Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 109 of 190
Found at i:17013808 original size:26 final size:26
Alignment explanation
Indices: 17013779--17013834 Score: 112
Period size: 26 Copynumber: 2.2 Consensus size: 26
17013769 CCGGTTTGAA
17013779 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
17013805 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
17013831 CTTA
1 CTTA
17013835 AGTCAACCCA
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 30 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:17014711 original size:26 final size:26
Alignment explanation
Indices: 17014682--17014732 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
17014672 GCAGTCCGAT
*
17014682 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATAAACTCCGTATG
*
17014708 CTTAGACTGGGAATAAACTCCGTAT
1 CTTAGACTAGGAATAAACTCCGTAT
17014733 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.20, G:0.22, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAATAAACTCCGTATG
Found at i:17015117 original size:904 final size:896
Alignment explanation
Indices: 17013379--17021811 Score: 6860
Period size: 906 Copynumber: 9.5 Consensus size: 896
17013369 GACGACGGAG
* *
17013379 TTTTGGCCCCAAACTTTGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGT
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* *
17013444 TAAAAACTCGAAGTGTACAAGATTTTCTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
17013509 AATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTGTTTAAAGGGGTGTGAGTTCTCGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
17013574 TTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTACGC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * *
17013639 ACA-CCCCCCGACCCCCGGATCGTCGAAACCCCA--ATGCCGTC-GG---T-C-AGGTTCTCTGG
261 ACACCCCCCCGGCCCCCCGATCGTCGAAACCCCATGCTGCCGTCAGGTTCTCCGAGATGCTCTGG
* ** * *
17013695 CGATGGTGCCCCGAC-AAAAAAAATATGGCACCAGCACATGCTCGAGCCCAGGATGTGCTACCGC
326 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCA-GATATGCT-GCGC
* * *
17013759 AACCCTCGGTCCGGTTTGAACTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
389 AACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * *
17013824 CCGTATGCTTAAGTCAACCCATGAAACGAGCGTCCGGGCGCTCAGTCGGCCAGCGGGGTGGGATG
454 CCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG-CAGCCAGAGGGGCGGGATG
* * * * * * * * *
17013889 CGTAAGCCGAGGATCGACTGGGTCCCCCTCTACGTGCTGTCGATCCTACTACCATAACCCTCGAT
518 CATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCACAACCCTCGGT
* * *
17013954 CTGTTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAATGAGCGAGCA
583 CTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACGAGCGAGCA
* *
17014019 AGCGGGCGGGCGGGCACTACGTCGGCCAGAAAGACGGGATGCACAAGCCGTGGATCGATAGGGTG
648 GGCGGGCGGGCGGGCACTACGTCGGCCAGAAAGA-GAGATGCACAAGCCGTGGATCGATAGGGTG
* *
17014084 GTAGGTGGGTTTAGGCATATCTTCATATTTCTGCATGCTAATGCCATTTTTATGGCTTGTAAATT
712 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * * *
17014149 CATACAATACTCCTTTAAGCCTTCAAGTGAAGTTTCATGGCAAAACGACTCATTTTCTATTTTTC
777 CATACAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* ** **
17014214 ATGATTTTTGAAATTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGGATA-GAT
842 ATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGA-AGGAT
* * *
17014269 TTTTTGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTCGCATGCACAAAAAAATTCAAC
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* * * *
17014334 TAAAAACTCAAAGTGTAGAAAATTTTGTGACCATTTGAAAAAATTGTTCCCATTTCAGACACTTT
66 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
17014399 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
17014464 TTTGGTGAGGGATAGTGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
*
17014529 ACA-CCCCCCGGCCCCCTCGATCGTCGAAAACCCATTGCTGCCAGTCAGGTTCTCCGACGATGCT
261 ACACCCCCCCGGCCCCC-CGATCGTCGAAACCCCA-TGCTGCC-GTCAGGTTCTCCGA-GATGCT
*
17014593 CTGGCGATGCTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATATGCTG
322 CTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAG-ATATGCTG
* * * * *
17014658 TCGCAACCCTCGATGCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATA
386 -CGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * *
17014723 AACTCCGTATACCTAAGTCAACCCACCGAAACGAGCGTGCGGGCGCTCAGCCAGCAAGAGGGGCG
450 AACTCCGTATGCCTAAGTCAACCCA-TGAAACGAGCGTGCGGGCGCTCAG-CAGCCAGAGGGGCG
* * * *
17014788 GCATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGTGTGCTGTCTATCCTGCTGCCACAACCC
513 GGATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCACAACCC
* * *
17014853 TCGGTCCGGTCTGATCTTAGACTGGGAATGAATTCCATATGTATAAGCCAACCGACGAAACGAGC
578 TCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACGAGC
* * *
17014918 GAGCAGGCGGGTGGGCGGGCACTACG-CTGGCCAGAAAGATGAGATGCATAAGCCGTGGATAGAT
643 GAGCAGGCGGGCGGGCGGGCACTACGTC-GGCCAGAAAGA-GAGATGCACAAGCCGTGGATCGAT
* * *
17014982 AAGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCGATTTTTATGGCTTG
706 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
* * *
17015047 TAAATTCATACAATTGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTA
771 TAAATTCATACAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * *
17015112 TTTTTCATGATTTTTTAAACTTTTTGCGGTTCAGGATTTTTTAAAATGTTTTCGGAAGGAG
836 TTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAT
** *
17015173 TTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* *
17015238 AAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTT
66 TAAAAACTC-AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * * * *
17015302 TAATTGCTACTTGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTAAGTTCTTGAG
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* * * *
17015367 GTTTGATGAGGGATGGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATCTGCT
195 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * * *
17015432 TACACCCCCCCGGTCCCCCCGATCG-CCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATG
260 CACACCCCCCCGG-CCCCCCGATCGTCGA-AACCCC-ATGCTG-CCGTCAGGTTCTCC-GAGATG
* * * * * * *
17015496 CTCCGGCAATGGTGCCCCAATGAAGAAAAATGCGACACCAGCACATGCCCGAACCCA-ATATGAG
320 CTCTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGATAT--G
17015560 CTGCTGCAACCCTC-AGTCCGGTCTGATCTTAGA-TGGGAATGAACTCCGTATGCTTAGACTGGG
383 CTGC-GCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* *
17015623 AATGAACTTCGTATGCCTAAGTCAACCAATGAAACGAGCGTGCGGGCGCTCAGCAGGCCAGAGGG
446 AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCA-GCCAGAGGG
* * * *
17015688 GCGGGATGCACAAGCCGGGGATCGGCCGAGTCCCCCTCTGCATGCTATCGATCCAGCTACCACAA
510 GCGGGATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCACAA
* * * * * *
17015753 CCCTTGGTCTGGTCTGATCCTAGACTGGGAATGAACTCCGTATGCGTAAACCAACTGACGAAACG
575 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACG
* * * * * *
17015818 AGC-AGGC-GAACGGGCGGGCGGGCACTACGTCGGCCAGAGAGACAGGGTGCGCAAGCTGTGGAT
640 AGCGA-GCAG-GCGGGCGGGCGGGCACTACGTCGGCCAGAAAGAGA-GATGCACAAGCCGTGGAT
* * *
17015881 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAGGCCATTTTTATAG
702 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* * *
17015946 CTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
767 CTTGTAAATTCATACAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * * *
17016011 TTTATTTTTCACGATTTTTGAAACTTGTTGCGGATCAGAATTTTTTAAAATTTTTTTGGAAGGAT
832 TCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAT
** * * * * *
17016076 TTTTTACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATCAGC
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* * * *
17016141 TAAAAACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACATT
66 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
17016206 AATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* *
17016271 TTTCATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGT
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * ** * * *
17016336 ACAGCCCCCTCGGCCCCCCTCATTGCCGGAA-CTTA-GACTG--G---GATGC-AC-A-A-G-TC
261 ACA-CCCCCCCGGCCCCCC-GATCGTCGAAACCCCATG-CTGCCGTCAGGTTCTCCGAGATGCTC
* ** * * *
17016389 -GGGGATCGGT-------CG-AG-----T-C--C-CCCTCTGCATGCTATCGA-TCCAGCTA--C
323 TGGCGAT-GGTGCCCCGACGAAGAAAAATGCGGCACCAGC-ACATGC--TCGAGCCCAGATATGC
* * * **
17016433 --CGCAACCCTCGATCCGATCTGATCCTAGACTGGGAATGAACTCCGTATGCCTA-A--GCCAAC
384 TGCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA-
** * ** * * * *
17016493 TG-A---CG-A-AAC-GAG-C-AGGC--G-AGCGGGCG-GCCGGGCACT-ATGCAGGCCAGAGAG
448 TGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTG-CGGGCGCTCA-GCA-GCCAGAGGG
* * ** * *** * ****** * * * * * *
17016544 ACAGGATGCGCAAGCCGCGGATCGATAGGGT-GGTAGGTGGGT-TTAGGC-A-CAT-CT-TCATA
510 GCGGGATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCT-GTCGATCCTGCTACCACA
*** * * * * * ** * * * * * * **
17016603 TTTCTGCGTGCCAAGG-C-CATTTTTATAGCTTGTAAATTCAA-ACAATGGTCCCTTAAGCC-TT
574 ACCCT-CG-GTC-TGGTCTGA-TCTTAGA-C-TGGGAA-TGAACTCCAT-AT-GCATAAGCCAAC
** *** * * ** **** ** * *
17016664 C-ACGTGA--AG-TTTCATGGCAAGACGACTCGTTTTCTATTTTTC-ACGATTTTTGAAACTTGT
630 CGACGAAACGAGCGAGCA-GGC-GGGCG-GGCGGGCACTA--CGTCGGCCA-----GAAA---G-
* * * *** ** ** **** * ** * * * * ** **
17016724 TGCGGAT-CAGAA-TTTTTTA-AAATTTTTTTGGAAGGAT-TTTTTA-CCCCAAACCTGGTA-GA
681 AG-AGATGCACAAGCCGTGGATCGA-TAGGGTGGTAGG-TGGGTTTAGGCAC-ATCTTCATATTT
* * ** * * * * * * ** *
17016783 CGTG-AT-CC-TTG-TATTTTT-T---TTG-GCATGCATGAAAAAAATCAGCTAAAAAC-GCGAA
742 C-TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT-ACAATAGTC-CCTTAAGCCTTC-AA
** * * * *** ** *** **
17016838 GTGTACAAGATTTTGTGACCATTTGA-AAAAAGTGTCCCTA--TTTCA-GACACATT--AA-TGG
803 GTG---AAG-TTTCATG-GCA--AGACGACTCGT-TTTCTATTTTTCATGA-TTTTTGAAACTTT
* * ** *** * * * * *
17016896 CTACTGG--CAACAAACCTGTAAAA---TCTC-AAATGCT
859 TTGC-GGTTC-AGGATTTTTTAAAATTTTTTCGGAAGGAT
* *** * ** ** ** * ******
17016930 CTTT-------AAGGGGGT-G---TGAGTTCTTG-AGGTTTCAT-G-A-G-GGATAGGGGGCCA-
1 TTTTGGCCCCAAACTTGGTAGACATGA-TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
* * *** * * ** * * * *** * * * * *
17016978 ATATAAGGGCCAA--GTACTAGCACCCATCG-CACATCATGTGCGTACA-CG-CCCC--CTCGGC
65 CTAAAAACTCAAAGTGTACAAG-A--TTTTGTGAC--CATTTGAAAAAAGTGTCCCCATTTCAGA
* ** * * ** * * **** *** * * **
17017036 CCCCCTCATTGC--C-GGAACCCCAATGCTCTTTAAGGGGGTGTGA-GTTC-TCAA-GGTTTGAT
125 CACTTTAATGGCTACTGG--CAGCAA-AC-CTGTAA-AATCTCAAATGCTCTTTAAGGGGGTG-T
*** * ** ** * ** ** * *
17017095 GAGGGAT-TAGG---GACCA-ATATA-AGGGCCAAGTACCAGCACCAA-T--CA-CACATCATGT
184 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA-TATAAGGGCCAAGTACCAGCAC-CCAT-C
* * * * ** * * * *
17017150 GCGCA-CA---CCCCCCAGCCCCCCC-G---ATCG--C-TAG-AACCCTAATGCCGTCGATCAGG
246 GCACATCATGTGCGCACA-CCCCCCCGGCCCCCCGATCGTCGAAACCC-CATGCTGCCG-TCAGG
* * * * * *
17017203 TTCTCTGTGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGCGGCACCAACACATGCCCGAG
308 TTCTCCGAGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAG
*
17017268 CCCAGCATGTGCTGCCGCAACCCTC-A----G-C----C-----C--GG--T---CT--G-AT-C
373 CCCAG-ATATGCTG-CGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* ** * * *
17017307 TTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACAAAACAAGCATGCGGGCACTCAGCC
436 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG-C
* * * * ** * *
17017372 AACCAGAGGGGCTGGTTGCGTAAGCCGGGGATCGGTAGGGTCCCCCTCTGCGTGCTGCCGATCCT
500 AGCCAGAGGGGCGGGATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTCGATCCT
* * * * * * *** *
17017437 AC-AGTCGCAACCCTTGGTCTGGTCCGATCTTAGACTAGGAATGAACTTTGTATGCCTAAGCCAA
565 GCTA-CCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAA
** * * * * * * *
17017501 TTGAC-AAA--A-TGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
629 CCGACGAAACGAGCGAGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAAAGA-GAGATGCACAA
* * *
17017562 GTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGAATGCCAATGCCA
693 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
17017627 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
758 TTTTTATGGCTTGTAAATTCATACAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGAC
* * * * *
17017692 AACTCCTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTTTAAATTTTT
823 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGA-TTTTTTAAAATTTTT
* * *
17017757 TTGAAAGGAG
887 TCGGAAGGAT
* * * *
17017767 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTAAAC
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
*
17017832 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-GAACACTT
66 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTT
*
17017896 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCTAATGCTCTTTAAGGGGGTGTGAG-TCTCGAG
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
17017960 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATCAGCACCCATCACACATCATGTGCG
195 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * * * *
17018025 CACACCCCCCAGCCCCCCCGATCGTTGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCT
260 CACACCCCCCCGGCCCCCCGATCGTCGAAACCCC-ATGCTG-CCGTCAGGTTCTCCGA-GATGCT
* * * * *
17018090 CCGGTGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
322 CTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAG-ATATGCTG
* * * *
17018155 TCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATG
386 -CGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
** * * ** * *
17018220 AACTCCGTATGCCTAAGTCAACCCACAAAATGAGCGTACGGGCATTCAGCCGACCAGAGGGGCAG
450 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCAG-CCAGAGGGGCGG
** ** *** * * * * * **
17018285 G-TGCGCAAATCGGGGATCATTC-ATATCCCCGTCTACGTGCTG-CTGATCCAGCAACTGCAACC
514 GATGCATAAGCCGGGGATCGGCCGA-GTCCCCCTCTGCGTGCTGTC-GATCCTGCTACCACAACC
* * * *
17018347 CTCGGTCTGATCCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTATGCCAACCGACGAAACGA
577 CTCGGTCTGGT-CTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACGA
* * * * * * * * * ** *
17018411 GCGGGCGGGCGGACGAGCAGGCACTACGCCAGCCAGAGAGACGGGATGCGTAAGCTGTGGATCGA
641 GCGAGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAAAGA-GAGATGCACAAGCCGTGGATCGA
* * * * * *
17018476 TAGGGTGGTAGGTGTGTTTAGACACCTCTTCATATTTTTGCATGCCAATACCATTTTTTTGGCTT
705 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
* *
17018541 GTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
770 GTAAATTCATACAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * **
17018606 ATTTTTCATAATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAAAAGG-T
835 ATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAT
* * *
17018667 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCCCAAAAAAATTCAA
1 -TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
* *
17018732 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTT
65 CTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
*
17018797 TAATGGCTACT-ACTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
130 TAATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
17018861 GGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAGCCATTGCACATCATGTGC
194 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
** * * * ** * *
17018926 GCACACCCCCTAGCCCCCCCGATCGTCGGAACCTCAATGCCACCGATCAGGTTCTCGGCGATGCT
259 GCACACCCCCCCGGCCCCCCGATCGTCGAAACC-CCATGCTGCCG-TCAGGTTCTCCGAGATGCT
* * * * *
17018991 CCGACGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATG-TCCGAGCCCAGCATGTGCT
322 CTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCT-CGAGCCCAG-ATATGCT
* * * ** * ** *
17019055 ACCACAACCCTCGGTCCAATCCGATCTTAGACTAAGAATGAACTCCATATGCTTAGACTGGGAAT
385 -GCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * * * *
17019120 GAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGGGCGGGCGCTCAGCCGGCCAGAAGGGCG
449 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG-CAGCCAGAGGGGCG
* * * * * * * *
17019185 GTATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCT-ACTAATCCTGCTGCCACAACC
513 GGATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTC-GATCCTGCTACCACAACC
* ** * * **
17019249 CTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAATGACGAAACGAG
577 CTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACGAG
* * * * * * *
17019314 CGGGCGGGTGGACGGGCAGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGAT
642 CGAGC---AGG-CGGGCGGGCGGGCACTACGTCGGCCAGAAAGA-GAGATGCACAAGCCGTGGAT
* * *
17019379 CGATAGGATGGTTGGTGGGTTTAGGCACATCTTCATATTTTTG-AGTGCCAATGCCATTTTTATG
702 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA-TGCCAATGCCATTTTTATG
* * *
17019443 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTT
766 GCTTGTAAATTCATACAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTT
** * * * * *
17019508 TTCTATTTTTCATGATTTTCAAAAATTTTTGTGGTT-TGCCATTTTTTAAAAATTTTTTCAGAAG
831 TTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAG-GATTTTTT-AAAATTTTTTCGGAAG
17019572 GAT
894 GAT
* * *
17019575 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCTTGTACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* * * *
17019640 TAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAATGTCCCCATTTCAGAGACTTT
66 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
17019705 AATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * * **
17019770 TTTGATGAGGGATAGGGGGCCAATATAAGGTCCAAGTACCAGCAGCCTTCATACATCATGTGCGC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * * *
17019835 ACA-CCCCCCGGACCCCCCGATCGCCGGAACCTCAATGCCGCAGATTAGGTTCTCCAGCGATGCT
261 ACACCCCCCCGG-CCCCCCGATCGTCGAAACC-CCATGCTGCCG-TCAGGTTCTCC-GAGATGCT
* * ** * *
17019899 CCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACTGGCACATGCCCGAGCCCAGCATGTGCTG
322 CTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAG-ATATGCTG
* * *
17019964 CTGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACACCGTATGCTTAGACTGGGAATG
386 C-GCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
*
17020029 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCAGCCAGAGGGGCGG
450 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG-CAGCCAGAGGGGCGG
** * * * * * ** *
17020094 GATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATGCTGCCGATACTGCTGTCGCAACCCT
514 GATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCACAACCCT
* ** * * * ** *
17020159 CGGTCTGGTCCGATCTTAGACTACGTATGAAGTCCATATGCCTAAGTTAACCGACGAAATGAGCG
579 CGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACGA---
* * * * * * * *
17020224 GACGAGCGGGCGGTCGGGTGGGCACTACGCCGGCCTA-AGAGACGGGATGCGCAAGTCGTGGATC
641 G-CGAGCAGGCGGGCGGGCGGGCACTACGTCGGCC-AGAAAGA-GAGATGCACAAGCCGTGGATC
* * *
17020288 GATAGGGTGGT-GGTCGGTTTGGGCACATCTTCATATTTCTGCATGCAAATGCCATTTTTATGGC
703 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* * *
17020352 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACA-TGAAGTTTCATGGCAAGACAACTCATTT
768 TTGTAAATTCATACAATAGTCCCTTAAGCCTTCA-AGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
17020416 TTTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAT
832 TCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAT
* * *
17020481 TTTTGGCCCCAAACTTGGTAGACGTGATCCTGGTATTTTTTTTGGCATGCATAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
*
17020546 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTT
66 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * * * * *
17020611 GATTGTTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTATAAGGGGGTGTGAGTTCTCAAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
17020676 TTTGATGAGCGATAGGGGGCCAATATAAGGGCTAGGT-CCTAGCACCCATCGCACATCATGTGCG
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC-AGCACCCATCGCACATCATGTGCG
* * * * * * *
17020740 CACA-CCCCCTGGCCCCCTCGATCGCCGGAACCCTAGTGCCGACAGTCGGGTTCTCCGACGATGC
260 CACACCCCCCCGGCCCCC-CGATCGTCGAAACCCCA-TGCTG-CCGTCAGGTTCTCCGA-GATGC
* * * ** *** *
17020804 TCCGGTGATGGTGCCCTGGTGAAGAAAAATGCATTACCAGCACATGCTCGAGCCCAGCATGTGCT
321 TCTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAG-ATATGCT
*
17020869 GTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
385 G-CGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * *
17020934 GAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTCCGGGCGCTCAGCAGGCCAGAGGGGCG
449 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCA-GCCAGAGGGGCG
** ** * ** * * *
17020999 GGATGCGCAAGCCGGGGATCGATCGGGTCCCTTTCTGCGTGCTGCCGATCCTACTGCCACAACCC
513 GGATGCATAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCACAACCC
** * * ** * * *
17021064 TCTATCCGGTCTGATCTTAGACTGGGAATGAACTTCGCATGCCTAAGCCAACTGACGAAATGA--
578 TCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACGAGC
* * * * * * * *
17021127 GTG--GGCGGGCGGGAGGGCATTACGCCGGCCGGAGAGACGGGATGCGCAAGCCGTGGATCGATA
643 GAGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAAAGA-GAGATGCACAAGCCGTGGATCGATA
*
17021190 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGT
707 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGT
* * * * *
17021255 AAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACGACTCGTTTTCAAT
772 AAATTCATACAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * *
17021320 TTTTCATGATTTTCGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTTGGAAGGAG
837 TTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAT
* * * * * *
17021380 TTTTGGCCCCAAAATTTGTAAACATGATCCTTGTATTTGTGTTGGCATGCA-TAAAAAA---A--
1 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
*
17021439 T----A--CAAAGTGTAGAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
17021498 AATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
17021563 TTTGATTAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
** * * * * * * *
17021628 ACACCCCCTTGACCCCCCGATTGTCGGAACCCCAATACCGCCGGTCAGGTTCTCTGGCGATGCTC
261 ACACCCCCCCGGCCCCCCGATCGTCGAAACCCC-ATGCTGCC-GTCAGGTTCTC-CGAGATGCTC
* * * * * *
17021693 CGGTGATGGTGCCCC-AGCAAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGTATGTGCTA
323 TGGCGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAG-ATATGCTG
* * * ** * *
17021757 CTGCAA-CCTGTGGTTCAATCCGATCTTAGACTGGGAATAAACTGCCGTATGCTTA
386 C-GCAACCCT-CGATCCGGTCTGATCTTAGACTGGGAATGAACT-CCGTATGCTTA
17021812 AGTCAACCCA
Statistics
Matches: 6085, Mismatches: 1102, Indels: 714
0.77 0.14 0.09
Matches are distributed among these distances:
816 2 0.00
817 2 0.00
818 3 0.00
819 1 0.00
820 1 0.00
821 1 0.00
824 7 0.00
825 17 0.00
826 9 0.00
827 35 0.01
828 19 0.00
829 23 0.00
830 23 0.00
831 26 0.00
832 7 0.00
833 13 0.00
834 13 0.00
835 28 0.00
836 36 0.01
837 28 0.00
838 68 0.01
839 23 0.00
840 14 0.00
841 11 0.00
842 5 0.00
843 17 0.00
844 15 0.00
845 8 0.00
846 4 0.00
847 11 0.00
848 8 0.00
849 2 0.00
850 11 0.00
851 13 0.00
852 11 0.00
853 27 0.00
854 31 0.01
855 58 0.01
856 71 0.01
857 11 0.00
858 19 0.00
859 25 0.00
860 17 0.00
861 19 0.00
862 16 0.00
863 30 0.00
864 13 0.00
865 6 0.00
867 4 0.00
868 4 0.00
869 25 0.00
870 25 0.00
871 2 0.00
872 23 0.00
873 83 0.01
874 6 0.00
875 3 0.00
876 6 0.00
877 1 0.00
878 1 0.00
879 1 0.00
882 2 0.00
883 2 0.00
886 5 0.00
887 294 0.05
888 27 0.00
889 5 0.00
890 262 0.04
891 16 0.00
892 2 0.00
893 1 0.00
894 4 0.00
895 7 0.00
896 5 0.00
897 1 0.00
898 158 0.03
899 286 0.05
900 4 0.00
901 375 0.06
902 462 0.08
903 734 0.12
904 673 0.11
905 135 0.02
906 785 0.13
907 447 0.07
908 342 0.06
909 4 0.00
911 1 0.00
912 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (896 bp):
TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCCCGGCCCCCCGATCGTCGAAACCCCATGCTGCCGTCAGGTTCTCCGAGATGCTCTGG
CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGATATGCTGCGCAA
CCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
GTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCAGCCAGAGGGGCGGGATGCAT
AAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCACAACCCTCGGTCTG
GTCTGATCTTAGACTGGGAATGAACTCCATATGCATAAGCCAACCGACGAAACGAGCGAGCAGGC
GGGCGGGCGGGCACTACGTCGGCCAGAAAGAGAGATGCACAAGCCGTGGATCGATAGGGTGGTAG
GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
CAATAGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
TTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAT
Found at i:17015615 original size:25 final size:26
Alignment explanation
Indices: 17015587--17015638 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17015577 CCGGTCTGAT
17015587 CTTAGA-TGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
17015612 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
17015638 C
1 C
17015639 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 6 0.24
26 19 0.76
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:17017002 original size:685 final size:686
Alignment explanation
Indices: 17015690--17017053 Score: 2534
Period size: 685 Copynumber: 2.0 Consensus size: 686
17015680 CCAGAGGGGC
17015690 GGGATGCACAAGCCGGGGATCGGCCGAGTCCCCCTCTGCATGCTATCGATCCAGCTACCACAACC
1 GGGATGCACAAGCCGGGGATCGGCCGAGTCCCCCTCTGCATGCTATCGATCCAGCTACCACAACC
* * * * *
17015755 CTTGGTCTGGTCTGATCCTAGACTGGGAATGAACTCCGTATGCGTAAACCAACTGACGAAACGAG
66 CTCGATCCGATCTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAACCAACTGACGAAACGAG
* * * *
17015820 CAGGCGAACGGGCGGGCGGGCACTACGTCGGCCAGAGAGACAGGGTGCGCAAGCTGTGGATCGAT
131 CAGGCGAACGGGCGGCCGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGAT
17015885 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAGGCCATTTTTATAGCTTG
196 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAGGCCATTTTTATAGCTTG
*
17015950 TAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTA
261 TAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
17016015 TTTTTCACGATTTTTGAAACTTGTTGCGGATCAGAATTTTTTAAAATTTTTTTGGAAGGATTTTT
326 TTTTTCACGATTTTTGAAACTTGTTGCGGATCAGAATTTTTTAAAATTTTTTTGGAAGGATTTTT
17016080 TACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATCAGCTAAA
391 TACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATCAGCTAAA
17016145 AACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACATTAATG
456 AACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACATTAATG
17016210 GCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTC
521 GCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTC
17016275 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACA-
586 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACAC
17016339 GCCCCCTCGGCCCCCCTCATTGCCGGAACTTAGACT
651 GCCCCCTCGGCCCCCCTCATTGCCGGAACTTAGACT
* * *
17016375 GGGATGCACAAGTCGGGGATCGGTCGAGTCCCCCTCTGCATGCTATCGATCCAGCTACCGCAACC
1 GGGATGCACAAGCCGGGGATCGGCCGAGTCCCCCTCTGCATGCTATCGATCCAGCTACCACAACC
*
17016440 CTCGATCCGATCTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAG
66 CTCGATCCGATCTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAACCAACTGACGAAACGAG
* *
17016505 CAGGCGAGCGGGCGGCCGGGCACTATG-CAGGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGA
131 CAGGCGAACGGGCGGCCGGGCACTACGTC-GGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGA
17016569 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAGGCCATTTTTATAGCTT
195 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAGGCCATTTTTATAGCTT
17016634 GTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
260 GTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
17016699 ATTTTTCACGATTTTTGAAACTTGTTGCGGATCAGAATTTTTTAAAATTTTTTTGGAAGGATTTT
325 ATTTTTCACGATTTTTGAAACTTGTTGCGGATCAGAATTTTTTAAAATTTTTTTGGAAGGATTTT
* *
17016764 TTACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCATGAAAAAAATCAGCTAA
390 TTACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATCAGCTAA
17016829 AAACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACATTAAT
455 AAACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACATTAAT
17016894 GGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
520 GGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
*
17016959 CATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGTACA
585 CATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACA
17017024 CGCCCCCTCGGCCCCCCTCATTGCCGGAAC
650 CGCCCCCTCGGCCCCCCTCATTGCCGGAAC
17017054 CCCAATGCTC
Statistics
Matches: 658, Mismatches: 19, Indels: 3
0.97 0.03 0.00
Matches are distributed among these distances:
684 1 0.00
685 628 0.95
686 29 0.04
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (686 bp):
GGGATGCACAAGCCGGGGATCGGCCGAGTCCCCCTCTGCATGCTATCGATCCAGCTACCACAACC
CTCGATCCGATCTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAACCAACTGACGAAACGAG
CAGGCGAACGGGCGGCCGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGAT
AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAGGCCATTTTTATAGCTTG
TAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
TTTTTCACGATTTTTGAAACTTGTTGCGGATCAGAATTTTTTAAAATTTTTTTGGAAGGATTTTT
TACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATCAGCTAAA
AACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACATTAATG
GCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTC
ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACAC
GCCCCCTCGGCCCCCCTCATTGCCGGAACTTAGACT
Found at i:17018215 original size:26 final size:26
Alignment explanation
Indices: 17018179--17018231 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17018169 CTGGTCTAAT
17018179 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
17018205 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
17018231 C
1 C
17018232 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:17019109 original size:26 final size:26
Alignment explanation
Indices: 17019080--17019132 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17019070 CCAATCCGAT
17019080 CTTAGACTAAGAATGAACTCCATATG
1 CTTAGACTAAGAATGAACTCCATATG
** *
17019106 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAAGAATGAACTCCATATG
17019132 C
1 C
17019133 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.21, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTAAGAATGAACTCCATATG
Found at i:17020024 original size:26 final size:26
Alignment explanation
Indices: 17019988--17020040 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17019978 CTGGTCCGAT
17019988 CTTAGACTGGGAATGAACACCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
*
17020014 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
17020040 C
1 C
17020041 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACCGTATG
Found at i:17020923 original size:26 final size:26
Alignment explanation
Indices: 17020894--17020946 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17020884 CCGGTCTGAT
17020894 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
17020920 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
17020946 C
1 C
17020947 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:17024150 original size:26 final size:26
Alignment explanation
Indices: 17024111--17024163 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17024101 CTGGTCTGAT
17024111 CTTAGACTAAGAATGAACTCCGTATG
1 CTTAGACTAAGAATGAACTCCGTATG
**
17024137 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAAGAATGAACTCCGTATG
17024163 C
1 C
17024164 CTAAATTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAAGAATGAACTCCGTATG
Found at i:17025324 original size:159 final size:159
Alignment explanation
Indices: 17025035--17025401 Score: 468
Period size: 159 Copynumber: 2.3 Consensus size: 159
17025025 ACTACGTATG
* *
17025035 CTTAGACTAGGAATGAACTTCGTCTGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAAC
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAAC
* * ** * * ** **
17025100 CGACCAGAGGGGTGGGACGCACAAGTTGGGGATCGACTGGGTCTCCCTCTGTGTGCTGCCGATCC
66 CGACCAGAAGGGCGGGACGCACAAGCCGGAGATCGACTGGATCTCCCTCTGCATGCCACCGATCC
* * *
17025165 TGCTGCCACAACCCTCGGTCCGATCCCAT
131 TACAGCCACAACCCTCGGTCCGATCCAAT
* *
17025194 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAGC
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAAC
* *
17025259 CGGCCAGAAGGGCGGGATGCACAAGCCGGAGATCGA-TCGGATC-CCTCTCTGCATGCCACCGAT
66 CGACCAGAAGGGCGGGACGCACAAGCCGGAGATCGACT-GGATCTCC-CTCTGCATGCCACCGAT
** *
17025322 CCTACAGCCGTAACCCTCGGTCCGGTCCAAT
129 CCTACAGCCACAACCCTCGGTCCGATCCAAT
* * * *
17025353 CTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAACGAG
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAG
17025402 TGGGCGGGCG
Statistics
Matches: 179, Mismatches: 27, Indels: 4
0.85 0.13 0.02
Matches are distributed among these distances:
158 3 0.02
159 176 0.98
ACGTcount: A:0.24, C:0.30, G:0.27, T:0.19
Consensus pattern (159 bp):
CTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAAC
CGACCAGAAGGGCGGGACGCACAAGCCGGAGATCGACTGGATCTCCCTCTGCATGCCACCGATCC
TACAGCCACAACCCTCGGTCCGATCCAAT
Found at i:17026937 original size:895 final size:893
Alignment explanation
Indices: 17025194--17037453 Score: 14368
Period size: 903 Copynumber: 13.8 Consensus size: 893
17025184 CCGATCCCAT
* *
17025194 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * * **
17025259 CGGCCAGAAGGGCGGGATGCACAAGCCGGAGATCGATCGGATCCCTCTCTGCATGCCACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * ** *
17025324 TAC-AGCCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
131 TGCTA-CCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
17025388 ACCGATGAAACGAGTGGGCGGGCGGGCGGGCGGGCACTACA-CCGGCCAGAGAGACGGAATGCGC
195 ACCGACG-AA--A----GCGAGCGGGCGGGCGGGCACT-CATCCGGCCAGAGAGACGGGATGCGC
* *
17025452 AAGCTGTGGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
252 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
17025517 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
317 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * *
17025582 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCAGTTCAAGATTTTTAAAAAATTT
382 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * * ** * * *
17025647 TTCGGATGGAGTTTTGGACCCAAATTTTATTAGACATGATCCTTGTATTTTTTTTTCGCATGCAC
447 TTCGGAAGGAGTTTTGGCCCCAAA-CTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCAC
*
17025712 AAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
510 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
17025777 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATAC-CTTTTAAAGGGGT
575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGT
* * * *
17025841 GTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATACAAGGGTCAAGTACCAGCACCCATCA
639 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
** * * *
17025906 TGCATCATGTGTGCACACCCCCCGGCCCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTT
704 CACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
* * *
17025971 CTTCGACGATGCTCCGACG--GGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCAAGC
768 CTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGC
* * * * * * *
17026034 CCAGCATGTGCTGCTGTAACCCTCGATCCGATCTGATCTTTGACTGGGAATGAACCCTGAATG
833 CCAGCATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAA-CC-GTATG
* * **
17026097 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCATGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * *
17026162 CGACCAGAGGGACGGGATGCGCAAGCCGGGGATCGGTCAGG-CCCCTCTCTGTGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC-CTCTGCGTGCTGCCGATC
* * * * *
17026226 CTCCTACCACAACCCTCGGTTTGGTCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
17026291 ACTGAAGAAAG-GAGCGGTCAGGCGGGCACTCATCCGACCAAAGAGACGGGATGCGCAAGCCGTG
195 ACCGACGAAAGCGAGCGGGCGGGCGGGCACTCATCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
**
17026355 GATCGATAGGGTGGTAGGTGCTTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
260 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
17026420 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
325 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
** * * *
17026485 TTTTCTATTTTTCATAATTTTAGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGAAAG
390 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAG
* * * * *
17026550 GCGTTTTGGCCCTAAACTTGGTAGATGTGATCCTTGTATTTTTATTGGCCTGCACAAAAAAATTC
455 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * * * *
17026615 GGCTAAAAATTCGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACAT
520 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
17026680 TTTAATGGCTACTGGCAGCAAACCTGTAAAATATCAAATGCTTTTTAAGGGAGTGTGAGTTCTCG
585 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
17026745 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
650 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * *
17026810 CGCACACCCCTCCGGCCCCCCGATCATCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGACAATG
715 CGCACACCCC-CCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * * * * *
17026875 CTCTGGCGATGGTGCCCCTG-CGAAGAAAAATACGGCACCAACACATGCTCGAGTCTAGCATGTG
779 CTCCGACGATGGTGCCCC-GACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
* * *
17026939 CTGTCGCAACCCTTGGTCTTG-TCTGATCTTAGACTGGGAATGAACTTCGTATG
843 CTGCCGCAACCCTTGGTC-CGATCCGATCTTAGACTGGGAATGAAC--CGTATG
* * *
17026992 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGAGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * ** * *
17027057 CGGCCAGAGGGGCTGGATGCACAAGCCGGGGATCGGTCGTCTCCCCCTCTGCATGCTGCCAAT-C
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * *
17027121 TGCTGTCGCAACCCTCAGTCTGGTCTAATCTTAGACTGGGAATGAACTCAGTATGCCTAAGCTAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ***
17027186 CCGATGAAACGAGTGAGCGGGCGGACGGGCGGGCGGGCACTACGCAGGCCAGAGAGACGGGATGC
196 CCGACG-AA--AGCGAGC--G-GG-CGGGCGGGCACTCA-T-C-C-GGCCAGAGAGACGGGATGC
*
17027251 GTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
250 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
* *
17027316 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCTTGGCA
315 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * *
17027381 AGACGACTCGTTTTCTATTTTTCAGGATTTTCGAAACTTTTTGCGTTTCAAGATTTTTTAAAATT
380 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATT
* *
17027446 TTTTCGGAAAGAGTTTTGGCCCCAATCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
445 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
17027511 AATACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-TATCCCCA
510 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
*
17027575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* **
17027640 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTACCAAAACCCATCGC
640 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
17027705 ACATCATGTGGGCACACCCCCCGG-CCCCCAATCGTCGGAACCCCAATGCCGCCGATTAGGTTCT
705 ACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * *
17027769 CCGGCGATGCTCGGATGATGGTGCCCCGACGAAGAAAAATGCAGCACCAACACATGCCCGAGCCC
770 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
* **
17027834 AGCATGTGCTGTCAAAACCC----T-C--T--G----T---CT-GG--T---CCG-AT-
835 AGCATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACCGTATG
* * ** *
17027869 CTTAGACTGGAAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* ** * ** * *
17027934 CGGCCAGAGGGGCGGGATGCGTAAGCCGAAGATCGGACGGGTCTGCCTCTGCGTGCTACCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * ** *
17027999 TGCAACCGTAATCCTCGGTCTGGT-TCAATCTCAGACTGGGGGTAAACTCCGTATGCCTAAGCCA
131 TGCTACCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
17028063 ACCGATGAAATGAGCGGGCGAGCGGGCGGGCAGGCACTGCA-CCGGCCAGAGAGACGGGATGCAC
195 ACCGACG-AA--A----GCGAGCGGGCGGGCGGGCACT-CATCCGGCCAGAGAGACGGGATGCGC
* * * *** *
17028127 AAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTATGCACATCTTGATATTTCTATGTGCCAATTC
252 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
17028192 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
317 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * * *
17028257 ACGACTCATTTTCTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTCAAAATTTT
382 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * *
17028322 TTTGGAAAGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
447 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
17028387 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATT
512 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
17028452 TCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
577 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * * *
17028517 AGTTCTCGAGGTTTGATGAGGGATACGGAGCCAATATAAGTGCCATGTACCAGCACCCATTGCAC
642 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * *
17028582 ATCATGTGTGCACACCCCCCCGGCCCCTCGATCGTCGGAACCCCAATGCCACCGGTTAGGTTCTC
707 ATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * **
17028647 CGGCGGTGCTCTGATGATGGTGCCCCGGCGAAGAAAAATGCCGCACCAACATGTGCCCGAGCCCA
771 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCA
* * * * *
17028712 GCATGTGCTGCTGCAACCCTTGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCATATG
836 GCATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAA--CCGTATG
* * * *
17028772 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCGACAAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * *
17028837 CGGCCACAGGGGCAGGATGCGCAAGCCGGGAATCGGTCGAGT-CCCTTCTGCATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * * *
17028901 TACTATCGCAACCTTTGATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
17028966 CCGACGAAA-CGAGCAGGCGGGCGGGCACTACAT-CGGCCAGAGAGACGGAATGCACAAGCCGTG
196 CCGACGAAAGCGAGCGGGCGGGCGGGCACT-CATCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
17029029 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTA
260 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * * *
17029094 TTGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGTAAGACGACTCG
325 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* *
17029159 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACTGTTC-AGGATTTTTTAAAATATTTTT-GGA
390 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAAT-TTTTTCGGA
* * * *
17029222 AGGGGATTTGGCCCCAAACTCGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
453 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
17029287 TCAGCTAAAAACTTGAAGTGTACAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCCA-A
518 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT-CAGA
* * *
17029351 CACTTTAATGGCTACTGACAGCAAACCTATAAAAGCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
582 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
17029416 TCGAGGTTTGATGAGGGATACGGAGCCAATATAGGGGCCATGTACCAGCACCCA-CTGCACATCA
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCACATCA
* * *
17029480 TGTGCGCACACCCCCCGTGGCCCCCCGATTGTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCGA
711 TGTGCGCACACCCCCC--GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * *
17029545 TGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATGC-TCACCAACACATGCCCGAGCCTAGCA
774 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* ** * * * *
17029609 TGTGCTACCGTGACCCTTGGTCCAATCCGATCTTAGACTAGGAACGAACTCCGTACG
839 TGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAA--CCGTATG
* ** *
17029666 CTTAGACTGTGAATGAACTCCGTATGCCTAAGTCAACCCATAAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
** * * * * * * *
17029731 CGGCCAGAGGGATGGGATGCACAAGTCGGGGATCGGCCAGGTCCCCCTCTGTGTTCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* *
17029796 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGATTGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
17029861 CCGATGAAATGAGCAGGCGGGCTGGCGGGCGGGTACT-ATGCCGGCCAGAGAGACGGGATGCGCA
196 CCGACGAAA-GCG-A-GC--G--GGCGGGCGGGCACTCAT-CCGGCCAGAGAGACGGGATGCGCA
* * * * *
17029925 AGCCATGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCATCATATTTCTACTTGCCAATGCC
253 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
17029990 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCCTCACGTGAAGTTTCATGGCAAGA
318 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
17030055 CGACTCGTTTTTTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
383 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
** * * *
17030120 TCGGAAGGAGTTTTGGCCCTGAACTTAGTAGACGTGATCCTTGTAATTTTGTTGGCATGTACAAA
448 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
17030185 ACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
513 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
17030250 CAGACACTTTAATGGCTACTGGTAGCAAAACTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
578 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
17030315 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAACACCCATCTCACA
643 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
17030380 TCATGTGCGCACACCCCCCTCGGCCCCCCTGATCGTCGGAACCCCAA------C-GTC--G---T
708 TCATGTGCGCACA-CCCCC-CGGCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * *
17030433 -C-G-G-T--T------A-GGT-TCTC--C---G----AT---G-ATCAACACATGCCCGAGCCC
770 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
* * ** *
17030471 AGCATGTGCTGTCGCAACTCTCAGTCCGATCTGATCTTAGACTGGGAATGAA-C---T-
835 AGCATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACCGTATG
* * * *
17030525 C-T-G--T----ATG----CC--A-----AAGTCAACCCACGAAACGAGTGTGCGAGTGCTCTGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * *
17030571 CGGCCAAAGGGGCGGGATGTGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGTGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * *
17030636 TACTGTCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC-A
** ** *
17030701 TTAAGGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACAT-CGGCCAGAGAGACGGGATGCGCA
195 --ACCG--ACGA--AAGCGAGCGGGCGGGCGGGCACT-CATCCGGCCAGAGAGACGGGATGCGCA
* * *
17030765 AGCCGTGGATCGATGGGGTGGTTGGTGTGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
253 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
*
17030830 ATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
318 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
17030895 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTT
383 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * * *
17030960 TCGAAAGGAGTTTTGGCCCCAAGCTTGGCAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
448 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
17031025 AAAATTCAGCTAAAAACTCTATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
513 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
17031090 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
578 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
17031155 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAATTACCAGCACCCATCGCACA
643 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * **
17031220 TCATGTGCGCACACCCCACCCGGTCCCCTCGATCGCCTGAACCCCAATACCGTCAATCAGGTTCT
708 TCATGTGCGCACA-CCC-CCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * ** * * ** *
17031285 CCGGTGACGCTCCGGTGACGGTGCCTCGACGAAG-AAAATGCGGCACCAGTACAAGCCCGA-CCG
770 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCC-
* * * * *
17031348 AAGCATGTGCTGTCGTAACCCTAGGTCCGATCCGATCTTAGACTGGTAATGAACTCCGTATG
834 CAGCATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAA--CCGTATG
* * * * * *
17031410 CATAAACTAGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAACGAGCGTGC-GGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * *
17031474 CGGCCAGAGGGGCGGGATGCACAAGCTGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** ** * *
17031539 TGCTACCGCAACCCTCAGTCCAGTCCAATCTTAGACTGGAAATGAACACCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
17031604 CCGACGAAACGAGCGGGCGGGTGGGCGGGCGGGCACT-ACGCCGGCCAAAGAGACGGGATGCGCA
196 CCGACG-AA--AGCGAGC----GGGCGGGCGGGCACTCA-TCCGGCCAGAGAGACGGGATGCGCA
*
17031668 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTTCTGCATGCCAATGCC
253 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
17031733 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
318 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
17031798 CGACTCATTTTCTATTTTTAACGATTTTTGAAACTTTTTACGGCTT-GGGAATTTTTAAAATTTT
383 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCGAGATTTTTTAAAATTTT
* * * * *
17031862 TTTGGAAGGGGTTTTGGCCACAAACTTGGTAGAGGTGATCCTTGTATTTTTTTTGGCATGCACAA
447 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
17031927 AAAGATTCAGTTAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
512 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
** *
17031992 TCAGACACTTTAACAGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
577 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * * *
17032057 AGTTCTTGAGGTTTGATGACGGATAGGGGGCCAATATAAGGCCCAAGTACCAGCAACCATTGCAC
642 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
17032122 ATCATGTGCGCACA-----C--CCCCTCGATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTTC
707 ATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC-TC
** ** * *
17032180 TTGCGAT-CGTCCGACGATGGTGCCCCGGTGAAGAAAAAT--GGCACCAGCACATGCCGGAGCCC
771 CGGCGATGC-TCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
* *
17032242 AGCATGTGCTGCCGTAACCC-T--T--G----G----T---CT-GG--T---CTG-AT-
835 AGCATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACCGTATG
* * * * * *
17032277 CTTAGATTGGGAATGAACTCCGTATGCTTAAGTCAACCCACAAAACGAGCTTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * *
17032342 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGACAGGTCCCCCTCTGTGTGCTTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGC-TGCCGATC
* * * * * *
17032407 CTGCGACCCCAACCCTTGGTTTCGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
17032472 ATCGATGAAATAAGCAAGCGGCAGGTGGGCAGGCACT-A-CGCTGGCTAGAGAGACGGGATGCGC
195 ACCGACG--A-AAGCGAGC-G--GGCGGGCGGGCACTCATC-C-GGCCAGAGAGACGGGATGCGC
* *
17032535 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCATGCCAATGC
252 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* *
17032600 CATTTTTATGGCTTGTAAATTTATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
317 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * * **
17032665 ACGACTCGTTTTCCATTTGTCACGATTTTTTAAACATTTTACGGTTCGGGATTTTAAAAAATTTT
382 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * * *
17032730 TTTGGAAGGCGTTTTGGCCCCAAACTTGGTAGACGTGATCCGTGTATTTTTGTTGGCATGCTCAA
447 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
17032795 AGAAGTTCAGCTAAAAACTCGAAGTGTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
512 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
17032860 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
577 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * **
17032925 AGTTCTCGAAGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAAGTACCAGCACCCATAACAC
642 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
17032990 ATCATGTGCGCACACCCCCCGGCCCTCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCC
707 ATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * *
17033054 GGCGATGATCCGATGATGGTGCCTCGAC---G---AA----G-A--AA-A-ATGCCCGAGCCCAA
772 GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAG
** *
17033104 CATGTGCAACCACAA-CCTT--T--G----G-TC-----C--GG--T---CCG-AT-
837 CATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACCGTATG
* * * **
17033137 CTTAGACTGGGAGTGAACTTCGTATGCTTAAGTCAACCCACGAAATAAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * *
17033202 CGACCAGAGGGGCGGGATGTGTAAGCTGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * *
17033267 TGCTGCCGCAACCCTCAGTCTGGTTTGATCTTTGATTGGGAATGAGCTTCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * *
17033332 CCGACGAAA-TGAGCGGGCGGGCGGGCGAGCGGGCACTACGTCGGTGAGAGAGACAGGAAGCGCA
196 CCGACGAAAGCGAGCGGGCGGGCGGGC-A-C--TCA-T-C--CGGCCAGAGAGACGGGATGCGCA
*
17033396 AGCCGTGGATAGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
253 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
17033461 ATTTTTATGGCTTTTAAATTCATACCATGGTCCCTTAAGCCATCACGT-AACGTTTCATGGCAAG
318 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA-GTTTCATGGCAAG
* * * * * * *
17033525 ATGACTCGTTTTTTACTTTTCACGATTTTCT-AAACTTTTTGCGGTTCGGGATTTTTCAAAAATT
382 ACGACTCGTTTTCTATTTTTCACGATTTT-TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTT
* * * *
17033589 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTTTTTTTTTTGGCATGTACA
446 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
17033654 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
511 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
17033719 TTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
576 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
17033784 GAGTTCTCGAGGTTTGGTGAGGGATAGGGAGCCAATATAAGGGCCAAGTACAAGCACCCATCGCA
641 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * *
17033849 CATGATGTACGCACACCCCCCGGCCCCCCCGATCG-CTGGAACCCCAATGCCGCCGGTCAAGTTC
706 CATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTC
* * * * * *
17033913 TACGGCGATGCTCCGATGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCCCATGCCCGAGCC
769 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCC
* * * * * *
17033978 CAGCATGTGCTACCGCAACCCTAT-ATCCGATCCAATCTTACATTGGGAATGAACTCCTTATG
834 CAGCATGTGCTGCCGCAACCCT-TGGTCCGATCCGATCTTAGACTGGGAATGAA--CCGTATG
** *
17034040 CTTAGACTGGGGGTTAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * * *
17034105 GGGCTAGAAGGGTGGGATGCGCAAGCCAGGGATCGGGCGGGTCCCCCACTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
17034170 TGCTGCCGCAACCGTCGATCTGATCTGATTTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
17034235 CTGACGAAA-CGAGCGGGCGGGCGGGCACTACGT-CGACCAGAGAGACGGGATGCGCAAGTCGTG
196 CCGACGAAAGCGAGCGGGCGGGCGGGCACT-CATCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* **
17034298 GATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTA
260 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * * *
17034363 TGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCACGTGGAGTTTAATGGCAAGACAACTCG
325 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * *
17034428 TTTTCTATTTTTTATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGTAG
390 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAG
* * *
17034493 GATTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAGTC
455 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
17034558 AGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
520 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
17034623 TTTAATGGCTACTGGCAGGAAAGCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTG
585 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * *
17034688 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTACTAGCACCCATCGCACATCATTTG
650 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * * * * **
17034753 CACACAACCCCCAGCCCCCTGATCATCGGAACCCCAATGCCGCCGATCAGGTTCCCCGATGATGC
715 CGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGC
* *
17034818 TTCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAGCATGTGCT
780 TCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT
* *
17034883 ACCGTAACCC----T-CG----G-TC-----C---G-AT---CCG-AT-
845 GCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACCGTATG
* * *
