Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 85 of 190
Found at i:13641986 original size:26 final size:26
Alignment explanation
Indices: 13641950--13642002 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13641940 TCGGTTCGAT
13641950 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
13641976 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13642002 C
1 C
13642003 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13642308 original size:903 final size:895
Alignment explanation
Indices: 13639579--13645387 Score: 7013
Period size: 903 Copynumber: 6.6 Consensus size: 895
13639569 CGGGTGGACG
* * *
13639579 GGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTTAATTCAT
1 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* *
13639644 ACAATGGTCCATTAAGCC-TCACGTGAAGTTTCATGGC-AGATGACTCGTTTTTCTATTTTTCAC
66 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG-TTTTCTATTTTTCAC
* * ** *
13639707 GA-TTTTCAAACTTTTTACGGTT-TGGATTTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCCA
130 GATTTTTAAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* * * * * * *
13639770 AACTTGATAGGCGTGATCTTTATATTTCTGTTCGCATGCAAAAAAAAATTCAGCTGAAAACTCGA
194 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGA
* * *
13639835 AGTGTATAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACATTTTAATGGCTATTG
259 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
*
13639899 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGTG
324 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
**
13639964 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCA-ATCATGTGCGCACACCCCCTCG
389 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCC-CG
* ** *
13640028 GCCCCCCCGATTGTCGGAACCCCAATGCCACCGGTCAGGGTTCTCCGGCGATAGCTCCGACGACT
453 G-CCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCA-GGTTCTCCGGCGAT-GCTCCGGCGA-T
* *
13640093 GGTGGCCGCCG-CTGAAGAAAAATGCCGACACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGC
514 GGT-GCC-CCGAC-GAAGAAAAATG-CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * * *
13640157 AACCCTTGTCTGTCCGATCTTA-ACTGGAAATGAACT-TGTATGCTTAGACT-GGAATGAACTTC
575 AACCCTCGTCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC-TC
* *
13640219 CGTATGCCTAAGTCAACCCACGAAATGAGCGT---GGCGGTCAGCCGCCAGAGGGGCGGGATGC-
639 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGCCAGAGGGGCGGGATGCG
* * * * *
13640280 CAAG-CGGGGATCGGCCGGT-CCCCT-T--GTGCTGCGATCTTG--ACTGCAA-CCTCGTCCAGT
704 CAAGCCGGGGATCGGCGGGTCCCCCTCTGCGTGCTGCGATCCTGCTACCGCAACCCTAGTCCGGT
*
13640337 CCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC-A-CGACGAAACG-GCG-GCGGCGG
769 CC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAACGGC-G
* *
13640398 GTGGGGGCGGGCCACTAACGTCGGCCAGAAGAGACGGGATGCGCAAGCCGTGGATCGATA-GGTG
832 G-GCGGGCGGG-CACT-ACGCCGGCCAG-AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
13640462 GTA
893 GTA
*
13640465 GGTGGG-TTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGG-TTGTAAATTCAT
1 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * *
13640528 GCAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCAGGACGAATCGTTTTCTATTTTTCACG
66 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
** ** * *
13640593 ATTTTCGAAACTTTTTACGGTTCCAGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCACCAAA
131 ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * *
13640658 CTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAG
196 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAG
* *
13640723 TGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAAACACTTTAATGGCTACTGGC
261 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
*
13640788 AACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
326 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
13640853 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCACCCCGGC
391 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACC-CCCCGGC
*
13640918 CCCTCGATCGTCGGAACCCCAATG-TCGCCGGTCAGGTTCT-C--CGA--------CGATGGTGC
455 CCCCCGATCGTCGGAACCCCAATGCT-GCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGC
* * * *
13640971 CCCGACGAAGAAAAATGTGACACCAGCACATGCCTGAGCCCAGCATGTGCTGCGGCAACCCTCAG
519 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-G
* * * *
13641036 TCCGATCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGATCTCCGTATGCC
583 TCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* *
13641101 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCACAAGCCG
647 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGCCAGAGGGGCGGGATGCGCAAGCCG
* * * * * *
13641166 GGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCTTGTTGCCGCAACCCTTGGTCCGGTCTGA
711 GGGATCGG-CGGGTCCCCCTCTGCGTGCTG-CGATCCTGCTACCGCAACCC-TAGTCCGGTCCGA
* * *
13641231 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCGGACGGACGAGCGG
773 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAACGG-CGGGCGG
* *
13641296 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATATGGTGGTA
837 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* *
13641355 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAGTTTTATGGCTTGTAAATTCAT
1 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* *
13641420 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACTCGTTTTCTATTTTTCATG
66 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* * * * *
13641485 ATTTTTGAAACTTTTTGCTGTTCGGGATTTTTTAAAATTTTTTCAGAAGGTGTTTTGGCCCCAAA
131 ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
*
13641550 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAGAAACTCGAAG
196 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAG
13641615 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
261 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
13641680 AGCAAACCTATAAAATCTCAAATGCTCCTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGAT
326 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * * * *
13641745 AAGGGGCCAATATAAGGGTCAAGTACCAGCACCCCTCACTCATTATGTGCGCACACCCCCCTGGC
391 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCC-GGC
* * ** *
13641810 CCCCCGATCGTCGAAACCCCAATGCTGCCGGTTAGGTTCTCCAACGATGCTTCGGCGATGGTGCC
455 CCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCC
* * **
13641875 CCGACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCCACCGCAACCCTCGGT
520 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-G-
*
13641940 TCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCT
583 TCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
13642005 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGCCCAGAGGGGTGGGATGCGTAAGTCGG
648 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG-CCAGAGGGGCGGGATGCGCAAGCCGG
* * *
13642070 GGATCAGTCGGGTCCCCCTTTGCGTGCTGTCAATCCTGCTACCGCAACCCTTAGTCCGGTCCGAT
712 GGATC-GGCGGGTCCCCCTCTGCGTGCTG-CGATCCTGCTACCGCAACCC-TAGTCCGGTCCGAT
* *
13642135 CTTAGACTTGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAACGAGCGAACGGACGGGCGGG
774 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAACGG-CGGGCGGG
* ** * * **
13642200 CGGGCACTACGCCCGTTAGAGAGATGGGATGCGCAAGCCGTGGATCAATAGGGTAATA
838 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*
13642258 GGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
1 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* *
13642323 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTTTTTTTCACG
66 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* * * *
13642388 ATTTTTAAAACTTTTTACGATTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGTCCCCAAA
131 ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * * * *
13642453 CTTGGTAGAGGAGATCCTTGTATTTTTGTTGGCATGCATAAAAACATTCAGCTAAAAACCCAAAG
196 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAG
*
13642518 TGTACAAGATTTTGTGACCATTTGAAAAAA-TGTCCCCA-TTCAGACACTTTAATGGATACTGGC
261 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
13642581 AGCAAACCTTTAAAAGTCTCAAATGCCACTTTAA-GGGTTGTGAGTTCTCGAGGTTTGATGA-GG
326 AGCAAACCTGTAAAA-TCTCAAATG-CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
*
13642644 -T--GGGGCCAATATAAAGGCCAAGTACCAGCACCCATC-CACATCATGTGCG-ACA-CCCCC-G
389 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG
* * * * **
13642702 CCCCCAGATCATC-GAACCCCAATGCAT-CGGGTCAGGTTCTCCGAC-ATG-T-CTTC-ATGGTG
454 CCCCCCGATCGTCGGAACCCCAATGC-TGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTG
* * *
13642761 -CCCGA-G-A-AAAAAT--GGCACCAGC-CATGCCCGAGCCCAGAATGTGCT---GCAAGCC-GG
518 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
* * *
13642815 TCCTGG-TCTGATTTTAGACT-GGAGATG-ACTCC--AT-TTTA-A-T--GAATG---TTC-TA-
583 T-C-GGTTC-GATCTTAGACTGGGA-ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * *
13642865 -CC--A--CAAACCACG-AA--A-CGT----GCG-T-TG--G-C-----GGC--CA---GCAAG-
644 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGCCAGAGGGGCGGGATGCGCAAGC
* * * * *
13642901 CTGGGATCGGCCGGGT--CCCTCTGCATGCT-CCAT--TGCTGA--GCAA-CCT-CT-CGG-CCA
709 CGGGGATCGG-CGGGTCCCCCTCTGCGTGCTGCGATCCTGCT-ACCGCAACCCTAGTCCGGTCCG
* * * * ** *
13642955 ATCTTAGACTGGGAATGAACTCTGTATGCTTAAGCCAATCGACGGAACGAGCGGGCTGGTGGGCG
772 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAAC-GGCGGGCG
* * *
13643020 GGCGGGCATTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGTTGGTA
836 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*
13643080 GGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
1 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* *
13643145 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACG
66 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* * ** *
13643210 ATTTTCAAAACATTTTACGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTCTTGGCCCCAAA
131 ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * * *
13643275 TTTGGTAGACATGATCCTTTTTTTTTTGTTGGCATGC-ACAAAAAATTCAGCTAAAAAC-CGAAA
196 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCG-AA
* * *
13643338 GTGTACAAGATTTTGTGACAATTTTAAAAAAGTGTCCCCATTTCAGAGACTTTAATGGCTACTGG
260 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
*
13643403 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-GAGGTTTCATGAGGGA
325 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* * *
13643467 TAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCATCGCATATCATGTGCGCACACCCTCCGGC
390 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGC
* * * * * **
13643531 CCCCTGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCAATGCTCCGATGATGGTGCC
455 CCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCC
** *
13643596 CCGATTAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGTT
520 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-T
* * *
13643661 CGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTA
584 CGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * * *
13643726 AGTCAGCCCATGAAATGAGCATGCGGGCGCACAGTCGGCCAGAGGGGCGAGATGCGCAAGCCGGG
649 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * * *
13643791 GATCGGCTGGGTCCCCCTCTGCGTGCTGCTGATCCTACTACCACAACCCTCAATCTGATCTGATC
713 GATCGGC-GGGTCCCCCTCTGCGTGCTGC-GATCCTGCTACCGCAACCCT-AGTCCGGTCCGATC
* *
13643856 TTAGACTGGGAATGAACTCCGCATGCCTAAGCCATCCGACG-AA--A-CG-A------GCGGGCG
775 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAACGGCGGGCGGGCG
* * * *
13643910 GGCACTACGTCGGCCAGAGAGATGGGATGCACAAGCCGTGGATCGATAGGATGGTA
840 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* *
13643966 GGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATACCATTTTTATGGCTTGTAAATTCAT
1 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * * *
13644031 ACAATGGTCCCTTAAGCCTTCACGTGAACTTTCATGGCGAGACGACTCATTTTCCATTTTTCATG
66 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* *
13644096 ATTTTTGAAACTTTTTACGGTTCGGGA--TTTTAAAATTTTTTCAGAAGGAGTTTTTGGCCCCAA
131 ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG-TTTTGGCCCCAA
* * * *
13644159 ACTTGGTAGACATGATACTTGTTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
195 ACTTGGTAGACGTGATCCTTG-TATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGA
*
13644224 AGTGTACAAGATTTTGTGACCATTGGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
259 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
*
13644289 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
324 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
13644354 ATAGGTGGCCAATATGAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCC-G
389 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG
* * * * *
13644418 CCCCCTCGACCATCGGAACCCTAATG-TCGCCGGTCAGGTTCTCTGGTGATGCT-C--C------
454 CCCCC-CGATCGTCGGAACCCCAATGCT-GCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGT
* *
13644473 G----G-CGAAGAAAAATGCGGCACCAGCACACGCCCGAGCCCAGTATGTGCTG-CGCAA-CC-C
517 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
*
13644530 -TC-G---GA-C-----C---G---G---TCC-AAT-CTTA-ACTGGGAATGAACTCCGTATGCC
582 GTCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * ** * *
13644572 TAAGTCAACCCACGAAACGAGCGTTCGGGCACTCAGTCAACCAGAGGGGCGGGATGGGTAAGCCG
647 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGCCAGAGGGGCGGGATGCGCAAGCCG
* * * * * * *
13644637 GGGATCGGTAGGGACCCCCTCTGCGAGCTGCCGATCCTGCTGCCACAACCCTCGATCAGGTCCGA
711 GGGATCGG-CGGGTCCCCCTCTGCGTGCTG-CGATCCTGCTACCGCAACCCTAG-TCCGGTCCGA
* * * * * *
13644702 TCTTAGA-TTGGAATGAACTCCGTATGCCTAATCCAAGCGACGAAACGAAAGGGCA-GGCAGGCG
773 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG--AGCGAACGGCGGGCG
*
13644765 GGCGGGCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
836 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* *
13644825 GGTGGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
1 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * *
13644890 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAGGACGACTCATTTTCTATTTTTCATG
66 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* *
13644955 ATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
131 ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * * * *
13645020 CTTGGTAGACATGATCCTTGTATTTTTTTTGGCGTGCACAAAAACATTCACCTAAAAACTCGAAG
196 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAG
* * *
13645085 TGTACAAGATTTTGTGACCA-TTCAAAAAAGTGTCCCCATTTCAGACAATTTAATGGCTACTAGC
261 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
*
13645149 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAGGGAT
326 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * * *
13645214 AGGGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACATCATTTGCGCACACTCCCCGGCC
391 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG-C
* * * * * * *
13645279 CCCCCGGTCGCCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCG
455 CCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCC
* * ** * *
13645344 CCGATGAAGAAAATTGTAGCACCAGCACTTGCCCGACCCCAGCA
520 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
13645388 CATGCCAATG
Statistics
Matches: 4300, Mismatches: 428, Indels: 403
0.84 0.08 0.08
Matches are distributed among these distances:
820 1 0.00
821 67 0.02
822 352 0.08
823 43 0.01
824 6 0.00
825 41 0.01
826 5 0.00
827 8 0.00
828 16 0.00
829 27 0.01
830 6 0.00
831 1 0.00
832 12 0.00
833 7 0.00
834 17 0.00
835 4 0.00
836 1 0.00
837 6 0.00
838 1 0.00
839 9 0.00
840 24 0.01
843 20 0.00
844 11 0.00
845 2 0.00
846 2 0.00
847 34 0.01
848 136 0.03
849 7 0.00
850 3 0.00
851 11 0.00
852 1 0.00
853 1 0.00
854 4 0.00
855 5 0.00
856 1 0.00
857 3 0.00
858 160 0.04
859 313 0.07
860 39 0.01
861 29 0.01
862 3 0.00
863 2 0.00
864 1 0.00
865 5 0.00
866 4 0.00
868 1 0.00
869 9 0.00
870 45 0.01
871 21 0.00
872 14 0.00
873 54 0.01
874 57 0.01
875 53 0.01
876 13 0.00
877 23 0.01
878 25 0.01
879 4 0.00
880 14 0.00
881 25 0.01
882 14 0.00
883 4 0.00
884 54 0.01
885 121 0.03
886 388 0.09
887 303 0.07
888 96 0.02
889 138 0.03
890 35 0.01
891 64 0.01
892 444 0.10
893 22 0.01
894 6 0.00
895 9 0.00
896 4 0.00
897 14 0.00
898 72 0.02
900 1 0.00
901 40 0.01
902 44 0.01
903 612 0.14
904 6 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAG
TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCC
CCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCC
CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCG
GTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
CGGCGGGTCCCCCTCTGCGTGCTGCGATCCTGCTACCGCAACCCTAGTCCGGTCCGATCTTAGAC
TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAACGGCGGGCGGGCGGGCACT
ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
Found at i:13643708 original size:26 final size:26
Alignment explanation
Indices: 13643670--13643722 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13643660 TCGGTCCAAT
*
13643670 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13643696 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13643722 C
1 C
13643723 CTAAGTCAGC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:13645971 original size:26 final size:26
Alignment explanation
Indices: 13645942--13645994 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13645932 ATGGTCTGAT
13645942 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
*
13645968 CTTAGACTGGGAGTGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
13645994 C
1 C
13645995 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.17, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:13650931 original size:26 final size:26
Alignment explanation
Indices: 13650902--13650957 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
13650892 CCAGTCCGAT
13650902 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
13650928 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13650954 CTTA
1 CTTA
13650958 TGTCAACCGA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.29, C:0.20, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:13651829 original size:26 final size:26
Alignment explanation
Indices: 13651800--13651855 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
13651790 CCAGTCCGAT
13651800 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
13651826 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13651852 CTTA
1 CTTA
13651856 TGTCAACCGA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.29, C:0.20, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:13651991 original size:898 final size:896
Alignment explanation
Indices: 13650034--13655108 Score: 6537
Period size: 898 Copynumber: 5.7 Consensus size: 896
13650024 CTGGTCTGAT
* * * *
13650034 CTTAGACTAGGAAAGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGTGCTCAAC
1 CTTAGACTAGGAATGAACTCCGTATGCTTAAGTCAA-CCACGAAACGAGCATGCGGGTGCTCAAC
* * * * ** * * *
13650099 TGGCCAGAGGAGCGGGATGCGTAAGTCGGGGATCGATCGAGTCCCCCACTGCGTGCTGCCGATCC
65 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCG-GTCCCCCTCTACGTGCTACCGATCC
* * ** * *
13650164 TGCTACTGCAACCCTCGATCTGG-CCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCA
129 TACTGCCACAACCCTCGGTCTGGTCC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * * * * * * *
13650228 TTCGACGAAACAAGC-GGGC-GGGCGTGCGGGCACTACGCCGGCCAGAGAGA-TGGATGCACATG
193 ACCGACAAAACGAGCGGGGCGGGGCGGGCTGGCACTACGTCGACCAGAGAGACGGGATGCGCAAG
* * * *
13650290 TCGTGGATCGATAGGGTGGTAGGTAGGTTTAGGGACATCTTCATATTTCTGCATGCCAATGCCAT
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
*
13650355 TTTTATGGCTTGTAAATTCATACAATGCTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
323 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* ** * **
13650420 ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTCCAAGATTTTTTAAAATTTTTTC
388 ACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
* * *
13650485 AGAA-AATTTTTTAGCCCCAAACTTGGTAGACGTGATGCTTGTATTTTTGTTGGCATGCACAAAA
453 AGAAGAA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* ** * * *
13650549 AAATTTAGGAAAAAAATCGAAGTGTACAAGATTCTGTGACCATTTGAAAATAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
13650614 AGACACTTTAATGGCTATTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
13650679 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * **
13650744 CATGTGC-CACCCCCCGGCCCCCCGATCGTCAGAACCCGAATACCGTCGGTCAGGTTCTCCAATG
712 CATGTGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCTCCAACA
* * * * *
13650808 ATGCTCCGGCGATGGTGCCTCGGTGAAGAAAAATACGGCACCAACACATGCTCGAGCCCAGCATG
777 ATGCTCCGACGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
13650873 TGCTGCCGCAACCCTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
842 TGCTGCCGCAACCCTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
* * *
13650928 CTTAGACTGGGAATGAACTCCGTATGCTTATGTCAACCGACGAAATGAGCATGCGGGTGCTCAAC
1 CTTAGACTAGGAATGAACTCCGTATGCTTAAGTCAACC-ACGAAACGAGCATGCGGGTGCTCAAC
* * * *
13650993 CGGCCAGAGAGGCGGGATGTGCAAGCCGGGGATAGGCCAGGTCCCCCTCTACGTGCTATCGATCC
65 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCC-GGTCCCCCTCTACGTGCTACCGATCC
* ** *
13651058 TACTGCCACAACCTTAAGTCTGGTCCGATCTGAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
129 TACTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
13651123 CCGACAAAACGAGCGGGTGCGTGGGCGGGCTGGCACTACGTCGACCAGAGAGATGGTA-GCGCAA
194 CCGACAAAACGAGCGGG-GCG-GGGCGGGCTGGCACTACGTCGACCAGAGAGACGGGATGCGCAA
* *
13651187 GCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
13651252 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * *
13651317 GACTCATTTTCTATTTTTCACGATATTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
387 GACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * *
13651382 CAGAAGCAGTTTTGGCCCCAAAATTGGTAGACATGATCCATT-TGTTTTTGTTGGCATGCACAAA
452 CAGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCACAAA
** * *
13651446 AAAATTCAGCTAAAAACTATAAGTGTACAAGATTTTGTCATCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
13651511 TAGACACTTTAACGGCTACTGGCAGCAAACCCGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
13651576 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
646 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* **
13651641 TCATGTGC-CACCCCCCGGCCCCCCGATCGTCAGAACCTGAATACCGTCGGTCAGGTTCTCCAAC
711 TCATGTGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCTCCAAC
* * * *
13651705 AATGCTCCGGCGATGGTGCCTCGATGAAGAAAAATACGGCACCAACACATGCTCGAGCCCAGCAT
776 AATGCTCCGACGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* *
13651770 GTGCTACCGCAACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
841 GTGCTGCCGCAACCCTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
* * *
13651826 CTTAGACTGGGAATGAACTCCGTATGCTTATGTCAACCGACGAAATGAGCATGCGGGTGCTCAAC
1 CTTAGACTAGGAATGAACTCCGTATGCTTAAGTCAACC-ACGAAACGAGCATGCGGGTGCTCAAC
* * * *
13651891 CGGCCAGAGAGGCGGGATGTGCAAGCCGGGGATAGGCCAGGTCCCCCTCTACGTGCTATCGATCC
65 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCC-GGTCCCCCTCTACGTGCTACCGATCC
* ** *
13651956 TACTGCCACAACCTTAAGTCTGGTCCGATCTGAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
129 TACTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
13652021 CCGAAAAAACGAGCGGGTGGGTGGGCGGGCTGGCACTACGTCGACCAGAGAGATGGTA-GCGCAA
194 CCGACAAAACGAGCGGG-GCG-GGGCGGGCTGGCACTACGTCGACCAGAGAGACGGGATGCGCAA
* *
13652085 GCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
13652150 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
13652215 GACTCATTTTCTATTTTTCACGATATTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
387 GACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * *
13652280 CAGAAGCAGTTTTGGCCCCAAAATTGGTAGACATGATCCATT-TGTTTTTGTTGGCATGCACAAA
452 CAGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCACAAA
** * *
13652344 AAAATTCAGCTAAAAACTATAAGTGTACAAGATTTTGTCATCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
13652409 TAGACACTTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
13652474 GTTCTCAAGGTTTGATGAGGGATAGGGTGCCAATATAAGGGCCAAGTAGCAGCACCCATCGCACA
646 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
13652539 TCATGTGTGCACACCCCTCTGGCCCCCCCGATCG-CTGGAACCCCAATACCGTCGATAAAGTTCT
711 TCA--TGTGCACACCCC-CCGG-CCCCCCGATCGTC-GGAACCCCAATACCGTCGGTCAGGTTCT
