
*
16767731 CGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
16767796 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
323 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
16767861 CTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTCAAAATTTTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG
* * *
16767926 GAAGGATTTTTGGACCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
453 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
16767991 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
518 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16768056 ACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGTGGTGTGAGTT
583 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * * *
16768121 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTAAATCA
648 CTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
16768186 TGTGCACACA-CCCCTCGGCCCCCCCGATCATCGAAAACCCAATGCCG-C---CA-G-T-T--AG
713 TGTGCGCACACCCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * * * * *
16768241 -G-TTCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGCTGCACCAGCACATGTCCGAGCCTAGCA
777 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* * *
16768304 TGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCTTATGCTTAG
842 TGTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * *
16768366 ATTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* **
16768431 AGAGGGGC-GGAATGCGCAAGCCGGGGATC-GTCGGGTCCCCCTCTACGTGCTGCCGATCCTATT
66 AGAGGGGCAGG-ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * * *
16768494 GCCATAACCCTCAGTCCGGTTTGATCTTAGACTGGGAATGAACTCC-TATGCCTAAGCCAACCGA
130 GCCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * ** * * **
16768558 -GGAA--A-CGTGCGGGCGTGCAAGCGGGCACTACGTCGGCCAGAGAGACGAGATGCGCACGATG
195 CGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
* * **
16768619 TGGATCGATAGGTTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * * ** * *
16768684 TATGGCTTGTAAATTCATACAACGGTTCTTTAAAACTTCATGTGAAGTTTAATGGCAAGACGACT
325 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
16768749 CGTTTTTTTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGA
390 CG-TTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
16768814 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCATGTATTTTTTTTGGCATGCACAAAAAAA
454 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
16768879 TTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTTAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16768944 CACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTTAAGGGGGTGCGAGTT
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTT
* * * *
16769009 CTCGAGGTTTGATGAGGGAT-AGGGTCTAATATAAGGGCCAAGTACCAGCACTCATCGTACATCA
648 CTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
*
16769073 TGTGCGCACAACTCCCCCCGGCCCCCCTGATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTCC
713 TGTGCGCAC-AC-CCCCCCGGCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
** * * * * *
16769138 GGCGATGCTCTAGCGATGGTGCCCTGGCAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAG
775 GGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAG
* *
16769203 CATGTGCTGTCACAA-CC-C--TC--G---G----T---CT-GG--T----T-CG-AT-CTTAG
840 CATGTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * *
16769241 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAATGAGCGTGCGGGCGCTCAGCCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * * * *
16769306 AGAGGGGCGGGATGCGCAAGCCGGGGATAGGTCGGGTCCCCTTCTGCGTTCTGCCAATCCTACTG
66 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
* * *
16769371 CCACAACCCTTGGTACGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
131 CCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * *
16769436 GAAACGAGTGGACGGGCGGGCGGGCGGGCACTACGTTC-GCCAGAGAGACGGGATGTGCGAA-CC
196 GAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACG-TCGGCCAGAGAGACGGGATGCGC-AAGCC
* * *
16769499 GTGGATCGATATGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTTTGCATGCCAATGCCATTT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
16769564 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCACGGCAAGACGAC
324 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * **
16769629 TCATTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTTAGGATTTTTTAAAATTTTTTCGG
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
** *
16769694 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGTGTGGA-AAAAAAA
454 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
16769757 TTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16769822 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATGTTAAATGCTCTTTAAGGGCGTGTGAGTTC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16769887 TCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCACACATCAT
649 TCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * * * * *
16769952 GTGTGCAAACCCCCCCCGACCGCCTCGATCGCCGAAAACTCAATGCTGCCGGTCAGGTTCTCTGG
714 GTGCGCACA-CCCCCCCGGCC-CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * ** * *
16770017 CGATGCTCCGGCGATGGAGCCTCGGGGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCA
777 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* * * * * * ** * *
16770082 TATGCTACCGTAATCTTTAGTCCGGTTCGATCCTAGACTGGGAATGAACTCCGTATGCTTAG
842 TGTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * *
16770144 ACTGGGAATGAGCGCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGGC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * * *
16770209 AAAGGGGC-GGAATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTTCGTGCTGTCGATCTTGCT
66 AGAGGGGCAGG-ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
** * * * ** * *
16770273 TTCATAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTACGCCAATCGA
130 GCCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
** * *
16770338 CGAAACGA----GCGGGCGGATGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCG
195 CGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
**
16770399 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCACACCAATGCCATTTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
16770464 TATGGCATGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
325 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* ** * * *
16770529 CGTTTTCTATTTCTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTTGGA
390 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * * * * *
16770594 AGGTGTTTTGGCCCCAAACTTAGTAGACATGATCCTTGTATTTTTTTTGGCATGCATAAAAAACT
455 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
16770659 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGAA
520 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* **
16770724 ACTTTAATGGCTACTGGCAGCAAACCTCTAAAATCTCAAATGCTCTTTAAGGCAGTGTGAGTTCT
585 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
16770789 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
650 CGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * * * *
16770854 CGCGCACACCCCCTCGGCCCCCCCGATTGTCGGAACCCCAATGTCGTCGATCAGGTTCTCCGACG
715 TGCGCACACCCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
** * ** ** * *
16770919 ATGCTCCGAAGATGGTGGCCCGGTGAACCAAAATGCAGCACCAACACATGCTCGAGCCCAGCATG
779 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * *
16770984 TGCTGCCGCAACCCTCGGTCTAGTCAGATCTTAGATTGGGAATGAACTCCGTATGCTTAG
844 TGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * * ** *
16771044 ACTGGGAACGAACTTCGTATGCCTAAGTGAACCCACGGAACGAGAATGCGGGTGCTCAACTGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
*** * ** * *
16771109 AGAGGGGCAGGATGCGCAAGTCAACGCATCGACCGGCTCCCCCTCTGCATGCTGCCGATCCTGCT
66 AGAGGGGCAGGATGCGCAAG-CCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * *
16771174 GTCACAACCCTCGG-TCTGATCTGATCTTACACT-GGAACTGAACTCCGTATGCCTAAGCCAACC
130 GCCACAACCCTCGGTTC-GGTCTGATCTTAGACTGGGAA-TGAACTCCGTATGCCTAAGCCAACC
* * * * * *
16771237 GACGAAACGAGCAGGCGGGCGGGCAGGCGGGCACTATGCCGACCGGAGAGACGGGATGCGCAAGC
193 GACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * *
16771302 CGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCCTATTTCTGCATGCCAATGCCTTT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* **
16771367 TTTATGGCTTGTAAATTCCTACAATGGTCCCTTAAGTGTTCACGTGAAGTTTCATGGCAAGACGA
323 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* ** *
16771432 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTC
388 CTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
* * *
16771497 GGAAGGACTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAA
452 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* ** * *
16771562 AATTTAGCTAAAAACTTAAAGTGTACAAGATTTTGTGACCATTTAAAAAAAATGTCCCCATTTCA
517 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
16771627 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
582 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
16771692 TCTCGAGGTTTGATGAGGGAT-AGAGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGCACAT
647 TCTCGAGGTTTGATGAGGGATAAG-GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *** ** **
16771756 CATGTGCGCACGCCGCTCTTTGGCCCCCCCGATCACCGGAACCCCAATGCCGTTGGTCAGGTTCT
711 CATGTGCGCACACC-C-CCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * *
16771821 CCGGGGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCC
773 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
* * * * *
16771886 AGCATGTGCTGCCGCAACCCTCATTCCAATCCGATCTTAGATTCGGAATGAACTCCGTATGCTTA
838 AGCATGTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
16771951 G
903 G
* * * * * * **
16771952 ACCGGGAGTGAACTCCGTACGACTAAGTCAAACCACGAAACGAGGGTGCGGGTGCTCAGTCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * * * ***
16772017 AGAGGGGC-GAGATGTGCAAGTCGGGGATCGATCGGGTTCCCCTCTGCATGCTATTGATCCTGCT
66 AGAGGGGCAG-GATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
** ** *
16772081 GCCGTAACCCTC-AATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCG
130 GCCACAACCCTCGGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * **
16772145 ACGAAACGAACGGGTGGGCAGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCC
194 ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
*
16772210 GTGGATCGATAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
16772275 TAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCCTCACGTGAAGTTTCATGGCAAGACGAC
324 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * *
16772340 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGGTCGGGATTTTTTAAAATTTTTACGG
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
16772405 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAA
454 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16772470 TTCAGCTAAACACTCGAAGTGTACAAGATTTTGTGACCATTTGAACAAAGTGTCCCCATTTCAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
16772535 CACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16772600 TTGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
649 TCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * * * * *
16772665 GTGCGCACACCCCCCCGACCCCCCTGACCGCCAGAACCCCATTACTGTCGGGCAGGTTCTCCGGT
714 GTGCGCACACCCCCCCGGCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * * * *
16772730 GATGCTCCGGCAATGGTGGCCCGATGAAGAAAAAAGCAGCACCAACACATGCCTGAGCCCAGCAT
778 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * * *
16772795 GTTCTGCCGCAACCTTC-GATCTAGTCCGATCTTCGACTGGGAATGAACTCCATATGCTTAG
843 GTGCTGCCGCAACCCTCAG-TCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * *
16772856 ACTGGGAATGAGCTCCATATGCCTAAATCAACCCACGAAACGAGCGTGCGGGTGCTCAACTGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * * * *
16772921 AGAGGGACGGGATGCGTAAGCTGGGGATCGG-CTGAGTCCCCCTCTGCGTGCTGCTGATCCTGCT
66 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
** * * *
16772985 GCCGTAACCCTCGATTAGGTATGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
130 GCCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * *
16773050 CAAAACGAGCGGGCAGACGGG-GGGCCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
195 CGAAACGAGCGGGCGGGCGGGCGGG-CGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
*
16773114 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTGCATGCCAATGCCATTT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
*
16773179 TAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
324 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* *
16773244 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGG
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
*** * * *
16773309 AAGGAGTTTTTAACCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAACAA
454 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16773374 TTCAGCTAAAAACTCGTAGTGTAGAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16773439 CACTTTAAGGGCTACTGGCAGCAAACCTGTAAAATCTC-AATGCTCTTTAAGGGGGTGCGAGATC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16773503 TTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCAT
649 TCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * * * *
16773568 GTGCGCACACCCCCCCGACCCTTTCGATCGTCGGAACCCCAGTACCGTCGGTCAGGTTCTCCGAC
714 GTGCGCACACCCCCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * *
16773633 GATGCTCCAGTGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCTAGCAT
778 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * *
16773698 GTGCTGCTGCATCCCTCAGTCAAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
843 GTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * ** * *
16773759 ACTGGGAATGAACTTCGTATGCCTAAGTCAACACATGAAACGAATGTGCGGGTGCTCAGCCGGTC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * * * * *
16773824 AGAGGGGCAGGATGCACAAGTCGGGGATCGGCCAGGTCCCCCTCCGCATGCTGCCAATCCTGCTG
66 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
*** * * * *
16773889 CTGGAACCCTCGGTTCAGACCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGAC
131 CCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * *
16773954 AAAATGAGCAGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
196 GAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
* * * *
16774019 GGATCGATAGGGCGGTAGGTGGGTTTAGGTACATCTTCATATTTTTGCGTGCCAATGCCATTTTT
261 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
*
16774084 ATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
326 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* *
16774149 GTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAA
391 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAA
** * *
16774214 ACAGTTTTGGCCCCAAACTTGGTAGACTTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATT
456 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
*
16774279 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCATACA
521 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * * * *
16774344 CTTTTATGGCTAATGGCTGCAAACCTGTAAAATCTCAAATGCTCTTCAAAGGGGTGTGAGTTCTG
586 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
16774409 GAGGTTTGATGAGGG-T-AGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
651 GAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * * *
16774472 GCACACACCCCCACAGCACCCCCGATCGTCGGATCCCCAATGCCGCCGATCAGGTTCTCCGGTGA
716 GCGCACACCCCCCCGGC-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
* * * * ** *
16774537 TGCTCTGGTGATGGTGCCCTGACGAAGAAAAATGCGACATAAACACATGCCCGAGCCCAGGATGT
780 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGT
* * * * * * *
16774602 GCTGCCGTAACCCTCGGTCCAGTCTGATCTTGGA-TCAGGAATGAACTCCCTATGCTTAG
845 GCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACT-GGGAATGAACTCCGTATGCTTAG
* * * * * *
16774661 ACTAGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGTGCTCAATCGACC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * * * *
16774726 AGAGAGGCGGGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCCATCCTGCTA
66 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
* *
16774791 CCACAACCCTCGG-TCTGGTCTGATCTTAGACTGGGAATGAACAT-CGTATGCGTAAGCCAACTG
131 CCACAACCCTCGGTTC-GGTCTGATCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGCCAACCG
* * * ** * * * * *
16774854 TCGAAACGAGTGGGCGGGTGGGTAGGTGGGCACTAAGTCGTCCAGAGAGACGGGATACGCAAGTC
194 ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
16774919 GTGGATCGATAGGGTTGTAGGTGAGTTTAGGCACATCTTCATATATTCTACGTGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTGCATGCCAATGCCATT
*
16774984 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCGTCACGTGAAGTTTCATGGCAAGACGA
323 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
16775049 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGGTCGGGATTTTTTAAAATTTTTACG
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG
* *
16775114 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACA
453 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
16775179 ATTCAGCTAAACACTCGAAGTGTACAAGATTTTGTGACCATTTGAACAAAGTGTCCCCATTTCAG
518 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16775244 ACACTTTAATGACTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
583 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
16775309 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
648 CTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
16775374 TGT--GCACA-CCCCCCGGCCCCCCCGATCGTCGGATCCCCAATGCCACCGATCAAGTTCTCCGA
713 TGTGCGCACACCCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * * *
16775436 CGATGATCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCTGAGCCAAGCA
777 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* ** *
16775501 TGTGCTGCCGCAACCCTCGGTCTAGTCTTATCTTAGACTGGGAATGAACTCCATATGCTT-G
842 TGTGCTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * *
16775562 ATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACCAAACGAGCGTTCGGGTGCTCAATCGGCC
1 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
* * * *
16775627 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCTTGCTT
66 AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
* ** * * **
16775692 TCACAACATTCAGTTCGGTCTGATCTTAG-CTAGGAACAAACTCCGTATGCCTAAGCCAACCGAC
131 CCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * *
16775756 GAAACGA--------GCGGTCGGGCGGGCACTACGTCGACCAGAGAGATGGGATGCGCAAGCCAT
196 GAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
** * ** * * **
16775813 GGATCGATAGGGTGAAAGGTGGGTTTCGGCATGTCTTCATATTTCTACGTGCCAATTTCATTTTT
261 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* *
16775878 ATGGCTTGTAAATTCAAACAATGGTCCCTTATGCCTTCACGTGAAGTTTCATG
326 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
16775931 CCATTTTTGT
Statistics
Matches: 9786, Mismatches: 1111, Indels: 406
0.87 0.10 0.04
Matches are distributed among these distances:
866 63 0.01
867 3 0.00
868 2 0.00
870 3 0.00
871 1 0.00
872 2 0.00
873 2 0.00
875 93 0.01
876 376 0.04
877 658 0.07
878 383 0.04
879 154 0.02
880 177 0.02
881 249 0.03
882 18 0.00
883 10 0.00
884 6 0.00
885 11 0.00
886 173 0.02
887 284 0.03
888 197 0.02
889 224 0.02
890 672 0.07
891 616 0.06
892 294 0.03
893 4 0.00
894 6 0.00
895 4 0.00
896 2 0.00
897 3 0.00
898 4 0.00
899 267 0.03
900 266 0.03
901 499 0.05
902 607 0.06
903 1345 0.14
904 784 0.08
905 247 0.03
906 561 0.06
907 291 0.03
908 225 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (903 bp):
ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCC
AGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
CCACAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
GAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAA
GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT
GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
CTGCCGCAACCCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
Found at i:16776341 original size:26 final size:26
Alignment explanation
Indices: 16776312--16776364 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16776302 CCGATCCGAT
*
16776312 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16776338 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16776364 C
1 C
16776365 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16778110 original size:26 final size:26
Alignment explanation
Indices: 16778081--16778133 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16778071 TTGATCCGGT
*
16778081 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16778107 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16778133 C
1 C
16778134 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:16778500 original size:893 final size:892
Alignment explanation
Indices: 16777215--16779459 Score: 3014
Period size: 893 Copynumber: 2.6 Consensus size: 892
16777205 ATGGTCCGAT
* * *
16777215 CTTAGACTGGGAATGAACTCCGTAAGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * *
16777280 CAGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGTCGAGTCCCCTCTGTGTGCTGCCGATCCT
66 CAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGAGTCCCCTCTATGTGCTGCCGATCCT
* * * *
16777345 ACTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCC-TATAACTAAGCCAAC
131 ACTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAAC
* * * * *
16777409 CGACGAAATGAGCGGGCGGGCGGGCGGGCAGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAG
196 CGACGAAATGAGCAGGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAAAGACGGGATGCGCAAG
* * *
16777474 CCGTGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACACGCCAATGCCAT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
*
16777539 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACACG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * *
16777604 ACTCGTTTTCTATTTTTCACGATTTTTGAAAATTTTTACAGCTCGAGATTTTTTAAAATTTTTTC
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
*
16777669 GAAAGAAGTTTTGGCCCGAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAAA
456 GAAAGGAGTTTTGGCCCGAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAAA
*
16777734 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGGTGTCCCCATTTCA
521 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-GTGTCCCCATTTCA
*
16777799 GACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGT
585 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGT
* * * * *
16777864 TCTCAAGGTTTGGTGAGGGATAGGGGGTCAATATGAGGGCCAAGTACCAGCACCCATCGCACATT
650 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
*
16777929 ATGTGCGCACACCCCACTCGGCCCCCCCGATCG-CAGGAACCCCAATGCCGTCGATCAAGTTCT-
715 ATGTGCGCACACCCC-C-CGGCCCCCCCGATCGCCAGGAACCCCAATGCCGTCGGTCAAGTTCTC
* *
16777992 T-CGGCGATGGTGGCCCGACGAAGAAACATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCT
778 TACGGCGATGGTGCCCCGACGAAGAAAAATGC-ACACCAGCACATGCCCGAGCCCAGCATGTGCT
** *
16778056 GCCGCAACCCTCGGTTTGATCCGGTCTTAGACTGGGAATGAACTCCGTATG
842 GCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16778107 CTTAGACTGGGAATAAACTCCGTATGCCTAAGTTAACCCACGAAACAAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * * *
16778172 CAGCTAGAGTGGCGGGATGCACAAGCTGGGGATC-GACGGAGTCCCCTCTATGTGCTGCCGATCC
66 CAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTC-GAGTCCCCTCTATGTGCTGCCGATCC
* * ** * *
16778236 TAATGTCC-CAACGTTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCA
130 TACT-ACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCA
* * *
16778300 ACCGACGAAATGACCAGGCAAGTGGGCGGGCGGGCACTACGCCGGCCAGAAAGACGGGATGCGCA
194 ACCGACGAAATGAGCAGGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAAAGACGGGATGCGCA
* *
16778365 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTCTGCGTGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
16778430 ATTTTTATGGCTTCTAAATTCACACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
16778495 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * *
16778560 TCGGAAGGAGTTTTGGCTCGAAACTTTGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAA
454 TCGAAAGGAGTTTTGGCCCGAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAA
*
16778625 AAATTCAGCTAAAAACTCGAAGTATACAAGATTCTT-TGACCATTTGAAAAAAGTGTCCCCATTT
519 AAATTCAGCTAAAAACTCGAAGTGTACAAGATT-TTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
16778689 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGA
583 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGA
*
16778754 GTTCTCGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
648 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * * * *
16778819 TCATGTGCGCACACCCCTCTGGCCACCCCTATCGTC-GGAACCCCATTGTCATCGGTC-AGGT-T
713 TCATGTGCGCACACCCC-CCGGCCCCCCCGATCGCCAGGAACCCCAATGCCGTCGGTCAAGTTCT
* *
16778881 CT-C--CGATGATGCTCCGAC---G----AT-------AG----TGCCTCGA---C-G-ATGTGC
777 CTACGGCGATGGTGCCCCGACGAAGAAAAATGCACACCAGCACATGCC-CGAGCCCAGCATGTGC
* *
16778920 TGCTC-TAACCCTCGGTCCGATCTC-ATCTTAGACTAGGAATGAACTCCGTATG
841 TGC-CGCAACCCTCGGTCCGATC-CGATCTTAGACTGGGAATGAACTCCGTATG
* * * **
16778972 CTTATACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCCCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * * * *
16779037 CAGCCAGAGGGGCGGGATGCCCAAGCTGGGGATCAGTTGGGTCCCCT-TCTGCTTGCTGTCGATC
66 CAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGAGTCCCCTCTATG--TGCTGCCGATC
* * * * * *
16779101 CTGCTATCGCAACCCTCAGTCCGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
129 CTACTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCA
* *
16779166 ACTGACGAAAT--G-A-GCGAGCGGGCGGGCGGGCACTACACCGGCCA-AAGAGACGGGATGCGC
194 ACCGACGAAATGAGCAGGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAA-AGACGGGATGCGC
* ** *
16779226 AAGCCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTTATGCTAATGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* * * * * *
16779291 CATTTTTACGGCTTGTCAATTCTTACAAAGGTCCCTTATGCCTTCACGTGAAGTTTCATGGTAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
** * * *
16779356 AATACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATATT
388 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAT-TT
* * *
16779421 TTT-GAAAGGATTTTTGGCCCTAAACTTAGTAGACATGAT
452 TTTCGAAAGGAGTTTTGGCCCGAAACTTGGTAGACATGAT
16779460 GCGCAAGCTG
Statistics
Matches: 1209, Mismatches: 129, Indels: 60
0.86 0.09 0.04
Matches are distributed among these distances:
861 2 0.00
862 245 0.20
863 6 0.00
864 3 0.00
865 146 0.12
866 75 0.06
867 1 0.00
869 4 0.00
870 3 0.00
873 2 0.00
881 2 0.00
885 1 0.00
888 12 0.01
889 1 0.00
890 5 0.00
891 31 0.03
892 304 0.25
893 364 0.30
894 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (892 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
CAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGAGTCCCCTCTATGTGCTGCCGATCCT
ACTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAAC
CGACGAAATGAGCAGGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAAAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
GAAAGGAGTTTTGGCCCGAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCACACCCCCCGGCCCCCCCGATCGCCAGGAACCCCAATGCCGTCGGTCAAGTTCTCTAC
GGCGATGGTGCCCCGACGAAGAAAAATGCACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
CAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16778975 original size:26 final size:26
Alignment explanation
Indices: 16778946--16778998 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16778936 CCGATCTCAT
16778946 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
16778972 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16778998 C
1 C
16778999 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16779863 original size:407 final size:404
Alignment explanation
Indices: 16779052--16779866 Score: 1091
Period size: 407 Copynumber: 2.0 Consensus size: 404
16779042 AGAGGGGCGG
* * * *
16779052 GATGCCCAAGCTGGGGATCAGTTGGGTCCCCTTCTGCTTGCTGTCGATCCTGCTATCGCAACCCT
1 GATGCCCAAGCTGGGGATCACTTGGGTCCCCTTATGC-TGCTGTCGATCCTACTACCGCAACCCT
* * * * *
16779117 CAGTCCGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAATGAGCG
65 CAGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCCAACCGACAAAACGAGCG
* * * * *
16779182 AGCGGGCGGGCGGGCACTACACCGGCCAAAGAGACGGGATGCGCAAGCCGTGTATCGATAGGGTG
130 AGCGGGCGGGCGGGCACTACACCGGCCAAAGAGACAGGATGCGCAAGCCATGGATCCATAGGATG
* * * ** * *
16779247 GTAGGTGGGTTTAGGCACATCTTCATATTTCTTTATGCTAATGCCATTTTTACGGCTTGTCAATT
195 CTAGGTGGGTTTAGGCAAATATTCATATTTCTGCATGCCAATGCCATTTTTACGGCTTGTAAATT
* * * *
16779312 CTTACAAAGGTCCCTTATGCCTTCACGTGAAGTTTCATGGTAAGAATACTCATTTTCTATTTTTC
260 CATACAAAGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAAGACTCATTTTCTATTTTTC
* * *
16779377 ACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATATTTTTGAAAGGATTTTTGGCCCT
325 ACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATATTTTTCAAAGGAGTTTTGGCCCA
16779442 AAACTTAGTAGACAT
390 AAACTTAGTAGACAT
* *
16779457 GATGCGCAAGCTGGGGATCAACTT-GGTCCCCTCTATG-TGCTG-CTGATCCTACTACCGTAACC
1 GATGCCCAAGCTGGGGATC-ACTTGGGTCCCCT-TATGCTGCTGTC-GATCCTACTACCGCAACC
* * * *
16779519 CTCGGTCCGGTCCGATCTTAGA-TAGGGAATGAACTTCGTATCCCTAAGCCAACCGACAAAACGA
63 CTCAGTCCGATCCAATCTTAGACT-GGGAATGAACTCCGTATCCCTAAGCCAACCGACAAAACGA
* * *
16779583 GCGAGCGGGCGGGCGGGGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCTATGGATCCAT
127 GCGAGCGGGCGGGC---GGGCACTACACCGGCCAAAGAGACAGGATGCGCAAGCCATGGATCCAT
*
16779648 AGGATGCTAGGTGGGTTTAGGCAAATATTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
189 AGGATGCTAGGTGGGTTTAGGCAAATATTCATATTTCTGCATGCCAATGCCATTTTTACGGCTTG
* * * * *
16779713 TAAATTCATACAATGGTCCCTTAAGCCTTGACGTGAAGTTTCATGGCAAGACGGCTCGTTTTCTA
254 TAAATTCATACAAAGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAAGACTCATTTTCTA
* * *
16779778 TTTTTCATGATTTTTGAAACTTTTTGTGGTTCAGGATTTTTTAAAAT-TTTTTCAGAAGGAGTTT
319 TTTTTCACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATATTTTTCA-AAGGAGTTT
*
16779842 TGGCCCAAAACTTCGTAGACAT
383 TGGCCCAAAACTTAGTAGACAT
16779864 GAT
1 GAT
16779867 CCTTGTATTT
Statistics
Matches: 355, Mismatches: 47, Indels: 14
0.85 0.11 0.03
Matches are distributed among these distances:
403 2 0.01
404 87 0.25
405 26 0.07
406 12 0.03
407 228 0.64
ACGTcount: A:0.24, C:0.21, G:0.24, T:0.30
Consensus pattern (404 bp):
GATGCCCAAGCTGGGGATCACTTGGGTCCCCTTATGCTGCTGTCGATCCTACTACCGCAACCCTC
AGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCCAACCGACAAAACGAGCGA
GCGGGCGGGCGGGCACTACACCGGCCAAAGAGACAGGATGCGCAAGCCATGGATCCATAGGATGC
TAGGTGGGTTTAGGCAAATATTCATATTTCTGCATGCCAATGCCATTTTTACGGCTTGTAAATTC
ATACAAAGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAAGACTCATTTTCTATTTTTCA
CGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATATTTTTCAAAGGAGTTTTGGCCCAA
AACTTAGTAGACAT
Found at i:16780264 original size:26 final size:26
Alignment explanation
Indices: 16780235--16780286 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16780225 CCGGTCTGAT
*
16780235 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16780261 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16780287 ACTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16781144 original size:26 final size:26
Alignment explanation
Indices: 16781108--16781160 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16781098 CTGGTTCGAT
*
16781108 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16781134 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16781160 C