17034908 CTTAGAAT-GGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * ** * * *
17034972 CGACCAGAGGGGCCGGATGCGCAAGCCGGGGATTAGCCGGGTCCCCCTCTGTGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* *
17035037 TGCTGCCGCAACCCTCGGT-TCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTACCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
17035101 ACAGACGAAACGAACGGGTAGGCAGGCGGGTGGGCACTACGT-CGGCCAGAGAGACGAGATGCGC
195 ACCGACGAAA-G--C--G-A-GCGGGCGGGCGGGCACT-CATCCGGCCAGAGAGACGGGATGCGC
* * *
17035165 AAGCCGTAGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
252 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* *
17035230 CATTTTTATGGCTTGTAAATTTATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
317 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* **
17035295 ACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAAATTTTACGGTTC-AGGATTTTTTAAAATTT
382 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTT
* *
17035358 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACA
446 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * * *
17035423 AAAAAATTCAGCTAAAAACTCAAAGTGTAAAAGATTTTGTGACCATTTGAAACAGGTATCCCCAT
511 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
17035488 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGT
576 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
17035553 GAGTTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCAG-
641 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GC
** * * * * *
17035617 ACATCATGTGCGCACACCCCCTCGGCCCCCTAATCGCCAGAACCCCAATGTCGCCGATCAAGTTC
705 ACATCATGTGCGCACACCCCC-CGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * * **
17035682 TCCGACGATGCACCGACGATGGTGCCTCGACGAAGAAAAATGCAGCACCAACACATGCCCGAATC
769 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCC
* * * * **
17035747 CACCATGAGCTGCCAG-AACCCTTGGTCCTATCTGATCTTAGGTTGGGAATGAACTTCGTATG
834 CAGCATGTGCTGCC-GCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAAC--CGTATG
* * *
17035809 CTTAGATTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * *
17035874 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGTGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
17035939 TGCTACCGTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
17036004 CCGACGAAATGAGCGGGCGGGCGGGCGGGCACT-ACGCCGGCCATAGAGACAGGATGTGCAAGCC
196 CCGACG-AA--AGCGAGCGGGCGGGCGGGCACTCA-TCCGGCCAGAGAGACGGGATGCGCAAGCC
* *
17036068 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGTCAATACCATTT
257 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
17036133 TTATGGCTTGTAAATTCATACAATGGTCCCTTAATCCTTCACGTGAAGTTTCACGGCAAGACGAC
322 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * *
17036198 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAA
387 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC-G
* * * *
17036263 AAAGGAGTTTTGGCCCCAAACTTGGTAGATGTTATCCTTGTATTTTTTTTGG-AGTGCACAAAAA
451 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAA
*
17036327 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTC-
515 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
17036391 GAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
580 G-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * ** *
17036456 TTCTCAAGGTTTGATGAGGAAAAAAGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACAT
644 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** * *
17036521 TATGTGCGCACACCCACCCCGTCCCCCCCGATCACCGGAACCCCAATGCCACTGGTCAGGTTCTC
709 CATGTGCGCACA-CC-CCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
** * *
17036586 CGGTAATGC-CCTGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAACACATGCCCGAGCCC
771 CGGCGATGCTCC-GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
* *
17036650 AGCATGTGCTGCCACAACCC-----CCG----G-TCTT----T-----T---TCG-AT-
835 AGCATGTGCTGCCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACCGTATG
* * * *
17036685 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAATGAACGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
** ***
17036750 CGGCCAGAGGGATGGGATGCGCAAGCCGGGGATCAACCGGGTCCCCCTC-GCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * ** *
17036814 TGCTGCCACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCGGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
17036879 CCGATGAAA-CGAGC-GGTGGGCAAGGCGGCACTAAGCCGGCCAGAGAGACGGGAT-CGCAAGCC
196 CCGACGAAAGCGAGCGGGCGGGC---G-GGCACTCATCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
17036941 ATGGATCGATAGGGTTGGTAGGTGGGGTTTAGGCCCATCTTCATATTTCTGCGTG-CAGATGCCA
257 GTGGATCGATAGGG-TGGTAGGT-GGGTTTAGGCACATCTTCATATTTCTGCATGCCA-ATGCCA
* *
17037005 TTTTTATGGCTTCTAAAATTCCATACAA-GGTCGCGCTTAAGGCGCGTTCAGCGTGGAAGCTTCG
319 TTTTTATGGCTTGT-AAATT-CATACAATGGTC-C-CTTAA-GC-C-TTCA-CGT-GAAGTTTC-
* * * * *
17037069 ATTGTGCGAAGACTGAAC-CATTTT-TATTTTTTCACGGA-TTTTCAAAGCCTTTTGCGGTTCAA
374 A-TG-GC-AAGAC-G-ACTCGTTTTCTA-TTTTTCAC-GATTTTTGAAA-CTTTTTACGGTTCGA
* * * *
17037131 GATTTTTTAAAGTTTTTTC-GAAGGAGTTTTTGCCCCAATCTTGGTGGACGTGATCCTTGTAGTT
431 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TT
* ** * *
17037195 TTGGTTGGCATGCATCAAAAACTTTCAGGGCT-AAAACTCGTTAGTGTTACAAGAATTTGTGGAC
495 TTTGTTGGCATGCA-CAAAAAAATTCA--GCTAAAAACTCG-AAGTG-TACAAGATTTTGT-GAC
*
17037259 CATTTTGAAAAAAGTTGTCCGCCATTTGTCAGACACTTTAATAGCTACTGGCAAGCCAAACCTGT
554 CA-TTTGAAAAAAG-TGTCC-CCA-TT-TCAGACACTTTAATGGCTACTGGC-AG-CAAACCTGT
** *
17037324 AAAAATCTCAAATTATTCTTTAAGGGGGT-TGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCA
612 -AAAATCTCAAA-TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* *
17037388 ATATAAGGGTCAAGTACCAGCACCCATCGCAAATCATGTGCGCACACCCCCCGGCCCCCCGATCG
675 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCG
17037453 T
740 T
17037454 NNNNNNNNNN
Statistics
Matches: 9824, Mismatches: 1176, Indels: 719
0.84 0.10 0.06
Matches are distributed among these distances:
840 633 0.06
841 8 0.00
842 3 0.00
843 2 0.00
844 2 0.00
845 4 0.00
846 3 0.00
847 4 0.00
849 1 0.00
851 3 0.00
852 10 0.00
853 2 0.00
854 3 0.00
855 5 0.00
856 2 0.00
857 3 0.00
858 2 0.00
859 71 0.01
860 589 0.06
861 18 0.00
862 48 0.00
863 1 0.00
864 2 0.00
865 5 0.00
866 65 0.01
867 218 0.02
868 531 0.05
869 76 0.01
870 11 0.00
871 7 0.00
872 2 0.00
873 49 0.00
874 661 0.07
875 575 0.06
876 125 0.01
877 261 0.03
878 143 0.01
879 12 0.00
880 6 0.00
881 7 0.00
882 9 0.00
883 8 0.00
884 8 0.00
885 4 0.00
886 7 0.00
887 47 0.00
888 34 0.00
889 48 0.00
890 12 0.00
891 8 0.00
892 17 0.00
893 350 0.04
894 860 0.09
895 1053 0.11
896 16 0.00
897 12 0.00
898 218 0.02
899 62 0.01
900 267 0.03
901 106 0.01
902 392 0.04
903 1600 0.16
904 55 0.01
905 150 0.02
906 308 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (893 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAAGCGAGCGGGCGGGCGGGCACTCATCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGG
AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
GCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT
CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACCGTATG
Found at i:17027017 original size:26 final size:26
Alignment explanation
Indices: 17026966--17027018 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17026956 CTTGTCTGAT
* *
17026966 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
17026992 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
17027018 C
1 C
17027019 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:17028782 original size:26 final size:26
Alignment explanation
Indices: 17028746--17028798 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17028736 CTGGTTCGAT
17028746 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
17028772 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
17028798 C
1 C
17028799 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:17029669 original size:26 final size:26
Alignment explanation
Indices: 17029640--17029689 Score: 75
Period size: 26 Copynumber: 1.9 Consensus size: 26
17029630 CCAATCCGAT
17029640 CTTAGACTAG-GAACGAACTCCGTACG
1 CTTAGACT-GTGAACGAACTCCGTACG
*
17029666 CTTAGACTGTGAATGAACTCCGTA
1 CTTAGACTGTGAACGAACTCCGTA
17029690 TGCCTAAGTC
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
25 1 0.05
26 21 0.95
ACGTcount: A:0.30, C:0.24, G:0.22, T:0.24
Consensus pattern (26 bp):
CTTAGACTGTGAACGAACTCCGTACG
Found at i:17035819 original size:26 final size:26
Alignment explanation
Indices: 17035783--17035835 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17035773 CCTATCTGAT
*
17035783 CTTAGGTTGGGAATGAACTTCGTATG
1 CTTAGATTGGGAATGAACTTCGTATG
17035809 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGATTGGGAATGAACTTCGTATG
17035835 C
1 C
17035836 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.13, G:0.28, T:0.34
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTTCGTATG
Found at i:17038972 original size:26 final size:26
Alignment explanation
Indices: 17038936--17038988 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17038926 CCAGTCTGAT
*
17038936 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
17038962 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
17038988 C
1 C
17038989 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:17039880 original size:26 final size:26
Alignment explanation
Indices: 17039830--17039882 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17039820 CCGGTCTGAT
* **
17039830 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
17039856 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
17039882 C
1 C
17039883 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:17043894 original size:25 final size:26
Alignment explanation
Indices: 17043843--17043894 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17043833 GTTGACTTAG
17043843 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17043869 GCATATGGAGTTCATT-CCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17043894 G
1 G
17043895 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 10 0.40
26 15 0.60
ACGTcount: A:0.27, C:0.23, G:0.21, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17044774 original size:26 final size:26
Alignment explanation
Indices: 17044738--17044790 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17044728 GTTGACTTAG
17044738 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17044764 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17044790 G
1 G
17044791 ATCAGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17045691 original size:25 final size:26
Alignment explanation
Indices: 17045642--17045693 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17045632 GTTGACTTAG
*
17045642 GCATACGGAGTTCATTTCCAGTCTAA
1 GCATACAGAGTTCATTTCCAGTCTAA
17045668 GCATACAGAGTTCA-TTCCAGTCTAA
1 GCATACAGAGTTCATTTCCAGTCTAA
17045693 G
1 G
17045694 ATCGAACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 12 0.48
26 13 0.52
ACGTcount: A:0.29, C:0.23, G:0.19, T:0.29
Consensus pattern (26 bp):
GCATACAGAGTTCATTTCCAGTCTAA
Found at i:17046314 original size:26 final size:26
Alignment explanation
Indices: 17046278--17046330 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17046268 GTTAACTTAG
*
17046278 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17046304 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17046330 G
1 G
17046331 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17049457 original size:26 final size:26
Alignment explanation
Indices: 17049421--17049471 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
17049411 GTTGACTTAG
*
17049421 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17049447 GCATACGGAGTTCATTCCCAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
17049472 TGATCGGACT
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.25, G:0.20, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17051270 original size:26 final size:26
Alignment explanation
Indices: 17051241--17051293 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17051231 GTTGACTTAG
17051241 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17051267 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17051293 G
1 G
17051294 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17052231 original size:159 final size:158
Alignment explanation
Indices: 17051942--17052317 Score: 416
Period size: 159 Copynumber: 2.4 Consensus size: 158
17051932 GCGTAATGCC
* * * * * * *
17051942 CGCCCGTCCGTTCGTTTCGTCGGTTGGCTTAGGCT-TACGGAGTTCAATCTCGGTCTAAGATCGG
1 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGG-TATACGGAGTTCATTCCCAGTCTAAGATCAG
* * * * *
17052006 ACCAGACTGAGGGTTACGGTAGTAGGATCGACAGCACACAGAGAGGGACCCGGTTGATCACCGGC
65 ACCAGACCGAGGGTTACGGTAGCAGGATCGACAGCACACAGAGAGGGACACGATCGATCACCGGC
** * *
17052071 TTACGCATCCCGTCCTTCAGGCCGACTGAG
130 TTACGCATCCCACCCCTC-GGACGACTGAG
17052101 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGA
1 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGA
* ** ** *
17052166 CCAGACCGAGGGTTGCGGTAGCAGGATCGGTAGCATGCAGAG-GGTGACACGATCGATCCCCGGC
66 CCAGACCGAGGGTTACGGTAGCAGGATCGACAGCACACAGAGAGG-GACACGATCGATCACCGGC
* * * *
17052230 TTGCGCATCCCACCCCTCTGACGGCTGCG
130 TTACGCATCCCACCCCTCGGACGACTGAG
* * * * *
17052259 CTCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTAATT-CCAGATCTAAG
1 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAG-TCTAAG
17052318 CATACGGAGT
Statistics
Matches: 183, Mismatches: 31, Indels: 7
0.83 0.14 0.03
Matches are distributed among these distances:
157 4 0.02
158 59 0.32
159 120 0.66
ACGTcount: A:0.19, C:0.28, G:0.30, T:0.23
Consensus pattern (158 bp):
CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGA
CCAGACCGAGGGTTACGGTAGCAGGATCGACAGCACACAGAGAGGGACACGATCGATCACCGGCT
TACGCATCCCACCCCTCGGACGACTGAG
Found at i:17052327 original size:26 final size:26
Alignment explanation
Indices: 17052291--17052343 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
17052281 GTTGACTTAG
17052291 GCATACGGAGTTAATT-CCAGATCTAA
1 GCATACGGAGTTAATTCCCAG-TCTAA
*
17052317 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTAATTCCCAGTCTAA
17052343 G
1 G
17052344 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 21 0.84
27 4 0.16
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTAATTCCCAGTCTAA
Found at i:17053224 original size:26 final size:26
Alignment explanation
Indices: 17053195--17053247 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17053185 GTTGACTTAG
17053195 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17053221 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17053247 G
1 G
17053248 ATCGGACTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17054126 original size:26 final size:26
Alignment explanation
Indices: 17054089--17054167 Score: 133
Period size: 26 Copynumber: 3.0 Consensus size: 26
17054079 GTTGACTTAG
17054089 GCATAC-AGAGTTCATTCCCAGTTTAA
1 GCATACGA-AGTTCATTCCCAGTTTAA
17054115 GCATACGAAGTTCATTCCCAGTTTAA
1 GCATACGAAGTTCATTCCCAGTTTAA
*
17054141 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTTTAA
17054167 G
1 G
17054168 ACCGGACCAG
Statistics
Matches: 51, Mismatches: 1, Indels: 2
0.94 0.02 0.04
Matches are distributed among these distances:
26 50 0.98
27 1 0.02
ACGTcount: A:0.30, C:0.24, G:0.16, T:0.29
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTTTAA
Found at i:17055049 original size:26 final size:26
Alignment explanation
Indices: 17055020--17055072 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17055010 GTTGACTTAG
17055020 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17055046 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17055072 G
1 G
17055073 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17056012 original size:159 final size:158
Alignment explanation
Indices: 17055723--17056098 Score: 389
Period size: 159 Copynumber: 2.4 Consensus size: 158
17055713 GCGTAATGCC
* * * * * *
17055723 CGCCCGTCCATTCGTTTCGTCGGTTGGCTTAGGCT-TACGGAGTTCAATCCCGGTCTAAGATCAG
1 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGG-TATACGGAGTTCATTCCCAGTCTAAGATCAG
* * * * * *
17055787 ACCAGACTGAGGGTTACGGTAGTAGAATCGACAGCACACAGAGAGGGACCCGGTTGATCCCCGGC
65 ACCAGACCGAGGGTTACGCTAGCAGAATCGACAGCACACAGAGAGGGACACGATCGATCCCCGGC
* ** * * *
17055852 TTATGCATCCCGTCCTTCAGGCCGACTGAG
130 TTACGCATCCCACCCCTCAGACAG-CTGAG
17055882 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGA
1 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGA
* * * ** **
17055947 CCGGACCGAGGGTTGCGCTAGCAGGATCGGTAGCATGCAGAG-GGTGACACGATCGATCCCCGGC
66 CCAGACCGAGGGTTACGCTAGCAGAATCGACAGCACACAGAGAGG-GACACGATCGATCCCCGGC
* * * *
17056011 TTGCGCATCCCACCCCTCTGATAGCTGCG
130 TTACGCATCCCACCCCTCAGACAGCTGAG
* * * * *
17056040 CTCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTAATT-CCAGATCTAAG
1 CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAG-TCTAAG
17056099 CATACGGAGT
Statistics
Matches: 180, Mismatches: 34, Indels: 7
0.81 0.15 0.03
Matches are distributed among these distances:
157 4 0.02
158 56 0.31
159 120 0.67
ACGTcount: A:0.20, C:0.28, G:0.28, T:0.23
Consensus pattern (158 bp):
CGCCCGCCCGTTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGA
CCAGACCGAGGGTTACGCTAGCAGAATCGACAGCACACAGAGAGGGACACGATCGATCCCCGGCT
TACGCATCCCACCCCTCAGACAGCTGAG
Found at i:17056108 original size:26 final size:26
Alignment explanation
Indices: 17056072--17056124 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
17056062 GTTGACTTAG
17056072 GCATACGGAGTTAATT-CCAGATCTAA
1 GCATACGGAGTTAATTCCCAG-TCTAA
*
17056098 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTAATTCCCAGTCTAA
17056124 G
1 G
17056125 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 21 0.84
27 4 0.16
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTAATTCCCAGTCTAA
Found at i:17057455 original size:736 final size:733
Alignment explanation
Indices: 17056048--17057519 Score: 2218
Period size: 736 Copynumber: 2.0 Consensus size: 733
17056038 CGCTCCCGCA
*
17056048 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTAATTCCAGATCTAAGCATACGGAGTTCAT
1 CGCTCGTTTCGTCGGTTGACTTAGGCATACGGAGTTAATTCCAGATCTAAGCATACGGAGTTCAT
** * * *
17056113 TCCCAGTCTAAGATCAGACCAGACCAAGGGTTGTGGCAGCACATGTTGGGCTCGAGCATGTGCTG
66 TCCCAGTCTAAGATCAGACCAGACCAAGGGTTACGACAGCACATGCTGGGCTCGAGCATCTGCTG
17056178 GTGCCGAATTTTTCTTCATCAGGGCACCATCATCAGAGCACCACTGGAGAACCTGACCGGCGGCA
131 GTGCCGAATTTTTCTTCATCAGGGCACCATCATCAGAGCACCACTGGAGAACCTGACCGGCGGCA
* * *
17056243 TTGGGGTTCCGACGATCGAGGGGCGGGGGGTGAGCGCACATGAAGTGCGATGGGTGCTGATACTT
196 CTGGGGTTCCGAAGATCGAGGGGCAGGGGGTGAGCGCACATGAAGTGCGATGGGTGCTGATACTT
* * * *
17056308 GGCCCTTATATTGGCCCCCTATTCGTCATCAAACCACGAGAACTCACACCCCCTTAAGGAGCATT
261 GGCCCTCATATTGGCCCCCTATCCCTCATCAAACCACGAGAACTCACACCCCCTTAAAGAGCATT
*
17056373 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
326 TGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
*
17056438 TGATAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAGTTTTTTGTGCATGCCAACAAAAATAC
391 TGATAACAAAATCTTGTACACTTCGAATTTTTAGCTGAGTTTTTTGTGCATGCCAACAAAAATAC
* * * *
17056503 AAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAACTTTTAAAAAATCTCAAAC
456 AAGGATAACATCTACCAAGTTTGGAGCCAAAAATCCTTCCAAAAAAATTTTAAAAAATCTCAAAC
* **
17056568 CGTAAAACGTTTCAAAAATCGTGAAAAATAAAAAATGAGTTGTCTTGCCACGAAACTTCACGTGA
521 CGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACAAGTTGTCTTGCCACGAAACTTCACGTGA
* * * *
17056633 AGGCTTAGGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGA
586 AGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATGGCATTGGAACACAAAAATATGA
* * *
17056698 AGATGTGCCTAAACCCACCTACTACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCG
651 AGATGTGCCAAAACCCACCTACCACCCTATCGATCCACAGCTTACGCATCCCGTCTCTCTGGCCG
*
17056763 GTGTAGTGCCCGCCCACC
716 GCGTAGTGCCCGCCCACC
* * * * *
17056781 CGCTCGTTTCGTCGGTT-AGCTTAGGCATGCGGAGTTCATTCTCAGA-CTAAGCGTATGGAGTTG
1 CGCTCGTTTCGTCGGTTGA-CTTAGGCATACGGAGTTAATTC-CAGATCTAAGCATACGGAGTTC
* ** * *
17056844 ATTCGCAGTCTAAGATCAGGTCAGACCGAGGGTTACGACAGCACATGCTGGGCTCGAGCATCTGT
64 ATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTACGACAGCACATGCTGGGCTCGAGCATCTGC
* * * * * * *
17056909 TGGTGCCGCATTTTTCTTCGTCAGGGCACCATCGTCGGAGCATC-GTCGGAGAACCTGATCGGCG
129 TGGTGCCGAATTTTTCTTCATCAGGGCACCATCATCAGAGCACCACT-GGAGAACCTGACCGGCG
* * *
17056973 GGACTGGGGTTCCGAAGATCAGGGGGGCCAGGGGGTGTA-CGCACATGATGTGCGATGGGTGCTG
193 GCACTGGGGTTCCGAAGATC-GAGGGG-CAGGGGGTG-AGCGCACATGAAGTGCGATGGGTGCTG
* * * *
17057037 GTACTTGGCTCTCATATTGGCCCCCTATCCCTCATCAAACCTCGGGAACTCACACCCCCTTAAAG
255 ATACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCACGAGAACTCACACCCCCTTAAAG
17057102 AGCATTTGAGATTTTACAGGTTTGCTGCCAAT-GACCATTAAAGTGTCTGAAATGGGGACACTTT
320 AGCATTTGAGATTTTACAGGTTTGCTGCCAATAG-CCATTAAAGTGTCTGAAATGGGGACACTTT
* * *
17057166 TTTCAAATGGTCACAAAATCTTGTACACTTCGAATTTTTAGTTGAGTTTTTTTGTGCATGCCAAC
384 TTTCAAATGATAACAAAATCTTGTACACTTCGAATTTTTAGCTGAG-TTTTTTGTGCATGCCAAC
* *
17057231 AAAAATACAAGGATAACATCTACCAAGTTTGGATCCAAAAATCCTTTCAAAAAAATTTTAAAAAA
448 AAAAATACAAGGATAACATCTACCAAGTTTGGAGCCAAAAATCCTTCCAAAAAAATTTTAAAAAA
* * *
17057296 TC-CTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTTGTCTTGCCATGAAAC
513 TCTC-AAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACAAGTTGTCTTGCCACGAAAC
*
17057360 TTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATGGCATTGGAACGCA
577 TTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATGGCATTGGAACACA
* **
17057425 AAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATTGATCCATGGCTTACGCATCCCGTCT
642 AAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATCGATCCACAGCTTACGCATCCCGTCT
*
17057490 CTCTGGCCGGCGTAGTGCCCGCCCGCC
707 CTCTGGCCGGCGTAGTGCCCGCCCACC
17057517 CGC
1 CGC
17057520 CCATTCGCTC
Statistics
Matches: 663, Mismatches: 67, Indels: 15
0.89 0.09 0.02
Matches are distributed among these distances:
732 2 0.00
733 177 0.27
734 10 0.02
735 193 0.29
736 281 0.42
ACGTcount: A:0.28, C:0.24, G:0.23, T:0.26
Consensus pattern (733 bp):
CGCTCGTTTCGTCGGTTGACTTAGGCATACGGAGTTAATTCCAGATCTAAGCATACGGAGTTCAT
TCCCAGTCTAAGATCAGACCAGACCAAGGGTTACGACAGCACATGCTGGGCTCGAGCATCTGCTG
GTGCCGAATTTTTCTTCATCAGGGCACCATCATCAGAGCACCACTGGAGAACCTGACCGGCGGCA
CTGGGGTTCCGAAGATCGAGGGGCAGGGGGTGAGCGCACATGAAGTGCGATGGGTGCTGATACTT
GGCCCTCATATTGGCCCCCTATCCCTCATCAAACCACGAGAACTCACACCCCCTTAAAGAGCATT
TGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
TGATAACAAAATCTTGTACACTTCGAATTTTTAGCTGAGTTTTTTGTGCATGCCAACAAAAATAC
AAGGATAACATCTACCAAGTTTGGAGCCAAAAATCCTTCCAAAAAAATTTTAAAAAATCTCAAAC
CGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACAAGTTGTCTTGCCACGAAACTTCACGTGA
AGGCTTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATGGCATTGGAACACAAAAATATGA
AGATGTGCCAAAACCCACCTACCACCCTATCGATCCACAGCTTACGCATCCCGTCTCTCTGGCCG
GCGTAGTGCCCGCCCACC
Found at i:17057742 original size:26 final size:26
Alignment explanation
Indices: 17057711--17057760 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
17057701 GACTTAGGCG
*
17057711 TACGGAGTTCGTTCCCAGTCTAAGCA
1 TACGGAGTTCATTCCCAGTCTAAGCA
17057737 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGTTCATTCCCAGTCTAAG
17057761 ATCGGACTGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.26, G:0.22, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCTAAGCA
Found at i:17058469 original size:26 final size:26
Alignment explanation
Indices: 17058403--17058472 Score: 113
Period size: 26 Copynumber: 2.7 Consensus size: 26
17058393 GGCAAATGGG
* **
17058403 GTTCATTCCCAGTCAAAGCATATGGA
1 GTTCATTCCCAGTCTAAGCATAAAGA
17058429 GTTCATTCCCAGTCTAAGCATAAAGA
1 GTTCATTCCCAGTCTAAGCATAAAGA
17058455 GTTCATTCCCAGTCTAAG
1 GTTCATTCCCAGTCTAAG
17058473 ATCGGACCGG
Statistics
Matches: 41, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 41 1.00
ACGTcount: A:0.30, C:0.24, G:0.17, T:0.29
Consensus pattern (26 bp):
GTTCATTCCCAGTCTAAGCATAAAGA
Found at i:17059493 original size:185 final size:183
Alignment explanation
Indices: 17059164--17059532 Score: 576
Period size: 185 Copynumber: 2.0 Consensus size: 183
17059154 GTTGGCTTAG
** * * ** *
17059164 GCATACAGAGTTCATTCCCAGTCTAAGATTGGATCAGGCCGAGGGTTGTGGCAGCAGGATGGCAG
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCAGGATAGCAG
* ** *
17059229 CACGCAGAGGGGGACCTGGCGATCCCCGGCTTGCGCATCTTACCCCTCTGGCCGGTTGAGCACCC
66 CACGCAGAGGGGGACCTGGCGATCCCCAGCTTGCGCATCCCACCCCTCTGGCCGGTTGAACACCC
* *
17059294 GCACGCTTGTTTCGTGGGTTGACTTAGGCAAATGGAGTTCATTCCCAGTCTAA
131 GCACGCTCGTTTCGTGGGTTGACTTAGGCAAACGGAGTTCATTCCCAGTCTAA
17059347 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCAGGACTAGCA
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCAGGA-TAGCA
* *
17059412 GCACGCAGAGGGGGACCTGGCTGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAACGC
65 GCACGCAGAGGGGGACCTGGC-GATCCCCAGCTTGCGCATCCCACCCCTCTGGCCGGTTGAACAC
*
17059477 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
129 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCAAACGGAGTTCATTCCCAGTCTAA
17059532 G
1 G
17059533 ATCGGGCCGG
Statistics
Matches: 168, Mismatches: 16, Indels: 2
0.90 0.09 0.01
Matches are distributed among these distances:
183 53 0.32
184 25 0.15
185 90 0.54
ACGTcount: A:0.20, C:0.29, G:0.30, T:0.21
Consensus pattern (183 bp):
GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCAGGATAGCAG
CACGCAGAGGGGGACCTGGCGATCCCCAGCTTGCGCATCCCACCCCTCTGGCCGGTTGAACACCC
GCACGCTCGTTTCGTGGGTTGACTTAGGCAAACGGAGTTCATTCCCAGTCTAA
Found at i:17060403 original size:26 final size:26
Alignment explanation
Indices: 17060367--17060419 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17060357 TTTGACTTAG
17060367 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17060393 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17060419 G
1 G
17060420 ATCGAACTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17061261 original size:26 final size:26
Alignment explanation
Indices: 17061225--17061277 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
17061215 GTTGACTTAG
* *
17061225 GCATACAGAGTTAATTCCCAGTCTAA
1 GCATACAGAGTTAATCCCCAATCTAA
* *
17061251 GCATATAGAGTTCATCCCCAATCTAA
1 GCATACAGAGTTAATCCCCAATCTAA
17061277 G
1 G
17061278 ATCGAACCGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.34, C:0.25, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTAATCCCCAATCTAA
Found at i:17062009 original size:26 final size:26
Alignment explanation
Indices: 17061957--17062009 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
17061947 GTTGACTTAG
* * *
17061957 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTACCAATCTAA
*
17061983 GCATACGAAGTTCATTACCAATGTAA
1 GCATACGAAGTTCATTACCAATCTAA
17062009 G
1 G
17062010 ATCGGACCGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.23, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTACCAATCTAA
Found at i:17062569 original size:732 final size:731
Alignment explanation
Indices: 17061153--17062647 Score: 2255
Period size: 732 Copynumber: 2.0 Consensus size: 731
17061143 GGGACCCGAC
* ** * * *
17061153 CGATCCCGACTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCACCGGCACGCTCGTTTTGTGGGTT
1 CGATCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCGCGGGTT
* *
17061218 GACTTAGGCATACAGAGTTAATTCCCAGTCTAAGCATATAGAGTTCATCCCCAATCTAAGATCGA
66 GACTTAGGCATACAGAGTTAATTCCCAGTCTAAGCATAGAGAGTTCATCACCAATCTAAGATCGA
* * *
17061283 ACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGTATTTTTCTTT
131 ACCGGACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTC
* * *** * * *
17061348 GCCGGGGCACCATCGTCGGAGCATCGTTGAAGAACCTGACAGGCGGCATTGGTGTTCCGATGATC
196 ACAGGGGCACCATCGTCGGAGCATCCCAGAAGAACCTGACAGGCGGCATTGGGGATCCGACGATC
*
17061413 GGGGGGGCCGGGGGGGTGTGCGAACATGATGTGCGATGGCTGCTGGTACTTGGCCCTTATATTGG
261 GGGGGGGCCGGGGGGGTGTGCGAACATAATGTGCGATGGCTGCTGGTACTTGGCCCTTATATTGG
* * * * *
17061478 CCCCATATCCTTGATCAAACCTCGATAACTAACAGCCCCTTAAAGAGCATTTGAGATTTTACAAG
326 CCCCATATCCCTCATAAAACCTCGAGAACTAACACCCCCTTAAAGAGCATTTGAGATTTTACAAG
17061543 TTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
391 TTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
** * * * * * *
17061608 TGTACCCTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAACAATACATGTATCACGTCT
456 TGTACAATTTGAGTTTTTAGCTGAAGTTTTTTGTACATGCCAACAAAAATACAAGGATCACATCT
* * * *
17061673 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAATTTTCT
521 ACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCAAACCGAAAAAGTTTCA
** * *
17061738 AAAATGGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGAGACC
586 AAAATCATGAAAAATAGAAAACGAGTCGTCTTCCCATGAAACTTCACATGAAGGCTTAAGAGACC
*
17061803 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAC-AGAAATATGAAGATGTGCCTAAA
651 ATTGTATGAATTTACAAGCCATAAAAACGGCATTGGCACACGA-AAATATGAAGATGTGCCTAAA
17061867 CCCACCAACCACCCTAT
715 CCCACCAACCACCCTAT
17061884 CGATCCACGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCGCGGGT
1 CGATCC-CGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCGCGGGT
* * * *
17061949 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGA-AGTTCATTACCAATGTAAGATC
65 TGACTTAGGCATACAGAGTTAATTCCCAGTCTAAGCATA-GAGAGTTCATCACCAATCTAAGATC
*
17062013 GGACCGGACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCT
129 GAACCGGACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCT
* *
17062078 TCACAGGGGCACCATCG-CTGGAGTATCACCAG-AGAACCTGACCA-GCGGCATTGGGGATCCGG
194 TCACAGGGGCACCATCGTC-GGAGCATC-CCAGAAGAACCTGA-CAGGCGGCATTGGGGATCCGA
* *
17062140 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
256 CGATCGGGGGGGCCGGGGGGGTGTGCGAACATAATGTGCGATGGCTGCTGGTACTTGGCCCTTAT
* * * *
17062204 ATTGGCCCCCTATCCCTCATAAAACCTTGAGAACTCACACCCCCTTAAAGTGCATTTGAGATTTT
321 ATTGGCCCCATATCCCTCATAAAACCTCGAGAACTAACACCCCCTTAAAGAGCATTTGAGATTTT
* * *
17062269 ACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
386 ACAAGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
*
17062334 AATCTTGTACAATTTGAGTTTTTAGCTGAAGTTTTTTGTACATGCCAACAAAAATGCAAGGATCA
451 AATCTTGTACAATTTGAGTTTTTAGCTGAAGTTTTTTGTACATGCCAACAAAAATACAAGGATCA
* *
17062399 CATCTACCAAGTTTGGGGCCAAAACTCTTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAA
516 CATCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCAAACCG-AAAAA
*
17062464 GTTTCAAAAATCATGAAAAATGGAAAACGAGTCGTCTTCCCATGAAACTTCACATGAAGGCTTAA
580 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTCCCATGAAACTTCACATGAAGGCTTAA
* **
17062529 GGGACCATTGTATGAATTTACAAGCCATAAAAACGGCATTGGCATGCGAAAATATGAAGATGTGC
645 GAGACCATTGTATGAATTTACAAGCCATAAAAACGGCATTGGCACACGAAAATATGAAGATGTGC
*
17062594 CTAAACCCACCTACCACCCTAT
710 CTAAACCCACCAACCACCCTAT
* * *
17062616 CGAACCGCGGCTTGCGCATCCCGTCTCTCTGG
1 CGATCC-CGGCTTGCGCATCCCGCCCCTCTGG
17062648 TCGGCGTAGT
Statistics
Matches: 687, Mismatches: 70, Indels: 13
0.89 0.09 0.02
Matches are distributed among these distances:
731 284 0.41
732 398 0.58
733 5 0.01
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.25
Consensus pattern (731 bp):
CGATCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCGCGGGTT
GACTTAGGCATACAGAGTTAATTCCCAGTCTAAGCATAGAGAGTTCATCACCAATCTAAGATCGA
ACCGGACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTC
ACAGGGGCACCATCGTCGGAGCATCCCAGAAGAACCTGACAGGCGGCATTGGGGATCCGACGATC
GGGGGGGCCGGGGGGGTGTGCGAACATAATGTGCGATGGCTGCTGGTACTTGGCCCTTATATTGG
CCCCATATCCCTCATAAAACCTCGAGAACTAACACCCCCTTAAAGAGCATTTGAGATTTTACAAG
TTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
TGTACAATTTGAGTTTTTAGCTGAAGTTTTTTGTACATGCCAACAAAAATACAAGGATCACATCT
ACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCAAACCGAAAAAGTTTCA
AAAATCATGAAAAATAGAAAACGAGTCGTCTTCCCATGAAACTTCACATGAAGGCTTAAGAGACC
ATTGTATGAATTTACAAGCCATAAAAACGGCATTGGCACACGAAAATATGAAGATGTGCCTAAAC
CCACCAACCACCCTAT
Found at i:17062895 original size:26 final size:26
Alignment explanation
Indices: 17062859--17062911 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17062849 GTTGACTTAG
17062859 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17062885 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17062911 G
1 G
17062912 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17063796 original size:26 final size:26
Alignment explanation
Indices: 17063757--17063816 Score: 88
Period size: 26 Copynumber: 2.4 Consensus size: 26
17063747 GTTGACTTAG
*
17063757 GCATATGGACTTCATTCCCAATCTAA
1 GCATACGGACTTCATTCCCAATCTAA
*
17063783 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGACTTCATTCCCAATCTAA
17063809 G-AT-CGGAC
1 GCATACGGAC
17063817 CAAACTGAGG
Statistics
Matches: 31, Mismatches: 3, Indels: 2
0.86 0.08 0.06
Matches are distributed among these distances:
24 4 0.13
25 2 0.06
26 25 0.81
ACGTcount: A:0.30, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACGGACTTCATTCCCAATCTAA
Found at i:17064503 original size:902 final size:897
Alignment explanation
Indices: 17061884--17066602 Score: 6736
Period size: 902 Copynumber: 5.2 Consensus size: 897
17061874 ACCACCCTAT
* * * *
17061884 CGATCCACGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCGCGGGT
1 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGT
* * * *
17061949 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTACCAATGTAAGATCG
66 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
*
17062014 GACCGGACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
131 GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
* ** * * * *
17062079 CA-CAGGGGCACCATCG-CTGGAGTATCACCAGAGAACCTGACC-AGCGGCATTGGGGATCCGGC
196 CATC-GGGGCACCATCGTC-GGAGCATCGTCGGAGAACCTGACCGA-CGGCATTGGGGTTCTGAC
*
17062141 GATCGGGGGGGCCGGGGGGTGTGCGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
258 GATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* * *
17062206 TGGCCCCCTATCCCTCATAAAACCTTGAGAACTCACACCCCCTTAAAGTGCATTTGAGATTTTAC
322 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
*
17062271 AGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
387 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * * * * *
17062336 TCTTGTACAATTTGAGTTTTTAGCTGAAGTTTTTTGTACATGCCAACAAAAATGCAAGGATCACA
452 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACG
* *
17062401 TCTACCAAGTTTGGGGCCAAAACTCTTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGT
517 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGTAAAAAGT
* * *
17062466 TTCAAAAATCATGAAAAATGGAAAACGAGTCGTCTTCCCATGAAACTTCACATGAAGGCTTAAGG
581 TTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
*
17062531 GACCATTGTATGAATTTACAAGCCATAAAAACGGCATTGGCATGC-GAAAATATGAAGATGTGCC
646 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG-AAATATGAAGATGTGCC
* * * *
17062595 TAAACCCACCTACCACCCTATCGAACCGCGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGC
710 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGAGTAGTGC
*
17062660 CCGCCCCCCGCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGTGTTCATTCCCAGTCTA
775 CCG---CCCGCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * ** * **
17062725 AGATAAGATCAGACCGAGGGTTGCGGCAACAAGATCGACAGCATGCAGAGGGGGACCCGGT
837 AGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCCGAC
* * * * * * *
17062786 TGATCCCCGGCTTGCGCATTCTGCCCCTCTGGCCGGTTGAGCACCCGCGCGCTCTTTTCGTTGGT
1 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGT
17062851 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
66 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
* * *
17062916 GACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCACATTTTTCTT
131 GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
* *
17062981 CGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGG-ATTGGGGTT-TCGACGA
196 CATCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCT-GACGA
* * * * *
17063044 TCGGGGGGGCCAGGGGGTGTGCACACATGATGTGCAATGGGTGCTAGTACTTGGCCCTCATATTG
260 TC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
* *
17063109 GCCCCTTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
324 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
* *
17063174 GTTTG-TAGCAAGTAGCCACTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
389 GTTTGCT-GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
* *
17063238 CTTGTACACTTCGAGTTTTTAGCTGAATTTTTCTGTGCATGCCAAAAAAAATACAAGGATCATGT
453 CTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGT
** * * * *
17063303 CTACCAAGTTTGATGCCAAAACTACTTCCAAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGCT
518 CTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC-GAACCGTAAAAAGTT
* * * * *
17063368 TCGAAAATCATAAAAAATAGAAAACAAGTCGTGTTGCCATGAAACTTCACATGAAGGCTTAAGGG
582 TCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
*
17063433 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGTAGATGTGCCTA
647 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTA
* *
17063498 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCACTCTGGCCGGTGTAGTGCCC
712 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGAGTAGTGCCC
* *
17063563 GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGACC
777 GCCCGCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC
* * * * * * *
17063628 AGACCAAACCGAGGGTTGTGGTAGTAGGATCAGTAGCACACAGAGGGGGACCTGAC
842 AGACCAGACCGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCCGAC
* * ** * *
17063684 CGATCCCCAGCTTGCGTATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTTGTTTTGTGAGT
1 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGT
* * * *
17063749 TGACTTAGGCATATGGACTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAATCTAAGATCG
66 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
** * **
17063814 GACCAAACTGAGGGTTGCGGCAGCACATGCTGGGCTCTAGCATGTGTTGGTGCCGCATTTTTCTT
131 GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
* * **
17063879 CGTTGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGATGTTCTGACGAT
196 CATCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCTGACGAT
*
17063944 CGGGGGGTCGGGGTGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTCT-GCCCTTATAT
261 CGGGGGG-C-CGG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACT-TGGCCCTTATAT
*
17064008 TGGCCTCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
322 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* * *
17064073 AGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCTAATAGTCACAAAA
387 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
17064138 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAAATACAAGGATCAC
452 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAAATACAAGGATCAC
* * * **
17064203 ATCTACCAAGTTTGGGGCCAAAACCCCTTCCGAAAAAATTTTAAAAAATCTCGACCCACAAAAAG
516 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGTAAAAAG
* *
17064268 TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAA
580 TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
*
17064333 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTGCC
645 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * *
17064398 TAAACCCACCTACCACCCCATCGATCCATGGCTTGCGCATCTCGTCTCTCTGGCCGGAGTAGTGC
710 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGAGTAGTGC
* * *
17064463 CCGCCCACCCGCCCACTCGATTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
775 CCGCCCGCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* * * * *** *
17064528 TCAGACCAGACCGAGTGTTGTGGCAGTAGGATCGGCAGCACATGGAGGGGGACCCGTC
840 TCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCCGAC
* * * *
17064586 CGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGAATGCTCATTTCGTGGGA
1 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGT
* * * * *
17064651 GGACTTAGGCAAACGGAGTTAATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTG
66 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
* *
17064716 GACCGAACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCACATTTTTCTT
131 GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
* * * * * *
17064781 CACCGGGGCACCATCGTCAGAGCATCGTCGGAGAACCTGACTGGCGGCATTAGGGTTCTGGCGAT
196 CATCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCTGACGAT
*
17064846 CAGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTT-GCCCTTATATTGG
261 C-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
* *
17064910 CCCCCTATGCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCTTTTGAGATTTTACAGG
325 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* * * * *
17064975 TTTGCTGGCAGTAGCCATTAAAGTGTTTAAAATGGGGAGACTTTTTTCAAATGGTCACAAAGTCT
390 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * * * * *
17065040 TGTACACTTCGAGTTTTCAGCTAAATTTTTTTGTGTATGCCAACAAAAATAAAAGGATCATGTCT
455 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCT
17065105 ACCAAGTTTGGGG-CAGAAACTCCTTCCGAAAAAATTTTAAAAAATCCGAACCGTAAAAAGTTTC
520 ACCAAGTTTGGGGCCA-AAACTCCTTCCGAAAAAATTTTAAAAAATCCGAACCGTAAAAAGTTTC
* * * * *
17065169 AAAAATCATGAAAAATTGAAAATGTGTCGTCCTGCCATGAAACTTCACGTGAAAGCTTAAGGGAC
584 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
* *
17065234 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCTGAAATATGAAGATGTGCCCAAA
649 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAA
* * * * *
17065299 CCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTTTGGCCAGCGTCGTGCCCGC
714 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGAGTAGT----GC
* *
17065364 CCGCCCGCCCGCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTT
775 CCGCCCGCCCG-C--CCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* * ** * **
17065429 AGATCGGACCAGACCGATGGTTGCGATAGCAGGATCGGTAGCACGCAGAGGGGGACCTGGT
837 AGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCCGAC
* * * * *
17065490 CGATCCTCGGCTTGCGCATCCCGCCCTTCTGGTCGACTGAGCACCCACACGCTCATTTCGT-GGT
1 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGT
* *
17065554 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGAATATGGAGTTCATTCCCAGTCTAAGATCG
66 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
* * * * * *
17065619 GATCGGACCGAAGGTTACAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCTGTATTTTTCTT
131 GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
* * * * * * *
17065684 CATTGGGGCACCGTCGTCAGAGCATTGTGGGAG-ACTCTGACCGGCGGCATTGGGGTT-TCGATG
196 CATCGGGGCACCATCGTCGGAGCATCGTCGGAGAAC-CTGACCGACGGCATTGGGGTTCT-GACG
*
17065747 ATCGGGCGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGATGGTACTTGGCCCTTATATT
259 ATCGGG-GGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
*
17065812 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAACATTTGAGATTTTACA
323 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
*
17065877 GGTTTGCTGTCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC-AATGGTCACAAAAT
388 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
* * *
17065941 CTTGTACACTTCAAGTTTTTAGCTAAAATTTTTTT-TGCATGCCAATAAAAATACAAGGATCACG
453 CTTGTACACTTCGAGTTTTTAGCT-GAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACG
* *
17066005 TCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAAGTTTAAAAAATCTTGAACCGTAAAAAGT
517 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGTAAAAAGT
*
17066069 TTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAGCTTCACGTGAAGGCTTAAGG
581 TTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * * *
17066134 GACCATTGTATGAATTTACAAGCCATAAAAAAGGCATTGGCATGCAGAAAAATAAAGATGTGCCC
646 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
* * ** *
17066199 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCTCGTCTATCTGG-AAGACGTAGTAC
711 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGA-GTAGTGC
* * * ** * * *
17066263 CTGACCGCCCGCCTGCTAATTTCATCAGTTGGCTTAGGCATACGAAGTTCATTTCCAGTCTAAGA
775 CCGCCCGCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* * * *
17066328 TCGGACCTGACCGAGGGTTGCGGCAGCAGGATCGGTAGCACGTAGAGGGGGACCCAAC
840 TCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCCGAC
* * *
17066386 CAATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGAACCCGCACGCTCATTTCGTGGGT
1 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGT
* * * *
17066451 TGACTTAGGTATACAGAGTTCATTGCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCG
66 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
* * *
17066516 GACCTGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATATGTTGGTGCCGCATTTTTCTT
131 GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
*
17066581 CGTCGGGGCACCATCGTCGGAG
196 CATCGGGGCACCATCGTCGGAG
17066603 AACCTGACCC
Statistics
Matches: 3414, Mismatches: 369, Indels: 73
0.89 0.10 0.02
Matches are distributed among these distances:
896 147 0.04
897 326 0.10
898 388 0.11
899 196 0.06
900 42 0.01
901 706 0.21
902 851 0.25
903 483 0.14
904 275 0.08
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (897 bp):
CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGT
TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
CATCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCTGACGAT
CGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
GTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTA
CCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCGAACCGTAAAAAGTTTCAA
AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACC
CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGAGTAGTGCCCGCCC
GCCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
CAGACCGAGGGTTGCGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCCGAC
Found at i:17067547 original size:236 final size:237
Alignment explanation
Indices: 17067133--17067611 Score: 728
Period size: 236 Copynumber: 2.0 Consensus size: 237
17067123 CACTTTTTTC
* * *
17067133 AAATGGTCACAAAATCTTCTACATTCTGAGTTTTTTGCTGAATTTTTTTGTACATGCCAACAAAA
1 AAATGGTCACAAAATCTTCTACATTCTGAGTTTTTAGCTGAATATTTTTATACATGCCAACAAAA
* * * * * *
17067198 ATACAAGGATCAGGTCTACCAAGTTTGGGGCTAAAACTCCTTTCGAAAAAATTTTAAAAAATCTC
66 ATAAAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTACTTCCGAAAAAATTTAAAAAAATCCC
*
17067263 AAACCGTAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGTCTTGCCAAGAAACTTCAC
131 AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAAGAAACTTCAC
*
17067328 GTCAAGGCTTAATGGACAATTGTATGAATTTACAAGCCATAA
196 GTCAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAA
* * *
17067370 AAATGGTCACAACATCTTGTACACTTC-GAGTTTTTAGCTGAATATTTTTATGCAT-CCAACAAA
1 AAATGGTCACAAAATCTTCTACA-TTCTGAGTTTTTAGCTGAATATTTTTATACATGCCAACAAA
* *
17067433 AATAAAAGGATCACGTCTATCGAGTTTGGGGCTAAAACTACTTCCGAAAAAATTTAAAAAAATCC
65 AATAAAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTACTTCCGAAAAAATTTAAAAAAATCC
** * * *
17067498 CAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAGCGAGTCGTCTTGCCATGAAACTTCA
130 CAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAAGAAACTTCA
* *
17067563 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
195 CGTCAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAA
17067606 AAATGG
1 AAATGG
17067612 CATTGGCATG
Statistics
Matches: 218, Mismatches: 23, Indels: 3
0.89 0.09 0.01
Matches are distributed among these distances:
236 170 0.78
237 45 0.21
238 3 0.01
ACGTcount: A:0.39, C:0.17, G:0.16, T:0.28
Consensus pattern (237 bp):
AAATGGTCACAAAATCTTCTACATTCTGAGTTTTTAGCTGAATATTTTTATACATGCCAACAAAA
ATAAAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTACTTCCGAAAAAATTTAAAAAAATCCC
AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAAGAAACTTCAC
GTCAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAA
Found at i:17067929 original size:26 final size:26
Alignment explanation
Indices: 17067899--17067951 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17067889 GTTGACTTAG
17067899 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
17067925 GCATACGGAGTTCATTTCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17067951 G
1 G
17067952 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17068830 original size:26 final size:26
Alignment explanation
Indices: 17068800--17068850 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
17068790 TGACTTAGGT
*
17068800 ATACGGAGTTCATTCCCAGTCTAAGC
1 ATACGAAGTTCATTCCCAGTCTAAGC
*
17068826 ATACGAAGTTCATTCCTAGTCTAAG
1 ATACGAAGTTCATTCCCAGTCTAAG
17068851 ATCGAACCTG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.24, G:0.18, T:0.29
Consensus pattern (26 bp):
ATACGAAGTTCATTCCCAGTCTAAGC
Found at i:17069896 original size:26 final size:26
Alignment explanation
Indices: 17069866--17069918 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17069856 GTTGACTTAG
17069866 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17069892 GCATACGGAGTTCATTTCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17069918 G
1 G
17069919 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17071718 original size:26 final size:26
Alignment explanation
Indices: 17071682--17071734 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17071672 GTTGACTTAG
17071682 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17071708 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17071734 G
1 G
17071735 ATTAGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17071766 original size:903 final size:900
Alignment explanation
Indices: 17069226--17072373 Score: 4477
Period size: 903 Copynumber: 3.5 Consensus size: 900
17069216 GCTGGACCCC
17069226 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
1 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
17069291 GTTTAGCTGCCAGTAG-CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
66 GTTT-GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
*
17069355 CTTCTACA-TTCTGAGTTTTTAGCTGAATTTTTTTGT-CATGCCAACAAAAATACAAGGATCAGG
130 CTTCTACACTTC-GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATG
* ** *
17069418 T-T--C-AGTTTGGGGCTAAAACTCCTTTCAAAAAAAATTTTAAAAAATCCAAACCGTAAAAAGT
194 TCTACCAAGTTTGGGGCCAAAACTCC-TTCCGAAAAAATTTTAAAAAATCCAAACCGCAAAAAGT
17069479 TTTGAAAA-CAGTGAAAAATAG-AAA-GAGTCCGTCTTGCCAATCGCAAACTTCACGTGAAGGCT
258 TTTGAAAATCAGTGAAAAATAGAAAACGAGT-CGTCTTGCC-AT-G-AAACTTCACGTGAAGGCT
*
17069541 TAAGGGA-CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
319 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATG
* * *
17069605 TGCCTAAACCCACCTACCACCCTATCGATTCACGGCTTGCGTATCCCGTCTTTCTGGCC-AGCGT
384 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGA-CGT
*
17069669 AGT-------GCCCGCCCGCCCGCTCGTTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCA
448 AGTGCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * *
17069727 GTCCAAGATTAGATCGGACCAAGGGTCGCTGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGG
513 GTCTAAGATTAGACCGGACCAAGGGTTGCT-CAGCAGGATCGGCAGCACTCAGAGGGGGACCCGG
* * *
17069792 CCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCAGACTGAGCACCCGCACGCTCGATTCATGGG
577 CCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCATGGG
* *
17069857 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTTCCAGTCTAAGATC
642 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATT
* * * *
17069922 GGACCAGACCGAGGGTTGCGGCAGCAAATGCTAGGCTCGGGCATGTGTTGGTGCCGCATTTTTCT
707 AGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGTTGGTGCCGCATTTTTCT
* * * **
17069987 TCATCGGGGCACCATCGCCAGAGCATCGCCGGAGAAGATGACCGGCGGCATTGGGGTTCCGATGA
772 TCGTCGGGGCACCATCGCCGGAGCATCGCCGGAGAACATGACCGGCGGCATTGGGGTTCCGGCGA
* * * *
17070052 TCAGGGGGGCTGGGGGGGTGTGCGCACTTGATGTGCGATGGGTGCTGGTAGTTGGCACTTATATT
837 TC-GGGGGGC-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
17070117 G
900 G
*
17070118 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCTCCTTAAAGAGCATTTGAGATTTTACAG
1 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
* *
17070183 GTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAACATC
66 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
* * * * *
17070248 TTGTACACTTCGAGTTTTTAGCTGAATATTTTTGTGCAT-CCAACAAAAGTAAAAGGATCACGTC
131 TTCTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTC
* * * *
17070312 AATCGAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTAAAAAATCCCAAACCTCAAAAAG-TT
196 TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CCAAACCGCAAAAAGTTT
* *
17070375 TGAAAAACAGTGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
260 TGAAAATCAGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
* *
17070440 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAAATGTGCCTA
325 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTA
* * **
17070505 AACCCACCTACCACCCTATCGATACACGGCTT-CGCATCCCGTCTCTCTGGCTGGGGTAGTGCCC
390 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--C
* *
17070569 GTCGGCCCACCCGCCTGCTTGCCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCACACGGAGTTCA
453 --C-G----CCCGCC--C--GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * *
17070634 TTCCCAGTCTCAGA-TCGAACCTGACCAAGGGTTG-TGGAAGTAGGATCGGCAGCA-TGCAGAGG
507 TTCCCAGTCTAAGATTAG-ACCGGACCAAGGGTTGCT--CAGCAGGATCGGCAGCACT-CAGAGG
* * * * *
17070696 AGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGATTGAGCACCCGTAGGCTCG
568 GGGACCCGGCCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCG
* * * *
17070761 TTTCGTGGGTTGACTTAGGCGTACGGAGTTCATTCCCAGTGTAAGCATACAGAGTTCATTCCCAG
633 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
* * * * * *
17070826 TCTAAGA-TCGAACCACACTGAGGGTTGCGGTAGCACATGCTGGGATAGAGCATGTGTTGGTGCC
698 TCTAAGATTAG-ACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGTTGGTGCC
* * * *
17070890 GCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGCCGGAGAACTTGACCGACGGCATTGGG
762 GCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCGGAGAACATGACCGGCGGCATTGGG
* *
17070955 GTTCCGGCGATCGGGGTGGCCAGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGC
827 GTTCCGGCGATCGGGG-GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGC
17071020 CCTTATATTG
891 CCTTATATTG
* *
17071030 GCCCCCTATCCCTCATCAAACCTCGAGAACTCAAACCCCCTTAAAGAGCATTTGAGATTTTACAA
1 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
*
17071095 GTTTGCTGCCAGTAGCCATTTAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
66 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
* * * *
17071160 CTGTACACTACGAGTTTTTAGCTGAATTTTTTTGTGCATACCAACAAAAATACAAGGATCATGTC
131 TTCTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTC
* * *
17071225 TACCAAGTTTGCGGCCAAAACTCTTTCCGAAAAAATTTTAAAAAATCACGAACCGCAAAAAGTTT
196 TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CAAACCGCAAAAAGTTT
*
17071290 TGAAAATC-GTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
260 TGAAAATCAGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
17071354 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTA
325 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTA
17071419 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCA
390 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCC-
**
17071484 GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCCAGTCTAA
454 GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