*** ** *
13652603 CCAGTGATGCTCCGACGATGGTGCC-CGCCGAAGAAAAATGCGGCACCAGCAGATGCCCGAGCCC
771 CCAACAATGCTCCGACGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * *
13652667 AGCACGTGCTGCC-CTAACCCTCAGTCTAGTCCAATGTTAGACTGGGAATGAACTCCGTTTG
836 AGCATGTGCTGCCGC-AACCCTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
* * * * *
13652728 CTTAGACTAGGAATGAACTCTGTA-GGTCTAAGTCAACCCACGAAACGAGCGTGAGGGTGCTCAG
1 CTTAGACTAGGAATGAACTCCGTATGCT-TAAGTCAA-CCACGAAACGAGCATGCGGGTGCTCAA
* * * * *
13652792 CCAGCCAGAGGGGCGGGATGTGCAAGCCGAGGATCGGCCGAGTCCCCCTCTGCATGCTACCGATC
64 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCG-GTCCCCCTCTACGTGCTACCGATC
* * *
13652857 CTGCTGCCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGACA
128 CTACTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
13652922 ACCGACGAAACGAACGTGCGG-GCGGGTGGGCGGGCACTATGTCGGCCAGAGAGACGGGATGCGC
193 ACCGACAAAACGAGCG-G-GGCG-GGGCGGGCTGGCACTACGTCGACCAGAGAGACGGGATGCGC
* * *
13652986 AAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCAAATGC
255 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
* *
13653051 CATTTTTATGGCGTT-TAAATTCATACAATGGTCCGTTAAGCCTTCACGTGAAGTTTCTTGGCAA
320 CATTTTTATGGC-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * * * *
13653115 GACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTTCGGTGCGGGATTTTTCAAAAATT
384 GACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTT
* ** * *
13653180 TTTCGGAAGGTGTTTTTGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
449 TTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
** *
13653245 AAAAAATTCAGCTAAAAACTTTAAGTGTACAAGATTTTGTGACTATTTGAAAAAAGTG-CCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
13653309 TTCAGACAGTTTAATGGCTACTGGCAGCAAACATGTAAAA-CTCAAATACTCTTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
13653373 GAGTTCTCAAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATTGCA
644 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
13653438 CATCATGTGAGCACACCCCCCCGGCCCCCCAATCGTCGGAACCCCAATGCTGTCGGTTAGG---T
709 CATCATGT--GCACA-CCCCCCGGCCCCCCGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCT
* *
13653500 -------T-CTCCGACGATGGTG-CTCCGGTAAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
771 CCAACAATGCTCCGACGATGGTGCCT-CGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* ** * * *
13653556 CAGCATGTGCTGCTGCAACCCTCAGTCTGGTCCGATCATAGACTTGGAAAGAACTCCGTATG
835 CAGCATGTGCTGCCGCAACCCTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
* * * * * *
13653618 CTTAGACTGGGAATGAACTCCGTATGCCTAAATCAACTCACGAAACGAGCGTGCGGGCGCTGAAC
1 CTTAGACTAGGAATGAACTCCGTATGCTTAAGTCAAC-CACGAAACGAGCATGCGGGTGCTCAAC
* * * * * * *
13653683 TGGCCAGAGGGGTGGGATGCGCATGTCGGGGATTGGTCGGTTCCCCCTCTTCGTGCTACCGATCC
65 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGG-TCCCCCTCTACGTGCTACCGATCC
* **** * * *
13653748 TGCTGTTGTAACCCTCGGTCTGGTCCGATCATAGACTGGGAATGAACTCCATATGCCCAAGCCAA
129 TACTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
13653813 CCGACGAAACGA-----GC-GGAC--G--GGCACTACGTC-AGCCAGAGAGACGGGATGCGCAAG
194 CCGACAAAACGAGCGGGGCGGGGCGGGCTGGCACTACGTCGA-CCAGAGAGACGGGATGCGCAAG
* *
13653867 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAAAGCCAT
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
* * * *
13653932 TTTTATGGCTTGTAAATTCATACAATGCTCCCTTAAGACTTCACATGAAGTTTCATGGCAAGATG
323 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * *
13653997 ACTCATTTTTTATTTTTCATGATTTTTGAAACTTTTTGCGGGTCGGGGTTTTTTAAAATTTTTTC
388 ACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
*
13654062 -----AA-TTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
453 AGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
13654121 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
13654186 GACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
13654251 TCTCCAGGTTTGATGAAGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
13654316 ATGTGCGCACACCCCCCGGACCCCCCCGATCGTTGGAACCCCAATGCCGCCAGTTAGGTTCTCCG
713 ATGT--GCACACCCCCCGG--CCCCCCGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCTCCA
* * * *
13654381 GCAAAGCTCCGACGATGGCGCC-CTAGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
774 ACAATGCTCCGACGATGGTGCCTCGA-TGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * * *
13654445 CATGTGCTGCCACAACCCTCAGTTCGGTCCGATCTTAGACTGGGAATGAACTTCATATG
838 CATGTGCTGCCGCAACCCTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
* * *
13654504 CTTAG-CTAGGAATGAGCTTCGTA----T--G-------C----CTA--A-------G-TCAACC
1 CTTAGACTAGGAATGAACTCCGTATGCTTAAGTCAACCACGAAACGAGCATGCGGGTGCTCAACC
* * * * * *
13654541 GGCCAGAGGGGTGGGATGCGCAAGCCAGGGATCGACCGGGTCCCCCTCTACGTGTTGCCTATCCT
66 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCC-GGTCCCCCTCTACGTGCTACCGATCCT
* *** * * * * *
13654606 GCCATCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAAAGAACTTCGTATGCCTAAGCCAAC
130 ACTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * *
13654671 CGATGAAACAAAC-AGGCGGGCGAGCGGGCGGGCGGTCGGGCACTACGTTGGCTAGAGAGACGGG
195 C---GACA-AAACGA-GCGGG-GCG-GGGCGGGC--T--GGCACTACGTCGACCAGAGAGACGGG
* *
13654735 ATGCGTAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTACATGC
249 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGC
* **
13654800 CAATGCCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCGACACGTGAAGTTTCAT
314 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
*
13654865 GGCAAG-CTGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTA
379 GGCAAGAC-GACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTA
**
13654929 AAATTTTTTTGGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
443 AAATTTTTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
13654994 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
508 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
*
13655059 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTCTAAAATCTC
573 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
13655109 TATATGCTTA
Statistics
Matches: 3746, Mismatches: 350, Indels: 181
0.88 0.08 0.04
Matches are distributed among these distances:
857 111 0.03
858 3 0.00
860 3 0.00
861 4 0.00
867 3 0.00
869 3 0.00
871 2 0.00
872 105 0.03
873 51 0.01
874 98 0.03
875 32 0.01
877 211 0.06
878 205 0.05
880 1 0.00
881 1 0.00
882 4 0.00
883 160 0.04
885 16 0.00
886 105 0.03
887 1 0.00
888 1 0.00
889 16 0.00
890 258 0.07
891 2 0.00
893 2 0.00
894 167 0.04
895 5 0.00
896 2 0.00
897 1 0.00
898 1330 0.36
899 8 0.00
900 34 0.01
901 108 0.03
902 344 0.09
903 346 0.09
904 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (896 bp):
CTTAGACTAGGAATGAACTCCGTATGCTTAAGTCAACCACGAAACGAGCATGCGGGTGCTCAACC
GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGTCCCCCTCTACGTGCTACCGATCCTA
CTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACAAAACGAGCGGGGCGGGGCGGGCTGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGA
AGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCTCCAACAATGC
TCCGACGATGGTGCCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
GCCGCAACCCTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATG
Found at i:13653623 original size:26 final size:26
Alignment explanation
Indices: 13653594--13653644 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
13653584 GGTCCGATCA
*
13653594 TAGACTTGGAAAGAACTCCGTATGCT
1 TAGACTGGGAAAGAACTCCGTATGCT
*
13653620 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAAAGAACTCCGTATGC
13653645 CTAAATCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.20, G:0.25, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAAAGAACTCCGTATGCT
Found at i:13654516 original size:25 final size:26
Alignment explanation
Indices: 13654478--13654529 Score: 70
Period size: 25 Copynumber: 2.0 Consensus size: 26
13654468 TCGGTCCGAT
*
13654478 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTAGGAATGAACTTCATATG
* *
13654504 CTTAG-CTAGGAATGAGCTTCGTATG
1 CTTAGACTAGGAATGAACTTCATATG
13654529 C
1 C
13654530 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 1
0.85 0.11 0.04
Matches are distributed among these distances:
25 18 0.78
26 5 0.22
ACGTcount: A:0.27, C:0.17, G:0.25, T:0.31
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTTCATATG
Found at i:13655862 original size:26 final size:26
Alignment explanation
Indices: 13655833--13655884 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
13655823 CAATCCGATT
*
13655833 TTAGATTAGGAATGAACTCCGTATGC
1 TTAGACTAGGAATGAACTCCGTATGC
* *
13655859 TTAGACTGGGAATGAATTCCGTATGC
1 TTAGACTAGGAATGAACTCCGTATGC
13655885 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.15, G:0.25, T:0.31
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCGTATGC
Found at i:13656781 original size:26 final size:26
Alignment explanation
Indices: 13656742--13656797 Score: 76
Period size: 26 Copynumber: 2.2 Consensus size: 26
13656732 CTGGTCCGAT
*
13656742 CTTAGACTACGAATGAACTCCATATG
1 CTTAGACTACGAATGAAATCCATATG
** *
13656768 CTTAGACTTGGAATGAAATCCGTATG
1 CTTAGACTACGAATGAAATCCATATG
13656794 CTTA
1 CTTA
13656798 AGTCAACCCA
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.20, G:0.18, T:0.30
Consensus pattern (26 bp):
CTTAGACTACGAATGAAATCCATATG
Found at i:13657194 original size:895 final size:891
Alignment explanation
Indices: 13655175--13660177 Score: 6741
Period size: 889 Copynumber: 5.6 Consensus size: 891
13655165 GGGCGGGCGG
* * * * *
13655175 GGCGGGCAGGCACTATGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTCG
1 GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
13655240 GTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
66 GT-GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
13655305 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAA
130 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
** * * *
13655370 TTTTCCAAAACTTTTTGCAGTTC-GAGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCCCCAA
195 TTTT-TGAAACTTTTTGCGGTTCAGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* * *
13655434 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCAAAAAAAAATTCAGAT-AAAACTCGAA
259 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * *
13655498 GTGTACAAGATTTTGTCATCATTTGAAAAAAGTGTCCCCATTTCAGACACATTAATGGCTACTGG
324 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
*
13655563 CAGCAAACCTCTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
389 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* *
13655628 TAGGGGGCCAATATAAAGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA-CCCCCGGC
454 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* * * *
13655692 CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATAGTCTGACGACGGTGCC
519 CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT-GTCCGGCGATGGTGCC
* * * * *
13655757 CCGACGAAGAAAAATACGGCACCAGCACACGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGAT
583 CCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
** * * *
13655822 CCAATCCGATTTTAGATTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAATTCCGTATGCCT
648 CCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * *
13655887 AAGTCAACCGATGAAATGAGTGTGCGGGCGATCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGG
713 AAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* ** * *
13655952 GGATCG-GCCGGGTCCCCTTCTGCATGCTGTCGATCCTGCTGTCGCAACCCTC-GATCCAGTCTG
778 GGATCGAGCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCA----G
* * * * **
13656015 ATCCCATCTTAGATTGGGAATTAACTCCGTAAGCCTAAGCCAACTAACGAAACGA
838 -TCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
13656070 GCGGGTGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGAT
1 ----------GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
*
13656135 AGGGTGGTAGGTGCGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTG
56 AGGGTGGTAGGTG-GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTG
* **
13656200 TAAATTCATACAATGGTCCCTCAAGCCTTCAAATGAAGTTTCATGGCAAGACGACTCGTTTTCTA
120 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* *
13656265 TTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGA-ATTTTTTTAAATTTTTTCAGAAGGAGTTT
185 TTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGAGATTTTTTAAAATTTTTTCAGAAGGAGTTT
*
13656329 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
250 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
13656394 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
315 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
*
13656459 GGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
380 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
*
13656524 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAAGTGCGCACA
445 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * *
13656589 CCCCCCTTCAGCCCCTCCGATCGTCGGAACCTCGATGCCGTCGGTCAGGTTCTCCGGCGATGCTC
510 -CCCCC--CGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG-TC
* * * *
13656654 CGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCAAATGCTCGAGCCCAGCATCTACTGC
570 CGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * * *
13656719 CACAACCCTCGGTCTGGTCCGATCTTAGACTACGAATGAACTCCATATGCTTAGACTTGGAATGA
635 CGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * * * *
13656784 AATCCGTATGCTTAAGTCAACCCACGGAATGAGCGTACGGGCGCTCAGCTGACCAGAGGGGCGAG
700 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * *
13656849 ATGAGCAAGTCGAGGATCGACCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCT
765 ATGCGCAAGCCGGGGATCGAGCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCT
* * *
13656914 CAGTCCAGTCCAATCTTAGATTGGGAATGAACTCCGTATGCCTATGCCAACTGACGAAACGA
830 CAGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
13656976 -GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAG
1 GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* *
13657040 GTGAGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
66 GTG-GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
*
13657105 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGA
130 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
13657170 TTTTTGAAACTTTTTGCGGTTCAGA-ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
195 TTTTTGAAACTTTTTGCGGTTCAGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
* *
13657234 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCATCTAAAAACTCAAAG
260 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
13657299 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGTTATTGGC
325 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
13657364 AGCAAAGCTGTAAAATCTCAAATACTC-TTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGAT
390 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * *
13657428 AGCGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGTTCGCACACCCCCCGGCC
455 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
* *
13657493 CCCTCGATC-TCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATGGTCCGGCGATGGTGC
520 CCC-CGATCGT-CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT-GTCCGGCGATGGTGC
* *
13657557 CCCGATGAAGAAAAATGCGACACCAACACATGCCCGAGCCCAGCAT-TGCTGCCGCAACCCTCGG
582 CCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * *
13657621 TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTACGCTTAGACTAGGAATGAACTCCGTATGCC
647 TCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
13657686 TAAGTCAACCCACGAAACGAGCGTGTGGGCGCTTAGTCGGCCAGAGGGGCGGGATGCGCAAGCCG
712 TAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * * **
13657751 GGGATCGA-CCGGGTCCCCCTCTGTGTGCTGCCAATCTTGCTGCCGCAACCCTCAATCCGGTCTG
777 GGGATCGAGCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCAGTCCA
** * *
13657815 ATCTTAGACCAGGAATTAACTCCGTATGCCTAAGCTAACCGACGAAACGAA
842 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-A
* ** * * **
13657866 TGGGTGGGCGGGTGCTACGCCGGCCAGAGAGACGGGATGCACTAGTTGTGGATCGATAGGGTGGT
1 --GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
13657931 AGGTTGGTTTAGGTACATCTTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCT
64 AGG-TGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
*
13657996 TACTATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
128 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
* * ** *
13658061 GATTTTTGAAACTTTTTACGGCTC-GAGATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCCA
193 GATTTTTGAAACTTTTTGCGGTTCAGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
*
13658125 AACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
258 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* * *
13658190 AGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTGAGACACTTTAATGGCTATTG
323 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * *
13658255 GCAGCAAACCTGTAAAATCTCAAATGCTCCTTAAGGAGGTGTGAGTTCTTGAGGTTTGATGAGGG
388 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
*
13658320 ATAGGGGGCCAATATAAGGGCCAATGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCTC
453 ATAGGGGGCCAATATAAGGGCCAA-GTACCAGCACCCATCGCACATCATGTGCGCACA-CCCC-C
* * * *
13658385 TCGGCCCCCCCGATC-ACTGGAACCCCAATGTCGCTGGTCAGGTTCTCCGGCGATG-CCGGAGAT
515 -CGG-CCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGTCCGGCGAT
* * * *
13658448 GGTGCCCCGGTGAAGAAAAATGTGGCACCAGTACATGCCCGAGCCCAGCATGTACTGCCGCAACC
577 GGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* * * * * * *
13658513 CTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTTCTTATGCTTAGACTGGGAATGAATTCTGT
642 CTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * *
13658578 ATGCCTAAGTCAACTCACGAAACGAGTGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGTTGCGCA
707 ATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* *
13658643 AGTCGGGGATC-AGCCAGGTCCCCCTC--TGTG-T---G---CTG-T--CGCAACCCTCAGTCCA
772 AGCCGGGGATCGAGCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCA
*
13658695 GTCCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAATGGGCGA
837 GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA----CGA
* * * *
13658754 GCGGGCGGGCGGGCACTACACCAGCCAGAGAGACGAGATGCGCAAGTCGTGGATCGATAGGGTGG
1 ---GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * *
13658819 TAGGTGGGTTTAGGCATATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
63 TAGGT-GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTC
** * * * * *
13658884 ATACAATGGTCTGTTAGGCCTTCACGCGAAGTTTCACGCCAAAACGACTCGTTTTCTATTTTTCA
127 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
** * *
13658949 CGATTTTTGAAACTTTTTAAGGTTC-GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
192 CGATTTTTGAAACTTTTTGCGGTTCAGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCC
* *
13659013 AAACTTGGTAGACGTGATACTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTACAAACTCG
257 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* *
13659078 AAGTGTACAAGATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACT
322 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
13659143 GGCAGCAAACTTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGG-TT--T----
387 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * *
13659201 GATAGGGGGCCAATATAAGGGCCAAGTATCAGCACCCATCGCACGTCATGTGTGCACACCCCCCG
452 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* ** * *
13659266 GCCCCCCGATCGTTGGAACCCCAATGTTGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTG
517 GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG-TCCGGCGATGGTG
* * * * **
13659331 CCCCGACGAAGAAAAATGCGACACCAGCACATGCCCAAGCCTAGCATGTGCTGCTACAA-CC-C-
581 CCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
13659393 -T-C-G---G-TC-----C---G-AT---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGC
646 GTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * *
13659435 CTAAGTCAAACGACGAAATGAGTGTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCC
711 CTAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
** * * ** *
13659500 GGGGATCG-GCCGGGTCCCCCTCTACGTGCTACCGATCCTGCTACCATAACCCTCGGTCCAGTCC
776 GGGGATCGAGCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCAGTCC
* * *
13659564 GATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACTAAATGAAGGGGCGGGCA
841 AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-----GAA---AC--G-A
* * * * *
13659626 GGCGGGCGAGCACTACGTCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATTGCGTGGTAG
1 GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
13659691 GTGGATTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
66 GTGG-TTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * * *
13659756 CAATGGTCCTTTAAGCCTTCACATGAAGTTTCATGGAAAGACGACTCGTTTTCTATTTTTCATGA
130 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
** * *
13659821 TTTTCAAAACTTTTTGCAGTTCA-AGATTTTCTTAAAATTTTTTCAAAAGGAGTTTTGGCCCCAA
195 TTTTTGAAACTTTTTGCGGTTCAGAGATTTT-TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* *
13659885 ACTTGGTAGCCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAGTCGAA
259 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* *
13659950 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTATTGG
324 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
*
13660015 CAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
389 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* **
13660080 TGGGGGGCCAATATAAGGGCCAAGTACCAGCATGCATCGCACATCATGTGCGCACACCCCGCCGG
454 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGG
* *
13660145 CCCCCCCGATCGTCGGAACCGCAATACCGCCGG
518 -CCCCCCGATCGTCGGAACCCCAATGCCGCCGG
13660178 CCAGCATGTG
Statistics
Matches: 3670, Mismatches: 354, Indels: 174
0.87 0.08 0.04
Matches are distributed among these distances:
853 101 0.03
854 2 0.00
855 3 0.00
856 1 0.00
857 2 0.00
859 1 0.00
860 2 0.00
861 1 0.00
862 3 0.00
863 1 0.00
864 1 0.00
865 58 0.02
868 2 0.00
869 195 0.05
870 211 0.06
871 3 0.00
872 1 0.00
873 2 0.00
875 1 0.00
877 101 0.03
878 9 0.00
879 87 0.02
880 4 0.00
881 29 0.01
882 25 0.01
885 59 0.02
886 1 0.00
887 1 0.00
888 6 0.00
889 493 0.13
890 136 0.04
891 99 0.03
892 3 0.00
893 387 0.11
894 147 0.04
895 429 0.12
896 58 0.02
897 153 0.04
898 40 0.01
899 5 0.00
904 101 0.03
905 375 0.10
906 49 0.01
907 5 0.00
909 7 0.00
910 225 0.06
911 44 0.01
912 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
GTGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
TTTTGAAACTTTTTGCGGTTCAGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC
TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGTCCGGCGATGGTGCCCCG
ATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
GTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
TCAACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
TCGAGCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCAGTCCAATCT
TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
Found at i:13657661 original size:26 final size:26
Alignment explanation
Indices: 13657632--13657681 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
13657622 CCGGTCTGAT
*
13657632 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTAGGAATGAACTCCGTACG
13657658 CTTAGACTAGGAATGAACTCCGTA
1 CTTAGACTAGGAATGAACTCCGTA
13657682 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.22, G:0.24, T:0.24
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTACG
Found at i:13658565 original size:26 final size:26
Alignment explanation
Indices: 13658529--13658581 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
13658519 CTGGTCTGAT
13658529 CTTAGACTGGGAATGAACTTCT-TATG
1 CTTAGACTGGGAATGAA-TTCTGTATG
13658555 CTTAGACTGGGAATGAATTCTGTATG
1 CTTAGACTGGGAATGAATTCTGTATG
13658581 C
1 C
13658582 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 4 0.15
26 22 0.85
ACGTcount: A:0.26, C:0.15, G:0.25, T:0.34
Consensus pattern (26 bp):
CTTAGACTGGGAATGAATTCTGTATG
Found at i:13660244 original size:26 final size:26
Alignment explanation
Indices: 13660215--13660267 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13660205 CCAGTCCGAT
*
13660215 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