1 C
16781161 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16781308 original size:873 final size:854
Alignment explanation
Indices: 16779832--16781862 Score: 2570
Period size: 873 Copynumber: 2.3 Consensus size: 854
16779822 AATTTTTTCA
* *
16779832 GAAGGAGTTTTGGCCCAAAACTTCGTAGACATGATCCTTGTATTTTTGTTGGCATGCAC-AAAAA
1 GAAGGAGTTTTGGCCCCAAACTTGGTA-A-ATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16779896 ATTCAGCC-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCACCATTTCAG
64 ATTCA-CCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16779960 ACACTTTAATGGCTACTGGCTGCAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTT
128 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
16780025 CTCGAGGTTTGATGAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
193 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
16780090 TGTGCGCACCACCCCGGCCCCCCCGATTGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCTGACG
258 TGT--GCA-CA---C--ACCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCTGACG
* *
16780155 ATGCTCCGACGAAGAAAAATACAGCCCCAGCACATGCCCGAGCCTAGCATGTGCTATCGCAACCC
315 ATGCTCCGACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCGCAACCC
*
16780220 TCGATCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
380 TCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* *
16780285 TGACTAAGTCAAACCACGAAACGAACGTACAGGCGCTCAGCCGGCCAGAAGGGCGGGATGCATAA
445 TGACTAAGTCAAACCACAAAACGAACGTACAGGCGCTCAGCCGGCCAGAAGGGCGGGATGCACAA
* * * * * * *
16780350 GTCGGGGATCAACCGGGTCCCCCTCTGCATGCTGCCAATCTTGTTGCCTCAACCCTTGATCCGGT
510 GCCGGGGATCAACCGGGTCCCCATCTGCATGCTGCCAATCCTGCTACCGCAACCCTTGATCCGAT
*** ** * *
16780415 TTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAATGAACGGGCGGGCGA
575 CCAATCTTAGACTGGGAATGAACCCCGTATGCCTAAGCCAACCAACGAAATGAACGGGCAGGC--
**
16780480 GTGGGCAGGCACTATCCCT-GCCAGAGAGACGCGATGTGCAAGCCGTGGATCGATAGGGTGGTAG
638 --GGGCAGGCACTA-CCCTGGCCAGAGAGACGCGATACGCAAGCCGTGGATCGATAGGGTGGTAG
* * * *
16780544 CTGGGTTTAGGCACATCTTCATATTTCTGCAA-GCCAATGCCATTTTTATGGCTTGTAAATTCAT
700 CTGGGTATAGACACATCTTCATACTTCT-CAATGCCAAAGCCATTTTTATGGCTTGTAAATTCAT
* * *
16780608 ATAATGGTCCCTTCAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
764 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
16780673 ATTTTCAAAACATTTTACGGTTC-G-
829 ATTTTCAAAACATTTTACGGTTCAGT
*
16780697 GAAGGAGTTTTCGCCCCAAACTTGGTAAATGCAATCCTTGTATTTTTGTTGGCATGCACAAAAAA
1 GAAGGAGTTTTGGCCCCAAACTTGGTAAATG--ATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16780762 ATTCACCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
64 ATTCACC-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
16780827 ACACTGTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATCCTCTTTAAGGAGGTGTGAGTT
128 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16780892 CTCGAGGTTTGATGAGGGATTGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
193 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
*
16780957 TGTGCACACACCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCG
258 TGTGCACACACCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCT-C--TGA-----C-
* * *
16781022 ATGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTA-CT
314 --GATGCT--CC-GACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTATC-
* * *
16781086 GCAACCCTCGGTCTGGT-TCGATCTTAGGCTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
373 GCAACCCTCGATCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * ** ** *
16781150 ACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTATGGGCGCTCAGCCGGCCAGTGGGGTGGG
437 ACTCCGTATGACTAAGTCAAACCACAAAACGAACGTACAGGCGCTCAGCCGGCCAGAAGGGCGGG
* * * * * * *
16781215 ATGCGCAAGCCGGGGATCGACCGGGTCCCCATTTGCATGCTGTCGATCCTGCTATCGGAACCCTC
502 ATGCACAAGCCGGGGATCAACCGGGTCCCCATCTGCATGCTGCCAATCCTGCTACCGCAACCCT-
* * **
16781280 T-ATCTGATCCAATCTTCA-ACTGGGAATGAACCCCGTATGCCTAAGCCAACCAATGAAATGAGT
566 TGATCCGATCCAATCTT-AGACTGGGAATGAACCCCGTATGCCTAAGCCAACCAACGAAATGAAC
* * * * * *
16781343 GTGCAGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATACGCATGCCGTGGATCGATAGGTT
630 GGGCAGGCGGGCAGGCACTACCCTGGCCAGAGAGACGCGATACGCAAGCCGTGGATCGATAGGGT
* *
16781408 GGTAGGTGGGTATAGACACATCTTCATACTTCTTAATGCCAAAGCCATTTTTATGGCTTGTAAAT
695 GGTAGCTGGGTATAGACACATCTTCATACTTCTCAATGCCAAAGCCATTTTTATGGCTTGTAAAT
*
16781473 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTT
760 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
** * *
16781538 CACGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTT
825 CACGATTTTCAAAACATTTTACGGTTCA-G----------------T
* * * *
16781585 CAGAAGGATTTTTGGCCCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
1 --GAAGGAGTTTTGGCCCCAAACTTGGTA-A-ATGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * * *
16781650 AAATTCAGCATAAAACTTGAAGTGTAGAAGATTTTATGACCATTTGAAAAAAGTGTCCTCATTTC
62 AAATTCACCA-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
16781715 AGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
126 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
16781780 TTCTCAAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
191 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
**
16781845 CATGTGTGCACACCCCCC
256 CATGTGCACACACCCCCC
16781863 CGGCCCCCCC
Statistics
Matches: 1012, Mismatches: 105, Indels: 73
0.85 0.09 0.06
Matches are distributed among these distances:
859 37 0.04
860 1 0.00
861 1 0.00
862 3 0.00
863 3 0.00
864 3 0.00
865 55 0.05
866 10 0.01
867 180 0.18
868 5 0.00
869 186 0.18
870 5 0.00
871 1 0.00
872 4 0.00
873 264 0.26
874 2 0.00
889 1 0.00
890 248 0.25
891 1 0.00
892 2 0.00
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.26
Consensus pattern (854 bp):
GAAGGAGTTTTGGCCCCAAACTTGGTAAATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCACCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCACACACCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCTGACGATGCTCCGACG
AAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCGCAACCCTCGATCCGGTC
TGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGACTAAGTCA
AACCACAAAACGAACGTACAGGCGCTCAGCCGGCCAGAAGGGCGGGATGCACAAGCCGGGGATCA
ACCGGGTCCCCATCTGCATGCTGCCAATCCTGCTACCGCAACCCTTGATCCGATCCAATCTTAGA
CTGGGAATGAACCCCGTATGCCTAAGCCAACCAACGAAATGAACGGGCAGGCGGGCAGGCACTAC
CCTGGCCAGAGAGACGCGATACGCAAGCCGTGGATCGATAGGGTGGTAGCTGGGTATAGACACAT
CTTCATACTTCTCAATGCCAAAGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACATTTTA
CGGTTCAGT
Found at i:16782793 original size:26 final size:26
Alignment explanation
Indices: 16782757--16782809 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16782747 CCGATTCGAT
16782757 CTTAGACTGGGAATGAACTCGGTATG
1 CTTAGACTGGGAATGAACTCGGTATG
16782783 CTTAGACTGGGAATGAACTCGGTATG
1 CTTAGACTGGGAATGAACTCGGTATG
16782809 C
1 C
16782810 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.30, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCGGTATG
Found at i:16783696 original size:26 final size:26
Alignment explanation
Indices: 16783667--16783719 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16783657 CCGGTCCGAT
*
16783667 CTTAGACTGGGAATG-AACTCCGTATG
1 CTTAGACT-GGAATGAAACTCCATATG
16783693 CTTAGACTGGAATGAAACTCCATATG
1 CTTAGACTGGAATGAAACTCCATATG
16783719 C
1 C
16783720 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 6 0.24
26 19 0.76
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAATGAAACTCCATATG
Found at i:16784022 original size:185 final size:184
Alignment explanation
Indices: 16783650--16784063 Score: 478
Period size: 185 Copynumber: 2.2 Consensus size: 184
16783640 AGCCGCAATG
*
16783650 CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAATGAAACTCCA
1 CCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAATGAAACTCCA
* * * * *
16783715 TATGCCTAAGTCAACCACACGGAAAGGAGCGTGTGGCCGTTATAGCCGGCACAGGGGCGGGTTGT
66 TATGCCTAAGTCAACCACACGGAAACGAGCGTGCGG-CGTGATAGCCGGCACAGGGGCGGGATGC
* * ** * * **
16783780 GCAAGCTGGGATCGGTCGGGTCCCCTCTGTGTGCTGTCGATTCTGCTGCCCCAAC
130 GCAAGCCGGGATCGGTCGGGTCCCCCCTGTGTGCTACCAATCCTGCCACCCCAAC
* * * * *
16783835 CCTCGGTTCTGTCCAATCTTAGGCTGGGAATGAACTCCATATGCTTCGACTGGGAATG-AACTCC
1 CCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-GGAATGAAACTCC
* * * *
16783899 GTATGCTTAAGTCAACCA-AC-GAAACGAGCGTGCGG-GTGCTCAGCCGGCCAGAGGGGCGGGAT
65 ATATGCCTAAGTCAACCACACGGAAACGAGCGTGCGGCGTGAT-AGCCGG-CACAGGGGCGGGAT
* *
16783961 GCGCAAGCCGGTGATCGGTCGGGTCCCCCCT-TACGTGCTACCAATCCTGCCATCGCAAC
128 GCGCAAGCCGG-GATCGGTCGGGTCCCCCCTGT--GTGCTACCAATCCTGCCACCCCAAC
* * *
16784020 CCTCAGTCCGGTCTAATCTTAGACTAGGAATGAACTCCGTATGC
1 CCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGC
16784064 CTATGCCAAT
Statistics
Matches: 191, Mismatches: 32, Indels: 12
0.81 0.14 0.05
Matches are distributed among these distances:
181 3 0.02
182 6 0.03
183 35 0.18
184 20 0.10
185 121 0.63
186 6 0.03
ACGTcount: A:0.21, C:0.28, G:0.29, T:0.22
Consensus pattern (184 bp):
CCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGAATGAAACTCCA
TATGCCTAAGTCAACCACACGGAAACGAGCGTGCGGCGTGATAGCCGGCACAGGGGCGGGATGCG
CAAGCCGGGATCGGTCGGGTCCCCCCTGTGTGCTACCAATCCTGCCACCCCAAC
Found at i:16785808 original size:26 final size:26
Alignment explanation
Indices: 16785758--16785810 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16785748 CTGGTCTGAT
**
16785758 CTTAGATTAGGAATGAACTTTGTATG
1 CTTAGATTAGGAATGAACTCCGTATG
*
16785784 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTAGGAATGAACTCCGTATG
16785810 C
1 C
16785811 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.13, G:0.25, T:0.34
Consensus pattern (26 bp):
CTTAGATTAGGAATGAACTCCGTATG
Found at i:16787196 original size:26 final size:26
Alignment explanation
Indices: 16787145--16787197 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16787135 CCTGTCCGAT
* * * *
16787145 CTTATACTGGGAATGAGCTTCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16787171 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16787197 C
1 C
16787198 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16787358 original size:26 final size:26
Alignment explanation
Indices: 16787329--16787381 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16787319 CCAGTCTGAT
16787329 CTTAAACTGGGAATGAACTCTGTATG
1 CTTAAACTGGGAATGAACTCTGTATG
*
16787355 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAAACTGGGAATGAACTCTGTATG
16787381 C
1 C
16787382 CTAAGTCAAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCTGTATG
Found at i:16787431 original size:184 final size:185
Alignment explanation
Indices: 16787122--16787564 Score: 568
Period size: 184 Copynumber: 2.4 Consensus size: 185
16787112 CATGTGCTGC
* * *
16787122 CGCAACCCTCGGTCCTGTCCGATCTTATACTGGGAATGAGCT-TCGTATGCTTAGACTGGGAATG
1 CGCAACCCTCGGTCCAGTCCGATCTTAAACTGGGAATGAACTCT-GTATGCTTAGACTGGGAATG
** * * *
16787186 AACTCCATATGCCTAAGTCAACCCGTGAAACAAGCATGCGGGCACTCAGTCGGCCAGAGGGGCAG
65 AACTCTGTATGCCTAAGTCAAACCATGAAACAAGCAAGCGGGCACTCAGTCGGCCAGAGGGGCAG
* * * *
16787251 AATGCATAAGCCAAGGATCGGTCGGAT-CCCCACTGCTTGTTGTCGATCCTTCTA-T
130 AATGCACAAGCCAAGGATCGGTCGGATCCCCCACTGCGTGCTGTCGATCCTAC-AGT
** *
16787306 CGCAACCCTCAATCCAGTCTGATCTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
1 CGCAACCCTCGGTCCAGTCCGATCTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
* ** *
16787371 ACTCTGTATGCCTAAGTCAAACCATGAAACGAGCAAGCGGGCGTTCAGTCGGCCAGAGGGGCAGG
66 ACTCTGTATGCCTAAGTCAAACCATGAAACAAGCAAGCGGGCACTCAGTCGGCCAGAGGGGCAGA
* ** * * *
16787436 ATGCGCAAGCCGGGGATCGGTTGGGTCCCCCTCTGCGTGCTGTCGATCCTACAGT
131 ATGCACAAGCCAAGGATCGGTCGGATCCCCCACTGCGTGCTGTCGATCCTACAGT
* ** ** *
16787491 CGTAACCCTCGGTTTAAACCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
1 CGCAACCCTCGGTCCAGTCCGATCTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
16787556 ACTCTGTAT
66 ACTCTGTAT
16787565 TCTTAGACTG
Statistics
Matches: 222, Mismatches: 34, Indels: 5
0.85 0.13 0.02
Matches are distributed among these distances:
184 134 0.60
185 88 0.40
ACGTcount: A:0.24, C:0.26, G:0.26, T:0.24
Consensus pattern (185 bp):
CGCAACCCTCGGTCCAGTCCGATCTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
ACTCTGTATGCCTAAGTCAAACCATGAAACAAGCAAGCGGGCACTCAGTCGGCCAGAGGGGCAGA
ATGCACAAGCCAAGGATCGGTCGGATCCCCCACTGCGTGCTGTCGATCCTACAGT
Found at i:16787550 original size:26 final size:26
Alignment explanation
Indices: 16787514--16787592 Score: 133
Period size: 26 Copynumber: 3.0 Consensus size: 26
16787504 TTAAACCGAT
16787514 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
*
16787540 CTTAGACTGGGAATGAACTCTGTATT
1 CTTAGACTGGGAATGAACTCTGTATG
16787566 CTTAGACTGGGAATGAACT-TCGTATG
1 CTTAGACTGGGAATGAACTCT-GTATG
16787592 C
1 C
16787593 CTAAGTCAAC
Statistics
Matches: 50, Mismatches: 2, Indels: 2
0.93 0.04 0.04
Matches are distributed among these distances:
25 1 0.02
26 49 0.98
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16787712 original size:211 final size:211
Alignment explanation
Indices: 16787329--16787750 Score: 578
Period size: 211 Copynumber: 2.0 Consensus size: 211
16787319 CCAGTCTGAT
16787329 CTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAAACC
1 CTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAAACC
* * * * * * *
16787394 ATGAAACGAGCAAGCGGGCGTTCAGTCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTTG
66 ATAAAACGAGCAAGCGGACGTTCAGCCGACCAGAGGGGCAAGATGCGCAAGCCGGGGATCAGTCG
* * *
16787459 GGTCCCCCTCTGCGTGCTGTCGATCCTACAGTCGTAACCCTCGGTTTAAACCGATCTTAGACTGG
131 GGTCCCCCTCTGCGTGCTGTCGATCCTACAGCCGCAACCCTCGGTCTAAACCGATCTTAGACTGG
16787524 GAATGAACTCTGTATG
196 GAATGAACTCTGTATG
* * *
16787540 CTTAGACTGGGAATGAACTCTGTATTCTTAGACTGGGAATGAACT-TCGTATGCCTAAGTCAACC
1 CTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCT-GTATGCCTAAGTCAAAC
* * *
16787604 CATAAAATGAGCGTA-CGGACGTTCAGCCGACCAGAGGGGCAAGATGCGCAAGCTGGGGATCAGT
65 CATAAAACGAGC-AAGCGGACGTTCAGCCGACCAGAGGGGCAAGATGCGCAAGCCGGGGATCAGT
* * * * * * *** *
16787668 CGGGTCCCCCTCTTCGTGCTGTTGATCTTGCTGCCGCCACCCTCGGTCTGGTCTGATCTTAGACT
129 CGGGTCCCCCTCTGCGTGCTGTCGATCCTACAGCCGCAACCCTCGGTCTAAACCGATCTTAGACT
16787733 GGGAATGAACTCTGTATG
194 GGGAATGAACTCTGTATG
16787751 TCTAAGCCAA
Statistics
Matches: 183, Mismatches: 26, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
210 1 0.01
211 181 0.99
212 1 0.01
ACGTcount: A:0.23, C:0.24, G:0.28, T:0.24
Consensus pattern (211 bp):
CTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAAACC
ATAAAACGAGCAAGCGGACGTTCAGCCGACCAGAGGGGCAAGATGCGCAAGCCGGGGATCAGTCG
GGTCCCCCTCTGCGTGCTGTCGATCCTACAGCCGCAACCCTCGGTCTAAACCGATCTTAGACTGG
GAATGAACTCTGTATG
Found at i:16788478 original size:26 final size:26
Alignment explanation
Indices: 16788428--16788480 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16788418 CCAGTCTGAT
**
16788428 CTTAAACTGGGAATGAACTTTGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
*
16788454 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
16788480 C
1 C
16788481 CTAAGTGAAA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:16788639 original size:185 final size:183
Alignment explanation
Indices: 16788314--16788658 Score: 438
Period size: 185 Copynumber: 1.9 Consensus size: 183
16788304 TCGAAACCCC
** *
16788314 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGCGGAATGCGTAAGCCGAGGATCGGTCGGATCC
1 AACGAGCAAGCGGGCGCTCAGCCGGCCAGAGGGCGGAATGCGCAAGCCGAGGATCGGTCGGATCC
* * ** * * * * * *
16788379 CCACTGCTTGTTGTCGATCCTTCTGTCGCAACCTTCAATCCAGTCTGATCTTAAACTGGGAATGA
66 CCACTGCGTGCTACCGATCCTACAGTCGCAACCCTCAATCCAGACCGATCTTAAACTAGGAATGA
*
16788444 ACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAAACCATGA
131 ACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAAACCATGA
* * * * * *
16788497 AACGAGCAAGCGGGTGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTTGGGTC
1 AACGAGCAAGCGGGCGCTCAGCCGGCCAGA-GGGCGGAATGCGCAAGCCGAGGATCGGTCGGATC
* * * ** *
16788562 ACCCTCTGCGTGCTACCGATCCTACAGTCGTAACCCTCAGTTTAGACCGATCTTAGACTAGGAAT
65 -CCCACTGCGTGCTACCGATCCTACAGTCGCAACCCTCAATCCAGACCGATCTTAAACTAGGAAT
16788627 GAACTCTGTATGCTTAGACTGGGAATGAACTC
129 GAACTCTGTATGCTTAGACTGGGAATGAACTC
16788659 GATATGCTTA
Statistics
Matches: 134, Mismatches: 26, Indels: 2
0.83 0.16 0.01
Matches are distributed among these distances:
183 26 0.19
184 29 0.22
185 79 0.59
ACGTcount: A:0.23, C:0.25, G:0.29, T:0.22
Consensus pattern (183 bp):
AACGAGCAAGCGGGCGCTCAGCCGGCCAGAGGGCGGAATGCGCAAGCCGAGGATCGGTCGGATCC
CCACTGCGTGCTACCGATCCTACAGTCGCAACCCTCAATCCAGACCGATCTTAAACTAGGAATGA
ACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAAACCATGA
Found at i:16788651 original size:26 final size:25
Alignment explanation
Indices: 16788613--16788691 Score: 113
Period size: 26 Copynumber: 3.0 Consensus size: 25
16788603 TTAGACCGAT
*
16788613 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTC-GTATG
16788639 CTTAGACTGGGAATGAACTCGATATG
1 CTTAGACTGGGAATGAACTCG-TATG
*
16788665 CTTAGACCGGGAATGAACTCGGTATG
1 CTTAGACTGGGAATGAACTC-GTATG
16788691 C
1 C
16788692 CTAAGTCAAC
Statistics
Matches: 49, Mismatches: 2, Indels: 4
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.02
26 47 0.96
27 1 0.02
ACGTcount: A:0.29, C:0.18, G:0.27, T:0.27
Consensus pattern (25 bp):
CTTAGACTGGGAATGAACTCGTATG
Found at i:16788810 original size:211 final size:211
Alignment explanation
Indices: 16788428--16788810 Score: 538
Period size: 211 Copynumber: 1.8 Consensus size: 211
16788418 CCAGTCTGAT
* * *
16788428 CTTAAACTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAAACC
1 CTTAAACTGGGAATGAACTTCGTATGCTTAGACCGGGAATGAACTCCGTATGCCTAAGTCAAACC
* ** *
16788493 ATGAAACGAGCAAGCGGGTGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTTG
66 ATGAAACGAGCAAGCCGACGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
* *
16788558 GGTCACCCTCTGCGTGCTACCGATCCTACAGTCGTAACCCTCAGTTTAGACCGATCTTAGACTAG
131 GGTCACCCTCTGCGTGCTACCGATCCTACAGCCGCAACCCTCAGTTTAGACCGATCTTAGACTAG
16788623 GAATGAACTCTGTATG
196 GAATGAACTCTGTATG
* * *
16788639 CTTAGACTGGGAATGAAC-TCGATATGCTTAGACCGGGAATGAACTCGGTATGCCTAAGTCAACC
1 CTTAAACTGGGAATGAACTTCG-TATGCTTAGACCGGGAATGAACTCCGTATGCCTAAGTCAAAC
* ** *
16788703 CATGAAATGAGCGTGCCGACGCTCAG-CTGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGT
65 CATGAAACGAGCAAGCCGACGCTCAGTC-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGT
* * * *
16788767 CGGGTC-CCGCTCTGCGTGCTGCCGGTCCTGCTGCCGCAACCCTC
129 CGGGTCACC-CTCTGCGTGCTACCGATCCTACAGCCGCAACCCTC
16788811 GATCCAATCT
Statistics
Matches: 149, Mismatches: 20, Indels: 6
0.85 0.11 0.03
Matches are distributed among these distances:
210 5 0.03
211 144 0.97
ACGTcount: A:0.23, C:0.26, G:0.31, T:0.21
Consensus pattern (211 bp):
CTTAAACTGGGAATGAACTTCGTATGCTTAGACCGGGAATGAACTCCGTATGCCTAAGTCAAACC
ATGAAACGAGCAAGCCGACGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
GGTCACCCTCTGCGTGCTACCGATCCTACAGCCGCAACCCTCAGTTTAGACCGATCTTAGACTAG
GAATGAACTCTGTATG
Found at i:16790276 original size:26 final size:26
Alignment explanation
Indices: 16790240--16790292 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16790230 CTGGTCTGAT
* *
16790240 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16790266 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16790292 C
1 C
16790293 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16792285 original size:26 final size:26
Alignment explanation
Indices: 16792249--16792301 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16792239 GTTGACTTAG
*
16792249 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16792275 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16792301 G
1 G
16792302 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16794615 original size:902 final size:903
Alignment explanation
Indices: 16792866--16794785 Score: 2874
Period size: 902 Copynumber: 2.1 Consensus size: 903
16792856 TGGGTTGACT
* * *
16792866 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCAAGGGTTGCGGCAGCACATACT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGCGACAGCACATGCT
* * *
16792931 GGGCTCAGGG-ATGTGCTGGTGCCACAGTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCGCCG
66 GGGCTC-GGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCG
* **
16792995 GAGAACCTGACCGGCGGCATTGGGGTTCCGGTGATCAGGGGGGCCAGGGGGTGTGCGCACATGAT
130 GAGAACCTGACCGGCAGCATTGGGGTTCCGACGATCAGGGGGGCCAGGGGGTGTGCGCACATGAT
* *
16793060 GTGGGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGATAACT
195 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
*
16793125 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTAA
260 CACACCCCCTTAAAGAGCATTTGAGATTTAACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTAA
* *
16793190 AAAGGGGACACTTTTTTCAAATGGTGACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
325 AAAGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
*
16793255 TTTTGCATGCCAACAAAAATACAAGCATCACGTCTACCAAGTTTGGGGACAAAACTCCTTCCGAA
390 TTGTGCATGCCAACAAAAATACAAGCATCACGTCTACCAAGTTTGGGGACAAAACTCCTTCCGAA
* **
16793320 AAAATTTTAAAAAATCTTGAACCGGAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCAT
455 AAAATTTTAAAAAATCCTGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCAT
* * * * *
16793385 CTTGCCATGAACCTTCACGTGAAGGCTTAGGGGACCATTCTGTGAATTTACAAGCCATAAAAGTG
520 CTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATG
* *
16793450 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
585 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTT
*
16793515 GCGCATCTCGTCTCTCTGGCCAGCATAGTGCCCGCCCGCCCGCCCGCCCACTAGTTTCGTCGATT
650 GCGCATCTCGTCTCTCTGACCAGCATAGTGCCCGCCCGCCCGCCCGCCCACTAGTTTCGTCGATT
* ** *
16793580 GGCTTAGGCAAACGGAGTTCATTCCTAGTATAAGATCAGACCGGATCGAGGGTAGCAGCAGCAAG
715 GGCTTAGGCAAACGGAGTTCATTCCCAGTATAAGATCAGACCAAACCGAGGGTAGCAGCAGCAAG
*
16793645 ATCGACAGCACACAGAGGGAGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
780 ATCGACAGCACACAGAGGGAGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* **
16793710 TGAGCACCCTCATGCTCGTTTCGTGGGTTGACTTAGGCAAACAAAGTTCATTC-CTAGTC
845 TGAGCACCCGCACACTCGTTTCGTGGGTTGACTTAGGCAAACAAAGTTCATTCTC-AGTC
* * * * * * *
16793769 TAAGCATACGGAGTTGATTCCCACTCAAAGATCTGACCGGACCGAGGGTTGTGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGCGACAGCACATGCT
* *
16793834 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTC-GAGCATCACCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGG
16793898 AGAACCTGACCGGCAGCATTGGGGTTCCGACGATC-GGGGGGCCGAAGGGGGGTGTGCGCACATG
131 AGAACCTGACCGGCAGCATTGGGGTTCCGACGATCAGGGGGGCC--A-GGGGGTGTGCGCACATG
* *
16793962 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAAACCTTGAGAA
193 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
*
16794027 CTCACACCCCCTTAAAGAGCATTTGAGATTTAACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
258 CTCACACCCCCTTAAAGAGCATTTGAGATTTAACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCT
* * *
16794092 GAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAG-TTTTAGCTGAATTT
323 AAAAAGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * * * ** *
16794156 TTTTGTGCATGCCAACAAAAATGCAAGGATCATGTCTATC-AGTTTTTTGGCCAAAACTCCTTCC
388 TTTTGTGCATGCCAACAAAAATACAAGCATCACGTCTACCAAG-TTTGGGGACAAAACTCCTTCC
*
16794220 G-AAAAATTTTAAAAAATCCTGAACCACAAAATGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
452 GAAAAAATTTTAAAAAATCCTGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
* * *
16794284 CGTCTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACGATTGTATGAATTTACAAGCCATAAAA
517 CATCTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAA
* * * *
16794349 ATGGCATTGGCACGTAGAACTATGAAGATGTGCCTACACCCACCTACCACCCTATTGATCCACGA
582 ATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGA
* * * * * *
16794414 CTTGCTCATC-CTGTCTCTCCT-ACCGGCGTAGTGCCCGTCCGCCCGCCCGCCCGCTCGTTTCGT
647 CTTGCGCATCTC-GTCTCT-CTGACCAGCATAGTGCCCGCCCGCCCGCCCGCCCACTAGTTTCGT
* * *
16794477 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTA-C-GA
710 CGATTGGCTTAGGCAAACGGAGTTCATTCCCAGTATAAGATCAGACCAAACCGAGGG-TAGCAG-
* * * * * *
16794540 CAGCAGGATTGGCAGCACGCAGAGGGGGACTCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
773 CAGCAAGATCGACAGCACACAGAGGGAGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * * *
16794605 GGCTGGCTGAGTACCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTCAGT
838 GGCCGGCTGAGCACCCGCACACTCGTTTCGTGGGTTGACTTAGGCAAACAAAGTTCATTCTCAGT
16794670 C
903 C
* *
16794671 TAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGCAACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGCGACAGCACATGCT
* * *
16794736 GGGCTCGAGCATGTG-TTGTGCCGCATTTTTCTTCGTCGGGGCACTATCGC
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGC
16794786 TGGAGCACAT
Statistics
Matches: 910, Mismatches: 97, Indels: 22
0.88 0.09 0.02
Matches are distributed among these distances:
901 41 0.05
902 510 0.56
903 173 0.19
904 186 0.20
ACGTcount: A:0.25, C:0.26, G:0.24, T:0.24
Consensus pattern (903 bp):
TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGCGACAGCACATGCT
GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGG
AGAACCTGACCGGCAGCATTGGGGTTCCGACGATCAGGGGGGCCAGGGGGTGTGCGCACATGATG
TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
ACACCCCCTTAAAGAGCATTTGAGATTTAACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTAAA
AAGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
TGTGCATGCCAACAAAAATACAAGCATCACGTCTACCAAGTTTGGGGACAAAACTCCTTCCGAAA
AAATTTTAAAAAATCCTGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATC
TCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATGG
CATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTG
CGCATCTCGTCTCTCTGACCAGCATAGTGCCCGCCCGCCCGCCCGCCCACTAGTTTCGTCGATTG
GCTTAGGCAAACGGAGTTCATTCCCAGTATAAGATCAGACCAAACCGAGGGTAGCAGCAGCAAGA
TCGACAGCACACAGAGGGAGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
GAGCACCCGCACACTCGTTTCGTGGGTTGACTTAGGCAAACAAAGTTCATTCTCAGTC
Found at i:16794684 original size:26 final size:26
Alignment explanation
Indices: 16794648--16794700 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16794638 GTTGACTTAG
*
16794648 GCATACAGAGTTCATTCTCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16794674 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16794700 G
1 G
16794701 ATCGGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16795479 original size:26 final size:26
Alignment explanation
Indices: 16795443--16795493 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16795433 TGACTTAGGC
*
16795443 ATACGGAGTTCAATCCCAGTCTAAGG
1 ATACAGAGTTCAATCCCAGTCTAAGG
*
16795469 ATACAGAGTTCATTCCCAGTCTAAG
1 ATACAGAGTTCAATCCCAGTCTAAG
16795494 ATTGGACTGG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.24, G:0.20, T:0.25
Consensus pattern (26 bp):
ATACAGAGTTCAATCCCAGTCTAAGG
Found at i:16796384 original size:26 final size:26
Alignment explanation
Indices: 16796344--16796396 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16796334 GTTGACTTAG
*
16796344 GCATACGAAGATCATTCCCAGTCTAA
1 GCATACGAAGATCATTCCCAATCTAA
* *
16796370 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGAAGATCATTCCCAATCTAA
16796396 G
1 G
16796397 ATCGGACTAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.26, G:0.17, T:0.25
Consensus pattern (26 bp):
GCATACGAAGATCATTCCCAATCTAA
Found at i:16796749 original size:901 final size:899
Alignment explanation
Indices: 16794873--16797231 Score: 3357
Period size: 901 Copynumber: 2.6 Consensus size: 899
16794863 TCACACCCCC
*
16794873 TTAAAGTGTCTGAAATGGGGACAC-TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
1 TTAAAGTGTCTGAAATGGGGACACTTTTTTTCAAATCGTCACAAAATCTTGTACACTTCGAGTTT
16794937 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACAAAGTTTGGGGCCA
66 TTAGCTGAATTTTTTTGTGCATGCC-ACAAAAATACAAGGATCACGTCTACAAAGTTTGGGGCCA
* **
16795002 AAACTCCTTCCGAAAAAATTTTAAAAACTCCTGAACCGCAAAAAGTTTC-AAATAGTGAAAAATA
130 AAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAATAGTGAAAAATA
*
16795066 GAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
195 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
16795131 AGCCATAAAAATGGCATTGGCATAGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
260 AGCCATAAAAATGGCATTGGCATA-CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* *
16795196 TCGATCCACGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTACCCGCCTGTT
324 TCGATCCACGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG----CCCGCCCGCT
* * * *
16795261 CATTTCGTCGGTTGGCTTCGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAAACTGAGGG
385 CATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGAACCGAGGG
** * * * * *
16795326 TTATGGTAGCAAGATCAGCAGCACACAGAGGGGGACCCGATCGATCCCCTGGATTGCGCATCCCA
450 TTGCGGCAGCAGGATCGGCAGCACACAGAGGGGGACCCGATCGATCCCC-GGCTTGCGCATCCCG
* * * *
16795391 CCCCTTTGGCTGACTGAGCACCCGCACGCTAATTTCGTGGGTTGACTTAGGCATACGGAGTTCAA
514 CCCCTCTGGC-GACTGAGCGCCCGCACGCTAATTTCGTGGGTTGACTTAGGCATACGAAGATCAA
* * * * * *
16795456 TCCCAGTCTAAGGATACAGAGTTCATTCCCAGTCTAAGATTGGACTGGATCGAGAGTTGCGGCAG
578 TCCCAGTCTAAGCATACAGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGAGTTGCGACAG
* * * *
16795521 CACATTCTGGGCTTAGGCATGTGTTGGTGCCATATTTTTCTTCACCGAGGCACCATCGTCAGAGC
643 CACATGCTGGGCTTAGGCATGTGCTGGTGCCACATTTTTCTTCACCGAGGCACCATCGCCAGAGC
* * * *
16795586 ATCGTCGGAGAACCTAACCGACGGCATTGGGGTTCCAATGATCGGGGGGGCCGGGTGGGGGTGTT
708 ATCGCCGGAGAACCTAACCGACGACATTGGGGTTCCAATGATCAGGGGGGCCGGGTGGGGGTGTG
* * *
16795651 TGCACCTGATCTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
773 CGCACATGATCTGCGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTCATCAAAC
16795716 CTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
838 CTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
16795778 TTAAAGTCTCTGAAATGGGGACACTTTTTTT-AAATGCGGCACAAAATCTTGTACACTTCGAGTT
1 TTAAAGTGTCTGAAATGGGGACACTTTTTTTCAAAT-CGTCACAAAATCTTGTACACTTCGAGTT
* * *
16795842 TTTAGCTGAATTTTTTTGTGCATGCCAGCAAAAACACAAGGATCACGTCTACTAAGTTAGGGGCC
65 TTTAGCTGAATTTTTTTGTGCATGCCA-CAAAAATACAAGGATCACGTCTACAAAGTTTGGGGCC
* * *
16795907 AAAACTCCTTCCGAGAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATTGTGAAAAA
129 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTC-AAAATAGTGAAAAA
* * * * *
16795972 TGGAAAACGAGTCGTCTTGCCATGAATCTTCACGTAAAGGCCTAAAGGACCATTGTATGAATTTA
193 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * *
16796037 CAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTGAACCCACCTACCACCCT
258 CAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * *
16796102 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTTGCCGGCGTAGTGCCCACCCGCCCGCCCGCTCG
323 ATCGATCCAC-GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCA
* * * *
16796167 TTTCATCGGTTAGCTTAGGCCTACGGAATTCATTCCCAGTCTAAGATTGGACCGAACCGAGGGTT
387 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGAACCGAGGGTT
** * * ** * *
16796232 GCAACAGCAGGATCGGCATCACACAGAGGGGGACTCGGCCAATCCCCGGCTTGCACATCCCGCCC
452 GCGGCAGCAGGATCGGCAGCACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCC
** *
16796297 CTCTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGATCATTCC
517 CTCTGG-CGACTGAGCGCCCGCACGCTAATTTCGTGGGTTGACTTAGGCATACGAAGATCAATCC
* *