17071549 GATTAGACCGGATCGAGGGTTGCATCAGCAGGATTGGCAGCACTTAGAGGGGGACCTGGTCGATC
519 GATTAGACCGGACCAAGGGTTGC-TCAGCAGGATCGGCAGCACTCAGAGGGGGACCCGGCCGATC
* * * * *
17071614 CCCGGCTTGCGCATCCTGCCCCTCTGGCCGACTGAGCACCCGGATGCTCGTTTCTTGGGTTGACT
583 CCCGACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCATGGGTTGACT
*
17071679 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCG
648 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCA
* * * ** *
17071744 GACCGAGGGTTGCGGCAGCACATGTTCGGGCTCGAGCATTTGTTGGTCCCATATTTTTCTTCGTT
713 GACCGAGGGTTGCGGCAGCACATGCT-GGGCTCGAGCATGTGTTGGTGCCGCATTTTTCTTCGTC
* ** * * * * * *
17071809 GGGGCACCATCGTCGGAGCATCATCGGAGAACCTGACTGGTGGCGTTGGGGTTCTGGCGATCAGG
777 GGGGCACCATCGCCGGAGCATCGCCGGAGAACATGACCGGCGGCATTGGGGTTCCGGCGATCGGG
* * *
17071874 AGGTCGGGGGGCTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTACATTG
842 GGGCCGGGGGG-TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
* *
17071934 G-CCCCTATCCTTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
1 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
* *
17071998 GTTTGCAGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAACGGTCACAAAATC
66 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
*
17072063 TTCTACACTTCGATTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTC
131 TTCTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTC
* * * * *
17072128 TACCAAGATTGGGCCCAAAACTCCTTCTGAAAAAATTTTGAAAAATCTCGAACCGCAAAAAGTTT
196 TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CAAACCGCAAAAAGTTT
** * * *
17072193 CAAAAATCA-TGAAAAATAGAAAACAAGTCGTCTTGGCATGAAACTTTC-GGTGAAGGCTTAAGG
260 TGAAAATCAGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC-TTCACGTGAAGGCTTAAGG
*
17072256 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCT
324 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCT
*
17072321 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGC
389 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
17072374 TGGTGTAGTG
Statistics
Matches: 2020, Mismatches: 184, Indels: 93
0.88 0.08 0.04
Matches are distributed among these distances:
891 11 0.01
892 165 0.08
893 53 0.03
894 112 0.06
895 38 0.02
896 29 0.01
897 4 0.00
903 650 0.32
904 139 0.07
905 2 0.00
907 6 0.00
909 3 0.00
911 3 0.00
912 217 0.11
913 383 0.19
914 170 0.08
915 35 0.02
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (900 bp):
GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
TTCTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTC
TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCAAACCGCAAAAAGTTTT
GAAAATCAGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGAAGATGTGCCTAA
ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCGC
CCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
TTAGACCGGACCAAGGGTTGCTCAGCAGGATCGGCAGCACTCAGAGGGGGACCCGGCCGATCCCC
GACTTGCGCATCCCGCCCCTCTGGCCGACTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAG
GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGAC
CGAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGG
CACCATCGCCGGAGCATCGCCGGAGAACATGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGC
CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
Found at i:17073401 original size:26 final size:26
Alignment explanation
Indices: 17073365--17073414 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
17073355 TGACTTAGGT
*
17073365 ATACGGAGTTCATTCCCAGTCTAAAC
1 ATACGGAGTTCAATCCCAGTCTAAAC
*
17073391 ATACGGAGTTCAATCTCAGTCTAA
1 ATACGGAGTTCAATCCCAGTCTAA
17073415 GATCGGACTG
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.24, G:0.16, T:0.28
Consensus pattern (26 bp):
ATACGGAGTTCAATCCCAGTCTAAAC
Found at i:17074287 original size:26 final size:26
Alignment explanation
Indices: 17074251--17074303 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17074241 GTTGACTTAG
17074251 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17074277 GCATACGGAGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17074303 G
1 G
17074304 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17074643 original size:888 final size:890
Alignment explanation
Indices: 17072501--17090896 Score: 20767
Period size: 888 Copynumber: 20.9 Consensus size: 890
17072491 GTTGACTTAG
* * *
17072501 GCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTT-CTGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGC-GGCAGCACATGCTGG
*
17072565 GCTCGGGCATGTGTTGGTGCCGTATTTTTCTT-----------CAT---CGGAGCATCGCCGGAG
65 GCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAG
** *
17072616 AACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGG-TTAGGGGGTGTGCACACATGATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * * *
17072679 GTGATGGGTGCTGGTACTTGGCCCTTGA-ATTGGCCCCCTATCCCTCACCAAACCTTGAGAACTG
195 GCGATGGGTGCTGGTACTTGGCCCTT-ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
17072743 ACACCCCTTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTGAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
17072808 ATGGGGACACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTTTT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * *
17072873 TGTGCATGCTAACAAAAATACAAGGATCAC-GTCTACCAAGTTTGGGGCCAAAACTCGTTCCAAA
389 TGTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * **
17072937 AAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCCAAAATTATGAAAAATAGAAAACGAGTCGT
454 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
17073002 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
519 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
17073067 GCATTGGCATACAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCAT
584 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * *
17073132 GCGCATCTCGTCTCTCTAGCCGACGTAGTGCCCGCCCGCCCACCCGCCCGCTT-GTTTCATCGTT
649 GCGCATCCCGTCTCTCTGGCCGACGTAGT----GCCCG----CCCGCCCGCTTCGTTTCGTCGGT
* * * * *
17073196 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCAGAAGTAG
706 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAG
** ** * *
17073261 GATCGATAGCACATAGAGGGGGACCTGGTCGATCACC-GGCTTGCGCATCCCGCCCCTCTAGCCG
771 GATCGGCAGCACGCAGAGGGGGACCCGGCCGATC-CCTGGCTTGCGCATCCCGCCCCTCT----G
* * * * *
17073325 GCTGAGCACTCGCACGCTCATTTCGTGAGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAA
831 GC--CG-ACT-GCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
17073389 ACATACGGAGTTCAATCTCAGTCTAAGATCGGACTGGACCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * *
17073454 CTCGATCATGTGTTGGTGCCGCATGTTTCTTCGCTGGGGCACCATCGCCGGAGCATCG-CGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
*** *
17073518 ACCTGACCGGTAGCATTGGGGTTCCGACGATCGGGGGGG-TCGGTGGGGGTGTGTGCACATGATG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCT-GG-GGGGGTGTGCGCACATGATG
* *
17073582 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCACCAAACCTCAAGAACTC
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * * * *
17073647 ACACCCCCTTTAAGAGAATTTGAGATTTTACAGGTTTGTTGCCTGTAGCCATTAAAGTGTCTAAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
17073712 ATGGGGACACTTTTTTCTAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
*
17073777 TGTGCATGCCAACAAAAATACAAGGATCACTG-CTACGAAGTTTGGGGCCAAAACTCCTTCCGAA
389 TGTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * *
17073841 AAAATTTAAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGT
454 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
17073906 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATG
519 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
**
17073971 GCATTGAAATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
584 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * *
17074036 GCGCATCCCATCTCTCTGGCCGACGTAGTGCCCGCCCGTCCG-TTCATTTCGCCGGTTGGCTTAG
649 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTTCGTTTCGTCGGTTGGCTTAG
* * *
17074100 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCAAGGGTTGCGGTAGTAGGATCGGCA
714 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGGCA
*
17074165 GCACGCAGAGGGGGACCCGGCCGATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGACTGCACAC
779 GCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACTGCACAC
*
17074230 TCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
844 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
17074277 GCATACGGAGTTGATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * *
17074342 CTCGGGCTTGTGTTGGTGCCGCATTTTTCTTCGCCGACGCGCCATCGCTGGAGCATCGCCAGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* **
17074407 ACCTGACCGACGGCATTGGGGTTTCGGTGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* *
17074472 CGATGGGTGCTGTTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAATCTCGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
17074537 ACCCCCTTAAAGAGCAATTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAGAGTGTCTAAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
17074602 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
**
17074667 TGCATGCCAACAAAAATACAAGGATCACTG-CTATGAAGTTTGGGGCCAAAACTCCTTCCGAAAA
391 TGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
17074731 AATTTAAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
456 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
17074796 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGC
521 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
** * *
17074861 ATTGAAATGCAGAAATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGTTTGC
586 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
17074926 GCATCCCATCTCTCTGGCCGACGTAGTGCCCGCCCGTCCG-TTCATTTCGCCGGTTGGCTTAGGC
651 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTTCGTTTCGTCGGTTGGCTTAGGC
* * *
17074990 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCAAGGGTTGCGGTAGTAGGATCGGCAGC
716 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGGCAGC
*
17075055 ACGCAGAGGGGGACCCGGCCGATCCCTGACTTGCGCATCCCGCCCCTCTGGCCGACTGCACACTC
781 ACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACTGCACACTC
* *
17075120 GTTTTGCGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
846 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
17075165 GCATACGGAGTTGATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * * *
17075230 CTCGGGCTTGTGTTGGTGCCGCATTTTTCTTCGCCGACGCGCCATCGCTGGAGCATTGCCAGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * * *
17075295 ACCTGACCGACGGCGTTGGGGTTTCGATGATCGGGGGGGCCGGGGGGGTGTGCGCACATTATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* * *
17075360 CGATGGGTGCTGTTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAATCTCAAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
17075425 ACCCCCTTAAAGAGCACTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAGAGTGTCTAAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
17075490 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * * * *
17075555 CGCATGCCACCGAAAATACAAGGATCA-TGTCTACCTAGTTTTGGGCCAAAAATCCTTCCAAAAA
391 TGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
17075619 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGTAAAATAGAAAACGAGTCATCT
456 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
17075684 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
521 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* ** *
17075749 ATTGGCATCCAGAAATATGAAGATGCACCTAAACCCACCTACCACCCTATTGATCCACGGCTTGC
586 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
17075814 GCATCCCGTCTCTCTCGCCGGCATAGTGCCCGCCCGTCCGCCCTCCCGTTCGCCCGCCCGCTCGT
651 GCATCCCGTCTCTCTGGCCGACGTAGT----G--C--CCG-----CC---CGCCCG--C-TTCGT
* * *
17075879 TTCATCGGTTGGTTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-GAACC-AGACTGAGGGT
697 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGA-ACCGAGGGT
* * * * * * * **
17075942 TGTGACAGCAGGATCAGCAGCACACAGAGGGGGACCCAGCCGATTCCC-AGCTTGTGCATCTTGC
760 TGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGA-TCCCTGGCTTGCGCATCCCGC
* * *
17076006 CCCTCTGGCCGGCTGAGCACCCGTACGCTCATTTCGTGGGTTGAATTAGGCATACGGAGTTCATT
824 CCCTCTGGCCGACT--GCA--C--A--CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
17076071 CCCAGTCTAA
881 CCCAGTCTAA
* * * *
17076081 GCATTCGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
17076146 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGCGCACCATCGCCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * *
17076211 ACCTGACCGACGGCATTAGGGTTCCGACGATC-AGGGGGCTGGGGGGCTGTGCGCCCATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* *
17076275 CGATGGGTGCT-GTACTTGGCCCTTATATTGGCCCCTTATCCATCATCAAACCTCGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
17076339 ACCCCCTTCAAGAGCATTTGAGATTTTACAGGCTTGCTGCCAGTAGCCATTAAAGTGTCTAAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
17076404 GGGGATACTTTTGTCAAATGGTCACAAAATCTTGTACAGTTTC-AGTTTTTAGCTGAATTTTTTT
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA-CTTCGAGTTTTTAGCTGAATTTTTTT
* * ** *
17076468 ATGCATGCCAGCAAAAATACAAGGATCAC-GTCTACCAAGTTTGTTGCCAAAACTCCATCCGAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* ** *
17076532 AAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* *
17076597 TTGCCATTAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
17076662 CATTGGCATGCAGAAATATGAAGATATGCCTAAACCTACCTACCACCCTATCGATCCACGACTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
17076727 CACATCCCGTCTCTTTGGCCGACGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCGTTGGTTGGCTT
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-CT--TCGTTTCGTCGGTTGGCTT
* * * * * ** *
17076792 AGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGATTGCAGCAATAGGATCAG
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGG
* ** * * * * *
17076857 CAGCACACAGAGGGGGACCCGATCGATTCCC-GACTTGTGCATCCCACCCCTCTGGCTGGCTGAG
777 CAGCACGCAGAGGGGGACCCGGCCGA-TCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACT--G
* * *
17076921 CACCCGTACGCTCGTTTCGTGGCTTGACTTAGGCATATGGAGTTAATTCCCAGTCTAA
839 CA--C--A--CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** *
17076979 GCATACGGTGTTCATTCCTACACTAAGAT-----TGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
**
17077039 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCAT---C---G--T---TAGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* ** * * *
17077093 ACCTAACCGGTGGCATTGGGGTTCTGGCGAT--------C-GGGGGGGTGTACGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* **
17077149 CAAT-GGTGCTGGTACTTGGCCCTTATATTGGTGCCCTATCCCTCATCAAACCTCGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
17077213 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG-CAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
** * *
17077277 GGGGACACTTTTTTTGAATCGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATATTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
17077342 TGCATGCCAACAAAAATACAAGTATCAC-ATCTACCAAGTTTTGGGGCCAAAACT-CTTTCGAAA
391 TGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAG-TTTGGGGCCAAAACTCCTTCCG-AA
* ** * * *
17077405 AAAATTTAAAAAAATCTTGAACCACAAAAAGTTTCAAAAATCATGAAAAATAAAAAATC-AGTCG
454 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA-CGAGTCG
**
17077469 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGATGATTGTATGAATTTACAAGCCATAAAAAT
518 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** * *
17077534 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACGCACCTACCACCCTATCGATCCACGGTT
583 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* ** *
17077599 TGCGCATCCCGTCTCTCTGGCCGATGTAGTGCCAACCCGCCCGC-TCGTTTCATCGGTTGGCTTA
648 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTTCGTTTCGTCGGTTGGCTTA
* ** * *
17077663 GGCATACGGAGTTCATTCCCAGTCAAAGATTGGACCGGACCGAGGGTTGCGACAGCAGGATCGGC
713 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGGC
* ** * * * ** *** ** *
17077728 AACACATAGAGGGGGACCC--AC-A-CGCT--CTTTCG--T-GGGTTGACT-TAGGCATAC-GGA
778 AGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCG-CCCCTCT-GGCCGACTGCA
** * *** * *
17077782 -GTTC-ATTC-CCAG-T--C-TAAGCATACGGAGTTTATTCCCAGTCTAA
841 CACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
17077825 G--T-C---G---A-----A--C------CA-A----ACCGAGGGTTGCAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
17077863 CTCGAGCATATGTTGGTGCCGCATTTTTCTTCTCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * *
17077928 ACCTGACCGGCGGCATTGGGGTTCCGACTATCGGGGGGG-TCGGGGGGTGTGTGCGCACATCATG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCT-GGGGGG-GTGTGCGCACATGATG
* * *
17077992 TACGATGGGTGCTGGTACCTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTC
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
17078057 ACA-TCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * * *
17078121 ATGAGGACATTTTTTTCAAATGGTCACAAAATCTTGTACCCTTCGAGTTTTTAGCTGACTTTTTT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* *
17078186 TGTGCATGCCAAAAAAAATACAAGGATCAC-GTCTACCAAGTTTGGGG-CAAAACTCCTTTCG-A
389 TGTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * * *
17078248 AAAATGTTAAAAAATCTCGAACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTGGT
454 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
17078313 CTTGCCATGAAACTTCACATGAAGGCTTGAGGAACCATTGTATGAATTTACAAGCCATAAAAATG
519 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * * *
17078378 GCATTGGCACGGAAAAATATGAAGATGTGCCTAAACCCACGTACCACCCTATCGATCCACGGTTT
584 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
17078443 ACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGGCCGTCCGGCCGCCCGCTT-GTTTTGTCGGT
649 GCGCATCCCGTCTCTCTGGCCGACGTAGTG--C--CCG--C--CCGCCCGCTTCGTTTCGTCGGT
* * * * *
17078507 TGCCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGATCGAGGGTTGCGACAGCAG
706 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAG
* * * * * * **
17078572 GATCAGCAACACGTAGAGGGGGACTCGGTCAAT-CCTCGGCTTGCGCATCCTTCCCCTCTAGGCG
771 GATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCT-GGCTTGCGCATCCCGCCCCTCT-GGC-
* * * * * *
17078636 GCTGAGCGCCCGCACGCTCGTTTCTTGGGTTGACTTAGGCATATGGAGTTCATTCTCAGTCCAA
833 -C-GA----CTGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
17078700 GCATACGGAGTTCATTCCCAATCTAAGATCAGATCGGACCGAGGGTTACGGGAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
17078765 CTCGGACATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * *
17078830 ACCTGACCGATGGCATCGGGGTTCCGACGATCGGGGGGGTCGGGTGGGGGTGTGCACACATGATG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-CTGG-GGGGGTGTGCGCACATGATG
* * * *
17078895 TGTGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCCTATCCCTCATCAAACATCCAGAACTC
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
17078960 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACTAGTAGCCATTAAAGTGTCCGAA
259 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
17079025 ATGGGGACACTTTTTTCAAATGGTCACGAAATCTTGTACCCTTCGAGTGTTTAGCTGAATTTTTT
324 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
17079090 TGTGCATGCCAA-AAAAATTTCAAGGATCAC-CTCTACCAAGTTTGGGTCCAAAATTCCTTCCGA
389 TGTGCATGCCAACAAAAA-TACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * *
17079153 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCATAAATCGTGAAAAATAAAAAACGAGTCG
453 AAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
*
17079218 TCTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
518 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** **
17079283 GGCATT-GCAACCAGAAATATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCCACGGCT
583 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
17079347 TGCGCATCCTGTCTCTCTGGCC-AGCGTAGTGCCTGCCCGCCCGC-TCATTTCGTAGGTTGGCTT
648 TGCGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCTTCGTTTCGTCGGTTGGCTT
* * ** * * * *
17079410 AGGCATACAGAGTTCATTCACAGTCTAAGATTGGATCGAACTGAGAGTTGTGGCAGCAGGATCGG
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGG
* * * * * *
17079475 CAGCACGTAGAGGGGGACCTGACCAATCCCCGGC-TACGCATCCCGCCCCTCTGGCCGGTCGAGC
777 CAGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGG-C---C--G-
* *
17079539 ACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T--
835 A-CTGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
17079592 -C-TA---AG---------A-TC-AA-ATC--A---GACCGAGGGTTGCAGCAGCACATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** *
17079635 CTCGGCCATATGTTGGTGCCGCATTTTTCTTCATCGGGGCACCATCACCGGAGCAAT-GCCGGAG
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGC-ATCGCCGGAG
* * *
17079699 TACCTGATCGACGGCATTGGGGTTCCGACGATCGGGGGGTC-GGGGGGGTGTGCGCACATGATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGT
* *
17079763 GCGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCACTCATCAAACCTGGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
17079827 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCGTTAAAGTGTCTGAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* ** *
17079892 TTGGGACA-TTTTTGGATATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
17079956 ATGCAAGCCAACAAAAATAAAAGGATCAC-GTCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * * *
17080020 AAATTTTCAAAACTCCCGAACTGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
17080085 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAG-C-TAAAAA---
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * * *
17080145 -AATGG---GTAAAAATATGAAGATCTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * **
17080206 CGCATCCCGTCTCTCTAGCCGACGTAGTGCCCGCCCGCCCGCCTGCTCGTTTTGTCCATTGGCTT
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-CT--TCGTTTCGTCGGTTGGCTT
* * * * * *
17080271 AGGCAAACGGAGTTCATTTCTAGTCTAAGATCAGACTGGACTGAGGGTTGCGGCAGC---AT---
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGG
* * * *
17080330 ------GTAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG-AG
777 CAGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACTGCA-
* *** * * *
17080388 CAC-C-TGTACGCCCG-T---TT---CGT--GG-GTTGA----C--T-TAG
841 CACTCGT-TTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * **
17080420 GCAAACGAAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * **
17080485 CTCAGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGTTGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * * * * ** * *
17080550 ACTTGACCGGCGACATTAGGGTTCTGGCG-TTTGGGGGGCCGGAGGGG-GTGCGCACAAATGATG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCAC--ATGATG
*
17080613 TGCGATGGGTGCTGGTACTTGG-CCTGTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
194 TGCGATGGGTGCTGGTACTTGGCCCT-TATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
17080677 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
258 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17080742 AATGGGGACACTTTTTTCAAATGGTCAGAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTT
323 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
17080807 TTGTGCATGCCAAAAAAAATACAAGGATCAC-GTCTACCAAGTTTGGGGCGAATACTCCTTCCGA
388 TTGTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* *** ** * ** * *
17080871 AAAAATTTTAAAAAATCCCAAACCATGAAAAGTTTTGAAAATCGTGAGAAGCAGAAAATGAGTCA
453 AAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* * * *
17080936 TCTTCCCATTAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAATCCATAAAAAT
518 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
17081001 GGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTACCGATCCACGGCT
583 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * *
17081066 TGTGCATTCGGTCTCTCTGGTCGGCATAGTGCCCGTCGCCCTGCCCGTCCGTCCGCTCGTTTCGT
648 TGCGCATCCCGTCTCTCTGGCCGACGTAGTG-CC--CGCCC-GCCCG--C-T----TCGTTTCGT
* * ** * * *
17081131 CCGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACTGGACCGAGGGTTGTGGCA
702 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCA
* * * * * * * * *
17081196 GCAGGATCGGTAGCACGTAGAGGGGGACCTGGTCGATCCCCGTCTTGCACATCCCGCCCATTTGG
767 GCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGG
* * ** * * * *
17081261 CCGACTG-ACCGCCCG-CACGCT-CG-T---TT---CGT--GG-GTTGA----C--T-TAG
832 CCGACTGCA-CACTCGTTTCG-TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
17081302 GCATACGGAGTTCATTCCCAGTCTAGGAT-AGGACCGGACCGAGGGTTACGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCA-GACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * * * * *
17081366 GCTCGAGCATGTGCTGGTGCCTCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATTGCCGGAG
65 GCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAG
* * *
17081431 AACCTGAACGACGGCTTTGGGGTTCCGACGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * *
17081495 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACATCGAGAACTCG
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
17081560 CACCCCCTTAAAGAGAATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * *
17081625 TGGGGACACTTTTTTCAAATTGTCAGAAAATCTTGTACACTTCGAGTTTTTAACTGAATTGTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
17081690 GTGCATGCCAACAAAAATACAAGGATCA-TGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * *
17081754 AAATGTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
17081819 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGA
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
17081884 CATTTGCACGCAGAAATTTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* ** * *
17081949 TGCATCTTGTCTCTCTGGCCGGCGTAGTGCCCGATCGCTCGCCTGCTCGCTT-GTTTCATCGGTT
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG--C-C-CG-C--C-CGCTTCGTTTCGTCGGTT
* * *
17082013 GGCTTAGGCATATGGAGTTCCATTCCCAGTCTAAGATCAGATC-AGACTGAGGGTTGCGGCAGCA
707 GGCTTAGGCATACGGAGTT-CATTCCCAGTCTAAGATCAGACCGA-ACCGAGGGTTGCGGCAGCA
* ** * * * * *
17082077 GGATTGGTGGCACGTAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCACCCTTCTAGCCG
770 GGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCG
** * ** * * * *
17082142 GTTG-AGCACCCG-CACGCT-CG-T---TT---CGT--GGA-TTGA----C--T-TAG
835 ACTGCA-CACTCGTTTCG-TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* ** * * *
17082180 GCATACGGAGTTCATTCCCAGTCTAAGCTTGGACCGGACCGAGGGTTACGTCAGCACATGCTGGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
17082245 CTCGAGCATGTGCTGGTGCCACATTTTTCTTC-CTCGGGACACCATCGCCGGAGCATCGTCGGAG
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGC-CGGGGCACCATCGCCGGAGCATCGCCGGAG
* * * * * *
17082309 AACCTAACCGAAGGCATTAGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCACACATTATGT
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * *
17082374 GTGATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
17082439 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
17082504 TGGGGACACTTTTTTGAAATGGACACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
17082569 GTGCATGCCAAAAAAAATACAAGGATCAC-GTCTACCAAGTTTGGGACCAAAACTCCTTCTGAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * * * *
17082633 AAATTTTAATAAATCCCGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAGGAAACAAGTCGCC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
17082698 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* ** * *
17082763 CATTGGTACACAGAAATATGAAGATGTGCCTAAACCCACCTACCAGCCTATTGATCCACGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
17082828 CACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCCGCTT-GTTTCGTCGGTTGGCTTAGG
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTTCGTTTCGTCGGTTGGCTTAGG
* * * * **
17082892 TATACAGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGTGTTGTGGCAGCAGGATTAGCAG
715 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGGCAG
* * * *
17082957 CACGCAGAGGGGGACCTGACCTATCCAC-GGCTTGCGCATCCCGCCCCTATGGCCAGCTGAGGGC
780 CACGCAGAGGGGGACCCGGCCGATCC-CTGGCTTGCGCATCCCGCCCCTCTGG-C--C-GA----
** * * * *
17083021 CTGCATGCTCGTCTCATAGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAA
836 CTGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *** * *
17083076 GCATAGGGAGTTCATTCCCAGTCTAAGATCGGATTAGATCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
17083141 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCTCCGGGGCACCATCGCCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * *
17083206 ACCTGACCGACGGCATTGGGGTTCCAACGATC-GGGGGGC-CGGGGGTTGTGCGCACGTGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* * *
17083269 CAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCAT
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
17083334 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTTCTGCCAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
17083399 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * *
17083464 TGCATGCCAACAAAAATACAAGGATC-CTCTCTACCAGGTTTGGTGG-TAAAACTCCTTCCAAAA
391 TGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGG-GGCCAAAACTCCTTCCGAAA
* * * ** * *
17083527 AAATTTAAAAAAATTCCAAATTGTAAAAAGTTTCAAAAATCGTTAAAAATAGAAAACGAGTCGTC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
17083592 TTGCCATGAAACTTCACGTGAAGGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
17083657 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * **
17083722 TGCATCCCGTCTCTCTGGCCGACGTTGTGCCCACCCGCCCACTCGCCCGC-TCGTTTTC-TCAAT
650 CGCATCCCGTCTCTCTGGCCGACGTAGTG----CCCG--C-C-CGCCCGCTTCG-TTTCGTCGGT
* * * *
17083785 TGGCTTAGGCATACAGGAGTTTATTCCCAGTCTAAGATCAGACC-AGACCGAGGGTTACAGTAGC
706 TGGCTTAGGCATAC-GGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACCGAGGGTTGCGGCAGC
* ** ** * * * **
17083849 AGGATCGCCAGCTTGCAGAGGGGGACCCCACTGAT-CCTCGACTTGCGCATCTCGCCATTCTGGC
769 AGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCT-GGCTTGCGCATCCCGCCCCTCTGGC
* *
17083913 CGGCTGAGCACCCGTACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTA
833 CGACT--G----C--ACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
17083978 A
890 A
* * * *
17083979 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCGGTAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
17084044 CTCGAG-ATGTGTTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGCCGGATCATCGTCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * * * * *
17084108 ACTTGACCGACGGCATTGGGGTTCGGGCAATCGGGGGGGC-CGGGGGGCGTGCGCACATGATGTT
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
** *
17084172 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCATGCCTCAAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
17084237 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
17084302 GGGGACACTTTTTTCAAATGGTCACAAAATATTCTACAGTTCGAGTTTTTAGCTGAATTTTTTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * * * **
17084367 TGCATGCCCA-AAAAATACAAGGATGAC-GTCTGCCAAATTTAGGGCTAAAACTCCTTTTGAAAA
391 TGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * ** * *
17084430 TATTTAAAAAAATCTTGAACCGTC-GAAAGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTC
456 AATTTTAAAAAATCCCGAACCG-CAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * *
17084494 CTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGTCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
17084559 CATTGGCACGCAGAAATATGAAGATGTGCCTAGACCCACCTACCACCCTATCGATCCACGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
17084624 CGCATCTCGTC-CTCTGGCCGGCGTAGTGCCCGCCCGCCCACCCACCCTTTCGTTTCGTCGGTTG
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-----CC-CGC-TTCGTTTCGTCGGTTG
** * * ** * *
17084688 GCTTAGGCACGCGAAGTTCATTCCCAATCTAAGATTGGACCAAACCGAGGGTTGCGACAGCAGGA
708 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGA
* * * ** *
17084753 TCGACAGCATGCAGAGGGGGACCC-GCC---CCTCTGG-TCG-GC-T---G-AGCAC---CCG--
773 TCGGCAGCACGCAGAGGGGGACCCGGCCGATCC-CTGGCTTGCGCATCCCGCCCCTCTGGCCGAC
* * * ** * *
17084802 T--ACACTCGTTTCATGGGTTGACTTCGCCATATAGAGTTAATTCCCAATCTAA
837 TGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
17084854 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAACACATGCTTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
17084919 CTCGGGCATGTGTTGGTGCCACATTTTTCTTCACCGGGGCACCATCGTCGGAGCTTCGCAGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * * * * *
17084984 ACCCGACTGGCGGCATTGGGGTTCCGGCGATCAGGGGGGCCAGGGGGGGTGTTCGCACATGATGT
131 ACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * * * *
17085049 GTGATAGGTGTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCTAGAACTCT
195 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * * *
17085114 CACCTCCTTAAAGAGCATTTCAGATTTTATAGGTTTGCTGCCAATAGCCATTAAAGTGTCTAAAA
260 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
17085179 TGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTGTTTT
325 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * **
17085244 GTGCATGCCAACAAAAATACAAGGATCAC-ATCTACCAAGTTTGGGGCCAAAAGTACTTTTGAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* *
17085308 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
17085373 TTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
17085438 CATTGGCATGCAAAAATATGAAGATGTGCATAAACCCACCTACCATCCTATCGATCCACGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * *
17085503 CGCATCCCGTCTCTCTGGTCGGCATAATGCCCGCCCGCCCGCCTGCCCGCTTGTTTCGTCGGTTG
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-CT------TCGTTTCGTCGGTTG
* * * * * *
17085568 GCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACTGGACCGAGGGTTGCGACAGCAGGG
708 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGA
* * * * * * * ** ** * *
17085633 TCGGCA-C-C-C------GTACAC--TCGTTTCGTGGGTT-AAC-T-TTG-CCATAC--G--GAG
773 TCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCT-CTGGCCGAC
* *** * * *
17085679 T-TA-A-----TTC-CCAG-T--C-TAAGCATACGAAGTTGATTCCCAGTCTAA
837 TGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
17085721 G-AT-C-G-G---A-T-------------CA-A----ACCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * ** * * * * * *
17085760 CTCGAGCATGTGCGGGTACCGTATTTTTCTTCATCGAGGAACCGTCGTCGGAGCATCACTGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * *
17085825 ACCTGACCGACGGCATTGGGGTTCCGATGATC-GGGGGGC-CGGGGGGTGTACGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* * * * *
17085888 CGATGGCTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCACCAAACCTTGAGAACTCAA
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
17085953 ACCCCCTTAAAGAGCATCTGAGATTTTACAGGTTCGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
17086018 GGGGACAC-TTTTTGAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTT
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
* *
17086082 ATGCATGCCAACAAAAATACAAGGATCAC-GTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * *
17086146 AAATTTTAAAAAATCCCGAATCGCAAAAAGTTTCAAAAATCATGAAAAATTGAAAACGAGTCATC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
17086211 TTGCGATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
** *
17086276 CATTGGCACACAGAAATATGAAGATGTGTCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * *
17086341 TGCAT-CCGATCTCTCTGGCCGGCGTAGTGCCCGCCCTCCCACCCGC-TCGTTTCATCGGTTGGC
650 CGCATCCCG-TCTCTCTGGCCGACGTAGTGCCCG----CCCGCCCGCTTCGTTTCGTCGGTTGGC
* ** * * * * *
17086404 TTAGGCATACGGAGTTCATTCCCATTCTAAGATGGGACCGGACAGAGGGTT-AGGTAGTAGGATC
710 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATC
* ** ** * * * * **
17086468 GGTAGTGCATAGAGGGGGACCCACGCCGATCCCCGGCGTGCGCATACATCCCCTCTGGCCGACTG
775 GGCAGCACGCAGAGGGGGACCC-GGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACT-
* * * *
17086533 AGCGCCCGCACGCTCATTTCGTGGGTTGACTTAAGCATACGAAGTTCATTCCCAGTCTAA
838 -------GCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * ** *
17086593 GCATATGGAGTTGATTCCCAGTCTAAGATCGGATCAGATTGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** *** * ** * * * * * *
17086658 CTCAAGCATGTACGGGTACCATATTTTTCTTCACTGAGGAACCATCGTCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * * *
17086723 ACCTGACCGACAGCATTGGGGTTCCGACGA-CCGGGGGGCCGGGGGGATGTGCACACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* *
17086787 CGATGGGTGCTGGTACTTGGCCCTTATATTGTCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
17086852 CCCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCTGTAGCCAATAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
17086917 GGGGACACTTTTTACAAATGGTCACAAAATCTTGTGCACTTCAAGTTTTTAGCTGAAGGTTTTTT
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
* * * * *
17086982 ATGCATGCCAACAAAACTACAAGGATCAC-GTCTACCAAGTTTGGGGCTAAAACTCCTTTCAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* *
17087046 AAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
17087111 TTGCGATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*
17087176 CATTGGCATGCAGAAATATGAAAGATGTGCCTAAACCCACCTACCACCCTCTCGATCCACGGCTT
585 CATTGGCATGCAGAAATATG-AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
17087241 GCGCATCCCGTCTCTTTGGCCGGCGTAGTGCCCGCCCGCCCGCCCACTCGTTTCGTCGGTTGGCT
649 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG--C-TTCGTTTCGTCGGTTGGCT
* * ** * * *
17087306 TAGGCATATGGAGTTCATTCCTAGTCTAAGATGGGACCAAACAGAGGGTTGCGGTAGCAGGATCG
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCG
* * * * * * * **
17087371 GCAGCGCACAAAGGGCCGACCCGCGCCGATCCCCGGCTTGCACATACATCCCCTCTGGCGGACTG
776 GCAGCACGCAGAGGG-GGACCCG-GCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGC---C-G
* *
17087436 AGCGCCTGCACGCTCGTTTCGTGGGTTGACTTAAGCATACGGAGTTCATTCCCAGTCTAA
835 A----CTGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * * *
17087496 GCATATAGAGTTCATTCCCAGTCTATGATCAGACCAGACCGAGGGTTACGTCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * ** * *
17087561 ATTGGGCATGTGCTGGTGCCACATTTTTCTTCGCTGGGGCACCATCATCGGAGCATCGTCGAAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* * * *
17087626 ACCTGATCGACGGCATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGGTGTGCACACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* * *
17087691 CGATGGGTGCTGGTACTTGGCCCTTAAATTGGCCCCCTATCCCTCATGAAACCTTGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
17087756 CCCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCTGTAGCCAATAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
17087821 GGGGACACTTTTTACAAATGGTCACAAAATCTTGTGCACTTCAAGTTTTTAGCTGAAGTTTTTTT
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
* * * * *
17087886 ATGCATGCCAACAAAACTACAAGGATCAC-GTCTACCAAGTTTGGGGCTAAAACTCCTTTCAAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* *
17087950 AAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
17088015 TTGCGATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
17088080 CATTGGCACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
17088145 CGCATCCGGTCTCTTTGGCCGGCGTAGTGCCCGCCCTCCCACCCGC-TAGTTTCATCGGTTGGCT
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG----CCCGCCCGCTTCGTTTCGTCGGTTGGCT
* * * * *
17088209 TAGGCATA-AGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCATGATCG
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCG
* * * * * * *
17088273 ACAGCATGCAGAGAGGCACCCGACCGAT-CCTCGGCTTGCGCATCCCACCCCTTTGGCCGACTG-
776 GCAGCACGCAGAGGGGGACCCGGCCGATCCCT-GGCTTGCGCATCCCGCCCCTCTGGCCGACTGC
* * * * * * * * *
17088336 AGCGCCCG---CAT-GCTCG--TT--TCGT--GG-GTTGA----C--T-TAG
840 A-CACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
17088370 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCATAGGCTGGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGG-
* * * ** *
17088435 GCTCGGGCATGTGCTGGTGCCGCA-TTTTCTTCGTCGGGGCACCATCACCGGAGCATCATCGTAG
65 GCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAG
* ** * *
17088499 AACCTGACCGACGGCATTGGGGATCCGGTGATCGGGGGGG-TCGGTGGGGTGTGCACACATGATG
130 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCT-GGGGGGGTGTGCGCACATGATG
* * * *
17088563 TGTGATGGGTGCTGGTACTTGGCCCTTATATCGGCCCTCTATCCCTCATCAAACCTCTAGAA-TG
194 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT-
* *
17088627 CAC-CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCCGTAGCCATTAAATTGTCTGA
258 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * *
17088691 AATGGGAACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
323 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * ** *
17088756 TTGTGCATGCCAAAAAAAATACAAGGATCAC-ATCTACCAAGTTTGGGGTGAAAACTCCTTCCAA
388 TTGTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * ** *
17088820 AAAAAATTTAAAAAATCCCAAACCGTAAAAAGTTTTGAAAATAGTGAAAAATAGAAAACGAGTCG
453 AAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* *
17088885 TCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCGTTGTATGAATTTACAAGCCATAAAAAT
518 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
17088950 GGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCTTATCGATCCACGGCT
583 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
17089015 TGCGCATCTCGTCTCTCTGGCC-AGCATAGTGCTTTCCCGCCCGCCCGTCCACCCGCTCGTTTCA
648 TGCGCATCCCGTCTCTCTGGCCGA-CGTAGTG----CCCGCCCGCCCG------C-TTCGTTTCG
* * * ** * * * *
17089079 TCGGTTGGCTTAGGCATACAGAGTTTATTCCTAGTCTAAGATTGGACCGGACGGAGTGTTGTGGC
701 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGC
* * ** * * * *
17089144 TGTAGGATCGATAGCATGAAGAGGGGGGCCCGGCCGATCCCTGGCTTGCGCATCTCGCCCCTCTG
766 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTG
* * * *
17089209 GCCGGCTGAGCACCCGCATGCTCATTTCGTGGGTTGACTTAGCCATATGGAGTTCATTCCCAGTC
831 GCCGACT--GCA----CA--CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
17089274 TAA
888 TAA
* * * * *
17089277 GCATAGGGAGTTCATTCCCAGTCTAATATCAGACCAGACCAAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
17089342 CTCGGCCATGTGCTGCTGCCGCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCG-CGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* *
17089406 ACCTGACCGACGGCTTTGGGGTTCCGACGATC-GGGGGGC---CGGGGTGTGCGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* *
17089467 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCGTCAAACCTCAAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
17089532 ACCCCCTTAAAGAGCATTTGAG-TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
17089596 GGGGACACTTTATTCAATTGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTA
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * *
17089661 TGCGTGCCAATAAAAATACATGGATCAC-GTCTACCAAGTTTGGGGCCAAAACTCATTCCGAAGA
391 TGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
17089725 AATTTTAAAAAATCTCGAACCGCAAAAAGTTTCGAAAGTCGTGAAAAATAGAAAATGAGTCGTCT
456 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
17089790 TGCCATGAAACTTCACGTGAA-GCTCTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
521 TGCCATGAAACTTCACGTGAAGGCT-TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
17089854 CATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
17089919 CGCATCCCGTCACTCTGGCCGACGTAGTGCCCGCCTGCCCGCCCGC-TCGTTTCGTCGTTTGGCT
650 CGCATCCCGTCTCTCTGGCCGACGTAGTG--C-CC-GCCCGCCCGCTTCGTTTCGTCGGTTGGCT
* * * * *
17089983 TAGGCATACGGAGTTCATTCCCAGTCTAAGCTTAGACCGGACTGAGGGTTGCAGCAGCAGGATCG
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCG
** * ** ** * *
17090048 ATAGCAAGCAGAGGAAGACCCGATCGAT-CCTCGGCTTGGGCATCCCGCCCCTTTGGTCGGCTGA
776 GCAGCACGCAGAGGGGGACCCGGCCGATCCCT-GGCTTGCGCATCCCGCCCCTCTGG-C--C-GA
* *
17090112 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 ----CTGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
17090171 GCATATGGAGTTCACTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
17090236 CTAGAGCATGTGATGGTACCG---TATT-TT-------------T--------CAT---------
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
* *
17090267 --C--ACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGTGGTGTGCGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* * *
17090328 CGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTTGAGAACTCAC
196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
17090393 ACCCCCTTAAAGAGCATCTGAGATTTTACAGGTTCGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
17090458 GGGGACACTTTTTTCTAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTT
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
* * * * * * *
17090523 ATGCGTGCCAACAAAAATACAAGGATCA-AGTCTGCCAAGTTTGGGGCCAAAACTCGTTTCTAAA
390 GTGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * * *
17090587 AAATTTTTAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATC
455 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * *
17090652 TTGCGATGAAACTTCACGTGAAGGGTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGG
520 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
17090717 CATTGGCATACAGAAATATGAAGATGTGTCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
585 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * *
17090782 CGTATCCCGTCTCTCTGGCCGGCGTAGTG--C-CCC-CCCGC-TCGTTTCAT-GTGTTGACTTAG
650 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTTCGTTTCGTCG-GTTGGCTTAG
* * * *
17090841 GCATACGGAGCTCATTCCCAGTCTAAGATCAGA-CTAGACCGAGGGTTTCAGCAGCA
714 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACCGAGGGTTGCGGCAGCA
17090897 CATGCTGGGC
Statistics
Matches: 15268, Mismatches: 1704, Indels: 1105
0.84 0.09 0.06
Matches are distributed among these distances:
824 69 0.00
826 1 0.00
827 2 0.00
829 1 0.00
830 3 0.00
831 4 0.00
832 4 0.00
833 13 0.00
834 63 0.00
835 31 0.00
837 52 0.00
838 414 0.03
839 6 0.00
840 3 0.00
841 111 0.01
842 17 0.00
843 205 0.01
844 17 0.00
845 78 0.01
846 205 0.01
847 4 0.00
848 1 0.00
849 47 0.00
850 130 0.01
851 138 0.01
852 105 0.01
853 209 0.01
854 6 0.00
855 74 0.00
856 3 0.00
857 116 0.01
858 12 0.00
859 13 0.00
860 7 0.00
861 162 0.01
862 175 0.01
863 274 0.02
864 8 0.00
865 216 0.01
866 106 0.01
867 80 0.01
868 8 0.00
869 8 0.00
870 368 0.02
871 44 0.00
872 313 0.02
873 246 0.02
874 548 0.04
875 167 0.01
876 83 0.01
877 45 0.00
878 487 0.03
879 720 0.05
880 126 0.01
881 547 0.04
882 264 0.02
883 14 0.00
884 5 0.00
885 4 0.00
886 4 0.00
887 10 0.00
888 1582 0.10
889 52 0.00
890 8 0.00
891 7 0.00
892 14 0.00
893 82 0.01
894 691 0.05
895 23 0.00
896 342 0.02
897 124 0.01
898 339 0.02
899 163 0.01
900 364 0.02
901 223 0.01
902 987 0.06
903 847 0.06
904 1062 0.07
905 97 0.01
906 185 0.01
907 101 0.01
908 118 0.01
909 4 0.00
910 4 0.00
911 2 0.00
912 1 0.00
914 422 0.03
915 41 0.00
916 187 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (890 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGA
ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTG
CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
TGCATGCCAACAAAAATACAAGGATCACTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTTCGTTTCGTCGGTTGGCTTAGGC
ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCGGCAGC
ACGCAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACTGCACACTC
GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:17075175 original size:26 final size:26
Alignment explanation
Indices: 17075139--17075191 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17075129 GTTGACTTAG
17075139 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17075165 GCATACGGAGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17075191 G
1 G
17075192 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17076084 original size:26 final size:26
Alignment explanation
Indices: 17076055--17076107 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17076045 GTTGAATTAG
17076055 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17076081 GCATTCGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17076107 G
1 G
17076108 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.26, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17077809 original size:26 final size:26
Alignment explanation
Indices: 17077773--17077825 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17077763 GTTGACTTAG
17077773 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17077799 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17077825 G
1 G
17077826 TCGAACCAAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17083080 original size:26 final size:26
Alignment explanation
Indices: 17083050--17083102 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17083040 GTTGACTTAG
*
17083050 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17083076 GCATAGGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17083102 G
1 G
17083103 ATCGGATTAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17083989 original size:26 final size:26
Alignment explanation
Indices: 17083953--17084005 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17083943 GTTGACTTAG
* *
17083953 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17083979 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17084005 G
1 G
17084006 ATCAGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17084306 original size:903 final size:891
Alignment explanation
Indices: 17077755--17112524 Score: 20517
Period size: 902 Copynumber: 38.9 Consensus size: 891
17077745 CCACACGCTC
* * * *
17077755 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTTATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * *
17077820 TCTAAG-TC-GAACCAAACCGAGGGTTGCAGCAGCACATGCTGGGCTCGAGCATATGTTGGTGCC
66 TCTAAGATCAG-ACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCC
* * * *
17077883 GCATTTTTCTTCTCCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGG
129 ACATTTTTCTTCT-CGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * * * ** *
17077948 GTTCCGACTATCGGGGGGGTCGGGGGGTGTGTGCGCACATCATGTACGATGGGTGCTGGTACCTG
193 GTTCCGACGATCGGGGGGGCCAGGGGG-GTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
* * *
17078013 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA-TCCTTTAAAGAGCATTT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* *
17078077 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGAGGACATTTTTTTCAAAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* * * *
17078142 GGTCACAAAATCTTGTACCCTTCGAGTTTTTAGCTGACTTTTTTTGTGCATGCCAAAAAAAATAC
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
*
17078207 AAGGATCACGTCTACCAAGTTTGGGGCAAAACTCCTT-TCG-AAAAATGTT-AAAAAATCTCGAA
452 AAGGATCACGTCTACCAAGTTTGGGCCAAAACTCCTTCT-GAAAAAAT-TTAAAAAAATCTCGAA
* * *
17078269 CTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTGGTCTTGCCATGAAACTTCACATG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* * * *
17078334 AAGGCTTGAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGGAAAAATATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * *
17078399 AAGATGTGCCTAAACCCACGTACCACCCTATCGATCCACGGTTTACGCATCCCGTCTCTCTGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* ** * * *
17078464 GGCGTAGTGCCCGGCCGTCCGGCCGCCCGCTTGTTTTGTCGGTTGCCTTAGGCATACGGAGTTCA
710 GGCGTAGTGCCCGCCCG-CCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
** * * * *
17078529 TTCCCAGTCTAAGATCAGACTGGATCGAGGGTTGCGACAGCAGGATCAGCAACACGTAGAGGGGG
774 TTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG-CAGCAGGATC-GCAGCATGCAGAGGGGG
** * * * * *
17078594 ACTCGGTCAATCCTCGGCTTGCGCATCCTTCCCCTCTAGG-CGGCTGAGCGCCCGCACGCTCG
837 AC-CACT-GATCC-C-GCTTGCGCAT-C--CGCCTCT-GGCCGGCTGAGCACCCGTACACTCG
* * * *
17078656 TTTCTTGGGTTGACTTAGGCATATGGAGTTCATT-CTCAGTCCAAGCATACGGAGTTCATTCCCA
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCT-AGTCTAAGCATACAGAGTTCATTCCCA
* * * * * *
17078720 ATCTAAGATCAGATCGGACCGAGGGTTACGGGAGCACATGTTGGGCTCG-GACATGTGTTGGTGC
65 GTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAG-CATGTGCTGGTGC
* * * * *
17078784 CGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGATGGCATCGG
128 CACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGG
** *
17078849 GGTTCCGACGATCGGGGGGGTCGGGTGGGGGTGTGCACACATGATGTGTGATGGGTGCTGGTACT
192 GGTTCCGACGATCGGGGGGG-CCAG-GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACT
* * *
17078914 TAGCCCTTATATTGGCCCCCTATCCCTCATCAAACATCCAGAACTCACACCCCCTTAAAGAGCAT
255 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
* * *
17078979 TTGAGATTTTACAGGTTTGCTACTAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTTTTCAA
320 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
* * * *
17079044 ATGGTCACGAAATCTTGTACCCTTCGAGTGTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAAT
385 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAA-
* * * * * * *
17079108 TTCAAGGATCACCTCTACCAAGTTTGGGTCCAAAATTCCTTCCGAAAAAATTTTAAAAAATCCCA
449 TACAAGGATCACGTCTACCAAGTTTGGG-CCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCG
* * *
17079173 AACCGTAAAAAGTTTCATAAATCGTGAAAAATAAAAAACGAGTCGTCTCGCCATGAAACTTCACG
513 AACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
17079238 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT-GCAAC-CAGAAAT
578 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC-ACGCAGAAAT
** *
17079301 ATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTG
642 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* * * * *
17079366 GCCAGCGTAGT----GCCTG--C-CCGCCCGCTCATTTCGTAGGTTGGCTTAGGCATACAGAGTT
707 GCCGGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
* ** * * * * * *
17079424 CATTCACAGTCTAAGATTGGATC-GAACTGAGAGTTGTGGCAGCAGGATCGGCAGCACGTAGAGG
772 CATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTG-CGCAGCAGGATC-GCAGCATGCAGAGG
** * * *
17079488 GGGACCTGACCAATCCCCGGC-TACGCATCCCGCCCCTCTGGCCGG-TCGAGCACCCGCACGCTC
834 GGGACC--ACTGAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCGGCT-GAGCACCCGTACACTC
17079551 G
891 G
* *
17079552 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-T--A-AG---------A-
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * *
17079598 TC-AA-AT-----CAGACCGAGGGTTGCAGCAGCACATACTGGGCTCG-GCCATATGTTGGTGCC
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAG-CATGTGCTGGTGCC
* * * * *
17079655 GCATTTTTCTTCATCGGGGCACCATCACCGGAGCAAT-GCCGGAGTACCTGATCGACGGCATTGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGC-ATCGTCGGAGAACCTGACCGACGGCATTGG
* * *
17079719 GGTTCCGACGATC-GGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
192 GGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
* *
17079783 GCCCTTATATTGG-CCCCTATCACTCATCAAACCTGGAGAACTCACACCCCCTTAAAGAGCATTT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* * * ** *
17079847 GAGATTTTACAGGTTTGTTGCCAGTAGCCGTTAAAGTGTCTGAAATTGGGACA-TTTTTGGATAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* * * *
17079911 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCAAGCCAACAAAAATAA
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
* ** * *
17079976 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-TCAAAAAAATTTTCAAAACTCCCGAA
452 AAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCT-GAAAAAATTTAAAAAAATCTCGAA
* *
17080040 CTGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* * * *
17080105 AAGGCTTAAGGGACCATTGTTTGAATTTACAAG-C-TAAAAA----AATGG---GTAAAAATATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * *
17080161 AAGATCTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTAGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * * ** *
17080226 GACGTAGTGCCCGCCCG--C-CCGCCTGCTCGTTTTGTCCATTGGCTTAGGCAAACGGAGTTCAT