13660241 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13660267 C
1 C
13660268 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13661140 original size:26 final size:26
Alignment explanation
Indices: 13661104--13661156 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13661094 CCAGTCCAAT
*
13661104 CTTAGACTGGGAAAGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCATATG
*
13661130 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAAAGAACTCCATATG
13661156 C
1 C
13661157 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCATATG
Found at i:13662022 original size:26 final size:26
Alignment explanation
Indices: 13661993--13662045 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13661983 CCGGTCCGAT
*
13661993 CTTAGACTGGGATTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13662019 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13662045 C
1 C
13662046 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13662928 original size:26 final size:26
Alignment explanation
Indices: 13662899--13662951 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13662889 CCAGTCCGAT
* *
13662899 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
13662925 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13662951 C
1 C
13662952 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:13663558 original size:26 final size:26
Alignment explanation
Indices: 13663522--13663574 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
13663512 GTTGACTTAG
13663522 GCATACGGAGTTCATT-CCTAGTCTAA
1 GCATACGGAGTTCATTACC-AGTCTAA
*
13663548 GCATATGGAGTTCATTACCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
13663574 G
1 G
13663575 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTACCAGTCTAA
Found at i:13665281 original size:26 final size:26
Alignment explanation
Indices: 13665245--13665297 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13665235 GTTGACTTAG
13665245 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13665271 GCATACGGAGTTCATTCGCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13665297 G
1 G
13665298 ATTGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13666207 original size:29 final size:27
Alignment explanation
Indices: 13666155--13666211 Score: 78
Period size: 28 Copynumber: 2.0 Consensus size: 27
13666145 GTTGACTTAG
13666155 GCATACGGAGTTCATTCCCCAGTCCTAA
1 GCATACGGAGTTCATTCCCCAGT-CTAA
**
13666183 GCATACGGAGTTTCATTCGGCAGTCTAA
1 GCATACGGAG-TTCATTCCCCAGTCTAA
13666211 G
1 G
13666212 GATTGGACCG
Statistics
Matches: 26, Mismatches: 2, Indels: 2
0.87 0.07 0.07
Matches are distributed among these distances:
28 15 0.58
29 11 0.42
ACGTcount: A:0.25, C:0.26, G:0.23, T:0.26
Consensus pattern (27 bp):
GCATACGGAGTTCATTCCCCAGTCTAA
Found at i:13667109 original size:26 final size:26
Alignment explanation
Indices: 13667073--13667125 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
13667063 GTTGACTTAG
13667073 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13667099 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13667125 G
1 G
13667126 ATTGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13668012 original size:26 final size:26
Alignment explanation
Indices: 13667976--13668027 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
13667966 GTTGACTTAG
13667976 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
13668002 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
13668028 TATTGGACCA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.23, G:0.19, T:0.31
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCTAGTCTAA
Found at i:13669787 original size:26 final size:26
Alignment explanation
Indices: 13669758--13669810 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13669748 GTTGACTTAG
*
13669758 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
13669784 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
13669810 G
1 G
13669811 ATCAGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:13669978 original size:26 final size:26
Alignment explanation
Indices: 13669928--13669979 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
13669918 GTTGACTTAG
* *
13669928 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAATCTAA
**
13669954 GCATACGGAGCTCATTTTCAATCTAA
1 GCATACGGAGCTCATTCCCAATCTAA
13669980 AATCGGATCG
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.25, G:0.17, T:0.29
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAATCTAA
Found at i:13670848 original size:26 final size:26
Alignment explanation
Indices: 13670818--13670870 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13670808 GTTGACTTAG
*
13670818 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
13670844 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
13670870 G
1 G
13670871 ATTGGGCCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:13671734 original size:26 final size:26
Alignment explanation
Indices: 13671705--13671757 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13671695 GTTGACTTAG
**
13671705 GCATACGGAGTTCATTTTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13671731 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13671757 G
1 G
13671758 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13672635 original size:26 final size:26
Alignment explanation
Indices: 13672599--13672651 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13672589 GTTGACTTAG
13672599 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13672625 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13672651 G
1 G
13672652 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13675937 original size:16 final size:16
Alignment explanation
Indices: 13675916--13675947 Score: 64
Period size: 16 Copynumber: 2.0 Consensus size: 16
13675906 CCCACCTACC
13675916 ACCTTATCGATACACG
1 ACCTTATCGATACACG
13675932 ACCTTATCGATACACG
1 ACCTTATCGATACACG
13675948 GCTTGCGCAT
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 16 1.00
ACGTcount: A:0.31, C:0.31, G:0.12, T:0.25
Consensus pattern (16 bp):
ACCTTATCGATACACG
Found at i:13676211 original size:26 final size:26
Alignment explanation
Indices: 13676175--13676227 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13676165 GTTGAATTAG
* *
13676175 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
13676201 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
13676227 G
1 G
13676228 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:13677923 original size:890 final size:892
Alignment explanation
Indices: 13669844--13679152 Score: 11778
Period size: 899 Copynumber: 10.4 Consensus size: 892
13669834 ATAGCAGGAT
* * * * * * * *
13669844 GGGGACCCGACCGATCCCCGGCTTGCACATCCCGCCCTTCAGG-CTGGCTAAGCGTCCGCACGCT
1 GGGGACCCG-TCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTC-GGCTGAGCGCCCGCACGCT
* * **
13669908 CGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGCTCATTTTC
64 CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCC
* * * * * * *
13669973 AATCTAAAATCGGATCGGACCAAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGC
129 AGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
** *
13670038 CGTATTTTTCTTCGCCGGGGCACCATCG-C----CA------GAGAACCTGGCC-A-GCGCATTG
194 CACATTTTTCTTCG-CGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACG-GCATTG
* * ** * * * *
13670090 AGGTTCCGGCGATCGAAGGGGCCAGGGGGTGTGCGCACATGATATGCAATGGGTGCTGGTACTTG
257 GGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTG
*
13670155 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTT
322 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
* * *
13670220 GAGATTTTACAGGTTCGCTACTAGTAGCCATTAAAGTGTCTG-AATGGGGACACTTTTTTCAAAT
387 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* * * *
13670284 GGCCACAAAATCTTGTACACTTCGAGTTTTTAGGTGAATCTTTTTGTGCACGCCAACAAAAATAC
452 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
**
13670349 AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAATTTTAAAAAATCTTGAA
517 AAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCG-AAAAAATTTTAAAAAATCCCGAA
* * * * *
13670414 CCG-TAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGACTTGCCATGAAATTTCATGTG
580 CCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
** *
13670478 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCGTGTAGAAATATG
645 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * * * *
13670543 AAGATGTGCCTAAACCCACCTACCACCTTATCGATCCACGGCTTGAGTATCCCGTATCTCTGGCC
710 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCC
* *
13670608 GACGTAGTGCCCGCCCGTCCGCCCAGCCGCTCGTTTCGTGGGTTGGCTTAGGCATACGGAGTTCA
775 GGCGTAGTGCCCG--C--CCG--C--CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * * ***
13670673 TTCCCAGTCTAAGATCGGACCGGACCAAGGGCTACAGCAGCAGGATCGACAGCACATAGAG
832 TTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
* * * * *
13670734 GGGGACCCAGTCGATCC-CTGGCTTGCGCATCTCGCCCCACTGGCCGGCTGAGCGCCTGCACGCT
1 GGGGACCC-GTCGATCCTC-AGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCT
** * *
13670798 AATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCC
64 CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCC
* * * * *
13670863 AGTCTAAGATTGGGCCGGACTGGGGGTT-CTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
129 AGTCTAAGATCGGACCAGACCGAGGGTTGC-GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* * * * * *
13670927 CCGCATTTTCCTT-------CACCA------GAGCAACGCCGGAGAACCTGATCGGCGACATTGG
193 CCACATTTTTCTTCGCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGG
** * * *
13670979 GGTTCCGGTGATCGGGGGGGCCGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTAGG
258 GGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGG
*
13671044 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTG
323 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* * * *
13671109 AGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGATACCTTTTCCAAATG
388 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* * *
13671174 GTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTTTGCATGCCAACAAAAATAAA
453 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACA
* * ** *
13671239 AGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCAAAACA
518 AGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACC
* * *
13671304 GC-AAAAGTTTCGAAAATCGTGAAAAATAGAAAATGAGT-GTCTTGCCATGAAATTTCACGTGAA
582 GCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* *
13671367 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATGAAAATGGCATTGGCATGCAGAAATATGAA
647 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
* * * * * *
13671432 GATGTGCATAAACCCTCCTACCACCTTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGA
712 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGG
* *
13671497 CGTAGTGCCCGTCCGTCCGCTCGCCCGCTCTTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATT
777 CGTAGTG--C--CCG--C-C-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * *
13671562 CCCAGTCTAAGAT-GGAATCAGACCGAGGGTTGTAGCAGCAGGATCGACAGCACGCAGAT
834 CCCAGTCTAAGATCGG-ACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
* * * * *
13671621 GGGGACCCGACCGATCC-CTAACTTGTGCATCTCACCCCTCTGGTCGGCTGAGCGCCCGCACGCT
1 GGGGACCCG-TCGATCCTC-AGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCT
* **
13671685 CATTTCAG-GGGTTGACTTAGGCATACGGAGTTCATTTTCAGTCTAAGCATACGGAGTTCATTCC
64 CGTTTC-GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* *
13671749 CAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTG
128 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* * * * * *
13671814 -CAGCATTTTTCTTTGCCAGGGCACCATCGCCGGAGCATCGTCGGAGAATCTGATCGGCGGCATT
193 CCA-CATTTTTCTTCG-CGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATT
* * * * *
13671878 GGGGTT-CGATGATCGGAGGGGCCGGGGGGTGTGCACACATGATGTGCAATGGGTGCTGGTACTT
256 GGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTT
* * *
13671942 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTTAAGAGTATT
321 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATT
* ** * *
13672007 TGAGATTTTACAGCTTTGCTGCCAAAAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAT
386 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
* * *
13672072 TGGTCACAAAATCTTGTACACTTTGAGTTTTTAG-TCGAATTTTTTTGTGCATGCCAAAAAAAAA
451 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT-GAATTTTTTTGTGCATGCCAACAAAAAT
* * *
13672136 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTCCAAAAAAATTTAAAAAAATCCCGA
515 ACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGA
** * * * *
13672201 ACCTTAAAAAGTTTCATAAATCATGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACAT
579 ACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* ** *
13672266 GAAGACTTAAGGGACCATTGTATGAATTTACAAGTGATAAAAATGGCATTGGCACACAGAAATAT
644 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATAT
* * * * *
13672331 GAAGATGTACCTAAACCCACCGACCATCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCAGGC
709 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGC
* * * * *
13672396 CGACGTAGTGCCTGCCCGCCCGTTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAA
774 CGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
* * * * *
13672461 ACTAAGATCGGATCAGACCGAGGGTTGCGGTAGCAGGATCAGCAGCATG-AGGAG
839 TCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCA-GAG
* * ** * * *
13672515 GGGGACCCGATCGATCCCCGGCTTGCGCATCTAGCCGCTCTGGCCGGCTGAGGGCCCGCACGCTC
1 GGGGACCCG-TCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTC
* *
13672580 GTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCA
65 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
* * * * *
13672645 GTCTAAGATCAGACCGGACCGAGTGTTACGGCAGCACATGCTGGGCTCGGGCATATGCTGGTGCC
130 GTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
* * * *
13672710 ACATTTTTCTTCGTCGGGGCACCATCGCC---G-A-------AGAACCTGACCGGCGACGTTAGG
195 ACATTTTTCTTCG-CGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGG
** * * * * *
13672764 GTTCCGGTGATC-AGGGGGCCGGGGGGTATGCGCACATGATGTACGATTGGTGCTGGTACTTGGC
259 GTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGGC
* *
13672828 CCTTATATTGGCCCCCTATCCCTCATCAAACGTCGAGAACTCACACCCCCTTAAAGAGAATTTGA
324 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
* * * * *
13672893 GATTTTACAGGTTTGCTACCAGTAGCAATTAAAATTTCTGAAACGGGGACACTTTTTTCAAATGG
389 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
*
13672958 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAA
454 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
* * *
13673023 GGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCCAACGG
519 GGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCG
* * *
13673088 CAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAG
583 CAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* * **
13673153 GCTTAAAGGAGCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAG
648 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * ** *
13673218 ATGTGCATAAACCCACCTACCACCCTATTGATCCACGACTTGTACATCCCGTCTCTGTGGCCGGC
713 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
* * * *
13673283 GTAGTTCCCGCCCGCCCGCCCCTC-TGTTCGTTTTATCTGTTGGGTTAGGCATACGGAGTTCAGT
778 GTAGTGCCCGCCCGCCCG---CTCGT-TTCG-----TCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * * * * * *
13673347 CCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGTAGTAGGATCGACAACACGTAGAA
834 CCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
* * * * *
13673406 GGGGACCCGATCGATCC-CCGATTTGCGCATCTCGCCCCTCTGGTCGGTTGAGCGCCTGCACAG-
1 GGGGACCCG-TCGATCCTCAG-CTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCAC-GC
* * * * *
13673469 TCTTTTCGTGGGTTCACTTAGGCATATGGAGTTGATTCCCAGTCTAAGCATACGAAGTTCATTCC
63 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* * **
13673534 CAGTCTAAGATCGAACC-GAACCGAGGGTTACGGCAGCACATGCTACGCTCGGGCATGTGCTGGT
128 CAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * *
13673598 GCCGCATTTTTCTTCGCTGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCAACGGCATT
192 GCCACATTTTTCTTCGC-GGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATT
* * *
13673663 GGGGTTCCGGCGATC-GGGGGGCCGGGGGGTGAGCGCACATGATGTGCGATGGGTGCTGGTACTT
256 GGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTT
* * *
13673727 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAATTCACACCCCCTTACAGAGCATT
321 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATT
* *
13673792 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGAACACTTTTTTCATA
386 TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
* *
13673857 TGGTCACAAAATCTTGTACGCTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATA
451 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATA
* *
13673922 CAAGGATCACGTCTGA-CAAGTTTGGTGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGA
516 CAAGGATCACGTCT-ACCAAGTTTGG-GCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGA
* * *
13673986 ACC-CAAAAAAAAAAATTTTCAAAAATCGTGAAAAATAAAAAATGAGTCGTCTTGCCATGAAACT
579 ACCGC------AAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * **
13674050 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCACAAAAATGGCAATGGCACATAG
638 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
* * * *
13674115 AAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACGGCTTGTGCATCCCGTCTT
703 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTC
** ** *
13674180 TCTGGCAAGCGTAGTGCCCGCCCGCCCGTCGGCCCGCTCGTTTCGTCGACTGGCTTAGGCATACA
768 TCTGGCCGGCGTAGT----GCCCG-CC--C-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * ** * *
13674245 AAGTTCATTCCCAGTCTAAGATCAGACTGGACGGAGGGTTGCAGCAGCAGGATCGGCAGCACGCA
825 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCA
13674310 GAG
890 GAG
* * * * * *
13674313 GGGGA-CC-T--AGCC-GA-TTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCGCCCGTACGCTCG
1 GGGGACCCGTCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCG
*
13674372 TTTCCTGGGTTGACTTAGGCATACGGAGTTCA-T-----TC----C-T-----G----------G
66 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
* ** * *
13674411 TCTAAGATCAGACCAGATTGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCA
131 TCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCA
* *
13674476 CATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACCGACGGCATTGGGG
196 CATTTTTCTTC-GCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGG
* * * *
13674541 TTTCGACGATCGGGCGGGCCGGGTGGATGTGCGCACATGATGTGTGATGGGTGCTGGAACTTGGC
260 TTCCGACGATCGGGGGGGCCGGG-GGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGGC
* * * * *
13674606 CCTTCTATTGGCCCCCTATCTCTCATCAAATCTCGAGAACTCACACACCCTTAGAGAGCATTTGA
324 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
*
13674671 GATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
389 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* *
13674736 TCACAAAATCTTATGCACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
454 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
* **
13674801 GGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTTGAACCG
519 GGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCG
* *
13674866 CAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCTTCCCATGAAACTTCACGTGAAG
583 CAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* * * * * *
13674931 GCATAAAGGACCGTTGTATGAAGTTACAAGCCATAAAAATGACATTGGCACGTAGAAATATGAAG
648 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * *
13674996 ATGTGCCTAAACCCACCTACCACCTTATCGATCCACGACTTGCGCATCCCATCTCTCTGGCTGGC
713 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
* * *
13675061 GTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGTATACAGAGTTTATTCCCAG
778 GTAGT----GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
* ** * * * *
13675126 TCTAAGATCGGACCAGACTGAGGGTTGTGGCAACAGGATCGACGGCACGCAGAG
839 TCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
* * * * * * *
13675180 GGCGACCCGACAGATCCCCAGCTTACGCAT-CCGCCCCTCTGGCCGGCTGAGCACCCGCATGCTC
1 GGGGACCCGTC-GATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTC
* * * * * *
13675244 ATTCCGTGGGTTGACTTAGGCGTACAGAGTTCGTTCCTAGTCTAAGCATACGGAGTTCATTCCCA
65 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
* * * * * *
13675309 GTCTAAGATCAGACCGGATCGAGGGTTGTGACAGCACATGCTGGGCTCGGGCATGTGTTGGTGCC
130 GTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
* * * *
13675374 ACATTTTTTTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGATGGCATTGGG
195 ACATTTTTCTTC-GCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGG
* * *
13675439 GTTCTGACGATCGGGCGGGCCGAGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGAACTTGG
259 GTTCCGACGATCGGGGGGGCCG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGG
* * *
13675504 CCCTTATATTGGCCCCCTATCTCTCATCAAATCTCGAGAACTCACACGCCCTTAAAGAGCATTTG
323 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
*
13675569 AGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
388 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
13675634 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACA
453 GTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACA
* * * * * *
13675699 AGGATCACGTCTACCAAGTTTGGCACCAAAACTCCTTCTGAGAAAATTTTTAAAAGTCCCGAACA
518 AGGATCACGTCTACCAAGTTTGG-GCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACC
* *
13675764 GCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
582 GCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
* *
13675829 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAA
647 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
*
13675894 GATGTGCCTAAACCCACCTACCACCTTATCGATACACGACCTTATCGATACACGGCTTGCGCATC
712 GATGTGCCTAAACCCACCTACCACCCTATCGAT------CC--A-CG----A---CTTGCGCATC
* * ** *
13675959 CCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCACAGGCATATGG
761 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * * *
13676024 AGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTG-TGCCAGCAGGATTGGCAGCATGCA
826 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAG-CAGCAGGATCGGCAGCATGCA
13676088 GAG
890 GAG
* * * *
13676091 GGGGACCCGGTTGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGACTGAGCACCCGTACGCTC
1 GGGGACCC-GTCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTC
* *
13676156 GTTTCGTGGGTTGAATTAGGCATATGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
65 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
* * *
13676221 GTATAAGATCGGACCAGACCGAGGGTTGTC-GCAGCACATGCTGGGCTTGGGCATGTGCTGGTGT
130 GTCTAAGATCGGACCAGACCGAGGGTTG-CGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
* * * * ** *
13676285 CGCATTTTTCTTCGCTGGGCACCATCGCTGGAGCATCACCAAAGAACCTGACCGGCGGCATTGGG
194 CACATTTTTCTTCGCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGG
* * * * *
13676350 TTTTCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATATGC-ATTGGGTGCTGGTACTTGG
259 GTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA-TGGGTGCTGGAACTTGG
*
13676414 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTG
323 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* *
13676479 AGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCT-AAATCGGGACACTTTTTTCAAAT
388 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-CTGAAATGGGGACACTTTTTTCAAAT
* *
13676543 GGTCACAAAATCTTGTGCACTCCGAGTTTTTAGCTGAATTTTTTT-TGCATGCCAACAAAAATAC
452 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
* *
13676607 AAGGATCATCG-CTACCAAGTTTGGGGCCAAGACTCCTTCCGAAAAAATTTTAAAAAATCTCGAA
517 AAGGATCA-CGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAA
*
13676671 CCGCAAAAAGTTTCAAAAATCGTGAAAAATATAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
580 CCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* * *
13676736 AAGGCTTAAGAGACGATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATG
645 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATG
* * * *
13676801 AAGATGTGCCTAAACCAACCTATCACTCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