16796362 CAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGGGTTGCGACAGCAC
581 CAGTCTAAGCATACAGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGAGTTGCGACAGCAC
* * *
16796427 ATGCTGGGCTTGGGCATGTGCTGGTGCCGCATTTTTCTT-AGCCGGGGCACCATCGCCAGAGCAT
646 ATGCTGGGCTTAGGCATGTGCTGGTGCCACATTTTTCTTCA-CCGAGGCACCATCGCCAGAGCAT
* ** *
16796491 CGCCGGAGAACCTGACCGACGACATTGGGGTTCCGGTGATCAGGTGGGCC-GG-GGGGGTGTGCG
710 CGCCGGAGAACCTAACCGACGACATTGGGGTTCCAATGATCAGGGGGGCCGGGTGGGGGTGTGCG
*
16796554 CACATGATGTGCGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTCATCAAACCT
775 CACATGATCTGCGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTCATCAAACCT
** * *
16796619 GTAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACTGGTTTGTTGCCAGTAGCCA
840 CAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
16796679 TTAAAGTGTCTGAAATGGGGACACTTTTTTTCAAATTGTCACAAAATCATGTACACTTTGAGTTT
1 TTAAAGTGTCTGAAATGGGGACACTTTTTTTCAAATCGTCACAAAATCTTGTACACTTCGAGTTT
* * *
16796744 TTAGCTGAATTTTTTTTTGCATGCCAAAAAAAGTACAAGGATCACGTCTACCAAGTTTGGGGCCA
66 TTAGCTGAATTTTTTTGTGCATGCCACAAAAA-TACAAGGATCACGTCTACAAAGTTTGGGGCCA
* * *
16796809 AAACTCCTTCTGAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTTGAAAATCA-TGAAAAA
130 AAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAG-TTTCAAAAT-AGTGAAAAA
*
16796873 TAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
193 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
16796938 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGGTGTGCCTAAACCCACCTACCACCCT
258 CAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* *
16797003 ATCGATCCACAGCTTGCGCATCCCGTCTATCTGGTCGGCGTAGTGCTTGCCTGGCCGCCCGCCCG
323 ATCGATCCAC-GCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G--TG-C---CCGCCCGCCCG
* * * ** * *
16797068 CCCGCTCCTTTTGTCGATTGGCTTAGGCATACGGAGTTCA-TCCCTAGTCTAAGATCAGATCGGA
379 CCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC-AGTCTAAGATTGGACCGAA
* * * * ***
16797132 CCAAGGGTTGCGGCAGCAGGATTGGCAGCACGCAGAGGGGAACCCGATCGATCCCTAACTTGCGC
443 CCGAGGGTTGCGGCAGCAGGATCGGCAGCACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGC
* *
16797197 ATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
508 ATCCCGCCCCTCTGG-CGACTGAGCGCCCGCACGC
16797232 ATGCTAGGCT
Statistics
Matches: 1285, Mismatches: 148, Indels: 38
0.87 0.10 0.03
Matches are distributed among these distances:
900 5 0.00
901 446 0.35
902 10 0.01
903 227 0.18
904 102 0.08
905 30 0.02
906 138 0.11
907 47 0.04
908 140 0.11
909 140 0.11
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.25
Consensus pattern (899 bp):
TTAAAGTGTCTGAAATGGGGACACTTTTTTTCAAATCGTCACAAAATCTTGTACACTTCGAGTTT
TTAGCTGAATTTTTTTGTGCATGCCACAAAAATACAAGGATCACGTCTACAAAGTTTGGGGCCAA
AACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAATAGTGAAAAATAG
AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
GCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
GATCCACGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCATTTC
GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGAACCGAGGGTTGCGG
CAGCAGGATCGGCAGCACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCT
GGCGACTGAGCGCCCGCACGCTAATTTCGTGGGTTGACTTAGGCATACGAAGATCAATCCCAGTC
TAAGCATACAGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGAGTTGCGACAGCACATGCT
GGGCTTAGGCATGTGCTGGTGCCACATTTTTCTTCACCGAGGCACCATCGCCAGAGCATCGCCGG
AGAACCTAACCGACGACATTGGGGTTCCAATGATCAGGGGGGCCGGGTGGGGGTGTGCGCACATG
ATCTGCGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAA
CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
Found at i:16801035 original size:904 final size:899
Alignment explanation
Indices: 16797231--16830348 Score: 38354
Period size: 903 Copynumber: 37.0 Consensus size: 899
16797221 CGCCCGCACG
* * *
16797231 CATGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTTGGT-GGGGCACCATCGCCGGAGCA
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC-TTCGTCGGGGCACCATCGTCGGAGCA
* * **
16797295 TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTTCGGCGATTGATGGGGCCGGGGGGTGTGCGCA
65 TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCA
*
16797360 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATGCCTCATCAAACCTCG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* *
16797425 AGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
** *
16797490 GTCTGAAATCAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * *
16797555 ATTTTTTTGAGCATGCCAACAAAAACACAAGGATCACATCTACCAAGTTTGGGGCCAAAA-TGCC
325 ATTTTTTT-TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CC
* * *
16797619 TTCCGAGAAAATTTTAGAAAAT-CCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
* * * * *
16797683 GAGTCGTCTTGCCATGAATCTTCATGTGAGGGCCTAAAGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* * * *
16797748 AAGAATGGCATTGGCAGGAAGAAATATGAAGAAGTGCCTAAACCCACCTACCACCCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * **
16797813 ACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGT-------CCCGCCCGCCCGCTCATTTTAT
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * * **
16797871 CGGTTGGTTTAGGCATACGGAGTTCATTCCCAGTCCAAGATTGGACCGGACCAAGGGTTGTAGCA
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCA
* * * * * ** * * * * **
16797936 GTAGGATTGGCAGTACACAGAGGGGGACCTGGTCGGTCCTCGACTTCCGCATCCCGTTCCTCTGG
712 GCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * *
16798001 CCGGCTGAGCACCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCT
777 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * * *
16798066 AAGCATATC-GAGCTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGGGGTAGCA
842 AAGCATA-CGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * **
16798124 CATGCTGGGCTTGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGTGGCACCATCGTAAGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * ** *
16798189 CGTCGGAGAACTTGACTGGCGGCATTGGGGTTCCGATGAT-TGGGGGGCCGGGGGGGTGTGCGCA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCA
*
16798253 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* * * *
16798318 AGAACTCACTCCCCCTTAAATAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGGCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* *
16798383 GTCTAAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * * *
16798448 ATTTCTTTGTGCATGCCAAAAAAAAAACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAATCCT
325 ATTT-TTTTTGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * *
16798513 TCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAATGTTTCAAAAATCATGAAAAATAGAAAACG
388 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* * * * * *
16798578 AATCGTCTTGCCATTAAAATTCACGTGAAGGCTTAAGGCATCATTGTATGAATTTACAAGCCTTA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
16798643 AAAATGGCATTGGCA--CAGAAAAATATGAAGATGTGCCTAAACCCACCTACC-CTCCTATCGAT
518 AAAATGGCATTGGCATGCAG--AAATATGAAGATGTGCCTAAACCCACCTACCAC-CCTATCGAT
* * * **
16798705 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAATGCCCGGCCGCCCGGCCAACCGCTCGTT
580 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTT
* * ** * *
16798770 TTGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACC-GGCTGAGGGTTGC
643 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGC
* * * * * * * **
16798834 AGTAGCTGAATCGGCAGCATGCAAAGGGGGACCCGACCGATCCCTGGCTTGCGCATCCTACCCCT
708 GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* * *
16798899 TTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGAGGGTTGACTTAGGCATACAGAGTTCATTCCCA
773 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* ** *
16798964 GTCTAAGCATACGGTGCTT-ATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCA
838 GTCTAAGCATACGGAG-TTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
** * * * * *
16799026 CATGCTGGGCTTAGGCATGTGCTGGTGCTGTATTTTTCTCCGCCGGGGCACCATCGCCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
** ** * * * * * *
16799091 CACCAAAGGACCTGACTGACGGCATTAGGGTTCCGGCGATCGGGGGGGCTGGGGGGTGTGCGTAC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
*
16799156 ATGTTGTGCGAT-GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
16799220 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* * * *
16799285 TCTGAAATGAGGAGACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAATTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * * **
16799350 TTTTTTGTGCATGCCAACAAAAATACGAGGATCACGCCTACCAAGTTTGGGAACAAAACTCCTTC
326 TTTTTTTTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
** *
16799415 CGAAAAAATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
390 CGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
*
16799480 TCGTCTTG-CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAAAAA
455 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* *
16799544 AATTGCATTGGCATGCAGAAATATGAAGATGTGCCCAAACCCACCTACCACCCTATCGATCCACG
520 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * *
16799609 ACTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGTCCGCCCGCCTGCCCACTCGTTT
585 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CG--C--CCGCCCGCCCGCCCGCTCGTTT
* * * * * *
16799674 CATCAGTTGGTTTAGGCATACGGAGTTCATTCCCAATCTAAGATCGGACCAAACCGAGGGTTACG
644 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCG
* ** * * * * * * *
16799739 GTAGCAGGATCGATAGCACACAGAAGGGGACCCGATCGATCCTCAGCTTGAGCATCCCGCCCCGC
709 GCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * * *
16799804 TGGCCAGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATATGGAATTCATTCCCAG
774 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* * * ** *
16799869 TCTTAGCATACGAAGTTCATTCCCAGTCTAAGATCGGACTGGAATGAGGGTTGCGGCGGCA
839 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * * *
16799930 CATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTTTT-GTC-ACTTGGGCACCATCGTTGGAGCA
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCA
** * * *
16799993 TCACCGTAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGGGTGTGCA
65 TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GG-GGGGTGTGCG
*
16800058 CACATCATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
128 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
*
16800123 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTACA
193 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* *
16800188 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGATTTTAGCT
258 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
* * *
16800253 GAATGTTTTTTAGCATGCCAAAAAAATACAAGGATCACCTCTACCAAGTTTGGGGCCAAAACCCC
323 GAAT-TTTTTTTGCATGCCAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * * *
16800318 TTCCAAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTTAAAAATAAAAAAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
16800383 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
16800448 AAAAATGGCATTGGCATGCAGAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
517 AAAAATGGCATTGGCATGCAG-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * *
16800513 CACGGCTTGCGCATCCTGTCGCTTTTGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTT
581 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTT
* * * * * * ** * *
16800578 CATCGGTTGGGTTAGGCAAACGGAGTTCATTCCCAGTCTAAGATCAGATCGGATTGATGGTTGCA
644 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCG
* * * * *
16800643 GCAGCAGGATCGGCAGCACGTAGAGTGGGACCCAATCGATCCCCGGCTTGCGTATCCCGCCCCTC
709 GCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * * *
16800708 TGGCCGGCTGAGCGCCCGCACGTTCGTTTCGTGGTTTGACTTAGGCATATGGAGTTTATTCCCAG
774 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* ** *
16800773 TCCAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATTGGACCGAGGGTTGCAGCAGCA
839 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * **
16800834 CATGCTTGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCGTCACCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
** * * * *
16800899 CACCGGAGAACCTGACCGACGGCATTAGGGTTCCGGTGATCGGGGGGGCCGAGGGGGTTTGCGCA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGTGTGCGCA
* * *
16800964 CATGATGTGCAATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCA
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* *
16801029 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAGGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* *
16801094 GTCTTAAATGGGGACACTTTTTGCAAATGGTCACAAAATCTTGTACACTTTC-AGTTTTTAGCTG
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTG
* * ** * *
16801158 AATTTTTTTGTACATGCCTACAAAAATATGAGGATCACGTCTACCAAGTTTCGGGCCAAAAATCC
324 AATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
*** ** *
16801223 TTCCGAAAAAATTTTAAAAAATGTTGAACCGTAAAAAGTTTTGAAAATCGTGAAAATTAGAAAAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
16801288 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
*** * *
16801353 AAAAATGGCATTGGCACATAAAAATATTAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * * *
16801418 ACGGCTTGCGCATCCTGTCTCTCTGGCCAGCCTAGT------GCCCACCCGCCCGTTCGTTTCGT
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGT
* ** * *
16801477 CAGTTGGCTTAGGCATAAC-GAGTTCATTCCCAGTCTAAGATTAGATCAGACCGAGGGTTGTGGC
647 CGGTTGGCTTAGGCAT-ACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGC
* * * * *
16801541 AGCAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCTCATCTCGCCCCTCAG
711 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * *
16801606 GCCGGCTGAGCGCCCGTACGATCGTTTTGTGGGTTGACTTAAGCATATGGAGTTCATTCTCAGTC
776 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
16801671 TAAGCATACGGAGTTCCTTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAACA
841 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * *
16801730 CATGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGAGGAACCATCGTCGAAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * *
16801795 CGCCGGAGAACCTGATCGGCAGCATTGCGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCA
* * *
16801860 CATGATGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATC-AACCTCA
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
16801924 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
16801989 GTCTGAAATGGGGACAC-TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
16802053 ATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTTTACCAAGTTTGGGGCCAAAACTCCT
325 AT-TTTTTTTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * * **
16802118 TTCGAAAAAAATTTAAAAAATCCCAAACTATAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
388 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
16802183 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* *
16802248 AAAATGGCATTGGCATCCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
518 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * ** * *
16802313 CGGCTTGCGCATCTCGTCTCTCTGGCCGGTGTAGTGCCCGCCCGCCTACCCACTCGCTCGTTTCG
583 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTTCG
** * ** * * * *
16802378 TCCATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAATATCAAACTAGACCAATGGTTGCGGT
646 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGC
* * * *
16802443 AGCAGGATCGACAGCACGCAGAGGGGGACCC-AGTCGATCCTCGGGCTTGCGCATTCCGCCCCTC
711 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCC-CCGGCTTGCGCATCCCGCCCCTC
* *
16802507 TGGCCGGCTGAGTGCCCGCACGCTCGTTTTGTGGGTTGAC-T-----TA--G-G--CA-T---A-
774 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* * * *
16802556 -C---G---A---AGTTCATTCCCAGTCTAAGATTGGACCGGATCGAGGGTTGCGACAGTA
839 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* ** * *
16802607 GATGCTGGGCTCGGGCATGTGCTGGTGCCATAATTTTCTTCATCGGGGCACCATCGTCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * * *
16802672 CGTTGGAGAACCTGACCGACGACATTGGGGTTCCGGCGATCGGGTGGGTCGGGGGG-GTTACGCA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTG-TGCGCA
*
16802736 CATGATGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* * *
16802801 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTACCAGTAGCCATTAAAAT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* *
16802866 GTCTAAAATGGGGACA-TTATTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTG
260 GTCTGAAATGGGGACACTT-TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* * * *
16802930 AATTTTTTTTATGCATCCCAACAAAATACAAGGATCATGTCTACTAAGTTTGGGGCCAGAAA-TC
324 AA-TTTTTTT-TGCATGCCAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA-AAACTC
** ** * **
16802994 CTTCCGAAAAAATTTTAAAAAATCTTGAACCACAAAAACTTTTGAAAATCGTGAAAAATAGAAAA
386 CTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
* * *
16803059 CAAGTCGTCTTGCTC-TGAAACTTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTGCAAGCC
451 CGAGTCGTCTTGC-CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* *
16803123 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAATCCACCAACCACCCTATCGAT
515 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * *
16803188 CCACGACTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCACCCACCCGCCTGCTCGTT
580 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-C-GCCCGCCCGCCCGCCCGCTCGTT
* *
16803253 TCGTCGGTTGGATTAGGCATACGGAGTTCATTCCCAGTCTAAGAAT-GGACCAGACTGAGGGTTG
643 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG-ATCGGACCAGACCGAGGGTTG
* ** * * * *
16803317 CGACAGCAGGATCGGCAGCACATAGAAGGAGACCCTG-TCGATCCCCGGCTTGCGCATCCCACCC
707 CGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GACCGATCCCCGGCTTGCGCATCCCGCCC
* * * * *
16803381 TTCTGGCCGGTTGAGCACCCGCACGCTTGTTTCTTGGGTTGACTTAGGCATACGGAGTTCATTCC
771 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * * * *
16803446 CAGTCTAACCATGCGGTGTTCATTCCCAGTCTATGATCGGACCAGACCCAGGGTTACGGCAGCA
836 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* *
16803510 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGAAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * ** * *
16803575 TGCCAGAGAACCTGGCCGATGGCATTGGGGTTCCGACGATC--GGGGGCCGGGAGGGGTGTGCGA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GG-GGGGTGTGCGC
* * * *
16803638 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAGTGGCTCCCTTTCCCTCATCAAACCCC
129 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
* * *
16803703 GAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCAATTAAAG
194 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
*
16803768 TGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
259 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* * ** * *
16803833 AACTTTTTTTGTGCATGCTGAAAAAAATACAAGGATCACGTCTGCCAAGTTTGTTGCTAAAACCC
324 AA-TTTTTTT-TGCATGC-CAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
* * * * * * * *
16803898 CTTTCGAAATAATTTTAAAAAATCTCGAACAG-AAAAAGCTTCGAAAATCCTAAAAAATAGAAAA
386 CTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
*
16803962 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCCA
451 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
*
16804027 TAAAAATGGTATTGGCATGCAGAAATATGAAGATGTAG-CTAAACCCACCTACCACCCTATCGAT
516 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGT-GCCTAAACCCACCTACCACCCTATCGAT
* * * * * **
16804091 CCATGGCTTGCGCATCCCGTCTGTCTAGCCGGCGTAGTGCCTGCTCGCCCGCCTGCTTGCTCGAT
580 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-C-GCCCGCCCGCCCGCCCGCTCG-T
* * * * *
16804156 TTTGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATTGGACCAGACCGACGGTTA
642 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG
* * * * * *
16804221 TGGCAGCAGGATCGGTAGCATGCAGAGGGAGACCCGACCGATCCCTGACTTGCGCATCCCGCCCC
707 CGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
* * * * *
16804286 TCTGGCTGACTGAACGCCCGCGCGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCCC
772 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * * * * * *
16804351 ATTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAGACTGAACTGAGGGTTACGGCAGCA
837 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
** * *
16804414 CATGCTGGGCTCAAGCATTTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * *
16804479 CATCAGAGAACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGTGTGCGCAC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* * * **
16804544 ATGATGTGCAATGGGTTCTGGTACTTGGCCCTTATATTGGTCCCCTATTTCTCATCAAACCTCGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
16804609 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* *
16804674 TCTGAAATGGAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* *
16804739 TTTTTTTGTTCATGCCAACAAAAATAGAAGGATCACGTCTACCAAGTTTGGGG-CAAAACTCCTT
326 TTTTTTT-TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * * *
16804803 TCGAAAAAGTTTTAAAAAATCCCGAACTGAAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
389 CCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
* *
16804868 GTCGTCTCGCCATGAAACTTCACGTGAAGGCTTAATGGACCATTGTATGAATTTACAAGCCATAA
454 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* * * *
16804933 AAATGGCATTGGCACGTAAAAATATGAGGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
519 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * ** * ** *
16804998 GGCATGCGCATCCCGTTTCTCTGGCCGATGC-T-GT--GCTTGCCCGCCCACCCTTTC-ATTCTG
584 GGCTTGCGCATCCCGTCTCTCTGGCCG--GCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTC-G
* * * *
16805058 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACCGACGGTTGC-GT
646 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGC
** * * * ** * * * *
16805122 AGTGGGATCAGCAGTACGCAAAGGGGGACCCGGGCGATCCCCGACTTGTGCATCCTGCCCTTCTG
711 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * *
16805187 GCCGGTTGAGCGCTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTGA-T-----TC
776 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * *
16805246 ----C---C---G--------C--TCTAAGATCGGACTGGACCGAGGGTTACGACAACA
841 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * * *
16805285 CATGCTAGGATCGGGCATTTGCTGGTGCCACATTTTTCTTCGTTGGGGCACCATCGTCAGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
** * * * * *
16805350 CACCGGAGAACCTAACCGGCGGCATTAGGGTTCCGGCGATCGGGGGGGTCGGGGGGGTGTACGGA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGG-CCGGGGGGTGTGCGCA
* * *
16805415 CATGATGTGCGATGGGTGCTGATACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACCTGG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
*
16805480 AGAACTCACACTCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * *
16805545 GTCTGAAATGGGGACACTTTTTTCAAATGGTTACAAAATCTTATACACTTCGAGTTTTTTGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
16805610 ATTTTTTTTTGCATGCCAAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAATTCC
325 A-TTTTTTTTGCATGCC--AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * *
16805675 TTCCGAAAAAATTTTAAAAAATCCCAAACCG-AAAAAGTTTCAAAAATCCTGAAATATAGAAAAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
* * *
16805739 GAGTCATCTTGCCATGAAACTTCACATGAAGGCATAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* * *
16805804 AAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCAACTACCACTCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * *
16805869 ACGGCTTGCGCATCCCATCTCTCTGGCCGACGTAGTGCCCGCCCG-CCGCCCACCCGCTCGTTTC
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTTC
* * * ** *
16805933 GTCGGTTGGCTTAGGTATACAGAGTTCATTCCTAGTCTAAGATTTGACCAGACTGAGGGTTGCGG
645 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGG
* * * * ** * * *
16805998 TAGCAGGATTGGCAGCACGCACAAGGGGACCCGGTCGATCCCTGGCTTGCGCAACCTGCCCCTCT
710 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * *
16806063 GGTCGGCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGT
775 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* ** ****
16806128 CTAAGCAAACGGAGTTCATTCCCAGTCTAAGATCGGATAGGACCGAGGGTTATAACAGCA
840 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * * *
16806188 CATTCTGGGCTCGGGCAGGTGCTGGTGCCGTATTTTTCTTCGCCGGCGCACCATCGCCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * *
16806253 CGCCGGAGAACGTGACCGGCGGCATTGTGGTTCTGGAGATCGGGGGGGGCCGGGGGGTGTGCGCA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGGCCGGGGGGTGTGCGCA
* *
16806318 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATCGGCCCCCTATCCCTCATCAAACCTTG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
16806383 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* *
16806448 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCAAGTTTTTTA-CTG
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG-TTTTTAGCTG
*
16806512 AATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACC-AAACTCC
324 AATTTTTTT-TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* *
16806576 TTCCGAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCGAGAAAAATAGAAAAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
16806641 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
16806706 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * *
16806771 ACGGCTTGCGGATCCCGCCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTCCGCTTG
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCG--C--CCGCTCG
* * * *
16806836 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGATCGGACTGAGGGTT
641 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * * ** * *
16806901 GCGGCAGCAGGATTGGCAGCATGCAGAGAGGGACCCGGTCGATCCCCAGCTTGCGCATCCTGCCC
706 GCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
*
16806966 CTCTGGCCGGCTAAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
771 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * ***
16807031 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCCGACAGGACCGAGGGTTATAGCAGCA
836 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * * * **
16807095 CATTCTGGGCTTGGGCAGGTGCTGGTGCCGCATTTTTCTTCGCCAGCGCACCATCACCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * ** * * * *
16807160 CGCCGGAGAACGTGATAGGCGGCATTGTGGTTCTGGAGATCGGGGGGGCCAGGGGGTGTGCGCAC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* * * * *
16807225 ATGATGTGTGATGGGTGCTGGTACTT-GCCATTATATCGACCCCCTATCCCTCATCAAACCTTGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
*
16807289 GAACTCACAGCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* *
16807354 TCTAAAATGGGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * * *
16807419 TTTTTTTGTGTATGCCAACAAAAATACAAGGATCACGTCCACCAAGTTTGGGG-CAAAAATCCTA
326 TTTTTTT-TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * * * ** * *
16807483 CCAAAAAAATTTTGAAAAATCCTGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGG
389 CCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
* ** *
16807548 GTCGTCTTGCCAAGAAACTTCACAAGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCACAA
454 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* *
16807613 AAATGGCATTGGCACGCAGAAATATGAAGATGTCCCTAAACCCACCTA-CACCCTATCGATCCAC
519 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * ***
16807677 GGCTTGCACATCCCATCTCTCTGGCCGACGTAGTGCCCGCCAGCCCGCCCGCTTTCTCGTTTCGT
584 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * ** * *
16807742 CAGTTGGCTTAGGCATACAGAGTTCATTCCTAGTCTAAGATCTGACTGGATCGAGGGTTGTGGCA
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCA
* * * *
16807807 GCAGGTTCGGCAGCACGCAAAGGGGGA-CCTAGCCGAT-CCCGGCTTGCGCATCCCACCCCTCTG
712 GCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* *
16807870 GCCGGCTGAGCGCCCGCACGCTCGTTTGGTGGGTTGACTTAGGCATATGGAGTTCATTCCCAGTC
776 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * * *
16807935 TAAGCATACGAAGTGCATTCTCC-GTGTAAGATCGGACCAGACTGAGGTTTGCGGCAGCA
841 TAAGCATACGGAGTTCATTC-CCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * **
16807994 CATGCT-GGCTCGGGCATGTGCTGGTGCAGCATTTTTCTTCATTAGGG---CA----C----CAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * * *
16808047 CGTCGGAGAACCTGACTGGCGGCATTTGGGTTCCAGCGATCGGGGCGGTCGGGGGGGTGTGCGCC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGG-GGGCCGGGGGGTGTGCGCA
* * * *
16808112 CATGATGTGTGATGGGTGCTAGTACTTGGCCCTTATATTTGCCCCCTATCCCTCATCAAACCTTG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
*
16808177 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* *
16808242 GTCTGAAATGAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAGTTTTTAGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
*
16808307 ATATTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
325 AT-TTTTTTTGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * * * *
16808372 ACCGGAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAATG
388 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* * * *
16808437 GGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCAATA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* * *
16808502 AAAATGGCATTGGGATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTGTCGATCCA
518 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
*** * * * *
16808567 TAACTTGCGCATCCCGTCGCTCTGGCTGGCATAGT------GCCCGCCCGCCCGCTCGTTTTGTC
583 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGTC
* ** * * *
16808626 GGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCAAATCAGACCGAGGGTTGTGGCAA
648 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAG
* * * * *
16808691 TAGGATCGGCAGCACGCAGAGGGGGACTCGACCAATCCCCTGCTTGCGCATCCCGCCTCTCTGGC
713 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
** * * * *
16808756 CGTTTTAGCGCCCTCACGATCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTTTA
778 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * *
16808821 AGCATATGGAGTTCATTCCCAGTCTAAGATTGGACCGGACCGATGGTTGCGGCAGCA
843 AGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* *
16808878 CATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * * *
16808943 CATCGGAGAACCTGATCGACGGCATTGGGGTTTCGGCGATCGAGGGGGCCGAGGGGGGTGTACGC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--GGGGGGTGTGCGC
* *
16809008 ACATGATGTGC-ATTGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATAAAACCT
129 ACATGATGTGCGA-TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
*
16809072 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAA
193 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* * * *
16809137 GTGTCTGAAATGGGGACACATTTTTCAAATCGTCACAAAATCTTGTACACTTCGATTTTTTAGTT
258 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
**
16809202 GAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTAAAAAGTTTGGGGCCAAAACTC
323 GAATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
* * * **
16809267 CTTCCGAAAGAATTTTAAAAAATCCTGAACC-CAAAAAGTTTTGAAAATCGTGAAAAATAGAAAA
386 CTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
*
16809331 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCA
451 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* *
16809396 TAAAAATGGCATTGGCATGCAGAAATATCAAGATGTGCCTAAACCCACCTACCATCCTATCGATC
516 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * *
16809461 CACGGCTTGCGCATCCTGTCTCTCTGGCCGGCGTA-T-TGCTCGCCCGCTCGCCCGCTCGTTTCG
581 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCG
* * ** *
16809524 TCGGTTAGCTTAGGCATATGGACATCATTCCCAGTATAAGATCGGACCAGACCGAGGGTTGCAGG
646 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGC-GG
* * * * * * *
16809589 -AGAAGGATCGG-AGCACACAGA---GGTCCCGGCCGATCCCCGACTTACGTATCCCGCCCCTCT