710 GGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * ** * *
17080288 TTCTAGTCTAAGATCAGACTGGACTGAGGGTT-----GC--G---GCAGCATGTAGAGGGGGACC
775 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGCAGCAGGATCGCAGCATGCAGAGGGGGACC
* * *
17080343 -CGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCTGTACGCCCG
840 AC--T-GAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
*
17080402 TTTCGTGGGTTGACTTAGG----C--A----A-----A--C---G-----A-AGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * ***
17080441 TCTAAGATCGGACCGGACCGAGGGTTGTAGCAGCACATGCTGGGCTC-AGGCATGTGCTGGTGCC
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGA-GCATGTGCTGGTGCC
* * * * * * *
17080505 ACATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGTTGGAGAACTTGACCGGCGACATTAGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * ** *
17080570 GTTCTGGCG-TTTGGGGGGCC-GGAGGGG-GTGCGCACAAATGATGTGCGATGGGTGCTGGTACT
193 GTTCCGACGATCGGGGGGGCCAGG-GGGGTGTGCGCAC--ATGATGTGTGATGGGTGCTGGTACT
*
17080632 TGG-CCTGTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCA
255 TGGCCCT-TATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
17080696 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
319 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
* * * *
17080761 AATGGTCAGAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAA
384 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAA
* * * * * *
17080826 TACAAGGATCACGTCTACCAAGTTTGGGGCGAATACTCCTTCCGAAAAAATTTTAAAAAATCCCA
449 TACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCG
* * ** * ** * * * * *
17080891 AACCATGAAAAGTTTTGAAAATCGTGAGAAGCAGAAAATGAGTCATCTTCCCATTAAACTTCACA
513 AACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
*
17080956 TGAAGGCTTAAGGGACCATTGTATGAATTTACAATCCATAAAAATGGCATTGGCACGCAGAAATA
578 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATA
* * * *
17081021 TGAAGATGTGCCTAAACCCACCTACCACCCTACCGATCCACGGCTTGTGCATTCGGTCTCTCTGG
643 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
* * * * *
17081086 TCGGCATAGTGCCCGTCGCCCTGCCCGTCCGTCCGCTCGTTTCGTCCGTTGGCTTAGGCATACGG
708 CCGGCGTAGTG-CC--CGCCC-GCCC-ACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* ** ** * * * *
17081151 AGTTCATTCCTAGTCTAAGATTGGACTGGACCGAGGGTTGTGGCAGCAGGATCGGTAGCACGTAG
768 AGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTG-CGCAGCAGGATC-GCAGCATGCAG
** * * * * * * *
17081216 AGGGGGACCTGGTCGATCCCCGTCTTGCACATCCCGCCCATTTGGCCGACTGACCGCCCGCACGC
831 AGGGGGACC-ACT-GAT-CCCG-CTTGCGCAT-CCG-CC-TCTGGCCGGCTGAGCACCCGTACAC
17081281 TCG
889 TCG
* *
17081284 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-T--AG-G---------A-
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* *
17081330 --T-AG----GACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCT
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* * * * * *
17081388 CATTTTTCTTCACCGGGGCACCATCGTCGGAGCATTGCCGGAGAACCTGAACGACGGCTTTGGGG
130 CATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
*
17081453 TTCCGACGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
194 TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
* * *
17081517 CCTTATATTGGCCCCCTATCCCTCATCAAACATCGAGAACTCGCACCCCCTTAAAGAGAATTTGA
259 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
* * *
17081582 GATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATTG
324 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* *
17081647 TCAGAAAATCTTGTACACTTCGAGTTTTTAACTGAATTGTTTTGTGCATGCCAACAAAAATACAA
389 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAA
* * *
17081712 GGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATGTT-AAAAAATCCCGAACC
454 GGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAAT-TTAAAAAAATCTCGAACC
*
17081776 GTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
517 GTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* * *
17081841 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGACATTTGCACGCAGAAATTTGAA
582 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
* **
17081906 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCTTGTCTCTCTGGCCGG
647 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
** * * * * * *
17081971 CGTAGTGCCCGATCGCTCGCCTGCTCGCTTGTTTCATCGGTTGGCTTAGGCATATGGAGTTCCAT
712 CGTAGTGCCCGCCCGCCCACC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT-CAT
* * * ** * *
17082036 TCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGCAGCAGGATTGGTGGCACGTAGAGGGGGA
775 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGA-TCGCAGCATGCAGAGGGGGA
* * * * * * *
17082101 CCCGGCCGATCCCCGGCTTGCGCATCCCACCCTTCTAGCCGGTTGAGCACCCGCACGCTCG
838 -CC-ACTGAT-CCC-GCTTGCGCAT-CC-GCC-TCTGGCCGGCTGAGCACCCGTACACTCG
* *
17082162 TTTCGTGGATTGACTTAGGCATACGGAGTTCATTCC----C--AG--T-C-----T-A-----AG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * *
17082207 -CT----T-GGACCGGACCGAGGGTTACGTCAGCACATGCTGGCCTCGAGCATGTGCTGGTGCCA
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCTGG-CTCGAGCATGTGCTGGTGCCA
* * * *
17082266 CATTTTTCTTCCTCGGGACACCATCGCCGGAGCATCGTCGGAGAACCTAACCGAAGGCATTAGGG
130 CATTTTTCTT-CTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * * *
17082331 TTCCGACGATCGGGGGGGCCGGGGGGGTGTGCACACATTATGTGTGATGGGTGCTGCTACTTGGC
194 TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
*
17082396 CCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGA
259 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
* *
17082461 GATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTGAAATGG
324 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* *
17082526 ACACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAAAAAAAATACAA
389 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAA
* * * *
17082591 GGATCACGTCTACCAAGTTTGGGACCAAAACTCCTTCTGAAAAAATTTTAATAAATCCCGAACTG
454 GGATCACGTCTACCAAGTTTGGG-CCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAACCG
* * * * *
17082656 CAAAAAGTTTCAAAAATCATGAAAAATAGGAAACAAGTCGCCTTGCCATGAAACTTCACGTGAAG
518 TAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* *
17082721 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGTACACAGAAATATGAAG
583 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * *
17082786 ATGTGCCTAAACCCACCTACCAGCCTATTGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGC
648 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGC
* * *
17082851 GTAGT----GCCCGCCCA---CCCGCTTGTTTCGTCGGTTGGCTTAGGTATACAGAGTTCATTCC
713 GTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* * * *
17082909 CAGTCTAAGATCAGACC-GAACCGAGTGTTGTGGCAGCAGGATTAGCAGCACGCAGAGGGGGACC
778 CAGTCTAAGATCAGACCAG-ACCGAGGGTTG-CGCAGCAGGA-TCGCAGCATGCAGAGGGGGACC
* * ** * * **
17082973 TGACCT-ATCCACGGCTTGCGCATCCCGCCCCTATGGCCAGCTGAGGGCCTGCATGCTCG
840 --A-CTGATCC-C-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* * **
17083032 TCTCATAGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATAGGGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* ** * * *
17083097 TCTAAGATCGGATTAGATCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCG
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
*
17083162 TATTTTTCTTCTCCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
130 CATTTTTCTTCT-CGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * * **
17083227 TTCCAACGATC-GGGGGGCC-GGGGGTTGTGCGCACGTGATGTGCAATGGGTGCTGGTACTTGGC
194 TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
* *
17083290 CCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCATACCCCCTTAAAGAGCATTTGA
259 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
*
17083355 GATTTTACAGGTTTTCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
324 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* *
17083420 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAA
389 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAA
* * ** ** * *
17083485 GGATC-CTCTCTACCAGGTTTGGTGGTAAAACTCCTTCCAAAAAAATTTAAAAAAAT-TCCAAAT
454 GGATCAC-GTCTACCAAGTTTGG-GCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCT-CGAAC
* *
17083548 TGTAAAAAGTTTCAAAAATCGTTAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
516 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* *
17083613 AGGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
581 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGA
*
17083678 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCG
646 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * * ** *
17083743 ACGTTGTGCCCACCCGCCCACTCGCCCGCTCGTTTTC-TCAATTGGCTTAGGCATACAGGAGTTT
711 GCGTAGTGCCCGCCCGCCCAC-CGCCCGCTCG-TTTCGTCGGTTGGCTTAGGCATAC-GGAGTTC
* * *
17083807 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACAGTAGCAGGATCGCCAGCTTGCAGAGGGG
773 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATCG-CAGCATGCAGAGGGG
17083872 GACCCCACTGATCCTCGACTTGCGCATCTCGCCATTCTGGCCGGCTGAGCACCCGTACACTCG
836 GA--CCACTGATCC-CG-CTTGCGCATC-CGCC--TCTGGCCGGCTGAGCACCCGTACACTCG
*
17083935 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
** * * * *
17084000 TCTAAGATCAGACTGGACCGAGGGTTGCGGTAGCACATGCTAGGCTCGAG-ATGTGTTGGTGCCG
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* * * *
17084064 TATTTTTCTTCGTCGAGGCACCATCGCCGGATCATCGTCGGAGAACTTGACCGACGGCATTGGGG
130 CATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * * *
17084129 TTCGGGCAATCGGGGGGGCC-GGGGGGCGTGCGCACATGATGT-TCGATGGGTGCTGGTACTTGG
194 TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGT-GATGGGTGCTGGTACTTGG
** *
17084192 CCCTTATATTGGCCCCCTATCCCTCATCATGCCTCAAGAACTCACACCCCCTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
17084257 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * * * *
17084322 GTCACAAAATATTCTACAGTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCCA-AAAAATACA
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACA
* * * * * * *
17084386 AGGATGACGTCTGCCAAATTTAGGGCTAAAACTCCTTTTGAAAATATTTAAAAAAATCTTGAACC
453 AGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAACC
** * *
17084451 GTCGAAAGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCCTGCCATGAAACTTCACGTGAA
517 GTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* *
17084516 GGCTTAAGGGACCATTGTATGAATTTAAAAGTCATAAAAATGGCATTGGCACGCAGAAATATGAA
582 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
* *
17084581 GATGTGCCTAGACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCTCGTC-CTCTGGCCGG
647 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
* ** ** *
17084645 CGTAGTGCCCGCCCGCCCACCCACCCTTTCGTTTCGTCGGTTGGCTTAGGCACGCGAAGTTCATT
712 CGTAGTGCCCGCCCGCCCA-CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* ** *
17084710 CCCAATCTAAGATTGGACCAAACCGAGGGTTGCGACAGCAGGATCGACAGCATGCAGA-GGGG--
776 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG-CAGCAGGATCG-CAGCATGCAGAGGGGGAC
*
17084772 ----GA---C-C---CG---CC-CCTCTGGTCGGCTGAGCACCCGTACACTCG
839 CACTGATCCCGCTTGCGCATCCGCCTCTGGCCGGCTGAGCACCCGTACACTCG
* * ** * * *
17084810 TTTCATGGGTTGACTTCGCCATATAGAGTTAATTCCCAATCTAAGCATACAGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * *
17084875 TCTAAGATCAGACCAGACCGAGGGTTGCGGCAACACATGCTTGGCTCGGGCATGTGTTGGTGCCA
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGC-TGGCTCGAGCATGTGCTGGTGCCA
* * * * * *
17084940 CATTTTTCTTCACCGGGGCACCATCGTCGGAGCTTCG-CAGGAGAACCCGACTGGCGGCATTGGG
130 CATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGG
* * * * *
17085004 GTTCCGGCGATCAGGGGGGCCAGGGGGGGTGTTCGCACATGATGTGTGATAGGTGTTGGTACTTG
193 GTTCCGACGATCGGGGGGGCCA-GGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
* * *
17085069 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCTAGAACTCTCACCTCCTTAAAGAGCATTT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* * * *
17085134 CAGATTTTATAGGTTTGCTGCCAATAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
*
17085199 GGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
* * * * *
17085264 AAGGATCACATCTACCAAGTTTGGGGCCAAAAGTACTTTTGAAAAAATTTTAAAAAATCTCGAAC
452 AAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAAC
17085329 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
516 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * *
17085394 AGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGA
581 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGA
* * *
17085459 AGATGTGCATAAACCCACCTACCATCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCG
646 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * * *
17085524 GCATAATGCCCGCCCGCCCGCCTGCCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
711 GCGTAGTGCCCGCCCGCCCACC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * ** * ** *
17085589 TCCTAGTCTAAGATCGGACTGGACCGAGGGTTGCGACAGCAGGGTCG--GCA--C----CCGTA-
775 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG-CAGCAGGATCGCAGCATGCAGAGGGGGAC
** * *** * * *
17085645 CACTCG-TTTCG--TG-G-GT-TAACT-TTGCC--AT-ACGGA---GTTA-A-T--
839 CACT-GATCCCGCTTGCGCATCCGCCTCTGGCCGGCTGA-GCACCCG-TACACTCG
** * * * * * ** *
17085684 TCCCA---G-T--C-TAAGCATACGAAGTTGATTCCCAGTCTAAG-AT-C-G-GATCAAACCGAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCA-
** * * ** * * * * *
17085738 GGT-TGCGA-CAG-CACATG--C-TGGGCT-C-G-AGCATGTGC-GGGTAC-CGTATTTTTCT--
65 -GTCTAAGATCAGAC-CA-GACCGAGGGTTACGGCAGCACATGCTGGCT-CGAGCA-TGTGCTGG
** ***** * * * * * * * * **
17085790 T-CATCGAGGAACCGTCGTCGGAGCATCACTGGAGAACCTGACCGA-CGGCATTGGGGTTCCGAT
125 TGCCAC-ATTTTTCTTC-TCGGGGCACCA-T--CG--CCGGAGC-ATC-G--TCGGAGAACC--T
* ** *** * ** * ** * * * *
17085853 GATCGGGGGGCCGGGGGGTGTACGCAC-AT--GATGTG-C-GATGGCTGCTG-GTACTTGGCCCT
177 GA-CCGACGGCATTGGGGT-TCCG-ACGATCGGGGGGGCCAGGGGGGTG-TGCGCACAT-G--AT
* * ** * * ** ** ** * * * * *
17085912 -TAT-ATTGGCCCT-CTATCCCT--CACCAAACCTTGAGAACTCAAACCC-CCTTAAA----GAG
235 GTGTGATGGGTGCTGGTA--CTTGGC-CCTTATATTG-GCCCCCTATCCCTCATCAAACCTCGAG
* * * *
17085967 CATCTGAGA------T----------------TTTACAGGTTCGCTGCCAGTAGCCATTAAAGTG
296 -AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
*
17086010 TCTGAAATGGGGACAC-TTTTTGAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
360 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* *
17086074 GTTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
425 -TTGTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCT
* * * * * *
17086139 T-TCGAAAAAATTTTAAAAAATCCCGAATCGCAAAAAGTTTCAAAAATCATGAAAAATTGAAAAC
488 TCT-GAAAAAATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
* *
17086203 GAGTCATCTTGCGATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
552 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
17086268 AAAAATGGCATTGGCACACAGAAATATGAAGATGTGTCTAAACCCACCTACCACCCTATCGATCC
617 AAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* *
17086333 ACGGCTTGTGCAT-CCGATCTCTCTGGCCGGCGTAGTGCCCGCCCTCCCA---CCCGCTCGTTTC
682 ACGGCTTGCGCATCCCG-TCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTC
* * ** * *
17086394 ATCGGTTGGCTTAGGCATACGGAGTTCATTCCCATTCTAAGATGGGACCGGACAGAGGGTTAG-G
746 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT-GCG
* * * * * *
17086458 TAGTAGGATCG--GTAGTGCATAGAGGGGGACCCACGCCGATCCCCGGCGTGCGCATACATCCCC
810 CAGCAGGATCGCAGCA-TGC--AGAGGGGGA-CCA--CTGAT-CCC-GCTTGCGCAT-C--CGCC
* * * * *
17086521 TCTGGCCGACTGAGCGCCCGCACGCTCA
864 TCTGGCCGGCTGAGCACCCGTACACTCG
* * * * ** *
17086549 TTTCGTGGGTTGACTTAAGCATACGAAGTTCATTCCCAGTCTAAGCATATGGAGTTGATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * ** * * * * * *
17086614 TCTAAGATCGGATCAGATTGAGGGTTGCGACAGCACATGCTGGGCTCAAGCATGTACGGGTACCA
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* * * * * *
17086679 TATTTTTCTTCACTGAGGAACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACAGCATTGGGG
130 CATTTTTCTTCTC-GGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * *
17086744 TTCCGACGA-CCGGGGGGCC-GGGGGGATGTGCACACATGATGTGCGATGGGTGCTGGTACTTGG
194 TTCCGACGATCGGGGGGGCCAGGGGGG-TGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
* * *
17086807 CCCTTATATTGTCCCCCTATCCCTCATCAAACCTTGAGAACTCACCCCCCCTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* * *
17086872 AGATTTTACAGGTTTGCTGCCTGTAGCCAATAAAGTGTCTGAAATGGGGACACTTTTTACAAATG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * * *
17086937 GTCACAAAATCTTGTGCACTTCAAGTTTTTAGCTGAAGGTT-TTTTATGCATGCCAACAAAACTA
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA--TTGTTTTGTGCATGCCAACAAAAATA
* * *
17087001 CAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTCCTT-TCAAAAAAATTTAAAAAAATCCCGA
451 CAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCT-GAAAAAATTTAAAAAAATCTCGA
* * *
17087065 ACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCGATGAAACTTCACGT
514 ACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
*
17087130 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATAT
579 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATAT
* *
17087195 GAAAGATGTGCCTAAACCCACCTACCACCCTCTCGATCCACGGCTTGCGCATCCCGTCTCTTTGG
644 G-AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
* *
17087260 CCGGCGTAGTGCCCGCCCG--C-CCGCCCACTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTC
708 CCGGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
* ** * * * *** *
17087322 ATTCCTAGTCTAAGATGGGACCAAACAGAGGGTTGCGGTAGCAGGATCGGCAGCGCACAAAGGGC
773 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATC-GCAGCATGCAGAGGG-
* * * * * * * * *
17087387 CGACCCGCGCCGATCCCCGGCTTGCACATACATCCCCTCTGG-CGGACTGAGCGCCTGCACGCTC
835 GGA--C-CACTGAT-CCC-GCTTGCGCAT-C--CGCCTCTGGCCGG-CTGAGCACCCGTACACTC
17087451 G
891 G
* * * *
17087452 TTTCGTGGGTTGACTTAAGCATACGGAGTTCATTCCCAGTCTAAGCATATAGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * * *
17087517 TCTATGATCAGACCAGACCGAGGGTTACGTCAGCACATGTTGGGATTGGGCATGTGCTGGTGCCA
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* ** * *
17087582 CATTTTTCTTCGCTGGGGCACCATCATCGGAGCATCGTCGAAGAACCTGATCGACGGCATTGGGG
130 CATTTTTCTTCTC-GGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * * *
17087647 TTCCGACGATCAGGGGGGCCGGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGC
194 TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
* * * *
17087712 CCTTAAATTGGCCCCCTATCCCTCATGAAACCTTGAGAACTCACCCCCCCTTAAAGAGCATTTGA
259 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
* * *
17087777 GATTTTACAGGTTTGCTGCCTGTAGCCAATAAAGTGTCTGAAATGGGGACACTTTTTACAAATGG
324 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* * * * *
17087842 TCACAAAATCTTGTGCACTTCAAGTTTTTAGCTGAAGTTTTTTTATGCATGCCAACAAAACTACA
389 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTGTTTTGTGCATGCCAACAAAAATACA
* * *
17087907 AGGATCACGTCTACCAAGTTTGGGGCTAAAACTCCTT-TCAAAAAAATTTAAAAAAATCCCGAAC
453 AGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCT-GAAAAAATTTAAAAAAATCTCGAAC
* * *
17087971 CGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCGATGAAACTTCACGTGA
516 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
*
17088036 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAAAAATATGA
581 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGA
* * *
17088101 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCGGTCTCTTTGGCCG
646 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * * *
17088166 GCGTAGTGCCCGCCCTCCCA---CCCGCTAGTTTCATCGGTTGGCTTAGGCATA-AGAGTTCATT
711 GCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * *
17088227 CCCAATCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCATGATCGACAGCATGCAGAGAGGCAC
776 CCCAGTCTAAGATCAGACCAGACCGAGGGTTG-CGCAGCAGGATCG-CAGCATGCAGAGGGGGA-
* * * * * * **
17088292 CCGACCGATCCTCGGCTTGCGCATCCCACCCCTTTGGCCGACTGAGCGCCCGCATGCTCG
838 CC-ACTGATCC-C-GCTTGCGCAT--C-CGCCTCTGGCCGGCTGAGCACCCGTACACTCG
*
17088352 TTTCGTGGGTTGAC-T-----TA--G-G--CA----TA--C---G-----A-AGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * *
17088391 TCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCATAGGCTGGCGCTCGGGCATGTGCTGGTGCC
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-G-GCTCGAGCATGTGCTGGTGCC
* * * *
17088456 GCA-TTTTCTTCGTCGGGGCACCATCACCGGAGCATCATCGTAGAACCTGACCGACGGCATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* ** * *
17088520 GATCCGGTGATCGGGGGGGTC-GGTGGGGTGTGCACACATGATGTGTGATGGGTGCTGGTACTTG
193 GTTCCGACGATCGGGGGGGCCAGG-GGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
* * *
17088584 GCCCTTATATCGGCCCTCTATCCCTCATCAAACCTCTAGAA-TGCAC-CCCCCTTAAAGAGCATT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT-CACACCCCCTTAAAGAGCATT
* * * *
17088647 TGAGATTTTACAGGTTTGCTGCCCGTAGCCATTAAATTGTCTGAAATGGGAACATTTTTTTCAAA
321 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
* * *
17088712 TGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATA
386 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATA
* ** ** * *
17088777 CAAGGATCACATCTACCAAGTTTGGGGTGAAAACTCCTTCCAAAAAAAATTT-AAAAAATCCCAA
451 CAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTT-CTGAAAAAATTTAAAAAAATCTCGA
** *
17088841 ACCGTAAAAAGTTTTGAAAATAGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
514 ACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* * *
17088906 GAAGGCTTAAAGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATAT
579 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATAT
* * *
17088971 AAAGATGTGCCTAAACCCACCTACCACCTTATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGC
644 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
* * * * * *
17089036 CAGCATAGTGCTTTCCCGCCCGCCCGTCCACCCGCTCGTTTCATCGGTTGGCTTAGGCATACAGA
709 CGGCGTAGTG----CCCGCCCGCCC-ACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * ** * * * * * * * *
17089101 GTTTATTCCTAGTCTAAGATTGGACCGGACGGAGTGTTGTGGCTGTAGGATCGATAGCATGAAGA
769 GTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTG-CGCAGCAGGATCG-CAGCATGCAGA
* * * * **
17089166 GGGGGGCCCGGCCGATCCCTGGCTTGCGCATCTCGCCCCTCTGGCCGGCTGAGCACCCGCATGCT
832 -GGGGGACC-ACTGATCCC--GCTTGCGCATC-CG--CCTCTGGCCGGCTGAGCACCCGTACACT
*
17089231 CA
890 CG
* * * * **
17089233 TTTCGTGGGTTGACTTAGCCATATGGAGTTCATTCCCAGTCTAAGCATAGGGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * *
17089298 TCTAATATCAGACCAGACCAAGGGTTACGGCAGCACATGCTGGGCTCG-GCCATGTGCTGCTGCC
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAG-CATGTGCTGGTGCC
* * * *
17089362 GCATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCG-CGGAGAACCTGACCGACGGCTTTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
*
17089426 GTTCCGACGATC-GGGGGGCC---GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
193 GTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
* *
17089487 CCCTTATATTGGCCCCCTATCCCTCGTCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* *
17089552 AG-TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTATTCAATTG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * * *
17089616 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCGTGCCAATAAAAATACA
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACA
* * * * *
17089681 TGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTCCGAAGAAATTTTAAAAAATCTCGAACC
453 AGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAACC
* * * *
17089746 GCAAAAAGTTTCGAAAGTCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAA
517 GTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
*
17089811 -GCTCTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGA
582 GGCT-TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGA
* *
17089875 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCACTCTGGCCG
646 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * *
17089940 ACGTAGTGCCCGCCTG--C-CCGCCCGCTCGTTTCGTCGTTTGGCTTAGGCATACGGAGTTCATT
711 GCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * * **
17090002 CCCAGTCTAAGCTTAGACCGGACTGAGGGTTGCAGCAGCAGGATCGATAGCAAGCAGAGGAAGAC
776 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATCG-CAGCATGCAGAGGGGGAC
* * * * * *
17090067 C-CGATCGATCCTCGGCTTGGGCATCCCGCCCCTTTGGTCGGCTGAGCGCCCGCACGCTCG
839 CAC--T-GATCC-C-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* * ** *
17090127 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCACTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * *
17090192 TCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTAGAGCATGTGATGGT---A
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
** *
17090254 C-CGTAT-TT-T----------T--------CA---T--------C--ACCGACGGCATTGGGGT
130 CATTTTTCTTCTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGT
* *
17090285 TCCGACGATCGGGGGGGCC-GGGGTGGTGTGCGCACATGATGTGCGATGGGTGCTGGCACTTGGC
195 TCCGACGATCGGGGGGGCCAGGGG-GGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
* * *
17090349 CCTTATATTGGCCCTCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATCTGA
259 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
* *
17090414 GATTTTACAGGTTCGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCTAATGG
324 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* * *
17090479 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTTATGCGTGCCAACAAAAATACA
389 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTGTTTTGTGCATGCCAACAAAAATACA
* * * ** * *
17090544 AGGATCAAGTCTGCCAAGTTTGGGGCCAAAACTCGTTTCT-AAAAAATTTTTAAAAATCCCAAAC
453 AGGATCACGTCTACCAAGTTT-GGGCCAAAACTC-CTTCTGAAAAAATTTAAAAAAATCTCGAAC
* * *
17090608 CGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCGATGAAACTTCACGTGA
516 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* * **
17090673 AGGGTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACAGAAATATGA
581 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGA
* *
17090738 AGATGTGTCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTATCCCGTCTCTCTGGCCG
646 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
* * *
17090803 GCGTAGT--------G-CC-CC-CCCGCTCGTTTCAT-GTGTTGACTTAGGCATACGGAGCTCAT
711 GCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCG-GTTGGCTTAGGCATACGGAGTTCAT
* * * * *
17090856 TCCCAGTCTAAGATCAGACTAGACCGAGGGTTTCAGCAGCA-CATGCTGGGCTCGAGCATG-TGT
775 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGAT-C---G--C-AGCATGCAGA
* * ** * * * * * * * **
17090919 TGGTG-CCACATTTTTCTTCG-TCGGGGCA-CCATCGTCGGAGCATCGTG-GGATAACCTGATCG
832 GGGGGACCAC--TGATC-CCGCT-TGCGCATCC-GCCTCTG-GC--CG-GCTGAGCACC----CG
* * *
17090980 TGGCATTGGGG
884 T-ACACT--CG
* ** * * * * * * *
17090991 TTCCGGTGATCTGGGGGCCCGAGTGGGGGT-GTGCACACACGATGTGTGATGGGTGCTGGTACTT
1 TT----TCA--T--GGG-TTGACT-----TAG-GCATAC-GGA-GT-TCAT---TCCTAGT-CTA
* ** *** * * ** * *** **
17091055 AGCCCTTGTATTGAACCCCTATCCCTCA-TCAAACCTCGAGAACTCACACC--CCCTTAAAG-AG
44 AG--C--ATACAG-AGTTC-ATTCC-CAGTCTAAGATC-AG-AC-CAGACCGAGGGTTACGGCAG
** * ** ** * * * ** * ** * * ** *
17091116 CATTTG-AGATTTTAAAG-GTTTGCTGCCAGTAGCCATTAACGTGTCTGAATTGGGGATACTTTT
99 CACATGCTG--GCTCGAGCATGTGCTG---GT-GCCA--CATTTTTCT-TCTCGGGG-CACCATC
** * * ** * * *** * ** ***** *
17091179 TTC--A-AATTGTCACAAAATCTTGTACCGTTTG-ATT---TTTTAG-CTGAATTTTTTTGTG-C
154 GCCGGAGCATCGTCGGAGAA-CCTG-ACCGACGGCATTGGGGTTCCGAC-G-A-TCGGGGGGGCC
* * ** * * * *** * ****
17091235 A--------TAC-CAACA-AAAAT-TCAAGGAT-CAT-GT-CTAT-GAAGTT-T-TGGGCCAAAA
214 AGGGGGGTGTGCGC-ACATGATGTGTGATGGGTGC-TGGTACT-TGGCCCTTATATTGGCCCCCT
* ** ** ** * * * ** * * * ** * * *
17091283 ATCCTTCTAAAAAAATTTTAAAAAATCCCA-AACCGTAAA-AG-GTTTCGTAAAACGTGA-AAGA
276 ATCC--CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT-G--AGATTTTACAGGT
* *** * * * * * * *
17091344 TAGAAAACGAGTAGTCTTGCCATGAAACT-TCACGTGAAGACTTAAGGGAC-CATTGTAT-GAAT
336 TTG-CTGCCAGTA-----GCCATTAAAGTGT--C-TGAA-A--T-GGGGACAC-TTTTTTCAAAT
* *** * ** * * * *** *
17091406 -TTACAAGCAATAAAAATG-GCA-TT-G-G--CAT-GCAGAAATATGAAGATGCA--CCTAAACC
387 GGT-C-A-CAA-AATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTG-TGCATGCC--AACA
* ** * *** * * * * *** ******* ****
17091461 CACCTACCACCCT-A--TCGATCCATGACTTGTG-CATCCCGT-CTCTCTG-GCCGGCGTAGTGC
445 AAAATACAAGGATCACGTCTA-CCAAG-TTTGGGCCAAAAC-TCCT-TCTGAAAAAATTTAAAAA
*** * * ** ** * *** * * *
17091520 CCGCCCG-CCCGT---TCGTTTC---GTTGGTTG--GCTTAGGCATACGGAGT--TCATTCCCAG
506 AATCTCGAACCGTAAAAAGTTTCAAAAATCG-TGAAAAATA-GAAAAC-GAGTCGTC-TTGCCA-
** ** * ** ** ** * ****** * * ****
17091574 TCTAAGATCAAACCG-GACCAAGGGTTGCGACAGCACACAG-ACGGGGACCCGAGCGATCCCCA-
566 TGAAACTTC--A-CGTG---AAGGCTTAAGGGA-C-CATTGTATGAATTTACAAGCCATAAAAAT
* * *** * ** * * * * * *
17091636 -GC-TTGCGTATC-CCGCCCCTCTG--GCCG-G-TTGAGCACCC-GC-A-CACTCGTTTCGTGTG
623 GGCATTG-GCA-CGCAG-AAATATGAAGATGTGCCT-A-AACCCACCTACCAC-CCTATC--G-A
** * * * * ** * * **** * * *** * * *
17091691 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTA-AGAT
679 TCCAC---GGCTTGCGCA-TCCCGTCTC--TCT-GGCCGGCGTAGTGCCCGCCC-GCCCACCG--
*** *** ** * * * * *** ** ** * *
17091755 CAAACT-GGACCGAGGGTT-GCGTCAGCACATGCTGG-GCTC--GGGCATGTGCTGGGGCCACAT
734 CCCGCTCGTTTCGTCGGTTGGC-TTAG-GCATAC-GGAGTTCATTCCCA-GT-CTAAGATCAGAC
**** ** * ** * * ** * * * * *
17091815 TTTTCTTCGTCGG--G-GCACCATCACCGAAGCAT-C-GCCGGAGAAC-CTAATCGGCGGCATTA
794 CAGAC--CGAGGGTTGCGCAGCAGGATCGCAGCATGCAGAGGGGGACCACTGATC--CCGC-TTG
** * * ** * * * *** *
17091874 CGGTTCCAATG-ATCGGGGGGGCCGGGGAGGTGTGCGCACAT-G
854 CGCATCC---GCCTCTGGCCGGCTGAGCACCCGT--ACAC-TCG
* * **** * * *
17091916 ATGTGCGATGGGTGCTGGTACTT-GGCCCTTATATTGGCCCCCTATCCCTCA-TC-AAACCT-CG
1 -T-TTC-ATGGGT--T-G-ACTTAGG--C--ATA-CGGAGTTC-ATTCCT-AGTCTAAGCATAC-
* ** ** ** * **** *** * * * *
17091977 AAAACTCACACCCCCT-TAAAGAGCATTTGAGATTTTACAGGTT--TGCTGC-CA-G-TAGC-C-
51 AGAGTTCATTCCCAGTCT-AAGATCAGACCAGA-CCGA-GGGTTACGGCAGCACATGCTGGCTCG
** * * ** * *** * * ** * *
17092034 ATTAAAGTGTCTGAAATAGGGACACTTTT-TTCAAAAGGTCACAAAATC-TTGTA-CA-CTTC-G
113 A-GCATGTG-CTG--GT-GCCACATTTTTCTTC-TCGGGGCAC--CATCGCCGGAGCATCGTCGG
*** * * ***** ** * * ******** **** *
17092094 AG-TTTTTAGCTGAATTTTTTTGTGCATGCCAAC-A--AAAATAAAC-GGATCATGT-C-TACA-
170 AGAACCTGA-CCG-ACGGCATTG-GGGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACAT
* **** * *** * * ***** *
17092151 -AAGT-T--TGGG-GCCAAAACTCCT-TCCGAAAAAATTTG-AAAAAAT-CCTGAACCATAAAAA
232 GATGTGTGATGGGTGCTGGTACT--TGGCC-CTTATATTGGCCCCCTATCCCT----CAT-CAAA
** * * * **** * * * *
17092208 GTTTTGACAA-TCATGA-AAAATAGAAAATGAGACGTCTTGCCATGAAACTTCACATGAAGGCTT
289 -CCTCGAGAACTCA-CACCCCCT--TAAA-GAG-CAT-TTG--A-G--ATTTTAC----AGG-TT
** * * * * *** * *
17092271 AACGGACCATTGTATG-AATTTACAA-T-CCATAAAAATGGCATTGGCACACCGAAATATGAAGA
337 TGCTG-CCA--GTA-GCCA-TTA-AAGTGTC-T-GAAATGG----GG-ACA-C-TTTTTTCAA-A
* *** * ***** * * *
17092333 T-GTGC-CTAAACCCACCTACCACCCTATCGA-TCCACGGCTTGCGCATCCTG-TCTCT-C-TGG
386 TGGT-CAC-AAA---ATCTTGTACACT-TCGAGTTTTTAGC-T--GAAT--TGTTTTGTGCAT-G
* ** * * * * ** * ** * * *
17092392 CCGAC-GTAGTGCCAGCCCG-TC-CG-C-CCGCTCGTTTCGTCGGTTTGC-TTA-TGCATACGGA
439 CCAACAAAAATACAAG---GATCACGTCTAC-CAAGTTT-G--GG---CCAAAACT-CCTTCTGA
**** * **** ** * * * *** * * *** * * **
17092450 GTTCATTCCCAGTCTAAGATCGAACCAG-ACCGAAGGTTGCTGTAGTAG-GATCGACAGCACGCA
493 AAAAATT--TAAAAAAATCTCGAACC-GTA--AAAAGTTTCAAAAATCGTGAAAAATAGAAAAC-
* * * * * * * * * * * * **
17092513 GAGGCAATCTGGGC--G-ATCCTCGGCTTG-CGCAGCCT-A---CCCCTCTGGCTAGCTGAGCGC
552 GAGTC-GTCTTGCCATGAAACTTC-ACGTGAAG--GCTTAAGGGACCAT-T-G-TA--TGA--AT
*** * * *** * ** ** * *** * **
17092570 CCGCACGCTCGT-TTCATGG-GTT-G-ACTTAGGCATATG--GA-GT-TC-ATTTCCAGTCTAAG
606 TTACAAGC-CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCA-CCTACC
* ** * * *** * * * * *
17092626 ATCGGACCAGA-CCGA-GGGTTGCGACAGAGCATGCTAGGCTCAGGCATGTGC-TGGTGCCACAT
669 ACCCTATC-GATCC-ACGGCTTGCG-CATCCCGT-CT---CTCTGGC-CG-GCGTAGTGCC-C-G
**** * ** * ** * * * * * *
17092688 TTTTCTTCACCG-GGGCAC-CATC-ACTGAAGTGTCGC-TAGAGAACCTGACCGACG-GCATT-G
723 CCCGC-CCACCGCCCGCTCGTTTCGTC-G--GT-TGGCTTAG-G--CAT-ACGGA-GTTCATTCC
** * * **** * * * * ** * * * * *
17092747 GGGTTTTCAGCGATC-GGGGGGGCCGGGGGGTGTGTGCA-CATGAT-GTGGGATG-GGTGCTGGT
778 CAG-TCT-A-AGATCAGACCAGACC-GAGGGT-TGCGCAGCAGGATCGCAGCATGCAGAG-GGGG
* * ** * *** * * * * *
17092808 A-C-TTG-GCCCTTATATTGGCCCCTTATCC-CTCATCAAACC-TC-GAGAACTC--ACACCCC
837 ACCACTGATCCC---GCTT-G-CGC--ATCCGC-C-TCTGGCCGGCTGAGCACCCGTACACTCG
* * * * * ** * * * **
17092864 CTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT-AAAGTGTCTGAA--ATGG
1 TTTCATG-G--GTT--GA-CTT--AGGCATAC-G-GAGT--TCATTCCTA--GTCT-AAGCAT--
** * * ** ** * * ** *** * ** * ** **
17092926 GGACACTTTTTTCAAATGGTCACAAAATGTTGTA-CACTTCAAGTTTTTA--GCTA-AATTTTTT
49 ACAGAGTTCATTCCCA--GTC-TAAGAT-CAG-ACCAGACCGAG-GGTTACGGC-AGCA-CATGC
* * ** * * * * ** ** *
17092987 TGTGCATGCCAACAAAAATACAAGGAT--CACGTCTAACAAGTT-T-GGGGCCAAAACTCCTTCC
106 TG-GC-T-CGAGC--ATGTGC-TGG-TGCCACATTTTTC---TTCTCGGGG-CACCA-T-C-GCC
** ** * *** * * ** * * **** ** ** * * ****** **
17093048 AAAAAAAT-TTTAAAAAATCT--CAAACCGTA-AAAAGTTTTGAAAATTGTGAAAAATAGAAAAC
157 -GGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCAG---GG
* * * *** * ** * * *
17093109 GAGTCGT-CTTGC-CATGAAACT-TCACGTGAAGGCTTAAGGGACCATT-G-CCGGAGCATCGTC
218 GGGT-GTGC--GCACATG--A-TGT---GTGATGGGTGCTGGTA-C-TTGGCCCTTA-TATTGGC
** *** ** *** * * *** *** * * * *** * ** * * **
17093169 CGGAGAC-ATTGGTGTTCCGGCGATCGGGGGGGT-GTTCGCACATGGTGTGCGATGGGTGCTGGT
271 C---CCCTATCCCTCATCAAAC-CTC-GAGAACTCACACCCCCTTAAAGAGC-ATTTGAGATTTT
* ** ** * * ** *** *
17093232 ACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAA-CCTC-GAGAACT-CACACCCCCTTAAA
330 AC-AGG---TT-TGCT-GCC-AGTA--GC-CATTAAAGTGTCTGA-AA-TGGGGA--CACTT---
* * * * *** * ** ** ** *
17093294 AAGCATTTGAGAT-GTTACAGGTTTGCTGCCAGTAGC-CATTAAAGTGTCTAAAATGGGGACACT
378 ----TTTTCAAATGGTCACA-AAAT-CT---TGTA-CAC-TTCGAGT-T-T-TTA-GCTGA-ATT
* ** * ** ** * **
17093357 -TTTT-T-CAAATGGTC-AC-AAAAT-CTTGTA-CAC-T-T--CAAGTTTTTAG-CTGAATTTTT
427 GTTTTGTGC--AT-GCCAACAAAAATACAAGGATCACGTCTACCAAG-TTTGGGCCAAAACTCCT
** * ** * * ** * *
17093410 TCGTGCATGCCAACAAAAATACAAGGATCACG--TC-TACCAAGTTTGGGGACAAAACTCCTTCT
488 TC-TG-A----AA-AAATTTAAAAAAATCTCGAACCGTAAAAAGTTT-----CAAAAAT-C--GT
* * *
17093472 GAAAAAATTTTAAAAAATCCTGAACCG-CAAAAAGTTTTGAAAATCGTCAAAAAAAGAAAACGAA
538 G-AAAAA---TAGAAAA--C-G-A--GTC-----GTCTTG-----C--C-----------ATGAA
*
17093536 TCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGGCATAAA
570 --A-C-T----T-------CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * * * * *
17093601 AATTGCATTGGCACACAAAAATATGAAGATGTACCTAAACCCACCAACCACCCTATCGATACACG
620 AATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * * *
17093666 GCTTGCGCATCCCGTCTCTCTGGCCGGCTTAGTGCCCGTCTGCCCGTCCGCTCGCGT-GTTTCGT
685 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCC-ACCGCCCGC-TCGTTTCGT
** * *** * * *
17093730 CGGTTGTTTTAGGCATACGGAGTTCATTCCC-GCTCTAAGATCGGAGTGGACTGAGAGTTGCGGT
748 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAG-TCTAAGATCAGACCAGACCGAGGGTTGC-GC
* * *
17093794 AACAGGATCGACAGCAAGCAGAGTGGGACC-CGGTCGATCCTCGGCTTGCGCATCCTGCCCTTCT
811 AGCAGGATCG-CAGCATGCAGAGGGGGACCAC--T-GATCC-C-GCTTGCGCATCC-G-CC-TCT
* * * *
17093858 GGCCAGCTGAGCATCCGCACGCTCG
867 GGCCGGCTGAGCACCCGTACACTCG
* * * * * **
17093883 TTTCATGGGATGACTTAAGCATACAGACTTGATTCCTAGTCTAAGCATATGGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * * **
17093948 TCTAAGATCAGACCAGACCGAGGGTTGCGACAGCACATGCTCGGCTTGGGCGTGTGCT-GTGCTG
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* * *
17094012 CATTTTTTTTCACCGGGGCACCATCG-C----CA------GAGAACCTGACCGACGGCATTAGGG
130 CATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * * *
17094066 TTCTGGCGATC-GAGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGC
194 TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
*
17094129 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCACACCCCCTTAAAGAGCATTTGA
259 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
17094194 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
324 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* *
17094259 TCACAAAATCTTGTACACTTCGACTTTTTAGCTGAAATT-TTTTATGCATGCCAACAAAAATACA
389 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTGTTTTGTGCATGCCAACAAAAATACA
* * ** * *
17094323 AGGATCACGTCTACGAAGTTTGGTGCCAAAAATCCTTCCAAAAAAATTTTAAAAAATCTTGAACC
453 AGGATCACGTCTACCAAGTTTGG-GCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAACC
* *
17094388 GCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTGGTCTTGCCATGAAACTTCACGTGAA
517 GTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* *
17094453 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGAAATATGAA
582 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
* * * * *
17094518 GATGTG-CTAAACCCACCAACCACCCTATCGATACACGGCTTGAGCATCCCGTCTCTCTAGCTGG
647 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
** ** * ** *
17094582 CGTAGTGCCCATCCG--C-CCGCTTGCTCATTTCGTCGGTTGTTTTGGGCATACGGAGTTCATTC
712 CGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
*** * * *
17094644 CCAGTCTAAGATCAGAGTGGACCGAGGGTTGTGACAGTAAGATCGGCAGCATGCAGAGGGGGACC
777 CCAGTCTAAGATCAGACCAGACCGAGGGTTGCG-CAGCAGGATC-GCAGCATGCAGAGGGGGACC
* * * * * * *
17094709 -CGGTCGATCCTCAGCATGCGCATCCCGCCCTTCTGGCCGACTGAACGCCCGCACGCTCA
840 AC--T-GATCC-C-GCTTGCGCAT-CCG-CC-TCTGGCCGGCTGAGCACCCGTACACTCG
** * * *
17094768 TTTCATGCATTGACTT-GAGCATACAGAGTCCATTCCCAGTCTAAGCATACAGAGTTCATTCCCA
1 TTTCATGGGTTGACTTAG-GCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCA
* ** * * * **** ** * * * *
17094832 GTCTAAGATCATACTGGACCGAGGG-TGCCGTA-TTTTTTTTCGC-CGGGGCA---CCAT--CGC
65 GTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCTGGCTC-GAGCATGTGC-TGGTGC
**** * *** **
17094889 CA-A-AGAAC-T-T----G-ACCA--G-C-G-GTAT--T-GG-GGTTCTGA-CGATCGGGGGGGT
128 CACATTTTTCTTCTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGA-C---GGCAT
* * ** * ** * * * * * *
17094935 CGGGGGGTGTGCG-CAGAT--GATGTG-C-GATGGGTGCT-AGTACTTGGCAT-TAT-ATTGG-C
189 --TGGGGT-TCCGAC-GATCGGGGGGGCCAGGGGGGTG-TGCGCACAT-G-ATGTGTGATGGGTG
*** ** * * * * * * * ** * *
17094991 CCCCTA--TCCCTCATCAAACCTTGAGAACTCAC-A-CCC-CCTTAAA----GAGCATTTGAGA-
247 CTGGTACTTGGC-CCTTATA--TTG-G--CCCCCTATCCCTCATCAAACCTCGAG-AACTCACAC
** * * ** * *
17095046 --TTTTACAG-G-A-TT--G--CTGCCA-G-TAG--G-CA-TT------AAAGTGTCTGAAATGG
305 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
17095090 GGACACTTTTTTCAAATGGTCACAAAAT-TTGTACACTTTGAGTTTTTAGCTGAAATT-TTTTAT
370 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTGTTTTGT
* * *
17095153 GCATGCCAACAAAAATACAAGGATCACGTATGCCAAGTTTGGGGCCAAAACTCCTTC-CAAAAAA
434 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAA
* * * * * *
17095217 TTTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAACTCGTGAAAAATAGAAAACGAGCCGCCTT
498 -TTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* * * * *
17095282 GACATGAAACTTCACGTGAAGGCTTAGGGGACCACTGTATGAATTTACACGTCATAAAAATGGCA
562 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* ** * *
17095347 TTGCCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTACG
627 TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * ** *
17095412 CATCCCGTCTCTCTGGCCGGCATAGTGCCCG-CC-CCC-CTGCCCGCTCGTTTAATCGTTTGGCT
692 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCT
* * * *
17095474 TAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTATG-GTAGCAGGATC
757 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG-T-TGCGCAGCAGGATC
* * * * * * **
17095538 AACAGC-TCGTAGAGGAGGACCTGCCCGATCCCCGACGTGCGCATCCCGCCCCTCTGGCCGATTG
820 -GCAGCAT-GCAGAGGGGGACC--ACTGAT-CCCG-CTTGCGCAT-CCG--CCTCTGGCCGGCTG
* * *
17095602 AACACCCGCACGCTCG
876 AGCACCCGTACACTCG
* *
17095618 TTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCTAGTCTAAGCATAC-GAAGTTCATTCCCA
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAG-AGTTCATTCCCA
* * * * *
17095682 GTCTAAGATCAGACCAGACTGAGGGTTGCGGCAG-ATATGCTGGGCTCGGGCATGTGCTGGTGCA
65 GTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCC
* * * ** * * *
17095746 ACACTTTTCTTCGTCAGGGCACCATCACCTAAGCATCGCCGGAGAACCTAACCGGCGGCATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * * * * * *
17095811 GTTCTGGCGATCGAGGGGTCC-GAGGGGTGTGCGCACATGATTTGCGATGGGTGCTGGTACTTGG
193 GTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
* * * *
17095875 CAAC-TATATTGGCTCTCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTT
258 C-CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* * *
17095939 GATATTTTACAGGTTTGCTACCGGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
**
17096004 -GTCACAAAATCTTGTACACTTCGAGTTTTTAGGAGAATT-TTTTGGTGCATGCCAACAAAAATA
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTT-GTGCATGCCAACAAAAATA
** * *
17096067 CAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCAAA
451 CAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAA
** * * *
17096132 CCACAAAAAGTTTCAAAAATCATCAAAACTAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* * * *
17096197 AAGGCTTAAGGCACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAATTATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * *
17096262 AAGACGTGCCTAAGCCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * * * *
17096327 GACGTAGTGCCCACCCG--C-CCG--C-C-CGTTTCGTCGATTAGCTTAGCCATACGGAGTTCAT
710 GGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * ** * * ** *
17096385 TCCCAGTCTAAGAACAGACCAGACCAAGGGTCACGGTAGGAAAATCGGCAGCACGCAGAGGGGGA
775 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATC-GCAGCATGCAGAGGGGGA
* * * * * * * * *
17096450 CCCGACCGATCTTCGGCTTACGCATCCCGCCTTTCTGGCCGACTTAGCGCCCGCACGCTTG
838 -CC-ACTGATC--CCGCTTGCGCAT-CCGCC--TCTGGCCGGCTGAGCACCCGTACACTCG
* *
17096511 TTTCGTGGGTTGACTTAGGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAAGTTCATTCCC
1 TTTCATGGGTTGACTTA-GGCATACGGAGTTCATTCCTAGTCTAAGCATACAG-AGTTCATTCCC
** * ** *
17096575 AGTCTAAGATCAGACTGGACCGAGAGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
64 AGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGC
* * * * * *
17096640 CGCATTTTTCTTCGTCAGGACACCATCGTCGGAGAATCGTCGGAGAACCTGACCGGCGGCATTGG
128 CACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGG
* * * *
17096705 GGTTCCGGCGATCGGGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGTTGGGTGCTAGTACTT
192 GGTTCCGACGATCGGGGGGGCC-AGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTT
* * *
17096770 GGCCCTTATATTGGCCCCCTATCCCGCATCTAACCTCGAGAACTCACACCCCCTTAAAGAACATT
256 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATT
* * * * ** *
17096835 TGAGATTTTATAGGTTTGCTACCAATAGCAATTAAAGTGTCTGAAATGGGGATGCTTTTCTCAAA
321 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
* *
17096900 TGGTCACAAAATCTTGAACACTTCGAGTTTTTAGCTAAAATT-TTTTGTGCATGCCAACAAAAAT
386 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT-GAATTGTTTTGTGCATGCCAACAAAAAT
* * * *
17096964 TCAAGGATCACGTCTACCAAGTTTGGGGCTAAAACAT-CTTCCGAAAAAATTTTAAAAAATC-CT
450 ACAAGGATCACGTCTACCAAGTTT-GGGCCAAAAC-TCCTTCTGAAAAAATTTAAAAAAATCTC-
* *
17097027 AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
512 GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
* *
17097092 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAAT
577 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAAT
* * *
17097157 ATGAATATGTGCCTAAACCCACCTACCACCCTATCGATCGACGGCTTGCGTATCCCGTCTCTCTG
642 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* *
17097222 G-CGTGC--AGT----GCCCG--C-CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGAAGT
707 GCCG-GCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* * * * * * *
17097277 T-ATTTCCCAATCTAAGATCTGATCGGA-CGAGAGTTATG-GCAGCAGCATCGGCAGCACGCAGA
771 TCA-TTCCCAGTCTAAGATCAGACCAGACCGAG-GGT-TGCGCAGCAGGATC-GCAGCATGCAGA
* * ** * * * * *
17097339 GGGGGACCCAAGCCGATCCCCTGTTTGCAAATGCCGCCACTCCGGCC-GTTGAGCGCCC-TCGCG
832 GGGGGA-CC-A-CTGAT-CCC-GCTTGCGCAT-CCG-C-CTCTGGCCGGCTGAGCACCCGT-ACA
17097402 CTCG
888 CTCG
* * *
17097406 TTTC----G-TG-C----G--T--TGAG-----T--TAG-----GCACACGGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * *
17097445 TCTAAGAGCAGACTAGACCGAGGGTTATGGCAGCACATGCTGGGCTC-AGTCATGTGCTGGTGCC
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAG-CATGTGCTGGTGCC
* * **
17097509 GCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGGTGGCATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * * * * * *
17097574 GTTTCGGCTATCGGAGGGGCCGGGAGGGGGGTATGCGCACATGATGTGCGATGGGTGCTAGTACT
193 GTTCCGACGATCGGGGGGGCC---AGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACT
* * *
17097639 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAACTCATTAAAGAGCAT
255 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
17097704 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
320 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
*
17097769 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAAATT-TTTTGTGCATGCCAACAAAAA
385 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTGTTTTGTGCATGCCAACAAAAA
* * *
17097833 TACAATGATCACGTCCACCAAGTTTAGGGCCAAAACTCCTTCCT-AAAAAATTTTAAAAAATCTC
449 TACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTT-CTGAAAAAATTTAAAAAAATCTC
** *
17097897 GAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA-
512 GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
** * * * * * * * * *
17097961 -TG-AGATTTTACA-GG---TTTG-CTGCCA-GT---AGCCATTAAAGTGTCTGAAATGG--GGA
577 GTGAAG-GCTTA-AGGGACCATTGTATG-AATTTACAAGCCATAAAAATG---GCATTGGCACG-
**** * * * ** * * *** * * * ** *** *
17098013 CACTTTTTTCAA-ATG-GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAACATTTTTGTGC
635 CAGAAATATGAAGATGTG-C-CTAAA-C--CCAC-CTACCACCCTATCGATCCAC-GGCTTGCGC
* ** ******* ** * *** ** ** * ***
17098076 ATGCCAACAAAAAATCAAG-G-A-T-CACGTCTACCATGTTTAGGGCCAAAACTCCTTTCGAAAA
693 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-C--CC--GCCCACCGCC--CGCTCGTTTCG-TCG
* * *** * * *** ** * * * * ** *
17098137 ATT--TTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAACAAAAAATGAGTC-A
750 GTTGGCTT-AGGCATAC-GGA--G--TTCA--TTC-CCAGTC-T-AAGATCAGACCA-GA-CCGA
*** * * * *** * * * *** * * ***
17098199 TCTTTTCATGAAACTTCACTTGAAGGCTTAAGGGACCATTGAGTGAATTTACAAGCCATAAAAAT
802 GGGTTGC--GCAGCAGGA-TCGCA-GC---A-TG--CA--GAG-G--GGGACCA--C-T-GATCC
* * ** * ** * * * *
17098264 GGCATTG-GCATGCAGAAATATGGAGATGTGCCTAAACCAGCC-TACCAC-CC
848 CGC-TTGCGCAT-CCG-CCTCT-G-GCCG-G-CT-GAGCACCCGTA-CACTCG
* *** * ** * * * * * * ***
17098314 TATCAAT-CCATGGCTT-GCGCAT-C-CCG-TC-TCCCT-GGCT-GGCGT--GGTGTTCGCCCGC
1 TTTC-ATGGGTTGACTTAG-GCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTC-C
* * *** * * **** * * * * * * * * **
17098369 CCGCCCGCCCGCT-TGTTTTGTCGGTTGGCTTA-GGCA-TACGGAGTTCAT-TC-CCAGTC-TAA
63 CAG-TC-TAAGATCAGACCAGACCG-AGGGTTACGGCAGCAC--A-TGC-TGGCTCGAG-CATGT
* * ****** * * ** *** ** * *
17098428 GATAGG-ACCGGAC-CGAGGGTTGT-GGTAGCAGGATCAGCAACA-CA-CAGAAGGGGACCCGGT
120 GCT-GGTGCC--ACATTTTTCTTCTCGG-GGCACCATC-GCCGGAGCATC-GTCGGAGAACC---
* * ** * * ** * ** * * *** * *
17098488 TGATCC-CCGAC-TTGCGCATCCCGCCCCT-TGGCTGG-CTGAGCGCCCGTACGCTC--G-T-T-
176 TGA-CCGACGGCATTG-GGGTTCCGACGATCGGGGGGGCCAG-GGGGGTGTGCGCACATGATGTG
* * * **** * * **
17098544 TCAT-GG-GAT-G-ACTTAGG--C--ATA-CGGAGTTC-ATTCC-CAGTCTAAGATCG-GAA--C
238 TGATGGGTGCTGGTACTT-GGCCCTTATATTGGCCCCCTATCCCTCA-TCAAACCTCGAGAACTC
* *** * * * **** * *
17098595 AGACCGAGGGTTGCGACGATAGCA-CATGCTGGGCTCGGGCAAG--TGCTG---GT-GCC-GT-A
301 ACACC--CCCTT---A--A-AG-AGCAT-TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
** * *** * *** ** * * ** * * * * *
17098651 TTTTTC-CCCACGGGG-CAACCATCGCTGGAGCATCGTCGGAGAA-CCTGACCGACAGCATTGGG
356 AGTGTCTGAAATGGGGAC-A-C-TTTTTTCA-AATGGTCACAAAATCTTG---TACA-C-TTCGA
*** * *** *** * ** * ** ** * * *
17098713 GTTCCGATGATCGAGGGGGCTGGGGGGTGTGCACACCTGATGTGCGATGGGTGC-CGGTACTTGG
412 GTTTTTA-GCT-GA-ATTG-TTTTGTGCATGC-CAACAAAAATAC-AAGGAT-CAC-GT-C-T--
* * * ** * * **
17098777 CCCTTA-TATTGGCCTCCTATC-CCTCATCAAACCTCAAGAACTCACACTCCCTTAAAGAGCAT-
465 ACC-AAGT-TTGGGC-CAAAACTCCT--T-----CTGAA-AA---A-A-T---TTAAA-AAAATC
* ** * * * ** ** * * * * ** * * *
17098839 TTGAGA-TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTATCTA-AAAAGGGGACACTTTTTTC
510 TCGA-ACCGTAAAAAG-TT--T--CAAAAATCGTGAAA--A-ATAGAAAA--CGAGTCGTCTTGC
* ** * * *** * * * **
17098902 AAATGGTCACAAAATCTTGTACAC-TCCG-AGTTTTTAGCTGATTTTTTTTGTGCA-TGCCAA--
564 -CAT-G-----AAA-C-T-T-CACGT--GAAGGCTTAAG-GGA-CCATTGTATGAATTTACAAGC
* * * * * ** **
17098962 CAAAAAAATAAGG-A-T--CACGTCTACCAAGT-T-TAG--G-GCCAAAACTCCTTCTGGAAAAA
614 CATAAAAAT--GGCATTGGCACG-C-A-GAAATATGAAGATGTGCCTAAAC-CCACCT---ACCA
*** *** ** **** ** *** * ***** ** *
17099018 TTTTAAAAAATCCTA-AAC---CGCAAAAAGT-T-T-TGAAAATCGTGAAAAATAAAAAACGAGT
670 CCCT-ATCGATCC-ACGGCTTGCGCATCCCGTCTCTCTG---GCCG-GCGTAGT-GCCCGCCCGC
** * * ** * ** * ** *
17099076 CGTCTTGCCATGAAAC--TTC-ACGTGAAGGCTTA---A-A-GGA--CCATT-GTATGAATTTAA
728 CCAC-CGCC-CG-CTCGTTTCGTCG-GTTGGCTTAGGCATACGGAGTTCATTCCCA-G--TCTAA
* *** * * * * * *****
17099130 -AT--G-CCATAAAAATGGCATTG-GCATGCAGAAATATGAAG-ATTTGCCTAAACCCACCTACC
786 GATCAGACCAGACCGA-GG-GTTGCGCA-GCAG-GAT-CGCAGCA--TG-C-AGA--GGGGGA-C
* * * *
17099189 ACACTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGC-GGGGATCCACGGCTTGCGCA
839 -CAC--T-GATCC-C-GCTTGCGCAT-CC-GC-CTCTGGCCGGCTGAGCA-CC-C-G--T--ACA
*
17099253 TCCCG
888 -CTCG
* *** * * * * * *
17099258 TCTCTC-TGGCCAGCGTAGTGCCCGCCCGCCGGCCCTCTCGTCAGCTCATTTCGTCGGTTGGCTT
1 T-T-TCAT-G---G-GT--T----G-ACTTAGG-CAT-ACG-GAGTTCA-TTC--C--TAGTC-T
** * * * * * * *
17099322 TGGCTTACAGAGTTCATTTCCAGTCTAATG-TCGGACCGGACCGAGGGTTGCGACAGCACCTGCT
43 AAGCATACAGAGTTCATTCCCAGTCTAA-GATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * ** *
17099386 GGGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCGTTGGAGCATCGCCGG
107 -GGCTCGAGCATGTGCTGGTGCCACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGG
* * * *
17099451 AGAACTTAACCGACGGCATTGGGGTTCCGATGATCGGGGGGGCCGGGGGGGTGTGCGCACATGAT
170 AGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGAT
* *
17099516 GTGCGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
235 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
** * * *
17099581 CACACCCCCTTAAAGAAAATTTGAGGTTTTACATGTTTGCTGCCAGTAGCCATTAAAGTGTTTGA
300 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17099646 AATGGGGACACTTTTTTTAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TGTT
365 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTG-T
*
17099710 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
429 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGA
* * **
17099775 AAAAATTTTAAAAAATCTCGAACCTTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCG
493 AAAAATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* * *
17099840 TCTTGCCATGAAACTTCACGTTATGTG-TTAAGGGACCATTCTATGAATTTACAAGCCATAAAAA
558 TCTTGCCATGAAACTTCACGTGAAG-GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*
17099904 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
622 TGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
*
17099969 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-CC-CCCGCCGC-CCGCCCGCTCATTTCGTCGG
687 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCC-CACCGCCCGCTCGTTTCGTCGG
** * * *
17100031 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACCAAGGGTTGCGGCAGCA
751 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCA
* * *
17100096 GGATCGACAGCATGCCGAGGGGGACCCGATTGATCCCCAGCTTGCGCATCCCGCCCCTCTGGTCG
815 GGATCG-CAGCATGCAGAGGGGGA-CC-ACTGAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCG
** *
17100161 ATTGAGCACCCGCA-AGCTCG
872 GCTGAGCACCCGTACA-CTCG
* * * *
17100181 TTTCGTCGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATAC-GAAGTTCATTCCCA
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAG-AGTTCATTCCCA
** * * * *
17100245 GTCTAAGATC-GAACCAGACCGAGGGTTGTGGTAGCACATGCTGGGCTTGGGCATGTGTTGGTGC
65 GTCTAAGATCAG-ACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGC
* * * * ** ** *
17100309 CGCATTTTTCATCGTCGGGGCACTATCGTCGGAGCATCGTCGGAGAACCTGATTGGTGGCATTGA
128 CACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGG
** * * ** * *
17100374 GGTTCCGGTGATCAGGGGTGTCGGGGGGGGTGTGCGCAAATGATGTATGATGGGTGCTGGTACTT
192 GGTTCCGACGATC-GGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTT
**
17100439 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAAAATT
256 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATT
* * *
17100504 TGAGGTTTTACATGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAA
321 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
*
17100569 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TGTTTTTATGCATGCCAACAAAAAT
386 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTG-TTTTGTGCATGCCAACAAAAAT
** *
17100633 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGA
450 ACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGA
* ** * *
17100698 ACCGCAAAAAGTTTTGAAAATCTTAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
514 ACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* * * *
17100763 TATGTG-TTAAGGGACCATTCTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATA
579 GAAG-GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATA
17100827 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
643 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
* * *
17100892 CCCGCATAGT----GCCCG--C-CCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTC
708 CCGGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
** * * *
17100950 ATTCCCAGTCTAAGATTGGATCGGACCAAGGGTTGCGGCAGCAGGATCGACAGCATGGC-GAGGG
773 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATCG-CAGCAT-GCAGAGGG
* * ** *
17101014 GGACCCGATTGATCCCCAGCTTGCGCATCCCGCCCCTCTGGTCGATTGAGCACCCGCA-AGCTCG
835 GGA-CC-ACTGAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACA-CTCG
* *
17101078 TTTCGTCGGTTGAC-T-----TA--G-G--CA----TA--C---G-----A-AGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
** * * * *
17101117 TCTAAGATC-GAACCAGACCGAGGGTTGTGGTAGCACATGCTGGGCTTGGGCATGTGTTGGTGCC
66 TCTAAGATCAG-ACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCC
* * * * * ** **
17101181 GCATTTTTCATCGTCGGGGCACTATCGTCGGAGCATCGTCGAAGAACCTGATTGGTGGCATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
** * * ** *
17101246 GTTCCGGTGATCAGGGGTGTCGGGGGGGGTGTGCGCACATGATGTATGATGGGTGCTGGTACTTG
193 GTTCCGACGATC-GGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
*
17101311 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACTCCCTTAAAGAGCATTT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
17101376 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* * *
17101441 GGTCACAAAATCTTGTACACTTCGAGTTTTGAGCTGAATTTTTTTGTGCATGCCAACCAAAATAC
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
* * * * *
17101506 AAGGATCACGTCTACCAAGTTTGGAGACC-AATCTTCTTCCGAAAAAATTTTAGAAAAT-TCTGA
452 AAGGATCACGTCTACCAAGTTTGG-G-CCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTC-GA
* * *
17101569 ACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAATCATCTTGCCATGAAACTTCACGT
514 ACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* * * *
17101634 AAAGGCTTAAGGGACCATTGTATGAATTTTCAGGCCATAAAAATGGCATTGGCACGTAGAAATAT