710 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCC
** * * * * *
13676866 AACATAGTG-CCGCACGTCCGCTCGTTTCATCTGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
775 GGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
** ** * *
13676930 CTAAGATCGGAATAGACTAAGGGTTGCAGCAGCAGGATCAGTAGCATGCAGAG
840 CTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
* * * * * *
13676983 GGGAACCCGATCGATCCCCGGCTTGCACATCCTGCCCCTCTGGTCGGCTGAGCGCCCGTACGCTC
1 GGGGACCCG-TCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTC
** * *
13677048 GTTTTTTGGGTTGACTTAGGCATACCGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCA
65 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
** *
13677113 GTCTAAGATCGGACTGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
130 GTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
* * * * * *
13677178 GCATTTTTCTTTGTCGGGGCACCATCACCGAAG-ATCGCCTGAGAACCTAACCGACGGCATTGGG
195 ACATTTTTCTTCG-CGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGG
** * * *
13677242 GTTCCGGTGATCGGGGGGGCCGGGGGGTGTGCGCACATGATATGCGTTGGGTGCTGGTACTTGGC
259 GTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGGC
13677307 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
324 CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
13677372 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT-GGGACACTTTTTTCAAATGG
389 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
13677436 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAACAAAAATACAA
454 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
** *
13677500 GGATCACGTCTACCGTGTTTGGGCCACAACAT-CTTCCGAAAAAATTTTAAAAAATCCCGAACCG
519 GGATCACGTCTACCAAGTTTGGGCCAAAAC-TCCTTCCGAAAAAATTTTAAAAAATCCCGAACCG
* *
13677564 TAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATTAAACTTCACGTGAAG
583 CAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* * *
13677629 GCTTAAGGGACCATTGTATTAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATTTGAAG
648 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* *
13677694 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCTCGACTCTCTGGCCGGC
713 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
* ** *
13677759 GTAGTG-CCGCGCATCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCTGTCTA
778 GTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* *** * *
13677823 AGATTGGAATGGACCGAGGGTTGCAGCAGCAAGATCGGTAGCATGCAGAG
843 AGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
13677873 GGGGACCCAGTCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTC
1 GGGGACCC-GTCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTC
* * * * *
13677938 GTTTTGTCGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAAGCATACAGAGTTAATTCCCA
65 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
* * * * * *
13678003 GTCTATGATCGGACCAGACCGAGGGTTGTGGCAGCCCATGCTAGGCTCGGGCATGTGCTAGTGCT
130 GTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
* * * ** * *
13678068 ACATTTTTTGTTAGTCGGGGCACCGTCGCCAAAGCATCGCCAGAGAACCTGACCGAGCGGCATTA
195 ACA-TTTTTCTTCG-CGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGA-CGGCATTG
* * **
13678133 GGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTGCTTG
257 GGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTG
* *
13678198 GCCCATATATTGGCCCCCTATCTCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
322 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
** * *
13678263 GAGATTTTACAGGTTTTTTGCCGGTAGCCATTAAAGTGTCTGAAATTGGGACACTTTTTTCAAAT
387 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
13678328 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
452 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
* * ** * *
13678393 AAGGATCACGTTTACCAAGGTTGGGGTGAAAACACCTTTCGAAAAAATTTTAAAAAATCCCGAAC
517 AAGGATCACGTCTACCAA-GTTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAAC
* *
13678458 CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCAATGAAACTTCACGTGA
581 CGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
*
13678523 AGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCA-GCAGAAATATGA
646 AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGA
* * *
13678587 AGATGTGCCTAAACCCGCCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCCG
711 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCG
* * *
13678652 GCGTAGTGCCCGCCCAACCGCTAGCTCGTTTCGTCGGTGGGCTTAGGCATACGGAGTTCATTTCC
776 GCGTAGTGCCCGCCC-GCC-C--GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* * ** * **
13678717 AGTCTAAGATTGGACCAGACCGAGTGTTGTGGTAGCAGGATCGGCAGCACACAGAG
837 AGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
* * * * *
13678773 GGGGACTCGGCCGAT-CTCCAGCTTGCGCATCCCGCCCCTCTGG-CTGGCTGAG-GGCCACACGT
1 GGGGAC-CCGTCGATCCT-CAGCTTGCGCATCCCGCCCCTCTGGTC-GGCTGAGCGCCCGCACGC
* * *
13678835 TTGTTTCGTGGGTTGACTTAGGCATACGGAGCTCATTCCCAGTCTAAGCATAGGGAGTTCATTCC
63 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* * *
13678900 CAGTCTAAGATCGAACCAGATCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
128 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
** * * *
13678965 CCGTATTTTTCTTCGCTGGGGCACCATCGCCGGGGCATCGTCGGAGAACCTGACCGACGGCATTC
193 CCACATTTTTCTTCGC-GGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTG
* * *
13679030 GGGTTTCAACGATCGGGGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGAGTGCTGGAACTT
257 GGGTTCCGACGATCGGGGGGGCCG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTT
* * *
13679095 AGCCCTTATATTGGCCCCCTATCCCTCAGCAAACCTCAAGAACTCACACCCCCTTAAA
321 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
13679153 ATGGGGACAT
Statistics
Matches: 7427, Mismatches: 805, Indels: 366
0.86 0.09 0.04
Matches are distributed among these distances:
867 92 0.01
868 3 0.00
870 2 0.00
871 187 0.03
872 3 0.00
873 58 0.01
874 132 0.02
875 13 0.00
876 274 0.04
877 3 0.00
879 2 0.00
881 2 0.00
882 5 0.00
883 491 0.07
884 10 0.00
885 1 0.00
886 10 0.00
887 423 0.06
888 220 0.03
889 122 0.02
890 681 0.09
891 395 0.05
892 484 0.07
893 220 0.03
894 341 0.05
895 131 0.02
896 158 0.02
897 31 0.00
898 136 0.02
899 707 0.10
900 483 0.07
901 71 0.01
902 461 0.06
903 3 0.00
904 1 0.00
905 2 0.00
906 2 0.00
907 258 0.03
908 2 0.00
909 223 0.03
910 204 0.03
911 181 0.02
912 163 0.02
913 1 0.00
914 1 0.00
915 34 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (892 bp):
GGGGACCCGTCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCG
TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
TCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCA
CATTTTTCTTCGCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGT
TCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGGCCC
TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
ACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGG
ATCACGTCTACCAAGTTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAA
AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATG
TGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGCGTA
GTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
TCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCATGCAGAG
Found at i:13678896 original size:26 final size:26
Alignment explanation
Indices: 13678856--13678908 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13678846 GTTGACTTAG
13678856 GCATACGGAGCTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
* *
13678882 GCATAGGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
13678908 G
1 G
13678909 ATCGAACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.23, T:0.25
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAGTCTAA
Found at i:13679734 original size:26 final size:26
Alignment explanation
Indices: 13679704--13679755 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13679694 GTTGACTTAG
13679704 GCATACGGAGTTCATT-CCTAGTCTAA
1 GCATACGGAGTTCATTGCC-AGTCTAA
13679730 GCATACGGAGTTCATTGCCAGTCTAA
1 GCATACGGAGTTCATTGCCAGTCTAA
13679756 CATCCGACCG
Statistics
Matches: 25, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.27, C:0.23, G:0.21, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTGCCAGTCTAA
Found at i:13680636 original size:26 final size:26
Alignment explanation
Indices: 13680606--13680657 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13680596 GTTGACTTAG
13680606 GCATACGGAGTTCATT-CCTAGTCTAA
1 GCATACGGAGTTCATTGCC-AGTCTAA
13680632 GCATACGGAGTTCATTGCCAGTCTAA
1 GCATACGGAGTTCATTGCCAGTCTAA
13680658 CATCCGACCG
Statistics
Matches: 25, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.27, C:0.23, G:0.21, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTGCCAGTCTAA
Found at i:13681550 original size:26 final size:26
Alignment explanation
Indices: 13681513--13681565 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13681503 GTTGACTTAG
* *
13681513 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
13681539 GCATACGAAGTTCATTCCCAATCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
13681565 G
1 G
13681566 ATCGGATTAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAATCTAA
Found at i:13682440 original size:26 final size:26
Alignment explanation
Indices: 13682404--13682455 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
13682394 TTGACTTAGG
13682404 CATACGGAGTTCATTCCCAGTCTAAC
1 CATACGGAGTTCATTCCCAGTCTAAC
*
13682430 CATACGGAGTTCATTGCCAGTCTAAC
1 CATACGGAGTTCATTCCCAGTCTAAC
13682456 ATCCGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.29, G:0.17, T:0.27
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAGTCTAAC
Found at i:13683279 original size:26 final size:26
Alignment explanation
Indices: 13683249--13683298 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
13683239 GTTGACTTAG
*
13683249 GCATACGGAGTTCATTCCCAGTCTCA
1 GCATACGAAGTTCATTCCCAGTCTCA
13683275 GCATACGAAGTTCATTCCCAGTCT
1 GCATACGAAGTTCATTCCCAGTCT
13683299 AAGATCGGAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.30, G:0.18, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTCA
Found at i:13684170 original size:26 final size:26
Alignment explanation
Indices: 13684140--13684192 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13684130 GTTGACTTAG
13684140 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13684166 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13684192 G
1 G
13684193 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13685080 original size:26 final size:26
Alignment explanation
Indices: 13685044--13685096 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13685034 GTTGACTTAG
*
13685044 GCATATGGAGTTCACTCCCAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
*
13685070 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
13685096 G
1 G
13685097 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCACTCCCAGTCTAA
Found at i:13685618 original size:901 final size:901
Alignment explanation
Indices: 13679151--13706437 Score: 18034
Period size: 902 Copynumber: 30.5 Consensus size: 901
13679141 CACCCCCTTA
* * *
13679151 AAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCTGAATTCT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* *
13679216 TTTGTGCATGCCAACAAAAATACAAGGATCCTGTCTACCAAGTTTAGGGCCAAAACTCCTTCCAA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
** * *
13679281 AAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
13679346 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
13679411 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCAACCTATCACTCTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* *
13679476 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCTCCCGTCCG---TCCGCTCGTTTCGTCGGTT
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-CCGCCCGCCGCTCGTTTCGTCGGTT
* ** * * * *
13679538 GGCTTTGGCATACAAAGTTCATTCCCAGTCTAAGATTAGACCGGACCAAGGGTTGTGCTACCAGG
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* * * * * *
13679603 ATCAGCAGCACATACAGGGGGACCCGACCGATCCCCAGCTTACGCATCCCGCCCCTCTGGCCGGC
455 ATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * *
13679668 TGAGCGGCCGCACACTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCA
520 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * * * *
13679733 TACGGAGTTCATTGCCAGTCTAACATCCGACCGGACCAAGGGTTGCGGCAGCACTTGCTGGGCTC
585 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * * * *
13679798 GAGCATGTGCTGGTGACGCATTTTTCTTCATCGAGGCACCATCGTCGGAGCATCACTAGAGAACC
650 GGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGAACC
* * *
13679863 TGACCGACGGTATTGGGGTTCTGGTGATCGGGGGGGCCGGACGGGGGGTGTGCGCACATGATGTG
715 TGACCGACGGCATTGGGGTTCCGGCGATC--GGGGG--GGACGGGGGGTGTGCGCACATGATGTG
* * *
13679928 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCGCTCAGCAAACCTCAAGAACTCAC
776 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
13679993 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTG
841 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13680054 -AATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
*
13680118 TTTGTGCATGCCAACAAAAATACAAGGATTC-TGTCTACCAAGTTTAGGGCCAAAACTCCTTCCA
66 TTTGTGCATGCCAACAAAAATACAAGGA-TCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCA
** * *
13680182 AAAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACAAGTC
130 AAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
13680247 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * *
13680312 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCAACCTATCACTCTATCGATCCACGGC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* *
13680377 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCTCCCGTCCG---TCCGCTCGTTTCGTCGGT
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-CCGCCCGCCGCTCGTTTCGTCGGT
* * * * *
13680439 TGGCTTTGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCGGACCAAGGGTTGTGCTACCAG
389 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAG
* * * * * * *
13680504 GATCAGCAGCACATACAGGGGGACCCGACCGATCCCCAGCTTACGCATCCCGCCCCTCTGGTCGG
454 GATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * *
13680569 CTGAGCGGCCGCACACTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGC
519 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * * *
13680634 ATACGGAGTTCATTGCCAGTCTAACATCCGACCGGACCAAGGGTTGCGGCAGCACTTGCTGGGCT
584 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
* * * * *
13680699 CGAGCATGTGCTGGTGACGCATTTTTCTTCATCGAGGCACCATCGTCGGAGCATCACTAGAGAAC
649 CGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGAAC
* * *
13680764 CTGACCGACGGTATTGGGGTTCTGGTGATCGGGGGGGCCGGACGGGGGGTGTGCGCACATGATGT
714 CTGACCGACGGCATTGGGGTTCCGGCGATC--GGGGG--GGACGGGGGGTGTGCGCACATGATGT
*
13680829 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAGCTCGAGAACTCA
775 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
13680894 C-TCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
840 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13680955 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTACGGGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * *
13681020 GTTT-TGCATGCCAACAAAAATACAAGGATC-TCATCTAACAAGTGTGGCGCCAAAAATCCTTCG
66 -TTTGTGCATGCCAACAAAAATACAAGGATCAT-GTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* *
13681083 AAAAAAAATTTAAAAAATCTCAAACCGCAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGT
129 AAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
* *
13681148 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGAGACCATTGTATGAATCTACAAAG-CATTAA
194 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC-AAGCCA-TAA
* * * *
13681212 AAATTGCATTGGCATACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTTTCGATCCAT
257 AAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * ** * * *
13681277 AGCTTACGCATCTCGTCTCTCTGGCCGACGTAGTGATCGCCCGCCCACCCGCCCGCTCATTTCAT
322 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-CCGCCCG-CCGCTCGTTTCGT
* * * * *
13681342 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACCGAGGGTTGTGGCA
385 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTA
* * * * * * ** * *
13681407 ACAGGATTGGTAGCACGCAGAGGGAGACCTGGCCGATCCTTGGCTTGTGCATCCTGCCCCTCTGG
450 GCAGGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * *
13681472 CCGACTGAGCGCCCGCACGCTCGATTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
515 CCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * *** * * *
13681537 AAGCATACGAAGTTCATTCCCAATCTAAGATCGGATTAGACCGAAGGTTGCGACAGGACATGCTG
580 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTG
* * * **
13681602 GGCTCGGGCATGTGCTGGTGTCACATTTTTCTTCGTCGGGGCACCATCGTCGAGGCAT-TGTCGG
645 GGCTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACT-GG
* ** * * *
13681666 AGAACCTAACCGACGGCATTCAGG-TCTCGACGATCGGGGGCGCCGGGGGGGTGTGCGCACATGA
709 AGAACCTGACCGACGGCATTGGGGTTC-CGGCGATCGGGGGGGAC-GGGGGGTGTGCGCACATGA
* * * * *
13681730 TGTGCAATGGGTGCTGGTACTTAGCCCTTATATTTGCCCCCTATCCCTCAGCAAACCTCGATAAC
772 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
13681795 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT-CATGCCAGTAGCCAATAAAGTGTCT
837 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC-TGCCAGTAGCCATTAAAGTGTCT
13681859 G
901 G
* * * *
13681860 -AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTTTACACTTCAATTTTTTAGCTTAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * ** *
13681924 TTTGGGCATGCCAAAAAAAATACAAGGATCCCGTCTA-C----TTGGGGCCAAAACTCCTTCCCA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * *
13681984 AAAAATTTTCAAAAATC-CTGAACTGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
131 AAAAATTTTAAAAAATCTC-AAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
*
13682048 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
**
13682113 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
13682178 TTGCGCATCCCGTCTCTCTGGCCGACGTAGT----GCCCTCC-CAC-CCGTTTGTTTCGTCGGTT
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTT
* ** ** * *
13682237 GGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAAACTGAGGGTTACGGTAGTAGG
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* * * * *
13682302 ATCGGTAGCACATAGAGGGGGACCCGACTGATCCCCGGCTTGCGCATCCTGCCCCTTTGGCTGGC
455 ATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * *
13682367 TAAGCGGCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAACCA
520 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * * * * *
13682432 TACGGAGTTCATTGCCAGTCTAACATCCGACCAGACCGAGGGTTGCGACAGCACATGTTGGGCTC
585 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * * *
13682497 GGGCATGTGTTGGTGACGCATTTTTCTTCGTCGGGGCACAATCATCG-AGCAT---TCGAG-A-C
650 GGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGAACC
* * * ** **
13682556 TGA-CGACGACATATTGGG-TCC-GTGATC--CAGCCACGGGGGGTGTGCGC-CATGATGTGCGA
715 TGACCGACGGCAT-TGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCGA
* * *
13682615 TGAGTGCT-G-ACTT-G-CCTTATATT-GCGCCCC-ATCCCTCATCAAACCTTGAGAAATCATC-
779 TGGGTGCTGGTACTTGGCCCTTATATTGGC-CCCCTATCCCTCATCAAACCTCGAGAACTCA-CA
*** * * *
13682673 GGTCGTT----ATCATTTGAGATTTT-CAGG-TTG-TGCCAGTA-ACATT-AAGTGTCTG
842 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
13682724 -AATGGGGACAC-TTTTTCAGATGG-CAC--AATCTTGTACAACTT-GAG---TTA-CTGAATTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC-ACTTCGAGTTTTTAGCTGAATTT
* * * * * *
13682779 TTTTGTGAAT--TATC--TAA-AC--GG---A----TA-CAAG-TT-GGG-CAAAAATCCTT-CG
65 TTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCA
* ** *
13682825 GAAAAATTCAAAAAAATCTCAACCCG-AAAAA--TTC-AAAATCATG-AAAAT-GAAAACGAGTC
130 AAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* *
13682884 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGAGACCATTGTATGAATCTACAAAG-CATTAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC-AAGCCA-TAAA
** ** * *
13682948 AATGGCATTGGCATGCAGAAAATATGAAGATGTGCCTAAACTGATCTACCACCCTATCGATCCAT
258 AATGGCATTGGCACACAG-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * ** *
13683013 AGCTTGTGCATCCCGTCTCTCTGGCCGGCGTAGTGATCGCCCGCCCCGCCCTCCCGCTCGTTTCG
322 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG--CCGCCC-GCCGCTCGTTTCG
* * ** * *
13683078 TCGGTTGGCTTAGGCATACGAAGTTCATTCCCTGTCTAAGATCAGACCGGACTGAGGGTTGCAGC
384 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGT
* * * *
13683143 AGCAGGATCGATAGCACGCAGAGGGGGACCCGACCGAT-CCCAGCTTGTGCATCCCGCCCCTCTG
449 AGCAGGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* *
13683207 GCCGGCTTAGCGCCCGCACGCTCGTTTCATGTGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
514 GCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * ** *
13683272 TCAGCATACGAAGTTCATTCCCAGTCTAAGATCGGACATGACCGAGGGTTGTGGCAGCACATGCT
579 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT
* * * *
13683337 GGGCTCGGGCATGTTCTGGTGCCGCATTTTTCTTTGCCGGGGCACCATCGTC--A--A--AC---
644 GGGCTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGG
* * * * *
13683393 --AACCAGACCGAAGACATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGTGTGCGCACATGATG
709 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATG
*
13683456 TGCGATGGGTGCTGGTACTTTGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
774 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* ** *
13683521 ACACCCCCTTAAACAGCATTTGAGATTTTACAGGTTTTTTGCCGGTAGCCATTAAAGTGTCTG
839 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13683584 GAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTTTACACTTCGAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * * ***
13683649 TTTATGCATTCCAACAAAAATTCAAGGATCACGTCTACCAAGTTTGGGGCTAAAAATCCTTTTGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * * * ** *
13683714 AAAAATTTTAAAGAGTTTCGATAA--GTAAAAATTTTTGAAAATCGTGAAAAATAGAAAACGAGT
131 AAAAATTTTAAAAAATCTC-A-AACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
* * *
13683777 CGTCTTGCCATTAAACTTCACGTGAAGGCTTAAGGGTCCATTTTATGAATTTACAAGCCATAAAA
194 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * *
13683842 ATGGCATTGCCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCATGG
259 ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * ** * *
13683907 CTTGCGCATCCCGTCTCTCTAGTCGGCGTAACGCCCACTCGCC-CACTCGCCCGCTCGTTTCGTC
324 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGC-C-CG-CCGCTCGTTTCGTC
* * * *
13683971 GGTTGGCTTAGGCATACAGACTTGATTCCCAGTCTAGGATCAGACCGGACCAAGGGTTGCGGTAG
386 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAG
** ** * ** * * *
13684036 TCA-GATCAATAGCATGCAGAAGGGGAGTCGACCGAT-CCCGACTTGCGCATGCCGCCCCTTTGG
451 -CAGGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * *
13684099 CTGGCTGAGTGCCCTCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
515 CCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* *
13684164 AAGCATACGGAGTTCATTCCCAGTGTAAGATCGGACCGGACCGAGGGTTGCGGTAGCACATGCTG
580 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTG
* * * * * ** * *
13684229 GGCCCGGGCATGTGCTTGTGCCGTATTTTTCTTCGTCGAGGCACCATCACCGGAGCATCACCGGA
645 GGCTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGA
* * *
13684294 GAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTCTGCGCACATGAT
710 GAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGAC--GGGGGGTGTGCGCACATGAT
* *
13684359 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCCATCCCTCATCAAACCTTGAGAACT
773 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
*
13684424 CACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
838 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
13684488 AAATGGGGACACTTTCTTCAAAGGGTCACATAATCTTGTACACTTCAAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
13684553 TTTATGCATGCCAAGAAAATTACAAGGATCATGTCTACCAAGTTTGGGCCCAAGACTCCTTCCAA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* *
13684618 AAAAATTTTAAAAAATCTCAAACAGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
*
13684683 TCTTGCCATGAAACTTCACGTGAAGGCATAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* ** * * *
13684748 GGCATTCGCACGTAGAAATATGAAGATGTACCTAAACCCACCAACCACCCTATCGACCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * * *
13684813 TGCGCATCCCGTCTTTCTGGCCGGCGTAGTGCCCGGCCGTCGACCCGAACACTCGATTCGTCGGT
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCG-CCCG-CCGCTCGTTTCGTCGGT
* * * * *
13684878 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGA-GGTTGCGGAAGCAA
389 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAG
* * * ** *
13684942 GATCGGCAGCATACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCATCCCTCTGGCCGA
454 GATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * *
13685007 CTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCACTCCCAGTCTAAGC
519 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
**
13685072 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCACCAGCACATGCTGGGCT
584 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
* * ** ** *
13685137 CGAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCTTCATCGTCGAAGCATCGCTGGAGAAC
649 CGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGAAC
* *
13685202 CTGACCGACGGCATTGGGGTTCCGGCGATC-GGGGGGTCGGGGGGTGTGCACACATGATGTGCGA
714 CTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCGA
* *
13685266 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTTGAGAACTCACACC
779 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
13685331 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-TAG
844 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-G
* *
13685389 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAGTTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
13685454 TTTGTGCATGCCAACAAAAACACAAGGATCATGTCTACAAAGTTTGGGGCCAAAACTCCTTCGAA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * *
13685519 ACAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGTGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* **
13685584 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTATGAATTTACAAGCTGTAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
13685649 GGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACAGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
13685714 TGCGCATCCCGTCTCTCTGGCC-AGCGTAGTGCCCGCCCGCCCGCCCGCTTGGTCATTTCGTCGG
326 TGCGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCG-CCGCCCGC-CGCTCGTTTCGTCGG
** * * *
13685778 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGTGGCAGCA
388 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCA
** * ** *
13685843 GGATCGGTAGCATGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTACCCCTCTGGCCA
453 GGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * ** * * * *
13685908 GTTGAGCACCCGCAATCTCATTTCGTGAGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAG
518 GCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * *
13685973 CATACGGAGTTCATTCCCAGTCTATGATCGTATCGAACCGAGGCACCATTGTCGG-AGCATCA--
583 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGG----GTTG-CGGCAGCA-CATG
* * * ******* *** ** *
13686035 CCGGAGAACCTGATCGGCGACATTGGGGTTCTGGCGATCGGGGGGGGCCGGGGGGGTGTGCGCAC
642 CTGG-G---C---TCGG-G-CA-T---GTGCTGGTGA-CGCATTTTTCTTCGTCGG-G-GCAC-C
* * ** * * * *** ** ** *
13686100 ATGATGTGCGATGGGT-GCT-GA-TACCTGGCC--CTTATATTGGCCCCCTATCCCTCATCAAAC
690 AT--CGT-CGAAGCATCACTGGAGAACCTGACCGAC-GGCATTGG---GGT-T--C-CGGC-GA-
***** ****** * * * * ** * *
13686160 CTCGAGAACTCACACCCCCT-TAAAGAGCATTTCA-GATTTTAC-A-GGTTTGCTGCCA-GTAGC
742 -TCG-GGGGGGACGGGGGGTGT---GCGCA---CATGA-TGTGCGATGG-GTGCTGGTACTTGGC
* * * * **** **** ***** * *** ** *
13686220 CATTAAAGT-GTCTGAAATGGGGACAT-TTTTTTC-A-AATGGTCACA-AATCTTGTACA-C-TT
797 CCTTATATTGGCCCCCTAT-CCCTCATCAAACCTCGAGAA--CTCACACCCCCTTAAAGAGCATT
* ** ** ** * ** **
13686278 CGATTTTTTAGCTGAATTTTTTTGTGCA-T-GCCAACAAA--AAC--
859 TGAGATTTTA-C--AGGTTTGCTG-CCAGTAGCCATTAAAGTGTCTG
* * * ** ** * * * * ** *
13686319 AAA--AGGATCACGTCTACCTAGTTTGGGGC-CAAAACTCCTTCTGAAAAAATTTTAAAAATTTT
1 AAATGGGGA-CACTTTTTTC-A-AAT-GGTCACAAAA-T-C-T-TG--TACA-CTT-CGAGTTTT
* * * *** ***** ** * * * * * *** *
13686381 GGAATCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG-TCTTGCCTTGAAACTTC
54 --TAGC-TGAATTTTTTTGTGCAT-GCCAACAA-A-AATACAAG--GATCATGTCTACCAAGTT-
* * * * * * *** ** ** * *
13686445 ATGTGAAGGCTTAAGGGACCATCGTAT-GAATTTACAA-GCCATAAAAATGGCATTGTCACGTAG
110 -TG-G--GGC-CAA---AAC-TCCT-TCCAA--AAAAATTTTA-AAAAATCTCA--AAC-CGCAA
* * ** * * * * * * * **
13686508 AAA-TATGAAGATGTGCCT-AAACCCACCTACCATCCTATCGA-TCCACGGCTTGTGCAT--CCC
159 AAAGTTTCAA-AAAT-CATGAAA---A-ATA-GA---AAACGAGT---CGTCTTG-CCATGAAAC
* ** * * ** **
13686568 GTCTCTC-TGGTCGGCTT-AGTGCCCGCCCGATGGT-TGCGGTAATAGGATCAACAGCACGCAGA
210 -T-TCACGT-GAAGGCTTAAG-G---GACC-ATTGTAT---G-AAT-TTA-C-A-AGC-CATA-A
**** ** ** ** * *
13686630 GGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
257 AAATGG-C----ATTG-GCACACA-GAAAT---AT-GAAGAT-G----T-G-CC-TA-A---ACC
* * * * * * ** *** **
13686695 C-CCTA--TCCCTCATCAAACCTCGAGAAC-T-CACA-CCC-CCT-TAAAGAGCATTTCAGATTT
299 CACCTACCACCCT-ATCGATCCACG-G--CTTGCGCATCCCGTCTCT-CTG-GC-CGAC-G-TAG
* ** *** * * ** ** ** *** * * * **** ***
13686752 TACAGGTTTGCTGCCAGTAGC-AATTAAAGT--GTCTGAAATGGGGACACTTTTTTCAAATGGTC
355 TGCCCGCCCGCCGCCCGCCGCTCGTT-TCGTCGGT-TGGCTTAGGCATACGGAGTTC--ATTCCC
*** ** * **
13686814 A--CTAA-ATCTAGTATTCTTCGAGTTTTTACCTGAATTTTTTTGTGCACGCCAAAAAAAATACA
416 AGTCTAAGATC-AG-A--C--CG-G-----ACC--AAGGGTTGCG-GTA-G-C----AGGAT-C-
* ** ** ****** **** * *
13686876 AGGATCA-CATCTACCA-AGGTTGGGGCCTAAACTCCTTCAAAAAAAATTTTAAAAAATCTCGAA
458 -GG-T-AGCA-C-A-CAGAGG--GGGACC-CGAC-CGATC----CCCGGCTT-GCGCATCCCG-C
* ** * * * ****** * * *** * * ** *
13686939 CCGTAAAAAGTTCTGAAAACTATGAAAAATAGAAAACGAGTAACTTCACGTGAAGGCTTAAGAG-
507 CCCT---CTG-GCCG---GC--TGAGCGCCCG--CACG-CTCGTTTCATGGGTTGACTT-AG-GC
* * ** * * * * * ** * ** * *
13687003 ACCACTGTA-TGAATTTACAAGCCATAA--AAATGGCCTTGGCATGCAGAAATATGAAGAT-GTG
558 A-TAC-GGAGTTCA-TTCCCAGTC-TAAGCATACGGAGTT--CATTC-CCAGTCT-AAGATCG-G
** * ** ** ** ** * * ** * * * * * *
13687064 -CCTAAACCCA-CCTACCACCCTCTCGATCCACGGCTTGCGCATCTCGTCT-CTCTA-G-ATGGT
614 ACC-GGACCGAGGGTTGCGGCAGCAC-ATGCTGGGCTCGGGCATGT-G-CTGGT-GACGCAT-TT
* ** * * ** * *** ** * * * ** **
13687124 GTAGT-GCCCGCCCGCC--CGCTCGTTTCAT--C-GGTCAGCTTAGGCATACGG-AGTT--CATT
673 TTCTTCGTCGGGGCACCATCG-TCGAAGCATCACTGGAGAACCT-GACCGACGGCA-TTGGGGTT
* * **** * * * * *
13687180 CCTAGTCTAAGATTGGACCAGACTGAGAGTTGTG-GCAGCAGGATCACCAGCATGCAGA-GGGGG
735 CC--GGC---GATCGGGGGGGAC-GGGGGGTGTGCGCA-CATGAT-----G--TGC-GATGGGTG
** * * **** * ** ** * * *
13687243 ACCCG-A-TCGATCCC-CGGCTTGTGCATCCC-GCCCCTTTGGTC-GA-CT-GAGCACCCACACG
785 -CTGGTACTTG-GCCCTTATATTG-GC-CCCCTATCCC--TCATCAAACCTCGAGAACTCACAC-
* * ** * ** * * * * **
13687301 CTCGTT-TCGTG-GGTTGA-CTTAGGCATAC-GGAGTT-CATTCTCAGTCTAAG-CATATGGAGT
843 CCCCTTAAAGAGCATTTGAGATT----TTACAGG-TTTGC-TGC-CAG--T-AGCCAT-TAAAGT
*
13687360 -TCATTCCC
897 GTC--T--G
* *** * ** ** * * ** * *
13687368 AATCTAAGCATACGGAGTTCATTCCCA--GTC-TAAGATCAGACCGGACCAAGGGTTGCGGCAGC
1 AA---ATGGGGAC--ACTTTTTTCAAATGGTCACAAAATC---TTGTA-C-A--CTT-C-G-AG-
** ** **** * * ******* * * * *
13687430 ACATGCTGGGCTCG-GGCATGTGGTG-ATGTCGCATTTTTCTTTGCCGAGGCACCA--TCGT-CG
50 ---TTTTTAGCT-GAATTTTTTTGTGCATG-C-CA-ACAAAAAT-ACAAGG-ATCATGTC-TACC
* * * * * * ** * ** ** ***** ***
13687490 GAGTATCGTCGG--AGAA--CCTGACCGACGACATTGGGGTTCTGACGATCGGGGGGCC-CGGGG
105 AAGT-TTG-GGGCCAAAACTCCT-TCCAAAAAAATT----TT-AAAAAATC-TCAAACCGC-AAA
** * * * * **** * * * * * * * *
13687550 GGGTGTGCACACATGATGTGCGAT-G----GGTGCTGGTACTTGGCCCTTATA-TTGGCCCCCT-
160 AAGT-TTCAAAAATCATGAAAAATAGAAAACGAG-TCGT-CTT-GCCATGAAACTT---CACGTG
*** * **** * * * ** * * * *
13687608 ATCCCTCATCAAACC-TCG-A-GAACTCACACCCCCT--TAATGAGCATTTGAG-ATTTGACAGG
218 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG-GCA-TTG-GCA---CACAGA
** * * *** ***** ** * ***
13687667 TTTGCTGTCAGTAGCCATTAATGTGTCTGAAATGGGGACACTTTTTTCAAAT-GGTCACAAAAAC
277 AAT-ATG--A--AG------ATGTGCCT-AAA--CCCAC-CTACCACCCTATCGATC-C-ACGGC
** * * * ** * * ** **** * *** * **
13687731 TTGTACACTCCGAGT-T-TTTAGTTGAATTTTGTTGTGCGTGCCAACAAAAACACAAGGATCGCG
325 TTGCGCA-TCC-CGTCTCTCTGGCCG-A---CGTAGTGCCCGCC--C-GCCGCCCGCCGCTCGTT
* * **** **** * * * * *
13687794 TC-TACCAAGTTTGG----GGCCAAAACTCCTTTCGA-AAAAATTTTAAAAAATCCTGAACGGTA
381 TCGT--C--GGTTGGCTTAGG-C-ATACGGAGTTC-ATTCCCAGTCT--AAGAT-CAGACCGG-A
** * * *** * ** **
13687853 --AAAAGTTTC-G-A--A-AATC-GT-G-A-A-A-AATAGAAAACGA--G-T---CATCTTGC-C
435 CCAAGGGTTGCGGTAGCAGGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGC
**** ** * ** * * ** * * *
13687898 ATTAAACTTCAC-GTGAAGGCTTAAG-G---G-AC-CAT--TGT-ATGAATTTAC-AAGCCATA-
500 ATCCCGCCCCTCTG-GCCGGC-TGAGCGCCCGCACGC-TCGTTTCATGGGTTGACTTAGGCATAC
** * * ** ** * * * ** * ** * ** * *
13687951 AAAATGGCATTGGCA-T-GGAGAAATATGAAGATGTGCCTAAACCCA-CCTACCACCCTATC-AA
562 GGAGT-TCATTCCCAGTCTAAG-CATACG--GA-GT-TC-ATTCCCAGTCTAAGATCGGACCGGA
** * * * * * ** * *
13688012 TCC-ACGACTTGC-GCATCCCGTCTCTCTGGC-CGGTG--TGGTGCCCGTCCGCCCGC-TCGTTT
620 -CCGA-GGGTTGCGGCAGCACAT-GCT-GGGCTCGG-GCAT-GTGCTGGT--G-ACGCAT-TTTT
* * * ** ** * * * ***
13688071 CATCGGTCGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAAACCAAGAGTTACG
675 CTTC-GTCGG----GGC--AC-CA--TC-GTCGAAG-C-ATCACTGGA--GAACC-TGACCGACG
*** * * * * * ** * *** * *** * * ** *
13688136 GTGGTAGGATCGCCAGC-TTGCAAAGAGGGACCTGATCGATCCCCGGCATACGCATCCCGCCCCT
724 GCATTGGGGT-TCCGGCGAT-C-GGGGGGGA-C-GGGGGGTGTGC-GCACATG-AT---G-TGCG
* * *** * * **** ** ** * **
13688200 CTGGCCG-GCTGAGCAC-CCACACGCTCAT-TTCG-TGGGT-TGACT--T-AGGCATACG-GAGT
778 ATGG--GTGCTG-GTACTTGGC-C-CTTATATTGGCCCCCTATCCCTCATCAAACCT-CGAGAAC
** ** * * * * *
13688256 TCATTCCCAGTCT--A-AGCATATG-GAGTTCATTCCCA-GTCTAAGCAT-ACAG-AGTTCATTC
837 TCACACCCCCT-TAAAGAGCATTTGAGA-TT--TT-ACAGGT-T-TGC-TGCCAGTAG-CCATT-
**
13688314 CCA--GTCT-
892 AAAGTGTCTG
*** * * *** * ** * **
13688321 AAGATCGGACCGGAC-CGAGGGTTACGACA--G-CACATGCTGGGCTCGGGCA-TGCG-G-TGGT
1 AA-AT-GG---GGACAC--TTTTTTC-AAATGGTCACAAAAT---CTTGTACACTTCGAGTTTTT
* * * * * ** ** * * * *
13688379 -GCCGCATTTTTCTT-TGCCGAGGCACTATCGCCGGAGCAT-CGTCGGAGAACCTGACTGACGAC
55 AGCTGAATTTTT-TTGTG-C-ATGC-C-A---AC-AAAAATAC--AAG-GATCATGTCT-ACCA-
* *** *** ******* * ** * * * *** * ** *
13688441 A--TTGAGGTTCCGTTGA-TCGGGGGGCCCGGGGGGTGTGCACACA--T-GATGTGC-GATGGGT
106 AGTTTG-GG-GCC-AAAACTC---CTTCCAAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTT
* **** * **** * * ** * ** * * * * * *
13688499 GCTGGTA-CGTG-GCCCT-TATATTG-GCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCC
165 TCAAAAATCATGAAAAATAGAAAACGAGTCGTCT-T-GC-CATGAAACTTCACG---TGA-A--G
* * * * * * * * * *
13688560 CCTTAA-AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG-
221 GCTTAAGGGACCA-TT--G-TATGA-A---TT--T-ACA--AGCCATAAAAATG---GCATTGGC
** *** * * * * ** * * *** * ****
13688623 GGACAGTTTTTTCAA-ATGGTCCCAAAATCTTGTACACTTCTAGTTTTTAGTTGAATTTTTTTGT
270 ACACAGAAATATGAAGAT-GTGCCTAAA-C--CCAC-CTACCA--CCCTA-TCG-A--TCCACG-
* * * * * *
13688687 GCATGACAAGCAAAATACAAGGATCACGTCTACCAAGTTTGGGACCAAAACTTCTAAAAAAATTA
323 GCTTG-C--GC---AT-C------C-CGTCT--C---TCT-GG-CC--GAC--GT------AGTG
******** ** * ***** * *** ** * *
13688752 TAAAAAATCCTTAACCACAAAAAGTTTCAAAAATC-G-TGAAAAATA-AAAAAC-GAATCGTC-T
357 CCCGCCCGCC--GCCCGCCGCTCGTTTC----GTCGGTTG--GCTTAGGCATACGGAGT--TCAT
* ** ** * ** * * * *
13688812 TGCCA-TGAAACTTC--A-CGTG---AAGGCTTAAGGTACCATTGTAT-GAATTTACAAGCCATA
412 TCCCAGTCTAAGATCAGACCG-GACCAAGGGTTGCGGTAGCA--GGATCG---GT---AG-CACA
* * * * * *** **** ** * * *
13688869 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCA-CCTAC-CACCCTATCGATC
467 CAGA-GG----GGGA-CCCGACCGAT--CCCCG-G-CT-TGCGCATCC--CGC-CCCTCT-G-GC
* *** * * ** * ** ** **
13688932 C-AC--AGCTTGCGCA-TCTCGCCTCTC-T-GGCCGACATAGTGCCAGCCTGCTCGTT--TTGTC
516 CGGCTGAGCGCCCGCACGCTCG--TTTCATGGGTTGACTTAG-G-CATAC-G-GAGTTCATTCCC
* * * * *
13688989 GGTTGGCTTAGGCATAGGGAGTTCATTCCTAGTCTAAGATCGGACCGGACTGAGGGTTGCGGCAG
575 AG-T--C-TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAG
* * ** * * ** * * ** * * *
13689054 CAGGATCAGCAGCACATAGAGGGGGACCTGACCGATCCCCGGC-TTGTGCGTCTCGCCCCTCTGG
636 CA-CAT--GCTGGGC-T---CGGGCATGTG-CTGGT-GAC-GCATTTTTC-T-TCG----TCGGG
* * * * ** * * * * * ** **
13689118 CCAGCTGAGCGCCCGCCCGC-TCTTTTCGTCGGTTG-GCTTAGGCATACGG-AGTT--CATTCCC
685 GCA-C-CATCG-TCG-AAGCATC---AC-T-GG-AGAACCT-GACCGACGGCA-TTGGGGTT-CC
* *** * * * * ** **** * ***
13689178 AGTCTAAGATCGGATCGGACCGAGGGT-TACGGCAGCAGGATCAGC-A-GCACAC-AG-AGGGGG
737 -GGC---GATCGGGGGGGACGGGGGGTGTGC-GCA-CATGATGTGCGATGGGTGCTGGTACTTGG
** * *** ** ** * * * * *
13689238 ACCC--A-ACCGATCCCCGGGT-TGTGCATCTAGCCCCTCTG-GCCAGCTGAGCGCCCGC---AC
796 -CCCTTATATTG-GCCCCCTATCCCT-CATC-A-AACCTC-GAG--AACTCA-CACCCCCTTAAA
** *
13689295 GTTCATTT-CG---TT---GGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
852 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13689338 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAGTTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * *
13689403 CTTGTGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-CCATTCCG
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCA
* * * ** * * *
13689467 AACAAATTTTAAAAAATC-CTAAGCCGCGAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGACT
130 AAAAAATTTTAAAAAATCTC-AAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
13689531 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAA
194 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * *
13689595 ATGGCATTGGCACACAAAAATATGAAGATGTACCCAAACCCACCTACCA-CCTATCGATCCACGG
259 ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * *
13689659 CTTGTGCATCCTGTCTCTCTGGCTGACGTAGTGCCCG-CC-CC-CCCGTCCGCTCGTTTCATCGG
324 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCG-CCGCTCGTTTCGTCGG
* * * *
13689721 TTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCA
388 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCA
* * * * * * ** * *
13689786 GGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGACTTGTGAATTTCG-CCCTCCGGCTG
453 GGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * ** *
13689850 GTTGAGCGCCTGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAG
518 GCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* ** **
13689915 CATACAGAGTTCATTCTTAGTCTAAGATCGGACC-GACCCGAGGGTTGAAGCAGCACATGCTGGG
583 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGA-CCGAGGGTTGCGGCAGCACATGCTGGG
*
13689979 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCA---TC---G--T--C-GGAGA
647 CTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGA
* * * * * *
13690033 ACCTGACCGACGGTATTGGGGTTTCGACGATCGGGGGGG-CTGGGTGGTGTGCGTACATGATGTA
712 ACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGAC-GGGGGGTGTGCGCACATGATGTG
* * *
13690097 CGATGGGTGCTTGTACTTGGCCCTTATATTGGCCCCCTATCGCTCATCAAACCTCGAGAAGTCAC
776 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
13690162 TCCCACTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
841 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
13690223 AAATGGTGACACTCTTTTCAAATGGTCACAAAAACTTGTACACTTCGAGTTTCTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * **
13690288 TTTATGCATGCCAACAAAACTACAAGGATCACGTCTACCAAGTTTGGGGTGAAAACTCCTTCCAA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
** * * * *
13690353 AAAAA-TTTAAAAAATCTTGAACCACAAAAAGTTTCAAAAATCGTGAAAAGTAGAAAACGAGTGG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
13690417 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** * *
13690482 GGCATTGGCATGCAGAAATATGAAGAAGTGTCTAAACCCACCTACCACCCTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
13690547 TGCACATCCCGTCTCTCTGGCGGACGTAGTGCCTG--C-CCGCCCGCCTGCTCGTTTCGTCGGTT
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCC-GCTCGTTTCGTCGGTT
* ** * * ** *
13690609 GGATTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCTGACCGAGGGTTGTAGTAGCAAG
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* * ** * * ** *
13690674 ATCAGCAGCAGGCAGAGGGGGACCCGGCCGATCCCCGACTTATGCATCCCGCCCCCCTGGCCGGC
455 ATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
** * ** * *
13690739 TGAGCGCCCGTGCGCTCATTTTGTGGGTTGACTTAGGCATACGGAGTTTATTTCCAGTCTAAGCA
520 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * * ** *
13690804 TCCAGAGTTCATTTCCAG-CTAAGATCAAACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
585 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * * * * * ***
13690868 AGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCTCCATCGTCGGAGGATCGCCAAAGAACC
650 GGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGAACC
* * * * * * * * * *
13690933 TGACTGGCGGCTTTGGGATTTCGACGATCTGGGGGGCCGGGGGGTGTGCTCACATGATGTGCGTT
715 TGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCGAT
* * *
13690998 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAGCCTTGGGAACTCACACCC
780 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
13691063 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
845 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
13691120 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * **
13691185 TTTGTGCATACCAACAAAAATACAAGGATCACGTCTACCAAGTTAGGGGCCAAAACGT-CTTCTG
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAC-TCCTTCCA
* ** ** * *
13691249 AAAAATTTTTAAAAAATCTTGAACCGCAAAAAGTTTTGAAAATCTTGAAAAATAGAAAATGAGTC
130 AAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* **
13691314 GTCTTGCCATGAAACTTCACGTCAAGGCTTAAGGGACCATTGTACAAATTTACAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
**
13691379 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * * * *
13691444 TTACGCATCCTGCCTCTCTGGTCGACGTAGAGCCCG--C-CCG--C-CCACTCGTTTCATCGGTT
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTT
* * * ** * ** * * * *
13691503 GGATTAGGTATACGGAGTTCATTCCCA-TCTCAGATTGGATCGGACTGAGGGTTACAGCAGCAAG
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* * *
13691567 ATC-G-ACGACACGCAGAGGGGGACCCGACCGATCCCCGGTTTGCGCATCCCGCCACTCTGGCCG
455 ATCGGTA-G-CACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* *
13691630 ACTAAGCGCCCGCACGCTCGTTTCATGGGTTGAC-T-----TA--G-G--------CA---T-A-
518 GCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * **
13691673 C--A--GAGTTCATTCCCAGTTTAAGATCGGACTGGACTGAGGGTTACGATAGCACATGCTGGGC
583 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * * * * *
13691734 TCGAGCATGTGCTGGTGCCGTATTTTTCTTC-ACCGGGC-CC--CATC---GC--CA-T--AGAA
648 TCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGAA
* *** * * *
13691787 CCTGACCGGCGGCATTGGGGTTCCAATGATCGGGGGGGCCAGGGGGTGT-CGCACATGATGTGTG
713 CCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCG
*
13691851 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
778 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * *
13691916 CCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCAATTAAAGTGTCAG
843 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
13691975 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* *
13692040 TTTGTGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-A
* * * * ** * *
13692105 AAAAATTTTTAAAAAATCCCGACCCATAAAAAGTTTCAGAAATCGTGAAAAATAGAAAACGAGTC
130 AAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
*
13692170 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGTACCATTGTATGAATTTACAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
** * * *
13692235 TGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCATGAC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
13692300 TTGCGCATCCTGTCTCTCTGGCCGACGTAGTGCCCGCTCGCCCGCCCGCCCGCTCATTTCATCGG
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-CCGCCCG-CCGCTCGTTTCGTCGG
* * * * * *** * * * *
13692365 TTGGGTTAGGCAAACAGAGTTCATTCCCAGTCTAAGATCGGGCCGGAATGAGTGTTGTGGCAACA
388 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCA
* * * * * ** ** * *
13692430 GGATCGGCAGCACGCAAAGTGGGACCCGACCTATCCCTAGCTTGCGCATCCCAACCCTTTGGTCG
453 GGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * *
13692495 GCTAAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGTAGTTCATTCCCAGTCTAAG
518 GCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * * * * * *
13692560 CATACAGAGTTGATTCCCATTATAAGATCAGACCAGACCAAGGGTTGCAGCAGCACATGATGGGC
583 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * * * * *
13692625 TCGGGCATTTGCTGGTGTCGCATTTTTCTTTGTCGGGGCACCATCGCCGGAGCATCGCCT-GAGA
648 TCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATC-ACTGGAGA
* * * * * *
13692689 GCCTGACCGCCAGCATTGGGGTTCAAGG-GAAC-GGGGGGACCGGGGGGTGTGCGCAAATGATGT
712 ACCTGACCGACGGCATTGGGGTTC-CGGCGATCGGGGGGGA-CGGGGGGTGTGCGCACATGATGT
* * *
13692752 CCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCA
775 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
13692817 CA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGTCAGTAGCCATTAATGTGTCTG
840 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
13692878 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCTAAATTGT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
13692943 TTTGTGCATGCCAACAAAAACACAATGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCCA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * * ** *
13693008 AAAAATTTTAAAAAATCCCGAACTGCAAAAAATTT-TGAAAT--TGTAAAATATAGAAAATGAGT
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATG-AAAA-ATAGAAAACGAGT
* *
13693070 CGTCTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCATTGCATGAATTTACAAGCCATAAAA
194 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
** * *
13693135 ATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCAACTTACCACCCTATCGATCCACGG
259 ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * *
13693200 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCAGCCCACTCATTTCGTCG
324 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-CCGCCCG-CCGCTCGTTTCGTCG
* * ** * *
13693265 TTTGGCTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTTACGGCAGC
387 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGC
* ** * * *
13693330 AAGATCGGTAGCACGTAGAGGGGGACTCGGCCGATCCCCGGCTT-CGCATCCTGCCCCTCTGGCC
452 AGGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * * *
13693394 GACTTG-GCACCCGCACACTCG-TTCTGTGGGTTGAC-T-----T--GG-G--C-TT---A---T
517 GGC-TGAGCGCCCGCACGCTCGTTTC-ATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * *
13693439 --G---A---AGTTCATTCCCAGTCTAAGACCGGACTGGACCAAGGGTTGTGGCAGCACATTCTG
580 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTG
* *
13693496 GGCTCGGGCATGTGCTTGTG-CAACATTTTTCTTCGTCGGGGCACCA---TC---G--T--C-GG
645 GGCTCGGGCATGTGCTGGTGAC-GCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGG
* * * *
13693549 AGAACCTGATCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATAATG
709 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATG
* * *
13693614 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAATCCTTGAGAACTC
774 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
13693679 ACACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
839 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13693742 AAATGGGGACACTTTTTCCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* ** *
13693807 TTTGTGCGTGCCAACAAAAATACAAGGATCGCGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * ** * *
13693872 AAAAATTTTAAAACATCCCGAACCATAAAAAGTGTCAAAAATCGTGAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* *
13693937 TCTTACCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** * *
13694002 GGCATTGGCATGCACAAATATGAAGATGTGCCTAAACCCACCTACCACACTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * ** * *
13694067 TGTGCATCCCGTCTCTGTGGCCGATATAGTGCCCG--C-CCGCTCG-C-C-CGTTTCATCGGTTG
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTTG
* * ** *
13694126 GCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATGAGACCGGATGAAGGGTTGCAGTAGCAGGA
391 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGGA
* *** * * * *
13694191 TCGGCAGCGTGCAGAGGTGGACCCGACTGATCCCCGGCTTGCGCATCCCACCCC-CTGGCCGGTT
456 TCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* *
13694255 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACTGAGTTCATTCCCCGTCTAAGCAT
521 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
* ** * * * * *