710 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * * * * * *
16809649 GGCTGGCTAAGCACCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCTCAAT
775 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * * *
16809714 CTAAGCATATGGAGTTCAATCCGAGTCTAAGATCGGACCGCACCGAGGGTTGTGGCAACA
840 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * *
16809774 CAT-TTGGGCTCGGGCATGTGCTGGTACCGCATTTTTCTTCGCCAGCGCACCATCGTCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * * * * *
16809838 CGCCAGAGAACGTGACCGGCAGCATTGTGGTTCTGGAGATCGGGGGGGCCGGGGGGTGTGCGCGC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* * * **
16809903 ATCATGTGAGATGGGTGCTGGTACTTGACCCTTATATCAGCCCCCTATCCCTCATCAAACCTCGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
16809968 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* *
16810033 TCTGAAATGGGGATACTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* *
16810098 TTTTTTTGTGCATGCCAAAAAAAATATAAGGATCACGTCTACCAAGTTTGGGGCCAAATCTCCTT
326 TTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * * * *
16810163 CTGAAAAACTTTTAAAAAATCCCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAATGA
389 CCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
* * * *
16810228 GTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAGTTTACAAGCTATAA
454 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* *
16810293 AAATGGCATTGGCATGCAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTTTCGATCCAC
519 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * **
16810358 GGCTTGCGCATCCTGTCTCTCTGGCCGACATAGTGGCCGCCAGCCCGCCCGCTTGCTCGTTTCGT
584 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT-G-CGCCCGCCCGCCCGCCCGCTCGTTTCGT
* * ** * *
16810423 CAGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACTGGATCGAGGGTTGTGGCA
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCA
* * * * *
16810488 GCAGGTTCGGCAGCACGCA-ATGGGGGACCTGGCCGATCCCCCGCTTGCGCATCCCACCCCTCTG
712 GCAGGATCGGCAGCACGCAGA-GGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* *
16810552 GCTGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
776 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * ** *
16810617 TAAGCATACGAAGTTCATTCCCCA-TGTAAGATCAGACCAGACTAAGGTTTGCGGCAGCA
841 TAAGCATACGGAGTTCATT-CCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * *
16810676 CATGCT-AGCTCGGGCATGTGCTGATGCCGCATTTTTCTTCATCAGGGCACCATCGCCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * *
16810740 CG-CTGGAGAACCTGACTGGCGGCATTGGGGTTCCAGCGATCGGGGCGGCCGGGGGGGTTTGGGC
66 CGTC-GGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGC
* *
16810804 -CTATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCT
129 AC-ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
*
16810868 CGAGAACTCACACCCCCTGAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
193 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
16810933 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
258 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
*
16810998 GAATTTTTTTGTGCATGCCAAAAAAATACAAGGATCACGTCTACCAAGTGTGGGGCCAAAAACTC
323 GAATTTTTTT-TGCATGCCAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AAAACTC
* * **
16811063 CTACCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAA
386 CTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
* * * *
16811128 CGGGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAATGGACCATTATATGAATTTACAAGCAA
451 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
*
16811193 TAAAAATGGCATTGGGACAT--AGAAATATCAAGATGTGCCTAAACCCACCTACCACCCTATCGA
516 TAAAAATGGCATT-GG-CATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * *
16811256 TTCACAGCTTGCGCATCCCGTCTCTCTGGCTGGCATAGT--GCCCGCCCGCCCGCCCGCTCGTTT
579 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTT
* ** * * *
16811319 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAAATCAGACTGAGGGTTGTG
644 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCG
* * * * *
16811384 GCAGTAGGATCGACAGCACGTAGAGGGGGACCCGACCAATCCCCGGCTTGCGCATCCCGCCTCTC
709 GCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * * **
16811449 TGGCCGGTTTAGCGCCCGCACGCTCATTTTATGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
774 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* * * * * * *
16811514 TCTAAGATCGATCAGACTGAGGGT--TTCGGCAG-C-AGGATC-GACAGCA-TGCAGAGG--G-G
839 TCTAAG--C-AT---ACGGA-GTTCATTC-CCAGTCTAAGATCGGACCGGACCG-AG-GGTTGCG
*
16811570 G-A-CC
894 GCAGCA
* * ** * * * * ** * * ** * * *
16811574 CGT-CCGATCCCCGGCTTGCGCATCCTGCC-CCTCTAGC--CGGCTGAGCGCCCGCA-CGCTC--
1 CATGCTGGGCTCGGGCATGTGC-TGGTGCCGCATTTTTCTTCGTC-G-GGGCAC-CATCG-TCGG
** * * * * * * *** *** ** ** **
16811632 -GTTTCGTGGGTTG-ACTTAGCATACGGAGTTCATTCCCAG-T-CTAAGATCGGACCGAACCGAT
61 AGCATCGTCGG-AGAACCT-G-A-CCGGCG-GCATT-GGGGTTCCGGCGATCGG-GGGGGCCGGG
* * * * * * * * * **
16811693 GGTTGCGACAGCACAT-ACTG-G-GCTCGG-GCAT-GTGCTGGTGCCGCATTTTTCTTCGTCGGG
119 GGGTGTG-C-GCACATGA-TGTGCGATGGGTGC-TGGTACTTG-GCC-C--TTATATT-GGC-CC
* * * * * * * * *** *** * *
16811753 GC-A-CCATCATCGGAGCATCGTCGGA--GA-ACCTGATCGGAG-GCA-TTGGGGTTTTGGCGAT
174 CCTATCCCTCATC-AAACCTCG-AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT----A-
** * *** * * * * * * *
16811811 CGAGG-GGGCCGGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACT-TGG-CCCTTATA
232 C-AGGTTTG-C---TGCCAGTA-GC-C---AT-T--AAAGTGT-CT-GAAATGGGGACACTT-T-
* ** ** * ** * * * * *
16811873 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCTTAAAGAGCATTTGAGATTTTGC
280 TT----TCAAAT-GGTCA-CAAA-ATCTTG---T-ACA---CTT--CGAG-TTTTTAG---CTGA
** ** ** * * * ** * *
16811938 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA-CAC-TATTTTCAA--AT-GGTCA
325 ATTTTTTTTG-CA-T-GCCAAAAAAAT-AC---AA---GGATCACGT-CTACCAAGTTTGGGGC-
** **
16811998 CAAAATCTTGTACACTT-CGAGTTTTTAGCTGAATGTTTTTATGCATGCCAACAAAAATACAAGG
378 CAAAA-C---T-C-CTTCCGA------A----AA---AATT-T---T----A-AAAAAT-C-CCG
* * * ** * * ***
16812062 ATCACGTCTAAAAAGTTTGGGGCCAAAACTCCTTCCGAAAAATTTTAAAA--AATC-CCGAACCC
413 AAC-CG--TAAAAAGTTT-----CAAAAAT-CGT--GAAAAA-TAGAAAACGAGTCGTC-TTGCC
* * * *** * ** * * * *
16812124 A-AAAAGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCTCGCCATGAAACTTCACTTGAAG
465 ATGAAA-CTTC----A-CGTGAAGGCT--TAAGGGA-CCAT-T-G-TATG-AA-TTTAC---AAG
* * * * ** * * * * * **
16812188 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATCGGCATGCAGAAATATGAAG
513 CCATAA---A--AATG---GCATTGGCATG-CAGAAATAT-G-A--AG-ATG-TG---CCT-AA-
* * * *
16812253 ATGTGCCTAAACCCACCTGCCATCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGC
558 A----CC--CA-CC---TACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGC
* * * *
16812318 GTACT--ACTCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGA-TATCATTCC
613 GTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT-TCATTCC
* * * * * ** * * *
16812380 CAGCCTAAGATCGGATCGGACCGAGGGTTGCAGTAGCAGGATCGATAGCACACAGAGGGCGTCCC
677 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC
* * * * *
16812445 GGCCGATCCCCAGCTTGAGCATCCCGCCCCTCTGGCCGGCTAAGCGCCCGCACGCTCATTTCGTG
742 GACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTG
16812510 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---------A--C-----
807 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA
* *
16812555 T--G--C--ACCGAGGGCTGTGGCAGCA
872 TCGGACCGGACCGAGGGTTGCGGCAGCA
* * ** *
16812577 CATTCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCCCCGGTGCACCATCGTCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * ** * * *
16812642 CGCCAGAGAACGTGACCGGCAACATTGTGGTTCTGG-AAGTCGGGGGGGCCGGGGGGGTGTGCGC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGA-TCGGGGGGGCC-GGGGGGTGTGCGC
* * * * **
16812706 ACATCATATGAGATGGGTGCTGGTACTTGACCCTTATATCAGCCCCCTATCCCTCATCAAACCTC
129 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
16812771 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
194 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
*
16812836 TGTCTGAAATGGGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
259 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
16812901 AATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
324 AATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * * *
16812966 TTCTGGAAAAATTTTAAAAAATCCCGATCCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
*
16813031 GAGTCGTCTTGCCATGAAACAT-ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* **
16813095 AAAAATGGCATTGGCTTGCAGAAATATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * *
16813160 ACGGCTTGCGCATCCTGTTTTTCTGGCCGGCATAGT--GCCCGCCCGCCCGCCCGCTCGTTTCGT
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * *
16813223 CGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGAACCAGACCAAGGGTTGTGGTA
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCA
* * ** *
16813288 GTAGGATCGGTAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGTGCATCCCGCCCCTCTGG
712 GCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * *
16813353 ACGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCT
777 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * * *
16813418 AAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACTGGACCGATGGTTGCGGCAGCA
842 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * *
16813476 CATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTT-TTCGTCAGGCCACCATCGTCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * * * *
16813540 CGTCGGAGAACCTTACCGACGACATTGGGGTT-CGGTGATCGGAGGGGCCGGGGGGGTGTGTGGA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCA
* * *
16813604 CATGATGTGTGATGGGTGCTGGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACCCCG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
** * *
16813669 AGAACTCATGCCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCGGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
*
16813734 GTCTGAAATGGGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
16813799 ATTTTTTTGTACATGCCAAAAAAAAATACAAGGATCACGTCTACCAAGTTTAGGGCCAAAACTCC
325 ATTTTTTT-TGCATGCC--AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
*** ** *
16813864 TT-CGAAAAAAATTTTAAAAAATCCCGAACCACGAAAA-TTTTGAAAATCATGAAAAATAGAAAA
387 TTCCG-AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
* * * *
16813927 CGAGTCATCTCGCCATGAAACTTCACATGATGGCTTAAGGGACCATTGTATGAATTTA-AAGCCA
451 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* * ** *
16813991 TAAAAATGGCATTGGCACAG-AGAAATATGAAGATATGTTTAAACCCACCTACAACCCTATCGAT
516 TAAAAATGGCATTGGCA-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * * *
16814055 CCACGGCTTGCGCATCCCGTCTCTCAGGTCGGCGTAGT--ACCCGCTCGCCCGCCCGCTCCTTTC
580 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTC
* * * *
16814118 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAACATCGGACCAGATCGAGGGTTGCAG
645 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGG
* * * *
16814183 CAGCAAGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCT
710 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
*
16814248 GGCTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCAG-
775 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
*
16814311 -T---C-TA---AG---A-T--C-G-----GATCGGACC-GA---A-GGTTACGGCAGCA
840 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * * *
16814346 CATGCTGGGCTCGAGAATGTGCTGGTGCTGCATTTTTCTTCATCGAGGCGCCATCGTCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * *
16814411 CGGCGAAGAACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCA
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCA
* * *
16814476 CATGATGTGCGATGGGTCCTGGTACTTGGACCTTATATTGGCACCCTATCCCTCATCAAACCTCG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* * *
16814541 AGAACTCACACCCCCTTAAAAAGCATTTTAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * *
16814606 GTTTGAAATGGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
16814671 ATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCCACCAAGTTTGGGGCCAAAACTGCT
325 ATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * *
16814736 TCCGAAAAAATTTTAAAAAATCCTGAACCGAAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATG
388 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* *
16814801 AGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATC
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* * * * * *
16814866 AAAATGGCATTGGAATGAAGAACTATAAAGATGTCCCTAAACCCACCTACCACCTTATCGATCCA
518 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * *
16814931 CTGCTTGCGCATCCCATCTCTCTGGCTGACATA--GCGCTCGCCCGCCCGCCCGCTCGTTTCGTC
583 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGTC
* * * * * * *
16814994 GGATGGCGTAGGCATACGGAATTCATTCCCAGTCTAAGATTGGACCAGACCAAAGGTTGCGGTAG
648 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAG
* * * *
16815059 CAAGATTGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
713 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* *
16815124 CGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCTCAG--T-
778 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
*
16815186 --C-TA---AG---A-T--C-G-----GATCGGACC-GA---A-GGTTACGGCAGCA
843 AGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * **
16815220 CATGCTGGGCTCGAGAATGTGCTGGTGCTGCATTTTTCTTCGTCGACGCACCATCGTCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* **
16815285 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTGTGTTC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--GGGGGGTGTGCGC
* * *
16815350 ACATGATGTGCGATGGGTCCTGGTACTTGGACCTTATATTGGCACCCTATCCCTCATCAAACCTC
129 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
* * *
16815415 AAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTCTGCTGCCAGTAGCCATTAAAG
194 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
* *
16815480 TGTCTGAAATAGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
259 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* * * *
16815545 AATTTTTTTGTGCATGCCAAAAAAAAAACTAGGATCAGGTCAACCAAGTTTGGGGCCAAAACTCC
324 AATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * * ** *
16815610 TT-CGAAAAAAAATTAAAAAAATCCCGAACCATAAAAAGTTTTGAAAATCGTGAAAACTAGAAAA
387 TTCCG-AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
* * * *
16815674 CGAGTCGTCTCGCCATGAAACTTCACATGAAGCCTTAAGGGACCATTGTACGAATTTACAAGCCA
451 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* * ** *
16815739 TAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTATAATCCTATCGATC
516 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * * * * * *
16815804 CATGGCTTGCACATCCCGTCTCTCAGGCCGGCGTAGT--ACCCGTCCGCCCACCTGCTTGTTTCG
581 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCG
* * *
16815867 TCGGTTGGCTTAGGCATACAGAGTTCATT-CCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGT
646 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGC
* * ** * ** * ** *
16815931 AGCAAGATTGATAGCACGCAGAGGGGAACTTGATCGATCCCTAGCTTGTGCATCCCG-CCCTCTG
711 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* *
16815995 GCTGGCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
776 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * ** * *
16816060 TAAGCATACGGAGTTCATTCCCAATCTCAGATCGGACCATACCGAAGGTTACGGCAGCA
841 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * *
16816119 CATGCTGGGCTCGGGAATGTGCTGGTGCTGCATTTTTCTTCATCGAGGCACCATCGTCGAAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCG-GG-------G-C--ACCAT
* * * *
16816184 CGTCGGAGCATCGTCAGAGAACCTGACCGACGGCATTGGGATTCCGACGATC-GGGGGGCCGGGG
55 CGTCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGG
* ** * *
16816248 GGTGTGCGCACATGATGTGTGATGGGCCCTGGTACTTGGACCTTATATTGGCACCCTATCCCTCA
120 GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA
* *
16816313 TCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAG
185 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
16816378 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
250 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
* *
16816443 TTTTGGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCCACCAAGTTTGGGGC
315 TTTTAGCTGAATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* * *
16816508 CAAAACTGCTTCCGAAAAAATTTTAAAAAATCCTGAACCGAAAAAAGTTTCAAAAATCGTGAAAA
378 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
* *
16816573 ATAGAAAATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
443 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* * * * * * *
16816638 ACAAGCCATCAAAATGGCATTGGCACGAAGAACTATAAAGATGTCCCTAAACCCACCTACCACCT
508 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* * * *
16816703 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCTGACATA--GCGCTCGCCCGCCCGCCCGC
573 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGC
* * * *
16816766 TCGTTTCGTCGGATGGCTTAGGCATACGGAATTCATTCCCAGTCTAAGATTGGACCAGACCAAGG
638 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGG
* * * * *
16816831 GTTGCGGTAGCAAGATTGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
703 GTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
*
16816896 CCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
768 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* * * ** * *
16816961 TCCTAGTCTAAGCATACGGAGTTCATTCACAGTTTAAGATCGGACTAGATCGAGGGTTGCGGTAG
833 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAG
16817026 CA
898 CA
* * ** * *
16817028 CATGCTGGGCTCGGGAATGTGCTGGTGCTTGCATTTTTCTTCACCGAGGCACCATCGTCGGATCA
1 CATGCTGGGCTCGGGCATGTGCTGGTGC-CGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCA
** * * *
16817093 TCGTCGGAGAACCTGACCGGTAGCATTGGGGTTCTGACGATCGGGGGGCCCGGAGGGGTGTGCGC
65 TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGG-GGGGTGTGCGC
* * * * * *
16817158 ACTTGATGTGCGATGGGTCCTGGTACGTGGACCTTATATTGGCACCCTATCCCTCATCAAACCTT
129 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
*
16817223 GAGAACTCACACCCCCTTAAAGAGCATTTTAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
194 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
* *
16817288 TGTCTGAAATAGGGACACTATTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
259 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
*
16817353 AATTTTTTTGTGCATGCCACAAAAAATACAAGGATCACGTCAACCAAGTTTGGGGCCAAAACTCC
324 AATTTTTTT-TGCATGCCA-AAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * * * ** * * *
16817418 TTTCAAAAAAATTTAAAAAAATCTCGAACCACAAAAAGTTTCAAAAATCATGAAAAATGGAACAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
* *
16817483 GAGTCGTCTTCCCATGAAACTTCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *** *
16817548 AAAAATGTCATTGGCACATAGAAATATGAAGATGTTCCTAAACCCACCTACCACCCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* ** * * *
16817613 ACGACTTTTGCATCCCGACTCTCTGGCCGGCGTAGTGCCTGCCCGCCTGCCCGCCCGTCCGCTTG
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-C-G--C-CC-GCCCGCCCGCCCGCTCG
* * * * * *
16817678 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTTTAACATTGAACCAGACTGAGGGTT
641 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
** * * * * *
16817743 GCGGCAGTGGGATCGGCAGCATGCAGAGGAGGACCCGACCGACCCCCGACTTGCGCATCCCACCC
706 GCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
*
16817808 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTAACTTAGGCATACGGAGTTCATTCC
771 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* *
16817873 CAGTCTAAGCATACGGAGTTCATTCCCTA-TCTAAGATCGGACCAGACCGAGGGTTGCGGGAGCA
836 CAGTCTAAGCATACGGAGTTCATTCCC-AGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* **
16817937 CATGCTGGGTCTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCATCG-C----CA
1 CATGCTGGG-CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCA
* * * * * *
16817997 ------GAGAACCTGACCGACGACATTGAGCTTCCGGCGATCGGAGGGGCCGGGGGGTGTACGCA
65 TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCA
* * * *
16818056 CATGATGTGTGATGGGTGCTGGTAGTTGGCCTTTATATTGGCCCCCTATCCCTCATCAAACTTCG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
** *
16818121 ACTACTCACACCCCCTTAAACAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
*
16818186 GTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
***
16818251 ATTTTTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTAAGGAGTTTGGGGCCAAAACTCCT
325 A-TTTTTTTTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * * * * * * *
16818316 TCAGAAGAAGTTTTAAAAAAATCTCGAACTGTAAAAAGTTTCAAAAATTGTGAACAATATAAAAC
388 TCCGAAAAAATTTT-AAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
*
16818381 GAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* * *
16818446 AAAAATGGCATTTGCACGCAGAAATATGAAGAT-TGCCTAAAACCACCTACCACCCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * **
16818510 ACGGCTTGCACATCACGTCTCTCTGGCAGGCGTAGT----------GCCCGCCCGCTCGTTTAAT
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGT
* ** ***
16818565 TGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGATTGGACCGAGGGTTGCGGCA
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCA
* * * *
16818630 GCAGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCC-ACCCTTTGG
712 GCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * * * *
16818694 CCGGCTAAGCACCCGTACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA-TACCAATCT
777 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * ** * * **
16818758 AAGCATACGGAGTTC-TTCCCAGACTATGATCAAACTGAACCGAGGGTTAAGGCAGCA
842 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * ** *
16818815 CATACTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTTGGGGCATAATCGACGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * *
16818880 CGTCGAAGAACCTGACCAGCAGCATTGGGGTTCTGGTGATCGGGGGGGCCGGGGGGTGTGCG-AC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
*
16818944 ATGATGTGTGATGGGTGCTGGTACTTGGCCCTTACT-TTGG-CCCCTATCCCTCATCAAACCTCG
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA-TATTGGCCCCCTATCCCTCATCAAACCTCG
*
16819007 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * * *
16819072 GTCTAAAATGGGGACACTTTTTTCAAATGTTCGCAAAATCTTGTACACTTCAAGTTTTTAGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * * *
16819137 ATTTTTTTTTGCATGCCAACAAAATACAAGGATCATGTCTACCAACTTTGGGGCCAAAACT-ATA
325 A-TTTTTTTTGCATGCCAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT-
** **
16819201 TTTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACG
388 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* *
16819266 AGTCGTCTTGCCGTGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* * * *
16819331 AAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCAACCGACCACCCTATCGATCCA
518 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* ** * * ** * *
16819396 CAGGCTTACGCATCCCGTCTCTCTAACC-G-AT-GT-TG--TTCCTGCCTGCCCGCTCGTTTCGT
583 C-GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * * **
16819455 CGGTTGGCTTAGGCATACAGAGTTCATTCACAGTCTAAGATTGGACCAAACCTAGGGTTGTAGCA
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCA
* * * * *** * *
16819520 GCAGGATCAGTAGCACGC-GAAAGGGGATCCGACCGATCCTTAGCTTGCGCATCCCTCCCCTCTA
712 GCAGGATCGGCAGCACGCAG-AGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * ** * *
16819584 GCCGACTGAACGCTCGTACGGTAATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAATC
776 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * *
16819649 TAAGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCAGACCGAGGGTTGCAGCAGCA
841 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * *
16819708 CATGCTGGGCTCGAGCATGTGCTGGTGCCGTATTTTTCTTTGTCGGGGCACCATCGTC---G-A-
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * *
16819768 ------AGAACTTGACCGGCGACATTGGGGTTCCGGTGATCGGGGGGTCGGGGGGGTGTGCGCAC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* * * * * * *
16819827 ATGATATGCGATGGGTTCTAGTATTTGGCCCTTATATTGGCCCCCTATCCCTCCTCACACCTAGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
*
16819892 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
*
16819957 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * * *
16820022 TTTTTTTGTGCGTGCCAAAAAAAATACAAGGCTCACATCTACCAAGTTTGGGGCCAAAACGCCTT
326 TTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * * * *
16820087 TC-AAATAAATTTAAAAAAATCCTGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACG
389 CCGAAA-AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
16820151 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
16820216 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
518 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * *
16820281 CAGCTTGCGCATCCCGTCTCTCTGGTCGACGTA----G--AGCCCGCCCGCCCACTGGTTTCGTC
583 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGTC
* * * * * * *
16820340 GGTTGCCTTAGGCATACAGAGGTCCTTCCCAGTCTAAGATCGGACCAAATCGAGGGTTGCGGTAG
648 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAG
* * * ** * *
16820405 CAGGATCGGCAGCATAG-AAAGAGGGACCCGGTCGATCCCCGGCTTGCGCATCCCACCCTTCTGG
713 CAGGATCGGCAGCA-CGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * *
16820469 CCGGCTGAGCGCCCGCACGCTCGTTCCGTGGGTTGACTTAGGCAAATGGAGTTCATTCCAAGTCT
777 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* *
16820534 AAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTGCGGCAGCA
842 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * * * **
16820592 CATGCTGGGCTCGAGCATGTACTGCTGCTGCATTTTTCTTCGTAGGGGCACCATCGCCAAAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
** * * * * * *
16820657 CACCAGAGAACCTGACCGACGGCATTGAGGTTTCGGCAATC-GGGGGG-CGGGGGG-GTCCGCAC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* * * *
16820719 GTGATGTACGATGGGGGCTGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCTCGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
* *
16820784 AAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
*
16820849 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * * *
16820914 TTTTTTTGTGCGTGCCAAAAAAAATACAAGGCTCACATCTACCAAGTTTGGGGCCAAAACGCCTT
326 TTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * * *
16820979 TC-AAATAAATTTAAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
389 CCGAAA-AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
16821043 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
*** *
16821108 AAAATGGCATTGGCACATAGAAATATTAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
518 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* *
16821173 CGGCTTGCGCAT-CCGTCTCTCTGGCTGGAGTAGT------GCCCGCCCGCCCGCTCGTTTCGTC
583 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGTC
* * * *
16821231 GGTTGGCTTAGGCATACAGAGTTCATTCCTAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAG
648 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAG
* * * ** * *
16821296 TAGGATCGGCAGGACGCAGAGGGGGACTCGGTCGATCCCTGGCTTGCGCATCCCGTCCCTCTGGC
713 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* ** * * * *
16821361 CGGCTGAACGTACGGACGCTCGTTTCGTTGGTTGGCTTAGGCATACGGAGTTCATTCCTAG--T-
778 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
16821423 --C-TA---AG---ATT----G-----GATC-GA----ACCGAGGGTTGCGGCAGCA
843 AGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * *
16821457 CATGCTAGGCTTGAGAATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * *
16821522 CGTCAGAGAACCTGACCGGCGGCATTGGGGTTTCGGCGATCGGGGTGGCCGGGGGGCTGGGTGTG
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC---GGG--GGGTGTG
* *
16821587 CGCACATGATGTGCGATGGGTGCT-GTACTTGGCCCTTATATTGGGCCCCTATCCCTCATTAAAC
126 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * * **
16821651 CTTGAGAACTCACACCCCCTCAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCTGTTA
191 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
16821716 AAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAG
256 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *
16821781 CTGAATTTTTTTATGCATGCCAACAAGAATACAAGGATCACGTCTACCATGTTAGGGGCCAAAAC
321 CTGAATTTTTTT-TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * * * * *
16821846 ACCTT-CTAAAAATTTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAA
384 TCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* * * *
16821910 AACAAGTCATCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATAAATTTACAAGC
449 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* *
16821975 CATAAAAATGGCATTGGCACT-CAGAAATATGAAGATGTGCCTAAACCCACCTACAACCATATCG
514 CATAAAAATGGCATTGGCA-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * * * * * * *
16822039 ATCCACGGCTTACGCATCCCTTCTCTCTGGCCGACGTAATGCCCACCCGTCCACCAGCCCGCTCA
578 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCG
* * * * * *
16822104 TTTCGTCTGTTGGCATAGGCATACGGAGTTCATTCCCAGTCTAAGATTGCATC-GAACCAAGGGT
641 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGT
* * * ** * *
16822168 TGTGGTAGCAGGATTGGCAGCTTGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCC
705 TGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCC
* * * * *
16822233 CCTCTGGTCAGCCGAGCGCCCGCATGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTC
770 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
* * * * *
16822298 CTAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGTGGCAGCA
835 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * **
16822363 CATGCTGGGCTCGAGCATGTGCTGGTGACACATTTTTCTTCGTCGGGGCACCATCACCGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * *
16822428 C-ACGGAGAACCTGATCGGTGGCATTGGGGTTCCGGCGATCGAGGGGGCCGGGGGTGGGGGGTGT
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC------GGGGGGTGT
* * * * * *
16822492 GCGTACATGATGTGTGATGGGTCCTGGTACTTGGCCCTTACATTGG-CCCTTATCCCTCA-CCAA
125 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * *
16822555 CCTCAAGAACTCGCACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATT
190 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * * *
16822620 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGCCACAAAATATTGTACACTTCAAATTTTTA
255 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * *
16822685 GCTGAATGTTTTTGTGCAAGCCAACAAAAATACAAGGATCACGGCTACCAAGATTGGGGCCAAAA
320 GCTGAAT-TTTTTTTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
**
16822750 CTCCTTCTAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGA
383 CTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGA
* *
16822815 AAACGAGTCGTCTTGCCATGAAACATCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
448 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
16822880 CCATAAAAATGGCATTGGCACGTAGAAAAATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
513 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * * *
16822945 ATCCACAGCTTGCACATCACGTCTCTCTGGCAGGCGTAGT----------GCCCGCCTGCTCGTT
578 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTT
* * * * * *
16823000 TCATCGGTTGGCTTAGGCATACGGACTTCATTCCCAGTCTAAGATTGGATCAAATCGAGGGTTGC
643 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGC
* * * ** * * *
16823065 AGTAGCAGGATCGGCAGAACATAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCACCCCT
708 GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* * * *
16823130 TTGGCCGGCTGAGCGCTCGCACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTTCCA
773 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * * * *
16823195 GTCTAAACATACGGAGTTCATTCCCAATCTAAGATTGGACTGGACCGAGGGTTGCGGAAGCA