579 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATAT
* * ** * *
17101699 GCAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACAACATGCGCATCCCGTCTCTCTGTC
644 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
*** * ** *
17101764 CAATGTAGTGCCCGTCCGCTCGC-CCGCTTGCTCGTTT-GATCGG-TGGCTTAGGCATACGTAGT
709 CGGCGTAGTGCCCGCCCGC-C-CACCGCCCGCTCGTTTCG-TCGGTTGGCTTAGGCATACGGAGT
* * ** * * * * *
17101826 TCATTCCTAGTCTAAGATCGGACTGGACCGAGGGTTGTGGTAGCAGGATCGGTAGCACGCAGTGG
771 TCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTG-CGCAGCAGGATC-GCAGCATGCAGAGG
* ** * *
17101891 GGGACCCGACCGATCCCAGCTTGCGCATCTCGCCCTTCTGGCCGATTGAACGCCCG--CA--CG
834 GGGA-CC-ACTGATCCC-GCTTGCGCATC-CG-CC-TCTGGCCGGCTGAGCACCCGTACACTCG
* * * *
17101951 -TTC----GTT--C-----CGT--GG-GTTGA---C---T-TAGGCATACGGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * *
17101994 TCTAAGATCAGACTAGACCGAGGCTTACGGTAGTACATGCTGGGCTCGAGCATGTGCTGGTGCCG
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* * * *
17102059 TATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGTCAGAGAACTTGACCGACGGCATTGGGG
130 CATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * * * * *
17102124 TTTCG-GGAATCAGGGGGGCC-GGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTATTTGG
194 TTCCGACG-ATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
** * *
17102187 CCCTTATATTTTCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCTTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
*
17102252 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGCACACTTTTTTCAAATG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
17102317 GTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATT-TTTTATGCATGCCAACAAAAATACA
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACA
* * * *
17102381 AGGATCATGTCTACCAAGTTTTGGACCAAAACTCCTT-TCGAAAAAATTTTAAAAAATCCCGAAC
453 AGGATCACGTCTACCAAG-TTTGGGCCAAAACTCCTTCT-GAAAAAATTTAAAAAAATCTCGAAC
17102445 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
516 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG-
* * *
17102510 AAGG-TTAAGGGACCATTGTATGAATTTGCAAGCCCTAAAAATGGCATTGGCATGCAGAAATATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* *
17102574 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTATCCCGTCTCTCAGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * *
17102639 GGCGTAAT----GCCCG--C-CCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACAGAGTTCAT
710 GGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * *
17102697 TCCCAGTCTAAGATCAGACC-GAACCGAGGGTTGCAGTAGCAGGATCGGTAGTACGCAGAGGGGG
775 TCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGC-GCAGCAGGATC-GCAGCATGCAGAGGGGG
* ** ** * * * *
17102761 ACCCGACCGATCCCCGGCGAGCGCATCCCGCCCCTCTGGCCCACTGAGCGCCCGCACGCTCC
837 A-CC-ACTGAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* *
17102823 TGTCATGGGTTGACTTAGGCATACGGAGTTCATTCC----C-AATC-T--A-AG---ATT----G
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * *
17102872 -----G---AG--CAGATCGAGGGTTACGGTAGCACTTGCTGGGCTCGAGCATGTGTTGGTGCCG
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* * * * *
17102927 CATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CAGGAAAATCTAACCGACAGCATTGGG
130 CATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGG
* * *
17102991 GTTCTGACGATCAGGGGGGCC-GGGGGGTGTGTGCACATGATGTGTGATGGGTGCTGGTACTTGG
193 GTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
* *
17103055 CCCTTATATTGGTCCCCTATCCCTCATCAAACCTCGAGAACCCACACCCCCTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* * *
17103120 AGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGATACTTTTTTCAAATG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
*
17103185 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT-TTTATGTGCATGCCAAAAAAAATAC
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTT-TGTGCATGCCAACAAAAATAC
* ** *
17103249 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTTCCAAAAAAATTTTAAAAAATCTCGAA
452 AAGGATCACGTCTACCAAGTTT-GGGCCAAAACTC-CTTCTGAAAAAATTTAAAAAAATCTCGAA
* * * * * *
17103314 CAGCAAAAGGTTTCGAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* * * *
17103379 AAGGCTTAAGGGACCTTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATAGG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
17103444 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * * * * * * ** * *
17103509 AGCATCGTGCTCGCTCGCCCATCTGCCCGCTCATTTCGTCCATTCGCTTAGGCATACGGAATTCA
710 GGCGTAGTGCCCGCCCGCCCA-CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * *
17103574 TTCCCAGTCTAAGATCATACCGGACCGAGGGTTACGTTAGCAGGATCGGCAGCATGCAGAGTGGG
774 TTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG-CAGCAGGATC-GCAGCATGCAGAGGGGG
* * * * * ** *
17103639 ACCCGGCCGATCCCCGGCTTGCGCATCCCCCCCTCTGGCTGGCTGAGCGCCCACACGCTCG
837 A-CC-ACTGAT-CCC-GCTTGCGCAT--CCGCCTCTGGCCGGCTGAGCACCCGTACACTCG
*
17103700 TTTCGTGGGTTGAC-T-----TA--G-G--CA----TA---T--G------GAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * *
17103739 TCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCG-GACATGTGCTGGTGCC
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAG-CATGTGCTGGTGCC
* * * * * *
17103803 AAATTTTTCTTCGTCGGGGCACCATCGCTGGAGCATCGCCGGAGAACTTAACCGGCGGCATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * ** *
17103868 GTTCCGACAATCGGGGGGGCCGGGGGGGGTGTGCGCACATGATGTGCAATGGGTGCCGGTACTTG
193 GTTCCGACGATCGGGGGGGCC-AGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
*
17103933 ACCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* *
17103998 GAGATTTTACATGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
*
17104063 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT-TTTTGTGCATGCCAAAAAAAATAC
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
** * * *
17104127 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCAAAC
452 AAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAAC
** * *
17104192 CGTAAAAAGTTTTTAAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGA
516 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
** * * * *
17104257 ATGG-TTAAGGGACCATTGTATGAATTTACAAGCTGTAAAAATGGCATTGGCATGTAAAAAAATG
581 A-GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * * * *
17104321 AAGATGTGCCTAAACCCACCTACTACCCCATCGATACACGGCTTGCGCATCCCGTTTCACTGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * * *
17104386 GACCTAGTGCCCGCCCG--C-CCGCCCGCTCGTTTCGTCGGTCGGCTTAGGCATACAGAGTTCAT
710 GGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
** * * *
17104448 TCCCAGTCTAAGATTGGACCTGACCGAGGGTT-CTGGCAGTAGGATCGACAGCATGCAAAGGGGG
775 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC--GCAGCAGGATCG-CAGCATGCAGAGGGGG
* * * * * *
17104512 ACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTTG
837 A-CC-ACTGAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* *
17104574 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAAGTTCATTCCCA
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAG-AGTTCATTCCCA
* * *
17104638 GTCTAAGATC-GAACCAGACCGAGGGTTGC-GAAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
65 GTCTAAGATCAG-ACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGC
* * * * *
17104701 CACATTTTTCTTCGTCGAGGCACCATCGCCGAAGCATTG-CTGGAGAACCAGACTGACGGCATTG
128 CACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTG
* * * *
17104765 GGGTTCCGACGATCGGGAGGGCCGAGGGGGGTGTGCGTACATGATGTGCGATGGGTGCTAGTACT
191 GGGTTCCGACGATCGGGGGGGCC-AGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACT
* *
17104830 TGGCCCTTATATTGGCCCCCTATCCCTCATTAAACCTTGAGAACTCACACCCCCTTAAAGAGCAT
255 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
**
17104895 TTGAGATTTTATTGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG-AATGGGGACACTTTTTTCAA
320 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
*
17104959 ATGGTCACAAAATCTTGCACACTTCGAGTTTTTAGCTGAATT-TTTTGTGCATGCCAACAAAAAT
385 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAAT
* * *
17105023 ACAGGGATCACGTCTACCAAGTTTGGGACCAAAAATCCTT-TCGAAAAAATTTTAAAAAATCTCG
450 ACAAGGATCACGTCTACCAAGTTTGGG-CCAAAACTCCTTCT-GAAAAAATTTAAAAAAATCTCG
* * *
17105087 AACCATAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTTGTCTTGCCATGAAACTTCACG
513 AACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
* * *
17105152 TGGAGGCTTAAAGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCACGCAGAAATA
578 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATA
* * *
17105217 TGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGTTTGCGCATCCCGTCTCTCTCG
643 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
* * * * * * *
17105282 TCGGCATAGTGCTCGTCCGCCCACCCGCCCGCCCGTTTCGTCAGTTGGCTTAGGCGTACGGAGTT
708 CCGGCGTAGTGCCCGCCCGCCCA-CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
* * * * *
17105347 CATTCCCAGTCTAAGATTAGACCAGACTGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAAGG
772 CATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTG-CGCAGCAGGATCG-CAGCATGCAGAGGG
* * * * ** *
17105412 GGACC-CGGTCGATCCCCGGCTTGCGAATCCCGCCCCTCTTGCCGACTAAG-AGCCCACACGCTC
835 GGACCAC--T-GAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCA-CCCGTACACTC
17105475 G
891 G
* * *
17105476 TTTCGTGGGTTAACTTAGGCATACGGAGTTCATTCCCCA-TCTAAGCATAC-GACGTTCATTCCC
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATT-CCTAGTCTAAGCATACAGA-GTTCATTCCC
** * * * * * *
17105539 AGTCTAAGATCAGGTCGGATCGAGGGTTGCGGCAGCACATGCTGGACTCGGGCACGTGCTGGAGC
64 AGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCTGG-CTCGAGCATGTGCTGGTGC
** * *
17105604 CGTATTTTTCTTCGTC-GGG-A--A-------ACCATCGCCGGAGAACCTGACCGACGGCATTGG
128 CACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGG
* **** * ** * *
17105658 GGTTCCGAGGATCGATTCGGCCGGGGGGGTGTGCGCACATGATGTGCAATGTGTTCTGGTACTTG
192 GGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
* * * *
17105723 GCCCTTGTATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCATATCCCCTTAAAGAGCATTT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* * *
17105788 GAGATTTTACAGGTTTGCTGCTAGTACCCATTAAAGTATCTGAAATGGGGACACTTTTTTCAAAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
*
17105853 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
* * * * *
17105918 AAGGATCATGTCTA-CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTCAAAAAACCCCGAA
452 AAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAA-TTTAAAAAAATCTCGAA
* * *
17105982 CCGT-AAAAGTTTCAAAAATCGTGAAAAATACAAAACGAGTCGTTTTGCCATGAAACTTCATGTG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
*
17106046 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * * * * *
17106111 AAGATGTGCCTATA-CCACGTACCACCCTATCGATCCACAGCTTGCGTAACCCGTCCCTCTGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * * ** * * * *
17106175 GGTGTAGTGCCTGCCCACTCGTCCGCTCGCTTGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCG
710 GGCGTAGTGCCCGCCCGC-CCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * * * *
17106240 TTCCCAGTC-AAGAT-TGTACCAGATCGAGGGTTGTGGTAGCAAGATCACCAGCACGCAGAGGGG
774 TTCCCAGTCTAAGATCAG-ACCAGACCGAGGGTTG-CGCAGCAGGATC-GCAGCATGCAGAGGGG
* * *
17106303 GACC-CGGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCTGCTGAGCACCCGCACGCTCG
836 GACCAC--T-GAT-CCC-GCTTGCGCATCC-G--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* * *
17106366 TTTCGA-GGATTGACTTATGCATACGGAGTTCATTCCCAGTCTAAG-AT--AG-G---------A
1 TTTC-ATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCA
* * *
17106417 G-C---G---A-ACC-GA-C---GGTTACGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCT
65 GTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCC
* * * *
17106469 GCATTTTTCTTCGTCGGGGCACCATCCCCGGAGCACCGACCGGAGAACCTGACCGACGGCATTGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCG-TCGGAGAACCTGACCGACGGCATTGG
* * * * *
17106534 GGTTCCGACGATTGGCGGGGCCGGGGGGGTATGCGCACATGATGTGCGATGGGTGCTGGTACTTG
192 GGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTG
17106599 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGAGCAT
257 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT-AA-AGAGCAT
**
17106664 TTGAGATTTTATTGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG-AATGGGGACACTTTTTTCAA
320 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
*
17106728 ATGGTCACAAAATCTTGCACACTTCGAGTTTTTAGCTGAATT-TTTTGTGCATGCCAACAAAAAT
385 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAAT
* * * *
17106792 ACAGGGATCACGTCTA-CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGA
450 ACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGA
17106856 ACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
514 ACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* *
17106921 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGCCACACAGAAATAT
579 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATAT
* * *
17106986 GAAGATGTGCCTAAACCCACCTACTACCCTATCGATCCATGGCTTTCGCAT-CCGTCTCTCTGGC
644 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
* * *
17107050 CGGCATAATGCCCGCCCG--C-CCGCCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
709 CGGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * ** * * *
17107112 TTCCCAGTCTAAGATCAGACCGGACTGAGGGTTATG-GTGGCAGGATCGGTAGCACGTAGAGGGG
774 TTCCCAGTCTAAGATCAGACCAGACCGAGGG-T-TGCGCAGCAGGATC-GCAGCATGCAGAGGGG
* * * * * ** * **
17107176 GACCCGACCGATCCTCGATTTGCGTATCCCGACCCTCTGGCCAGTTGAGTGCCCGCACGTTCG
836 GA-CC-ACTGATCC-CG-CTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* * * *
17107239 TATT-GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCTA
1 T-TTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCA
* * * *
17107303 GTCTAAGATCGGACTAGACCGAGGGTTACAGTAGCACATGCTGGGCTC-AGGCATGTGCTGGTGC
65 GTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGA-GCATGTGCTGGTGC
* * * * * * *
17107367 CGCTTTTTTCTTCGCCGGGGCACCATCGCCGGAGCATTGCCGAAGAACCTGACCGGCGGCATTGG
128 CACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGG
* * * *
17107432 GTTTCC-AGCGATCGGGGGGGGC-GGGGCAGGTGTGCGCACATAATGTCTGATGGGTGCTGGTAC
192 GGTTCCGA-CGATCGGGGGGGCCAGGGG--GGTGTGCGCACATGATGTGTGATGGGTGCTGGTAC
* * * *
17107495 TTGGCCCTTATATTGGTCCCCTATTCCTCATCAAACCTGGACAACTCACACCCCCTTAAAGAGCA
254 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
17107560 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
319 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
* * *
17107625 AATGGTCACAAAATCTTGTACACTTCGAGTTTTCAGCTGAATT-TATTTGTGCACGCCAAAAAAA
384 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGT-TTTGTGCATGCCAACAAAA
* * *
17107689 ATACAAGGATCACGTCTACCATGTTTGGGACCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-C
448 ATACAAGGATCACGTCTACCAAGTTTGGG-CCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTC
* * * * *
17107753 TGAACCGCAAAAGGTTTCAAAAATCATGAAAAATAGAAAACAAGTTGTCTTGCCATGAAACTTCA
512 -GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
*
17107818 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACTCAGAAA
576 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAA
* **
17107883 TATGAAGATGTGCGTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCAACTCTCT
641 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
**
17107948 GGCCAACGTAGTGCCCGCCCG--C-CCG--C-C-CGTTTCGTCGGTTGGCTTAGGCATACGGAGT
706 GGCCGGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* ** * * * * * * *
17108006 TCATTCCCAGTCTAAGGTTGGACTAGACCAAGGGTTACAGTAGCAGGATCGGCAGCACGTAAAGG
771 TCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATC-GCAGCATGCAGAGG
* * * * * *
17108071 GGGACC-CGATCGATCCCCGATTTACGCATCCTGCCCCTCTGGCTGGCTGAGTACCCGCACGCTC
834 GGGACCAC--T-GAT-CCCG-CTTGCGCATCC-G--CCTCTGGCCGGCTGAGCACCCGTACACTC
*
17108135 A
891 G
* * * **
17108136 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATATGGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * ** *
17108201 TCTATGATC-GAACCGGACCGAGGGTTGCGGCAGCTTATGCTAGGCTCGAGCATGTACTGGTGCC
66 TCTAAGATCAG-ACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCC
* * * * * *
17108265 GCATTTTTC--AT----G----A---CCGGAGCATCGCCAGAGAACTTGACCGGCGGCATTGGGG
129 ACATTTTTCTTCTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGG
* * * *
17108317 TTCCGACGATCAGGAGGGCC-GGGGGG-GTGCGCATATGATGCGTGATGGGTGCTGGTACTTGGC
194 TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGC
* * * *
17108380 CCTTATATTGGCCCCCTATCGCTCATCAAACTTCAAGAACTCACACCCCCTTAAAAAGCATTTGA
259 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
* ** *
17108445 GATTTTACAGGTTTGCTTCTGGTAGCCACTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
324 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* * *
17108510 TAACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
389 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAA
** * *
17108575 GGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAATATC-CTGAACC
454 GGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTC-GAACC
* * * *
17108639 GTAAAAAATTTTAAAAATCGTGAAAAATAGAAAACGAGTTGTCTTGCCACGAAACTTCACGTGAA
517 GTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* * **
17108704 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATAGCATTGCCACATAGAAATATGAA
582 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
* * *
17108769 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCTGA
647 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
*
17108834 CGTAGT----GCCCG--C-CCGCCCGCTCGTTTCGTTGGTTGGCTTAGGCATACGGAGTTCATTC
712 CGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * * *
17108892 CTAGTCTAAGATCAGACCGGACCGAAGGTTGCAGCAGCAAGATCGGCAGCACGCAGAGGGGGACC
777 CCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATC-GCAGCATGCAGAGGGGGA-C
* * * * * * **
17108957 CGGCCGATCCCCGACTTACGCATCTCGCCCCTCTGGCCGACTGAGCACCTGCACGTTCG
839 C-ACTGAT-CCCG-CTTGCGCATC-CG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* * * * * *
17109016 TTTCGTGGTTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAA
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * * * *
17109081 ACTAAGATCGGACCAGATCGAGGCTTACGGCAACAGATGCTGGGCT-TAGGCATGTGCTGGTGCC
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGA-GCATGTGCTGGTGCC
* * * * *
17109145 GCA-TTTTCTTCGTCGGGGCACCATCACCAGAGCATCGTCGGAGAACCTGACCGGCGGTATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * * *
17109209 GTTCCGACGATCGGAGGGGCC-GGGGGG-GTGCGCACATGATGCGCGATAGGTGCTGGTACTTGG
193 GTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
* * *
17109272 CCCTTATATTGGTCCCCTATCCCTCATCAAACCTGGACAACTCACACCCCCTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* * *
17109337 AGATTTTACAGGTTTGCTGCTAGTACCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
17109402 GCCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACA
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACA
* * * * * *
17109467 AGCATCACGTCTACCAAGTTTGGGGCAAAAAATCTTTCTGAAAAAATTTTAAAAAATCTTGAACC
453 AGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAACC
* * *
17109532 GGAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTGGCCATGAAACTTCACGTGAA
517 GTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* *
17109597 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAATTATGAA
582 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
* * *
17109662 GATGTGTCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGTCTCTTTGGCCGG
647 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
* * **
17109727 CGTAAAGCCTGCCCACCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATATAGAGTT
712 CGT--AG--TGCCCGCCCGCCC-ACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
* * * * * * * * *
17109792 CATTCCC-GATCTAAGAACAAACCCGACTGAGGGCTGCGGCAGCAGGATTGATAGCACGTAGAGG
772 CATTCCCAG-TCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATCG-CAGCATGCAGAGG
* * * * * **
17109856 GGGACCCGACCGATCCCTGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACAGTAA
834 GGGA-CC-ACTGATCCC--GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGCACCCGTACACTCG
* * * *
17109921 TTTCATGGGTTGACTTAGGCATACAGAGTTCATT-CTCAATCTAAGCATACGGAGTTCATTTCCA
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCT-AGTCTAAGCATACAGAGTTCATTCCCA
* * * ** * * *
17109985 GTCTAAGATCGGATCGGACCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTACTGGTGTC
65 GTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCC
* * * ** *
17110050 GCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCATCGGAGAACCTGACCGGTGACATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * * * *
17110115 GTTCCGACGATTGGGGGGGTCA-GGGGGTGTGCACACATGATGTGCGATGGGTGCTAGTACTTGG
193 GTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
*
17110179 CCCTTATATTGGCCCCCTATGCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* *
17110243 AGATTTTACGGGTTTGCTGCCAGTAGCCATTAAATTGTCTGAAATGGGGACACTTTTTTCAAATG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * **
17110308 GTCACAAAATCTTGCACACTTCGAGTTTTTAGCTAAATT-TTTTGTGCACACCAACAAAAATACA
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACA
* * *
17110372 AGGATCACGTCTACCAAATTTGGGGCCAAAACTCCTT-TCAAAAAAATTTTAAAAAATC-CTGAA
453 AGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCT-GAAAAAATTTAAAAAAATCTC-GAA
* * *
17110435 CCGTAAAAAGTTTCAAAAATCGTGAAAAATCGAAAACGAGTCGTCTTGCTATGAAACTTGACGTG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
*
17110500 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCACTGGCACGCAGAAATATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * *
17110565 AATATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTATCTAGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
** * * *
17110630 GGCGTAGTGCCCGCCCGCCTGTCCACCCGCTCGTTTCGTCGATTGGCTTAGGCATACAGAGTTCA
710 GGCGTAGTGCCCGCCCGCC-CACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * * * *
17110695 TTCCCAGTCTAAGATCAAACCAGACTGAGAGTTGCAGCAACAGGATCGGTAGCACGTAGAGGGGG
774 TTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GCAGCAGGATC-GCAGCATGCAGAGGGGG
* * * * * * * * *
17110760 ACCCGGCTGATCCCCGGTTTGCTCATGCCACCCCTCTGGTCGGCTGAGCGCCCGCACGCTCA
837 A-CC-ACTGAT-CCC-GCTTGCGCAT--C-CGCCTCTGGCCGGCTGAGCACCCGTACACTCG
* * * **
17110822 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GAAGTTCATTTCTT
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAG-AGTTCATTCCCA
* * * *
17110886 GTCTAAGATCAGATCGGACCGAGGGTTACGGCAGCACAAGCTAGGCTCGGGCATGTGCTGGTGCC
65 GTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCC
* * ** * *
17110951 GCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCACCAGAGAACCTGACCGGCGGCATTGGG
129 ACATTTTTCTTC-TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGG
* * * *
17111016 ATTCCGGCGATCGGGGCGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
193 GTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
*
17111080 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCACCTTAAAGAGCATTTG
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
*
17111145 AGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
323 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * * *
17111210 GTCACGAAATCTTGTACACTTCGAGTTTTTAGCTGAATT-TTGTTGTACATACGAA-AAAAATAC
388 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTT-TTGTGCATGCCAACAAAAATAC
* * * *
17111273 AACGATCACGTCTACCAAGTTTTGGGCCAAAA-TGCCTTTTGAAAAAATTTTAAAAAATCCCGAA
452 AAGGATCACGTCTACCAAG-TTTGGGCCAAAACT-CCTTCTGAAAAAATTTAAAAAAATCTCGAA
* * * *
17111337 CCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCTATGAAACTTCACGTG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
**
17111402 AAGGCTTAAGTTACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
*
17111467 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * **
17111532 GGCGTAGT----GCCCG---TCTGCCCGCTTATTTCGTCGGTTGGCTTA-GCATACGGAGTTCAT
710 GGCGTAGTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * *
17111589 TCCCAATCTAAGATCGGACCAG-CCTGAGGGTTACGGCAGCAGGATCGGCAGCAAGTAGAGGGGG
775 TCCCAGTCTAAGATCAGACCAGACC-GAGGGTTGC-GCAGCAGGATC-GCAGCATGCAGAGGGGG
* * * * * *
17111653 ACCCAGTCGATCCCCGGCTTGCGCATCCCGCCCCACTGGCCAGCTGAGCGA-TCGCACGCTCG
837 A-CCACT-GAT-CCC-GCTTGCGCAT-CCG--CCTCTGGCCGGCTGAGC-ACCCGTACACTCG
* *
17111715 TTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAG
1 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
* * * * * *
17111780 TCTAAGATCAGACCAAACCGATGGTTGCGGCAGCACATGTTGGGCTCGACCATGTGCTGGTGCCG
66 TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT-GGCTCGAGCATGTGCTGGTGCCA
* * * * *
17111845 CATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGATC-AGCGGCATTGGG
130 CATTTTTC-TTCTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGA-CGGCATTGGG
* * * * *
17111909 GTTCTGGCGATCAGTGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
193 GTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGG
* *
17111973 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGACG-ACTCACATCCCCTTAAAGAACATTT
258 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GAACTCACACCCCCTTAAAGAGCATTT
* * *
17112037 GAGATTTTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTAAAATGGGGACATTTTTTTCAAAT
322 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* *
17112102 GGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATT-TTTTATGCATGCCAACAAAAATAC
387 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC
* * * ** *
17112166 AGGGATCACGTCTACCAAGCTTGGGGCCATAACTCCTT-TCGAAAAAATTTTTAAAAATCCCGAA
452 AAGGATCACGTCTACCAAG-TTTGGGCCAAAACTCCTTCT-GAAAAAATTTAAAAAAATCTCGAA
* **
17112230 CCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
515 CCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* *
17112295 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCACAAAAATGGCATTGGCACACAGAAATATG
580 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * *
17112360 AAGATGTGCCTAAACCCACCTACCACCC-AACGATCCACGGCTTGCACATCCTGTCTCTCTGGCC
645 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
* * * * *
17112424 GGCGTAGTGCCTGCCCGTCCGC-CCGCCTGCTCCTTTCGTGGGTTGACTTAGGCATACGGAGTTC
710 GGCGTAGTGCCCGCCCG-CC-CACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
*
17112488 ATTCCAAGTCTAAGATCAGACCAGACCGAGGGTTGCG
773 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG
17112525 ATAGCACATG
Statistics
Matches: 27014, Mismatches: 4760, Indels: 4191
0.75 0.13 0.12
Matches are distributed among these distances:
833 13 0.00
834 67 0.00
835 2 0.00
836 1 0.00
837 50 0.00
838 321 0.01
840 1 0.00
842 3 0.00
843 2 0.00
844 5 0.00
845 3 0.00
846 4 0.00
847 1 0.00
848 7 0.00
849 269 0.01
850 480 0.02
851 55 0.00
852 109 0.00
853 210 0.01
854 11 0.00
855 97 0.00
856 16 0.00
857 122 0.00
858 24 0.00
859 18 0.00
860 23 0.00
861 185 0.01
862 194 0.01
863 317 0.01
864 84 0.00
865 230 0.01
866 145 0.01
867 189 0.01
868 534 0.02
869 97 0.00
870 868 0.03
871 683 0.03
872 394 0.01
873 397 0.01
874 539 0.02
875 451 0.02
876 525 0.02
877 685 0.03
878 799 0.03
879 966 0.04
880 851 0.03
881 594 0.02
882 230 0.01
883 81 0.00
884 25 0.00
885 228 0.01
886 18 0.00
887 19 0.00
888 8 0.00
889 91 0.00
890 230 0.01
891 273 0.01
892 336 0.01
893 1416 0.05
894 822 0.03
895 178 0.01
896 288 0.01
897 1052 0.04
898 749 0.03
899 509 0.02
900 664 0.02
901 918 0.03
902 2062 0.08
903 949 0.04
904 611 0.02
905 631 0.02
906 389 0.01
907 168 0.01
908 17 0.00
909 23 0.00
910 24 0.00
911 17 0.00
912 14 0.00
913 28 0.00
914 11 0.00
915 20 0.00
916 19 0.00
917 42 0.00
918 41 0.00
919 56 0.00
920 26 0.00
921 34 0.00
922 41 0.00
923 47 0.00
924 32 0.00
925 28 0.00
926 29 0.00
927 28 0.00
928 55 0.00
929 42 0.00
930 60 0.00
931 53 0.00
932 36 0.00
933 35 0.00
934 27 0.00
935 15 0.00
936 33 0.00
937 28 0.00
938 42 0.00
939 37 0.00
940 48 0.00
941 19 0.00
942 36 0.00
943 24 0.00
944 43 0.00
945 33 0.00
946 32 0.00
947 16 0.00
948 37 0.00
949 36 0.00
950 24 0.00
951 34 0.00
952 24 0.00
953 34 0.00
954 16 0.00
955 7 0.00
956 4 0.00
957 9 0.00
958 12 0.00
959 8 0.00
960 12 0.00
961 9 0.00
962 15 0.00
963 18 0.00
964 20 0.00
965 22 0.00
966 20 0.00
967 16 0.00
968 27 0.00
969 39 0.00
970 44 0.00
971 33 0.00
972 64 0.00
973 38 0.00
974 30 0.00
975 21 0.00
976 18 0.00
977 9 0.00
978 23 0.00
979 18 0.00
980 17 0.00
981 9 0.00
982 17 0.00
983 14 0.00
984 30 0.00
985 17 0.00
986 11 0.00
987 11 0.00
988 1 0.00
991 1 0.00
993 4 0.00
994 2 0.00
995 4 0.00
996 7 0.00
997 2 0.00
999 1 0.00
1000 4 0.00
1001 11 0.00
1002 7 0.00
1003 3 0.00
1005 9 0.00
1006 5 0.00
1007 6 0.00
1008 1 0.00
1009 4 0.00
1010 11 0.00
1011 16 0.00
1012 12 0.00
1013 15 0.00
1014 5 0.00
1015 11 0.00
1016 18 0.00
1017 19 0.00
1018 15 0.00
1019 20 0.00
1020 11 0.00
1021 6 0.00
1022 7 0.00
1023 10 0.00
1024 745 0.03
1025 714 0.03
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (891 bp):
TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACAGAGTTCATTCCCAG
TCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCTGGCTCGAGCATGTGCTGGTGCCAC
ATTTTTCTTCTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTT
CCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCC
TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
ACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGG
ATCACGTCTACCAAGTTTGGGCCAAAACTCCTTCTGAAAAAATTTAAAAAAATCTCGAACCGTAA
AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATG
TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
GTGCCCGCCCGCCCACCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
TCTAAGATCAGACCAGACCGAGGGTTGCGCAGCAGGATCGCAGCATGCAGAGGGGGACCACTGAT
CCCGCTTGCGCATCCGCCTCTGGCCGGCTGAGCACCCGTACACTCG
Found at i:17084865 original size:26 final size:26
Alignment explanation
Indices: 17084829--17084880 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
17084819 TTGACTTCGC
*
17084829 CATATAGAGTTAATTCCCAATCTAAG
1 CATACAGAGTTAATTCCCAATCTAAG
* *
17084855 CATACAGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTAATTCCCAATCTAAG
17084881 ATCAGACCAG
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.35, C:0.23, G:0.13, T:0.29
Consensus pattern (26 bp):
CATACAGAGTTAATTCCCAATCTAAG
Found at i:17085706 original size:26 final size:26
Alignment explanation
Indices: 17085670--17085721 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
17085660 TTAACTTTGC
*
17085670 CATACGGAGTTAATTCCCAGTCTAAG
1 CATACGAAGTTAATTCCCAGTCTAAG
*
17085696 CATACGAAGTTGATTCCCAGTCTAAG
1 CATACGAAGTTAATTCCCAGTCTAAG
17085722 ATCGGATCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.31, C:0.23, G:0.19, T:0.27
Consensus pattern (26 bp):
CATACGAAGTTAATTCCCAGTCTAAG
Found at i:17086604 original size:26 final size:26
Alignment explanation
Indices: 17086564--17086619 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
17086554 TGGGTTGACT
17086564 TAAGCATACGAAGTTCATTCCCAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
* * *
17086590 TAAGCATATGGAGTTGATTCCCAGTC
1 TAAGCATACGAAGTTCATTCCCAGTC
17086616 TAAG
1 TAAG
17086620 ATCGGATCAG
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.21, G:0.20, T:0.29
Consensus pattern (26 bp):
TAAGCATACGAAGTTCATTCCCAGTC
Found at i:17087506 original size:26 final size:26
Alignment explanation
Indices: 17087467--17087520 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
17087457 TGGGTTGACT
*
17087467 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACAGAGTTCATTCCCAGTC
*
17087493 TAAGCATATAGAGTTCATTCCCAGTC
1 TAAGCATACAGAGTTCATTCCCAGTC
17087519 TA
1 TA
17087521 TGATCAGACC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.24, G:0.17, T:0.30
Consensus pattern (26 bp):
TAAGCATACAGAGTTCATTCCCAGTC
Found at i:17089288 original size:26 final size:26
Alignment explanation
Indices: 17089252--17089302 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
17089242 TTGACTTAGC
*
17089252 CATATGGAGTTCATTCCCAGTCTAAG
1 CATAGGGAGTTCATTCCCAGTCTAAG
17089278 CATAGGGAGTTCATTCCCAGTCTAA
1 CATAGGGAGTTCATTCCCAGTCTAA
17089303 TATCAGACCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.24, G:0.20, T:0.29
Consensus pattern (26 bp):
CATAGGGAGTTCATTCCCAGTCTAAG
Found at i:17090181 original size:26 final size:26
Alignment explanation
Indices: 17090145--17090197 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17090135 GTTGACTTAG
*
17090145 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
*
17090171 GCATATGGAGTTCACTCCCAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
17090197 G
1 G
17090198 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCACTCCCAGTCTAA
Found at i:17091432 original size:708 final size:710
Alignment explanation
Indices: 17090274--17091583 Score: 1965
Period size: 708 Copynumber: 1.8 Consensus size: 710
17090264 CATCACCGAC
* * * *
17090274 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGTGGTGTGCGCACATGATGTGCGATGGGTGCT
1 GGCATTGGGGTTCCGACGATCGGGGGGCCCGGGGGGGTGTGCACACACGATGTGCGATGGGTGCT
* * *
17090339 GGCACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAA
66 GGCACTTAGCCCTTATATTGACCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
*
17090404 GAGCATCTGAGATTTTACAGGTTCGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
131 GAGCATCTGAGATTTTAAAGGTTCGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* * *
17090469 TTTCTAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTTATGCGTGCCAA
196 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTTATGCATACCAA
* * * *
17090534 CAAAAATACAAGGATCAAGTCTGCCAAGTTTGGGGCCAAAACTCGTTTCTAAAAAATTTTTAAAA
261 CAAAAATACAAGGATCAAGTCTACCAAGTTTGGGGCCAAAAATCGCTTCTAAAAAATTTTAAAAA
*
17090599 ATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCGATGAAAC
326 ATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAAC
** *
17090664 TTCACGTGAAGGGTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATACA
391 TTCACGTGAAGACTTAAAGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATTGGCATACA
*** * *
17090729 GAAATATGAAGATGTGTCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTATCCCGTCT
456 GAAATATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCT
17090794 CTCTGGCCGGCGTAGTG-C-CCC-CCCGCTCGTTTCA-TGTGTTGACTTAGGCATACGGAGCTCA
521 CTCTGGCCGGCGTAGTGCCGCCCGCCCGCTCGTTTCATTG-GTTGACTTAGGCATACGGAGCTCA
17090855 TTCCCAGTCTAAGATCAGACTAGACCGAGGGTTTCAGCAGCACATGCTGGGCTCGAGCATGTGTT
585 TTCCCAGTCTAAGATCAGACTAGACCGAGGGTTTCAGCAGCACATGCTGGGCTCGAGCATGTGTT
17090920 GGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTGGGATAACCTGATCGT
650 GGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTGGGATAACCTGATCGT
** * *
17090981 GGCATTGGGGTTCCGGTGATCTGGGGGCCCGAGTGGGGGTGTGCACACACGATGTGTGATGGGTG
1 GGCATTGGGGTTCCGACGATCGGGGGGCCCG-G-GGGGGTGTGCACACACGATGTGCGATGGGTG
* *
17091046 CTGGTACTTAGCCCTTGTATTGAACCC-CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
64 CTGGCACTTAGCCCTTATATTG-ACCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* * * * *
17091110 AAAGAGCATTTGAGATTTTAAAGGTTTGCTGCCAGTAGCCATTAACGTGTCTGAATTGGGGATAC
128 AAAGAGCATCTGAGATTTTAAAGGTTCGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* * * *
17091175 TTTTTTCAAATTGTCACAAAATCTTGTAC-CGTTTGATTTTTTAGCTGAA-TTTTTTTGTGCATA
193 TTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAAGTTTTTTTATGCATA
* * ** *
17091238 CCAACAAAAATTCAAGGATCATGTCTATGAAGTTTTGGGCCAAAAATC-CTTCTAAAAAAATTTT
257 CCAACAAAAATACAAGGATCAAGTCTACCAAGTTTGGGGCCAAAAATCGCTTCT-AAAAAATTTT
* * * *
17091302 AAAAAATCCCAAACCGTAAAAGGTTTCGTAAAA-CGTGAAAGATAGAAAACGAGT-AGTCTTGCC
321 AAAAAATCCCAAACCGTAAAAAGTTTC-AAAAATCATGAAAAATAGAAAACGAGTCA-TCTTGCC
*
17091365 ATGAAACTTCACGTGAAGACTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATTG
384 ATGAAACTTCACGTGAAGACTTAAAGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATTG
* * *
17091430 GCATGCAGAAATATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCCATGACTTGTGCAT
449 GCATACAGAAATATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCAT
* * *
17091495 CCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGTTCGTTTCGTTGGTTGGCTTAGGCATACG
514 CCCGTCTCTCTGGCCGGCGTAGTG-CCGCCCGCCCGCTCGTTTCATTGGTTGACTTAGGCATACG
*
17091560 GAGTTCATTCCCAGTCTAAGATCA
578 GAGCTCATTCCCAGTCTAAGATCA
17091584 AACCGGACCA
Statistics
Matches: 535, Mismatches: 56, Indels: 19
0.88 0.09 0.03
Matches are distributed among these distances:
707 32 0.06
708 256 0.48
709 188 0.35
710 4 0.01
711 3 0.01
712 50 0.09
713 2 0.00
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Consensus pattern (710 bp):
GGCATTGGGGTTCCGACGATCGGGGGGCCCGGGGGGGTGTGCACACACGATGTGCGATGGGTGCT
GGCACTTAGCCCTTATATTGACCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
GAGCATCTGAGATTTTAAAGGTTCGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTTATGCATACCAA
CAAAAATACAAGGATCAAGTCTACCAAGTTTGGGGCCAAAAATCGCTTCTAAAAAATTTTAAAAA
ATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAAC
TTCACGTGAAGACTTAAAGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATTGGCATACA
GAAATATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCT
CTCTGGCCGGCGTAGTGCCGCCCGCCCGCTCGTTTCATTGGTTGACTTAGGCATACGGAGCTCAT
TCCCAGTCTAAGATCAGACTAGACCGAGGGTTTCAGCAGCACATGCTGGGCTCGAGCATGTGTTG
GTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTGGGATAACCTGATCGT
Found at i:17091736 original size:26 final size:26
Alignment explanation
Indices: 17091700--17091752 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17091690 GTTGACTTAG
17091700 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17091726 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17091752 G
1 G
17091753 ATCAAACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17092932 original size:873 final size:851
Alignment explanation
Indices: 17090817--17093155 Score: 2950
Period size: 873 Copynumber: 2.7 Consensus size: 851
17090807 AGTGCCCCCC
* * *
17090817 CGCTCGTTTCATGTGTTGACTTAGGCATACGGAGCTCATTCCCAGTCTAAGATCAGACTAGACCG
1 CGCTCGTTTCATGTGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCG
* *
17090882 AGGGTTTC-AGCAGCACATGCTGGGCTCGAGCATGTGTTGGTGCCACATTTTTCTTCGTCGGGGC
66 AGGGTTGCGA-CAGCACATGCTGGGCTCG-GCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGC
* * * * * * *
17090946 ACCATC-GTCGGAGCATCG-TGGGATAACCTGATCGTGGCATTGGGGTTCCGGTGATCTGGGGGC
129 ACCATCACT-GAAGCATCGCT-GGAGAACCTGATCGCGGCATTGGGGTTCCAGTGATCGGGGGGG
* * * * *
17091009 CCGAGTGGGG-GTGTGCACACACGATGTGTGATGGGTGCTGGTACTTAGCCCTTGTATTGAACCC
192 CCG-G-GGGGTGTGTG--CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG-GCCC
*
17091073 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAAAGGTTTG
252 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
* * * *
17091138 CTGCCAGTAGCCATTAACGTGTCTGAATTGGGGATACTTTTTTCAAATTGTCACAAAATCTTGTA
317 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * * * *
17091203 C-CGTTTGATTTTTTAGCTGAATTTTTTTGTGCATACCAACAAAAATTCAAGGATCATGTCTATG
382 CAC-TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAA-TAAAGGATCATGTCTA-A
* * * * * *
17091267 AAGTTTTGGGCCAAAAATCCTTCTAAAAAAATTTTAAAAAATCCCAAACCGTAAAAGGTTTCGTA
444 AAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTTG-A
* * *
17091332 AAACGTGAAAGATAGAAAACGAGTA-GTCTTGCCATGAAACTTCACGTGAAGACTTAAGGGACCA
508 AATCGTGAAAAATAGAAAACGAG-ACGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
**
17091396 TTGTATGAATTTACAAGCAATAAAAATGGCATTGGCATGCAGAAATATGAAGATGCACCTAAACC
572 TTGTATGAATTTACAAGCAATAAAAATGGCATTGGCACACAGAAATATGAAGATGCACCTAAACC
* * *
17091461 CACCTACCACCCTATCGATCCATGACTTGTGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC
637 CACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCC
* * *
17091526 GCCCGTTCGTTTCGTTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCGGA
702 GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGA
* * *
17091591 CCAAGGGTTGCGACAGCACACAGACGGGGACCCGAGCGATCCCCAGCTTGCGTATCCCGCCCCTC
767 CCAAGGGTTGCGACAGCACACAGACGGGGACCCGAGCGATCCCCAGCTTGCGCAGCCCACCCCTC
* *
17091656 TGGCCGGTTGAGCACCCGCA
832 TGGCCAGCTGAGCACCCGCA
* *
17091676 CACTCGTTTCGTGTGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCAT
1 CGCTCGTTTCATGTGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-TA---AG---A-
* *
17091741 TCCCAGTCTAAGATCAAACTGGACCGAGGGTTGCGTCAGCACATGCTGGGCTCGGGCATGTGCTG
53 T--C-G-----GA-C---C-AGACCGAGGGTTGCGACAGCACATGCTGGGCTC-GGCATGTGCTG
* * * *
17091806 GGGCCACATTTTTCTTCGTCGGGGCACCATCACCGAAGCATCGCCGGAGAACCTAATCGGCGGCA
104 GTGCCACATTTTTCTTCGTCGGGGCACCATCACTGAAGCATCGCTGGAGAACCTGATC-GCGGCA
** * *
17091871 TTACGGTTCCAATGATCGGGGGGGCCGGGGAGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
168 TTGGGGTTCCAGTGATCGGGGGGGCCGGGG-GGTGTGTGCACATGATGTGCGATGGGTGCTGGTA
*
17091936 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTCACACCCCCTTAAAGAGC
232 CTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
*
17092001 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTC
296 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
*
17092066 AAAAGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA
361 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA
* *
17092131 ATAAACGGATCATGTCTACAAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTGAAAAAATCCT
426 ATAAA-GGATCATGTCTA-AAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCT
* * * *
17092196 GAACCATAAAAAGTTTTGACAATCATGAAAAATAGAAAATGAGACGTCTTGCCATGAAACTTCAC
489 AAACCGTAAAAAGTTTTGA-AATCGTGAAAAATAGAAAACGAGACGTCTTGCCATGAAACTTCAC
* * * * *
17092261 ATGAAGGCTTAACGGACCATTGTATGAATTTACAATCCATAAAAATGGCATTGGCACACCGAAAT
553 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATTGGCACACAGAAAT
** * *
17092326 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTG
618 ATGAAGATGCACCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTG
* * *
17092391 GCCGACGTAGTGCCAGCCCGTCCGCCCGCTCGTTTCGTCGGTTTGCTTATGCATACGGAGTTCAT
683 GCCGACGTAGT----GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * *
17092456 TCCCAGTCTAAGATCGAACCAGACCGAA-GGTTGCTGTAGTAGGATCGACAGCACGCAGAGGCAA
744 TCCCAGTCTAAGATCAAACCAGACC-AAGGGTTGC-G-A-CAGCA-C-ACAG-ACG--G-GG--A
* * * * * * * *
17092520 TCTGGGCGATCCTCGGCTTGCGCAGCCTACCCCTCTGGCTAGCTGAGCGCCCGCA
797 CCCGAGCGATCCCCAGCTTGCGCAGCCCACCCCTCTGGCCAGCTGAGCACCCGCA
* * *
17092575 CGCTCGTTTCATGGGTTGACTTAGGCATATGGAGTTCATTTCCAGTCTAAGATCGGACCAGACCG
1 CGCTCGTTTCATGTGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCG
* **
17092640 AGGGTTGCGACAG-AGCATGCTAGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGC
66 AGGGTTGCGACAGCA-CATGCTGGGCTC-GGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGC
** * * * *
17092704 ACCATCACTGAAGTGTCGCTAGAGAACCTGACCGACGGCATTGGGGTTTTCAGCGATCGGGGGGG
129 ACCATCACTGAAGCATCGCTGGAGAACCTGATCG-CGGCATTGGGG-TTCCAGTGATCGGGGGGG
*
17092769 CCGGGGGGTGTGTGCACATGATGTGGGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTAT
192 CCGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC-TAT
*
17092834 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGC
256 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
*
17092899 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATGTTGTACACT
321 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * *
17092964 TCAAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGTT
386 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATA-AAGGATCATGTCTAA-AAGTT
*
17093029 TGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAT-CTCAAACCGTAAAAAGTTTTGAAAATT
449 TGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCT-AAACCGTAAAAAGTTTTG-AAATC
*
17093093 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
512 GTGAAAAATAGAAAACGAGACGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
17093156 CCGGAGCATC
Statistics
Matches: 1280, Mismatches: 138, Indels: 110
0.84 0.09 0.07
Matches are distributed among these distances:
859 42 0.03
861 1 0.00
864 1 0.00
865 2 0.00
868 2 0.00
871 1 0.00
872 10 0.01
873 442 0.35
874 26 0.02
877 1 0.00
878 2 0.00
880 2 0.00
881 1 0.00
883 6 0.00
884 436 0.34
885 91 0.07
886 32 0.03
887 1 0.00
888 74 0.06
889 3 0.00
890 3 0.00
891 3 0.00
892 1 0.00
893 6 0.00
894 4 0.00
896 1 0.00
897 3 0.00
899 83 0.06
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (851 bp):
CGCTCGTTTCATGTGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCG
AGGGTTGCGACAGCACATGCTGGGCTCGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCAC
CATCACTGAAGCATCGCTGGAGAACCTGATCGCGGCATTGGGGTTCCAGTGATCGGGGGGGCCGG
GGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTATCCCTC
ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
TTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAAAGGATCATGTCTAAAAGTTTGGGGCC
AAAACTCCTTCCAAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTTGAAATCGTGAAAAAT
AGAAAACGAGACGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
AAGCAATAAAAATGGCATTGGCACACAGAAATATGAAGATGCACCTAAACCCACCTACCACCCTA
TCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGTTTCG
TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCAAGGGTTGCGAC
AGCACACAGACGGGGACCCGAGCGATCCCCAGCTTGCGCAGCCCACCCCTCTGGCCAGCTGAGCA
CCCGCA
Found at i:17093559 original size:424 final size:424
Alignment explanation
Indices: 17092771--17093579 Score: 1390
Period size: 424 Copynumber: 1.9 Consensus size: 424
17092761 CGGGGGGGCC
*
17092771 GGGGGGTGTGTGCACATGATGTGGGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCC
1 GGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCC
* * *
17092836 CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCA
66 CTCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATGTTACAGGTTTGCTGCCA
* *
17092901 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATGTTGTACACTTC
131 GTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
*
17092966 AAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGTTTG
196 AAGTTTTTAGCTAAATTTTTTCGTGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGTTTG
* * * *
17093031 GGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCAAACCGTAAAAAGTTTTGAAAATTGTG
261 GGGACAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTTGAAAATCGTC
* * *
17093096 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGCCGGA
326 AAAAAAAGAAAACGAATCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGCCGGA
17093161 GCATCGTCCGGAGACATTGGTGTTCCGGCGATCG
391 GCATCGTCCGGAGACATTGGTGTTCCGGCGATCG
*
17093195 GGGGGGTGT-TCGCACATGGTGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCC-TAT
1 GGGGGGTGTGT-GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC-CCTTAT
17093258 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATGTTACAGGTTTGCTGC
64 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATGTTACAGGTTTGCTGC
17093323 CAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
129 CAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* *
17093388 TCAAGTTTTTAGCTGAATTTTTTCGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
194 TCAAGTTTTTAGCTAAATTTTTTCGTGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGTT
** *
17093453 TGGGGACAAAACTCCTTCTGAAAAAATTTTAAAAAATC-CTGAACCGCAAAAAGTTTTGAAAATC
259 TGGGGACAAAACTCCTTCCAAAAAAATTTTAAAAAATCTC-AAACCGCAAAAAGTTTTGAAAATC
17093517 GTCAAAAAAAGAAAACGAATCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
323 GTCAAAAAAAGAAAACGAATCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
17093580 TATGAATTTA
Statistics
Matches: 362, Mismatches: 20, Indels: 6
0.93 0.05 0.02
Matches are distributed among these distances:
423 2 0.01
424 358 0.99
425 2 0.01
ACGTcount: A:0.31, C:0.21, G:0.21, T:0.28
Consensus pattern (424 bp):
GGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCC
CTCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATGTTACAGGTTTGCTGCCA
GTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
AAGTTTTTAGCTAAATTTTTTCGTGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGTTTG
GGGACAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTTGAAAATCGTC
AAAAAAAGAAAACGAATCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGCCGGA
GCATCGTCCGGAGACATTGGTGTTCCGGCGATCG
Found at i:17094814 original size:26 final size:26
Alignment explanation
Indices: 17094785--17094838 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
17094775 CATTGACTTG
17094785 AGCATACAGAGTCCATTCCCAGTCTA
1 AGCATACAGAGTCCATTCCCAGTCTA
*
17094811 AGCATACAGAGTTCATTCCCAGTCTA
1 AGCATACAGAGTCCATTCCCAGTCTA
17094837 AG
1 AG
17094839 ATCATACTGG
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.31, C:0.28, G:0.17, T:0.24
Consensus pattern (26 bp):
AGCATACAGAGTCCATTCCCAGTCTA
Found at i:17095661 original size:850 final size:857
Alignment explanation
Indices: 17094012--17097960 Score: 4362
Period size: 897 Copynumber: 4.5 Consensus size: 857
17094002 TGCTGTGCTG
** * * *
17094012 CATTTTTTTTCACCGGGGCACCATCGCCAGAGAACCTGACC-GACGGCATTAGGGTTCTGGCGAT
1 CATTTTTTTTCGTCGGGGCACCATCGCCAAAGAACTTGACCAG-CGGCATTGGGGTTCTGGCGAT
* *
17094076 C-GAGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
65 CGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGG
*
17094140 CCCCCTATCCCTCATCAAACCTCCAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
130 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
17094205 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
195 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* *
17094270 TGTACACTTCGACTTTTTAGCTGAAATTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCT
260 TGTACACTTCGAGTTTTTAGCTGAAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * * *
17094335 ACGAAGTTTGGTGCCAAAAATCCTTCCAAAAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTC
325 ACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTC
* *
17094400 AAAAATCGTGAAAAATAGAAAACGAGTGGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
389 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
***
17094465 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTG-CTAAA
454 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAA
* * * *
17094529 CCCACCAACCACCCTATCGATACACGGCTTGA-GCATCCCGTCTCTCTAGCTGGCGTAGTGCCCA
519 CCCACCTACCACCCTATCGATCCACGGCTT-ACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-
* ** * ** *
17094593 TCCGCCCGCTTGCTCATTTCGTCGGTTGTTTTGGGCATACGGAGTTCATTCCCAGTCTAAGATCA
582 GCC-CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * *
17094658 GAGT-GGACCGAGGGTTGTGACAGTAAGATCGGCAGCATGCAGAGGGGGACCCGGTCGATCCTC-
646 GA-TCGGACCGAGGGTTATGGCAGCAAGATCGGCAGCACGCAGAGGGGGACCC-GCCGATCCCCG
* * * * * *
17094721 AGCATGCGCATCCCGCCCTTCTGGCCGACTGAACGCCCGCACGCTCATTTCATGCATTGACTT-G
709 A-CTTGCGCATCCCGCCCCTCTGGCCGATTGAACGCCCGCACGCTCGTTTCGTGCGTTGACTTAG
* *
17094785 AGCATACAGAGTCCATTCCCAGTCTAAGCATAC-AGAGTTCATTCCCAGTCTAAGATCATACTGG
773 -GCATACAGAGTTCATTCCCAGTCTAAGCATACGA-AGTTCATTCCCAGTCTAAGATCAGACTGG
17094849 AC-C-G-A-G-GGT-GC-C-GT
836 ACGCAGTATGAGGTGGCGCGGT
* * *
17094863 -ATTTTTTTTCGCCGGGGCACCATCGCCAAAGAACTTGACCAGCGGTATTGGGGTTCTGACGATC
1 CATTTTTTTTCGTCGGGGCACCATCGCCAAAGAACTTGACCAGCGGCATTGGGGTTCTGGCGATC
* * *
17094927 GGGGGGGTCGGGGGGTGTGCGCAGATGATGTGCGATGGGTGCTAGTACTTGG-CATTATATTGGC
66 GGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGC
* *
17094991 CCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGA
131 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
*
17095056 TTGCTGCCAGTAGGCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT-TT
196 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
* * * *
17095120 GTACACTTTGAGTTTTTAGCTGAAATTTTTTATGCATGCCAACAAAAATACAAGGATCACGTATG
261 GTACACTTCGAGTTTTTAGCTGAAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
*
17095185 CCAAGTTTGGGGCCAAAACTCCTTCCAAAAAATTTTTAAAAAATCCCGAACCGCAAAAAGTTTCA
326 CCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA-TTTTAAAAAATCTCGAACCGCAAAAAGTTTCA
* * * * * *
17095250 AAACTCGTGAAAAATAGAAAACGAGCCGCCTTGACATGAAACTTCACGTGAAGGCTTAGGGGACC
390 AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* * * *
17095315 ACTGTATGAATTTACACGTCATAAAAATGGCATTGCCACATAGAAATATGAAGATGTGCCTAAAC
455 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAAC
* *
17095380 CCACCTACCACCCTATCGATCCACGACTTACGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCC
520 CCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-C
** * *
17095445 CCCCTGCCCGCTCGTTTAATCGTTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGA
584 CCCC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA
* * ** * * * * *
17095510 TCGGACCGAGGGTTATGGTAGCAGGATCAACAGCTCGTAGAGGAGGACCTGCCCGATCCCCGACG
648 TCGGACCGAGGGTTATGGCAGCAAGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCCCCGACT
* *
17095575 TGCGCATCCCGCCCCTCTGGCCGATTGAACACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCAT
712 TGCGCATCCCGCCCCTCTGGCCGATTGAACGCCCGCACGCTCGTTTCGTGCGTTGACTTAGGCAT
*
17095640 ACAGAGTTCATTCCTAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAG
777 ACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGAT-----CAGACT---
* *
17095705 GGTTGCGGCAGATATGCTGGGCTCGGGCATGTGCTGGT
834 GG--AC-GCAG-TATG--AGG-T--GGC----GC-GGT
* * * * * * *
17095743 GCAACACTTTTCTTCGTCAGGGCACCATCACCTAAGCATCGCCGGAGAACCTAACCGGCGGCATT
1 ----CATTTTTTTTCGTCGGGGCACCATCGCC--A--A-------AGAACTTGACCAGCGGCATT
* * * * *
17095808 GGGGTTCTGGCGATCGAGGGGTCCGAGGGGTGTGCGCACATGATTTGCGATGGGTGCTGGTACTT
51 GGGGTTCTGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTT
* * * *
17095873 GGCAAC-TATATTGGCTCTCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCAT
116 GGC-CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
* * *
17095937 TTGATATTTTACAGGTTTGCTACCGGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
180 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
17096002 AT-GTCACAAAATCTTGTACACTTCGAGTTTTTAG--GAGAATTTTTTGGTGCATGCCAACAAAA
245 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA-AATTTTTT-GTGCATGCCAACAAAA
17096064 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTC
308 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTAAAAAATCTC
* * * *
17096129 AAACCACAAAAAGTTTCAAAAATCATCAAAACTAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
372 GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
* ** *
17096194 GTGAAGGCTTAAGGCACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAATT
437 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAAT
* * * *
17096259 ATGAAGACGTGCCTAAGCCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTG
502 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCTCTG
* * * * * *
17096324 GCCGACGTAGTG-CC-CACCCGCCCGCCCGTTTCGTCGATTAGCTTAGCCATACGGAGTTCATTC
567 GCCGGCGTAGTGCCCGCCCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * * * * * * *
17096387 CCAGTCTAAGAACAGACCAGACCAAGGGTCACGGTAGGAAAATCGGCAGCACGCAGAGGGGGACC
632 CCAGTCTAAGATCAGATCGGACCGAGGGTTATGGCAGCAAGATCGGCAGCACGCAGAGGGGGACC
** * * ** * *
17096452 CGACCGATCTTCGGCTTACGCATCCCGCCTTTCTGGCCGACTT-AGCGCCCGCACGCTTGTTTCG
697 CG-CCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGA-TTGAACGCCCGCACGCTCGTTTCG
* *
17096516 TGGGTTGACTTAGGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTA
760 TGCGTTGACTTA-GGCATACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTA
* *
17096581 AGATCAGACTGGACCGAGAGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
824 AGATCAGACTGGA-C----------GCAG--TATG--AGG-T--GGC----GC-GGT
* * * * * *
17096638 GCCGCATTTTTCTTCGTCAGGACACCATCGTCGGAGAATCGTCGGAGAACCTGACCGGCGGCATT
1 ----CATTTTTTTTCGTCGGGGCACCATCG-C---CAA-------AGAACTTGACCAGCGGCATT
* *
17096703 GGGGTTCCGGCGATCGGGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGTTGGGTGCTAGTAC
51 GGGGTTCTGGCGATCGGGGGGGCC--GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTAC
* * *
17096768 TTGGCCCTTATATTGGCCCCCTATCCCGCATCTAACCTCGAGAACTCACACCCCCTTAAAGAACA
114 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
* * * * ** *
17096833 TTTGAGATTTTATAGGTTTGCTACCAATAGCAATTAAAGTGTCTGAAATGGGGATGCTTTTCTCA
179 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
* *
17096898 AATGGTCACAAAATCTTGAACACTTCGAGTTTTTAGCTAAAATTTTTTGTGCATGCCAACAAAAA
244 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTGTGCATGCCAACAAAAA
* *
17096963 TTCAAGGATCACGTCTACCAAGTTTGGGGCTAAAACAT-CTTCCGAAAAAATTTTAAAAAATC-C
309 TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-TCCTTCC-AAAAAATTTTAAAAAATCTC
* *
17097026 TAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
372 -GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
17097091 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA-A-A
436 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA--CATAGA
* * * *
17097154 AATATGAATATGTGCCTAAACCCACCTACCACCCTATCGATCGACGGCTTGCGTATCCCGTCTCT
499 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCT
* *
17097219 CTGG-CGTGC--AGTGCCCG--CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGAAGTT-
564 CTGGCCG-GCGTAGTGCCCGCCCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
* * *
17097278 ATTTCCCAATCTAAGATCTGATCGGA-CGAGAGTTATGGCAGC-AGCATCGGCAGCACGCAGAGG
628 A-TTCCCAGTCTAAGATCAGATCGGACCGAGGGTTATGGCAGCAAG-ATCGGCAGCACGCAGAGG
* ** * * * * * *
17097341 GGGACCCAAGCCGATCCCCTG-TTTGCAAATGCCGCCACTCCGGCCG-TTGAGCGCCCTCGCGCT
691 GGGACCC--GCCGATCCCC-GACTTGCGCATCCCGCCCCTCTGGCCGATTGAACGCCCGCACGCT
* * * *
17097404 CGTTTCGTGCGTTGAGTTAGGCACACGGAGTTCATTCCCAGTCTAAGAGCAGACTAGACCGAGGG
753 CGTTTCGTGCGTTGACTTAGGCATACAGAGTTCATTCCCAGTCT-A-AGC--A-T--A-CGA-AG
** * * * * * * *
17097469 TT-A-TGGCAG-C--ACAT--G-CTGGGCTCAGTCATGTGCTGGTGCCG-
809 TTCATTCCCAGTCTAAGATCAGACTGGACGCAGT-ATGAGGTGGCGCGGT
* * * *
17097510 CATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGGTGGCATTGGGG
1 CATTTTTTTTCGTCGGGGCACCATCGCC--A--A-------AGAACTTGACCAGCGGCATTGGGG
* * *
17097575 TT-TCGGCTATCGGAGGGGCCGGGAGGGGGGTATGCGCACATGATGTGCGATGGGTGCTAGTACT
55 TTCT-GGCGATCGGGGGGGCC----GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACT
* * *
17097639 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAACTCATTAAAGAGCAT
115 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
17097704 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
180 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
*
17097769 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAAATTTTTTGTGCATGCCAACAAAAAT
245 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTGTGCATGCCAACAAAAAT
* * *
17097834 ACAATGATCACGTCCACCAAGTTTAGGGCCAAAACTCCTTCCTAAAAAATTTTAAAAAATCTCGA
310 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTAAAAAATCTCGA
* **
17097899 ACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
374 ACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
17097961 TGAGATTTTA
Statistics
Matches: 2673, Mismatches: 306, Indels: 219
0.84 0.10 0.07
Matches are distributed among these distances:
848 6 0.00
849 232 0.09
850 449 0.17
851 51 0.02
855 5 0.00
858 2 0.00
860 1 0.00
862 1 0.00
863 1 0.00
865 1 0.00
866 2 0.00
867 1 0.00
868 70 0.03
869 3 0.00
870 334 0.12
871 1 0.00
873 3 0.00
874 2 0.00
878 3 0.00
880 3 0.00
881 1 0.00
883 3 0.00
884 3 0.00
885 23 0.01
886 2 0.00
887 1 0.00
889 7 0.00
893 149 0.06
894 93 0.03
895 169 0.06
896 184 0.07
897 547 0.20
898 295 0.11
899 11 0.00
900 2 0.00
901 5 0.00
902 4 0.00
903 3 0.00
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.25
Consensus pattern (857 bp):
CATTTTTTTTCGTCGGGGCACCATCGCCAAAGAACTTGACCAGCGGCATTGGGGTTCTGGCGATC
GGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGC
CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
GTACACTTCGAGTTTTTAGCTGAAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
CCAAGTTTGGGGCCAAAACTCCTTCCAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAA
AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACC
CACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC
CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCG
GACCGAGGGTTATGGCAGCAAGATCGGCAGCACGCAGAGGGGGACCCGCCGATCCCCGACTTGCG
CATCCCGCCCCTCTGGCCGATTGAACGCCCGCACGCTCGTTTCGTGCGTTGACTTAGGCATACAG
AGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACTGGACGCAGTATG
AGGTGGCGCGGT
Found at i:17095673 original size:26 final size:26
Alignment explanation
Indices: 17095636--17095688 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
17095626 GTTGACTTAG
*
17095636 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17095662 GCATAC-GAAGTTCATTCCCAGTCTAA
1 GCATACAG-AGTTCATTCCCAGTCTAA
17095688 G
1 G
17095689 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17096567 original size:26 final size:26
Alignment explanation
Indices: 17096530--17096582 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17096520 TTGACTTAGG
*
17096530 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17096556 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17096582 G
1 G
17096583 ATCAGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17096737 original size:897 final size:893
Alignment explanation
Indices: 17094883--17112521 Score: 17034
Period size: 893 Copynumber: 19.7 Consensus size: 893
17094873 GCCGGGGCAC
** * * * * * *
17094883 CATCGCCAAAGAACTTGACCAGCGGTATTGGGGTTCTGACGATCGGGGGGGTC-GGGGGGTGTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
* * *
17094947 GCAGATGATGTGCGATGGGTGCTAGTACTTGG-CATTATATTGGCCCCCTATCCCTCATCAAACC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * *
17095011 TTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGATTGCTGCCAGTAGGCATTAA
131 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
*
17095076 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT-TTGTACACTTTGAGTTTTTAGC
196 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * *
17095140 TGAAATTTTTTATGCATGCCAACAAAAATACAAGGATCACGTATGCCAAGTTTGGGGCCAAAACT
261 TG-AATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * *
17095205 CCTTCC-AAAAAATTTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAACTCGTGAAAAATAGAA
325 CCTTCCGAAAAAA-TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* * * * * * *
17095269 AACGAGCCGCCTTGACATGAAACTTCACGTGAAGGCTTAGGGGACCACTGTATGAATTTACACGT
389 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* **
17095334 CATAAAAATGGCATTGCCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * * **
17095399 TCCACGACTTACGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCCCCTGCCCGCTCGTTTAA
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG---CCC-GCCCGCCCGTTTCG
* * * * * *
17095464 TCGTTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTATGGT
580 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGC
** * * * * * * *
17095529 AGCAGGATCAACAGCTCGTAGAGGAGGACCTGCCCGATCCCCGACGTGCGCATCCCGCCCCTCTG
645 AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * *
17095594 GCCGATTGAACACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCTAGTC
710 GCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
17095659 TAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAG-ATATGCT
775 TAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GACCGGACCGA-GGTTGCGGCAGCACATGCT
** * * * **
17095723 GGGCTCGGGCATGTGCTGGTGCAACACTTTTCTTCGTCAGGGCACCATCACCTAAG
838 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
17095779 CATCGCCGGAGAACCTAACCGGCGGCATTGGGGTTCTGGCGATCGAGGGGTCC-GAGGGGTGTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
* * * *
17095843 GCACATGATTTGCGATGGGTGCTGGTACTTGGCAAC-TATATTGGCTCTCTATCCCTCATCAAAC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGC-CCTTATATTGGCCCCCTATCCCTCATCAAAC
* * * *
17095907 CTCAAGAACTCACACCCCCTTAAAGAGCATTTGATATTTTACAGGTTTGCTACCGGTAGCCATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
17095972 AAGTGTCTGAAATGGGGACACTTTTTTCAAAT-GTCACAAAATCTTGTACACTTCGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
**
17096036 GAGAATTTTTTGGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
260 CTGAATTTTTT-GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * ** * * *
17096101 TCCTTCCAAAAAAATTTTAAAAAATCTCAAACCACAAAAAGTTTCAAAAATCATCAAAACTAGAA
324 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
*
17096166 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGCACCATTGTATGAATTTACAAGC
389 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* * * * *
17096231 CATAAAAATGGCATTGGCATGTAGAATTATGAAGACGTGCCTAAGCCCACCTACCACCCTATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * *
17096296 TCCACGGCTTGCGCATCCCATCTCTCTGGCCGACGTAGTGCCCACCCGCCCGCCCGTTTCGTCGA
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTCGG
* * * * * * *
17096361 TTAGCTTAGCCATACGGAGTTCATTCCCAGTCTAAGAACAGACCAGACCAAGGGTCACGGTAGGA
584 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCA
** ** * **
17096426 AAATCGGCAGCACGCAGAGGGGGACCCGACCGATCTTCGGCTTACGCATCCCGCCTTTCTGGCCG
649 GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* *
17096491 ACTTAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGGCATACGGAGTTCATTCCCAGTCTAA
714 ACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTA-GGCATACGGAGTTCATTCCCAGTCTAA
* *
17096556 GCATACGAAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGAGTTGTGGCAGCACATGCTGGG
778 GCATACGAAGTTCATTCCCAGTCTAAGATC-GACCGGACCGAG-GTTGCGGCAGCACATGCTGGG
* * *
17096621 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCAGGACACCATCGTCGGAG
841 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* *
17096674 AATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGAGGGGGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGGTGTG
* * * *
17096739 CGCACATGATGTGCGTTGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCGCATCTAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * * * *
17096804 CTCGAGAACTCACACCCCCTTAAAGAACATTTGAGATTTTATAGGTTTGCTACCAATAGCAATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
** * *
17096869 AAGTGTCTGAAATGGGGATGCTTTTCTCAAATGGTCACAAAATCTTGAACACTTCGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *
17096934 CTAAAATTTTTTGTGCATGCCAACAAAAATTCAAGGATCACGTCTACCAAGTTTGGGGCTAAAAC
260 CT-GAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* *
17096999 AT-CTTCCGAAAAAATTTTAAAAAATC-CTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAG
324 -TCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
17097062 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
387 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * *
17097127 GCCATAAAAATGGCATTGGCATGCAAAAATATGAATATGTGCCTAAACCCACCTACCACCCTATC
452 GCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * * *
17097192 GATCGACGGCTTGCGTATCCCGTCTCTCTGG-CG-TGCAGTGCCCGCCCGCCCGCTCGTTTCGTC
517 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTC
* * * * * * * *
17097255 GGTTGGCTTAGGCATATGAAGTT-ATTTCCCAATCTAAGATCTGATCGGA-CGAGAGTTATGGCA
582 GGTTGGCTTAGGCATACGGAGTTCA-TTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCA
* * * * ** * * *
17097318 GCAGCATCGGCAGCACGCAGAGGGGGACCCAAGCCGATCCCCTGTTTGCAAATGCCGCCACTCCG
646 GCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * *
17097383 GCCG-TTGAGCGCCCTCGCGCTCGTTTCGTGCGTTGAGTTAGGCACACGGAGTTCATTCCCAGTC
710 GCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* **
17097447 T----A-A-G-AG--------CAGACT---A--GACC-GA--G-GGTTATGGCAGCACATGCTGG
775 TAAGCATACGAAGTTCATTCCCAGTCTAAGATCGACCGGACCGAGGTTGCGGCAGCACATGCTGG
* *
17097488 GCTCAGTCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
840 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
17097542 CATCGCCGGAGAACCTGACCGGTGGCATTGGGGTTTCGGCTATCGGAGGGGCCGGGAGGGGGGTA
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC--G-GGGGGGTG
*
17097607 TGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
63 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * *
17097672 ACCTCGAGAACTCACAACTCATTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
128 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
17097737 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
193 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * *
17097802 AGATGAAATTTTTTGTGCATGCCAACAAAAATACAATGATCACGTCCACCAAGTTTAGGGCCAAA
258 AGCTG-AATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* ** *
17097867 ACTCCTTCCTAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAG
322 ACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
** * * * *
17097932 AAAACGAGTCGTCTTGCCATGAAACTTCA--TG-AGATTTTACA-GG---TTTG-CTGCCA-GT-
387 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG-GCTTA-AGGGACCATTGTATG-AATTTA
* * * * * **** * * * **
17097987 --AGCCATTAAAGTGTCTGAAATGG--GGACACTTTTTTCAA-ATG-GTCACAAAATCTTGTACA
449 CAAGCCATAAAAATG---GCATTGGCACG-CAGAAATATGAAGATGTG-C-CTAAA-C--CCAC-
* * *** * * * ** *** * ***** * * * *
17098046 CTTCGAGTTTTTAGCTGAACATTTTTGTGCATGCCAACAAAAAATCAAGGATC-ACGT-CTACCA
504 CTACCACCCTATCGATCCAC-GGCTTGCGCAT-CC--C-GTCTCTC-TGG-CCGACGTAGTGCC-
* *** ** **** * *** * * ***
17098109 TGTTTAGGGCCAAAACTCC-TTTCGAAAAATT--TTTAAAAAATCCTGAACCGCAAAAAGTTTCA
561 CG---CCCGCC--CGC-CCGTTTCG-TCGGTTGGCTT-AGGCATAC-GGA--G--TTCA--TTC-
** * * * * ** * *** * * ** * * *
17098171 AAAATCGTGAAAAACAAAAAATGAGTC-ATCTTTTCATGAAACTTCACTTGA-AGGCTTAAGGGA
610 CCAGTC-T-AAGATCAGACCA-GA-CCGA-GGGTT-ACG--GCAGCA--GGATCGGC---A-GCA
* * ** * **** * * *** * *
17098234 C-CATTGA-GTGAATTTACAAGCC-ATAAAAATGGCATTG-GCATGCAG-AAATATGG-AGA-TG
661 CGCA--GAGGGGGA--CCCGA-CCGAT--CCCCGGC-TTGCGCATCCCGCCCCTCTGGCCGACTG
* * * * * *** * ** *
17098292 TGC-CTAAACCAGCCTAC-CACCCTATCAAT-CCATGGCTT-GCGCAT-C-CCG-TC--TCCCTG
718 AGCGC----CC-G-C-ACGC-TCGTTTC-GTGGGTTGACTTAG-GCATACGGAGTTCATTCCCAG
* * * ** * ** ** * *** *
17098348 GCT-GGCGT--GGTGTTC--GCCC-G-C-CCGCCCGCCCGCTTGTTTTGTCGGTT--GGCTTAG-
773 TCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGACCG---G-ACCG-AGGTTGCGGC--AGC
* * * *** * * ****** * **
17098402 GCATAC-GGAGTTCATTCCCA-GT-CTAAGATAGGACCGGACCGAGGGTT-GT-GGTAGCAGGAT
831 ACATGCTGG-GCTC--GGGCATGTGCT--GGT--G-CCGCA-TTTTTCTTCGTCGG-GGCACCAT
***
17098462 CAGCAACA-
886 C-GCCGGAG
** * * * * * ** * ** * ** * * * *
17098470 CA-CAGAAGGGGACCCGGTTGATCC-CCGAC-TTGCGCATCCCGC-CCCTTGGCTGGCTGAGCGC
1 CATC-GCCGGAGAACC---TGA-CCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGGCCGGGGGG
** * * * * * **** *
17098531 CCGTACGCTC--G-T-TTC-AT-GG-GAT-G-ACTTAGG--C--ATA-CGGAGTTC-ATTCC-CA
60 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTT-GGCCCTTATATTGGCCCCCTATCCCTCA
* ** * *** * * * **** *
17098580 GTCTAAGATCG-GAA--CAGACCGAGGGTTGCGACGATAGCA-CATGCTGGGCTCGGGCAAG--T
124 -TCAAACCTCGAGAACTCACACC--CCCTT---A--A-AG-AGCAT-TTGAGATTTTACAGGTTT
* ** * *** * *** ** * * ** *
17098639 GCTG---GT-GCC-GT-ATTTTTC-CCCACGGGG-CAACCATCGCTGGAGCATCGTCGGAGAA-C
178 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC-A-C-TTTTTTCA-AATGGTCACAAAATC
* * * * *** * *** *** * ** * ** ** *
17098695 CTGACCGACAGCATTGGGGTTCCGATGATCGAGGGGGCTGGGGGGTGTGCACACCTGATGTGCGA
239 TTG---TACA-C-TTCGAGTTTTTA-GCT-GA---ATTTTTTGTGCATGC-CAACAAAAATAC-A
* * * * ** *** ** *
17098760 TGGGTGC-CGGTACTTGGCCCTTA-TATTGGCCTCCTATCCCTCATCAAACCTCAAGAACTCACA
292 AGGAT-CAC-GT-C-T--ACC-AAGT-TTGG-GGCC-AAAACTC--C-TTCC-GAA-AA---A-A
* * * ** * * * ** ** * * *
17098823 CTCCCTTAAAGAGCAT-TTGAGA-TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTATCTA-AA
338 -T--TTTAAA-A-AATCTCGA-ACCGTAAAAAG-TT--T--CAAAAATCGTGAAA--A-ATAGAA
* ** * * * * ** * * ***
17098885 AAGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TCCG-AGTTTTTAGCTGATTTTT
389 AA--CGAGTCGTCTTGC-CAT-G-----AAA-C-T-T-CACGT--GAAGGCTTAAG-GGA-CCAT
* * * ** * * * * *
17098948 TTTGTGCA-TGCCAA--CAAAAAAATAAGG-A-T--CACGTCTACCAAGT-T-TAG--G-GCCAA
437 TGTATGAATTTACAAGCCATAAAAAT--GGCATTGGCACG-C-A-GAAATATGAAGATGTGCCTA
** ** *** *** ** **** ***
17099001 AACTCCTTCTGGAAAAATTTTAAAAAATCCTA-AAC---CGCAAAAAGT-T-T-T-GAAAATCGT
497 AAC-CCACCT---ACCACCCT-ATCGATCC-ACGGCTTGCGCATCCCGTCTCTCTGGCCGA-CGT
************ * * * ** * * ***
17099058 -GAAAAATAAAAAACG--AG--TCGTC--TTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCA
555 AGTGCCCGCCCGCCCGCCCGTTTCGTCGGTTGGC-TTAGGCAT-ACG-G-A-G-TT-CATTCCCA
* * * * * * *** * * ** * * *
17099116 TTGTATGAATTTAAATGCCATAAAAATGGCATT--GGCATGCAGAAATATGAAG-ATTTGCCTAA
613 GTCTAAG-A-TCAGA--CCAGACCGA-GG-GTTACGGCA-GCAG-GATCGGCAGCA--CG-C-AG
***** * ** * * * * **
17099178 ACCCACCTACCAC-ACTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGCGGGGATCCA
666 A--GGGGGACC-CGAC---CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCC-
* * *** * * * *
17099242 CGGCTTGCGCATCCCGTCTCTC-TGGCCAGCGTAGTGCCCGCCCGCCGGCCCTCTCGTCAGCTCA
724 C-GC--ACGC-T--CGT-T-TCGT-G---G-GT--T----G-ACTTAGG-CAT-ACG-GAGTTCA
* * ** * *
17099306 TTTCGTCGGTTGGCTTTGGCTTAC-AGAGTTCATTTCCAGTCTAATG-TCGGACCGGACCGAGGG
766 -TTC-CCAG-T--C-TAAGCATACGA-AGTTCATTCCCAGTCTAA-GATC-GACCGGACCGA-GG
* * **
17099369 TTGCGACAGCACCTGCTGGGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCAT
821 TTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAT
**
17099434 CGTTGGAG
886 CGCCGGAG
* * * **
17099442 CATCGCCGGAGAACTTAACCGACGGCATTGGGGTTCCGATGATCGGGGGGGCCGGGGGGGTGTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
*
17099507 GCACATGATGTGCGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTCATCAAACC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
** * *
17099572 TCGAGAACTCACACCCCCTTAAAGAAAATTTGAGGTTTTACATGTTTGCTGCCAGTAGCCATTAA
131 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* * *
17099637 AGTGTTTGAAATGGGGACACTTTTTTTAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGC
196 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
17099702 TGAATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
261 TGAAT-TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* **
17099767 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCTTAAAAAGTTTTGAAAATCGTGAAAAATAGAAA
325 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
* * *
17099832 ACGAGTCGTCTTGCCATGAAACTTCACGTTATGTG-TTAAGGGACCATTCTATGAATTTACAAGC
390 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAG-GCTTAAGGGACCATTGTATGAATTTACAAGC
*
17099896 CATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* *
17099961 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCCGCCGCCCGCCCGCTCATTTC
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGC-CCGCCCGCCCG----TTTC
** * * * *
17100026 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACCAAGGGTTGCGG
579 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGG
* * * ** *
17100091 CAGCAGGATCGACAGCATGCCGAGGGGGACCCGATTGATCCCCAGCTTGCGCATCCCGCCCCTCT
644 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * * * * *
17100156 GGTCGATTGAGCACCCGCAAGCTCGTTTCGTCGGTTGACTTAGGCATACGAAGTTCATTCCCAGT
709 GGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * *
17100221 CTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGAACCAGACCGAGGGTTGTGGTAGCACATGC
774 CTAAGCATACGAAGTTCATTCCCAGTCTAAGATCG-ACCGGACCGA-GGTTGCGGCAGCACATGC
* * * * *
17100286 TGGGCTTGGGCATGTGTTGGTGCCGCATTTTTCATCGTCGGGGCACTATCGTCGGAG
837 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* ** * * * * * *
17100343 CATCGTCGGAGAACCTGATTGGTGGCATTGAGGTTCCGGTGATCAGGGGTGTCGGGGGGGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGGCCGGGGGGGTGTG
* **
17100408 CGCAAATGATGTATGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
** * *
17100473 CTCGAGAACTCACACCCCCTTAAAGAAAATTTGAGGTTTTACATGTTTGCTGCCAGTAGCCATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
17100538 AAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
*
17100603 CTGAATGTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
260 CTGAAT-TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * ** * *
17100668 TCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCTTAAAAAATAGAA
324 TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* * *
17100733 AACGAGTCGTCTTGCCATGAAACTTCACGTTATGTG-TTAAGGGACCATTCTATGAATTTACAAG
389 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAG-GCTTAAGGGACCATTGTATGAATTTACAAG
*
17100797 CCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
453 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * *
17100862 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCCG-CATAGTGCCCGCCCGCCCGCTCATTTCGTC
518 ATCCACGGCTTGCGCATCCCGTCTCTCTGG-CCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTC
** * * * *
17100926 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACCAAGGGTTGCGGCAG
582 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAG
* * ** *
17100991 CAGGATCGACAGCATGGC-GAGGGGGACCCGATTGATCCCCAGCTTGCGCATCCCGCCCCTCTGG
647 CAGGATCGGCAGCA-CGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * * * *
17101055 TCGATTGAGCACCCGCAAGCTCGTTTCGTCGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCT
711 CCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* *
17101120 AAG-AT-CG-A----A----C---C----A--GACC-GA--G-GGTTGTGGTAGCACATGCTGGG
776 AAGCATACGAAGTTCATTCCCAGTCTAAGATCGACCGGACCGAGGTTGCGGCAGCACATGCTGGG
* * * * *
17101161 CTTGGGCATGTGTTGGTGCCGCATTTTTCATCGTCGGGGCACTATCGTCGGAG
841 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * ** * * * * *
17101214 CATCGTCGAAGAACCTGATTGGTGGCATTGGGGTTCCGGTGATCAGGGGTGTCGGGGGGGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGGCCGGGGGGGTGTG
**
17101279 CGCACATGATGTATGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
*
17101344 CTCGAGAACTCACACTCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
17101409 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTGAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *
17101474 CTGAATTTTTTTGTGCATGCCAACCAAAATACAAGGATCACGTCTACCAAGTTTGGAGACC-AAT
260 CTGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG-GGCCAAAA
* * *
17101538 CTTCTTCCGAAAAAATTTTAGAAAAT-TCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAG
323 CTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
* * * * *
17101602 AAAACGAATCATCTTGCCATGAAACTTCACGTAAAGGCTTAAGGGACCATTGTATGAATTTTCAG
387 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * *
17101667 GCCATAAAAATGGCATTGGCACGTAGAAATATGCAGATGTGCCTAAACCCACCTACAACCCTATC
452 GCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
** * * * *
17101732 GATCCACAACATGCGCATCCCGTCTCTCTGTCCAATGTAGTGCCCGTCCGCTCGCCCGCTTGCTC
517 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG--C-C-CGCCCGC---C-C
* * * **
17101797 GTTT-GATCGG-TGGCTTAGGCATACGTAGTTCATTCCTAGTCTAAGATCGGACTGGACCGAGGG
574 GTTTCG-TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG
** * * * * *
17101860 TTGTGGTAGCAGGATCGGTAGCACGCAGTGGGGGACCCGACCGAT-CCCAGCTTGCGCATCTCGC
638 TTACGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGC
* * * * *
17101924 CCTTCTGGCCGATTGAACGCCCGCACGTTCGTTCCGTGGGTTGACTTAGGCATACGGAGTTCATT
703 CCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
* * * *
17101989 CCCAGTCTAAG-AT-C--AG---------A--CT---A--GACC-GA--G-GCTTACGGTAGTAC
768 CCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGACCGGACCGAGGTTGCGGCAGCAC
* * * *
17102030 ATGCTGGGCTCGAGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAG
833 ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * *
17102091 CATCGTCAGAGAACTTGACCGACGGCATTGGGGTTTCGG-GAATCAGGGGGGCC-GGGGGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCG-ATCGGGGGGGCCGGGGGGGTGTG
* * **
17102154 CACACATGATGTGCGATGGGTGCTGGTATTTGGCCCTTATATTTTCCCCCTATCCCTCATCAAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* *
17102219 CTTGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
17102284 AAGTGTCTGAAATGGGCACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * * *
17102349 CTGAATTTTTTATGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTTGGACCAAAACT
260 CTGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* *
17102414 CCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
325 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
*
17102479 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAAGG-TTAAGGGACCATTGTATGAATTTGCAAGC
390 ACGAGTCGTCTTGCCATGAAACTTCACGTG-AAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* *
17102543 CCTAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * * *
17102608 TCCACGGCTTGCGTATCCCGTCTCTCAGGCCGGCGTAATGCCCGCCCGCCCGCTCATTTCGTCGG
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTCGG
* * * *
17102673 TTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACC-GAACCGAGGGTTGCAGTAGC
584 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTACGGCAGC
* * **
17102737 AGGATCGGTAGTACGCAGAGGGGGACCCGACCGATCCCCGGCGAGCGCATCCCGCCCCTCTGGCC
648 AGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * * * *
17102802 CACTGAGCGCCCGCACGCTCCTGTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
713 GACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
17102867 G-AT-TG--G---------AG-C--AGAT----C-GA--G-GGTTACGGTAGCACTTGCTGGGCT
778 GCATACGAAGTTCATTCCCAGTCTAAGATCGACCGGACCGAGGTTGCGGCAGCACATGCTGGGCT
* * *
17102908 CGAGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAG
843 CGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * * * * * *
17102959 CATCGCAGGAAAATCTAACCGACAGCATTGGGGTTCTGACGATCAGGGGGGCC-GGGGGGTGTGT
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
* *
17103023 GCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* *
17103088 TCGAGAACCCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAA
131 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
17103153 AGTGTTTGAAATGGGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
196 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
*
17103218 TGAATTTTTATGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
261 TGAATTTTT-TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * * * * *
17103283 CATTTCCAAAAAAATTTTAAAAAATCTCGAACAGCAAAAGGTTTCGAAAATCATGAAAAATAGAA
325 C-CTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* *
17103348 AATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCTTTGTATGAATTTACAAGC
389 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* * *
17103413 CATAAAAATGGCATTGGCATGCAAAAATAGGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * *
17103478 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCATCGT-GCTCGCTCGCCCATCTGCCCGCTCA
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCC-G-A-CGTAG-T-GCCCG-CC--C-GCCCGCCCG
** * * * *
17103542 TTTCGTCCATTCGCTTAGGCATACGGAATTCATTCCCAGTCTAAGATCATACCGGACCGAGGGTT
575 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT
** * * *
17103607 ACGTTAGCAGGATCGGCAGCATGCAGAGTGGGACCCGGCCGATCCCCGGCTTGCGCATCCC-CCC
640 ACGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
* * * *
17103671 CTCTGGCTGGCTGAGCGCCCACACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCC
705 CTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
17103736 CAGTCTAAG-AT-CG--G---A----C---C---G---GACC-GA--G-GGTTGCGGCAGCACAT
770 CAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGACCGGACCGAGGTTGCGGCAGCACAT
* ** *
17103777 GCTGGGCTCGGACATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCGCTGGAG
835 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * *
17103836 CATCGCCGGAGAACTTAACCGGCGGCATTGGGGTTCCGACAATCGGGGGGGCCGGGGGGGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGGTGTG
* * *
17103901 CGCACATGATGTGCAATGGGTGCCGGTACTTGACCCTTATATTGGCCCCCTATCCCTCATCAAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
*
17103966 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACATGTTTGCTGCCAGTAGCCATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
17104031 AAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
*
17104096 CTGAATTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
260 CTGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * ** *
17104161 CCTTCCAAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTTTAAAATTGTGAAAAATAGAAA
325 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
*
17104226 ACGAGTCGTCTTGCCATGAAACTTCACATGAATGG-TTAAGGGACCATTGTATGAATTTACAAGC
390 ACGAGTCGTCTTGCCATGAAACTTCACGTGAA-GGCTTAAGGGACCATTGTATGAATTTACAAGC
** * * * * * *
17104290 TGTAAAAATGGCATTGGCATGTAAAAAAATGAAGATGTGCCTAAACCCACCTACTACCCCATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * *
17104355 TACACGGCTTGCGCATCCCGTTTCACTGGCCGACCTAGTGCCCGCCCGCCCGCCCGCTCGTTTCG
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG--C-C-CGTTTCG
* * ** *
17104420 TCGGTCGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATTGGACCTGACCGAGGGTT-CTGG
580 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTAC-GG
* * * * *
17104484 CAGTAGGATCGACAGCATGCAAAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCT
644 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* *
17104549 GGCCGGCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
709 GGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* *
17104614 CTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGAACCAGACCGAGGGTTGC-GAAGCACATGC
774 CTAAGCATACGAAGTTCATTCCCAGTCTAAGATCG-ACCGGACCGA-GGTTGCGGCAGCACATGC
* * *
17104678 TGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGAGGCACCATCGCCGAAG
837 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * * *
17104735 CATTGCTGGAGAACCAGACTGACGGCATTGGGGTTCCGACGATCGGGAGGGCCGAGGGGGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGGTGTG
* * *
17104800 CGTACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATTAAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* **
17104865 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATTGGTTTGCTGCCAGTAGCCATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
17104930 AAGTGTCTG-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *
17104994 CTGAATTTTTTGTGCATGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGACCAAAAAT
260 CTGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* *
17105059 CCTTTCGAAAAAATTTTAAAAAATCTCGAACCATAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
325 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
* * * * *
17105124 ATGAGTTGTCTTGCCATGAAACTTCACGTGGAGGCTTAAAGGACCATTGTATGAATTTAAAAGCC
390 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
*
17105189 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGAT
455 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * * *
17105254 CCACGGTTTGCGCATCCCGTCTCTCTCGTCGGCATAGTGCTCGTCCGCCCACCCGCCCGCCCGTT
520 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--C--CCG----CCCGCCCGCCCGTT
* * * * **
17105319 TCGTCAGTTGGCTTAGGCGTACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACTGAGGGTTGT
577 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTAC
* * ** *
17105384 GGCAGCAGGATCGACAGCACGCAGAAGGGGACCCGGTCGATCCCCGGCTTGCGAATCCCGCCCCT
642 GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* * * * *
17105449 CTTGCCGACTAAGAGCCCACACGCTCGTTTCGTGGGTTAACTTAGGCATACGGAGTTCATTCCCC
707 CTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCC
* ** *
17105514 A-TCTAAGCATACGACGTTCATTCCCAGTCTAAGATCAGGTCGGATCGAGGGTTGCGGCAGCACA
771 AGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GACCGGACCGA-GGTTGCGGCAGCACA
* * * * *
17105578 TGCTGGACTCGGGCACGTGCTGGAGCCGTATTTTTCTTCGTC-GGG-A--A-------AC
834 TGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* ****
17105627 CATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGAG-GATCGATTCGGCCGGGGGGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCG-GCGATCGGGGGGGCCGGGGGGGTGTG
* * * *
17105691 CGCACATGATGTGCAATGTGTTCTGGTACTTGGCCCTTGTATTGGCCCCCTATCCCTCATCAAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * * * *
17105756 CTTGAGAACTCATATCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTACCCATTA
130 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
17105821 AAGTATCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
*
17105886 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTA-CAAGTTTGGGGCCAAAAC
260 CTGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * *
17105950 TCCTTCCGAAAAAATTTTCAAAAAACCCCGAACCGT-AAAAGTTTCAAAAATCGTGAAAAATACA
324 TCCTTCCGAAAAAATTTT-AAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGA
* *
17106014 AAACGAGTCGTTTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
388 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
17106079 CCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTATA-CCACGTACCACCCTATCG
453 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * * ** * *
17106143 ATCCACAGCTTGCGTAACCCGTCCCTCTGGCCGGTGTAGTGCCTGCCCACTCGTCCGCTCGCTTG
518 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCC--CGC-C-CGCCCGC-C-C--G
* * * *
17106208 TTTCGTCGGTTGGCTTAGGCATACAGAGTTCGTTCCCAGTC-AAGAT-TGTACCAGATCGAGGGT
575 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCGAGGGT
** * * ** ** *
17106271 TGTGGTAGCAAGATCACCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCTGCC
639 TACGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCC
* * * *
17106336 CCTCTGGCCTG-CTGAGCACCCGCACGCTCGTTTCGAGGATTGACTTATGCATACGGAGTTCATT
704 CCTCTGGCC-GACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
* *
17106400 CCCAGTCTAAG-ATA-G--G---------AG-C---GA---ACC-GA-C--GGTTACGGTAGCAC
768 CCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGACCGGACCGAGGTTGCGGCAGCAC
* *
17106441 ATGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCCCCGGAG
833 ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * *
17106502 CACCGACCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATTGGCGGGGCCGGGGGGGTATG
1 CATCG-CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTG
17106567 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
65 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
**
17106632 CTCGAGAACTCACACCCCCTTAAAGAGAGCATTTGAGATTTTATTGGTTTGCTGCCAGTAGCCAT
130 CTCGAGAACTCACACCCCCTT-AA-AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
17106697 TAAAGTGTCTG-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTT
193 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
*
17106761 AGCTGAATTTTTTGTGCATGCCAACAAAAATACAGGGATCACGTCTA-CAAGTTTGGGGCCAAAA
258 AGCTGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
*
17106825 CTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGA
323 CTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGA
17106890 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
388 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
17106955 CCATAAAAATGGCATTGCCACACAGAAATATGAAGATGTGCCTAAACCCACCTACTACCCTATCG
453 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * * *
17107020 ATCCATGGCTTTCGCAT-CCGTCTCTCTGGCCGGCATAATGCCCGCCCGCCCGCCCGCTTGTTTC
518 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-CC-C--GTTTC
* * *
17107084 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTATGG
579 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGG
** * * * ** * *
17107149 TGGCAGGATCGGTAGCACGTAGAGGGGGACCCGACCGATCCTCGATTTGCGTATCCCGACCCTCT
644 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * *
17107214 GGCC-AGTTGAGTGCCCGCACGTTCGTATT-GTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
709 GGCCGA-CTGAGCGCCCGCACGCTCGT-TTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * ** * * *
17107277 GTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCGGACTAGACCGAGGGTTACAGTAGCACAT
772 GTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GACCGGACCGA-GGTTGCGGCAGCACAT
* * *
17107342 GCTGGGCTCAGGCATGTGCTGGTGCCGCTTTTTTCTTCGCCGGGGCACCATCGCCGGAG
835 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * *
17107401 CATTGCCGAAGAACCTGACCGGCGGCATTGGGTTTCCAGCGATCGGGGGGGGCGGGGCAGGTGTG
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGG-GGGTGTG
* * *
17107466 CGCACATAATGT-CTGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATTCCTCATCAAA
65 CGCACATGATGTGC-GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
17107530 CCTGGACAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
129 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
*
17107595 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTCA
194 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * *
17107660 GCTGAATTTATTTGTGCACGCCAAAAAAAATACAAGGATCACGTCTACCATGTTTGGGACCAAAA
259 GCTGAATTT-TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * *
17107725 CTCCTTCCGAAAAAATTTTAAAAAATC-CTGAACCGCAAAAGGTTTCAAAAATCATGAAAAATAG
323 CTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
* *
17107789 AAAACAAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
387 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* *
17107854 GCCATAAAAATGGCATTGGCACTCAGAAATATGAAGATGTGCGTAAACCCACCTACCACCCTATC
452 GCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
** *
17107919 GATCCACGGCTTGCGCATCCCAACTCTCTGGCCAACGTAGTGCCCGCCCGCCCGCCCGTTTCGTC
517 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTC
* ** * * * *
17107984 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGGTTGGACTAGACCAAGGGTTACAGTAG
582 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAG
* * * ** * *
17108049 CAGGATCGGCAGCACGTAAAGGGGGACCCGATCGATCCCCGATTTACGCATCCTGCCCCTCTGGC
647 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * ** * *
17108114 TGGCTGAGTACCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTA
712 CGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * ** *
17108179 AGCATATGGAGTTCATTCCCAGTCTATGATCGAACCGGACCGAGGGTTGCGGCAGCTTATGCTAG
777 AGCATACGAAGTTCATTCCCAGTCTAAGATCG-ACCGGACCGA-GGTTGCGGCAGCACATGCTGG
* * *
17108244 GCTCGAGCATGTACTGGTGCCGCA--TTT-TTCAT----G----A---CCGGAG
840 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * *
17108284 CATCGCCAGAGAACTTGACCGGCGGCATTGGGGTTCCGACGATCAGGAGGGCC-GGGGGG-GTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
* * * * *
17108347 GCATATGATGCGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCGCTCATCAAACT
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * * ** *
17108412 TCAAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTTCTGGTAGCCACTAA
131 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
17108477 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTATACACTTCGAGTTTTTAGC
196 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
17108542 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
261 TGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * *
17108607 CCTTCCAAAAAAATTTTAAAATATC-CTGAACCGTAAAAAATTTTAAAAATCGTGAAAAATAGAA
325 CCTTCCGAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* *
17108671 AACGAGTTGTCTTGCCACGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
389 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* * **
17108736 CATAAAAATAGCATTGCCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * *
17108801 TCCACGGCTTGCACATCCCGTCTCTCTGGCTGACGTAGTGCCCGCCCGCCCGCTCGTTTCGTTGG
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTCGG
* * * * *
17108866 TTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCGAAGGTTGCAGCAGCA
584 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCA
* * * * *
17108931 AGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGACTTACGCATCTCGCCCCTCTGGCCG
649 GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * * * *
17108996 ACTGAGCACCTGCACGTTCGTTTCGTGGTTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAG
714 ACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* ** * * * * *
17109061 CATACGGAGTTCATTCCCAAACTAAGATCGGACCAGATCGAGGCTTACGGCAACAGATGCTGGGC
779 CATACGAAGTTCATTCCCAGTCTAAGATC-GACCGGACCGAGG-TTGCGGCAGCACATGCTGGGC
** * *
17109126 TTAGGCATGTGCTGGTGCCGCA-TTTTCTTCGTCGGGGCACCATCACCAGAG
842 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * *
17109177 CATCGTCGGAGAACCTGACCGGCGGTATTGGGGTTCCGACGATCGGAGGGGCC-GGGGGG-GTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
* * *
17109240 GCACATGATGCGCGATAGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * * *
17109305 TGGACAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTACCCATTAA
131 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
17109370 AGTGTCTAAAATGGGGACACTTTTTTCAAATGGCCACAAAATCTTGTACACTTCGAGTTTTTAGC
196 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * * *
17109435 TGAATTTTTTTGTGCATGCCAAAAAAAATACAAGCATCACGTCTACCAAGTTTGGGGCAAAAAAT
261 TGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * *
17109500 CTTTCTGAAAAAATTTTAAAAAATCTTGAACCGGAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
325 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
* *
17109565 ACGAGTCATCTGGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
390 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* * *
17109630 ATAAAAATGGCATTGGCATGCAGAATTATGAAGATGTGTCTAAACCCACCTACCACCCTATCGAT
455 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * *
17109695 CCACGGCTTGTGCATCCCGTCTCTTTGGCCGGCGTAAAGCCTGCCCACCCGCCCGCCCGCCCGCT
520 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGT--AG--TG----CCCGCCCGCCCG--C-C-
** * * * *
17109760 CGTTTCGTCGGTTGGCTTAGGCATATAGAGTTCATTCCC-GATCTAAGAACAAACCCGACTGAGG
573 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG-TCTAAGATCAGACCAGACCGAGG
* * * ** * * *
17109824 GCTGCGGCAGCAGGATTGATAGCACGTAGAGGGGGACCCGACCGATCCCTGGCTTGCACATCCCG
637 GTTACGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
* ** * *
17109889 CCCCTCTGGCCGGCTGAGCGCCCGCACAG-TAATTTCATGGGTTGACTTAGGCATACAGAGTTCA
702 CCCCTCTGGCCGACTGAGCGCCCGCAC-GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * * * * *
17109953 TTCTCAATCTAAGCATACGGAGTTCATTTCCAGTCTAAGATCGGATCGGACCGAGGGTTGTGGCA
766 TTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GACCGGACCGA-GGTTGCGGCA
* * *
17110018 GCACATGCTGGGCTCGGGCATGTACTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAG
829 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
** * * * * * *
17110083 CATCATCGGAGAACCTGACCGGTGACATTGGGGTTCCGACGATTGGGGGGGTC-AGGGGGTGTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
* * *
17110147 ACACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATGCCTCATCAAACC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
17110212 TCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACGGGTTTGCTGCCAGTAGCCATTAA
131 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
17110276 ATTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTTAGC
196 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* ** *
17110341 TAAATTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCTACCAAATTTGGGGCCAAAACTC
261 TGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
* * *
17110406 CTTTCAAAAAAATTTTAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATCGAAA
326 CTTCCGAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
* *
17110470 ACGAGTCGTCTTGCTATGAAACTTGACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
390 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* *
17110535 ATAAAAATGGCACTGGCACGCAGAAATATGAATATGTGCCTAAACCCACCTACCACCCTATCGAT
455 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * *
17110600 CCACGGCTTGCGCATCCCGTCTATCTAGCCGGCGTAGTGCCCGCCCGCCTGTCCACCCGCTCGTT
520 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG--C-CC-G----CCCGCCCGTT
* * * * * *
17110665 TCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGAGTTGC
577 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTAC
* * * * * * * * * *
17110730 AGCAACAGGATCGGTAGCACGTAGAGGGGGACCCGGCTGATCCCCGGTTTGCTCATGCCACCCCT
642 GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* * *
17110795 CTGGTCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
707 CTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* ** * * *
17110860 GTCTAAGCATACGAAGTTCATTTCTTGTCTAAGATCAGATCGGACCGAGGGTTACGGCAGCACAA
772 GTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GACCGGACCGA-GGTTGCGGCAGCACAT
* *
17110925 GCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAG
835 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * *
17110984 CATCACCAGAGAACCTGACCGGCGGCATTGGGATTCCGGCGATCGGGGCGGCC-GGGGGGTGTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
17111048 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* *
17111113 TCGAGAACTCACACCACCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAA
131 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
*
17111178 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACGAAATCTTGTACACTTCGAGTTTTTAGC
196 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * * * *
17111243 TGAATTTTGTTGTACATACGAA-AAAAATACAACGATCACGTCTACCAAGTTTTGGGCCAAAA-T
261 TGAATTTT-TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
** * * *
17111306 GCCTTTTGAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAA
325 -CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* * **
17111371 AACGAGTCATCTTGCTATGAAACTTCACGTGAAGGCTTAAGTTACCATTGTATGAATTTACAAGC
389 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
17111436 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
454 CATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * ***
17111501 TCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGTCTGCCCGCTTATTTCGTCGG
519 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTCGG
* *
17111566 TTGGCTTA-GCATACGGAGTTCATTCCCAATCTAAGATCGGACCAG-CCTGAGGGTTACGGCAGC
584 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACC-GAGGGTTACGGCAGC
* * * *
17111629 AGGATCGGCAGCAAGTAGAGGGGGACCC-AGTCGATCCCCGGCTTGCGCATCCCGCCCCACTGGC
648 AGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
** * *
17111693 C-AGCTGAGCGATCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCT
712 CGA-CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
** *
17111757 AAGCATAC-AGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGATGGTTGCGGCAGCACATGTT
776 AAGCATACGA-AGTTCATTCCCAGTCTAAGATC-GACCGGACCGA-GGTTGCGGCAGCACATGCT
** * *
17111821 GGGCTCGACCATGTGCTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCGTCGGAG
838 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
* * * * * *
17111877 CATCGCCAGAGAACCTGATCAGCGGCATTGGGGTTCTGGCGATCAGTGGGGCC-GGGGGGTGTGC
1 CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
17111941 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
66 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * *
17112006 TCGACG-ACTCACATCCCCTTAAAGAACATTTGAGATTTTACAGGTTTGCTGCCAGTAGCTATTA
131 TCGA-GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* * *
17112070 AAGTGTCTAAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTAG
195 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * * *
17112135 CTGAATTTTTTATGCATGCCAACAAAAATACAGGGATCACGTCTACCAAGCTTGGGGCCATAACT
260 CTGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
* * * * **
17112200 CCTTTCGAAAAAATTTTTAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAA
325 CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
17112265 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
390 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* * *
17112330 ACAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC-AACGAT
455 ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * * *
17112394 CCACGGCTTGCACATCCTGTCTCTCTGGCCGGCGTAGTGCCTGCCCGTCCGCCCGCCTGCTCCTT
520 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTA--G--TGCCCGCCCGCCCG-C--C-CGTT
* * *
17112459 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCAAGTCTAAGATCAGACCAGACCGAGGGTT
577 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT
17112522 GCGATAGCAC
Statistics
Matches: 14036, Mismatches: 2049, Indels: 1311
0.81 0.12 0.08
Matches are distributed among these distances:
861 12 0.00
862 5 0.00
863 10 0.00
864 59 0.00
865 7 0.00
866 12 0.00
867 101 0.01
868 529 0.04
869 68 0.00
870 549 0.04
871 591 0.04
872 62 0.00
873 261 0.02
874 348 0.02
875 243 0.02
876 376 0.03
877 674 0.05
878 307 0.02
879 224 0.02
880 718 0.05
881 16 0.00
882 7 0.00
883 51 0.00
885 2 0.00
886 8 0.00
887 14 0.00
888 8 0.00
889 13 0.00
890 145 0.01
891 226 0.02
892 317 0.02
893 1423 0.10
894 135 0.01
895 180 0.01
896 213 0.02
897 1053 0.08
898 722 0.05
899 448 0.03
900 246 0.02
901 650 0.05
902 1114 0.08
903 85 0.01
904 9 0.00
905 516 0.04
906 207 0.01
907 84 0.01
908 15 0.00
909 4 0.00
910 13 0.00
911 7 0.00
912 15 0.00
913 23 0.00
914 5 0.00
915 11 0.00
916 1 0.00
917 16 0.00
918 14 0.00
919 13 0.00
920 2 0.00
921 10 0.00
922 16 0.00
923 18 0.00
924 12 0.00
925 7 0.00
926 2 0.00
927 11 0.00
928 27 0.00
929 11 0.00
930 46 0.00
931 15 0.00
932 12 0.00
933 23 0.00
934 18 0.00
935 8 0.00
936 14 0.00
937 12 0.00
938 16 0.00
939 19 0.00
940 29 0.00
941 16 0.00
942 16 0.00
943 14 0.00
944 35 0.00
945 17 0.00
946 9 0.00
947 2 0.00
948 7 0.00
949 15 0.00
950 5 0.00
951 10 0.00
952 8 0.00
953 16 0.00
954 9 0.00
955 5 0.00
956 2 0.00
957 4 0.00
958 4 0.00
960 4 0.00
961 3 0.00
962 5 0.00
963 10 0.00
964 4 0.00
965 3 0.00
966 19 0.00
967 11 0.00
968 10 0.00
969 12 0.00
970 25 0.00
971 15 0.00
972 33 0.00
973 8 0.00
974 13 0.00
975 12 0.00
976 19 0.00
977 12 0.00
978 17 0.00
979 11 0.00
980 19 0.00
981 1 0.00
982 7 0.00
983 5 0.00
984 21 0.00
985 14 0.00
986 4 0.00
987 11 0.00
988 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (893 bp):
CATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGC
GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
TGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
CTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
TAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
CACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGTTTCGTCGGTT
GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCAGG
ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGAC
TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
TACGAAGTTCATTCCCAGTCTAAGATCGACCGGACCGAGGTTGCGGCAGCACATGCTGGGCTCGG
GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAG
Found at i:17100235 original size:26 final size:26
Alignment explanation
Indices: 17100199--17100251 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17100189 GTTGACTTAG
17100199 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17100225 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17100251 G
1 G
17100252 ATCGAACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17104629 original size:26 final size:26
Alignment explanation
Indices: 17104592--17104644 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17104582 GTTGACTTAG
*
17104592 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17104618 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17104644 G
1 G
17104645 ATCGAACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17105532 original size:26 final size:26
Alignment explanation
Indices: 17105494--17105546 Score: 74
Period size: 26 Copynumber: 2.0 Consensus size: 26
17105484 GTTAACTTAG
17105494 GCATACGGAGTTCATTCCCCA-TCTAA
1 GCATACGGAGTTCATT-CCCAGTCTAA
17105520 GCATAC-GACGTTCATTCCCAGTCTAA
1 GCATACGGA-GTTCATTCCCAGTCTAA
17105546 G
1 G
17105547 ATCAGGTCGG
Statistics
Matches: 25, Mismatches: 0, Indels: 4
0.86 0.00 0.14
Matches are distributed among these distances:
25 6 0.24
26 19 0.76
ACGTcount: A:0.26, C:0.30, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17107293 original size:26 final size:26
Alignment explanation
Indices: 17107257--17107309 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17107247 GTTGACTTAG
17107257 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17107283 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17107309 G
1 G
17107310 ATCGGACTAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17108190 original size:26 final size:26
Alignment explanation
Indices: 17108154--17108204 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
17108144 GTTGACTTAG
17108154 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
17108180 GCATATGGAGTTCATTCCCAGTCTA
1 GCATACGGAGTTCATTCCCAATCTA
17108205 TGATCGAACC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.25, G:0.18, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17108672 original size:27 final size:27
Alignment explanation
Indices: 17108614--17108672 Score: 66
Period size: 27 Copynumber: 2.2 Consensus size: 27
17108604 ACTCCTTCCA
***
17108614 AAAAAATTTTAAAATATCCTGAACCGT
1 AAAAAATTTTAAAATATCCTGAAAAAT
*
17108641 AAAAAATTTTAAAA-ATCGTGAAAAAT
1 AAAAAATTTTAAAATATCCTGAAAAAT
*
17108667 AGAAAA
1 AAAAAA
17108673 CGAGTTGTCT
Statistics
Matches: 27, Mismatches: 5, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
26 13 0.48
27 14 0.52
ACGTcount: A:0.58, C:0.08, G:0.08, T:0.25
Consensus pattern (27 bp):
AAAAAATTTTAAAATATCCTGAAAAAT
Found at i:17109085 original size:26 final size:26
Alignment explanation
Indices: 17109034--17109086 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17109024 TTTGACTTAG
**
17109034 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAAACTAA
*
17109060 GCATACGGAGTTCATTCCCAAACTAA
1 GCATACAGAGTTCATTCCCAAACTAA
17109086 G
1 G
17109087 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.26, G:0.17, T:0.25
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAAACTAA
Found at i:17111763 original size:26 final size:26
Alignment explanation
Indices: 17111733--17111785 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
17111723 GTTGACTTAG
17111733 GCATAC-GAAGTTCATTCCCAGTCTAA
1 GCATACAG-AGTTCATTCCCAGTCTAA
17111759 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17111785 G
1 G
17111786 ATCAGACCAA
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17113445 original size:179 final size:182
Alignment explanation
Indices: 17113246--17113575 Score: 461
Period size: 180 Copynumber: 1.8 Consensus size: 182
17113236 AACAGGATCA
* * * * * * * *
17113246 GTAGCACGTAGAGGGGGACCCAGCCGATCCCCGGCTTGTGCATCTCG-CCCTTTGGTCGGCTGAG
1 GTAGCACGCAGAGGGGGACCCAGCCAATCCCCGGCCTGCGCATCCCGCCCCTCTGGCCGACTGAG
*
17113310 CGCCCGCACGTTCGTTTCGTGGGTTGACTTAAGCATAC-GA-AGTCCCAGTAC-AAGCATACAGA
66 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAAGCATACGGACAGTCCCAGT-CTAAGCATACAGA
17113372 GTTCATTCCCAGTCTAAGATCGAGCCAGACCGAGGGTTGCGTCAGCAGGATTG
130 GTTCATTCCCAGTCTAAGATCGAGCCAGACCGAGGGTTGCGTCAGCAGGATTG
* * **
17113425 GTAGCACGCAGAGGGGGACCCGGTCAATCCTTGGCCTGCGCATCCCGCCCCTCTGGCCGACTGAG
1 GTAGCACGCAGAGGGGGACCCAGCCAATCCCCGGCCTGCGCATCCCGCCCCTCTGGCCGACTGAG
* * *
17113490 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTCATTCCCAGTCTAAGCATACGG
66 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAAGCATACGGA--CAGTCCCAGTCTAAGCATACAG
17113555 AGTTCATTCCCAGTCTAAGAT
129 AGTTCATTCCCAGTCTAAGAT
17113576 TGAACTGGAC
Statistics
Matches: 129, Mismatches: 16, Indels: 7
0.85 0.11 0.05
Matches are distributed among these distances:
179 38 0.29
180 50 0.39
181 2 0.02
183 1 0.01
184 38 0.29
ACGTcount: A:0.20, C:0.30, G:0.29, T:0.22
Consensus pattern (182 bp):
GTAGCACGCAGAGGGGGACCCAGCCAATCCCCGGCCTGCGCATCCCGCCCCTCTGGCCGACTGAG
CGCCCGCACGCTCGTTTCGTGGGTTGACTTAAGCATACGGACAGTCCCAGTCTAAGCATACAGAG
TTCATTCCCAGTCTAAGATCGAGCCAGACCGAGGGTTGCGTCAGCAGGATTG
Found at i:17113556 original size:25 final size:26
Alignment explanation
Indices: 17113522--17113573 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17113512 GTTGACTTAG
17113522 GCATACGGAG-TCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17113547 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17113573 G
1 G
17113574 ATTGAACTGG
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 10 0.38
26 16 0.62
ACGTcount: A:0.27, C:0.27, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17114645 original size:706 final size:694
Alignment explanation
Indices: 17113547--17114888 Score: 2064
Period size: 706 Copynumber: 1.9 Consensus size: 694
17113537 CCCAGTCTAA
* * *
17113547 GCATACGGAGTTCATTCCCAGTCTAAGATTGAACTGGACCGGGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGAACTGGACCGAGGGTTACGACAGCACATGCTCGG
* * *
17113612 CTCGGGCATGTGATGGTGCCGCATTTCTCTTCGCGGGTGCACCATCGTCGGAAAACCTGACCGGC
66 CTCGGGCATGTGATGGTGCCGCATTTCTCTTCGCGAGTGAACCATCGTCGGAAAACCTGACCGAC
* * * **
17113677 GGCGTTAGTGTTCCGGCGATCGGGCGGGCCGGGGGGGTGTGCGCACATGATGTGTGATGGTGCTG
131 GGCATTAGGGTTCCGGCGATCGGGCGGGCCGGAGGGGTGTGCGCACATGATGTGCAATGGTGCTG
*
17113742 GTACTTGGCCCTTATATTAGCCGCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
196 GTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
17113807 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
261 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * * *
17113872 TTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTATAGCTGAATTTTTTTATGCATGCCAAAA
326 TTCAAATGGTAACAAAACCTTGTACACTTCGAGTTTATAGCTGAATTTTTTTATGCAAGCCAAAA
* *
17113937 AAAATACAAGGATCACGTCTACCTAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
391 AAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * *
17114002 CTCAAACTGTAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
456 CCCAAACCGTAAAAAGTTTCAAAAATCATAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* **
17114067 CACGTGAAGGCTTAAGGGACCACTGTATGAATTTGCAAGCCATAAAAATGGCATTGGCATGTAAA
521 CACGTGAAGGCTTAAGGG-CCACTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAAA
17114132 AATATGAAGATGTGCCAAAACCCACCTACCACCCTATCGAACCACGGCTTGCACATACTGTCTCT
585 AATATGAAGATGTGCCAAAACCCACCTACCACCCTATCGAACCACGGCTTGCACATACTGTCTCT
17114197 TTGGCCGACGTAGAGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
650 TTGGCCGACGTAGAGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * *
17114242 GCATACGGAGTTCATTTCCAGTCTAAGATCGAA-TCGGACCGAGGGTTGCGATAGCACATGCTCG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGAACT-GGACCGAGGGTTACGACAGCACATGCTCG
* * *
17114306 GCTCGGGCATGTGTTGGTGCCGTATTTTTCTTCGTCGAG-GAACCATCGTCGGAGCATCGCCGGG
65 GCTCGGGCATGTGATGGTGCCGCATTTCTCTTCG-CGAGTGAACCATCGTCGGA--A--------
* * *
17114370 GAACCTGACCGACGGCATTGGGGTTCCGGTGATCGTGG-GGGCC-GAGGGGTGTGTGCACATGAT
119 -AACCTGACCGACGGCATTAGGGTTCCGGCGATCG-GGCGGGCCGGAGGGGTGTGCGCACATGAT
* *
17114433 GTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
182 GTGCAAT-GGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCGAGAACT
17114498 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG-CAGTAGCCATTAAAGTGTCTGA
246 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
*
17114562 AATGGGGACACTTTTTTCAAATGGTAACAAAACCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
311 AATGGGGACACTTTTTTCAAATGGTAACAAAACCTTGTACACTTCGAGTTTATAGCTGAATTTTT
* * *
17114627 TTGTGCAAGCTGAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTTCGA
376 TTATGCAAGC-CAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * *
17114692 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATTATGAAAAATAGACAACGAGTCG
440 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATAAAAAATAGAAAACGAGTCG
* *
17114757 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGCCATTGTATGAATTTACAGGCCATAAAAATG
505 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGCCACTGTATGAATTTACAAGCCATAAAAATG
* * *
17114822 GCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
570 GCATTGGCACATAAAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATCGAACCACGGCTT
17114887 GC
635 GC
17114889 GCATCTCATC
Statistics
Matches: 583, Mismatches: 48, Indels: 22
0.89 0.07 0.03
Matches are distributed among these distances:
694 1 0.00
695 100 0.17
696 3 0.01
697 1 0.00
705 204 0.35
706 272 0.47
707 2 0.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (694 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGAACTGGACCGAGGGTTACGACAGCACATGCTCGG
CTCGGGCATGTGATGGTGCCGCATTTCTCTTCGCGAGTGAACCATCGTCGGAAAACCTGACCGAC
GGCATTAGGGTTCCGGCGATCGGGCGGGCCGGAGGGGTGTGCGCACATGATGTGCAATGGTGCTG
GTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
TTCAAATGGTAACAAAACCTTGTACACTTCGAGTTTATAGCTGAATTTTTTTATGCAAGCCAAAA
AAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
CCCAAACCGTAAAAAGTTTCAAAAATCATAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
CACGTGAAGGCTTAAGGGCCACTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAAAA
ATATGAAGATGTGCCAAAACCCACCTACCACCCTATCGAACCACGGCTTGCACATACTGTCTCTT
TGGCCGACGTAGAGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
Found at i:17115146 original size:26 final size:26
Alignment explanation
Indices: 17115117--17115169 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17115107 GTTGACTTAG
*
17115117 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17115143 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17115169 G
1 G
17115170 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17117183 original size:26 final size:26
Alignment explanation
Indices: 17117146--17117196 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
17117136 GTTGACTTAG
17117146 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17117172 GCATAC-GAAGTTCATTCCCAGTCTA
1 GCATACAG-AGTTCATTCCCAGTCTA
17117197 TGATCGGACG
Statistics
Matches: 24, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.29, C:0.27, G:0.16, T:0.27
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17118076 original size:26 final size:26
Alignment explanation
Indices: 17118046--17118098 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17118036 GTTGACTTAG
* *
17118046 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
17118072 GCATACAGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
17118098 G
1 G
17118099 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:17118405 original size:878 final size:867
Alignment explanation
Indices: 17116396--17119382 Score: 3836
Period size: 878 Copynumber: 3.4 Consensus size: 867
17116386 GAGCGTCGCT
* * ** * * *
17116396 GGAGAACCTGATCGACGACATTGGGGTTCCGACGATTGGGGGGGCCGGGGGGTGTGCGCCCATGA
1 GGAGAACCTGATCG-CGGCATTGGGGTTCTGGTGATAGAGGGGGCCGGGGGGTGTGCGCACATGA
* * * * *
17116461 TCTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCAAGAAC
65 TGTGCGATGGTTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCGAGAAC
* *
17116526 TCACACCCCCTTAAAGAGCATTTGAAATTTTACAGGTTTGCTCCCAGTAGCCATTAAAGTGTCTG
130 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
17116591 AAATGGGGAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGTT
195 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTT
* * * *
17116656 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCATTCCAA
260 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGG-CAAAAATCCTTCCCA
* * *
17116721 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCG
324 AAAAATTTT-AAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCG
* * *
17116786 TCTTGCCATGAAACTTCACGTGAAGGCTTTAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
388 TCTTGCCATGAAAATTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* ** * * *
17116851 GGCATTGGCACGCAGAAATATTAAGATGTGCCTAAACCCACCTACCA-CCTATCGATCCACGACT
453 GGCATTGGAACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACGGCT
* * * * * * * *
17116915 T-CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGTCCGCCCGCCCGCTCGTTTCGTCAGT
518 TGCGCATTCTGCCTCTCTGGCCGACATAGT----G--C--CCGCCCACCCACTCGTTTCATCGGT
* * * * * * * * ** *
17116979 TGGCTTAGGCATGCGAAGTTCATTCCTAGTCCA-AGATCGGACCGGATTGAGGGTTGCAATAGCA
575 TCGCTTAGGCATACGGAGTTCATTCCCAGT-CATAGATTGGACCGGATCGAAGGTTACAGCAACA
* * * * * * * * * * *
17117043 GGATCGG-TAGCACGTAGAGGGGGACCCGATCGATCCTCGGCTTGTGCATCCCGTCGCTCTAGCC
639 GGATCGGCGA-CACGCAGAGGGCGACCCGACCAATCCCCGGCTTGCGCATCCCGCCCCTTTGGCC
* ** * *
17117107 GGCTAAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
703 GGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
17117172 GCATACGAAGTTCATTCCCAGTCTATGATCGGA-CGGACCGAGGGTT-ACG-ATAGCACATGCTG
768 ACATACAAAATTCATTCCCAATCTAAGATCGGACCGGACCGAGGGTTGAGGCA-A-CACATGCTG
* *
17117234 GG-TC-GGCCATGTGCTGGTGCCGCAATTTTCTTCATCGGGGCACCATCGCCGAAGCATCGTC
831 GGCTCAGG-CATGTGCTGCTGCCAC-A--TT-TT--T--------C-T----------TCGTC
* * *
17117295 GGAGAACCTGACTGGCGGCATTGGGGTTCTAGTGATCG-GGGGAGCCGGGGGGTGTGCGCACATG
1 GGAGAACCTGA-TCGCGGCATTGGGGTTCTGGTGATAGAGGGG-GCCGGGGGGTGTGCGCACATG
* * *
17117359 ATGTGCGATGGGTGCTGGTACCTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCGAGAA
64 ATGTGCGATGGTTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCGAGAA
* *
17117424 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAACTGTCT
129 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* *
17117489 GAAATGGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGT
194 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTT
17117554 TTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGTG-AAAAATCCTTCCC
259 TTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGG-GCAAAAATCCTTCCC
* *
17117618 AAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATATAAAACGAGTC
323 AAAAAATTTT-AAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTC
* * **
17117683 GTCTTGCCATGAAAATTCATGTGAAGGCTTATTGGACCATTGTATGAATTTACAAGCCATAAAAA
387 GTCTTGCCATGAAAATTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
17117748 TGGCATT-G-ACATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACG
452 TGGCATTGGAACAT--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACG
* *
17117811 GCTTGCGCA-TCTCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCACTCGTTTCAT
515 GCTTGCGCATTCT-GCCTCTCTGGCCGACATAGT--------GCCCGCCCACCCACTCGTTTCAT
* *
17117875 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCATAGATTGGACCGGATC-AAGGGTTGCAGC
571 CGGTTCGCTTAGGCATACGGAGTTCATTCCCAGTCATAGATTGGACCGGATCGAA-GGTTACAGC
* * * * *
17117939 AACAGGATCGGTGGCACGCAGAGGGCGACCCGACCAATCCCCGGCTTGTGCATCCCGTCCGTTTG
635 AACAGGATCGGCGACACGCAGAGGGCGACCCGACCAATCCCCGGCTTGCGCATCCCGCCCCTTTG
17118004 GCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
700 GCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * *
17118069 TAAGCATACAGAGTTCATTCCCAATCTAAGATCGGACCGGACCGAGGGTTGTGGCAACACATGTT
765 TAAACATACAAAATTCATTCCCAATCTAAGATCGGACCGGACCGAGGGTTGAGGCAACACATGCT
* *
17118134 GGGCTCGGGCATGTGCTGCTGCCGCATTTTTCTTCGTC
830 GGGCTCAGGCATGTGCTGCTGCCACATTTTTCTTCGTC
* *
17118172 GGAGAACCTGATCGACGGCATTGGGGTTCCGGTGATAGAGGGGGCCGGGGGGGTGCGCGCACATG
1 GGAGAACCTGATCG-CGGCATTGGGGTTCTGGTGATAGAGGGGGCC-GGGGGGTGTGCGCACATG
*
17118237 ATGTGCAATGGTTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCGAGAA
64 ATGTGCGATGGTTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCGAGAA
*
17118302 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTGT
129 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
17118367 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTT
194 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTT
* * ** *
17118432 TTTTGTGCATGCCAAC-AAAATAACAAAGATCACGTCTAATAAGTTTGGGGCTAAAA-CGCATTC
259 TTTTGTGCATGCCAACAAAAAT-ACAAGGATCATGTCTACCAAGTTTGGGGCAAAAATC-C-TTC
* * *
17118495 CAAAAAAATTTTAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATGGAAAACGAGT
321 CCAAAAAATTTTAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGT
* * * *
17118560 CGTCTTGCCATGAAACTTCGCGTGAACTCTTAAGGGACCATTGTCTGAATTTACAAGCCATAAAA
386 CGTCTTGCCATGAAAATTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
*
17118625 ATGGCATTGGAACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
451 ATGGCATTGGAACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACGG
17118690 CTTGCGCATTCTGCCTCTCTGGCCGACATAGTGCCCGCCCACCCACTCGTTTCATCGGTTCGCTT
516 CTTGCGCATTCTGCCTCTCTGGCCGACATAGTGCCCGCCCACCCACTCGTTTCATCGGTTCGCTT
* *
17118755 AGGCATACGGAGTTCATTCCCAGTCTTAGATTGGACCGGATCGAAGGTTACGGCAACAGGATCGG
581 AGGCATACGGAGTTCATTCCCAGTCATAGATTGGACCGGATCGAAGGTTACAGCAACAGGATCGG
* * *
17118820 CGACACGCAGAGGGGGACCCGGCCAATCCCCGGCTTGCGCATCCCGCCCCTTTGGTCGGCTGAGC
646 CGACACGCAGAGGGCGACCCGACCAATCCCCGGCTTGCGCATCCCGCCCCTTTGGCCGGCTGAGC
* * *
17118885 GCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAACATACAA
711 GCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAACATACAA
*
17118950 AATTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGAGGCAACACATGCTGGGCTCAGGCA
776 AATTCATTCCCAATCTAAGATCGGACCGGACCGAGGGTTGAGGCAACACATGCTGGGCTCAGGCA
17119015 TGTGCTGCTGCCACATTTTTCTTCGTC
841 TGTGCTGCTGCCACATTTTTCTTCGTC
** * *
17119042 GGAGAACCT-ATC-CGGTGCATTGGGGTTCTGACGATAGAGAGGGCCGGGGGGTGTGTGCACATG
1 GGAGAACCTGATCGC-G-GCATTGGGGTTCTGGTGATAGAGGGGGCCGGGGGGTGTGCGCACATG
* * * *
17119105 ATGTGCGATGGTTGCCGGCACTTGGCCTTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAA
64 ATGTGCGATGGTTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCGAGAA
* *
17119170 CTCACACCCCCTTAAAGAGCATTTGAGATTTAATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
129 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * * * * * * *
17119235 AAAATGGGGACACTTTTTTCAAAAGGTCAAAAAATATTATACACTTCGAGTTTTTAACGGAATTT
194 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTT
* * * *
17119300 TTTTATGCATGCCAACAAAACTACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTT-TC
259 TTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGG-CAAAAATCCTTCCC
17119364 AAAAAATTTTTGAAAAATC
323 AAAAAA-TTTT-AAAAATC
17119383 TCGAACCACA
Statistics
Matches: 1886, Mismatches: 164, Indels: 106
0.87 0.08 0.05
Matches are distributed among these distances:
867 7 0.00
868 241 0.13
869 44 0.02
870 303 0.16
871 2 0.00
876 2 0.00
877 46 0.02
878 441 0.23
879 18 0.01
880 4 0.00
887 1 0.00
888 1 0.00
896 3 0.00
897 1 0.00
898 178 0.09
899 303 0.16
900 239 0.13
901 24 0.01
902 20 0.01
903 3 0.00
904 5 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (867 bp):
GGAGAACCTGATCGCGGCATTGGGGTTCTGGTGATAGAGGGGGCCGGGGGGTGTGCGCACATGAT
GTGCGATGGTTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTCGAGAACT
CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTT
TTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAAATCCTTCCCAAA
AAATTTTAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCT
TGCCATGAAAATTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
ATTGGAACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACGGCTTGC
GCATTCTGCCTCTCTGGCCGACATAGTGCCCGCCCACCCACTCGTTTCATCGGTTCGCTTAGGCA
TACGGAGTTCATTCCCAGTCATAGATTGGACCGGATCGAAGGTTACAGCAACAGGATCGGCGACA
CGCAGAGGGCGACCCGACCAATCCCCGGCTTGCGCATCCCGCCCCTTTGGCCGGCTGAGCGCCCG
CACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAACATACAAAATTC
ATTCCCAATCTAAGATCGGACCGGACCGAGGGTTGAGGCAACACATGCTGGGCTCAGGCATGTGC
TGCTGCCACATTTTTCTTCGTC
Found at i:17120218 original size:26 final size:26
Alignment explanation
Indices: 17120181--17120233 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17120171 GTTGACTTAG
*
17120181 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
17120207 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17120233 G
1 G
17120234 ATCGGATCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17121118 original size:26 final size:26
Alignment explanation
Indices: 17121082--17121134 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17121072 GTTGACTTAG
*
17121082 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
* *
17121108 GCATACGGAGTTCATTCCAAGTTTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
17121134 G
1 G
17121135 ATCAGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCAAGTCTAA
Found at i:17122037 original size:26 final size:26
Alignment explanation
Indices: 17121989--17122038 Score: 75
Period size: 26 Copynumber: 1.9 Consensus size: 26
17121979 AACTTAGGCG
*
17121989 TATGGAGTTCATTCCCTATCTAAGCA
1 TATGGAGTTCATTCCCTACCTAAGCA
17122015 TATGGAGTTCATTCCC-AGCCTAAG
1 TATGGAGTTCATTCCCTA-CCTAAG
17122039 ATCGAAACAG
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
25 1 0.05
26 21 0.95
ACGTcount: A:0.26, C:0.24, G:0.18, T:0.32
Consensus pattern (26 bp):
TATGGAGTTCATTCCCTACCTAAGCA
Found at i:17122902 original size:26 final size:26
Alignment explanation
Indices: 17122862--17122919 Score: 80
Period size: 26 Copynumber: 2.2 Consensus size: 26
17122852 CGTGAGTTGA
* *
17122862 CTAAGGCATATGGAGTTAATTCCTAGT
1 CTAA-GCATACGGAGTTAATTCCCAGT
*
17122889 CTAAGCATACGGAGTTCATTCCCAGT
1 CTAAGCATACGGAGTTAATTCCCAGT
17122915 CTAAG
1 CTAAG
17122920 ATCGGACCAG
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
26 24 0.86
27 4 0.14
ACGTcount: A:0.29, C:0.21, G:0.21, T:0.29
Consensus pattern (26 bp):
CTAAGCATACGGAGTTAATTCCCAGT
Found at i:17123003 original size:881 final size:884
Alignment explanation
Indices: 17119497--17128538 Score: 8842
Period size: 881 Copynumber: 10.3 Consensus size: 884
17119487 GTGCACACGT
* *
17119497 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCGTATCCTTCATCAAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
*
17119562 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTT
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* *
17119627 TGAAATGGGGACAC-TTTTTC-------CATAAAATCTTGTACACTTTGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-T
* * * * * ** *
17119684 TTTTTATGGATGCCAAC-AAAATACAAGCATCTCGTGTACCAAGTTTGTTGCCAAAACTCCTTCC
195 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT
* * *
17119748 AAAAAAATTTTAAAAAATCCCGAACGGTAAAAAGTTTGAAAAATCATGAAAAATAGAAAACGAGT
260 GAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
* *
17119813 CGTCTTGCCATGAAACTTCACATAAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
325 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * *
17119878 ATGGCATTGGCACA-CATAAATATTAAGATGTGCCTAAGCCCACCTACCACCCTATCGATCCACG
390 ATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * * * * * *
17119942 GCTTGTGTATCCCGTCTCTCTGGTCGACATAATGCCCGCCCGCTCGCCCGACCGCCCGCTAGTTT
455 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CCCGC-C-CAC--CCGCCCGCTCGTTT
* *
17120007 CGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAATCTAAGATCAGACC-AGATCGAGGGTTGC
513 CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ATCGAGGGTTGC
* * * * * * * *
17120071 GTCAGCAAGATCGGCAACACACAGAGGGGGACCCAACCGATCCTCGGCTTGTGCATCCTGCCCCT
577 GT-AGCAGGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCT
* * * *
17120136 CTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCA
641 CTGGCCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTA
* * * * * *
17120201 GTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGATC-GACTGAGTGTTGTAGCAGCACAT
706 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCACAT
* * * * *
17120265 GCTGGGCTCGGGCAGGTGTTGGTGCTGCATTTTTCTTCGTCGGGGCACTATCGCCGGAGCATCAC
771 GCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCAC
* * * *
17120330 CGGAGAACCTGACCGGTGACATTGGGGTTTCGGCGATCGGGGGGGCCGGGGCGGTGTGCGCATA
836 CGGAGAACCTGACCGGTGGCATTGGGG-TT---C---C---GGTG--AGTGCGGTGTGCG---A
* * * *
17120394 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTGTCCCTCACCAAACCTTGGG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* * * *
17120459 AACTCACAGCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGCAGCCACTAAAGTGT
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
*
17120524 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTACGAGTTTTTAGCTGAAT
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * *
17120589 TGTTTTGTTCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCTTTC
195 T-TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * *
17120654 CGAAAAAATTTTAAAAAAT--CGTACCGTAAAAAGTTTCAAAAATAATGAAAAATAGAAAACGAG
259 TGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
17120717 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
324 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *
17120782 AATGGCATGGGCGCA-CAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATCGATCCAC
389 AATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * ** *
17120846 GGCTTACGCATCCCGTCTCTCTGGCCGACATAGTGCTCGCCCGCCCGTCCGCCCGTTCGTTTCGT
454 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CCCGCCCACCCGCCCGCTCGTTTCGT
* * * * * *
17120911 CGGTTGGCTTAGGCATACAGAGTTCTTTCCCAGTCTAAGATCAGATCGGATCGAGGGTTGTGACA
516 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTGCG-TA
* * * * * * ** *
17120976 GCAAGATCGGCAGCACGTAGACGGGGACCCGGTCGATCCTCAACTTGTGCATCCTGCCCCTCTGG
580 GCAGGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGG
* * * * ** * *
17121041 CCGGTTGAGCACCCGTACGCTCGTTAAGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCT
645 CCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCT
* * * *
17121106 AAGCATACGGAGTTCATTCCAAGTTTAAGATCAGACCGGACCGAGGGTTGCAGCAGCACATGCTG
710 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCACATGCTG
* * * * * *
17121171 GGCTGGGGCATGTGCTGGTGCCGTATTTTTCTTC-ACTGAGGCACC-TTGCCGAAGCATCGCCGG
775 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTC-GGGGCACCATCGCCGGAGCATCACCGG
* * * * * * * *
17121234 AGAACTTGACCGGCGACGTTGTGGTTCTAGCGATCGGGGGGGCCGGAGGGGGTGTGCGCACA
839 AGAACCTGACCGGTGGCATTGGGGTTC---CG---GTGAGTG-C------GGTGTGCG---A
* *
17121296 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCCCAAG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* * *
17121361 AACTCACACCCTCTTAAAGAGCATTTGAGATTTTACATGTTTGCTGCCAGTAGCCATCAAAGTGT
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* *
17121426 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACCTCGAGTTTTTAGTTGAAT
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* *
17121491 GTTTTTGTACATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTACTTC
195 -TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
** * *
17121556 TGAAAAAATTTTAAAAAATGTCGAACGGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
259 TGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
17121621 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
324 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *
17121686 AATGGCATTGGAAC-CCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCAT
389 AATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * * *
17121750 GGCTTACGCATCCCTTCTCTCTGGCCGACGTAGTGCACGCCCGCCTACCCGCCCACTCCTTTCGT
454 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CCCGCCCACCCGCCCGCTCGTTTCGT
* * *
17121815 CAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCGACA
516 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTGCG-TA
* * * * * *
17121880 GCAGGATTGGCAGCATGCAAAGGGGGACCCGATCGATCCCCGGCTTGTGCATGCC-GCCCCTTTG
580 GCAGGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCAT-CCTGCCCCTCTG
* * * * * *
17121944 GCCAGCTGAGCACCCGCACGCTCGTTTCGTGGGTTAACTTAGGCGTATGGAGTTCATTCCCTA-T
644 GCCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCTAGT
* * * * * *
17122008 CTAAGCATATGGAGTTCATTCCCAGCCTAAGATCGAAACAGACCGAGGTTTGCAACAGCACATGC
708 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCACATGC
* ** * * *
17122073 TAGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCACCGGGACACCATCACCGGAGCATCACTG
773 TGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCG
*
17122138 GAGAACCTGACCGGTAGCATTGGGGTTCCGGTGA-T-CGG-G-G-G-
838 GAGAACCTGACCGGTGGCATTGGGGTTCCGGTGAGTGCGGTGTGCGA
* *
17122179 G-TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAAACGTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* *
17122243 ATTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* * * *
17122308 TGAAATGGGGACACTTTTTTTAAATTGTTATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATA
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-
* * * *
17122373 TTTTTATACATGCCAACAAAAATACAAGGATCACGTCTACCAA-TATTCGGACCAAAACTCCTTC
195 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT-TTGGGGCCAAAACTCCTTC
* * * *
17122437 TGAAAAAATTTTAAAAAGTCTCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
259 TGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
*
17122502 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAA
324 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
*
17122567 AATGGCATTGGCACACCA-AAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCAC
389 AATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * **
17122631 GGCTTGCGCATCCCGTCTCTCTGGTCGGTGTAGTGCACACCCGCCCACCCGCCCGCTCATTTTAT
454 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CCCGCCCACCCGCCCGCTCGTTTCGT
* *
17122696 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGAGTTACAGTA
516 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTGC-GTA
* * * * * **
17122761 GCAAGATCGACAGTACGTAGATGAGGATTCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGG
580 GCAGGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGG
* * * *
17122826 CCGGCTGAGCGCCCGCACACTCGTTTCGTGAGTTGACTAAGGCATATGGAGTTAATTCCTAGTCT
645 CCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCT
* *
17122891 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGGTTGCGGCAGCACATGCTG
710 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCACATGCTG
**
17122956 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCAT---C---G--T---CGGA
775 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGA
* * * *
17123010 GAACCTGATCGGCGGCATTGGGGTTCTGGTGATCGGGGGGTCGGGGGGTGTGCGCACA
840 GAACCTGACCGGTGGCATTGGGGTTCCGGTGA-------GT---GCGGTGTGCG---A
*
17123068 TGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
*
17123133 AACTCACACCCCCTTAAAGTGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* * * *
17123198 CCGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGACTTTTTAGCTGAAT
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * * *
17123263 TGTTTTGTGCAGGCCAACAAATATACAAGGATCACATCTAGCAAGTTTGGGGCCAAAACTCCTT-
195 T-TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* ** * *
17123327 TCGAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACAA
259 T-GAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
*
17123392 GTCGTCTTGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
323 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* ** * * *
17123457 AAATGGCAATGGCA-TGCAAAAATATGAAGATGTGACTAAACCCACCTACCACCCTATTGATCCA
388 AAATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * *
17123521 CGGCTTACGCATCCCGTCTCTCTGGCCGACGTAGT-----GCCCA----CCCGCTCGTTTCATCG
453 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCGCCCACCCGCCCGCTCGTTTCGTCG
* * * *
17123577 ATTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGAATTGAGGGTTGCAGTAGT
518 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTGC-GTAGC
* * *
17123642 AGGATCGACAGCACGCAGAAGGGGACCCGA-CTGATCCCCGGCTTGCGCAT-CTCGCCCATATGG
582 AGGATCGACAGCACGCAGAGGGGGACCCGATC-GATCCCCGGCTTGCGCATCCT-GCCCCTCTGG
* * * * *
17123705 CCGGTTAAGCACCCGCACATTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATT-CTCAGTC
645 CCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCT-AGTC
* * ** * * *
17123769 TAAGCATATGGAGTTCATTCCCAATCTAAGATCCAACCAGACTGAGGGTTGCGGCAACACATGCT
709 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCACATGCT
** * * * ** *
17123834 GCACTCGGGCATGTGCTGGCGCTGTATTTTTCCTCGTCGGGGCACCATCATCGAAGCATCACCGG
774 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGG
** * *
17123899 AGAACCTGACCGACGGCATTGGGGTTTCGGGGATCGAGGGGGCCGGGGTGGGGTGTGCGCACA
839 AGAACCTGACCGGTGGCATTGGGG-TTC-CGG-T-GA----------GTGCGGTGTGCG---A
* *
17123962 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT-GCCCTCCTATCCCTCATAAAACCTTGA
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC-CCTATCCCTCATCAAACCTCGA
17124026 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
64 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* *
17124091 TTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAA
129 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
*
17124156 TTTTTTTGTGCATGCCGACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
194 -TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* ** *
17124221 C-CAAAAAATTAAAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
258 CTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
17124285 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
323 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
*** *
17124350 AAATGGCATTGGCA-TGTAGAAATGTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
388 AAATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * * * *
17124414 CGACTTGTGCATCCCGTTTCTTTAGCCGGAGTAGTG-CCCGCCCGCCCGCCCACTCGTTTCGT-G
453 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCGCCCACCCGCCCGCTCGTTTCGTCG
* *
17124477 GATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAAACTC-AGGGTTGCGGTA
518 G-TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAA-TCGAGGGTTGC-GTA
* ** * * *
17124541 GCAGGATAGACAGCACATAGAGGGGGACCCGA-CTGATCCTCGACTTACGCAT-CTCGCCCCTCT
580 GCAGGATCGACAGCACGCAGAGGGGGACCCGATC-GATCCCCGGCTTGCGCATCCT-GCCCCTCT
* * * *
17124604 GGCCGGTTGAGCGCCCGTACACTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGT
643 GGCCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGT
* * * * * *
17124669 CTAAGCATACGGACTTCATTCCCAATCTAAGATTGGATCGGACCGAGGGTTG-TGACAGCACATG
708 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAG-CAGCACATG
* * * * ** * *
17124733 CTGTGCTCGGGCATGTGCTGGTGCCGTATTTTTTTTCATCGAGGCACCATCGTTGGAGAACCTGA
772 CTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAG--CATCA
* * * * ** *
17124798 CCAGCG-GCA-TTG--GGGTTCGGGCGATCGAGGGGGCCGG-G-G-G-GGTGTGGCACA
835 CC-G-GAGAACCTGACCGG-T--GGC-ATTG-GGGTTCCGGTGAGTGCGGTGT-GC-GA
* * *
17124849 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATAAAACCTTGAG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
17124914 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
17124979 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCG-GTTTTTTAGCTGAA
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG-TTTTTAGCTGAA
* *
17125043 TTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCGAAAACTCCTT
194 -TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT
* * **
17125108 CCGAAAAAATTTTGAAAAATCCCGAACCACAAAAAGTTT-AGAAAATCATGAAAAATAGAAAACG
258 CTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA-AAAATCATGAAAAATAGAAAACG
* * * * * *
17125172 AGTCATTTTGCCATGGAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTAC-ATCGAT-
322 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
** * * *** * ** * ** ** *
17125235 -CCACGGC-TCT--CACATCCCGTCTCTTTG--GCCG-GCGTAGTGCCCACCCGCC-CGCT-T--
387 AAAATGGCAT-TGGCACA-CCAG-AAATATGAAGATGTGCCTA-AACCCACCTACCACCCTATCG
* ** * ** ** * *
17125289 A-CC-C-G-TT-CG--T----T-TCGT-TAGTTGGCTTA--G----G--CATACG-GAGTTCATT
448 ATCCACGGCTTGCGCATCCCGTCTC-TCTGGCCGGCGTAGTGCCCCGCCCACCCGCCCGCTCGTT
* ** * * * * * * * * * * * **
17125332 CCCAGTC--TAAGATCAGACCATACTGAGGGT--TGCGGCAG-C-AGGATC-GGCAGCA-C-ACA
512 -TC-GTCGGTTGGCTTAG-GCATACGGA-GTTCATTC-CCAGTCTAAGATCAGACCGAATCGAGG
* * * * * ** **** * * *
17125388 GATGGGGACCTGG-TCGATCCCCAACTTGC-GTATCCCG-CCC-CTCTGGT---CGGCTGAGCGC
572 GTTGCGTAGCAGGATCGA-CAGC-AC--GCAG-AGGGGGACCCGATC-GATCCCCGGCT-TGCGC
* ** * * **** * * * * ***** * *
17125446 --CC-GCACGCTCGTTTCATGGGTTGA-CTTAGGCATAC-GGAGTTCATTCCCAGTC-TAAGCAT
630 ATCCTGC-CCCTC-TGGC--CGGCTGAGCGCCCGCACACTCG-TTTCGTGGGTTGACTTAGGCAT
17125505 ACGGAGTTCATTCCTA--------------------------GTCTAAGATCGGACCAGACCGAG
690 ACGGAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAG
* * * * *
17125544 GGTTACGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGTATTTTTCTTCATCGGGGCACC
755 GGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACC
** * * * * * **
17125609 ATCGTAGGAGAACCTGACC-GACG-ACATTGA--GGTTCCAGCGATCGAGGGGGCCGG-G-G-G-
820 ATCGCCGGAG--CATCACCGGA-GAAC-CTGACCGG-T--GGC-ATTG-GGGTTCCGGTGAGTGC
17125666 GGTGTGCGTACA
876 GGTGTGCG---A
* * *
17125678 TGATGTGTGATGGGTGCTGGTAGTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* * * * *
17125743 AACTCACACCCCCTTAAAGTGCATTTAAGATTTTGCAAGTTTGCTGCTAGTAGCCATTAAAGTGT
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
*
17125808 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAAT
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
*
17125873 TGTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
195 T-TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* *
17125938 TGAAAAAATTTTAAAAAATCTCGAACCGAAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
259 TGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
* *
17126003 TCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAA
324 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* *
17126068 AATGGCAATGG-A-ATTCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
389 AATGGCATTGGCACA-CCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * *
17126131 CGGCTTGCGCATCTCGTCTCTCTGGCCAGCGTA--GCACCCG----CCCGCCCGCTCGTTTCATC
453 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC-CCCGCCCACCCGCCCGCTCGTTTCGTC
* * *
17126190 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGACT-GAGGGTTGCGGCA
517 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC-CGAATCGAGGGTTGC-GTA
* * * * * * * *
17126254 CCAGGATCGGCAGCACGCAGAAGGGGACCCAATCGATCCCCAGTTTGTGCATCCCG-CCCTCTGG
580 GCAGGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGG
* * * * ** *
17126318 CCGACTTAACGCCTGCATGCTTGTTTCGTGGGTTGACTTAGGCATAC---G----------G---
645 CCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCT
* * *
17126367 -AG--T------TT-ATTCCCAGTGTAAGATCGGACC-GAACCGAGGGTTGCATCAGCACATACT
710 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCAGCAGCACATGCT
* * * ** * * * *
17126421 GGGCTCAGGCATTTGTTGGTGCCGTATTTTTCTTCACCGGGGCACCATCGTCGGAGAACCTGACT
774 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAG--CATCACC
* ** * * * ** * *
17126486 GGCGACATTTG---GTTCGACGATCAGGGGGGCC--AGAG-G-GGTGTGCACACA
837 GGAGA-ACCTGACCGGT-GGC-AT-TGGGGTTCCGGTGAGTGCGGTGTG--C-GA
* *
17126534 TGATGTGCGATGGTTGCTGGTACTTGGCCCTTATATT-GCCCCCTATCCCTCATGAAACCTCGAG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* *
17126598 AACTCACACCCCCTTAAAGAGCATTTGCGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAGTG-
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
** * * * * * *
17126662 CCCAAATGGGGACACTTCTTGCTAATGGTGAC-AAATCTTTTACACTTTGAGTTTTTAGCTGAAT
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-
* * *
17126726 TTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAGGTTTGGGGCCAAAACTACTTC
194 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-
* * *
17126791 CT--AAAAATTTTTAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGA
258 CTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
* *
17126854 GTCGTCTTGCCATGAAACTTTCACTTTAAGGCTTAA-GGACCA-TGTATGAATTTACAAGCCATA
323 GTCGTCTTGCCATGAAAC-TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
**
17126917 AAAATGGCATTGGCA-TGCAGAAATATGAAGATGTGCCT-AACCCACCTACCACCCTATCGAT-C
387 AAAATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * *** * * * *
17126979 ACGACTTGCGCATCCCGTTTCTCTGGGCCGTATTAGTGCCCCG---GCCCGCACCGTTTCATTTT
452 ACGGCTTGCGCATCCCGTCTCTCT-GGCCGGCGTAGTGCCCCGCCCACCCGC-CCG-CTCGTTTC
* * * * *
17127041 GTC-GATCG-TTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGC-CACCGAATTGA-GGTTAC
514 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA-T-CAGACCGAATCGAGGGTTGC
* * * * *
17127102 GTAGTAGG-TTG-GAGCACG-AGAGGGGGACCCG-GCTGATTCCCCGACTTGCGCAT-CTCGCCC
577 GTAGCAGGATCGACAGCACGCAGAGGGGGACCCGATC-GA-TCCCCGGCTTGCGCATCCT-GCCC
* * * *
17127162 CTCTGGCCAGCTGAGCGCCCGCACGCTCGTTCCGTGTGTTGACTTAGGCATACGGAGTTCATTCC
639 CTCTGGCCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * * *** * *
17127227 CAGTCTAAGCATACGGAGTTCATTCCCAATATAAGATTGGACTACTTCGAGGGTTACGGCAGCAC
704 TAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAC
* * * * * *
17127292 ATGCTGTGCGCGGGCATGTGCTGGTGTCGCATTTTTCTTCGCCAGGGCACCAT---C---G--T-
769 ATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATC
* *
17127348 --CGGAGAACCTGACCGGTGGCATTGGGGTTTCACCGATTGAAGGGGCTGGGGGTGTGCGCACA
834 ACCGGAGAACCTGACCGGTGGCATTGGGG-TT--CCG-GTG-A---G-T-GCGGTGTGCG---A
17127410 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
17127475 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* *
17127540 CTGAAATGGGGACATTTTTTTCATATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * * * *
17127605 TTTTTTTGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAAATCTTTCT
195 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT
* ** *
17127670 GAAAAAAATTTAAAAAAT-CCGAACCAAAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGT
260 GAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
*
17127734 CGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
325 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
** * *
17127799 ATGGCATTGGCA-TGCAAAAATTTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
390 ATGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * **
17127863 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-CCCGCCCGCCTGCCCGCTTTTTTCGTCGGT
455 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCGCCCACCCGCCCGCTCGTTTCGTCGGT
* ** * *
17127927 TGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATTGGACCGGA-CAGAGGGTTACGGTAGCA
520 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATC-GAGGGTTGC-GTAGCA
* * * *
17127991 GGATCGACAGCATGCAGAGGGGGACCCGGTCGATCCTCGGCTTGCGCAT-CTCGCCCCTCTGGCT
583 GGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCT-GCCCCTCTGGCC
* * * * *
17128055 GGATGAGCGCCCGCACGCTCGTTTCATGGTTTGACTTAGGCATACGGCGTTCATTCCTAGTCTAA
647 GGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAA
* * *
17128120 GCATACGGAGTTCATTCCTAGTCTAAAATCAGACCAGACCGAGGGTTGCAGCAGCACATGCTGGG
712 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCACATGCTGGG
* * * ** * *
17128185 CTCGAGCATGTCCTAGTGCCGTATTTTTCTTCGTCAAGGCACCATCACCGGAG-A--ACC---TA
777 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAGA
* * *
17128244 ACC-GA-CAGT---ATTGGGGTTCCAACGATGAGGGGGGGCCGGGGGGTGTGCGCACA
842 ACCTGACCGGTGGCATTGGGGTT-C--CGGTGA----GTG-C----GGTGTGCG---A
17128297 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
1 -GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* *
17128362 AACTCACACCCCCTTAAAAGGGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTG
65 AACTCACACCCCCTT-AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
* *
17128427 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAG
129 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* *
17128492 TTTCTTTGTGCATGCCAAAAAAAATTCAAGGATCACGTCTACCAAGT
194 TTT-TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
17128539 CTAAGATCGG
Statistics
Matches: 6888, Mismatches: 922, Indels: 677
0.81 0.11 0.08
Matches are distributed among these distances:
825 1 0.00
826 1 0.00
827 3 0.00
828 128 0.02
829 351 0.05
830 6 0.00
831 3 0.00
832 9 0.00
833 11 0.00
834 7 0.00
835 1 0.00
837 1 0.00
838 2 0.00
839 1 0.00
840 1 0.00
841 2 0.00
842 2 0.00
844 1 0.00
847 1 0.00
848 16 0.00
849 50 0.01
850 77 0.01
851 67 0.01
852 144 0.02
853 129 0.02
854 75 0.01
855 111 0.02
856 79 0.01
857 31 0.00
858 122 0.02
859 18 0.00
860 15 0.00
861 15 0.00
862 11 0.00
863 8 0.00
864 2 0.00
865 4 0.00
866 2 0.00
867 2 0.00
868 10 0.00
869 4 0.00
870 32 0.00
872 1 0.00
873 3 0.00
874 1 0.00
875 5 0.00
876 121 0.02
877 105 0.02
878 152 0.02
879 379 0.06
880 48 0.01
881 764 0.11
882 52 0.01
883 24 0.00
884 22 0.00
885 196 0.03
886 19 0.00
887 349 0.05
888 232 0.03
889 46 0.01
890 37 0.01
891 439 0.06
892 3 0.00
893 209 0.03
894 253 0.04
895 6 0.00
896 2 0.00
897 15 0.00
898 133 0.02
899 8 0.00
900 4 0.00
901 532 0.08
902 330 0.05
903 9 0.00
904 482 0.07
905 246 0.04
906 48 0.01
907 57 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (884 bp):
GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTG
AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
TGGCATTGGCACACCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCCGCCCACCCGCCCGCTCGTTTCGTCGGTT
GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTGCGTAGCAGGA
TCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCT
GAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCAT
ACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCACATGCTGGGCTCG
GGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAGAACCT
GACCGGTGGCATTGGGGTTCCGGTGAGTGCGGTGTGCGA
Found at i:17124676 original size:26 final size:26
Alignment explanation
Indices: 17124647--17124699 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17124637 GTTGACTTAG
* *
17124647 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGACTTCATTCCCAATCTAA
*
17124673 GCATACGGACTTCATTCCCAATCTAA
1 GCATACAGACTTCATTCCCAATCTAA
17124699 G
1 G
17124700 ATTGGATCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.28, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACAGACTTCATTCCCAATCTAA
Found at i:17125505 original size:26 final size:26
Alignment explanation
Indices: 17125475--17125527 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17125465 GTTGACTTAG
17125475 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17125501 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17125527 G
1 G
17125528 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17127261 original size:26 final size:26
Alignment explanation
Indices: 17127209--17127261 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17127199 GTTGACTTAG
* *
17127209 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATATAA
17127235 GCATACGGAGTTCATTCCCAATATAA
1 GCATACGGAGTTCATTCCCAATATAA
17127261 G
1 G
17127262 ATTGGACTAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATATAA
Found at i:17128124 original size:26 final size:26
Alignment explanation
Indices: 17128094--17128145 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
17128084 TTTGACTTAG
*
17128094 GCATACGGCGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
17128120 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
17128146 AATCAGACCA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.25, G:0.19, T:0.31
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCTAGTCTAA
Found at i:17128752 original size:26 final size:26
Alignment explanation
Indices: 17128716--17128768 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17128706 GTTGACTTAG
*
17128716 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17128742 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17128768 G
1 G
17128769 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17129700 original size:636 final size:630
Alignment explanation
Indices: 17128910--17130132 Score: 1892
Period size: 636 Copynumber: 1.9 Consensus size: 630
17128900 GGGGTTCCGA
*
17128910 CGATCGAGGGGGCCGGGGGATGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGAGGGGGCCGGGGGATGTGCGCACATGATGTGCAATGGGTGCTGGTACATGGCCCTTATA
* *
17128975 TTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAGACCCCCTTAAAGAGCATTTGAAATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAAATTTGA
* *
17129040 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAAGGTCACAAA
* ** * *
17129105 ATCTTGTACACTTTGAGTTTTTAGCTGAATTATTTTGTGCACGCCAACAAAAATATATGGATCAC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTATTTTAAGCACGCCAACAAAAATACAAGGATCAC
** ** * *
17129170 GTCTACCAGGTATGGGGTTAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CTGAATCGTAAAAA
261 GTCTACCAAATATGGGGCCAAAA-TCCTTCCAAAAAAATTTTAAAAAATCTC-GAACCGTAAAAA
17129234 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAAGCTTAA
324 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAAGCTTAA
* * ** * *
17129299 GGGACCATTGTATGAATTTACCAGCCCTAAAAATGGCATTGGCATGCAGAAATTTGAAGATGTGC
389 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTGC
*
17129364 CTAAACCCACCTACCACCCTATCGATCCACGACTTGCGTATCCCGTCTCTCTGGCCGGCGTAGTG
454 CTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* ** *
17129429 CCAGCCTACCCGCTCGGACGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTAATTCCCAGTC
519 CCAGCCTACCCGC-C---CGCACATTTAATCGGTTGGCTTAGGCATACGAAGTTAATTCCCAGTC
17129494 TAAGATCGGATCGGACCGAGGGTTGCGACAGCTAGCAGAGGGGGACTCGGT
580 TAAGATCGGATCGGACCGAGGGTTGCGACAGCTAGCAGAGGGGGACTCGGT
* *
17129545 CGATCG-GGGGGACCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACATGGCCCTTA
1 CGATCGAGGGGG-CCG-GGGGATGTGCGCACATGATGTGCAATGGGTGCTGGTACATGGCCCTTA
* * * *
17129609 TATTGGTCCCCTATCCCTCATCAGACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
64 TATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAAATTT
17129674 GACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAAGGTCACA
129 GACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAAGGTCACA
* *
17129739 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTAAGCATGCCAACAAAAATACAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTATTTTAAGCACGCCAACAAAAATACAAGGATC
* *
17129804 ACGTGTACCAAATTTGGGGCCAAAATCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAA
259 ACGTCTACCAAATATGGGGCCAAAATCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAA
** * *
17129869 GTTTCAAAAATTGTGAAAAATAGAAAACGGGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
324 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAAGCTTAA
*
17129934 GGTACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTGC
389 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTGC
* * * * *
17129999 CTAAACCGACCTACCACCCTATTGATCCATGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTG
454 CTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * * * *
17130064 CCTGCCTGCCCGCCCGCACGTTTAATCGGTTGGCTTAGGCATACGAAGTTCATTCTCAGTCTAAG
519 CCAGCCTACCCGCCCGCACATTTAATCGGTTGGCTTAGGCATACGAAGTTAATTCCCAGTCTAAG
17130129 ATCG
584 ATCG
17130133 AATCAAACCC
Statistics
Matches: 533, Mismatches: 52, Indels: 10
0.90 0.09 0.02
Matches are distributed among these distances:
631 48 0.09
634 6 0.01
635 234 0.44
636 245 0.46
ACGTcount: A:0.29, C:0.23, G:0.22, T:0.26
Consensus pattern (630 bp):
CGATCGAGGGGGCCGGGGGATGTGCGCACATGATGTGCAATGGGTGCTGGTACATGGCCCTTATA
TTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAAATTTGA
CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAAGGTCACAAA
ATCTTGTACACTTCGAGTTTTTAGCTGAATTATTTTAAGCACGCCAACAAAAATACAAGGATCAC
GTCTACCAAATATGGGGCCAAAATCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGT
TTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAAGCTTAAGG
GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTGCCT
AAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCC
AGCCTACCCGCCCGCACATTTAATCGGTTGGCTTAGGCATACGAAGTTAATTCCCAGTCTAAGAT
CGGATCGGACCGAGGGTTGCGACAGCTAGCAGAGGGGGACTCGGT
Found at i:17130291 original size:26 final size:26
Alignment explanation
Indices: 17130261--17130312 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
17130251 GTTGACTTAG
* * *
17130261 GCATACGGAGTTCATTTCCAGTCTAA
1 GCATACAGAGTTCACTCCCAGTCTAA
17130287 GCATACAGAGTTCACTCCCAGTCTAA
1 GCATACAGAGTTCACTCCCAGTCTAA
17130313 AATCGGACTA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACAGAGTTCACTCCCAGTCTAA
Found at i:17132931 original size:26 final size:26
Alignment explanation
Indices: 17132895--17132946 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17132885 TTGACTTAGC
17132895 CATACAGAGTTCATTC-CTAGTTTAAG
1 CATACAGAGTTCATTCGC-AGTTTAAG
17132921 CATACAGAGTTCATTCGCAGTTTAAG
1 CATACAGAGTTCATTCGCAGTTTAAG
17132947 ATCGGACTGG
Statistics
Matches: 25, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.31, C:0.19, G:0.17, T:0.33
Consensus pattern (26 bp):
CATACAGAGTTCATTCGCAGTTTAAG
Found at i:17133820 original size:26 final size:26
Alignment explanation
Indices: 17133791--17133843 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17133781 GTTGACTTAG
* *
17133791 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCACTCTAA
17133817 GCATACGGAGTTCATTCCCACTCTAA
1 GCATACGGAGTTCATTCCCACTCTAA
17133843 G
1 G
17133844 ACCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCACTCTAA
Found at i:17134369 original size:905 final size:895
Alignment explanation
Indices: 17131958--17134562 Score: 3621
Period size: 905 Copynumber: 2.9 Consensus size: 895
17131948 CATCCTGCCC
* * * * ** * *
17131958 CTCTGGCCTGCTGAGCGCTCGTACGCTTGTTTCGTGGGTTGACTTAGGCATATGGAATTCATTCC
1 CTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* ** * * * *
17132023 CAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAAATCGAACTAAGGGTTGCGACAGCAC
66 TAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGATAGCAC
* * * *
17132088 ATGCTGGGCTCGGGCATGTGCTGGTGCCCCATTTTTCTTCGTCGAGGCACCATCATCGAAGA--A
131 ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGATCA
* * * *
17132151 CC-TG-ACC-GAC-T-GTATTAGGGTTTCGACGATCGAGGGGGCCAGGTGGTGTGCGCACATGAT
196 CCGAGAACCTGACGTGGCATT-GGG-TTCGGCGATCG-GGGGGCCAGGGGGTGTGCGCACATGAT
* *
17132211 -TGCGATGGGTGCTGGTACTTGTCCCTTATATTGGCCTCCTATCCCTCATCAAACCCCGAGAACT
258 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTCGAGAACT
*
17132275 CACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGA
323 CACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * *
17132340 AAGGGGGACACTTGTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
388 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* *** *
17132405 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTACAGCCAAGACTCCTTCCAAA
453 TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
* * *
17132470 AAAATTTTGAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGACAAATAG-AAACGAGTCGT
518 AAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
17132534 CTTTCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
583 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
17132599 GCATTGGCACACA-AAATATAAAGATGTACCTAAACCCACATACCACCCTATCGATCCACGGCTT
648 GCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
17132663 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCACCCGTCCGCCCGCCCACTCGTTTCTTTGGTT
713 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCACCCG-CCCCCCGCCCACTCGTTTCGTCGGTT
* * * *
17132728 GGCTTAGGCATACGGAGTTCATTCCCAGTCGAAGATCGAACTGGACCGAGGGTTGCGGTAGCAGG
777 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAACCGGACCGAGGGTTCCGATAGCAGG
* * * * **
17132793 ATCGATGGCACGCTGAGGGGGACCCGATCGATCCCTGGCTTGCGTATTCCACCA
842 ATCGATAGCACGCAGAGGGGGACCCAATCGATCCCCGGCTTGCACATTCCACCA
* * * *
17132847 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGCCATACAGAGTTCATTCC
1 CTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * * * *
17132912 TAGTTTAAGCATACAGAGTTCATTCGCAGTTTAAGATCGGACTGGATCGAGGGTTACGATAGCAC
66 TAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGATAGCAC
* * *
17132977 AAGCTGGGCTCGGGCATGTG-TGGGTGCCGCATTTTTCTTCATCGGGGCACCATCGCCGGAGAAT
131 ATGCTGGGCTCGGGCATGTGCT-GGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAG-AT
* * * *
17133041 CACCGAGAACCTGGCCGACGGCATTGGG---GGCGATCGGGGGGGCCAGGGGGTTTACGCACATG
194 CACCGAGAACCT-GACG-TGGCATTGGGTTCGGCGATC-GGGGGGCCAGGGGGTGTGCGCACATG
* * *
17133103 ATGTACGATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
256 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTCGAGAA
* *
17133168 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTATCT
321 CTCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
*
17133233 GAAATGGGGACACTTTTTTCAAATGGTCACAAAACCTTGTACACTTCGAGTTTTTAGCTGAATTT
386 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* *
17133298 TTTTGTGCATGCCAAAAAAAATACATGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCA
451 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCA
* *
17133363 AAAAAATTTTAAAAAATCTCGAACCG-AAAAAGGTTTCAAAAATCATGAAAAATAGAAAACGAGT
516 AAAAAATTTTAAAAAATCTTGAACCGCAAAAA-GTTTCAAAAATCGTGAAAAATAGAAAACGAGT
*
17133427 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCGATAAAA
580 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* ** * * *
17133492 CTGGCATTGGCATGCAGAATTATGAAGACGTGCCTAAACCCACCTACCACCCAATCGATCCACGG
645 ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * * *
17133557 CTTGCGCATCCCGTCTCTCAGGCCGGCGTCGTGCCCGCCCGCCCCCCAACCCCCTCATTTCGTCG
710 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCACCCGCCCCCC-GCCCACTCGTTTCGTCG
*
17133622 GTTGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGATC-AGACCGGACCGAGGGTTCCGATAG
774 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGA-ACCGGACCGAGGGTTCCGATAG
17133686 CAGGATC-AGTAGCACGCAGAGGGGGACCCAA-CTGATCCCCGGCTTGCACATCTCGC-CC-
838 CAGGATCGA-TAGCACGCAGAGGGGGACCCAATC-GATCCCCGGCTTGCACAT-TC-CACCA
* * *
17133744 CTCTGGCTGGCTGTGCACCCGCATGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
1 CTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * *
17133809 TAGTCTAAGCATACGGAGTTCATTCCCACTCTAAGACCGGACCGGACCAAGGGTTGCGGTAACAC
66 TAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGATAGCAC
*
17133874 ATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATC
131 ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAG-ATC
*
17133939 ACCGGAGAACCTGATCGGTGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGAGTGTGCGCA
195 ACC-GAGAACCTGA-C-GTGGCATT-GGGTT-CGGCGATCGGGGGGCC--AGGGG-GTGTGCGCA
* * * *
17134004 CATGATGTGCGATGGATGCTGGTACATGGCCCTTATATTTGCTTCCTATCCCTCATCAAACCTCG
252 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTCG
* * *
17134069 AGAACTCATACCCTCTTAAAGAGCACTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGT
317 AGAACTCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * *
17134134 GTCTGAAATTGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAAACTTCGAGTTTTTGGCTGA
382 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
17134199 ATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCTAGTTTGGGGCCAAAACTCCT
447 ATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * *
17134264 TCCGAAGAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACG
512 TCCAAAAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* * *
17134329 AGTTGTCTTGCCATGAAACTTCACGTGAAGGCTGAAGGGACCATTGTAAGAATTTACAAGCCATA
577 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* *
17134394 AAAATGGCAATGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
642 AAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * * *
17134459 CAGCTTGTGCATCCCGTCTCTCTGGCCGGCATAGCGCCCACCTGCCCGCCGCCCGCTCGTTTCGT
707 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCACCCGCCCCCCGCCCACTCGTTTCGT
* * *
17134524 CAGTTGGCTTAGGCATATGGAGCTCATTCCCAGTCTAAG
772 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
17134563 CATACGGAGT
Statistics
Matches: 1507, Mismatches: 174, Indels: 55
0.87 0.10 0.03
Matches are distributed among these distances:
888 1 0.00
889 160 0.11
890 1 0.00
892 3 0.00
893 1 0.00
894 38 0.03
895 283 0.19
896 94 0.06
897 363 0.24
898 23 0.02
899 9 0.01
902 8 0.01
903 7 0.00
904 51 0.03
905 460 0.31
906 5 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (895 bp):
CTCTGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
TAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGATAGCAC
ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGATCA
CCGAGAACCTGACGTGGCATTGGGTTCGGCGATCGGGGGGCCAGGGGGTGTGCGCACATGATGTG
CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTCGAGAACTCAC
ACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
ATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
TTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
CATCCCGTCTCTCTGGCCGGCGTAGTGCCCACCCGCCCCCCGCCCACTCGTTTCGTCGGTTGGCT
TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAACCGGACCGAGGGTTCCGATAGCAGGATCG
ATAGCACGCAGAGGGGGACCCAATCGATCCCCGGCTTGCACATTCCACCA
Found at i:17134576 original size:26 final size:26
Alignment explanation
Indices: 17134536--17134588 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17134526 GTTGGCTTAG
*
17134536 GCATATGGAGCTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
*
17134562 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
17134588 G
1 G
17134589 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAGTCTAA
Found at i:17135216 original size:743 final size:745
Alignment explanation
Indices: 17133781--17135229 Score: 2219
Period size: 743 Copynumber: 1.9 Consensus size: 745
17133771 CATTTCGTGG
* *
17133781 GTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCACTCTAAGAC
1 GTTGACTTAGGCATACGGAGCTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCACTCTAAGAC
* * * ** *
17133846 CGGACCGGACCAAGGGTTGCGGTAACACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTC
66 CGGACCAGACCAAGGGTTGCGATAACACATGCTGGGCCCGGGCATGTGCTGGTGCCACAATTTTC
* * * ** *
17133911 TTCGTCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGATCGGTGGCATTGGGGTTCCGGCG
131 TTCCTCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCGGCAGCATTGGGGTTCCGACG
17133976 ATCGGGGGGCCGGGGGGGAGTGTGCGCACATGATGTGCGATGGATGCTGGTACATGGCCCTTATA
196 ATCGGGGGGCCGGGGGGGAGTGTGCGCACATGATGTGCGATGGATGCTGGTACATGGCCCTTATA
* * * *
17134041 TTTGCTTCCTATCCCTCATCAAACCTCGAGAACTCATACCCTCTTAAAGAGCACTTGAGATTTTA
261 TTGGCTCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCACTTGAGATTTTA
** *
17134106 CAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATTGGGACACTTTTTTCAAATGGTCACAAA
326 CAAGTTTGCTGCCAGTAGCCATTAAAGTGTCCAAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
17134171 ATCTTGTAAACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCAT
391 ATCTTGCAAACTTCGAGTTTTTGGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCAC
* * * * *
17134236 GTCTACCTAGTTTGGGGCCAAAACTCCTTCCGAAGAAATTTTAAAAAATCTTGAACCGCAAAAAG
456 GTATACCAAGTTTGGGGCCAAAACACCTTCCGAAAAAATTTTAAAAAATCATGAACCGCAAAAAG
* **
17134301 TTTTAAAAATCGTGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTGAAG
521 TTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTGAAG
* * *
17134366 GGACCATTGTAAGAATTTACAAGCCATAAAAATGGCAATGGCACATAGAAATATGAAGATGTGCC
586 GGACCATTGTAAGAATTTACAACCCATAAAAATGGCAATGGCACACAGAAATATAAAGATGTGCC
*
17134431 TAAACCCACCTACCACCCTATCGATCCACAGCTTGTGCATCCCGTCTCTCTGGCCGGCATAGCGC
651 TAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGCGC
17134496 CCACCTGCCCGCCGCCCGCTCGTTTCGTCA
716 CCACCTGCCCGCCGCCCGCTCGTTTCGTCA
* * * *
17134526 GTTGGCTTAGGCATATGGAGCTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
1 GTTGACTTAGGCATACGGAGCTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCACTCTAAGAC
** * * *
17134591 CGGACCAGATTGAA-GGTTGCGATAGCACATGTTGGGCCCGGGCATGTGTTGGTGCCACAATTTT
66 CGGACCAGA-CCAAGGGTTGCGATAACACATGCTGGGCCCGGGCATGTGCTGGTGCCACAATTTT
**
17134655 CTTCACT-GGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCAGCATTGGGGTTCCGA
130 CTTC-CTCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCGGCAGCATTGGGGTTCCGA
* * *
17134719 CGATCGGGGGGGCC-GGGGGG-GTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
194 CGATC-GGGGGGCCGGGGGGGAGTGTGCGCACATGATGTGCGATGGATGCTGGTACATGGCCCTT
*
17134782 ATATTGGC-CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
258 ATATTGGCTCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCACTTGAGATT
* *
17134846 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCAAAATGGGGACACTTTTTTCAAATGGTCGC
323 TTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCCAAAATGGGGACACTTTTTTCAAATGGTCAC
* * *
17134911 AAAATCTTGCACACTTTGAGTTTTTAGG-TGAATTTTTTTATGCATGCCAACAAAAATACAAGGA
388 AAAATCTTGCAAACTTCGAGTTTTT-GGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGA
* * *
17134975 TTACGTATACCAAGTTTGGGGCCAAAACACCTTTCGAAAAAATTTTAAAAAATCATGAATCGCAA
452 TCACGTATACCAAGTTTGGGGCCAAAACACCTTCCGAAAAAATTTTAAAAAATCATGAACCGCAA
*
17135040 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATTAAACTTCACGTGAAGGCT
517 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCT
* * * * *
17135105 TAAGGGACCATTGTATGAATTTGCAACCCATAAAAATGGCATTGGCACGCAGAAATATAAAGATG
582 GAAGGGACCATTGTAAGAATTTACAACCCATAAAAATGGCAATGGCACACAGAAATATAAAGATG
17135170 TGCCTAAACCCACCTACCACCCTATCGATCCAC-GACTTGCGCATCCCGTCTCTCTGGCCG
647 TGCCTAAACCCACCTACCACCCTATCGATCCACAG-CTTGCGCATCCCGTCTCTCTGGCCG
17135230 ACGTGGACCA
Statistics
Matches: 634, Mismatches: 65, Indels: 12
0.89 0.09 0.02
Matches are distributed among these distances:
742 1 0.00
743 399 0.63
744 49 0.08
745 174 0.27
746 11 0.02
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (745 bp):
GTTGACTTAGGCATACGGAGCTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCACTCTAAGAC
CGGACCAGACCAAGGGTTGCGATAACACATGCTGGGCCCGGGCATGTGCTGGTGCCACAATTTTC
TTCCTCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCGGCAGCATTGGGGTTCCGACG
ATCGGGGGGCCGGGGGGGAGTGTGCGCACATGATGTGCGATGGATGCTGGTACATGGCCCTTATA
TTGGCTCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCACTTGAGATTTTA
CAAGTTTGCTGCCAGTAGCCATTAAAGTGTCCAAAATGGGGACACTTTTTTCAAATGGTCACAAA
ATCTTGCAAACTTCGAGTTTTTGGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCAC
GTATACCAAGTTTGGGGCCAAAACACCTTCCGAAAAAATTTTAAAAAATCATGAACCGCAAAAAG
TTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTGAAG
GGACCATTGTAAGAATTTACAACCCATAAAAATGGCAATGGCACACAGAAATATAAAGATGTGCC
TAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGCGC
CCACCTGCCCGCCGCCCGCTCGTTTCGTCA
Found at i:17136296 original size:26 final size:26
Alignment explanation
Indices: 17136266--17136318 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17136256 GTTGACTTAG
17136266 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
17136292 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17136318 G
1 G
17136319 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17137273 original size:464 final size:464
Alignment explanation
Indices: 17136399--17137318 Score: 1576
Period size: 464 Copynumber: 2.0 Consensus size: 464
17136389 GTCGGGGCAC
* **
17136399 CATCGCCGGAGAACCTGACCAGCGGTATTGGGGTTCCGGCGATCGGGGGGGCCAGGGGGTGTGTG
1 CATCGCCGGAGAACCTGACCAGCGCTATTGGGGTTCCGGCGATCGGGGGGGCCAGGGGGTGTACG
* * *
17136464 CACATGATGTGTGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCTTCTCCCTCATCAAACCT
66 CACATGATGTGTGATGGGTGCTAGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCT
*
17136529 CGAGAACTCACACCCCCTTAAACAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGGCATTAAA
131 CGAGAACTCACACCCCCTTAAACAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
*
17136594 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACGTCGATTTTTTTGCT
196 GTGTCTGAAATGGGGACACTTTATTCAAATGGTCACAAAATCTTGTACACGTCGATTTTTTTGCT
* *
17136659 GAATTTTTTTGCGCGTGCCAAAGAAAATACAAGGATCACATCTACCAAGTTTGGAGCCAAAACTC
261 GAATTTTTTTGCGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGAGCCAAAACTC
17136724 CTTCCAAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
326 CTTCCAAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
* *
17136789 CGAGTCGTCTTGCCATGAAACTCCATGTGAAGGCTTAAGGGACCATGGTATGAATTTACAAGCCA
391 CGAGTCGTCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGACCATGGTATGAACTTACAAGCCA
17136854 TCATCGGAG
456 TCATCGGAG
* * *
17136863 CATCGTCGGAGAACCTGACC-GACAGCT-TTGGGGTTCCGGTGATCGGGGGGGCCGGGGGGTGTA
1 CATCGCCGGAGAACCTGACCAG-C-GCTATTGGGGTTCCGGCGATCGGGGGGGCCAGGGGGTGTA
*
17136926 CGCACATGATGT-TCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
64 CGCACATGATGTGT-GATGGGTGCTAGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAA
* *
17136990 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATT
128 CCTCGAGAACTCACACCCCCTTAAACAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* *
17137055 AAAGTGTCTGAAATGGGGACACTTTATTCAAATGGTGACAAAATCTTGTACACTTCGATTTTTTT
193 AAAGTGTCTGAAATGGGGACACTTTATTCAAATGGTCACAAAATCTTGTACACGTCGATTTTTTT
* * *
17137120 GCTGAATTTTTTTGGGCATGGCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAA
258 GCTGAATTTTTTTGCGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGAGCCAAAA
*
17137185 CTCCTTCCAAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGA
323 CTCCTTCCAAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGA
17137250 AAACGAGTCGTCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGACCATGGTATGAACTTACAAG
388 AAACGAGTCGTCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGACCATGGTATGAACTTACAAG
17137315 CCAT
453 CCAT
17137319 AAAAATGGCA
Statistics
Matches: 429, Mismatches: 24, Indels: 6
0.93 0.05 0.01
Matches are distributed among these distances:
463 2 0.00
464 425 0.99
465 2 0.00
ACGTcount: A:0.30, C:0.22, G:0.22, T:0.26
Consensus pattern (464 bp):
CATCGCCGGAGAACCTGACCAGCGCTATTGGGGTTCCGGCGATCGGGGGGGCCAGGGGGTGTACG
CACATGATGTGTGATGGGTGCTAGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCT
CGAGAACTCACACCCCCTTAAACAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
GTGTCTGAAATGGGGACACTTTATTCAAATGGTCACAAAATCTTGTACACGTCGATTTTTTTGCT
GAATTTTTTTGCGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGAGCCAAAACTC
CTTCCAAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
CGAGTCGTCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGACCATGGTATGAACTTACAAGCCA
TCATCGGAG
Found at i:17138973 original size:884 final size:879
Alignment explanation
Indices: 17136851--17143627 Score: 8496
Period size: 884 Copynumber: 7.6 Consensus size: 879
17136841 AATTTACAAG
* * * *
17136851 CCATCATCGGAGCATCGTCGGAGAACCTGACCGACAGCTTTGGGGTTCCGGTGATCGGGGGGGCC
1 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
* * * *
17136916 GGGGGGTGTACGCACATGATGTTCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCC
66 GGGGGGGGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
*
17136981 CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCA
131 CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
* *
17137046 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTATTCAAATGGTGACAAAATCTTGTACACTTC
196 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
* * * * *
17137111 GATTTTTTTGCTGAATTTTTTTGGGCATGGCAAAAAAAATACAAGGATCACATCTACCAAGTTTG
261 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTG
* *
17137176 GGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATG
326 GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATG
* *
17137241 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGACCATGGTATGA
391 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGA
* * * *
17137306 ACTTACAAGCCATAAAAATGGCATTGGCACACAAAAATATTAAGATGTGCCTAAACCCACCTACC
456 ATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACC
* ** * * *
17137371 ACTCTATCTTTCCACGGCTTGTGCATCCCGTCTCTCTGGCCGACATAGTGCCCGCCCACCCGTCC
521 ACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--CG----CCTG-CC
* * * * * *
17137436 GCCCTCCGCCCTTCCGCTCGTTTCGCCGGTTTGCTTAGGCATATGAAGTTCATTCCCAGTCTAAG
579 -CGC-CCGCCCTCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* ** * * * * *
17137501 AT-TGAACTGGACTGAGGGTTATAGCAACAGGA-TGGACGGCACGCAGAAGGGGACCCGACCGAT
642 ATCAG-ACCAGACCGAGGGTTATGGTAGCAGGATTGG-CAGCACGCAGAAGGGGACCCGACCGAT
* * *
17137564 CCTCGACTTGCGCATCCCGCCCCTTTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGAC
705 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGAC
* * *
17137629 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGACGGTTGCGGCAGCACATGC
770 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGTGGCAGCACATGC
* * * *
17137694 TGGACTCGAGCATGTGTTGGTGCTGCAGTTTTCTTCACCGGGGCA
835 TGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
* *
17137739 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTAGGGTTCTGGCGATCGGGGGGGCC
1 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
* *
17137804 GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCCTCTC
66 GGGGGGG-GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
* *
17137869 TCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
130 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
*
17137934 AGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
195 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* * ** *
17137999 CGATTTTTTTGCTGAATTTTTTTGCACGTGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
260 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * *
17138064 GGGGCCAAAAATCCTTCTGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCAT
325 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCAT
* * *
17138129 GAAAAATAGAAAATGAGTCGTCTGGCCATGAAACTTCACGTGAAGGCTTAAGGGGCCATTGTATG
390 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
* ** * *
17138194 AATTTACAATCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACTCACATAC
455 AATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
* * * *
17138259 GACCCTATCGATCAACGGTTTGCGCATCCCGTCTCTCTGGCTGACGTAGTGTCCGCCTGCCCGCC
520 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--CGCCTGCCCGCC
* * *
17138324 CGCCCTTCCTTCTGCTCGTTTCGTCGATCGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGAT
583 CGCCC-TCC--C-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
* * * * *
17138389 CAGACCAGACCGAGGGTTATGGTAGCAGGATTGGCAACACGTAAAAGGGGACCTGGCCGATCCCC
644 CAGACCAGACCGAGGGTTATGGTAGCAGGATTGGCAGCACGCAGAAGGGGACCCGACCGATCCCC
* * * *
17138454 GGCTTGCGCATCCCGCCCCTCTGGTCGGCTAAGCACCCGTACGCTCATTTCGTGGGTTGACTTAG
709 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAG
* *
17138519 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACTAGACCAAGGGTTGTGGCAGCACATGCTGGG
774 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * *
17138584 ATCGAGCATGTGTTGGTGCCGCATTTTTCTTCACTGGGGCA
839 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
* * *
17138625 CCATCATCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGTGATC-GGGGGGCC
1 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
* *
17138689 GGGGGGGGTCCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
66 GGGGGGGGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
* *
17138754 CTCATCAAACCTCAAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
131 CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
*
17138819 GTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
196 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
* *
17138884 GATTTTTTAGCTGAATTTTTTTCG-ACATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
261 GAGTTTTTAGCTGAATTTTTTT-GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * * *
17138948 GGGGCCAAAACTCCTTCCAAAAAAATTTTCAAAATTCCCAAACCGTAAAAAGTTTCAAAAAACAT
325 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCAT
* ** *
17139013 GAAAAATAGAATACGAGTCGTCTTGCTTTGAAACTCCACGTGAAGGCTTAAGGGACCATTGTATG
390 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
* *
17139078 AATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATTAAGATGTGCCTAAAACCACCTAC
455 AATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
* *
17139143 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACATAGTGC-CC-GCGCGCCCG
520 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCGCCTGCCCGCCCG
* * * * *
17139206 CCCGCTCGCTCGTTTCATCGGTTGGCTTAGGCATACGTAGTTCATTCCTAGTCTAAGATCAGACC
585 CCCTCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC
* * * * * * ** * *
17139271 GGACCGAGGGTTATAGCAGTAGAATCGGTGGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTG
650 AGACCGAGGGTTATGGTAGCAGGATTGGCAGCACGCAGAAGGGGACCCGACCGATCCCCGGCTTG
** * * *
17139336 CGCATCCCGCCCCTCTGGCCGGCTGAGCACTTGCATGCTCGTTTCTTTGGTTGACTTAGGCATAC
715 CGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
17139401 GGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAATCTAAGATTGGACAGGATCGAGGG
780 GGAGTTCATTCCCAGTCTAAG-AT-C-G-G----------A-CT---A---GAC-----CGAGGG
* * * *
17139466 TTCTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGTCGTATTTTTCTTCACCGAGGCA
819 TTGTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
* * * *
17139527 CCATCGCCGGAGCAACATCGGAGAACCTGACCGACGGCATTAGGGTTCCGGCGATCGGGGGGGCC
1 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
** ** *
17139592 GAGGGGGTTATGATCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTAT
66 G-GGGGG-GGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
*
17139657 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCCTGC
129 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
* * *
17139722 CAGTAGCTATTAAAGTGCCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACT
194 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * * * *
17139787 TCGAGTTTTTAGCTGAAGTTTTTTGTGCGTGCCAAAAAAAATACAAGGATTACATCTACAAAGTT
259 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTT
* * * * ** * * * * *
17139852 TAGGGCTAAAACACCTACTAAAAAAATTTGAAAAAATCTCGAACCGCAGAAAGTTTCAAAAATCG
324 TGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCA
* * *
17139917 TGAAAAATAGAAAACGGGTCGTCCTGCCATGAAACTTCACGTGAAGGCTTAAGGG-CTATTGTAT
389 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
* *
17139981 GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATCAAGATGTGCCTAAACCCACCTA
454 GAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTA
* * * *
17140046 CCACCTTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGCGCCCGCCCGCTCGC
519 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--CGCCTGCCCGC
* * * * * ** *
17140111 CCACCCGCCCGCTCGTTCCATCGGTTGGCTTAGGCATATGGAGTTCATTCAAAATCTAAGATCAG
582 CCGCCCTCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG
* * * * * * * * * *
17140176 ACCAGACCAACGGTTATGGTAGCAGGACTGACTGCATGGAG-AGGAGGAGCCAACCGATCCCAGG
647 ACCAGACCGAGGGTTATGGTAGCAGGATTGGCAGCACGCAGAAGG-GGACCCGACCGATCCCCGG
* * * *
17140240 CTTGCGCATCCCACCCCTCTAGCCGGCTGGGCACCCGCACGATCATTTCGTGGGTTAACTTAGGC
711 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACG--C---TCGT---TT--CGT-GG-
*
17140305 ATATTGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCG
764 --GTTGA---C-TT---AG-----GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCG
* ** * * * *
17140370 ATGGTTACGGCAACACATGCTAGGCTCGGGAATGTGTTGGTGCCGCATTTTTCTTC-CTGGGG--
815 AGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
* *
17140432 -CA----C----CATCGTCGGAGAACCTAACCGACGGCATTGGGGTTTCGGCGATCGGGGGGGCC
1 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
* * *
17140488 GGGGGGGTGTGCGCATATGATGTGCAATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATC
66 GGGGGGG-GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
*
17140553 CCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
130 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
17140618 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
195 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* *
17140683 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCCCGTCTACCAAGTTT
260 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * * *
17140748 GGCGTCAAAACACCTTCTGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCAT
325 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCAT
17140813 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
390 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
*
17140878 AATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
455 AATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
* * * * * * * *
17140943 CACCCTATCGATCCATGGCTTACGTATACGGTCTCTC-GGCCGGCGTAGTGC-CC-GCCCGTCTG
520 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCGCCTGCCCGCCCG
** * * * *
17141005 TTCGCCCGCTCGTTTCGTTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTTTCAGATCAGACC
585 CCCTCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC
* *** * * * *
17141070 AGATCGAGGGTTGCAGCAGCAGGATTGGCAGCATGCAGAAGGAGGACCCGACCGATCCTCGACTT
650 AGACCGAGGGTTATGGTAGCAGGATTGGCAGCACGCAGAAGG-GGACCCGACCGATCCCCGGCTT
* * * * *
17141135 GCGCATCCTGCCCCTCTGTCCGACTGAGCATCCGCACGCTCGTTTCATGGGTTGACTTAGGCATA
714 GCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
* *
17141200 CGGAGTTCATTCCCAATTTAAGATCGGA-TAGGACCGAGGGTT-TCGGCAGCACATGCTGGGCTC
779 CGGAGTTCATTCCCAGTCTAAGATCGGACTA-GACCGAGGGTTGT-GGCAGCACATGCTGGGCTC
** * *
17141263 AAGCATGTGTTGGTGCCGCATTTTTCTTTATCGGGGCA
842 GGGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
* * * *
17141301 CCATC-TCTGGGGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTTCGACAATCGGGGGGGC
1 CCATCGTC-GGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGC
** * *
17141365 CGGGGGGCTTATGCGCACATGGTGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
65 CGGGGGG--GGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* * * *
17141430 TCCCTCATCAAATCTCGACAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGTTG
128 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
*
17141495 CTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
193 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* ** * *
17141560 TTCGAGTTTTTAGCTAAATTTTTTTGTGCATGCCACCAAAAATACAAGGATCACCTATACCAAG-
258 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
* * *
17141624 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAGCCGTAAAAAGTTTCAGAAATC
323 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC
* * *
17141689 GTGAAAAATAGAAAACGAGTCGTCTGGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTA
388 ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* *
17141754 TGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCTACCT
453 TGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCT
* * *
17141819 ACCACCCTATCGATCCACAGCTTGCGCATCCCGTTTCTCTGGTCGACGTAGT--G-CT---CGCC
518 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCGCCTGCCCGCC
* *
17141878 CG----CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGA
583 CGCCCTCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA
* * * * * * * *
17141939 CCGGACCGAGGGTTTTGCTAGAAGGATCT-GCAGCACACAGAGGGGGACCC-AGTCGATCCCCGA
648 CCAGACCGAGGGTTATGGTAGCAGGAT-TGGCAGCACGCAGAAGGGGACCCGA-CCGATCCCCGG
* * * * * * *
17142002 CTTGCACATCCTGCCCCTCTGGCCGACTGAGCGCCCGTACGCACGTTTCATGGGTTGACTTAGGC
711 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
*
17142067 ATACGGAGTTCATT-CCAGTGTAAGCATACAGAGTTCATTCCCAATCTAAGATCAGACCGGAATG
776 ATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G----------A-C-----T-AGACC-----G
* * * * * **
17142131 AGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTTTTTGCCGGGGCA
815 AGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
* * * *
17142196 CCATCGTCGGAGCGTCGCCGGAGAACCTGACCG-CGGCATTGGGGTTCAGGCGATCGGGGGGGTC
1 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
* **
17142260 GGGGGGCTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTCACCCTTATATTGGCCCCCTATC
66 GGGGGG-GGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
* *
17142325 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTACC
130 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
* * *
17142390 AGTAGCCATTAAAGTGTTTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCTTGTACACAT
195 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* *
17142455 CGAGTTTTTAGCTGAATTTTTTTGTGCATTCCAACAAAAATACAAGGATCACGTCTACCAAGTTT
260 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * **
17142520 GGGGCCAAAACTCCTTCCGAAAAAA-TTTAAAAGAGTCCCAAACCGTAAAAAGTTTTGAAAATCA
325 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA-AATCCCGAACCGTAAAAAGTTTCAAAAATCA
* * * * *
17142584 TAAAAAATAGAAAACAAGTCATCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCGTTGTAT
389 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
* * *
17142649 GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGGAATATGAAGATGTGTCTAAACCCACCTA
454 GAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTA
* * * * * * *
17142714 CCACCCTATCGATTCACGGCTTGCACATCCCGTCTCTCTGGTCGGCATAG-ACACCT-CCCGCCC
519 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCGCCTGCCCGCCC
* * *
17142777 G---T-CCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGAT
584 GCCCTCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
* ** * * *** * * * *
17142838 CAAATTGAGGGTTACGATAGCAGGATCAACAGCACGCAGAGGGGGACCCGACTGATCTCCAGCTT
649 CAGACCGAGGGTTATGGTAGCAGGATTGGCAGCACGCAGAAGGGGACCCGACCGATCCCCGGCTT
* * * *
17142903 GCGCATCTCGCCCCTCTGGCTGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
714 GCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
* *
17142968 TGGAGTTCATTCCCAGTCTAAGATCGGA-TCAGACCGAGGGTTGTGGCAGCACATGCTGGACTCG
779 CGGAGTTCATTCCCAGTCTAAGATCGGACT-AGACCGAGGGTTGTGGCAGCACATGCTGGGCTCG
* * **
17143032 GGCATGTGCTGGTGCCACATTTTTCTTTGCCGGGGCA
843 GGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
* * * * * *
17143069 TCATCGTTGGAGCATCGTTGAAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGAGGGGCC
1 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
* * *
17143134 AGGGGGGGTGTTCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTAT
66 -GGGGGGG-GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* *
17143199 CCCTCATCAAACCTCCAGAACTCAAACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
129 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
* * *
17143264 CAGTAGCCATTAAAGAGTCTGGAATGGGGACGCTTTTTTCAAATGGTCACAAAATCTTGTACACT
194 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
** * * * *
17143329 TCGAGTTTTTAATTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATTACGGCTACCAAGTT
259 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTT
* * * **
17143394 TGGGGCCAAAACTCATTCTGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTAAAAAAATCA
324 TGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCA
*
17143459 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGGGAAGGCTTAAGGGACCATTGTAT
389 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
17143524 GAATTTACAAGCCATAAAAATGGCATTGGCA---AG--ATATGAAGATGTGCCTAAACCCACCTA
454 GAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTA
* * * * *
17143584 CCACCCTATCGATCCTCGGCTGGTGCATCCCGCCCCTCTGGCCG
519 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
17143628 GCTGAGCATC
Statistics
Matches: 5154, Mismatches: 598, Indels: 292
0.85 0.10 0.05
Matches are distributed among these distances:
865 2 0.00
866 83 0.02
867 4 0.00
869 9 0.00
870 154 0.03
871 88 0.02
872 4 0.00
873 91 0.02
874 29 0.01
875 380 0.07
876 188 0.04
877 4 0.00
878 280 0.05
879 244 0.05
880 12 0.00
881 4 0.00
882 9 0.00
883 5 0.00
884 460 0.09
885 21 0.00
886 298 0.06
887 8 0.00
888 65 0.01
889 458 0.09
890 7 0.00
891 89 0.02
892 54 0.01
893 238 0.05
894 245 0.05
895 440 0.09
896 158 0.03
897 4 0.00
898 177 0.03
899 10 0.00
900 1 0.00
902 108 0.02
903 9 0.00
904 127 0.02
905 329 0.06
906 1 0.00
907 8 0.00
908 190 0.04
910 1 0.00
913 7 0.00
916 3 0.00
918 3 0.00
919 3 0.00
920 1 0.00
922 4 0.00
925 1 0.00
926 2 0.00
929 2 0.00
930 1 0.00
931 1 0.00
932 1 0.00
933 2 0.00
934 27 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (879 bp):
CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC
GGGGGGGGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTG
GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATG
AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGA
ATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACC
ACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCGCCTGCCCGCCCGC
CCTCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCA
GACCGAGGGTTATGGTAGCAGGATTGGCAGCACGCAGAAGGGGACCCGACCGATCCCCGGCTTGC
GCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACG
GAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGC
ATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCA
Found at i:17139424 original size:26 final size:26
Alignment explanation
Indices: 17139395--17139447 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17139385 GTTGACTTAG
* *
17139395 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
17139421 GCATACAGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
17139447 G
1 G
17139448 ATTGGACAGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:17140706 original size:895 final size:891
Alignment explanation
Indices: 17138519--17143627 Score: 6084
Period size: 895 Copynumber: 5.7 Consensus size: 891
17138509 GTTGACTTAG
* * * *
17138519 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACTAGACCAAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
17138584 ATCGAGCATGTGTTGGTGCCGCATTTTTCTTCACTGGGGCACCATCATCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTC-CTGGGGCA-C--CATC---G--T---CGGAGA
* *
17138649 ACCTGACCGACGGCATTGGGGTTCCGGTGATC-GGGGGGCCGGGGGGG-GTCCGCACATGATGTG
119 ACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* *
17138712 CAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
184 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
17138777 ACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
249 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
17138842 AGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCTGAATTTTTTTC
314 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT-
* *
17138907 G-ACATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
378 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * *
17138971 AATTTTCAAAATTCCCAAACCGTAAAAAGTTTCAAAAAACATGAAAAATAGAATACGAGTCGTCT
443 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
** *
17139036 TGCTTTGAAACTCCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
508 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
17139101 ATTGGCACGCAGAAATATTAAGATGTGCCTAAAACCACCTACCACCCTATCGATCCACGGCTTGC
573 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
17139166 GCATCCCGTCTCTCTGGCCGACATAGTGCCCG--CG--CGCCCGCCCGCTCGCTCGTTTCATCGG
638 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCTCGCCCGCCCGCCCGCTCGTTTCGTCGG
* * * * * *
17139227 TTGGCTTAGGCATACGTAGTTCATTCCTAGTCTAAGATCAGACCGGACCGAGGGTTATAGCAGTA
703 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTATGGTAGCA
* *** *
17139292 GAATCGGTGGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
768 GGAT-GACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
** * * **
17139357 GCTGAGCACTTGCATGCTCGTTTCTTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
832 GCTGAGCACCCGCACGCTCGTTTC-GTGGTT-ACTTAGGCATATTGAGTTCATT-CCAGT-TAA
* * *
17139421 GCATACAGAGTTCATTCCCAATCTAAGATTGGAC-AGGATCGAGGGTT-CTGGCAGCACATGCTG
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACTA-GACCGAGGGTTGC-GGCAGCACATGCTG
* * * *
17139484 GGCTCGGGCATGTGTTGGTGTCGTATTTTTCTTCACCGAGGCACCATCGCCGGAGCAACATCGGA
64 GGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTC-CTGGGGCACCAT---C---G-----TCGGA
* * * **
17139549 GAACCTGACCGACGGCATTAGGGTTCCGGCGATCGGGGGGGCCGAGGGGGTTATGATCACATGAT
117 GAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGGTGTGCGCACATGAT
*
17139614 GTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
181 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
17139679 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCTATTAAAGTGCCTGA
246 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17139744 AATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTT
311 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * * * * * **
17139809 TTGTGCGTGCCAAAAAAAATACAAGGATTACATCTACAAAGTTTAGGGCTAAAACACCTACTAAA
376 TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * * * *
17139874 AAAATTTGAAAAAATCTCGAACCGCAGAAAGTTTCAAAAATCGTGAAAAATAGAAAACGGGTCGT
441 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
* *
17139939 CCTGCCATGAAACTTCACGTGAAGGCTTAAGGG-CTATTGTATGAATTTACAAGCCATAAAAATG
506 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
17140003 GCATTGGCATGCAGAAATATCAAGATGTGCCTAAACCCACCTACCACCTTATCGATCCACGGCTT
571 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * *
17140068 GCGCATCCCGTCTCTCTGGCCGACGTAGCGCCCGCCCGCTCGCCCACCCGCCCGCTCGTTCCATC
636 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCTCGCCCGCCCGCCCGCTCGTTTCGTC
* ** * * *
17140133 GGTTGGCTTAGGCATATGGAGTTCATTCAAAATCTAAGATCAGACCAGACCAACGGTTATGGTAG
701 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTATGGTAG
* * * * * * * * *
17140198 CAGGACTGACTGCATGGAGAGGAGGAGCCAACCGATCCCAGGCTTGCGCATCCCACCCCTCTAGC
766 CAGGA-TGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * *
17140263 CGGCTGGGCACCCGCACGATCATTTCGTGGGTTAACTTAGGCATATTGAGTTCATTCCCAGTCTA
830 CGGCTGAGCACCCGCACGCTCGTTTCGT-GGTT-ACTTAGGCATATTGAGTTCATT-CCAGT-TA
17140328 A
891 A
* * * * *
17140329 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGATGGTTACGGCAACACATGCTAGG
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
17140394 CTCGGGAATGTGTTGGTGCCGCATTTTTCTTCCTGGGGCACCATCGTCGGAGAACCTAACCGACG
66 CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCCTGGGGCACCATCGTCGGAGAACCTGACCGACG
* * * *
17140459 GCATTGGGGTTTCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCATATGATGTGCAATGGGTACTG
131 GCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
*
17140524 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAG
196 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
17140589 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
261 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
*
17140654 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
326 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * * * *
17140719 AAAATACAAGGATCCCGTCTACCAAGTTTGGCGTCAAAACACCTTCTGAAAAAATTTTAAAAAAT
391 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
*
17140784 CCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
456 CCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
*
17140849 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
521 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
* * * * *
17140914 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTACGTATACGGTCTCT
586 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * ** *
17140979 C-GGCCGGCGTAGTGCCCGCCCG-T---CTGTTCGCCCGCTCGTTTCGTTGGTTGGCTTAGGCAT
651 CTGGCCGACGTAGTGCCCGCCCGCTCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
* * * *** * * *
17141039 ACGGAGTTCATTCCCAGTTTCAGATCAGACCAGATCGAGGGTTGCAGCAGCAGGATTGGCAGCAT
716 ACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTATGGTAGCAGGA-TGACAGCAC
* * * * * * *
17141104 GCAGAAGGAGGACCCGACCGATCCTCGACTTGCGCATCCTGCCCCTCTGTCCGACTGAGCATCCG
780 GCAG-AGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCG
*
17141169 CACGCTCGTTTC------A--T-GG---GTTGA---C-TT--AG----
844 CACGCTCGTTTCGTGGTTACTTAGGCATATTGAGTTCATTCCAGTTAA
* *
17141195 GCATACGGAGTTCATTCCCAATTTAAGATCGGA-TAGGACCGAGGGTTTCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACTA-GACCGAGGGTTGCGGCAGCACATGCTGG
** **
17141259 GCTCAAGCATGTGTTGGTGCCGCATTTTTCTTTATCGGGGCACCATCTCTGGGGCATCGTCGGAG
65 GCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCCT-GGGG---CA---C-----CATCGTCGGAG
* * * * * *
17141324 AACCTGACCGACGGCATTGGGGTTTCGACAATCGGGGGGGCCGGGGGGCTTATGCGCACATGGTG
118 AACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGG-GTGTGCGCACATGATG
* * *
17141389 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAATCTCGACAACTC
182 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
17141454 ACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGTTGCTAGTAGCCATTAAAGTGTCTGAA
247 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
17141519 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTT
312 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
** * *
17141584 TGTGCATGCCACCAAAAATACAAGGATCACCTATACCAAG-TTGGGGCCAAAACTCCTTCCGAAA
377 TGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * *
17141648 AAATTTTAAAAAATCTCGAGCCGTAAAAAGTTTCAGAAATCGTGAAAAATAGAAAACGAGTCGTC
442 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* *
17141713 TGGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
507 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
17141778 CATTGGCACGTAGAAATATGAAGATGTGCCTAAACCTACCTACCACCCTATCGATCCACAGCTTG
572 CATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
17141843 CGCATCCCGTTTCTCTGGTCGACGTAGT--------GCT----CGCCCGCCCGCTCGTTTCGTCG
637 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCTCGCCCGCCCGCCCGCTCGTTTCGTCG
* * * * * *
17141896 GTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTTTGCTAGA
702 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTATGGTAGC
* * * * *
17141961 AGGATCTG-CAGCACACAGAGGGGGACCC-AGTCGATCCCCGACTTGCACATCCTGCCCCTCTGG
767 AGGA--TGACAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * * * **
17142024 CCGACTGAGCGCCCGTACGCACGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCAGTGTA
829 CCGGCTGAGCACCCGCACGCTCGTTTCGT-GGTT-ACTTAGGCATATTGAGTTCATTCCAGT-TA
17142089 A
891 A
* * ** ** *
17142090 GCATACAGAGTTCATTCCCAATCTAAGATCAGACCGGAATGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
17142155 CTCGGGCATGTGCTGGTGCCACATTTTTTTTTGCC-GGGGCACCATCGTCGGAGCGTCGCCGGAG
66 CTCGGGCATGTGTTGGTGCCGCA-TTTTTCTT-CCTGGGGCACCA---T-----CGT---CGGAG
* * *
17142219 AACCTGACCG-CGGCATTGGGGTTCAGGCGATCGGGGGGGTCGGGGGGCTGTGCGCACATGATGT
118 AACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
**
17142283 GCGATGGGTGCTGGTACTTCACCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
183 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
17142348 CACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTACCAGTAGCCATTAAAGTGTTTGAAA
248 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
17142413 TGGGGACAATTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTT
313 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* *
17142478 GTGCATTCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
378 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * ** * * *
17142543 AA-TTTAAAAGAGTCCCAAACCGTAAAAAGTTTTGAAAATCATAAAAAATAGAAAACAAGTCATC
443 AATTTTAAAA-AATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* *
17142607 TTGCCATGAAACTTCACATGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGG
507 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * *
17142672 CATTGGCATGCAGGAATATGAAGATGTGTCTAAACCCACCTACCACCCTATCGATTCACGGCTTG
572 CATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * * *
17142737 CACATCCCGTCTCTCTGGTCGGCATA--G---ACAC-CT--CCCGCCCGTCCGCTCATTTCGTCG
637 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCTCGCCCGCCCGCCCGCTCGTTTCGTCG
* * * ** * *
17142794 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGATCAAATTGAGGGTTACGATAGC
702 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTATGGTAGC
* * * * * *
17142859 AGGATCAACAGCACGCAGAGGGGGACCCGACTGATCTCCAGCTTGCGCATCTCGCCCCTCTGGCT
767 AGGAT-GACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* *
17142924 GACTGAGCGCCCGCACGCTCGTTTCGT-G-------GG----TTGA---C-TT--AG----
831 GGCTGAGCACCCGCACGCTCGTTTCGTGGTTACTTAGGCATATTGAGTTCATTCCAGTTAA
* * *
17142963 GCATATGGAGTTCATTCCCAGTCTAAGATCGGA-TCAGACCGAGGGTTGTGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACT-AGACCGAGGGTTGCGGCAGCACATGCTGG
* * * *
17143027 ACTCGGGCATGTGCTGGTGCCACATTTTTCTTTGCC-GGGGCATCATCGTTGGAGCATCGTTGAA
65 GCTCGGGCATGTGTTGGTGCCGCATTTTTC-TT-CCTGGGGCACCATC------G--TCG--G-A
* * * *
17143091 GAACCTGACCGACGGCATTGGGGTTCCGACGATCGGAGGGGCCAGGGGGGGTGTTCACACATGAT
117 GAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGGTGTGCGCACATGAT
* *
17143156 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCCCTCATCAAACCTCCAGAACT
181 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
17143221 CAAACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGAGTCTGG
246 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* ** *
17143286 AATGGGGACGCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAATTGAATTGTT
311 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * *
17143351 TTGTGCATGCCAACAAAAATACAAGGATTACGGCTACCAAGTTTGGGGCCAAAACTCATTCTGAA
376 TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* **
17143416 AAAATTTTAAAAAATCTCGAACCGTAAAAAGTTAAAAAAATCATGAAAAATAGAAAACGAGTCGT
441 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
*
17143481 CTTGCCATGAAACTTCACGGGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
506 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
17143546 GCATTGGCA---AG--ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCTCGGCTG
571 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
17143606 GTGCATCCCGCCCCTCTGGCCG
636 GCGCATCCCGTCTCTCTGGCCG
17143628 GCTGAGCATC
Statistics
Matches: 3662, Mismatches: 438, Indels: 246
0.84 0.10 0.06
Matches are distributed among these distances:
865 3 0.00
866 85 0.02
867 4 0.00
869 1 0.00
870 128 0.03
871 87 0.02
872 11 0.00
873 103 0.03
874 29 0.01
875 377 0.10
876 7 0.00
878 276 0.08
879 243 0.07
880 3 0.00
881 5 0.00
882 1 0.00
884 7 0.00
887 2 0.00
888 4 0.00
889 1 0.00
890 2 0.00
891 82 0.02
892 63 0.02
893 237 0.06
894 244 0.07
895 458 0.13
896 161 0.04
898 147 0.04
899 4 0.00
901 3 0.00
902 133 0.04
903 9 0.00
904 130 0.04
905 332 0.09
906 2 0.00
907 11 0.00
908 264 0.07
909 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (891 bp):
GCATACGGAGTTCATTCCCAATCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGTTGGTGCCGCATTTTTCTTCCTGGGGCACCATCGTCGGAGAACCTGACCGACG
GCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
CCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
CTGGCCGACGTAGTGCCCGCCCGCTCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
ACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTATGGTAGCAGGATGACAGCACG
CAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCA
CGCTCGTTTCGTGGTTACTTAGGCATATTGAGTTCATTCCAGTTAA
Found at i:17143701 original size:26 final size:26
Alignment explanation
Indices: 17143663--17143716 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
17143653 TGGGTTGACT
*
17143663 TAGGCATACGGAGTTCATTCCCAGTC
1 TAGGCATACGGAGTTCATTCCCAATC
*
17143689 TAGGCATATGGAGTTCATTCCCAATC
1 TAGGCATACGGAGTTCATTCCCAATC
17143715 TA
1 TA
17143717 AGATCGGAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.24, G:0.20, T:0.30
Consensus pattern (26 bp):
TAGGCATACGGAGTTCATTCCCAATC
Found at i:17144031 original size:26 final size:26
Alignment explanation
Indices: 17143991--17144048 Score: 82
Period size: 26 Copynumber: 2.2 Consensus size: 26
17143981 CGTGGGTTGA
*
17143991 CTAAGGCATATGGAGTTCATTCGC-AGT
1 CTAA-GCATACGGAGTTCATTC-CTAGT
17144018 CTAAGCATACGGAGTTCATTCCTAGT
1 CTAAGCATACGGAGTTCATTCCTAGT
17144044 CTAAG
1 CTAAG
17144049 ATCAGATTGG
Statistics
Matches: 29, Mismatches: 1, Indels: 3
0.88 0.03 0.09
Matches are distributed among these distances:
25 1 0.03
26 24 0.83
27 4 0.14
ACGTcount: A:0.28, C:0.21, G:0.22, T:0.29
Consensus pattern (26 bp):
CTAAGCATACGGAGTTCATTCCTAGT
Found at i:17144931 original size:26 final size:26
Alignment explanation
Indices: 17144895--17144947 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17144885 GTTGACTTAG
17144895 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17144921 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17144947 G
1 G
17144948 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17145841 original size:26 final size:26
Alignment explanation
Indices: 17145805--17145856 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
17145795 TTGACTTAGA
*
17145805 CATACAGAGTTCATTCCTAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
*
17145831 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
17145857 ATCGGGCATG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.25, G:0.17, T:0.29
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAGTCTAAG
Found at i:17146703 original size:25 final size:26
Alignment explanation
Indices: 17146668--17146719 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
17146658 GTTGACTTAG
* *
17146668 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCACTCTAA
17146694 GCATA-GGAGTTCATTCCCACTCTAA
1 GCATACGGAGTTCATTCCCACTCTAA
17146719 G
1 G
17146720 ATCGAATCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 19 0.79
26 5 0.21
ACGTcount: A:0.27, C:0.25, G:0.19, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCACTCTAA
Found at i:17147798 original size:26 final size:26
Alignment explanation
Indices: 17147769--17147819 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
17147759 GGTTCGATCG
*
17147769 TAGACTGGGAATGAACTTTGTATGCT
1 TAGACTGGGAATGAACTCTGTATGCT
17147795 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCTGTATGC
17147820 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.14, G:0.27, T:0.31
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCTGTATGCT
Found at i:17148708 original size:26 final size:26
Alignment explanation
Indices: 17148668--17148720 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17148658 CTGGTCTGAT
*
17148668 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
*
17148694 CTTAGACTGGCAATGAACTTCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
17148720 C
1 C
17148721 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:17149421 original size:896 final size:893
Alignment explanation
Indices: 17147391--17149679 Score: 3325
Period size: 897 Copynumber: 2.6 Consensus size: 893
17147381 TTCGTCAGTT
* *
17147391 ATCCTTGTATTTTTTTTGACATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTT
1 ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* * *
17147456 GTGAACATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCCGCAAACCTGTAA
66 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* *
17147521 AATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCAAATAT
131 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCAAATAT
*
17147586 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGTCCCCCCGATCGTCG
196 AAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCG
* * *
17147651 AAACCCTAATGCCGTCGGTCAGGTTCTC----TG---GCGATGGTGCCCCGACGAAGAAAAATAC
260 GAACCCCAATGCCGCCGGTCAGGTTCTCGTGATGCCTGCGATGGTGCCCCGACGAAGAAAAATAC
* * * * * *
17147709 GACAGCAACACATGCCCGAGCCTAGCATGTGCTGTCACAACCCTCAGTTTGGT-TCGATCGTAGA
325 G-CACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCT-GATCTTAGA
*
17147773 CTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAAC-TCTGTATGCCTAAGTCAACCCACGAA
388 CTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCACGAA
* * *
17147837 ACGAGCGGGTG-GGTGCTCAGCCGGCCAGCGGGGAGGGATACGCAAGCCGGGGATCGATCGGGTC
452 ACGAGC--GTGCGGTGCTCAG-CGGCCAGAGGGGAGGGATGCGCAAGCCGGGGATCGACCGGGTC
* * * * * *** *
17147901 CTCCTTCTGCGTACTGCCAATCCTACTGCCGTAACCCTCGATCCGGTCTGCTCTTAGACTGGGAA
514 CTCCCTCTGCATACTACCAATCCTACTACCGCAACCCTCGATCCGGTCCAATCTTAGACTAGGAA
** *
17147966 TGAACTCCGTATGCCTAAACCAACTGACGAAACAAGCGGGGGGTGGGCAGGCGGGCACAACACCG
579 TGAACTCCGTATGCCTAAACCAACCAACGAAACAA--GGGGGGCGGGCAGGCGGGCACAACACCG
** * * * * * *
17148031 GTTAGAGAGACGGGATGTGCAAGCCTTGGATCGATATGGTGGTAGGTGGGTTTAGGTACATCTTG
642 GCCAGAGAGACGGGATGCGCAAGCCTTAGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTC
* *
17148096 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
707 ATATTTCTACATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
*
17148161 ACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGTT
772 ACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACATTTTACGTT
*
17148226 TCAAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTCGCCCCAATCTTGGTAAATGTC
837 TCAAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTCACCCCAATCTTGGTAAATGTC
*
17148283 ATTCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
1 ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* * * *
17148348 GTAACTATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACTTGTAA
66 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* *
17148413 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCAAGGTTTGATGAGGGATA-GGGGCCAATAT
131 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCAAATAT
*
17148477 AAGGGCCAAGTACTAGCACCCATCGCATATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGG
196 AAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGG
*
17148542 AACCCCAATGCCGCCGGTCAGGTTCTACGGTGATGCCCTAGCGTTGGTGCCCCGACGAAGAAAAA
261 AACCCCAATGCCGCCGGTCAGGTTCT-C-GTGATG-CCT-GCGATGGTGCCCCGACGAAGAAAAA
* * * *
17148607 TGCAGCACCAACACTTGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTA
322 TAC-GCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTA
* *
17148672 GACTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTTCGTATGCCTAAGTCAACCCCACG
386 GACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAA-CCCACG
**
17148737 AAATAAGCGTGCAGGTGCTCAGCAGGCCAGAGGGGAGGGATGCGCAAGCCGGGGATCTG-CCGGG
450 AAACGAGCGTGC-GGTGCTCAGC-GGCCAGAGGGGAGGGATGCGCAAGCCGGGGATC-GACCGGG
* * * * * *
17148801 TCC-CCCTCTGCATGCTACCGATCCTGCTACCGCAGCCCTCGGTCTGGTCCAATCTTAGACTAGG
512 TCCTCCCTCTGCATACTACCAATCCTACTACCGCAACCCTCGATCCGGTCCAATCTTAGACTAGG
* * * * **
17148865 AATGAACTCCGTATGCCTAAGCCAACCAACGAAACAA-GTGGGCGGGCGGGCGGGCACTACGTCG
577 AATGAACTCCGTATGCCTAAACCAACCAACGAAACAAGGGGGGCGGGCAGGCGGGCACAACACCG
*
17148929 GCCAGAGAGATGGGATGCGCAAGCCTTAGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTC
642 GCCAGAGAGACGGGATGCGCAAGCCTTAGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTC
*
17148994 ATATTTCTACGTGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
707 ATATTTCTACATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* *
17149059 ACGTGAAGTTTAATGGCAAGATGACTCGTTTTCTATTTTTCA-TATTTTCAAAACATTTTACGTT
772 ACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACATTTTACGTT
**
17149123 TCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTCACCCCAATCTTGGTAAATGTC
837 TCAAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTCACCCCAATCTTGGTAAATGTC
* *
17149180 ATCCTTGTATTTTTGTTGGCATGCAC-CAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
1 ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
17149244 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAC
66 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* *
17149309 AATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTCAAGGTTTGATGAGGGATAGGGGGCTAATAT
131 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCAAATAT
* *
17149374 AAGGGCCAAGTACTGGCA-CCATCGCACATCATGTGCGCACACCCCCCGGGCCCCCCGATCGTCA
196 AAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCGATCGTCG
* *
17149438 GAACCCCAATGTCGCCGGTCAGGTTCTCCGATGATGCTCTGGCGATGGCGCCCCGACGAAGAAAA
260 GAACCCCAATGCCGCCGGTCAGGTTCT-CG-TGATGC-CT-GCGATGGTGCCCCGACGAAGAAAA
* * **
17149503 ATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGATCTGATCAAATCTT
321 ATAC-GCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTT
* * * *
17149568 AGACTGGGAATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAATTCAACCCATG
385 AGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACG
* *
17149633 AAACGAGCGTGCGGATGCTCAGCCGCCAAGAGGGGTGGGATGCGCAA
450 AAACGAGCGTGCGG-TGCTCAGCGGCC-AGAGGGGAGGGATGCGCAA
17149680 ATCTTAGACT
Statistics
Matches: 1253, Mismatches: 119, Indels: 46
0.88 0.08 0.03
Matches are distributed among these distances:
890 38 0.03
891 59 0.05
892 170 0.14
895 5 0.00
896 220 0.18
897 306 0.24
898 180 0.14
900 3 0.00
901 208 0.17
902 63 0.05
903 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (893 bp):
ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCAAATAT
AAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGG
AACCCCAATGCCGCCGGTCAGGTTCTCGTGATGCCTGCGATGGTGCCCCGACGAAGAAAAATACG
CACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTG
GGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGA
GCGTGCGGTGCTCAGCGGCCAGAGGGGAGGGATGCGCAAGCCGGGGATCGACCGGGTCCTCCCTC
TGCATACTACCAATCCTACTACCGCAACCCTCGATCCGGTCCAATCTTAGACTAGGAATGAACTC
CGTATGCCTAAACCAACCAACGAAACAAGGGGGGCGGGCAGGCGGGCACAACACCGGCCAGAGAG
ACGGGATGCGCAAGCCTTAGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTA
CATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
TTAATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACATTTTACGTTTCAAGATTT
TTTAAAATTTTTTTGGAAGGAGTTTTCACCCCAATCTTGGTAAATGTC
Found at i:17149594 original size:26 final size:26
Alignment explanation
Indices: 17149565--17149617 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17149555 CTGATCAAAT
*
17149565 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
17149591 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
17149617 C
1 C
17149618 CTAATTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:17151303 original size:26 final size:26
Alignment explanation
Indices: 17151267--17151319 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17151257 CTGGTTCGAT
*
17151267 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
17151293 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
17151319 C
1 C
17151320 CTAACTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:17153093 original size:26 final size:26
Alignment explanation
Indices: 17153064--17153113 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
17153054 GTCCAATCTT
*
17153064 AGACTGGGAATGAACTCCATATGCTC
1 AGACTAGGAATGAACTCCATATGCTC
*
17153090 AGACTAGGAATGAACTCCGTATGC
1 AGACTAGGAATGAACTCCATATGC
17153114 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.22, G:0.24, T:0.22
Consensus pattern (26 bp):
AGACTAGGAATGAACTCCATATGCTC
Done.