13694320 ACGGAGTTCACTCCCAGTCTAAGATCAAACCAGACTGAGGGTTACGGCAGCACATGATGGGCACG
586 ACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCG
* * * * *
13694385 GGCATGTGCTGGTGCCGCATTTTTCTTCCTCGGGGCACCATCGCCGGAGCATCGCCT-GAGAACC
651 GGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATC-ACTGGAGAACC
* * * *
13694449 TGACCGACGGCATTGGGGTTCCGGTGAACGGGGGGGCCGGGGGGGTGTGCGCAAATGATGTGCGA
715 TGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGAC-GGGGGGTGTGCGCACATGATGTGCGA
13694514 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-C
779 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
* * *
13694578 CCCTTCAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAGTAGCCGTTAAAGTGTCTG
844 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
13694636 AAATGAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * **
13694701 TTTGGGCATGCCAACAAAAATACAAGGATCACGTGTACCAAGTTTGGGGCCAAAAATCTTTCTGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
*
13694766 AAAAATTTTAAAAAATCAT-AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
131 AAAAATTTTAAAAAATC-TCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
13694830 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*
13694895 TGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
*
13694960 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGG
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-CCGCCCG-CCGCTCGTTTCGTCGG
* *
13695025 TTGGCTTAGGCAGACGGAGTTCATTCCCAATCTAAGAT-----CGGACC-A--------GT---A
388 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCA
* * * * * * * * * *
13695073 GGATCGATAACACGCAGAGGGGGACCGGGCCGATCCCCGGCTTACGCATCCCACCCTTCTGGTCA
453 GGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
** * * * *
13695138 GCTGAGCGCCTACGCGCTCGTTTCGTGGGTTGACTTAAGAATACGGAGTTCATTCCCAGTCTAAG
518 GCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * * *
13695203 CATACGGAGTTCATTTCCAGTCTAAGATCGAATCGGACCCAGGGTTACGACAGCACATGCTGGGC
583 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * * * *
13695268 TAGGGCATGTGCTGGTGCCGAATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATCA-TAGGAGA
648 TCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACT-GGAGA
* * * *
13695332 ACCTGACC-AGCGCCACTGGGGTTCCGACGATCGGGGGGGCCGGGGGG-GTGCGCACATGATGTG
712 ACCTGACCGA-CGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTG
* ** *
13695395 TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCATCTATCCCTCATCAAACCTCAAGAACTCAC
776 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
13695460 ACCCACTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTA
841 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
13695521 AAATGGGGACAATTTTTTCAAATGGTCACAAAATCTTTTACATTTCGAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
13695586 TTTGTGCATCCCAACAAAAATACAAGGATCACGTCTACTAGGTTTGGGGCCAAAACTCCTTCCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * *** *
13695651 AAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGGAAATCGTGAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* *
13695716 TCTTGGCCATGAAACTTCATGTGAAGGCTTAAGGGACCACTGTATGAATTTACAAGCCATAAAAA
196 TCTT-GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
** * ** *
13695781 TGGCATTGGCACGTAGAAATATAAAGATGCACCTAAACCCACCTACCACCCTATCGATCCACGAC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
13695846 TTGCGCATCCCGTCTCTCTGGCTGACGTAGTGCCCGCCCGCCCGTCCAC-CCACTCTTTTCATCG
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG-CCG-CC-CGCCGCTCGTTTCGTCG
* ** * * * * * *
13695910 GTTGGCTCAGGCATACGGAGTTCATTCGGAGTCTAAGATCGGATCAGACCGAGGGTTGTGGCAGC
387 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGC
* * * ** * **
13695975 AAGATGGGCAGCACGTAGAGGGGGACCCGATCC-ATCCTCTCCTTGCGCATCCCGCCCCTCTGGC
452 AGGATCGGTAGCACACAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * * * *
13696039 CGGCTGAGCGCCCGCACCCTCGTTTCGTGGGATGACTTAGGCATTCGGAGTTCAGTCCCAGTCTA
516 CGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
** * *
13696104 AGCATACGGAGTTCATT-CCAGTCTAAGATCAAACCAGACTGAGGGTTGCGGCAGCACATGCTGG
581 AGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * * * *
13696168 GCTCGGGCATGTGCTGGTGCCGAATTTTTCTTCGTCGGGGCACCATTGCCGGAGCATCA-TCGGA
646 GCTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACT-GGA
* ** * * * *
13696232 GAACCTGACGGGTGGCACT-GGGTTCCGACGATC-GGGGGG-CCGGGGGTGTGCACA-AGTGATG
710 GAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACA-TGATG
*
13696293 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCGAGAACTC
774 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
13696358 ACACCCACTTAAAGAGCATTTTAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTG
839 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
13696421 AAATGGGGACAATTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTTAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * *
13696486 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACTAGGTTTGGGGCCAAAACTCCTTCCCA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* *** *
13696551 AAAAATTTTAAAAAATCTCAAACCGTAAAAAGTTTTGGAAATCGTGAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* *
13696616 TCTTGCCCTGAAACTTCACGTGAAGGCTTAAGAGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
13696681 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACGTACCACCTTATCGATCCACGACT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * ** *
13696746 TGTGCATCCCATCTCTGTGGTTGGCGTAGTGCCCGCCAACCCGCCCGCCCGTCCTGCTCGTTTCG
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG----CCCG-CCGCCCG-CC-GCTCGTTTCG
* * * *
13696811 TCGGTTGGCTTAGGCATACGTAGTTCATTCCCAATCTAAGATCAGATCGGACCAAGGGTTACGGT
384 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGT
** * * * ** * *
13696876 AGCAGGATCGACAGCACATAGAGGGGCACCCGA-CAATCCCCGGCTTGATCATCCCTCCCCTCAG
449 AGCAGGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * *
13696940 GCCAGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTT
514 GCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * ** * *
13697005 TAAGCATACAGAGTTCATTCCCAATTTAAGATCAGACTAGACCGAGGGTTACGGCAGCAAATGCT
579 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT
* * * * * * * **
13697070 GGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGTCGAGGCACCATCGCCGGAGCATCGCCAG
644 GGGCTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGG
* ** *
13697135 AGAACCTGACCGACAGCATTGGGGTTCTAGCGATC-GGGGGGCCGGGGGGTTGTGCGCACATGAT
709 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGG-TGTGCGCACATGAT
* *
13697199 GTGCGATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACT
773 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
13697264 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
838 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13697328 AAATGGGGACACTTTTTTCAAATGGTCACAAAATATTGTACACTTCGAGTTTTTAGCTGAAATTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * *
13697393 TTTATGCATGCCAACAAAAATACAAGGATCACGTCCACGAAGATTGGGGCCAAAACTCCTTCCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * * * * *
13697458 AAAAACTTTAAAAAATCCCAAACCGTAAAAAGTTT-TAAAATCGTTAAAAAAAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
*
13697522 TCTTGCCATGAAACTTCACGTAAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
13697587 GGCATTGGCACATAGAAATATCAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
13697652 TGCGCATCCCGTCTCTCTGGCCGGCATAGT----G--C-CCGCCCG-C-CTAAG--T--TCGGTT
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCT-CGTTTCGTCGGTT
* * * *
13697704 GGCTTAGGCATACGAAGTTCATTCCCTGTCTAAGATCGGACCAGACCAAGGGTTGC-G--GCA-G
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* * * *
13697765 --C-AT-G----CAGAGGGGGACCC-AGCCGAACCCCGGCTTGTGCATCCCACCCCTCTGGCCGG
455 ATCGGTAGCACACAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * *
13697821 TTGAGCGCCCGCACGTTTGTTTCGTGGGTTGACTTAGG----C--A--T-A----C-G---AAG-
519 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * *
13697868 -T------TT-ATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCGACAGCACATGCTGGGCT
584 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
** * ** ** *** * * * *
13697925 TAGGCATGTGCTGGTGCCATATTTTTCTTCACCGGGGCATTGTCATCGGAGCATC-GTCGGAGGA
649 CGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACT-GGAGAA
* * * * *
13697989 CCTGACCGGA-GACATTAGGGTTCCGACGATCGGGGGGG-CAGGAGGGGTGTGTGCCCATGATGT
713 CCTGACC-GACGGCATTGGGGTTCCGGCGATCGGGGGGGAC-GG-GGGGTGTGCGCACATGATGT
* * * * *
13698052 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCTGC-CATCAAACCTTGACAACTC
775 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC-CCTCATCAAACCTCGAGAACTC
* *
13698116 ACACACCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
839 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13698179 AAATGGGGACACTTTTTTCAAATGGTCACAAAATATTGTACACTTCGAGTTTTTAGCTGAAATTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * *
13698244 TTTATGCATGCCAACAAAAATACAAGGATCACGTCCACGAAGATTGGGGCCAAAACTCCTTCCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * ** * * * * *
13698309 AAAAACTTTAAAAAATCCCAAACCATAAAAAGTTTTAAAAGTCGTTAAAAAAAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
*
13698374 TCTTGCCATGAAACTTCACGTAAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
*
13698439 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* *
13698504 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGGCCG--C-CCGCCCGCCTGCTCGTTTCGTCGGTT
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCC-GCTCGTTTCGTCGGTT
* * ** * * *
13698566 GGCTTATGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCTGACTGAGGGTTGCGGCATCAAG
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* ** ** * * *
13698631 ATTGACAGCATGCATAGGGGGACCCGGCCGATCCCCGGCTT--GCATCCCACCCCTCTGGCCGGC
455 ATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
*
13698694 TGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
520 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* ** * * *
13698759 TACGGAGTTCATTCCCAGTTTAAGATCTAACCGGACCGAGGGTTGCGACAGCACAAGTTGGGCTC
585 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * ** * *
13698824 AGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCG-CTGGAGCATCACCGGAGAAC
650 GGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTC-GAAGCATCACTGGAGAAC
* * * *
13698888 CTGACCGACGGCATTGGGGTTCCGGCGATCGGGGTGGCCGAGGGGTGTGCGCACATGATGTTCGA
714 CTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCGA
* * * * *
13698953 TGGGCGTTGGAACTTGGCCCTTATATTGGCTCCCTATCTCTCATCAAACCTCGAGAACTCACACC
779 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
* *
13699018 CCCTTAATGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTG
844 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
13699076 AAATGGGGACACTTTTTTCGAATGGTCACAAAATCTGGTACACTTCAAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *** * **
13699141 TTTATGCATACCAAGAAAAATACAACGATCGCATCTACCATGTTTGGGGCCAAAACTCCTTCTGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * ** ** *
13699206 AAAAATTTTAAAAAATCCCAAGCCTTAAAAAGTTTTGAAAA-CTGTGAAAAATAGAAAACGAGTC
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATC-ATGAAAAATAGAAAACGAGTC
13699270 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * *
13699335 TGGCATTGGCACACCGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATACACGGC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * * *
13699400 TTACGTATCCCGTCTCTCTAGCC-AGCGTAGTGCCCGCCTGCCTG---TCCGCTCGTTTCATCGG
325 TTGCGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCC-GCCCGCCGCTCGTTTCGTCGG
* * * * *
13699461 TTGGCTTAGACATATGGAGTTCATTCCCAATCTAAGATCAGACCGGATCGAGGGTTGCGGTAGC-
388 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCA
* *
13699525 --A-C-GTAG-----A-A-GGGGACCC-AGCCGATCCTCGGCTTGCGCATCCTGCCCCTCTGGCC
453 GGATCGGTAGCACACAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* * * * *
13699578 -GCTAAGCACGCGCACGTTCGTTTCATGGGTTGAC-TAGGCATATGGAGTTCATTCCCAGTCTAA
517 GGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* **
13699641 G-AT-C-G-G---A----C---C--AGAT----------CGAGGGTTACGATAGCACATGCTGGG
582 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * * * *
13699680 CTCGGGCATGTGTTGGTGCCACATTTTTCTTTGCCGGGGCACCATCATCGGAGCATC-GTCAGAG
647 CTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACT-GGAG
** * * * *
13699744 AACCTGACCGGTGGCATTGGTGTTCCGGCGAT-TGGGGGGCCGGGGGGTGTGCGCACATGATTTG
711 AACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTG
***
13699808 C-ATGGGTGCTGGTACTTGGCCCTTATATTGGGTTCCTATCCCTCATCAAACCTCGAGAACTCAC
776 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
13699872 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
841 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
13699933 AAATGGGGACACTTTTTTCAAATGGTCACAAATTCTTGTACACTTCGAG-TTTT---T--A----
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
13699988 -----GC-TG-----AAAAATACAAGGATCACGTCCACCAAGATTGGGGCCAAAACTCCTTTCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * ** * *
13700042 AAAAACTTTAAAAAATCTCGAACCG-AAAAAGTTTTGAAAATCATGAAAAATAAAAAATGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* * * *
13700106 TCTTGCCATGAAGCTTCACGTGAAGGCTTATGGGACCATTGTACGAATTTAGAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
13700171 GGCATTTGCA-AGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGC
261 GGCATTGGCACA-CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
13700235 TTGCGCATCCCGTTTCTCTGGCCGACGTAGTG-CTGCCCGCC-CAC-CCGCTCGTTTCATCGGTT
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTT
* ** * * *
13700297 GGCTTAGGCATACCGAGTTCATTCCCAGTCTAAGATTGGACCGGACCGAGGGTTGTGGCAGCAGG
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* ** ** * *
13700362 ATCGGCAGCATGC-GAGGGGGACCCGGTCGATCCTCGGCTTGCGCATCCCGTCCCTCTGGCCGGC
455 ATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * *
13700426 TGAGCACCCGCATGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTGCCAGTCTAAG-A
520 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
*
13700490 T-C---G---A-----A--C--A-A---GACC-G---G-GGGTTGTGGCAGCACATGCTGGGCTC
585 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * * * * ** *
13700530 GGGCATGTGTTGGTGCCACATTTTTCTTCGTCGGGGCACCATCG-CCAGGGCATTGCCGGAGAAC
650 GGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGA-AGCATCACTGGAGAAC
* * * * *
13700594 CTGACTGGCGGCATTGGGGTTCCGGTGATCGGGTGGGACGGGGTGGGCGTGCGCACATGATGTGC
714 CTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGAC-GGG-GGGTGTGCGCACATGATGTGC
* * * *
13700659 GATGGGTGCCGGTACTTGGCCCTTATATTGGCCCCTTTTCCCTCATCAAACCTGGAGAACTCACA
777 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
13700724 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-TCG
842 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-G
*
13700784 AAATGGGGGCACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * ** ***
13700849 TTTGTGCACGCCAAAAAAAATACAAGGATAACATCTACCAAGTTTGGGGCCAAAACTCCTTTTGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * * **
13700914 AAAATTTTTAAAAAATCATGAATCC-TAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTC
131 AAAAATTTTAAAAAATC-TCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* * *
13700978 GTCTTGCCGTGAAACTTCACATGAAGGATTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* **
13701043 TGGTATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
260 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
13701108 TTGCGCATCCCGTCTCTGTGGTCGGCGTAGT----G--C-CCG--C-CCGCTCATTTCGTCGGTT
325 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTT
* * ** ** *
13701163 GGCTTAGGTATACGGAGTTCATTCTCAGTCTAAGATCAGACCGGACTGAGGGTTATGGCAGCAGG
390 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGG
* * * * *
13701228 ATCGGCAGGACATAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGC
455 ATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * *
13701293 TGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCA
520 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * ** *
13701358 TACGGAGTTCATTCCCAATCTAAGATAGGATAGGACCGAGGGTT-CTGGCAGCTCATGCTGGGCT
585 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC-GGCAGCACATGCTGGGCT
* * * * * *
13701422 CAGGCATGTGTTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATC-GTCGGAGAA
649 CGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACT-GGAGAA
* * *** * * * *
13701486 CTTGATCGGTTGCATTGGGGTTCTGGCGATCAGGGGGAACGGGGGGTGTGCGCACATGATGTCCG
713 CCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCG
13701551 AT-GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
778 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
13701615 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
843 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13701674 AAATGGGGACACTTGTTTCAAATGGTCACAAAATCTTTTACACTTCGAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
13701739 TTTGTGCATGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * ** *
13701804 AAAAATTTTAAAAAATCCCGAACCGCAAAAATTTTTGAAAATCGTGAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
13701869 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
***
13701934 GGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * *
13701999 TGTGCATCCTGTCTCTCTGGCCGACGTAGTGCCCACCCGCCTGCCTAC-CCGTTCGTTTCATCTG
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCC-GCC--CGCCGCTCGTTTCGTCGG
* * * * *
13702063 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAACCGAGGGTTACGGCAGCA
388 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCA
* * * * * *
13702128 AGATCGATAGCACACAGAGGGGGACCCGGCCAATTCCCGGCTTGCGCATCCCGCCCCTCTGGTCG
453 GGATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * * *
13702193 ACTGAGCACCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAG----TT--CA---T---
518 GCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* *
13702246 --T-C------CA-T-----TCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACATGCTGGGC
583 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * * ** *
13702296 TCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGAAGCATCA-TCGGGGA
648 TCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACT-GGAGA
* * * * * * * * * * *
13702360 ACCTGATCGGCGGCGTTAGGGTTCCGGTGATC--GGGGGCCAGGGGTTATGTGCAAATGATGTGC
712 ACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGC
* * *
13702423 GATGGGTGCTAGTAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCACA
777 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
13702488 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
842 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13702548 AAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGACTTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
13702613 TTTGTGCATGCCGACAAAAATACAAGGATCACGTCTACCAAGTTTGGGG-CAAAAATCCTACCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* *
13702677 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
*
13702742 TCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
13702807 GGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* *
13702872 TGCGCATCCCGTCTCTCTGGTCGACGTAGTGCCCG--C-CCG--C-CCGTTCGTTTCGTCGGTTG
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTTG
* * * *
13702931 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCTGACCGAGGGTTGCGGCAGCAGGA
391 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGGA
** * ** * * * * * * * * *
13702996 TTAGCAGCATGCAGTGAGGGACCCGATCGATCCCCGGCTTACGCATCCCACCCTTCTAGCCCGTT
456 TCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * * ** **
13703061 GAGCACCCGTACGCTCGTTTCGTGGGTTGACACAGGCATACGGAGTTCACCCCCAGTCTAAGCAT
521 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
* ** ** *
13703126 ACGGAGTTCATTCCCAGTCTAAGAT-GCAATTGGACCGAGGGTTGCGATAGCACATACTGGGCTC
586 ACGGAGTTCATTCCCAGTCTAAGATCG-GACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
* * * * * *
13703190 GGGAATGTGTTGGTGACGCATTTTTCTTC-ACTGGGGCACCATCGTCGGAGCATCCCCGGAGAAC
650 GGGCATGTGCTGGTGACGCATTTTTCTTCGTC-GGGGCACCATCGTCGAAGCATCACTGGAGAAC
** * * * * * *
13703254 CTGACCGGTGGCATTGGTGTTCCGGTGAT-TGGGGGGCCGGGGGGTTTGTGCACATGATGTGCGA
714 CTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCGA
* *
13703318 TGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCACACC
779 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
* * *
13703383 CCTTTAAAGAACATTTGAGATTTTACAGGTTTGCTGTCAGTAGCCATTAAAGTGTCTG
844 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
** *
13703441 AAATGGGGACACTTTTTTCAAATTTTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTT
* * * * *
13703506 TTTTATGCACGCAAACAAAAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAACTCCTTCCA
65 TTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCA
* * * ** * ** *
13703571 AAAAAATTTTAACAAATCTCGAACCATTGTATGAA-TTT-ACAAGCCAT-AAAAAT-G---GC-A
130 AAAAAATTTTAAAAAATCTCAAACC---GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
* * * * * ** *** ** * *
13703628 -TTGCCATG-CA-GAAA--T-A--TGAA-G---ATGTG-CC--TAAACCCACCTACCACCCTATC
192 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC-AT-
*** * * *** * * * ** * ** **
13703678 GATCCACGGC-TTGCGCATC-CCGTCTCTCTG--G-TCG-ACGTAGTGCCCGTCCGCCCACCCGC
255 -AAAAATGGCATTG-GCA-CACAG-AAATATGAAGAT-GTGCCTA-AACCC-ACCTACCACCCTA
* ** * * * ** * * *** *
13703737 CCG-T-C-C-GCTTGTTTCGT-CGGT-TGGGT-TAGGCATACGGAGTTCATCC-CCAATCTAAGA
313 TCGATCCACGGCTTG-CGCATCCCGTCT--CTCT-GGCCGACGTAGTGC--CCGCC---CGCCGC
* ** ** ** * *
13703794 TCG--GAC-CGGATCGAGGGTT-GC---GGCAGTA--G-G---ATTGGCAG-C--ACA-CAGAGG
369 CCGCCG-CTCGTTTCGTCGGTTGGCTTAGGCA-TACGGAGTTCATTCCCAGTCTAAGATCAGA-C
* * * * ** * * * ** **
13703842 GGGACC--CGG--CCGATCCCTGG--C--TTGCGCATC-----CTG-CCC--CTC--TGGCCGG-
431 CGGACCAAGGGTTGCGGTAGCAGGATCGGTAGCACA-CAGAGGGGGACCCGAC-CGATCCCCGGC
* * * ** * *** ** * ***** *
13703888 TTGAGCA-CCCGACTCT-TGTTTC-G-TGGGTTACCTTACGCATACGAAGTTCATTCCCAGTC-T
494 TTGCGCATCCCGCCCCTCTG-GCCGGCTGAGCGCCCGCACGC-T-CG--TTTCATGGGTTGACTT
*
13703948 AGGCATACGGAG----TT--CA-T-T---C-T-C--AG----------GTCTAAGATCTGACCGG
554 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGG
* * * *
13703988 ACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCACATTTTTCTTCGTCGG
619 ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGG
** * * * * * * *
13704053 GGCACCATCACCGGAGCCTCGCCGGAGAACCTGACTGACGGCATTGGGATTCCGGTGATCGGGGG
684 GGCACCATCGTCGAAGCATCACTGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGG
* * *
13704118 GGTCGGGGGGTGTGCGCACATGATGTCCGATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCT
749 GGACGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
13704183 ATCCCTCATCAAACCTCGAGAACTCAC-CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
814 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
13704247 GCCAGTAGCCATTAAAGTGTCTG
879 GCCAGTAGCCATTAAAGTGTCTG
* *
13704270 AAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTTTACACTTCGAGTTTTTAGCTGAACTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTT
** * * * *
13704335 TTTT-AACATGCCAACAAAAATACACGGATCACGTCTACCAAGTTAGGGGCCAAAACGCCTTCCA
65 TTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCA
* * * * * *
13704399 AAAAAATTTTAAAAAATCCCGAACCGTAAAATGTTTAAAAAATCATGAAAAATGGAAAACGAGTC
130 AAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* *
13704464 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTTTATAAATTTACAAGCCATAAAAA
195 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*
13704529 TGGCATTGGCATGA-AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
260 TGGCATTGGCA-CACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * *
13704593 CTTGCGCATCCCGTCTCTCTGGCC-AGCGTAGTGCCTGCCCACCTGCCCGCTTGCTCATTTCATC
324 CTTGCGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCC-GCCCGC-CGCTCGTTTCGTC
* * * ** * **
13704657 GATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAAACCAAACCAAGGGTTGTGGCCG
386 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAG
** * * * *
13704722 CAGGATCGACAAGCACACAGAGGGGGACCTGTCCGTTCCCCGGCTTGCGCATCCCACCCCTCTGG
451 CAGGATCG-GTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * *
13704787 CCGGCTGAGCGCCCGCAAGCTCGTTTCGTGGGTTGACTTAAGCATACGGAGTTCATTCCCAATCT
515 CCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* *
13704852 AAG-AT-C--A----A-----A--C------C--A---GACCAAGGGTTGCAGCAGCACATGCTG
580 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTG
* * * ** * * *
13704891 GGCTCCGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCATCGTCGGATG-ATCGCAGG
645 GGCTCGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTC-GAAGCATCACTGG
* * * *
13704955 AGAAACTGACCGACGGCATTAGGGTTCCGGTGATC------GA--GGGGGTGTGTGCACATGATG
709 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATG
* * *
13705012 TGCAATGGTTGCTGGTACTTGGGCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
774 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
13705077 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCGTTAAAGTGTCTG
839 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
13705140 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGATTTTAGCTAAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* ** * * **
13705205 TTTGTGCATGCCAAAAAAAATACAAGGATCACCTCTACCAAGTTTGCGGCCAAAACCCCTTCTGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * * *
13705270 AAAAATTTTAAAAATTCTCAAGCCGTAAAAAGTTTCAAAAATCGTTAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
13705335 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
**
13705400 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * ** * *
13705465 TGCGCATCCCGTCTCTTTGGCTGGTGTAGTGCCCGCCCACCCACCCGCCCGCTCGTTTCGTCGGT
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCC-GCCGCCCG-CCGCTCGTTTCGTCGGT
* * * * ** * *
13705530 TCGCTTAGGCATACGGTGTTCATTTCCAGTCTAAGATCGGACCGGACTGAGGGTTGTGGCAGCAG
389 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAG
* ** * * * *
13705595 GATCGGCAGCACGTAGAGGGGGACCCGATCGATCCCCAGCTTGCGCATCCCACCCCTCTGGCCGA
454 GATCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * * * *
13705660 CTGAGCTCCCGCACACTCATTTCGTGGTTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAAGC
519 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
*
13705725 ATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGA-------GG--G----T--T---C-
584 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCT
* * ** * * * * *
13705771 C-GGCATGTGCTGGTGCCGTATTTTTCTTCACCAGAGCACCATCGTCGGATG-ATCGCAGGAGAA
649 CGGGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTC-GAAGCATCACTGGAGAA
* * * *
13705834 CCTGATCGACGGCATTAGGGTTCCGACGATC------GA--GGGGGTGTGCGCACATGATGTGCA
713 CCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCG
* *
13705891 ATGGTTGCTGGTACTTGGGCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-
778 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
13705955 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTG
843 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
13706014 AAATGGGGACACTTTTTCCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTAAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * *
13706079 TTTGTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTAGGTCCAAAGCTCCTTTCGA
66 TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * ** *
13706143 AAAAATTTTAAAAAATCTCGAACTGCAAAAAGTTT-TGAAATCGTGAAAAATAGAAAACGAGTCG
131 AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
13706207 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA-CCATAAAAAT
196 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
** **
13706271 ATCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
261 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * * *
13706336 TGCGCATCCCGTCTCTCTGGCCGGCGTAATGCCCTCCTGCC-CGC-CCACTCGTTTAGTCGGTTG
326 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTTG
* ** *
13706399 GCATAGGCATGTGAAGTTCATTCCCAGTCTAAGATCAGA
391 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA
13706438 TCGATCCCCT
Statistics
Matches: 21092, Mismatches: 3770, Indels: 3080
0.75 0.13 0.11
Matches are distributed among these distances:
825 4 0.00
826 3 0.00
827 6 0.00
828 81 0.00
829 240 0.01
830 90 0.00
832 1 0.00
833 1 0.00
834 84 0.00
835 180 0.01
836 131 0.01
837 31 0.00
838 84 0.00
839 9 0.00
840 1 0.00
841 18 0.00
842 40 0.00
843 17 0.00
844 10 0.00
845 87 0.00
846 247 0.01
847 242 0.01
848 42 0.00
849 17 0.00
850 153 0.01
851 512 0.02
852 201 0.01
853 10 0.00
854 20 0.00
855 276 0.01
856 287 0.01
857 303 0.01
858 57 0.00
859 115 0.01
860 29 0.00
861 24 0.00
862 74 0.00
863 132 0.01
864 281 0.01
865 457 0.02
866 107 0.01
867 185 0.01
868 77 0.00
869 241 0.01
870 468 0.02
871 125 0.01
872 197 0.01
873 547 0.03
874 504 0.02
875 343 0.02
876 100 0.00
877 141 0.01
878 80 0.00
879 49 0.00
880 34 0.00
881 20 0.00
882 23 0.00
883 107 0.01
884 209 0.01
885 545 0.03
886 701 0.03
887 178 0.01
888 29 0.00
889 33 0.00
890 726 0.03
891 390 0.02
892 220 0.01
893 445 0.02
894 593 0.03
895 134 0.01
896 15 0.00
897 831 0.04
898 458 0.02
899 290 0.01
900 379 0.02
901 900 0.04
902 1630 0.08
903 594 0.03
904 1182 0.06
905 88 0.00
906 192 0.01
907 600 0.03
908 1 0.00
909 1 0.00
910 1 0.00
911 4 0.00
912 3 0.00
913 5 0.00
914 51 0.00
915 2 0.00
916 4 0.00
917 3 0.00
918 20 0.00
919 14 0.00
920 15 0.00
921 9 0.00
922 10 0.00
923 3 0.00
924 6 0.00
925 10 0.00
926 3 0.00
927 1 0.00
928 5 0.00
929 7 0.00
930 6 0.00
931 12 0.00
932 23 0.00
933 17 0.00
934 24 0.00
935 24 0.00
936 23 0.00
937 16 0.00
938 10 0.00
939 17 0.00
940 8 0.00
941 7 0.00
942 22 0.00
943 34 0.00
944 22 0.00
945 22 0.00
946 22 0.00
947 12 0.00
948 10 0.00
949 10 0.00
950 6 0.00
951 15 0.00
952 18 0.00
953 4 0.00
954 11 0.00
955 16 0.00
956 9 0.00
957 8 0.00
958 25 0.00
959 8 0.00
960 11 0.00
961 24 0.00
962 17 0.00
963 15 0.00
964 15 0.00
965 25 0.00
966 13 0.00
967 14 0.00
968 8 0.00
969 7 0.00
970 4 0.00
971 15 0.00
972 15 0.00
974 1 0.00
975 6 0.00
976 6 0.00
977 3 0.00
978 6 0.00
979 11 0.00
980 8 0.00
981 2 0.00
982 9 0.00
983 24 0.00
984 11 0.00
985 14 0.00
986 12 0.00
987 3 0.00
988 4 0.00
989 2 0.00
990 3 0.00
991 9 0.00
992 4 0.00
994 3 0.00
995 9 0.00
996 6 0.00
997 2 0.00
998 7 0.00
999 11 0.00
1000 1 0.00
1001 5 0.00
1002 9 0.00
1003 13 0.00
1004 28 0.00
1005 16 0.00
1006 40 0.00
1007 23 0.00
1008 16 0.00
1009 14 0.00
1010 17 0.00
1011 21 0.00
1012 16 0.00
1013 21 0.00
1014 17 0.00
1015 17 0.00
1016 20 0.00
1017 11 0.00
1018 17 0.00
1019 12 0.00
1020 13 0.00
1021 10 0.00
1022 8 0.00
1023 2 0.00
1024 234 0.01
1025 218 0.01
1026 207 0.01
1027 179 0.01
1028 110 0.01
1029 174 0.01
1030 401 0.02
1031 263 0.01
1032 233 0.01
1033 127 0.01
1034 135 0.01
1035 180 0.01
1036 180 0.01
1037 170 0.01
1038 214 0.01
1039 175 0.01
1040 122 0.01
1041 116 0.01
1042 104 0.00
1043 85 0.00
1044 63 0.00
1045 60 0.00
1046 48 0.00
1047 57 0.00
1048 42 0.00
1049 60 0.00
1050 68 0.00
1051 258 0.01
1052 397 0.02
1053 169 0.01
1054 519 0.02
1055 281 0.01
1056 532 0.03
1057 82 0.00
1058 48 0.00
1059 390 0.02
1060 241 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (901 bp):
AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
TTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
AAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCGCCCGCCGCTCGTTTCGTCGGTTG
GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGGA
TCGGTAGCACACAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
ACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCG
GGCATGTGCTGGTGACGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCACTGGAGAACCT
GACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGACGGGGGGTGTGCGCACATGATGTGCGATG
GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
Found at i:13685982 original size:26 final size:26
Alignment explanation
Indices: 13685946--13685996 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
13685936 GTTGACTTAG
13685946 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
13685972 GCATACGGAGTTCATTCCCAGTCTA
1 GCATACAGAGTTCATTCCCAGTCTA
13685997 TGATCGTATC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.27, G:0.18, T:0.27
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:13687359 original size:26 final size:26
Alignment explanation
Indices: 13687323--13687401 Score: 131
Period size: 26 Copynumber: 3.0 Consensus size: 26
13687313 GTTGACTTAG
*
13687323 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
13687349 GCATATGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13687375 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13687401 G
1 G
13687402 ATCAGACCGG
Statistics
Matches: 48, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.28, C:0.24, G:0.19, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13688281 original size:26 final size:26
Alignment explanation
Indices: 13688245--13688323 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
13688235 GTTGACTTAG
13688245 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13688271 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13688297 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13688323 G
1 G
13688324 ATCGGACCGG
Statistics
Matches: 50, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13689216 original size:159 final size:159
Alignment explanation
Indices: 13688977--13689310 Score: 517
Period size: 159 Copynumber: 2.1 Consensus size: 159
13688967 GTGCCAGCCT
* * *
13688977 GCTCGTTTT-GTCGGTTGGCTTAGGCATAGGGAGTTCATTCCTAGTCTAAGATCGGACCGGACTG
1 GCTC-TTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * ** *
13689041 AGGGTTGCGGCAGCAGGATCAGCAGCACATAGAGGGGGACCTGACCGATCCCCGGCTTGTGCGTC
65 AGGGTTACGGCAGCAGGATCAGCAGCACACAGAGGGGGACCCAACCGATCCCCGGCTTGTGCATC
* *
13689106 TCGCCCCTCTGGCCAGCTGAGCGCCCGCCC
130 TAGCCCCTCTGGCCAGCTGAGCGCCCGCAC
*
13689136 GCTCTTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGA
1 GCTCTTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGA
*
13689201 GGGTTACGGCAGCAGGATCAGCAGCACACAGAGGGGGACCCAACCGATCCCCGGGTTGTGCATCT
66 GGGTTACGGCAGCAGGATCAGCAGCACACAGAGGGGGACCCAACCGATCCCCGGCTTGTGCATCT
13689266 AGCCCCTCTGGCCAGCTGAGCGCCCGCAC
131 AGCCCCTCTGGCCAGCTGAGCGCCCGCAC
* * *
13689295 GTTCATTTCGTTGGTT
1 GCTCTTTTCGTCGGTT
13689311 TGCTGCCAGT
Statistics
Matches: 159, Mismatches: 15, Indels: 2
0.90 0.09 0.01
Matches are distributed among these distances:
158 4 0.03
159 155 0.97
ACGTcount: A:0.17, C:0.29, G:0.31, T:0.22
Consensus pattern (159 bp):
GCTCTTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGA
GGGTTACGGCAGCAGGATCAGCAGCACACAGAGGGGGACCCAACCGATCCCCGGCTTGTGCATCT
AGCCCCTCTGGCCAGCTGAGCGCCCGCAC
Found at i:13689925 original size:26 final size:26
Alignment explanation
Indices: 13689888--13689940 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
13689878 GTTGACTTAG
13689888 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
**
13689914 GCATAC-AGAGTTCATTCTTAGTCTAA
1 GCATACGA-AGTTCATTCCCAGTCTAA
13689940 G
1 G
13689941 ATCGGACCGA
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.30, C:0.23, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:13692585 original size:26 final size:26
Alignment explanation
Indices: 13692533--13692585 Score: 63
Period size: 26 Copynumber: 2.0 Consensus size: 26
13692523 GTTGACTTAG
*
13692533 GCATACGTAGTTCATTCCCAGTCTAA
1 GCATACGTAGTTCATTCCCAGTATAA
* *
13692559 GCATACAG-AGTTGATTCCCATTATAA
1 GCATAC-GTAGTTCATTCCCAGTATAA
13692585 G
1 G
13692586 ATCAGACCAG
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
26 22 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.23, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACGTAGTTCATTCCCAGTATAA
Found at i:13694320 original size:26 final size:26
Alignment explanation
Indices: 13694290--13694342 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13694280 GTTGACTTAG
* * *
13694290 GCATACTGAGTTCATTCCCCGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
13694316 GCATACGGAGTTCACTCCCAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
13694342 G
1 G
13694343 ATCAAACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.30, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCACTCCCAGTCTAA
Found at i:13695209 original size:26 final size:26
Alignment explanation
Indices: 13695173--13695229 Score: 96
Period size: 26 Copynumber: 2.2 Consensus size: 26
13695163 TGGGTTGACT
13695173 TAAGAATACGGAGTTCATTCCCAGTC
1 TAAGAATACGGAGTTCATTCCCAGTC
* *
13695199 TAAGCATACGGAGTTCATTTCCAGTC
1 TAAGAATACGGAGTTCATTCCCAGTC
13695225 TAAGA
1 TAAGA
13695230 TCGAATCGGA
Statistics
Matches: 28, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.32, C:0.21, G:0.19, T:0.28
Consensus pattern (26 bp):
TAAGAATACGGAGTTCATTCCCAGTC
Found at i:13696130 original size:25 final size:26
Alignment explanation
Indices: 13696079--13696130 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13696069 GATGACTTAG
*
13696079 GCATTCGGAGTTCAGTCCCAGTCTAA
1 GCATACGGAGTTCAGTCCCAGTCTAA
*
13696105 GCATACGGAGTTCA-TTCCAGTCTAA
1 GCATACGGAGTTCAGTCCCAGTCTAA
13696130 G
1 G
13696131 ATCAAACCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 11 0.46
26 13 0.54
ACGTcount: A:0.25, C:0.25, G:0.23, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCAGTCCCAGTCTAA
Found at i:13697013 original size:26 final size:26
Alignment explanation
Indices: 13696984--13697034 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
13696974 TGACTTAGGT
* *
13696984 ATACGGAGTTCATTCCCAGTTTAAGC
1 ATACAGAGTTCATTCCCAATTTAAGC
13697010 ATACAGAGTTCATTCCCAATTTAAG
1 ATACAGAGTTCATTCCCAATTTAAG
13697035 ATCAGACTAG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.22, G:0.16, T:0.31
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAATTTAAGC
Found at i:13698760 original size:26 final size:26
Alignment explanation
Indices: 13698730--13698782 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13698720 GTTAACTTAG
13698730 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13698756 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13698782 G
1 G
13698783 ATCTAACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13701366 original size:26 final size:26
Alignment explanation
Indices: 13701329--13701381 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13701319 GTTGACTTAG
*
13701329 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
*
13701355 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
13701381 G
1 G
13701382 ATAGGATAGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAATCTAA
Found at i:13701778 original size:890 final size:885
Alignment explanation
Indices: 13700462--13706437 Score: 5962
Period size: 870 Copynumber: 6.8 Consensus size: 885
13700452 GTTGACTTAG
* * * * * *
13700462 GCATACGGAGTTCATTGCCAGTCTAAGATCGAACAAGACCGGGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAATCTAAGAT-GGACAGGACCGAGGGTT-CGGCAGCACATGCTGGG
* * * * *
13700527 CTCGGGCATGTGTTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCAGG-GCATTGCCGGAG
64 CTCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTC-GGAGCATCGTCGGAG
* *
13700591 AACCTGACTGGCGGCATTGGGGTTCCGGTGATCGGGTGGGACGGGGTGGGCGTGCGCACATGATG
128 AACCTGACCGGCGGCATTGGGGTTCCGGTGATC-GG-GGGAC--GG-GGGTGTGCGCACATGATG
* * * *
13700656 TGCGATGGGTGCCGGTACTTGGCCCTTATATTGGCCCCTTTTCCCTCATCAAACCTGGAGAACTC
188 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
13700721 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-TCGA
253 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-GA
*
13700785 AATGGGGGCACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
317 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * **
13700850 TTGTGCACGCCAAAAAAAATACAAGGATAACATCTACCAAGTTTGGGGCCAAAACTCCTTTTGAA
382 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* *
13700915 AAATTTTTAAAAAATCATGAATCC-TAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCG
447 AAAATTTTAAAAAATC-TGAA-CCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCG
* * *
13700979 TCTTGCCGTGAAACTTCACATGAAGGATTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
510 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
*
13701044 GGTATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
575 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
13701109 TGCGCATCCCGTCTCTGTGGTCGGCGTAGTGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGTAT
640 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCAT
* * * *
13701174 ACGGAGTTCATTCTCAGTCTAAGATCAGACCGGACTGAGGGTTATGGCAGCAGGATCGGCAGGAC
705 ACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCAGGATCGGCAGCAC
*
13701239 ATAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGC
770 ATAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCACCCCTCTGGCCGGCTGAGCACCCGC
*
13701304 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
835 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
13701355 GCATACGGAGTTCATTCCCAATCTAAGATAGGATAGGACCGAGGGTTCTGGCAGCTCATGCTGGG
1 GCATACGGAGTTCATTCCCAATCTAAGAT-GGACAGGACCGAGGGTTC-GGCAGCACATGCTGGG
*
13701420 CTCAGGCATGTGTTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
64 CTCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * ** * * *
13701485 ACTTGATCGGTTGCATTGGGGTTCTGGCGATCAGGGGGAACGGGGGGTGTGCGCACATGATGTCC
129 ACCTGACCGGCGGCATTGGGGTTCCGGTGATC-GGGGG-AC-GGGGGTGTGCGCACATGATGTGC
13701550 GAT-GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
191 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
13701614 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
256 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
13701679 GGGACACTTGTTTCAAATGGTCACAAAATCTTTTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
321 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
13701744 GCATGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
386 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * *
13701809 TTTTAAAAAATCCCGAACCGCAAAAATTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
451 TTTTAAAAAAT-CTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
13701874 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
515 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* *
13701939 TGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGC
580 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * *
13702004 ATCCTGTCTCTCTGGCCGACGTAGTGCCCACCCGCCTGCCTACCCGTTCGTTTCATCTGTTGGCT
645 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CT--C-A--------TTTCGTCGGTTGGCT
* * ** *
13702069 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAACCGAGGGTTACGGCAGCAAGATCG
698 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCAGGATCG
** * ** * * * * * *
13702134 ATAGCACACAGAGGGGGACCCGGCCAATTCCCGGCTTGCGCATCCCGCCCCTCTGGTCGACTGAG
763 GCAGCACATAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCACCCCTCTGGCCGGCTGAG
* *
13702199 CACCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCATTCTAA
828 CACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
13702256 G-AT-C-G-G----------A-C---------CA-GACCGAGGGTTGCGGTAGCACATGCTGGGC
1 GCATACGGAGTTCATTCCCAATCTAAGATGGACAGGACCGAGGGTT-CGGCAGCACATGCTGGGC
** * * *
13702296 TCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGAAGCATCATCGGGGAA
65 TCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAA
* * * * * * * *
13702361 CCTGATCGGCGGCGTTAGGGTTCCGGTGATCGGGGGCCAGGGGTTATGTGCAAATGATGTGCGAT
130 CCTGACCGGCGGCATTGGGGTTCCGGTGATCGGGGGAC-GGGGGTGTGCGCACATGATGTGCGAT
* * *
13702426 GGGTGCTAGTAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCACACCC
194 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
13702491 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
259 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
* *
13702556 ACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGACTTTTTTTGTGCA
324 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * *
13702621 TGCCGACAAAAATACAAGGATCACGTCTACCAAGTTTGGGG-CAAAAATCCTACCGAAAAAATTT
389 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
* * ** *
13702685 TAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTCGTCTTGCCA
454 TAAAAAATCT-GAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCA
*
13702750 TGAAACTCCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
518 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
* *
13702815 CACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATC
583 CATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * *
13702880 CCGTCTCTCTGGTCGACGTAGTGCCCGCCCGCCCGTTCGTTTCGTCGGTTGGCTTAGGCATACGG
648 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG--C--TCATTTCGTCGGTTGGCTTAGGCATACGG
* * * ** ***
13702945 AGTTCATTCCCAGTCTAAGATCAGATCTGACCGAGGGTTGCGGCAGCAGGATTAGCAGCATGCAG
709 AGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACATAG
* * * * * * * * *
13703010 TGAGGGACCCGATCGATCCCCGGCTTACGCATCCCACCCTTCTAGCCCGTTGAGCACCCGTACGC
774 AGGGGGACCCGATCGATCCCCGACTTGCGCATCCCACCCCTCTGGCCGGCTGAGCACCCGCACGC
** **
13703075 TCGTTTCGTGGGTTGACACAGGCATACGGAGTTCACCCCCAGTCTAA
839 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** *
13703122 GCATACGGAGTTCATTCCCAGTCTAAGATGCA-ATTGGACCGAGGGTTGCGATAGCACATACTGG
1 GCATACGGAGTTCATTCCCAATCTAAGATGGACA--GGACCGAGGGTT-CGGCAGCACATGCTGG
* * * * **
13703186 GCTCGGGAATGTGTTGGTGACGCATTTTTCTTC-ACTGGGGCACCATCGTCGGAGCATCCCCGGA
63 GCTCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGTCGGA
* * * * * *
13703250 GAACCTGACCGGTGGCATTGGTGTTCCGGTGATTGGGGGGCCGGGGGGTTTGTGCACATGATGTG
127 GAACCTGACCGGCGGCATTGGGGTTCCGGTGA-TCGGGGGAC-GGGGGTGTGCGCACATGATGTG
* *
13703315 CGATGGGTGCTGGTACTTGACCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCAC
190 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
13703380 ACCCCTTTAAAGAACATTTGAGATTTTACAGGTTTGCTGTCAGTAGCCATTAAAGTGTCTGAAAT
255 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
** *
13703445 GGGGACACTTTTTTCAAATTTTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTT
320 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
* * * * *
13703510 ATGCACGCAAACAAAAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAACTCCTTCCAAAAA
384 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** ** * * *
13703575 AATTTTAACAAATCTCGAACCATTGTATGAA--TTT-ACAAGCCAT-AAAAAT-G---GC-A-TT
449 AATTTTAAAAAATCT-GAACC---GTAAAAAGTTTTGA-AAATCGTGAAAAATAGAAAACGAGTC
* * * * ** *** ** * * *
13703630 GCCATG-CA-GAAA--T-A--TGAA-G---ATGTG-CC--TAAACCCACCTACCACCCTATCGAT
509 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC-AT--AA
** * * * *** * * * ** * ** ***
13703681 CCACGGC-TTGCGCATCCCGTCTCTCTG--G-TCG-ACGTAGTGCCCGTCCGCCCACCCGCCCG-
571 AAATGGCATTG-GCATGCAG-AAATATGAAGAT-GTGCCTA-AACCC-ACCTACCACCCTATCGA
** * * * *** * * ** * **
13703740 T-C-C-GCTTGTTTCGT-CGGT-TGGGT-TAGGCATACGGAGT-TCATCCC-C-AATCTAAGATC
631 TCCACGGCTTG-CGCATCCCGTCT--CTCT-GGCCGGCGTAGTGCCCGCCCGCTCAT-TTCG-TC
** * * ** * ** ** * ** * **
13703796 GGACCGGATCGAGGGTTGCGGCAGTAGGATTGGCAG-C--ACA-CAGAGGGGGACC--CGGCCGA
690 GG-TTGGCT-TAGGCATACGG-AGT-TCATTCCCAGTCTAAGATCAGA-CCGGACCGAGGGTTG-
* * * * * * ** * *
13703855 T--C-CCTGGCT-TGC-GCATCCT-------G-CCC-CTC--TGGCCG-GTTGAGCA-CCCGA-C
749 TGGCAGCAGGATCGGCAGCA-CATAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCC-ACC
* ** * * ** * * ***** *
13703901 TCT-TGTTTC-G-TGGGTTA-CCTTACGCATACGAAGTTCATTCCCAGTC-TAGGCATACGGAGT
812 CCTCTG-GCCGGCTGAG-CACCCGCACGC-T-CG--TTTCGTGGGTTGACTTAGGCATACGGAGT
* *
13703961 TCATTCTCAG-GT--
871 TCATTCCCAGTCTAA
* *
13703973 -C-TA---AG----------ATC-----T-GACCGGACCGAGGGTTGCGACAGCACATGCTGGGC
1 GCATACGGAGTTCATTCCCAATCTAAGATGGACAGGACCGAGGGTT-CGGCAGCACATGCTGGGC
* * ** * *
13704017 TCGGGCATGTGTTGGTGCCACATTTTTCTTCGTCGGGGCACCATCACCGGAGCCTCGCCGGAGAA
65 TCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAA
* * * * *
13704082 CCTGACTGACGGCATTGGGATTCCGGTGATCGGGGGGGTCGGGGGGTGTGCGCACATGATGTCCG
130 CCTGACCGGCGGCATTGGGGTTCCGGTGATC--GGGGGAC-GGGGGTGTGCGCACATGATGTGCG
*
13704147 ATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC-C
192 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
13704211 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