838 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * ** ** *
16823257 CGTGCTAGGCTCGGGCATGTGCTGGTGTAGCATTTTTCTTCACCAGGGCACCATCG-CTGGAGCA
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTC-GGAGCA
* * * * * * *
16823321 TGGCCAGAGAACCTAACCAGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTACGCA
65 TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCA
* *
16823386 CATGATGTGCGATGGTTGATGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
16823451 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
*
16823516 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
*
16823581 ATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATTCC
325 ATTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AAAACTCC
* ** *
16823646 -TCCAAAAAAATTTTAAAAAATCTTGAACTGTAAAAAGTTT-AGAAAATCGTGAAAAATAGAAAA
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA-AAAATCGTGAAAAATAGAAAA
*
16823709 CTAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
451 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
16823774 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
516 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * * *
16823839 CACGGCTTGTGCAT-TCGTCTCTCTGGCCGGAGTAGTGCCCGCCCGCCCGCCCACCCGTTCGTTT
581 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTT
* * ** * *
16823903 CGTTGGTTGGCTTAGGCATACAGAGTTCATTCTTAGTCTAAGATCGGACCGGACCGAGGGTTGTG
644 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCG
* * * * *
16823968 GCAGTAGGATCGGCA--ACACATAGAGGG----G---GA--CCCGGCATGCGCATCCCGCCCCTC
709 GCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * * * * *
16824022 TGGCCGACTGAGCACACGCACGCTCGTTTCGTGGGTTGGCTTACGCATACGGAGTTCATTCCTAG
774 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* * * ** *
16824087 TCTAAGGATACAGAGTTCATTCCCAGTCTAAGATCGAAGGGGACCGAGGGTTGCGGTAGCA
839 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * * * *
16824148 CATCCTAGGCTTGAGCATGTGCTGCTGCCGTATTTTTCTTCGTCGGGGCACCATCGTTGGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * *
16824213 CGTCGAAGAACCTGACCGGTGGCATTGGGGTTCCAGCGATCGGGGTGGCCGGGGGGTGGGTGTAT
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGT--GTG--C
*
16824278 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTGTATTGGCCCCCTATCCCTCATCAAACC
127 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* *
16824343 TCGAGAACTCACACCCCCTCAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCGTTAA
192 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
16824408 AGTGTCTGAAATAGGGACAATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
257 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
*
16824473 TGAATTTTTTTTTTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAAC
322 TGAA--TTTTTTTTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* **
16824538 TCCTTCC-AAAAAATTTTGAAAAAT-CCGAACCGTAAAAAGTTT-AGAAAATTATGAAAAATAGA
384 TCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA-AAAATCGTGAAAAATAGA
*
16824600 AAACGAGTCGTCTTGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAG
448 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* *
16824665 CCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
513 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * *
16824730 ATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGCCGTAAT--GCCCGCCCGCCTGCCCGCTCGTT
578 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTT
* * *
16824793 TCGTTGGTTGGCTTAGGCATACGAAGTTCATTCCCAGT-TGAAGATCAGACCAGACCGAGGGTTG
643 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT-AAGATCGGACCAGACCGAGGGTTG
* * * * * * * * ** *
16824857 CGGTAGTAGGATCGGTAGGATGCAGAGGGGGACCCGATCAATCCTCGGCTTATGCATCCCGGCCC
707 CGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
* * * *
16824922 TCTGGTCGACTGAGTGCCCGCACGCTTGTTTCGT-GG--G--TT--G---AC----TT-A-----
772 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * * * *
16824967 AG-C---G--TACGGAGTTCATTCCTAGTCTAAGATCGGACCAGACCAAAGGTTGCAGCAGCA
837 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * ** ** * *
16825024 CATACAGGGCTCGGGCTTGTACTGGTGCCATATTTTTCTTCGTTAGGGCACCATGGTCGGATCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * * * *
16825089 CGTCAGAGAACCTAACCGACGACATTTGGGTTCCGACGAT--AGGGGGCCGGACGGGGTGTGCGC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGG--GGGGTGTGCGC
* * * * *
16825152 ACATGATGTGCAATGGTTGCTGGTGCTTGGCCCTTATATTGGCCGCCTATCCCACATCAAACCTC
129 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
*
16825217 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTAGCCATTAAAG
194 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
* * * *
16825282 TGTCTGAAATGGGGACACTTTTTTCAAATGGACAGAAAATCTTGTACACCTCAAGTTTTTAGCTG
259 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* *
16825347 AATTTTTTTGTGCTTGCCAACAAAAATGCAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
324 AATTTTTTT-TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * *
16825412 TTCTG-AAAAATTTTAACAAATCCC-AACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAAC
387 TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
*
16825475 GAGTCGTCTTGCCATGAAACTTCACGAGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
452 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
16825540 AAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
517 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * * * *
16825605 ACAGCTTGCGTATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCCACCCGCCCGTCCGCTCATTTC
582 ACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTTC
* * *
16825670 GTTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTGCGG
645 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGG
* * * * * * *
16825735 CAGCAAGATCGGCAGCACGCAGTGGGGGACCTGTCCGATCCCCGGCTTGTGCTTCCTGCCCCTCT
710 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * * * * *
16825800 GGCTGGCAGAGCGCCCGCACGCTCATTTTGTGGGTTGACTTAAGCATACGGAGTTCATTCCTAGT
775 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* **
16825865 CTAAG-AT-C--AG---A----C---C----A---GACC--A---AGGGTTACGATAGCA
840 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * ** *
16825899 CATGCTGGGCTCAGGCATGTGCTGGTGCCGTATTTTTCTTCGTTGGGGCACCATTATCGGATCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * *
16825964 CGTCGGAGAACTTGATCC-GCAG-ACTTAGGGTT-C--C---C-------CC-----G-AT-CG-
66 CGTCGGAGAACCTGA-CCGGCGGCA-TTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGC
*
16826006 ----G--G-G-G-TGGTTGCTGGTACTTGAG-CCTTATATTGGCCCCCTATCCCTCA-CTAAACC
129 ACATGATGTGCGATGGGTGCTGGTACTTG-GCCCTTATATTGGCCCCCTATCCCTCATC-AAACC
* * *
16826060 TTGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTGCAGGTTTGCTGCCAGTAGCCATTAA
192 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
16826125 AGTGTCT-AGAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
257 AGTGTCTGA-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
*
16826189 CTGAATTTTTTTTTTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAA
321 CTGAA--TTTTTTTTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* **
16826254 CTCCTTCC-AAAAAATTTTGAAAAATCCCGAACCGTAAAAAGTTT-AGAAAATTATGAAAAATAG
383 CTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA-AAAATCGTGAAAAATAG
*
16826317 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAA
447 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* *
16826382 GCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
512 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * *
16826447 GATCCATGGCTTGCGCATCTCGTCTCTCTGGCCGACGTAGT------GCCCGCCCGCCCGCTCAT
577 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGT
* * * *
16826506 TTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCAGACTGAGGGTTG
642 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG
* * * * * * * * *
16826571 CGGTAG-AGGATCGGTAGCCCGCAGAGGGGGACTCGATCGATCCCCAGCTTGTGCATCCTGTCCC
707 CGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
* * * * ** * * * *
16826635 TCTGGCCGGTTGAGCGCCCACGCGCTCATTTCGTGGGTTGACTTAACCGTACGAAGTTTATTCCT
772 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * *
16826700 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGACTGGGCCGAGGGTTGCGGCAGCA
837 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* ** ** * *
16826763 CATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGTGCCATCGCCGGAACAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
** * * * ** * * *
16826828 CACCAGAGAACCTGACCGACGGCATTGGGTTTCCAACGAT---------TGGAGGGTGTGCGGAC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* * *
16826884 ATGATGTGTGATGGGTGCTGGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACCTCAA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
*
16826949 GAACTCGCACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
16827014 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* *
16827079 TTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAATTCCTT
326 TTTTTTT-TGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
** * *
16827144 CCGAAAAAATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCTTGAAAAATAGAAAATGA
389 CCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
* * * *
16827209 CTCGTTTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAA
454 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* * * *
16827274 AAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCGCCTACCACCCTATCGATCAAC
519 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * **
16827339 GGCTTGCGCATCCCATCTCTCTGGCTGGCGTAGTGCCCGCCCGCCCGCCCGCCCAATCGTTTCGT
584 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * * *
16827404 CGGTTGGCTTAGGTAGACGGAGTTCATTCCCAGTCTAAGATCAGACCAAACTGAGGGTTGTGGCA
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCA
* * * * *
16827469 GCAGGATCGGTAGCACGCAGAGGGGGACCCGGCCGATCCCCGACTTCCGCATCCCTCCCCTCTGG
712 GCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
** *
16827534 CCACCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
777 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* ** * * **
16827599 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAAAGTTACGTCAAAA
842 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* * * * *
16827657 CATGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCAGGGCACCATCGCCAGAGCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * * * * * *
16827722 CGCCGAAGAACCT-ATCCGACAGCATTGGGGCTCCGGCGATCGCGGGTGCCGGGGGGTGTGCGCA
66 CGTCGGAGAACCTGA-CCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCA
* *
16827786 CATGATGTGCGATGGGTGCTGGTACTTGTCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
130 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* * *
16827851 AGAACTCATACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTAACCATTAAAGT
195 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * *
16827916 GTCTGAAATGGGAACATTTTTTTCAAATGGTCCCAAAATCTTGTACACTTCGAGTTTTTAGCTGA
260 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* ** * *
16827981 ATTTTTTTTTGCATGCCAACAAAAATACAAGAATTGCGTCTACCAAGTTTTGGCCCAAAACTCCT
325 A-TTTTTTTTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* *
16828046 TCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
388 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* * * *
16828111 AGTCGTCTTGCCATAAAACTTCACGTGAAGGCTTGAGGGACCATTATGTGAATTTACAAGCCATA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* *
16828176 AAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTAGCACCCTATCGATCCA
518 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
** * * *
16828241 CGGCTTGCAAATCTCGTCTCTCTGGCTGGCGCAGTGCTCGCCCGCCCGCCCGCCCGCTCGTTTCG
583 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCCCGCCCGCCCGCCCGCTCGTTTCG
* * * *
16828306 TCGGTTGGCTTAGG-AGTACGGAGTTCATTCCCATTCTAAGATTGGACCAGATCGAGGGTTGTGG
646 TCGGTTGGCTTAGGCA-TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGG
* * * ** * * * * *
16828370 TAGTAGGATTGATAGCATGCAGAGGGGGACCCGATCGATCCCTGGCCTGCGCATCCTGCCCCTCT
710 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * * *
16828435 GGCCGACTGAGCACCCGCACGCTCGTTTCGTGGGTTGCCTTAGGCATACAGAGTTCATTCCCAGT
775 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
*
16828500 CT----A-A--GA-TTGA-----A--CT---A---GACC-GA---A-GGTTGCGGCAGCA
840 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
* *
16828534 CATGCTGGGCTCGGGCATCTGCTGGTGCCACATTTTTCTTCGTCGGGG---CA----C----CAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* * ** * * *
16828588 CGTCGGAGAACCTGACCCGCAGCATTGGGGTTCCATCGATCGGGGGGGCTGGGAGGTGTGCGCAT
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* *
16828653 ATGATGTGCGATGGGTGATGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
*
16828718 GAACTCACACCCCCTTAAGGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* * *
16828783 TATGAAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCAAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* * * **
16828848 TTTTTTTGTGCATGCCAACAAAAATACAATGATCATGTCCACCAAGCGTGGGGCCAAAACTCCTT
326 TTTTTTT-TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* *
16828913 CCAAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
389 CCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
* *
16828978 GTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAGTTACAAGCCATAA
454 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* * *
16829043 AAATGGCATTGACATGCAGAAATATGAAGATGTGCCTAAACCCACCTAACACCCTATTGATCCAC
519 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * ** *
16829108 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGCGTCCCCCCGCCCATCCGCCCGCTCGTTTTGT
584 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--GTGCGCCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * * *
16829173 CAGTTGGCTTAGGCATACCGAGTTCATTCCTAGTCTAAGATAGGACC-GAACCGAGGGTTGTGGT
647 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGGC
* * * * * * * *
16829237 AGTAGGATCAGTAGCACGCAGAGGGGGACCCGACTGATTCTCGGCTTACACATCCCGCCCCTCTG
711 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
*
16829302 GCCGGCTGAGCGCCCGCATGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
776 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * *
16829367 TATGCATACGGAGTTCATTCCCAGTCTAAGATCAGG-CCGAACCGAGGGTTACGACAGTA
841 TAAGCATACGGAGTTCATTCCCAGTCTAAGATC-GGACCGGACCGAGGGTTGCGGCAGCA
* ** *
16829426 CATGCTGGGATCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGATCAT
1 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
* *
16829491 C-T----G-----G---GG-GGCATTGGGGTT-CGACGATCGGGGGGGCCAGGGGGTGTGCGCAC
66 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
* * *
16829541 ATGATGTGCGATGGGTGCTGGTACTTGGCACTTATATTGGCCCCCTATCGCTCATCAAACCTTGA
131 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
* **
16829606 GAACTGATGCCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
196 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* *
16829671 TCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAA
261 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-A
*
16829736 ATTTTTTGTT-CATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCC
325 ATTTTTT-TTGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * *
16829800 TCTGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTT-GAAAATCGTGAAAAATAGAAAACG
388 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
*
16829864 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTTAGGGACCATTGTATGAATTTACAAGCCATA
453 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-
16829929 AAAAATGGCATTGGCA--CATTGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
517 AAAAATGGCATTGGCATGCA--GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * * *
16829992 CCACGACTTGCGCATCCCGACTCT-TGGCAGGCGTAGT--GCCTGCCCG-CCACCCGCTCGTTTC
580 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTC
* * * * * * * * *
16830053 GTCGGTCGGATTAGGCATATGAAGTTCACTCCCAGTCTAAGATCAGATCGGATCGAGGGTTGCGG
645 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGC-G
*
16830118 CAGCAAGACCAGACCGAGGGTTACGGCAGCAGCATCAGCAGCATGCAGAGAGGGACCCAACCGAT
709 --GC-AG--CAG---GA----T-C-G--GCAG---CA-C-GCA-G-AG-G-GGGACCCGACCGAT
* ** * *
16830183 CCCCGGCTTGTGCATCCCGCCCCTCTGGGAGGCTGAGTGCCCGCACGCTCGTTTCGTGGGTCGAC
749 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
* * * *
16830248 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTAATTCTCAGTCTAAGATCGGATC
814 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
** *
16830313 AAACCGAGGGTTGTGGCAGCA
879 GGACCGAGGGTTGCGGCAGCA
16830334 CATGCTGGGCTCGGG
1 CATGCTGGGCTCGGG
16830349 GATCATTGTC
Statistics
Matches: 27737, Mismatches: 3576, Indels: 1809
0.84 0.11 0.05
Matches are distributed among these distances:
838 110 0.00
839 83 0.00
840 1 0.00
842 2 0.00
844 2 0.00
845 168 0.01
846 74 0.00
847 202 0.01
848 1 0.00
849 1 0.00
850 1 0.00
852 1 0.00
855 2 0.00
856 2 0.00
857 1 0.00
859 3 0.00
863 2 0.00
864 86 0.00
865 120 0.00
866 685 0.02
867 4 0.00
868 2 0.00
869 2 0.00
870 61 0.00
871 702 0.03
872 933 0.03
873 836 0.03
874 289 0.01
875 749 0.03
876 271 0.01
877 480 0.02
878 447 0.02
879 47 0.00
880 248 0.01
881 124 0.00
882 126 0.00
883 171 0.01
884 784 0.03
885 724 0.03
886 200 0.01
887 179 0.01
888 470 0.02
889 280 0.01
890 339 0.01
891 980 0.04
892 560 0.02
893 824 0.03
894 1399 0.05
895 510 0.02
896 831 0.03
897 1253 0.05
898 542 0.02
899 707 0.03
900 336 0.01
901 706 0.03
902 1080 0.04
903 2429 0.09
904 1413 0.05
905 871 0.03
906 674 0.02
907 956 0.03
908 329 0.01
909 435 0.02
910 90 0.00
911 2 0.00
912 4 0.00
913 2 0.00
914 7 0.00
915 1 0.00
916 8 0.00
917 5 0.00
918 10 0.00
919 6 0.00
920 7 0.00
921 6 0.00
922 9 0.00
923 3 0.00
924 4 0.00
925 3 0.00
927 10 0.00
928 1 0.00
929 5 0.00
930 4 0.00
931 1 0.00
932 9 0.00
933 1 0.00
934 3 0.00
935 5 0.00
937 3 0.00
938 8 0.00
939 1 0.00
940 9 0.00
941 3 0.00
943 7 0.00
944 7 0.00
945 1 0.00
946 7 0.00
947 4 0.00
948 5 0.00
949 2 0.00
953 3 0.00
954 3 0.00
955 1 0.00
956 3 0.00
957 7 0.00
958 4 0.00
959 8 0.00
960 3 0.00
961 2 0.00
962 5 0.00
963 6 0.00
964 8 0.00
965 3 0.00
967 5 0.00
968 3 0.00
969 1 0.00
970 9 0.00
971 1 0.00
972 3 0.00
973 5 0.00
974 1 0.00
975 10 0.00
977 3 0.00
978 4 0.00
979 3 0.00
980 7 0.00
981 6 0.00
982 8 0.00
983 6 0.00
984 10 0.00
985 5 0.00
986 8 0.00
987 6 0.00
988 1 0.00
989 6 0.00
990 2 0.00
991 1 0.00
992 1 0.00
993 5 0.00
994 6 0.00
995 4 0.00
997 4 0.00
998 13 0.00
999 11 0.00
1000 14 0.00
1001 17 0.00
1002 17 0.00
1003 44 0.00
1004 31 0.00
1005 3 0.00
1006 14 0.00
1007 6 0.00
1008 1 0.00
1009 2 0.00
1011 1 0.00
1012 3 0.00
1013 1 0.00
1016 1 0.00
1017 3 0.00
1018 1 0.00
1019 1 0.00
1020 1 0.00
1022 2 0.00
1024 686 0.02
1025 647 0.02
1026 808 0.03
1027 520 0.02
1028 746 0.03
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (899 bp):
CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCAC
ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
TTTTTTTTGCATGCCAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
GAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGT
TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCAG
GATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCA
Found at i:16801683 original size:26 final size:26
Alignment explanation
Indices: 16801645--16801700 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
16801635 TGGGTTGACT
* *
16801645 TAAGCATATGGAGTTCATTCTCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
*
16801671 TAAGCATACGGAGTTCCTTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
16801697 TAAG
1 TAAG
16801701 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.27, C:0.23, G:0.20, T:0.30
Consensus pattern (26 bp):
TAAGCATACGGAGTTCATTCCCAGTC
Found at i:16807049 original size:26 final size:26
Alignment explanation
Indices: 16807013--16807065 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16807003 GTTGACTTAG
16807013 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16807039 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16807065 G
1 G
16807066 ATCCGACAGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16808832 original size:26 final size:26
Alignment explanation
Indices: 16808796--16808848 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16808786 GTTGACTTAG
*
16808796 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16808822 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16808848 G
1 G
16808849 ATTGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16811705 original size:158 final size:158
Alignment explanation
Indices: 16811302--16811680 Score: 562
Period size: 158 Copynumber: 2.4 Consensus size: 158
16811292 AGTGCCCGCC
* * * * *
16811302 CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAAA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-GA
* * *
16811367 TCAGACTGAGGGTTGTGGCAGTAGGATCGACAGCACGTAGAGGGGGACCCGACCAATCCCCGGCT
65 TCAGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCAATCCCCGGCT
* * * *
16811432 TGCGCATCCCGCCTCTCTGGCCGGTTTAG
130 TGCGCATCCCGCCCCTCTAGCCGGCTGAG
* **
16811461 CGCCCGCACGCTCATTTTATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAT
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAT
* * * *
16811526 CAGACTGAGGGTTTCGGCAGCAGGATCGACAGCATGCAGAGGGGGACCCGTCCGATCCCCGGCTT
66 CAGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCAATCCCCGGCTT
*
16811591 GCGCATCCTGCCCCTCTAGCCGGCTGAG
131 GCGCATCCCGCCCCTCTAGCCGGCTGAG
16811619 CGCCCGCACGCTCGTTTCGTGGGTTGACTTA-GCATACGGAGTTCATTCCCAGTCTAAGATCG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCG
16811681 GACCGAACCG
Statistics
Matches: 197, Mismatches: 23, Indels: 2
0.89 0.10 0.01
Matches are distributed among these distances:
157 31 0.16
158 111 0.56
159 55 0.28
ACGTcount: A:0.19, C:0.30, G:0.28, T:0.23
Consensus pattern (158 bp):
CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAT
CAGACTGAGGGTTGCGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCAATCCCCGGCTT
GCGCATCCCGCCCCTCTAGCCGGCTGAG
Found at i:16813431 original size:26 final size:26
Alignment explanation
Indices: 16813394--16813446 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16813384 GTTGACTTAG
16813394 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16813420 GCATAC-GAAGTTCATTCCCAGTCTAA
1 GCATACAG-AGTTCATTCCCAGTCTAA
16813446 G
1 G
16813447 ATCAGACTGG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 1 0.04
26 25 0.96
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16814766 original size:26 final size:26
Alignment explanation
Indices: 16814737--16814788 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16814727 AAAACTGCTT
*
16814737 CCGAAAAAATTTTAAAAAATCCTGAA
1 CCGAAAAAAGTTTAAAAAATCCTGAA
* *
16814763 CCGAAAAAAGTTTCAAAAATCGTGAA
1 CCGAAAAAAGTTTAAAAAATCCTGAA
16814789 AAATAGAAAA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.52, C:0.15, G:0.12, T:0.21
Consensus pattern (26 bp):
CCGAAAAAAGTTTAAAAAATCCTGAA
Found at i:16816548 original size:26 final size:26
Alignment explanation
Indices: 16816519--16816570 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16816509 AAAACTGCTT
*
16816519 CCGAAAAAATTTTAAAAAATCCTGAA
1 CCGAAAAAAGTTTAAAAAATCCTGAA
* *
16816545 CCGAAAAAAGTTTCAAAAATCGTGAA
1 CCGAAAAAAGTTTAAAAAATCCTGAA
16816571 AAATAGAAAA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.52, C:0.15, G:0.12, T:0.21
Consensus pattern (26 bp):
CCGAAAAAAGTTTAAAAAATCCTGAA
Found at i:16817891 original size:26 final size:26
Alignment explanation
Indices: 16817855--16817907 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16817845 GTTAACTTAG
16817855 GCATACGGAGTTCATTCCC-AGTCTAA
1 GCATACGGAGTTCATTCCCTA-TCTAA
16817881 GCATACGGAGTTCATTCCCTATCTAA
1 GCATACGGAGTTCATTCCCTATCTAA
16817907 G
1 G
16817908 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCTATCTAA
Found at i:16819656 original size:26 final size:26
Alignment explanation
Indices: 16819626--16819678 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16819616 GTTGACTTAG
16819626 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
16819652 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16819678 G
1 G
16819679 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:16823212 original size:26 final size:26
Alignment explanation
Indices: 16823176--16823226 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16823166 TTGACTTAGG
* * *
16823176 CATATGGAGTTCATTTCCAGTCTAAA
1 CATACGGAGTTCATTCCCAATCTAAA
16823202 CATACGGAGTTCATTCCCAATCTAA
1 CATACGGAGTTCATTCCCAATCTAA
16823227 GATTGGACTG
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.24, G:0.14, T:0.31
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAATCTAAA
Found at i:16824104 original size:26 final size:26
Alignment explanation
Indices: 16824068--16824118 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16824058 TGGCTTACGC
* *
16824068 ATACGGAGTTCATTCCTAGTCTAAGG
1 ATACAGAGTTCATTCCCAGTCTAAGG
16824094 ATACAGAGTTCATTCCCAGTCTAAG
1 ATACAGAGTTCATTCCCAGTCTAAG
16824119 ATCGAAGGGG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.22, G:0.20, T:0.29
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAGTCTAAGG
Found at i:16826723 original size:26 final size:26
Alignment explanation
Indices: 16826684--16826733 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
16826674 GACTTAACCG
* *
16826684 TACGAAGTTTATTCCTAGTCTAAGCA
1 TACGAAGTTCATTCCCAGTCTAAGCA
*
16826710 TACGGAGTTCATTCCCAGTCTAAG
1 TACGAAGTTCATTCCCAGTCTAAG
16826734 ATTGGACTGG
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.32
Consensus pattern (26 bp):
TACGAAGTTCATTCCCAGTCTAAGCA
Found at i:16827611 original size:26 final size:26
Alignment explanation
Indices: 16827575--16827627 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16827565 GTTGACTTAG
16827575 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16827601 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16827627 G
1 G
16827628 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16829373 original size:26 final size:26
Alignment explanation
Indices: 16829344--16829394 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16829334 GTTGACTTAG
16829344 GCATACGGAGTTCATTCCCAGTCTAT
1 GCATACGGAGTTCATTCCCAGTCTAT
16829370 GCATACGGAGTTCATTCCCAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
16829395 AGATCAGGCC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.24, C:0.27, G:0.20, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAT
Found at i:16830288 original size:26 final size:26
Alignment explanation
Indices: 16830252--16830304 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16830242 GTCGACTTAG
* *
16830252 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTAATTCCCAGTCTAA
*
16830278 GCATACAGAGTTAATTCTCAGTCTAA
1 GCATACAGAGTTAATTCCCAGTCTAA
16830304 G
1 G
16830305 ATCGGATCAA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTAATTCCCAGTCTAA
Found at i:16833787 original size:26 final size:26
Alignment explanation
Indices: 16833751--16833803 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16833741 GTTGACTTAG
*
16833751 GCATACGGAGTTCATTCGTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
16833777 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
16833803 G
1 G
16833804 ATCAGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCTAGTCTAA
Found at i:16833898 original size:11 final size:11
Alignment explanation
Indices: 16833882--16833912 Score: 62
Period size: 11 Copynumber: 2.8 Consensus size: 11
16833872 TCGTCGGGGC
16833882 AGCATCGTCGG
1 AGCATCGTCGG
16833893 AGCATCGTCGG
1 AGCATCGTCGG
16833904 AGCATCGTC
1 AGCATCGTC
16833913 AGAGAACCTG
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 20 1.00
ACGTcount: A:0.19, C:0.29, G:0.32, T:0.19
Consensus pattern (11 bp):
AGCATCGTCGG
Found at i:16834694 original size:26 final size:26
Alignment explanation
Indices: 16834664--16834716 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16834654 GTTGACTTAG
*
16834664 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16834690 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
16834716 G
1 G
16834717 ATCAAATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:16836465 original size:26 final size:26
Alignment explanation
Indices: 16836429--16836481 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16836419 GGTGACTTAG
* * *
16836429 GCATACTGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
16836455 GCATACGGAGTTCATTCCCAGCCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
16836481 G
1 G
16836482 ATCGGATTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGCCTAA
Found at i:16837352 original size:26 final size:26
Alignment explanation
Indices: 16837314--16837366 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16837304 GTTGACTTAG
*
16837314 GCATACGGCGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
16837340 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16837366 G
1 G
16837367 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.26, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16839106 original size:26 final size:26
Alignment explanation
Indices: 16839077--16839128 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16839067 GTTAACTTAG
16839077 GCATACGGCA-TTCATTCCCAATCTAA
1 GCATACGG-AGTTCATTCCCAATCTAA
*
16839103 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
16839129 TATCGGACCT
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.29, C:0.29, G:0.15, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:16842559 original size:908 final size:900
Alignment explanation
Indices: 16838251--16844480 Score: 8410
Period size: 907 Copynumber: 7.0 Consensus size: 900
16838241 GGACCGGACT
* * * * *
16838251 AGCAGATGCTGGGCTCTG-GCATGTGCTGGTGTCACATTTTTCTTCGTCGGGGTACCATCGTCGG
1 AGCACATGCTGGGCTC-GAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGG
* * * * *
16838315 AGCATCACCGGAGAACCTGACCGGCTGCATTGAGG-TTCCGACGATCGG-GGGCGTCGGGGGGGT
65 AGCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGG-G-CCGGGGGGT
* * *
16838378 GTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCTCCCTATCCCTCATCA
128 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
16838443 AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAATAGCCT
193 AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG-CA
* *
16838508 TTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
257 TTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
16838573 TAGCTGAATTTTTTTGTGCCTGCCAACAAAAATACAAGGATCACGTCGACCAAGTTTGGGGCCAA
322 TAGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * *
16838638 AAATTCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
387 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
* * *
16838703 AAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCATAAGGGACAATTGTATGAATTTACA
452 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * *
16838768 GGCCATAGAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTAT
517 AGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* ** *
16838833 CGATCCACGGCTTGCGCATGCCGTCTCTCTGGCCGACGTAGTGC-CCGCCCGTCCGTCCGCCCGC
582 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCCGCCCG--C--CCACCCGC
* * *
16838897 TTGTTTCGTCGGTTGGCTTAGGAATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACCGAGG
643 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGAGG
* * * * * *
16838962 GTTGCT-GTAGCAGGATCGACAGCACGTAGAGGGGGACACGGCTGATCCCCGGCTTGCACATCCC
708 GTTG-TGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCC
* * *
16839026 GCCCCTCTGGCCGGCTGAGCGCCCGCACACTCATTT-GCTGGGTTAACTTAGGCATACGGCATTC
772 GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG-TGGGTTGACTTAGGCATACGG-ATTC
* * * * *
16839090 ATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAATATCGGACCTGACC-AAGGTTTACGG
835 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGACGG
*
16839154 T
900 C
* * *
16839155 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTTTTCTTCATCGGGGCACCATCGCCGTA
1 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGA
* * * * *
16839220 GCATCGTTC-GAGAAGCTGACCGACGGCATTGGGG-TTCTGGCGATTGGAGGGGCCGAGGGGGGG
66 GCATC-ATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGGGCC---GGGGGG
*
16839283 TGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
127 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
* * * *
16839348 AAACCTCGAGAACTCACACCCCCTTAAAGAGCTTTTAAGATTTTACAGGTTTGCTGCCAGAAGCT
192 AAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC-
* * *
16839413 ATTAAAGTGTCTGAAATGGGGACACTTTTTTGAAATGGTCACAAAATCTTGTACACTTTGAGTTT
256 ATTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* *
16839478 TTAGCTGAAATATTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCTA
321 TTAGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* * *
16839543 AAACTCCTTCCGAAAAAATTTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAA
386 AAACTCCTTCCGAAAAAATTTT-AAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAA
*
16839608 TAGAAAACGAGTCGTCTTGCCATGAAACTTCAAGTGAAGGCTTAAGGGACCATTGTATGAATTTA
450 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
*
16839673 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
515 CAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* ** ** ** *
16839738 ATCGATCCGCGGCTTGCGCATCCTATCTCTCTGGCCGACGTAGTGC-CTACCCGCCCGCCCGCTC
580 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCCGCCCGCCCACCCGCTC
* * ** **
16839802 GTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTGCTAGTCTAAGATTGGACTGGACCAAGGGT
645 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGAGGGT
* * * * * * * * * *
16839867 TGCGGCAGTAGGATCGGTAGCATGTAGAGGGGAACCCGATCGATCCCCGGCTTGCACATCCCGTC
710 TGTGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCC
* * * * *
16839932 TCTCTGGCCGGCTAAGCACCCGCACG--C---T--T--GTT---TT----AT--GGGTTGA----
775 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGATTCATTCC
*
16839975 C--T-TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG-CGGC
840 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGACGGC
* * * * *
16840032 AGCATATGCTAGGCTCGAGCATGTGTTGGTGCCGTATTTTTCTTCATC-GGGCACCATCATCGGA
1 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGA
* * * *
16840096 GCATCGTCGGGGAACCTGACCGACGACATTGGGGTTT-CGACGATCGGGGGGGCCGGGGGGTGTG
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGGGCCGGGGGGTGTG
16840160 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
131 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
*
16840225 CTTGAGAACTCACACCCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGGCATTA
196 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA-GCATTA
* ** *
16840290 AAGTGTTTGAAATGGGGAC-TTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
260 AAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * * *
16840354 CTGAATTTTTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCCACCAAGTTTGGGGCCAAAAA
325 CTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * * *
16840419 TCCTTCCAAAAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAACCATGAAAAATAGAA
390 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
*
16840484 AACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
455 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* *
16840549 CATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTAGCACCCTATCGA
520 CATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
** * *
16840614 TCCACGGCTTGCGCATCTTGTCTCTCTGGGCGGTGTA--G-T--GCCCGCCAACCCGCTCGTTTC
585 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCCGCCCGCCCACCCGCTCGTTTC
* * *
16840674 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCATCGGACTGAGGGTT-TCG
650 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGAGGGTTGT-G
* ** * * *
16840738 GTAGTAGGATCGATAGCATGCAGAGGGGGACCCGTCCGATCCCCGGCTTGCGCATCCTGCCCCTC
714 GTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * *
16840803 -AGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGTGTTGATTCCCAG
779 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGG-ATTCATTCCCAG
* **
16840867 TCTAAGCATATGGAGTTCATTCCCAGTCTAAGAAT-GGATTGGACCGAGGGTT-ACGGC
843 TCTAAGCATACGGAGTTCATTCCCAGTCTAAG-ATCGGACCGGACCGAGGGTTGACGGC
* * * * * * *
16840924 AGCAGATGCTGGGCTTGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGTACCATCGCCGGA
1 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGA
* * * * *
16840989 GCATCACCGGAGAACCTGACCGGCTGCATTGAGG-TTCCGACGATCGG-GGGCGTCGGGGGGTGT
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGG-GCCGGGGGGTGT
*
16841052 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAA
130 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * *
16841117 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCTTT
195 CCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG-CATT
* * *
16841182 AAAGAGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
259 AAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * *
16841247 GCTG-AATTTTTTGGTGCTTGCCAACAAAAATACAAGGATCACATCGACCAAGTTTGGGGCCAAA
324 GCTGAAATTTTTT-GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * *
16841311 ACTTCTTTCGAAAAAATTTTAAAAAATCCCGAAACGTAAAAAGTTTCAAAAATCGTGAAAAATAA
388 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
* *
16841376 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCATAAGGGACCATTGTATGAATTTACAG
453 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
16841441 GCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
518 GCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * *
16841506 GATCCACGGCTTGCGCATGCCGTCTCTCTGGCCGATGTAGTGC-CCGCCCGCCCGTCCGCCCGCT
583 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCCGCCCG--C--CCACCCGCT
* * * *
16841570 TGTTTCGTCGGTTTGCTTAGGAATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACCGAGGG
644 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGAGGG
* * ** *
16841635 TTGCT-ATAGCAGGATCGACAGCACATAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCCG
709 TTG-TGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
* * *
16841699 CCCCTCTGGCCGGCTGAGCGCCGGCACGCTCGTTTCCTGGGTTGACTTAGGCGTACGGCATTCAT
773 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGG-ATTCAT
* * *
16841764 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACC-AAGGTTGACGGT
837 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGACGGC
* * *
16841827 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGTCGTA
1 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGA
* * *
16841892 GCATCATTGGAGAAGCTGACCGGCGGCATTGGGGTTTCCGACGATCGGAGGGGCCGAGGGGGGGT
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGGGCC---GGGGGGT
*
16841957 GTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
128 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
16842022 AACCTCGAGAACTCACACCCCCTTAATGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCTA
193 AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC-A
* * *
16842087 TTAAAGTGTCTGAAATGGGGACACCTTTTTGAAATTGTCACAAAATCTTGTACACTTTGAGTTTT
257 TTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* *
16842152 TAGCTGAAATATTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
322 TAGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
*
16842217 AACTCCTTCCGAAAAAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATTGTGAAAAAT
387 AACTCCTTCCGAAAAAATTTT-AAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAAT
*
16842282 AGAAAACGAGTCGTCTTGCCATGAAACTTCAAGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
451 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* *
16842347 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACTCTA
516 AAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* *
16842412 TCGATCCGCGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCCTACCCGCCCGCCCGCCCGC
581 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTG-CT--CCGCCCGCCCACCCGC
* * * * *
16842477 TCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTGCTAGTCTATGATCGGACCAGACCGAGG
643 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGAGG
* * *
16842542 GTTGTGGTAGTAGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCCG
708 GTTGTGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
* * *
16842607 CCTCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTTGTGGGTTGAC-T-----TA-GG---C-TT
773 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGATTCATT
*
16842661 ---A--C---G---A---AGTTCATTCCCAATCTAAGATCGGACCGGACCGAGGGTTG-CGGC
838 CCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGACGGC
* *
16842709 AGCACATGCTGGGCTC-AGGCATGTGTTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGG
1 AGCACATGCTGGGCTCGA-GCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGG
* * * *
16842773 AGCATCGTCGGGGAACCTGACCGACGACATTGGGGTTT-CGACGATCGGGGGGGCCGGGGGGGTG
65 AGCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGGGCC-GGGGGGTG
16842837 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
129 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
16842902 ACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGGCAT
194 ACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA-GCAT
* *
16842967 TAAAGTGTCTGAAATGGGGAC-CCTTTTTTGAAATGGTCACAAAATCTTGTACACTTTGAGTTTT
258 TAAAGTGTCTGAAATGGGGACACC-TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* *
16843031 TAGCTGAAATATTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAA
322 TAGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
16843096 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
387 AACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
*
16843161 GAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG-ATTTACA
452 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* *
16843225 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCGACCTACCACCCTAT
517 AGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* *
16843290 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G-T--G-CC-CTC-CCC-CTCGT
582 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCCGCCCGCCCACCCGCTCGT
* * * *
16843346 TTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTGTAAGATTGCACCAGACTGAGGGTTG
647 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGAGGGTTG
* * * * * * * *
16843411 TGGTAGCAGTATTGGCAGCACGCAGAGGGGCACCCGGCCAACCCCCGACTTGCGTATCCCGCCCC
712 TGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
* *** *
16843476 TCTAGCCTATTGAGCGCCCGCACGCTCGTTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCC
777 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA-TTCATTCCC
* * * * **
16843541 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTT-ATGAT
841 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGACGGC
* * * * * * *
16843600 AGCACATGTTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGTGGCACTATCG-CTAG
1 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTC-GG
* * *
16843664 AGCATCATCGGAGAACCTGACCGTCGGCATTGGGG-TTCCGACGATC-AAGGGGTCGGGGGGTGT
65 AGCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGGGCCGGGGGGTGT
* * *
16843727 GCGCACATGATGTGCGATGGGTGCT-GTGACCTAGCCCTTATATTGGCCCCCTATCCCCCATCAA
130 GCGCACATGATGTGCGATGGGTGCTGGT-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
16843791 ACCTTGAGAACTCACACCCCCTTATAGAGCATTTGAGATTTTACAGATTTGCTGCCAGTAGCAAT
194 ACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC-AT
*
16843856 TAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTT
258 TAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
*
16843921 AGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
323 AGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * *
16843986 ACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAG
388 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
*
16844051 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAA
453 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * *
16844116 TCGATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
518 GCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * ** *
16844181 GATCCACGGTTTACGCATCCCGTCTCTCTGGCCGACGTAGTGCTCACCTGCCCGCATGTCTACCC
583 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCT--CC-GCCCGC----CCACCC
* * * * * ** * *
16844246 ACTCATTTCATCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCGGACTGA
641 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGA
* * *
16844311 GGGTTGCGGCT-GCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGTGCATC
706 GGGTTGTGG-TAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATC
* * * *
16844375 CCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCTTTTCATGGGTTGACTTAGGCATACGGAGTT
770 CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA-TT
*
16844440 CATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAG
834 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG
16844481 CATATCTGGA
Statistics
Matches: 4746, Mismatches: 449, Indels: 260
0.87 0.08 0.05
Matches are distributed among these distances:
865 149 0.03
866 22 0.00
867 130 0.03
868 3 0.00
869 2 0.00
871 202 0.04
872 120 0.03
873 153 0.03
874 2 0.00
875 6 0.00
876 54 0.01
877 198 0.04
878 108 0.02
879 276 0.06
880 4 0.00
881 17 0.00
882 125 0.03
883 6 0.00
884 5 0.00
885 9 0.00
887 2 0.00
888 6 0.00
889 364 0.08
890 114 0.02
891 131 0.03
892 94 0.02
893 212 0.04
894 308 0.06
896 4 0.00
897 1 0.00
898 7 0.00
899 2 0.00
900 2 0.00
901 3 0.00
902 132 0.03
903 327 0.07
904 108 0.02
905 12 0.00
906 467 0.10
907 472 0.10
908 378 0.08
909 1 0.00
910 1 0.00
912 7 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.26
Consensus pattern (900 bp):
AGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGA
GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTTCCGACGATCGGAGGGGCCGGGGGGTGTG
CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCATTAA
AGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
TGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
ATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCCGCCCGCCCACCCGCTCGTTTCG
TCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACTGAGGGTTGTGGT
AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGATTCATTCCCAGTCT
AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGACGGC
Found at i:16843558 original size:26 final size:26
Alignment explanation
Indices: 16843522--16843574 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16843512 GTTGACTTAG
16843522 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16843548 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
16843574 G
1 G
16843575 ATCAGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:16843866 original size:889 final size:891
Alignment explanation
Indices: 16838251--16844480 Score: 8212
Period size: 906 Copynumber: 7.0 Consensus size: 891
16838241 GGACCGGACT
* * * * * *
16838251 AGCAGATGCTGGGCTCTGGCATGTGCTGGTGTCACATTTTTCTTCGTCGGGGTACCATCGTCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGT-GGA
* * * * * *
16838316 GCATCACCGGAGAACCTGACCGGCTGCATTGAGGTTCCGACGATCGGGGGCGTCGGGGGGGTGTG
65 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGG-GGCCGGGGGGTGTG
* * *
16838381 TGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCTCCCTATCCCTCATCAAAC
129 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * *
16838446 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAATAGCCTTTA
194 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG-CATTA
* *
16838511 AAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
258 AAGTGTCTGAAATGGGGACCCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * * * *
16838576 CTGAATTTTTTTGTGCCTGCCAACAAAAATACAAGGATCACGTCGACCAAGTTTGGGGCCAAAAA
323 CTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * *
16838641 TTCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAA
388 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* * *
16838706 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCATAAGGGACAATTGTATGAATTTACAGGC
453 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* *
16838771 CATAGAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGA
518 CATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* ** * *
16838836 TCCACGGCTTGCGCATGCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGTCCGTCCGCCCGCTTGT
583 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGT----G--C--CCGT-CACCCGCTCGT
* * *
16838901 TTCGTCGGTTGGCTTAGGAATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACCGAGGGTTG
639 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCACCAGACTGAGGGTTG
* * * * * *
16838966 CT-GTAGCAGGATCGACAGCACGTAGAGGGGGACACGGCTGATCCCCGGCTTGCACATCCCGCCC
704 -TGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
* * *
16839030 CTCTGGCCGGCTGAGCGCCCGCACACTCATTT-GCTGGGTTAACTTAGGCATACGGCA-TTCATT
768 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG-TGGGTTGACTTAGGCATACGG-AGTTCATT
* * * * * * *
16839093 CCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAATATCGGACCTGACCAAGGTTTACGGT
831 CCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGA-CGAGGGTTACGGC
* * * *
16839155 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTTTTCTTCATCGGGGCACCATCGCCGTA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCG-TGGA
* * * * * *
16839220 GCATCGTTC-GAGAAGCTGACCGACGGCATTGGGGTTCTGGCGATTGGAGGGGCCGAGGGGGGGT
65 GCATC-ATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC---GGGGGGT
*
16839284 GTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
126 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * *
16839349 AACCTCGAGAACTCACACCCCCTTAAAGAGCTTTTAAGATTTTACAGGTTTGCTGCCAGAAGCTA
191 AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC-A
* * *
16839414 TTAAAGTGTCTGAAATGGGGACACTTTTTTGAAATGGTCACAAAATCTTGTACACTTTGAGTTTT
255 TTAAAGTGTCTGAAATGGGGACCCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* *
16839479 TAGCTGAAATATTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCTAA
320 TAGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
16839544 AACTCCTTCCGAAAAAATTTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAAT
385 AACTCCTTCCGAAAAAATTTT-AAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAAT
*
16839609 AGAAAACGAGTCGTCTTGCCATGAAACTTCAAGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
449 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
*
16839674 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
514 AAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* ** ** * *
16839739 TCGATCCGCGGCTTGCGCATCCTATCTCTCTGGCCGACGTAGTGCCTACCCGCCCGCCCGCTCGT
579 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTG----CCCG-TCACCCGCTCGT
* * * ** **
16839804 TTCGTCGGTTGGCTTAGGCATACAGAGTTCATTGCTAGTCTAAGATTGGACTGGACCAAGGGTTG
639 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCACCAGACTGAGGGTTG
* * * * * * * * * * *
16839869 CGGCAGTAGGATCGGTAGCATGTAGAGGGGAACCCGATCGATCCCCGGCTTGCACATCCCGTCTC
704 TGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
* * * **
16839934 TCTGGCCGGCTAAGCACCCGCACGCTTGTTTTATGGGTTGACTTAGGCATACGGAGTTCATTCCC
769 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
*
16839999 AGTCTAAG-AT-C-G-G---A----C---C---G----GA-C---CGAGGGTTGCGGC
834 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACGAGGGTTACGGC
* * * * * *
16840032 AGCATATGCTAGGCTCGAGCATGTGTTGGTGCCGTATTTTTCTTCATC-GGGCACCATCATCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGT-GGA
* * * *
16840096 GCATCGTCGGGGAACCTGACCGACGACATTGGGGTTTCGACGATCGGGGGGGCCGGGGGGTGTGC
65 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGC
16840161 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
130 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
16840226 TTGAGAACTCACACCCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGGCATTAA
195 TTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA-GCATTAA
* * *
16840291 AGTGTTTGAAATGGGGA-CTTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
259 AGTGTCTGAAATGGGGACCCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * * *
16840355 TGAATTTTTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCCACCAAGTTTGGGGCCAAAAAT
324 TGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * * *
16840420 CCTTCCAAAAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAACCATGAAAAATAGAAA
389 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
*
16840485 ACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
454 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* *
16840550 ATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTAGCACCCTATCGAT
519 ATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
** * *
16840615 CCACGGCTTGCGCATCTTGTCTCTCTGGGCGGTGTAGTGCCCGCCAACCCGCTCGTTTCGTCGGT
584 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCCCGTC-ACCCGCTCGTTTCGTCGGT
* * *
16840680 TGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCATCGGACTGAGGGTT-TCGGTAGTA
648 TGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCACCAGACTGAGGGTTGT-GGTAGCA
** * * * *
16840744 GGATCGATAGCATGCAGAGGGGGACCCGTCCGATCCCCGGCTTGCGCATCCTGCCCCTC-AGCCG
712 GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* *
16840808 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGTGTTGATTCCCAGTCTAAG
777 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * **
16840873 CATATGGAGTTCATTCCCAGTCTAAGAAT-GGATTGGACCGAGGGTTACGGC
842 CATACGGAGTTCATTCCCAGTCTAAG-ATCAGACCGGA-CGAGGGTTACGGC
* * * * * *
16840924 AGCAGATGCTGGGCTTGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGTACCATCGCCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCG-TGGA
* * * * * *
16840989 GCATCACCGGAGAACCTGACCGGCTGCATTGAGGTTCCGACGATCGGGGGCGTCGGGGGGTGTGC
65 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGC
*
16841054 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACC
130 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * *
16841119 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCTTTAA
195 TTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG-CATTAA
* * *
16841184 AGAGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
259 AGTGTCTGAAATGGGGACCCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * * *
16841249 TG-AATTTTTTGGTGCTTGCCAACAAAAATACAAGGATCACATCGACCAAGTTTGGGGCCAAAAC
324 TGAAATTTTTT-GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * * *
16841313 TTCTTTCGAAAAAATTTTAAAAAATCCCGAAACGTAAAAAGTTTCAAAAATCGTGAAAAATAAAA
388 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* *
16841378 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCATAAGGGACCATTGTATGAATTTACAGGC
453 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
16841443 CATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
518 CATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * *
16841508 TCCACGGCTTGCGCATGCCGTCTCTCTGGCCGATGTAGTGCCCGCCCGCCCGTCCGCCCGCTTGT
583 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGT--------GCCCGT-CACCCGCTCGT
* * * *
16841573 TTCGTCGGTTTGCTTAGGAATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGACCGAGGGTTG
639 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCACCAGACTGAGGGTTG
* * ** *
16841638 CT-ATAGCAGGATCGACAGCACATAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCCGCCC
704 -TGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
* * *
16841702 CTCTGGCCGGCTGAGCGCCGGCACGCTCGTTTCCTGGGTTGACTTAGGCGTACGGCA-TTCATTC
768 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGG-AGTTCATTC
* * *
16841766 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGTTGACGGT
832 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACGAGGGTT-ACGGC
* * * *
16841827 AGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGTCGTA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGT-GGA
* * * *
16841892 GCATCATTGGAGAAGCTGACCGGCGGCATTGGGGTTTCCGACGATCGGAGGGGCCGAGGGGGGGT
65 GCATCATCGGAGAACCTGACCGACGGCATTGGGG-TTCCGACGATCGGGGGGGCC---GGGGGGT
*
16841957 GTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
126 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
16842022 AACCTCGAGAACTCACACCCCCTTAATGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCTA
191 AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC-A
* * *
16842087 TTAAAGTGTCTGAAATGGGGACACC-TTTTTGAAATTGTCACAAAATCTTGTACACTTTGAGTTT
255 TTAAAGTGTCTGAAATGGGGAC-CCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* *
16842151 TTAGCTGAAATATTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
319 TTAGCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
*
16842216 AAACTCCTTCCGAAAAAATTTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATTGTGAAAAA
384 AAACTCCTTCCGAAAAAATTTT-AAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAA
*
16842281 TAGAAAACGAGTCGTCTTGCCATGAAACTTCAAGTGAAGGCTTAAGGGACCATTGTATGAATTTA
448 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
16842346 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACTCT
513 CAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * *
16842411 ATCGATCCGCGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCCTACCCGCCCGCCCGCCCG
578 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTA--G--T----GCCCG-TCACCCG
* * * * * *
16842476 CTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTGCTAGTCTATGATCGGACCAGACCGAG
634 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCACCAGACTGAG
* * *
16842541 GGTTGTGGTAGTAGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCACATCCC
699 GGTTGTGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCC
* * * * *
16842606 GCCTCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTTGTGGGTTGACTTAGGCTTACGAAGTTCA
764 GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* *
16842671 TTCCCAATCTAAG-AT-C-G-G---A----C---C---G----GA-C---CGAGGGTTGCGGC
829 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACGAGGGTTACGGC
* * *
16842709 AGCACATGCTGGGCTCAGGCATGTGTTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGT-GGA
* * * *
16842774 GCATCGTCGGGGAACCTGACCGACGACATTGGGGTTTCGACGATCGGGGGGGCCGGGGGGGTGTG
65 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTG
16842839 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
129 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
16842904 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGGCATTA
194 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA-GCATTA
* *
16842969 AAGTGTCTGAAATGGGGACCCTTTTTTGAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAG
258 AAGTGTCTGAAATGGGGACCCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* *
16843034 CTGAAATATTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAC
323 CTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
16843099 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
388 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
*
16843164 AACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG-ATTTACAAGC
453 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* *
16843228 CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCGACCTACCACCCTATCGA
518 CATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* *
16843293 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-TC-CCC-CTCGTTTCGTCGAT
583 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCCCGTCACCCGCTCGTTTCGTCGGT
* *
16843355 TGGCTTAGGCATACGGAGTTCATTCCCAGTGTAAGATTGCACCAGACTGAGGGTTGTGGTAGCAG
648 TGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCACCAGACTGAGGGTTGTGGTAGCAG
* * * * * * * * * **
16843420 TATTGGCAGCACGCAGAGGGGCACCCGGCCAACCCCCGACTTGCGTATCCCGCCCCTCTAGCCTA
713 GATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* *
16843485 TTGAGCGCCCGCACGCTCGTTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
778 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * **
16843550 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTATGAT
843 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGA-CGAGGGTTACGGC
* * * * * *
16843600 AGCACATGTTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGTGGCACTATCGCTAGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCG-TGGA
* ** *
16843665 GCATCATCGGAGAACCTGACCGTCGGCATTGGGGTTCCGACGATC-AAGGGGTCGGGGGGTGTGC
65 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGC
* * *
16843729 GCACATGATGTGCGATGGGTGCT-GTGACCTAGCCCTTATATTGGCCCCCTATCCCCCATCAAAC
130 GCACATGATGTGCGATGGGTGCTGGT-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* *
16843793 CTTGAGAACTCACACCCCCTTATAGAGCATTTGAGATTTTACAGATTTGCTGCCAGTAGCAATTA
194 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC-ATTA
*
16843858 AAGTGTCTGAAATGGGGACACC-TTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTTA
258 AAGTGTCTGAAATGGGGAC-CCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
16843922 GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
322 GCTGAAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * *
16843987 CTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGA
387 CTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGA
* *
16844052 AAACGAGTCGTCTTGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAT
452 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* *
16844117 CGATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
517 CCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * *
16844182 ATCCACGGTTTACGCATCCCGTCTCTCTGGCCGACGTAGTGCTCACCTGCCCGCATGTCTACCCA
582 ATCCACGGCTTGCGCATCCCGTCTCTCTGG-C--CG--GTG-T-A-GTG-CC-C--GTC-ACCCG
* * * * * * *
16844247 CTCATTTCATCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAG-ATCGGACTGA
634 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGAT-TGCACCAGACTGA
* * *
16844311 GGGTTGCGGCT-GCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGTGCATC
698 GGGTTGTGG-TAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATC
* * * *
16844375 CCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCTTTTCATGGGTTGACTTAGGCATACGGAGTT
762 CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
*
16844440 CATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAG
827 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG
16844481 CATATCTGGA
Statistics
Matches: 4724, Mismatches: 471, Indels: 260
0.87 0.09 0.05
Matches are distributed among these distances:
865 177 0.04
866 69 0.01
867 130 0.03
868 1 0.00
869 6 0.00
870 1 0.00
871 202 0.04
872 119 0.03
873 152 0.03
874 2 0.00
875 3 0.00
876 55 0.01
877 161 0.03
878 100 0.02
879 277 0.06
880 3 0.00
881 19 0.00
882 92 0.02
883 7 0.00
886 3 0.00
887 5 0.00
888 4 0.00
889 364 0.08
890 104 0.02
891 105 0.02
892 55 0.01
893 213 0.05
894 308 0.07
895 2 0.00
896 2 0.00
897 2 0.00
898 2 0.00
899 3 0.00
900 2 0.00
901 2 0.00
902 138 0.03
903 371 0.08
904 111 0.02
905 7 0.00
906 468 0.10
907 466 0.10
908 409 0.09
910 1 0.00
912 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.26
Consensus pattern (891 bp):
AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTGGAG
CATCATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCG
CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
TGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCATTAAAG
TGTCTGAAATGGGGACCCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
AAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
TTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
AAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
ACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCCCGTCACCCGCTCGTTTCGTCGGTTGG
CTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGCACCAGACTGAGGGTTGTGGTAGCAGGAT
CGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATA
CGGAGTTCATTCCCAGTCTAAGATCAGACCGGACGAGGGTTACGGC
Found at i:16844485 original size:26 final size:26
Alignment explanation
Indices: 16844428--16844485 Score: 107
Period size: 26 Copynumber: 2.2 Consensus size: 26
16844418 GTTGACTTAG
*
16844428 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
16844454 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
16844480 GCATAT
1 GCATAT
16844486 CTGGAGATGC
Statistics
Matches: 31, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 31 1.00
ACGTcount: A:0.28, C:0.24, G:0.19, T:0.29
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGTCTAA
Found at i:16844630 original size:26 final size:26
Alignment explanation
Indices: 16844588--16844638 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
16844578 GGTCCGATCA
**
16844588 TAGACTGGGAATGAACT-TCGTATGCT
1 TAGACTGGGAACAAACTCT-GTATGCT
16844614 TAGACTGGGAACAAACTCTGTATGC
1 TAGACTGGGAACAAACTCTGTATGC
16844639 CTAAGTTAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
26 21 0.95
27 1 0.05
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAACAAACTCTGTATGCT
Found at i:16845517 original size:26 final size:26
Alignment explanation
Indices: 16845488--16845540 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16845478 CCAATCCGAT
*
16845488 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16845514 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16845540 C
1 C
16845541 CTAAGTCAAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16848028 original size:25 final size:26
Alignment explanation
Indices: 16847989--16848038 Score: 84
Period size: 25 Copynumber: 2.0 Consensus size: 26
16847979 GGTCTGATCC
*
16847989 TAGACTGGGAATGAACTCCTTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
16848015 TAGACT-GGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16848039 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
25 17 0.74
26 6 0.26
ACGTcount: A:0.28, C:0.20, G:0.24, T:0.28
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:16848950 original size:26 final size:26
Alignment explanation
Indices: 16848914--16848966 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16848904 TCGATCCGAT
* *
16848914 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
16848940 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
16848966 C
1 C
16848967 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:16849327 original size:881 final size:859
Alignment explanation
Indices: 16847350--16850579 Score: 3501
Period size: 881 Copynumber: 3.6 Consensus size: 859
16847340 CTACGTCGAC
* * * *
16847350 CAGAGAGACGGGATTCGCAAGTCGTGGATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCAT
1 CAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* ** *
16847415 ATTTCTACGTGTGAATGCCATTTTTATGGCTTGTAAATTCATCCAATGGTCCCTTAAGCCTT-AC
66 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * *
16847479 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTC
131 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAACTTTTTGCGGTTC
* * *
16847544 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACCTGGTAGACATGATCCTTGTAT
195 GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
16847609 TTTTGTTGGCATGCACAAAAAAA-TCAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTT
260 TTTTGTTGGCATGCACAAAAAAATTTAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* *
16847673 GAAAAAAATGTCCCCATTTCAGGCACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
324 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
*
16847738 GCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
389 GCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGA-GGATAGGGGGCCAATATAAGGG-C-AG
* * * * * *
16847803 TACCAGCACCCATTGCACATCATGTGTGCACACCCCCCTCGGCCCACCCGATCG-TCGGAACCCT
450 TACCAGCACCCATCGCACATCATGCGCG-ACA--CCCC-CAGCCCCCCCGATCGCT-GGAACCCC
* * * * *
16847867 AATGCCGTCGGTCAGGTTCTCCGATGATGCTTCAGCGATAGTGCCCCGACGAAGAAAAATGCCGC
510 AATGCCGTCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAAAGCAGC
* * * * * * * *
16847932 A-CCAGCACATGCCCGAGCCCAGCATGTGCAACCGCAACCCTCGGTTCGGTCTGATCCTAGACTG
575 ACCCA-CACATGCCCGAACCCAGCATGTGCTACCGCAAACCTCAGTCCGATCCGATCTTAGACTG
* * * * * **
16847996 GGAATGAACTCCTTATGCTTAGACTGG-AATGAACTCCGTATGCCTAAGTCAACCCACGAAATGA
639 GGAATCAACTTCGTATGCGTAAACTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAA
* * ** * * ** * ** *
16848060 GCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATACGTAAATCGAGGATCGGTCAGGTCTCCA-
704 GCGTGCGGGCGCTCAGTCGGCCAGAGGGATGGGATGCGCAAGCCGGGGATCGACCGGGTC-CCAC
* * * ** * * **
16848124 TCTGCGTGCTACTGATCCTACTACCACAACCTTCAGTCCGGTCTGATCTTAGACTGGGAATGAAC
768 TCTACATCCTACCAATCCTACTACCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAAC
*
16848189 TTCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGACGAGCGAGCGGG
833 TCCGTATGCCT------A--GAC---A-G-GC--GC--AC-A-C---C--G
*
16848240 CACTACATCGGTCGAGAGACGAGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGG
1 -----CA------GAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGG
*
16848305 CACATCTTCATATTTCTGCGTGCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCT
55 CACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
*
16848370 TAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT
120 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC-AAACT
* *
16848435 TTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCTAAACTTGGTAGACAT
184 TTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* * * *
16848500 GGTCCGTGTATTTTTGTTGGCATGCATAAAAAAATTTAGCTAACAACTCGAAGTGTACAAGAGTT
249 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAA-AACTCGAAGTGTACAAGATTT
* *
16848565 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCAGTA
313 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
16848630 AAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAATA
378 AAATCTCAAATGCTCTTTAAGGG-GTGTGAGTTCTCGAGGTTTGATGAG-GATAGGGGGCCAATA
** * *
16848695 TAA-GG-AGTACTGGCACCCATCGCACATCATGTGCGACACCCCCAGCCCTCCCGATCGCTGGAA
441 TAAGGGCAGTACCAGCACCCATCGCACATCATGCGCGACACCCCCAGCCCCCCCGATCGCTGGAA
*
16848758 CCCCAATGCCGTCGGTCAGGTTCTCCAACGATGCTCCAGCGATGGTGCCCCGGTACATGCCCAAG
506 CCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCC-G-AC--G---AAG
16848823 CCCAAGTCTAGCATGCCCAAGCCCAGCATGTGCGGCCCCAGCACATGCCC-AAGCCCAGCATGTG
564 ---AA----A--A-----AAG--CAGCA--------CCCA-CACATGCCCGAA-CCCAGCATGTG
* * *
16848887 CTACCG-AAATCCTCAGTTCGATCCGATCTTAGACTGGGAATGAAC-TCTGTATGCTTAAACTGG
603 CTACCGCAAA-CCTCAGTCCGATCCGATCTTAGACTGGGAATCAACTTC-GTATGCGTAAACTGG
* * *
16848950 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG-CTGGCCAGAG
666 CAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGTC-GGCCAGAG
* * * * * **
16849014 GGATGGGATGCGTAAGTCGGGGATCGACCGGGTCACC-CTCTGCATCCTATCGATCCTACTACTG
730 GGATGGGATGCGCAAGCCGGGGATCGACCGGGTC-CCACTCTACATCCTACCAATCCTACTACCA
** * * * *
16849078 CAACCCTTGGTTCT-GTCCAATCTTAGATTGGGAATGAATTTCGTATG-CT-TA-A-GC-CA-A-
794 CAACCCTCAG-TCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAGACAGGCGCACAC
16849135 C-
858 CG
* *
16849136 CAGAGAGACGGGATGCGCAAG-CGTGGATCGATAGGGTGGT-GGTGGGTTTAGGCAC-TTTTCAT
1 CAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
*
16849198 ATTT-TGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
66 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* **
16849262 GTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAATCTTTTCACGGTTC
131 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAA-CTTTTTGCGGTTC
* * * * *
16849327 GAGATTTTTTAAAATGTTTTCGGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGAACCTTGTAT
195 GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * *
16849392 TTTTGTTGGCTTGCACAAAAAAATTTAACTAAAGACTCGAAGTGTATAAGATTTTTGTGACCATT
260 TTTTGTTGGCATGCACAAAAAAATTTAGCTAAA-ACTCGAAGTGTACAAGA-TTTTGTGACCATT
* *
16849457 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACTTGTAAAATCTCAAA
323 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* *
16849522 TGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGTGGCCAATATAAGGGCCAG
388 TGCTCTTT-AAGGGGTGTGAGTTCTCGAGGTTTGATGA-GGATAGGGGGCCAATATAAGGG-CA-
* * **
16849587 GTACCAGCACCCATCGCACATCATGGGCGCACACCCCCTCCGGCCCCCCCGATCGCCAGAACCCC
449 GTACCAGCACCCATCGCACATCATGCGCG-ACA--CCC-CCAGCCCCCCCGATCGCTGGAACCCC
* * * * * * * *
16849652 AATACCGCCGATCAGGTTCTCCGGCAATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCAGC
510 AATGCCGTCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAAAGCAGC
* * * *
16849717 ACCTACACATGCCCGAACCCAGCATGTGCTGCCGCAAACCTCGGTCCGGTCCGATCTTAGACTGG
575 ACCCACACATGCCCGAACCCAGCATGTGCTACCGCAAACCTCAGTCCGATCCGATCTTAGACTGG
* *
16849782 GAATCAACTTCGTATGCGTAGATTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAG
640 GAATCAACTTCGTATGCGTAAACTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAG
* * * * * * *
16849847 CGTGTGGGTGCTCAGTCGGCCAGAGGGGTGGGATGTGCAAGCCGGGGATGGGCCTGGTCCCACTC
705 CGTGCGGGCGCTCAGTCGGCCAGAGGGATGGGATGCGCAAGCCGGGGATCGACCGGGTCCCACTC
* * * * *
16849912 TACGTGCTACCAATCCTGCTGCCACAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTC
770 TACATCCTACCAATCCTACTACCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTC
16849977 CGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGAGCACTACGCCGG
835 CGTATGCCT---------------A-GA-CA----GGC--GCAC-A--CC-G
16850029 TCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
1 -CAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* *
16850094 TATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCA
65 TATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * *
16850159 CGTGAAGTTTCTTGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTT
130 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAACTTTTTGCGGTT
*
16850224 TGGGATTTTTTAAAATTTTTTCAGAAGGA-TTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGT
194 CGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT-TGGCCCCAAACTTGGTAGACGTGATCCTTGT
* *
16850288 ATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
258 ATTTTTGTTGGCATGCACAAAAAAATTTAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCAT
16850353 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
322 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
*
16850418 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAAGGATAAGGGGCCAATATAAGGGCCA
387 ATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATG-AGGATAGGGGGCCAATATAAGGG-C-
* * *
16850483 AGTACCAGCACCCATCGCACATCATATGCGCAGACCCTCCCCCTGACCCCCCCAATCG-TCGGAA
448 AGTACCAGCACCCATCGCACATC--ATGCGC-GA--CACCCCCAG-CCCCCCCGATCGCT-GGAA
* *
16850547 CCCCAATGTCGTCTGTCAGGTTCTCCGACGATG
506 CCCCAATGCCGTCGGTCAGGTTCTCCGACGATG
16850580 GCACCCCGAC
Statistics
Matches: 2011, Mismatches: 200, Indels: 244
0.82 0.08 0.10
Matches are distributed among these distances:
857 5 0.00
858 207 0.10
859 13 0.01
867 5 0.00
869 2 0.00
874 1 0.00
876 2 0.00
878 1 0.00
880 6 0.00
881 216 0.11
882 131 0.07
883 28 0.01
884 18 0.01
885 19 0.01
886 29 0.01
887 3 0.00
888 3 0.00
889 4 0.00
890 61 0.03
891 3 0.00
894 21 0.01
895 83 0.04
896 23 0.01
897 168 0.08
898 213 0.11
899 87 0.04
900 1 0.00
901 120 0.06
902 151 0.08
903 146 0.07
904 1 0.00
905 2 0.00
906 1 0.00
908 1 0.00
909 1 0.00
911 3 0.00
914 1 0.00
916 2 0.00
918 5 0.00
926 4 0.00
927 76 0.04
928 142 0.07
929 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.27
Consensus pattern (859 bp):
CAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAACTTTTTGCGGTTCG
GGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
TTTGTTGGCATGCACAAAAAAATTTAGCTAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGATAGGGGGCCAATATAAGGGCAGTACCAG
CACCCATCGCACATCATGCGCGACACCCCCAGCCCCCCCGATCGCTGGAACCCCAATGCCGTCGG
TCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAAAGCAGCACCCACACATG
CCCGAACCCAGCATGTGCTACCGCAAACCTCAGTCCGATCCGATCTTAGACTGGGAATCAACTTC
GTATGCGTAAACTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGC
TCAGTCGGCCAGAGGGATGGGATGCGCAAGCCGGGGATCGACCGGGTCCCACTCTACATCCTACC
AATCCTACTACCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAG
ACAGGCGCACACCG
Found at i:16850288 original size:898 final size:899
Alignment explanation
Indices: 16847114--16850685 Score: 4255
Period size: 898 Copynumber: 4.0 Consensus size: 899
16847104 CCGGTCTGAT
* * * * * *
16847114 CTTAGAATGGGAATGCACTCTGTATGCCTAAGTCAACCCATGAAATGAGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16847179 CGGCTAGAGGGGCAGGATGCGCAAGTCGGAGATCGGTCGGGTC-CCCCTCTGCGTGCTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGTCACCACTCTGCGTGCTACCGATC
* * * ** * *
16847243 TTGCTGCCACAACCCTC-GATCCGGTCCAATCTTAGACTGGGAATGAACTAGGAATGCCTAAACC
131 CTACTACCACAACCCTCAGATCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCC
* * * * ** * *
16847307 AACCGACTAAACGAGCGGGTGGGCGGGTGGGCACTACGTCGACCAGAGAGACGGGATTCGCAAGT
196 AACCGACGAAACGAGC----AGGCGGGCGAGCACTACGTCGGTCAGAGAGACGGGATGCGCAAGC
* * * **
16847372 CGTGGATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTACGTGTGAATGCCATT
257 CGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
*
16847437 TTTATGGCTTGTAAATTCATCCAATGGTCCCTTAAGCCTT-ACGTGAAGTTTCATGGCAAGACGA
322 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
16847501 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCG
387 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCA
*
16847566 GAAGGAGTTTTGGCCCCAAACCTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
452 GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
16847631 A-TCAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAG
517 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16847695 GCACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
* * *
16847760 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
647 CTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
16847825 TGTGTGCACACCCCCCTCGGCCCACCCGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCG
712 TGTGCGCACACCCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * *
16847890 ATGATGCTTCAGCGATAGTGCCCCGACGAAGAAAA-ATGCCGCACCAGCACATGCCCGAGCCCAG
776 ACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAACATGCAGCACCAGCACATGCCCGAACCCAG
* * * * * *
16847954 CATGTGCAACCGCAACCCTCGGTTCGGTCTGATCCTAGACTGGGAATGAACTCCTTATG
841 CATGTGCTACCGCAAACCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16848013 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
16848077 CGGCCAGAGGGGCGGGATACGTAAATCGAGGATCGGTCAGGTCTCCA-TCTGCGTGCTACTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGTCACCACTCTGCGTGCTACCGATC
* **
16848141 CTACTACCACAACCTTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCC
131 CTACTACCACAACCCTCAGATCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCC
* * * *
16848205 AACCGACGAAATGAGCGGGCGGACGAGCGAGCGGGCACTACATCGGTC-GAGAGACGAGATGCGC
196 AACCGACGAAACGAGCAGGC-G--G-GCGA----GCACTACGTCGGTCAGAGAGACGGGATGCGC
16848269 AAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
253 AAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
* *
16848334 CATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAG
318 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
**
16848399 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
383 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
* * * *
16848464 TTCAGAAGGAGTTTTGGCCCTAAACTTGGTAGACATGGTCCGTGTATTTTTGTTGGCATGCATAA
448 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
16848529 AAAAATTTAGCTAACAACTCGAAGTGTACAAGAGTTTGTGACCATTTGAAAAAAGTGTCCCCATT
513 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
16848594 TCAGACACTTTAATGGCTACTAGCAGCAAACCAGTAAAATCTCAAATGCTCTTT-AAGGGTGTGT
578 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGG-GTGT
* * **
16848658 GAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAATATAA-GG---AGTACTGGCACCCATCGCA
642 GAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
16848719 CATCATGTGCG-ACA--CCCCCAGCCCTCCCGATCGCTGGAACCCCAATGCCGTCGGTCAGGTTC
707 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* *
16848781 TCCAACGATGCTCCAGCGATGGTGCCCCGGTACATGCCCAAGCCCAAGTCTAGCATGCCCAAGCC
772 TCCGACGATGCTCCAGCGATGGTGCCCC-G-AC--G---AAG---AA----A--A----CATG--
* * *
16848846 CAGCATGTGCGGCCCCAGCACATGCCC-AAGCCCAGCATGTGCTACCG-AAATCCTCAGTTCGAT
815 CAGCA---------CCAGCACATGCCCGAA-CCCAGCATGTGCTACCGCAAA-CCTCGGTCCGGT
*
16848909 CCGATCTTAGACTGGGAATGAACTCTGTATG
869 CCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16848940 CTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * *
16849005 TGGCCAGAGGGATGGGATGCGTAAGTCGGGGATCGACCGGGTCACC-CTCTGCATCCTATCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGTCACCACTCTGCGTGCTACCGATC
** * * * * * *
16849069 CTACTACTGCAACCCT-TGGTTCTGTCCAATCTTAGATTGGGAATGAATTTCGTATG-CT-----
131 CTACTACCACAACCCTCAGATCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCC
*
16849127 ------------TA--A-----GC---CA--A---C---CAGAGAGACGGGATGCGCAAG-CGTG
196 AACCGACGAAACGAGCAGGCGGGCGAGCACTACGTCGGTCAGAGAGACGGGATGCGCAAGCCGTG
* * *
16849161 GATCGATAGGGTGGT-GGTGGGTTTAGGCAC-TTTTCATATTT-TGTGTGCCAATGCCATTTTTA
261 GATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
*
16849223 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACGACTCG
326 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* ** * * * *
16849288 TTTTCTATTTTTCACGA-TTTTCAAATCTTTTCACGGTTCGAGATTTTTTAAAATGTTTTCGGAT
391 TTTTCTATTTTTCACGATTTTTGAAA-CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* * *
16849352 GGAGTTTTGGCCCCAAACTTGGTAGACGTGAACCTTGTATTTTTGTTGGCTTGCACAAAAAAATT
455 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
16849417 TAACTAAAGACTCGAAGTGTATAAGATTTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
520 CAGCTAAAAACTCGAAGTGTACAAGA-TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
16849482 ACTTTAATGGCTATTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCT
584 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCT
* *
16849547 CGAGGTTTGATAAGGGATAGGTGGCCAATATAAGGGCCAGGTACCAGCACCCATCGCACATCATG
649 CGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
16849612 GGCGCACACCCCCTCCGGCCCCCCCGATCGCCAGAACCCCAATACCGCCGATCAGGTTCTCCGGC
714 TGCGCACACCCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * *
16849677 AATGCTCCGGTGATGGTGCCCCGACGAAGAAAA-ATGCAGCACCTA-CACATGCCCGAACCCAGC
778 GATGCTCCAGCGATGGTGCCCCGACGAAGAAAACATGCAGCACC-AGCACATGCCCGAACCCAGC
* * *
16849740 ATGTGCTGCCGCAAACCTCGGTCCGGTCCGATCTTAGACTGGGAATCAACTTCGTATG
842 ATGTGCTACCGCAAACCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
16849798 CGTAGATTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGTGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16849863 CGGCCAGAGGGGTGGGATGTGCAAGCCGGGGATGGGCCTGGTC-CCACTCTACGTGCTACCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGTCACCACTCTGCGTGCTACCGATC
* * * * *
16849927 CTGCTGCCACAACCCTCAG-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
131 CTACTACCACAACCCTCAGATCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCC
*
16849991 AACCGACGAAACGAGCAGGCGGGCGAGCACTACGCCGGTCAGAGAGACGGGATGCGCAAGCCGTG
196 AACCGACGAAACGAGCAGGCGGGCGAGCACTACGTCGGTCAGAGAGACGGGATGCGCAAGCCGTG
*
16850056 GATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
261 GATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
* *
16850121 TGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCTTGGCAAGACGACTCG
326 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* *
16850186 TTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCAGAAG
391 TTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAG
* *
16850251 GA-TTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATT
456 GAGTTT-TGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
16850315 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
520 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
16850380 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
585 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTC
* *
16850445 GAGGTTTGATGAA-GGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATA
650 GAGGTTTGAT-AAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * * * *
16850509 TGCGCAGACCCTCCCCCTGACCCCCCCAATCGTCGGAACCCCAATGTCGTCTGTCAGGTTCTCCG
714 TGCGCACA-CC-CCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * *
16850574 ACGATG-----GC-A-----CCCCGACGAAGAAAATATG--GCACCAACACATGCCCGAGCCCAA
776 ACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAACATGCAGCACCAGCACATGCCCGAACCCAG
* * * * * *
16850626 CATGTGCTGCTGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
841 CATGTGCTACCGCAAACCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
16850685 C
1 C
16850686 CTAAGCCAAC
Statistics
Matches: 2293, Mismatches: 265, Indels: 242
0.82 0.09 0.09
Matches are distributed among these distances:
857 2 0.00
858 210 0.09
859 9 0.00
867 5 0.00
869 2 0.00
874 1 0.00
876 2 0.00
878 1 0.00
880 8 0.00
881 211 0.09
882 132 0.06
883 27 0.01
884 19 0.01
885 18 0.01
886 30 0.01
887 77 0.03
888 18 0.01
889 7 0.00
890 62 0.03
891 1 0.00
892 2 0.00
893 1 0.00
894 26 0.01
895 82 0.04
896 20 0.01
897 180 0.08
898 387 0.17
899 91 0.04
901 115 0.05
902 164 0.07
903 147 0.06
905 2 0.00
909 1 0.00
910 1 0.00
911 1 0.00
916 2 0.00
918 4 0.00
926 3 0.00
927 76 0.03
928 146 0.06
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (899 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGTCACCACTCTGCGTGCTACCGATC
CTACTACCACAACCCTCAGATCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCC
AACCGACGAAACGAGCAGGCGGGCGAGCACTACGTCGGTCAGAGAGACGGGATGCGCAAGCCGTG
GATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
TTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAG
GAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCG
AGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
CGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
GCTCCAGCGATGGTGCCCCGACGAAGAAAACATGCAGCACCAGCACATGCCCGAACCCAGCATGT
GCTACCGCAAACCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16852012 original size:26 final size:26
Alignment explanation
Indices: 16851983--16852032 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
16851973 GTCTGATCTT
*
16851983 AGACTGGGAATCAAGTCCGTATGCTG
1 AGACTGGGAATCAACTCCGTATGCTG
*
16852009 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATCAACTCCGTATGC
16852033 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.28, C:0.20, G:0.30, T:0.22
Consensus pattern (26 bp):
AGACTGGGAATCAACTCCGTATGCTG
Found at i:16853511 original size:26 final size:26
Alignment explanation
Indices: 16853475--16853527 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16853465 CCAGTTCGAT
16853475 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16853501 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16853527 C
1 C
16853528 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16855146 original size:723 final size:716
Alignment explanation
Indices: 16853627--16855151 Score: 1941
Period size: 723 Copynumber: 2.1 Consensus size: 716
16853617 CATGCTGTCA
* * *** * * *
16853627 ATCCTGCTACCACAACCCTCAACCTGGTGTGATCTTAGACTGGGAATGAGCTCTGTATGCCTAAG
1 ATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
16853692 CCAACCGACAAAACGAGCGGGTGGGCGGGCGGGCGAGCACTACGCCGGCCAGAAAGACGGGATGC
66 CCAACCGACGAAACGAGCGGGAGGGCGGGCGGGCGAGCACTACGCCGGCCAGAAAGACGGGATGC
* * *
16853757 GCAAGCCGTGGATCGATAGAATGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAAT
131 ACAAGCCGTGGATCGATAGAATGGTAGGTGGGTTTAGGCACATCTTCATATTTCGGCATGCCAAT
* * * *
16853822 GCCTTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACATGAAGTTTCATGGCAA
196 GCCTTTTAATGGCCTGCAAATTCATACAATGGTCCCTTAAACCTTCACATGAAGTTTCATGACAA
* * *
16853887 GACGACTCGTTTTCTATTTTTCACGACTTTCAAAACTTTTTTCGGTTCGGGATTTTTTAAAATTT
261 GACGACTCATTTTCTATTTTTCACGACTTTCAAAACTTTTTGCGGTTCGGGATGTTTTAAAATTT
* *
16853952 TTTCAGATAGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCACA
326 TGTCAGATAGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCACGCACA
* * * *
16854017 AAAATATTCTGCTAAAAACTCGAAGTGTACAAGATTTTGTGACTATTTCAAAAAAAAATGGTCCC
391 AAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-AAAAAAAAATGGTCCC
*
16854082 CATTTCAGACACTTTAATAGCTACTAGCAGCAAACCTGTAAAACTCAAATGCTCTTTAAGGGGGT
455 CATTTCAGACACTTTAATAGCTACTAGCAGCAAACCTGTAAAACTCAAATGCTCTGTAAGGGGGT
* * * *
16854147 GTGAGTTCTTGACGTTTGATGAGGGATAGGGGTCCAATATAAGGGCCAAGTACCAGCACCCATCG
520 GTGAGTTCTTGACGTTTGATGAGCGATAGGGGGCCAACATAAGGGCCAAGTACAAGCACCCATCG
* *
16854212 CATATCATGTAACCACACCCCCCTCGGCCCCCCCGATCACCAAAACCCCAATACCGTCAGTCAGG
585 CACATCATGTAACCACACCCCCCTCGGCCCCCCCGATCACCAAAACCACAATACCGTCAGTCAGG
* * ** *
16854277 TTCTCCGATGATGGTGCCCCGGCGAAGAAAAATGCAGCACCAGCACAATCCCCCTCTTCCTCCTG
650 TGCTCCGATGATGGTGCCCCGGCGAAGAAAAATGCAGCACCAACACAAT-CCCCTCGACCTCCAG
16854342 TCG
714 TCG
* * *
16854345 ATCCTGCTGCCGCAACCCTTGGTCCGGTAC-AATCTTAGACTGGGAATGAACTCCGTATGCCTAA
1 ATCCTGCTGCCGCAACCCTCGGTCTGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
16854409 GCCAACTGACGAAACTAGCGGGCAGGCCGACGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGG
65 GCCAACCGACGAAACGAGCGGG-AGG--G-CGGGCGGGCGAGCACTACGCCGGCCAGAAAGACGG
** ** * *
16854474 GATGCACAAGTTGTGGATCGATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTCGGCGTG
126 GATGCACAAGCCGTGGATCGATAGAATGGTAGGTGGGTTTAGGCACATCTTCATATTTCGGCATG
* * *
16854539 CCAATGCCATTTTAATGGCCTGCAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCA
191 CCAATGCC-TTTTAATGGCCTGCAAATTCATACAATGGTCCCTTAAACCTTCACATGAAGTTTCA
* * * *
16854604 TGACAAGACGAGTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATGTTTTA
255 TGACAAGACGACTCATTTTCTATTTTTCACGACTTTCAAAACTTTTTGCGGTTCGGGATGTTTTA
* **
16854669 AAATTTTGTCGGA-AGGAGTTTTGG-CTCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTTT
320 AAATTTTGTCAGATA-GAGTTTTGGTC-CCAAACTTGGTAGACGTGATCCTTATATTTTTGTTGG
* * *
16854732 CATGCACAAAAAAAATCAGC-CAAAACTTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAA
383 CACGCACAAAAAAAATCAGCTAAAAAC-TCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAA
* * *
16854795 GT-GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTG
447 ATGGTCCCCATTTCAGACACTTTAATAGCTACTAGCAGCAAACCTGTAAAA-CTCAAATGCTCTG
* * *
16854859 TAAGGGGTTGTGAGTTCTTGAGGTTTGATGAGCGATAGGGGGCCAACATAAGGGCCAAGTGCAAG
511 TAAGGGGGTGTGAGTTCTTGACGTTTGATGAGCGATAGGGGGCCAACATAAGGGCCAAGTACAAG
* * * *
16854924 CACCCATCGCACATCATGT-GCGCACACCCCCC-CGG-CCCCTCGATCGCCGAAACCACAATGTC
576 CACCCATCGCACATCATGTAAC-CACACCCCCCTCGGCCCCCCCGATCACCAAAACCACAA--T-
* * *
16854986 GCCGGTCAGGTTCTCCGCTGATGCTCCGATGATGGTGCCCCGGTGAAGAAAAATGCCA-CACCAA
637 ACC-GTCA-G---TCAG--G-TGCTCCGATGATGGTGCCCCGGCGAAGAAAAATG-CAGCACCAA
* * * *
16855050 C-CCAT-GCC-GGAGC-CCAG-C-
693 CACAATCCCCTCGACCTCCAGTCG
*
16855068 AT-GTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTTAA
1 ATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC-TAA
* *
16855132 GTCAACCCACGAAACGAGCG
65 GCCAACCGACGAAACGAGCG
16855152 TGCGGGTGCT
Statistics
Matches: 693, Mismatches: 89, Indels: 45
0.84 0.11 0.05
Matches are distributed among these distances:
718 71 0.10
719 21 0.03
720 50 0.07
721 108 0.16
722 158 0.23
723 230 0.33
724 2 0.00
725 3 0.00
726 1 0.00
727 5 0.01
729 4 0.01
730 38 0.05
731 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (716 bp):
ATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
CCAACCGACGAAACGAGCGGGAGGGCGGGCGGGCGAGCACTACGCCGGCCAGAAAGACGGGATGC
ACAAGCCGTGGATCGATAGAATGGTAGGTGGGTTTAGGCACATCTTCATATTTCGGCATGCCAAT
GCCTTTTAATGGCCTGCAAATTCATACAATGGTCCCTTAAACCTTCACATGAAGTTTCATGACAA
GACGACTCATTTTCTATTTTTCACGACTTTCAAAACTTTTTGCGGTTCGGGATGTTTTAAAATTT
TGTCAGATAGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCACGCACA
AAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAAATGGTCCCC
ATTTCAGACACTTTAATAGCTACTAGCAGCAAACCTGTAAAACTCAAATGCTCTGTAAGGGGGTG
TGAGTTCTTGACGTTTGATGAGCGATAGGGGGCCAACATAAGGGCCAAGTACAAGCACCCATCGC
ACATCATGTAACCACACCCCCCTCGGCCCCCCCGATCACCAAAACCACAATACCGTCAGTCAGGT
GCTCCGATGATGGTGCCCCGGCGAAGAAAAATGCAGCACCAACACAATCCCCTCGACCTCCAGTC
G
Found at i:16857789 original size:26 final size:26
Alignment explanation
Indices: 16857753--16857805 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16857743 CTGGTCTGAT
* *
16857753 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTACGTATG
16857779 CTTAGACTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
16857805 C
1 C
16857806 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:16858316 original size:894 final size:895
Alignment explanation
Indices: 16854343--16859140 Score: 5787
Period size: 871 Copynumber: 5.3 Consensus size: 895
16854333 TTCCTCCTGT
* * *
16854343 CGATCCTGCTGCCGCAACCCTTGGTCCGGTACAATCTTAGACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
16854408 AGCCAACTGACGAAACTAGCGGGCAGGCCGACGGGCGGGCGAGCACTACGTCGGCCAGAGAGACG
66 AGCCAACCGACGAAAC-A--GTG-A----G-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* ** * * *
16854473 GGATGCACAAGTTGTGGATCGATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTCGGCGT
122 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* * * *
16854538 GCCAATGCCATTTTAATGGCCTGCAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTC
187 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * * * *
16854603 ATGACAAGACGAGTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATGTTTT
252 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACTTTTTACGGTTCGGGATTTTTT
* * * **
16854668 AAAATTTTGTCGGAAGGAGTTTTGGCTCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTTTC
317 AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* *
16854733 ATGCACAAAAAAAATCAGC-CAAAACTTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
382 ATGCACAAAAAAATTCAGCTAAAAAC-TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
*
16854797 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTGTAA
446 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * * * *
16854862 GGGGTTGTGAGTTCTTGAGGTTTGATGAGCGATAGGGGGCCAACATAAGGGCCAAGTGCAAGCAC
511 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * *
16854927 CCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCTCGATCGCCGAAACCACAATGTCGCCGG
576 CCATCGCACATCATGTGTGCACA--CCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGG
* ** * *
16854991 TCAGGTTCTCC-GCTGATGCTCCGATGATGGTGCCCCGGTGAAGAAAAATGCCACACCAACCCAT
639 TCAGGTTCTCCGGC-GATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACAT
* *
16855055 GCCGGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAAC-T
703 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTT
*
16855119 C----C---G--T----ATG--C-C---T---TAAGTCAACCCACGAAACGAGCGTGCGGGTGCT
768 CGATGCTTAGACTGGGAATGAACTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
** * * ** *
16855162 CAATCGGCCAGAGGGGCGAGATGCGCAAGCCGACGATCGTTCGGGTCCCCCTCTT-CGTGCTAC
833 CAGCCGGCCAGAGGGGCAAGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCT-TTGCGTGCTAC
** * * * *
16855225 CGATCCTGCTGCCGCAACCCTCGGTCTGGTCCGGTCTTAGATTGGGATTGAACTCTGTAAGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
16855290 AGCCAACCGACGAAAGTAGCGGGCGTGCCGACGGGCGGGTGAGCATTACGCCGGCCAGAAAGACG
66 AGCCAACCGACGAAA-CAGTGAGCG-G--G-CGGGC--G-G-GCACTACGCCGGCCAGAGAGACG
* * * * * *
16855355 TGATACGCAAGTCGTGGATCGATAGGGTGGTACGTGGGTTTAGGCACATCTTCATATTTCTACGT
122 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* *
16855420 GCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTC
187 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * *
16855485 ATGGCAAGACGAGTCATTTCCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGA-TTTTT
252 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACTTTTTACGGTTCGGGATTTTTT
* * **
16855549 AAAATTTTGTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTTTC
317 AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
16855614 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
382 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * *
16855679 TGCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCACTTTAA-
447 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
16855743 GGGGTGGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
512 GGGGT-GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * ** * * * *
16855808 CCATCACACATCACGTGTGCACACCCCCCGG-CCCCCCGATCATCGAAAACCCATTGCCGCCGGC
576 CCATCGCACATCATGTGTGCACA-CCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGT
* ** *
16855872 CAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGC
640 CAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGC
* *
16855937 CCGAGCCCAGCATGTGCTACCGCAA--C-C---CT--TC--ATC-----C-----A-G-TC-T-G
705 CCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTTCG
* * * * *
16855978 AT-CTTAGACTGGGAATCAACTCCGTATGCCTAAATGAACCCACGAAACGAGCGTACGGGCACTC
770 ATGCTTAGACTGGGAATGAACT-CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* ** * * **
16856042 AGCCGCCCAGAGGGGCGGGATGTGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGT
834 AGCCGGCCAGAGGGGCAAGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTTTGCGTGCTAC
* * ** *
16856104 CGATCCTGCTACCGCAACCCTCAGTCTGGTCCAATCTTAGACTCTGAATGAACTCCGTATGCATA
1 CGATCCTGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * **
16856169 AGCCAACCGACGAAACGAGTGGGCGGGCGGGAGGGCACTACGCCGGCCAGAGAGACGGGATGAAC
66 AGCCAACCGACGAAAC-AGTGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* *
16856234 AAACCGTGGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAATGC
130 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
*
16856299 CATTTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
195 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * *
16856364 ACGACTCGTTTTTTATTTTTCACGATTTTTG-AAACTTTTTACGGTT-TGGATTTTTTAAAATTT
260 ACGACTCGTTTTCTATTTTTCATGA-TTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * * * *
16856427 TTTCAGACGGAGTTTTGGCCCCAACCTTGGTGGACTTGA-CCATTGTATTTTTGTCGGCATGCAC
324 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCAC
* * * * *
16856491 AAAAAAATTCAGCTAAAAACACGAAGTGTACAAGATTCTGTGACCCTTTGAAAAAAGTTTGCCCA
388 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
*
16856556 TTTCAGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
453 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * * *
16856621 TGAGTTCTCAAGGTTTGATGAGGGATAGAGGGCCAATATAAAGGCCAAATACCAGCACCCATCGC
518 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
16856686 ACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCAGTCAGGTT
583 ACATCATGTGTGCACA--CCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * *
16856751 CTCCGACGATGCTCCGACGATGGTGCCTCGGTGAAGAAAAATGTGGTACCAGCACATGCTCGAGC
646 CTCCGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * * * *
16856816 CCAGCATCTGCTGCCGCAACCCTCGGTCTGCTCCGATCTTAGACT-GGAATGAACTCCAAACGCT
711 CCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTTC-GATGCT
* *
16856880 TAGACTGGGAATGAACTCGATATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGC-CTAGTC
775 TAGACTGGGAATGAACTCG-TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC-AGCC
* ** * *
16856944 GGCCAGAGGGGC-AGAATGCGCAAGCCGGGGATCGACCGGGTTCCCCTTTGCGTGCTGC
838 GGCCAGAGGGGCAAG-ATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTTTGCGTGCTAC
* * ** ***
16857002 CGATCCTGCTGCTGCAACCTTCGGT-TCAATTTGATCTTAGACTGGGAATGAACTCCGTATGCCT
1 CGATCCTGCTGCCGCAACCCTCGGTCT-GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
16857066 AAGCCAACCGATGAAACGAGTGGGCGGGCGGGCGGGTGGGCACTACACCGGCCAGTGAGACAGGA
65 AAGCCAACCGACGAAAC-AGTGAGCGGGCGGGC----GGGCACTACGCCGGCCAGAGAGACGGGA
16857131 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
125 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
*
16857196 AATGCCATTTTTTTGG-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
190 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* *
16857260 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG-AAACTTTTTAAGGTTTGGGATTTTTTAA
255 GCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTGAAAACTTTTTACGGTTCGGGATTTTTTAA
* * *
16857324 AATTTTTTTGGAAGGAGTATTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGTTGGCAT
319 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
16857389 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
384 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
16857454 CCCATTTCAGACACTTTAATGCCTACTGGCAACAAACCTGTAAAATCTAAAATGCTCTTTAAGGG
449 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
16857519 GGTGTGAGTTCTTGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCA
514 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* ** *
16857584 TCGCACATCATCTGTGCACACCCCTTGCCCCCCCTGAT-GCCGGAACCCCAATGCCACCGGTCAG
579 TCGCACATCATGTGTGCACACCCCCGGCCCCCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAG
* * * * **
16857648 GTTCTCCGGCAATGCTCCGGCGATGGTGTCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
643 GTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * *
16857713 AGCCTAGCATGTGCTACCGTAACCCTCAGTCTGGTCTGATCTTAGATTGGGAATGAACTTCGTAT
708 AGCCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTTCG-AT
* *
16857778 GCTTAGACTGGGAATGAACTACGTATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGCGCTCAG
772 GCTTAGACTGGGAATGAACT-CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
16857843 CCTGCCAGAGGGGCAAGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTTTGCATGCTAT
836 CCGGCCAGAGGGGCAAGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTTTGCGTGCTAC
* * * *
16857903 CGATCCTGCTGCTGCATCGCTCGGTCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTA
*
16857968 AGCCAACCGACG-AA-A-TGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
66 AGCCAACCGACGAAACAGTGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * **
16858030 AGCCGTAGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAAGCCAATGAT
131 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
16858095 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
196 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
16858160 CGACTCGTTTTCTATTTTTCAAGAATTTTCAAAA-TTTTTATGGTTCGGGATTTTTTAAAATTTT
261 CGACTCGTTTTCTATTTTTCATG-ATTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * * * *
16858224 TTCGGAAGGAGTTTTGGCCCAAAACTTGGTGGACGTGATTCTTGCATTTGTGTTGGCATGCACAA
325 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
16858289 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTATGTGACCATTTGAAAAAAGTGTCCCCATT
390 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * *
16858354 TTAGACACTTTAATGGCAAATAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
455 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
16858419 AGTTCTCGAGGTTTGTTGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCAC
520 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
16858484 ATCATGTGTGCACACCCCCGTCAGGCCCCCCCGATCGTCGGAACCCCTATGCCGCCGATCAGGTT
585 ATCATGTGTGCACA-CCCC--C-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* * * *
16858549 CTCCGGTGATGCTCCGACGATGGTACCCCGGTGAAGAAAAATGCGGCACCAGCAAATGCCCAAGC
646 CTCCGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * *
16858614 CTAGCTTGTGCTGCCGCAATCCTTAGTCCT-GTCTGATCTTAGACTGGGAATGAACTCCGTATGC
711 CCAGCATGTGCTGCCGCAACCCTCAGT-CTGGTCTGATCTTAGACTGGGAATGAACTTCG-ATGC
* *
16858678 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTTAGCC
774 TTAGACTGGGAATGAACT-CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
**
16858743 AACCAGAGGGGCAGGATGCGTAAGCCGAGGATCAGCCAAGTCCCCCTCTACATTTTGTCGGGGAT
838 GGCCAGA---G--GG--GC---A----A-GAT--G-C--G-------C-A-A----GTCGGGGAT
* * * * *
16858808 TGGCCAGGTCCCCCTTTACGTGGTAC
870 CGGTCGGGTCCCCCTTTGCGTGCTAC
* * * ** *
16858834 CGATCCTGCTACTGTAACCCTCGGT-TCGGTCTGATCTTATACTGGGAATGAACTCCGTATGCCT
1 CGATCCTGCTGCCGCAACCCTCGGTCT-GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * * *
16858898 ATGCCAACCGATGAAACGAGCGGGTGAGCAGGCGGGTGGGCACTACGCCAGCCAAACAGACGGGA
65 AAGCCAACCGACGAAAC-A----GTGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
** * * *
16858963 TAAGCAAGCCATGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCC
125 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
16859028 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
190 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* *
16859093 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTAAAAACTTTTTACG
255 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACTTTTTACG
16859141 ATTTTCAAAT
Statistics
Matches: 3395, Mismatches: 385, Indels: 215
0.85 0.10 0.05
Matches are distributed among these distances:
858 2 0.00
859 1 0.00
860 2 0.00
863 1 0.00
865 2 0.00
869 2 0.00
870 8 0.00
871 436 0.13
872 20 0.01
873 106 0.03
874 4 0.00
875 7 0.00
876 3 0.00
877 2 0.00
878 8 0.00
879 155 0.05
880 117 0.03
881 263 0.08
882 273 0.08
883 3 0.00
888 1 0.00
892 1 0.00
893 100 0.03
894 361 0.11
895 8 0.00
897 21 0.01
898 390 0.11
899 2 0.00
900 133 0.04
901 280 0.08
902 371 0.11
903 4 0.00
905 2 0.00
908 1 0.00
912 1 0.00
913 3 0.00
915 1 0.00
916 1 0.00
925 1 0.00
926 1 0.00
927 1 0.00
930 1 0.00
931 93 0.03
932 2 0.00
934 1 0.00
938 9 0.00
939 190 0.06
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
CGATCCTGCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTA
AGCCAACCGACGAAACAGTGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
CGACTCGTTTTCTATTTTTCATGATTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
TCATGTGTGCACACCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
GCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
ATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTTCGATGCTTAGACT
GGGAATGAACTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
GGGCAAGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTTTGCGTGCTAC
Found at i:16858687 original size:26 final size:26
Alignment explanation
Indices: 16858651--16858703 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16858641 CCTGTCTGAT
16858651 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16858677 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16858703 C
1 C
16858704 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16859447 original size:331 final size:327
Alignment explanation
Indices: 16858849--16859474 Score: 1000
Period size: 331 Copynumber: 1.9 Consensus size: 327
16858839 CTGCTACTGT
* * * * *
16858849 AACCCTCGGTTCGGTCTGATCTTATACTGGGAATGAACTCCGTATGCCTATGCCAACCGATGAAA
1 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAA
* *
16858914 CGAGCGGGTGAGCAGGCGGGTGGGCACTACGCCAGCCAAACAGACGGGATAAGCAAGCCATGGAT
66 CGAGCGGGCGAGCAGGCGGGGGGGCACTACGCCAGCCAAACAGACGGGATAAGCAAGCCATGGAT
* *
16858979 CGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGG
131 CGATAGAGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
16859044 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
196 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
*
16859109 TCTATTTTTCACGATTTTAAAAACTTTTTACGATTTTCAAATGCCCAAGCCCAGCATTTGCTGCC
261 TCTATTTTTCACAATTTTAAAAACTTTTTACGATTTTCAAATGCCCAAGCCCAGCATTTGCTGCC
16859174 GC
326 GC
*
16859176 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGGAA
1 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAA
* * * * * * * **
16859241 CGAGCGGGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCAT
66 CGAGCGGGCGAGCAGGC-GG-GGG-G-GCACTACGCCAGCCAAACAGACGGGATAAGCAAGCCAT
*
16859306 GGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
127 GGATCGATAGAGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
16859371 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
192 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* **
16859436 GTTTTCTATTTTTGACAATTTTTCAAACTTTTTACGATT
257 GTTTTCTATTTTTCACAATTTTAAAAACTTTTTACGATT
16859475 CAGGATTTTT
Statistics
Matches: 271, Mismatches: 24, Indels: 4
0.91 0.08 0.01
Matches are distributed among these distances:
327 73 0.27
328 2 0.01
329 2 0.01
330 1 0.00
331 193 0.71
ACGTcount: A:0.24, C:0.23, G:0.25, T:0.28
Consensus pattern (327 bp):
AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAA
CGAGCGGGCGAGCAGGCGGGGGGGCACTACGCCAGCCAAACAGACGGGATAAGCAAGCCATGGAT
CGATAGAGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
TCTATTTTTCACAATTTTAAAAACTTTTTACGATTTTCAAATGCCCAAGCCCAGCATTTGCTGCC
GC
Found at i:16859899 original size:26 final size:26
Alignment explanation
Indices: 16859870--16859922 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16859860 CTGGTCCGAT
* *
16859870 CTTAGACTGGGAGTGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16859896 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16859922 C
1 C
16859923 CTAACTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.17, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16860795 original size:26 final size:26
Alignment explanation
Indices: 16860759--16860811 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16860749 CCGGTCTGAT
16860759 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
16860785 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
16860811 C
1 C
16860812 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:16861679 original size:26 final size:26
Alignment explanation
Indices: 16861650--16861702 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16861640 TCGGTCTGAT
*
16861650 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
16861676 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
16861702 C
1 C
16861703 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCGTATG
Found at i:16863123 original size:888 final size:886
Alignment explanation
Indices: 16859817--16864153 Score: 5554
Period size: 887 Copynumber: 4.9 Consensus size: 886
16859807 GTCAGGTTCC
* * * *
16859817 CCAGCA-ATGCCCGAGCCCAGAATGTGCTGGC-ACAACCCTCGGTCTGGTCCGATCTTAGACTGG
1 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGA-AACCCTCAGTCCGGTCCGATCTTAGACTGG
* * *
16859880 GAGTGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAACTCAACCCACGAAACAAG
65 GAATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * *
16859945 TGTGTGGGCGCTCAGTCGGCCAGAGGAGCGGGATGCGCAAGCC-GAGGATTGGCCGGGTCCCCCT
130 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGATCGGCCGGGTCCCCCT
* * ** * * *
16860009 CTGCGTGCTGCCAATCCTGCTGCCACAACCCTCTGTCTGGTCCAATCTTAGACTGGGAATGAACT
194 CTGCGTGCTGCCGATCCTGCTACTGCAACCCTCAGTCCGGTCCAATCTTAGACTGGAAATGAACT
* ** * **
16860074 CTGTATGCCTAAGCCAGTCGACGAAACGA----GCGGGCGGGCACTACGTCGGCCAAAGAGATGG
259 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACAG
* * *
16860135 GATGCGCAAGCCGTGGATCGATAGGATGGTAGGTGGGTTTAGGTACATCTTCATATTTCTACGTG
324 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTG
* * *
16860200 CCAATGCCATTTTTATGGCTTTTAAGTTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCA
389 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * * *
16860265 TGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT-GGGTTTGGGATTTTTTA
454 TGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAGATTTTTTA
* * *
16860329 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCA
518 AAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCA
** * * * *
16860394 TGCATGAAACAATTCAGCTAAAACCTTGAAGTGTACATGATTTTGTGACCATTTGAAAAAAGTGT
583 TGCACAAAAAAATTCAGCTAAAAAC-TCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* **
16860459 CCTCATTTCAGACACTTTAATCTCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
647 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * *
16860524 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCGAATATAAGGGCCAAGTACTAGCACCC
712 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* *** *
16860589 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAAAATCGTCGATCA
777 ATCACACATCATGTGCGCACA-----C--CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* * *
16860654 GGTTCTCCGACGATGCTCCGGTGATGGTGGCTCGACGAAGAAAAATGCAGCA
835 GGTTCTCCGACGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCA
* * * * * * *
16860706 CCAGCACATGCCCAAG-CCAGCATGTGCTACCGTAACCATCAGACCGGTCTGATCTTACACTGGG
1 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGAAACCCTCAGTCCGGTCCGATCTTAGACTGGG
* * * *
16860770 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACCAAACGAAC
66 AATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * ** * *
16860835 GTACGGGCGCTCAACCGGCCAGAGGGGTGGGATGCATAAGCCAGGGATCGACCAGGTCCCCCGT-
131 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCC-TC
* ** * * * *
16860899 TGCGTGCTGTCGATCCTGCTACCACAACCCTCAGTCAGATTCGATCTTAGACT-GAGAATGAACT
195 TGCGTGCTGCCGATCCTGCTACTGCAACCCTCAGTCCGGTCCAATCTTAGACTGGA-AATGAACT
* * *
16860963 TCATATGCCTAAGCCAACCGATGAAACGAGCATGCGGGTGGGCGGGCGGGCACTACGTCGGCCAG
259 CCGTATGCCTAAGCCAACCGACGAAAC--G-A-GC----GGGCGGGCGGGCACTACGTCGGCCAG
*
16861028 GGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
316 AGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
16861093 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTG
381 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
16861158 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAG
446 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGAG
* * * * * *
16861223 ATTTTTTAAAATTCTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTCGCCGTGATCCTTATTTTTT
510 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTT
*
16861288 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAA
575 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC-AAGTGTACAAGATTTTGTGACCATTTGAA
* * *
16861353 AAAAGGGTCCCCA-TTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGGT
639 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
16861417 CTTTAAGGGGATGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCACTGTAAGGGCCAAGTAC
704 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * *
16861481 CAGCACCCAACACACATCATGTGCGAACATCCCCCGACCCCCCCGATCGTCCGGAACCCCAATGT
769 CAGCACCCATCACACATCATGTGCG--CA---CAC--CCCCCCCGATCGT-CGGAACCCCAATGC
* * **
16861546 CGTCGGTCAGG---T-------T-CTCCGGCGATGGTACCCCGACGAAGAAAAATATGGCA
826 CGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCA
* * * * * *
16861596 CCAGCACATGCTCGAGCCCAGCATGTGCTACCGCAACCCTC-GATTCGGTCTGATCTTAGATTGG
1 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGAAACCCTCAG-TCCGGTCCGATCTTAGACTGG
*
16861660 GAATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAG
65 GAATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * *
16861725 TGTGCGGGCACTCAGCCTGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCCC
130 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTC
* * * ** ** *
16861790 TGCGTGCTGTCGATCCTGCTGCTGTAACCCTTGGTTTGGTCCAATCTTAGACTGGGAATGAACTC
195 TGCGTGCTGCCGATCCTGCTACTGCAACCCTCAGTCCGGTCCAATCTTAGACTGGAAATGAACTC
* * *
16861855 CGTATGCCTAAGCCAACCAACGAAACAAGCGGGCGGGCGGGCGGGCTCTACGTCGGCCAGAGAGA
260 CGTATGCCTAAGCCAACCGACG--A-AA-CGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGA
* * *
16861920 CAGGATGCGCAAGGCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAC
321 CAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
16861985 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTCACGTGAAGTT
386 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * * *
16862050 TCTTGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAATACTTTTTGCGGTTCGGGATTTT
451 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTGAA-ACTTTTTACGGTTCGAGATTTT
** * * * **
16862115 TTAAAATTTTTTCAGAAGGTGTTTTGGTCCGAAACTTGGTAGATTTGATCCTTGTATTTTTGTTG
515 TTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTG
* * *
16862180 GTATGCACAAAAAAATTCAGCTAAAAAGTCAAGGTGTACAAGATTTTGTGACCATTTAAAAAAAG
580 GCATGCACAAAAAAATTCAGCTAAAAACTCAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
16862245 TGTCCCCACTTCAGACACTTTAATGGCTACTGGCAGCAAACCCGTAAAATCTCAAATGCTCTTTA
644 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
16862310 AGGGGTTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCA
709 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * *
16862375 CCCATCGCACATCATGTGTGCACA-CCCCCCCAATCATCGGAACCCCAATGCCGTCGGTCAGGAT
774 CCCATCACACATCATGTGCGCACACCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTT
*
16862439 CTCCGACGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATGCGGCA
839 CTCCGACGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCA
* * *
16862487 CCAGCACATGCCCGAGCCCAGCATGTGCTGTCGAAACCCTCAATTCCGATCCGATCTTAGACTGG
1 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGAAACCCTC-AGTCCGGTCCGATCTTAGACTGG
* * * **
16862552 GAAGGAACTTTGTATGCTTGGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAATAG
65 GAATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * * * *
16862617 CGTGCAGACGCTTAGCGGGCCAGAAGGG-GGGATGCGCAAGTCAGGGATCGACCGGGTCCCCCTC
130 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTC
* * * * **
16862681 TGTGTGCTGCCAATCCTGCTACTGCAACCTTCGGTCCGGTCTGATCTTAGACTGGAAATGAACTC
195 TGCGTGCTGCCGATCCTGCTACTGCAACCCTCAGTCCGGTCCAATCTTAGACTGGAAATGAACTC
* * * *
16862746 CGTATGCCTGAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACG-CTGGCTAGTGAGACGG
260 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTC-GGCCAGAGAGACAG
* * * *
16862810 GATGCGCAAGCCGTGGATCAATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTTTGCATG
324 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTG
* * * *
16862875 CCAGTCCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTAAAGTTTCA
389 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * *
16862940 TGGCAAGACGACTCGTTTTCTCTTTTTCATGATTTTGGAAACTTTTTACGGTTCAAGATTTTTTA
454 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTTTT-
*
16863005 AAAATTTTTTTGGAAGGAGTTTTGGCCCAAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGC
517 AAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGC
* *
16863070 ATGCACAAAAAAATTCAGCCAAAAGCTCAAGGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
582 ATGCACAAAAAAATTCAGCTAAAAACTCAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
** *
16863135 TCCCCATTTCAGACACTTTAATGGCTTTTGGCAGCAAACCTGTAAAATCTCAAATCCTCTTTAAG
646 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
*
16863200 GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
711 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * **
16863265 CATCACACATCATGTGTGCACACCCCCCGGCCCCCCGATCGTCCGAACCCCGATGCCACCGGTCA
776 CATCACACATCATGTGCGCACA----CC--CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* *
16863330 GGTTCTCCGACGATGGTTCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCA
835 GGTTCTCCGACGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCA
* * * * * *
16863382 CCAGCACATGCCCGAGCCCAACATGTGCTGTCGCAACCCTCGGTCCTGTCCGATCTTAGACTAGG
1 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGAAACCCTCAGTCCGGTCCGATCTTAGACTGGG
* ** * * * *
16863447 AATCAACTCCATATGCTTATACTGAGAATGAACTCCGTATGCCTAACTCAACCCACGAAACGAGC
66 AATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * ** *
16863512 GTGCGGGCGTTCAGCCAGCCAGAGGGGCGGGATGCATAAGCCAGGGATCGGCTGGGTCCCCCTCT
131 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTCT
* * * *
16863577 GCGTGCTACCGATCCTACTA-TCGTAACCCTCAGTCCAGTCCAATCTTAGACTAGG-AATGAACT
196 GCGTGCTGCCGATCCTGCTACT-GCAACCCTCAGTCCGGTCCAATCTTAGACT-GGAAATGAACT
* * * * *
16863640 CCGTATGCCTAAGCCAACTGACGAAATGAGCGGACGGGCGGACGGGTGGGCACTATGTCAGCCAG
259 CCGTATGCCTAAGCCAACCGACG-AA--A-C-GA---GCGGGCGGGCGGGCACTACGTCGGCCAG
*
16863705 AGAGACAGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
316 AGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
16863770 TTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
381 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * *
16863835 AAGTTTCATGGCAAGATGACTCGTTTTCTATGTTTCACGATTTTTAAAATTTTTGCGGTTCGAGA
446 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTGAAACTTTTTACGGTTCGAGA
* * * ** *
16863900 TTTTTTAAAA-TTTTTTCGAAGGATTTTTTGCCCCAAACACGGTAGACATGATCCTTATATTTTT
511 TTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTT
* * * *
16863964 CTTGGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACTATTTGACA
576 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTC-AAGTGTACAAGATTTTGTGACCATTTGAAA
* *
16864029 AAAGTG-CCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGATC
640 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* **
16864093 TTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGATCCAATATAAGGG-CAAGT
705 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
16864154 GTCACGGGCT
Statistics
Matches: 3000, Mismatches: 375, Indels: 137
0.85 0.11 0.04
Matches are distributed among these distances:
880 24 0.01
881 11 0.00
883 1 0.00
884 1 0.00
886 9 0.00
887 532 0.18
888 353 0.12
889 267 0.09
890 56 0.02
891 398 0.13
892 98 0.03
893 3 0.00
894 95 0.03
895 218 0.07
896 4 0.00
898 7 0.00
899 106 0.04
900 169 0.06
901 310 0.10
902 156 0.05
903 180 0.06
904 1 0.00
905 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (886 bp):
CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGAAACCCTCAGTCCGGTCCGATCTTAGACTGGG
AATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTCT
GCGTGCTGCCGATCCTGCTACTGCAACCCTCAGTCCGGTCCAATCTTAGACTGGAAATGAACTCC
GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACAGGA
TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
GCAAGACGACTCGTTTTCTATTTTTCACGATTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAA
TTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGC
ACAAAAAAATTCAGCTAAAAACTCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
CACATCATGTGCGCACACCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
GATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCA
Found at i:16869073 original size:21 final size:21
Alignment explanation
Indices: 16869060--16869102 Score: 86
Period size: 21 Copynumber: 2.0 Consensus size: 21
16869050 CTCCATCCGC
16869060 TGGCGCATGGCCTCCATGCCA
1 TGGCGCATGGCCTCCATGCCA
16869081 TGGCGCATGGCCTCCATGCCA
1 TGGCGCATGGCCTCCATGCCA
16869102 T
1 T
16869103 CTCGCAAAGT
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 22 1.00
ACGTcount: A:0.14, C:0.37, G:0.28, T:0.21
Consensus pattern (21 bp):
TGGCGCATGGCCTCCATGCCA
Found at i:16869108 original size:21 final size:21
Alignment explanation
Indices: 16869062--16869108 Score: 76
Period size: 21 Copynumber: 2.2 Consensus size: 21
16869052 CCATCCGCTG
*
16869062 GCGCATGGCCTCCATGCCATG
1 GCGCATGGCCTCCATGCCATC
16869083 GCGCATGGCCTCCATGCCATC
1 GCGCATGGCCTCCATGCCATC
*
16869104 TCGCA
1 GCGCA
16869109 AAGTCAGAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
21 24 1.00
ACGTcount: A:0.15, C:0.40, G:0.26, T:0.19
Consensus pattern (21 bp):
GCGCATGGCCTCCATGCCATC
Found at i:16870303 original size:26 final size:26
Alignment explanation
Indices: 16870267--16870319 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16870257 CCAGTCCAAT
16870267 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16870293 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16870319 C
1 C
16870320 CTAAGTCAAT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16871468 original size:185 final size:185
Alignment explanation
Indices: 16871156--16871526 Score: 546
Period size: 185 Copynumber: 2.0 Consensus size: 185
16871146 CTGGTTCGAT
** *
16871156 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACCCAGC
* * * * *
16871221 CGGCCAGATGGGCGGGATGCGGAAGCCGGGGATCGACTGGGTCCCCCTCTGTGTGTTGCTGATCC
66 CGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCACTGTGTGCTGCTGATCC
* * * * *
16871286 TACTACCGCAAACTTTGATCTGGTCCGATCTTATATTGGGAATGAACTCCGTATG
131 TACTACCGCAAACCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
**
16871341 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGTGCCCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACCCAGC
* *
16871406 CGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCG-GTCGGTTCCCCCACTGTGTGCTGCTGATC
66 CGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACT-GGGTCCCCCACTGTGTGCTGCTGATC
* * *
16871470 CTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
130 CTACTACCGCAAACCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
16871526 C
1 C
16871527 CTAATCCAAC
Statistics
Matches: 165, Mismatches: 20, Indels: 2
0.88 0.11 0.01
Matches are distributed among these distances:
184 1 0.01
185 164 0.99
ACGTcount: A:0.21, C:0.28, G:0.29, T:0.21
Consensus pattern (185 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACCCAGC
CGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCACTGTGTGCTGCTGATCC
TACTACCGCAAACCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16872235 original size:26 final size:26
Alignment explanation
Indices: 16872206--16872258 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16872196 TCGGTCCGAT
*
16872206 CTTAGACTGGGACTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
16872232 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16872258 C
1 C
16872259 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.19, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Done.