257 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
13704276 GGACACTTTTTTCAAATGGTAACAAAATCTTTTACACTTCGAGTTTTTAGCTGAACTTTTTTT-A
322 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTTGT
* * * * *
13704340 ACATGCCAACAAAAATACACGGATCACGTCTACCAAGTTAGGGGCCAAAACGCCTTCCAAAAAAA
386 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * ** * *
13704405 TTTTAAAAAATCCCGAACCGTAAAATGTTTAAAAAATCATGAAAAATGGAAAACGAGTCGTCTTG
451 TTTTAAAAAAT-CTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
13704470 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTTTATAAATTTACAAGCCATAAAAATGGCAT
515 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
*
13704535 TGGCATGAAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
580 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * *
13704600 ATCCCGTCTCTCTGGCCAGCGTAGTGCCTGCCCACCTGCCCGCTTGCTCATTTCATCGATTGGCT
645 ATCCCGTCTCTCTGGCCGGCGTA--G--TG--C-CC-G-CC-C--GCTCATTTCGTCGGTTGGCT
* * ** * *
13704665 TAGGCATACAGAGTTCATTCCCAGTCTAAGATCAAACCAAACCAAGGGTTGTGGCCGCAGGATCG
698 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCAGGATCG
* * * * *
13704730 ACAAGCACACAGAGGGGGACCTG-TCCGTTCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTG
763 GC-AGCACATAGAGGGGGACCCGAT-CGATCCCCGACTTGCGCATCCCACCCCTCTGGCCGGCTG
* * * *
13704794 AGCGCCCGCAAGCTCGTTTCGTGGGTTGACTTAAGCATACGGAGTTCATTCCCAATCT--
826 AGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
13704852 --A-A--GA--TCA-----AA-C---------CA-GACCAAGGGTTGCAGCAGCACATGCTGGGC
1 GCATACGGAGTTCATTCCCAATCTAAGATGGACAGGACCGAGGGTT-CGGCAGCACATGCTGGGC
* * * **
13704894 TCCGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCATCGTCGGATG-ATCG-CAGGAG
65 TCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGA-GCATCGTC-GGAG
* * * * *
13704957 AAACTGACCGACGGCATTAGGGTTCCGGTGATC----GA-GGGGGTGTGTGCACATGATGTGCAA
128 AACCTGACCGGCGGCATTGGGGTTCCGGTGATCGGGGGACGGGGGTGTGCGCACATGATGTGCGA
* *
13705017 TGGTTGCTGGTACTTGGGCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
193 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
*
13705082 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCGTTAAAGTGTCTGAAATGGG
258 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
* *
13705147 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGATTTTAGCTAAATTTTTTTGTGC
323 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * * * *
13705212 ATGCCAAAAAAAATACAAGGATCACCTCTACCAAGTTTGCGGCCAAAACCCCTTCTGAAAAAATT
388 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATT
* * ** *
13705277 TTAAAAATTCTCAAGCCGTAAAAAGTTTCAAAAATCGTTAAAAATAGAAAACGAGTCGTCTTGCC
453 TTAAAAAATCTGAA-CCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
13705342 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
517 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
13705407 GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
582 GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
* * * * *
13705472 CCCGTCTCTTTGGCTGGTGTAGTGCCCGCCCACCCACCCGCCCGCTCGTTTCGTCGGTTCGCTTA
647 CCCGTCTCTCTGGCCGGCGTAGT----G--------CCCGCCCGCTCATTTCGTCGGTTGGCTTA
* * * *
13705537 GGCATACGGTGTTCATTTCCAGTCTAAGATCGGACCGGACTGAGGGTTGTGGCAGCAGGATCGGC
700 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCAGGATCGGC
* *
13705602 AGCACGTAGAGGGGGACCCGATCGATCCCC-AGCTTGCGCATCCCACCCCTCTGGCCGACTGAGC
765 AGCACATAGAGGGGGACCCGATCGATCCCCGA-CTTGCGCATCCCACCCCTCTGGCCGGCTGAGC
* * * * *
13705666 TCCCGCACACTCATTTCGTGGTTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAA
829 ACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
13705723 GCATACGGAGTTCATTCCCAGTCTAAGAT---C--G---GA----TCGG-A-C-C--G-AGGGTT
1 GCATACGGAGTTCATTCCCAATCTAAGATGGACAGGACCGAGGGTTCGGCAGCACATGCTGGGCT
* * * ** * *
13705770 CCGGCATGTGCTGGTGCCGTATTTTTCTTCACCAGAGCACCATCGTCGGATG-ATCG-CAGGAGA
66 CAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGA-GCATCGTC-GGAGA
* * * ** *
13705833 ACCTGATCGACGGCATTAGGGTTCCGACGATC----GA-GGGGGTGTGCGCACATGATGTGCAAT
129 ACCTGACCGGCGGCATTGGGGTTCCGGTGATCGGGGGACGGGGGTGTGCGCACATGATGTGCGAT
* *
13705893 GGTTGCTGGTACTTGGGCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CC
194 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
*
13705957 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAAATGGGG
259 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
* * *
13706022 ACACTTTTTCCAAATGGTCACAAAATCCTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCA
324 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * * *
13706087 TGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTAGGTCCAAAGCTCCTTTCGAAAAAATTT
389 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
* *
13706151 TAAAAAATCTCGAACTGCAAAAAGTTTTG-AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCA
454 TAAAAAATCT-GAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCA
**
13706215 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA-CCATAAAAATATCATTGG
518 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
13706279 CATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
583 CATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * *
13706344 CCGTCTCTCTGGCCGGCGTAATGCCCTCCTGCCCGCCCACTCGTTTAGTCGGTTGGCATAGGCAT
648 CCGTCTCTCTGGCCGGCGT-A-G------TGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCAT
** *
13706409 GTGAAGTTCATTCCCAGTCTAAGATCAGA
705 ACGGAGTTCATTCCCAGTCTAAGATCAGA
13706438 TCGATCCCCT
Statistics
Matches: 4245, Mismatches: 608, Indels: 486
0.80 0.11 0.09
Matches are distributed among these distances:
825 4 0.00
827 7 0.00
828 81 0.02
829 230 0.05
830 90 0.02
831 1 0.00
832 1 0.00
833 1 0.00
834 5 0.00
835 2 0.00
836 6 0.00
838 1 0.00
839 1 0.00
841 4 0.00
842 1 0.00
844 3 0.00
845 23 0.01
846 13 0.00
847 7 0.00
848 19 0.00
849 11 0.00
850 3 0.00
851 10 0.00
852 5 0.00
853 9 0.00
854 26 0.01
855 10 0.00
856 1 0.00
857 8 0.00
858 9 0.00
859 8 0.00
860 8 0.00
861 7 0.00
862 5 0.00
863 3 0.00
864 4 0.00
865 165 0.04
866 13 0.00
867 62 0.01
868 4 0.00
869 199 0.05
870 454 0.11
871 108 0.03
872 90 0.02
873 333 0.08
874 393 0.09
875 314 0.07
876 16 0.00
877 129 0.03
878 58 0.01
879 16 0.00
880 5 0.00
881 13 0.00
882 6 0.00
883 1 0.00
884 2 0.00
886 2 0.00
887 5 0.00
888 2 0.00
889 9 0.00
890 450 0.11
891 28 0.01
892 113 0.03
893 342 0.08
894 50 0.01
895 41 0.01
896 6 0.00
897 1 0.00
898 5 0.00
899 1 0.00
900 2 0.00
901 9 0.00
902 171 0.04
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (885 bp):
GCATACGGAGTTCATTCCCAATCTAAGATGGACAGGACCGAGGGTTCGGCAGCACATGCTGGGCT
CAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAAC
CTGACCGGCGGCATTGGGGTTCCGGTGATCGGGGGACGGGGGTGTGCGCACATGATGTGCGATGG
GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTA
AAAAATCTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
TCTCTCTGGCCGGCGTAGTGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
TCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACATAGAGGGGGA
CCCGATCGATCCCCGACTTGCGCATCCCACCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTC
GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:13703125 original size:26 final size:26
Alignment explanation
Indices: 13703096--13703148 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13703086 GTTGACACAG
13703096 GCATACGGAGTTCACCCCCAGTCTAA
1 GCATACGGAGTTCACCCCCAGTCTAA
**
13703122 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCACCCCCAGTCTAA
13703148 G
1 G
13703149 ATGCAATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.30, G:0.21, T:0.23
Consensus pattern (26 bp):
GCATACGGAGTTCACCCCCAGTCTAA
Found at i:13703961 original size:26 final size:27
Alignment explanation
Indices: 13703924--13703975 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 27
13703914 GTTACCTTAC
13703924 GCATACGAAGTTCATTCCCA-GTCTAG
1 GCATACGAAGTTCATTCCCAGGTCTAG
* *
13703950 GCATACGGAGTTCATTCTCAGGTCTA
1 GCATACGAAGTTCATTCCCAGGTCTA
13703976 AGATCTGACC
Statistics
Matches: 23, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
26 18 0.78
27 5 0.22
ACGTcount: A:0.25, C:0.25, G:0.21, T:0.29
Consensus pattern (27 bp):
GCATACGAAGTTCATTCCCAGGTCTAG
Found at i:13705733 original size:26 final size:26
Alignment explanation
Indices: 13705697--13705749 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13705687 TTTGACTTAG
*
13705697 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13705723 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13705749 G
1 G
13705750 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13706548 original size:26 final size:26
Alignment explanation
Indices: 13706512--13706564 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13706502 GTTGACTTAG
* *
13706512 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
13706538 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
13706564 G
1 G
13706565 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:13707224 original size:26 final size:25
Alignment explanation
Indices: 13707188--13707245 Score: 91
Period size: 26 Copynumber: 2.3 Consensus size: 25
13707178 TGACTTAGGT
*
13707188 ATACGGAGTTCATTCCTAGTCTAAGC
1 ATACGGAGTTCATTCCCAGTCTAA-C
13707214 ATACGGAGTTCATTCCCAGTCTAAC
1 ATACGGAGTTCATTCCCAGTCTAAC
13707239 AT-CGGAG
1 ATACGGAG
13707246 CGGACCGATG
Statistics
Matches: 31, Mismatches: 1, Indels: 2
0.91 0.03 0.06
Matches are distributed among these distances:
24 5 0.16
25 3 0.10
26 23 0.74
ACGTcount: A:0.28, C:0.24, G:0.21, T:0.28
Consensus pattern (25 bp):
ATACGGAGTTCATTCCCAGTCTAAC
Found at i:13708124 original size:26 final size:26
Alignment explanation
Indices: 13708087--13708138 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
13708077 TTAACTTAGA
13708087 CATACGGAGTTCATTCCCAATCTAAG
1 CATACGGAGTTCATTCCCAATCTAAG
* *
13708113 CATACGGTGTTCATTCCCAGTCTAAG
1 CATACGGAGTTCATTCCCAATCTAAG
13708139 ATCAGACCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.27, G:0.17, T:0.29
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAATCTAAG
Found at i:13709892 original size:26 final size:26
Alignment explanation
Indices: 13709856--13709908 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13709846 GTTGACTTAG
*
13709856 GCATACGGAGTTCAATCCCAATCTAA
1 GCATACAGAGTTCAATCCCAATCTAA
* *
13709882 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCAATCCCAATCTAA
13709908 G
1 G
13709909 ATTGGACTGA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.26, G:0.17, T:0.25
Consensus pattern (26 bp):
GCATACAGAGTTCAATCCCAATCTAA
Found at i:13712567 original size:902 final size:900
Alignment explanation
Indices: 13710753--13717449 Score: 8672
Period size: 891 Copynumber: 7.5 Consensus size: 900
13710743 GTTGACTTAG
* * * * *
13710753 GCATACGGAGTTGATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGCAGCACATGCTTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
* * * *
13710818 CTCGGGCATTTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCAGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGCACCATCGCCGGAGCATCGCCGGAGA
* * * * *
13710883 AACTGACCCGGCGGCATTGGGGTTCAGGCGATCGGGGGGGTCGGGGGGTGTGTGCACATGATGTG
130 ACCTGA-CCGGCGGCATTGGGGTTCCGGCGATC-AGGGGGCCGGGGGGTGTGCGCACATGATGTG
* * * * *
13710948 CGATGGGTGCTGGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATAAAACGTCGAGAACTCAT
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
*
13711013 ACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
13711078 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTGCACTTCGAGTTTTTAGTTGAATTTTGTTT
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT-TTT
* * *
13711143 -TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAA
387 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAA
* ** * *
13711207 AATTTTAAAAAATCCTAAACAGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
452 AAATTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * *
13711272 TGCCATGAAACTTCTCATGAAGGCTTAAGGGACCATTGTATGAATGTACAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
13711337 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACTTACCACCCAATCGATCCACGGCTTGC
582 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
13711402 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGTCTGCTCGTTTCGTCGGTTGG
647 GCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* * * *
13711467 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCAGCAGTAGGAT
712 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * * * * * *
13711532 CGACAGCACGTAAAAGGGGACTCGACCGATCCCCAGCCTGCGCATCTCACCCTTCTGGCCGGCTG
777 CGACAGCACGCAGAGGGGGACCCGACCGAT-CCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * * * *
13711597 AGCGCCCGTACGTTCG-TTCGGTGGGTTGAGTTAGGCATACGGAGTTCATTCCCACTCTAA
841 AGCGCCCGCACGCTCGTTTC-ATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
13711657 GCATACGGAGTTCATTCTCAGTGTAAGATCGGACCAGATCAAGGGTTGTGACAGCACATGCT-GG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
* *
13711721 CTCGGGCATGTGCTGGTGCCACCTTTTTCTTCGTCAGGAG-ACCATCGTCGGAGCATCGCCGGAG
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GG-GCACCATCGCCGGAGCATCGCCGGAG
*
13711785 AACCTGACCGGCGGCATTGGGGTTCCGACGATCAGGGCGGCCGAGGGGGTGTGCGCACATGATGT
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCAGGG-GGCCG-GGGGGTGTGCGCACATGATGT
* ** * *
13711850 GCGATGGGTGCTAGTACTTGGCCCTTATATTCACCCCCTATTCCTCATCAAACCTCGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCA
* *
13711915 CACCCCCTTAAAGAGCATTTGAGATTTTACATGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
13711980 TGGGGACACTTTTTTCAAATGTTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
13712045 GTGCATGCAAAAAAAAATGCAAGGATCACGGCTATCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
387 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAA
* **
13712110 AAATTTAAAAAATCCCAAACCG-AAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCT
452 AAATTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* *
13712174 TGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
13712239 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
582 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
13712304 ACATCCCATCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGCCCACCCGCTCATTTTGTCGGTTGG
647 GCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* *** * *
13712369 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGATTGGACCGGGGGTTGTGGCAGCAGGAT
712 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * *
13712434 TGACAGCACGTAGAGGGGGACCCGATCGATCCTC-GACTTGCGCATCCCGCCCCTCTGGTCGGCT
777 CGACAGCACGCAGAGGGGGACCCGACCGATCC-CAG-CTTGCGCATCCCGCCCCTCTGGCCGGCT
* * * * *
13712498 GAGCGCTCGCACGGTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAATCTAA
840 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
13712559 -CTATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTCCGACAGCACATGTTGG
1 GC-ATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGG
* * * *
13712623 GCTCGGGCATGTGCTGGTGCCGCA-TTTTCTTCGTCGGGGCACCATCGTCGGAGAATCACCGGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGCACCATCGCCGGAGCATCGCCGGAG
* *
13712687 AACCTGACCGGCGGCATTGGGATTCCGACGATC-GGGGTGCCGGGGGGGTGTGCGCACATGATGT
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCAGGGG-GCC-GGGGGGTGTGCGCACATGATGT
* * * * * *
13712751 GCGATAGGTACTGGCACTTGGCCCTTATATTTGCCCTCTAT-CCTCATCAAACCTCGAGAACTCA
192 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCA
* * * *
13712815 CACCTCCTTAAAGAGCATTTGACATTTTACAGGTTTGCTACCCGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
13712880 TGGGGACACTTTCTTCAAATGGTCACAAAATCTTGTACACTACGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
13712945 GTGCATGCCAAAAAAAATACAAGGATCACATCTAACAAGTTT-GGGCCAAAACTCCTTTCGAAAA
387 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAA
** * ** ** *
13713009 ATTTTTAAAAAATCCTGAACCGCAAAAAGTTTTGAAAATCGGGAAAAATAGAAAACGAGTCATCT
452 AAATTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * *
13713074 TGCCATTAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAAAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
13713139 ATTGGCACGTAGAAATATGAAGATGTGCCTAAACGCACCTACCACCCTATCGATCCACGGCTTGT
582 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
13713204 GCATCCCGTCTCTCTGGCCGGCGTAAT--------GCCCGCCTGCCCGTTCGTTTCGTCAGTTGG
647 GCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* *
13713261 CTTAGGCATACGGAGTTCATTCCCAGTATAAGATTGGACCAGACCGAGGGTTGCGGCAGCAGGAT
712 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * * *
13713326 CGATAGTACACAGAGGGGGA-CCGACCGATCCCAGCTTGCACATCCCGCCCCTCAGGCCGGCTGA
777 CGACAGCACGCAGAGGGGGACCCGACCGATCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* *
13713390 GCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
842 GCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
13713449 GCATACGGAGTTCATTCCCAGTCTAAGGTCAGACCAGACCGAGGGTTGAGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
* * * ** * * * *
13713514 CTCGGAC-TGGTGCTGGTGCCACATTTTTCTTTGCCGAGGTGCCATCACCAGAGTATCACCGGAG
66 CTCGGGCAT-GTGCTGGTGCCACATTTTTCTTCGTCG-GGCACCATCGCCGGAGCATCGCCGGAG
* *
13713578 AACCTGACCGGCGGCATTGGGGTTCCGGGGATC-GGGGGCCGGGGGGGTGTGCGTACATGATGTG
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCAGGGGGCC-GGGGGGTGTGCGCACATGATGTG
* *
13713642 CGATGGGTGCTGGTACTTGGCCCTTATATTCGCCCCCTATCCCTTATCAAACCTCAAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
*
13713707 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGGCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* **
13713772 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACGCTAGGAGTTTTTAGCTGAATTTTTTTT
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
** * * *
13713837 GTGCATG-CTGACAAAATACAAGGATCACATCTAACAAGTTTGGGGCCAAAAATCCTTCC-AAAA
387 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAA
13713900 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
452 AAA-TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* * *
13713965 TTACCATGAAACTTCACGTGAAAGCTTAAGGGACCATTGTATGAATCTACAAAG-CATTAAAAAT
516 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC-AAGCCA-TAAAAAT
** * *
13714029 GGCATTGGCACATAGAAATATGATGATGTGCCTAAACCCACCTACCACCCTATTGATCCA-GAGC
579 GGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG-GC
* * *
13714093 TTGCGCAT-CCAGTCTCTCTGGTCGGCGTAGT------------GCCCGCCCACTCGTTTTGTCG
643 TTGCGCATCCCA-TCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCG
* * * * *
13714145 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGACCAATGGTTGCAGCAGC
707 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGC
* * * * *
13714210 AGGATCGATAGCACGCAAAGGGGGACCCGACTGATCCCTAGCTTGCGCATCCCACCCCTCTAGCC
772 AGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCC-AGCTTGCGCATCCCGCCCCTCTGGCC
* * * * *
13714275 GACTGACCGCCCGTACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 GGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** * * * * *
13714340 GCGTACGGAGTTCACTCTGAATCTAAGATCGGACTGGACCGAGGGTTGTGACAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
* * * * *
13714405 CTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCAGGGCACCATCGTCGAAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGCACCATCGCCGGAGCATCGCCGGAGA
* *
13714470 ACCTGACCGGCGGCATTGGGGTTCCGGTGATCGAGGGGGCCGAGGGGTGT-CGCACATGATGTGC
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATC-AGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
13714534 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAAACCTCAAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACA
* * *
13714599 CCCCATTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCTAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
13714664 GGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGATTTTTTTTTA
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA-ATTTTTTTG
* * * *
13714729 TACATGCCAACAAAAATACAAGGATCACGTCTACCAGGTTTGGGGCAAAAAATCCTTCC-AAAAA
388 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAA
* * * * *
13714793 AATTTTAAAAAATTCTGATCCGCAACAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
453 AA-TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* *
13714858 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCTATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
13714923 CTTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCGCGGCTTGC
582 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
** * * * * * *
13714988 GCATCCTGTCTCTCTGGCCTGCATAGTGCCCGGCCGCCCGCTCGCCTGCTCGTTTCGTCAGTTGG
647 GCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* * ** * * * *
13715053 CTTAGGCATACGGAGTTCATTCCAAGTCTAGGAGCAGATCAGACCGAGGGTTGTGGTAGCTGGAT
712 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * * * * * * *
13715118 CGATAGCATGCAGAGGGGGACTCGACCGATCCCCGGCCTGCGCATCCCGCCCCTCTGGGCTGCTA
777 CGACAGCACGCAGAGGGGGACCCGACCGAT-CCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
*
13715183 AGCGCCCGCACGCTCGTTTCATTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
841 AGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
13715243 GCATACGGAGTTCATTCCCA-TCTAAGATCAGACCGGACTGAGGGTTGC-AGCAGCTCATACTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGA-CAGCACATGCTGG
* * * * *
13715306 GCTTGGGCATGTGCTGGTGTCGCATTTTTCTTCGTTAGGGCACCATTGCCGGAGCATCGCCGGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCG-TCGGGCACCATCGCCGGAGCATCGCCGGAG
* * * *
13715371 AACCTGACCGACGGCATTGGGGTTCTGGCGATC--GGGG--GGGGGGTGTGCGCAGATGATGTGT
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCAGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* *
13715432 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCCATCCCTCATCAAACCTCAAGAACTTACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACA
* * * *
13715497 CCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGGAGCAATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * *
13715562 GGGACACTTTTTTGAAATTGTCACAAAATCTTGTACAGTTCGAGTTTTTTGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
13715627 GCATGCCAAGAAAAATACAAGGATCACATCTACAAAGTTTGGGGCCAAAAATCCTTCCGAAAAAA
389 GCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAA
** * * *
13715692 ATTTTAAAAAATCTGGAACCGTAAAAAGTTTAAAAAATCATGAAAAATAGAAAACGAGTTGTCTT
454 A-TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* * *
13715757 GCCATGAAACTTCACGTGAAGGCTTAAGGGACAATTGCATGAATTTACAAGCCATAAAAATTGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* **
13715822 TTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCTATCCACGGCTTATG
583 TTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * *
13715887 CATCTCATCTTTCTGGCCAGCGTACTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGGTTGGC
648 CATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGC
** * * * * ** *
13715952 TTATACATACGAAATTCATTCCCAGTCTAAGATTAGACCGGACCGAAGGTTGTAGCAGCAGGATG
713 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCAGGATC
* * * * * *
13716017 GACAGCACACAGAGGGGGACTCAACCGATCCTCAGCTTGCGCATGCCGCCCCTCTTGTCGGCTGA
778 GACAGCACGCAGAGGGGGACCCGACCGATCC-CAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * *
13716082 GCACCCGCATGCTCGTTTCGTGGGTTGACTTAGGTATACGGAGTTCATTCCCAGTCTAA
842 GCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * * *
13716141 GCATATGGAGTTCATTCCTATTCTAAGATCGGACTGCACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
* ** * *
13716206 CTTGAACATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGCACCATCGCCGGAGCATCGCCGGAGA
* * *
13716271 ACCTGACCGGCGGCATTGGGTTTTCGACGATCGAGGGGGCCGGGGGGTTGTGCGCACATGATGTG
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATC-AGGGGGCCGGGGGG-TGTGCGCACATGATGTG
* * *
13716336 CTATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCACCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
*
13716401 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATCAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
13716466 GGGAACAATTTTTTCAAATGGTCACAAAATTTTATACACTTCGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
** * *
13716531 TGCATGCCAAAAAAAATACAAGGATCTTGTGTACCAAGTTTGGGGCAAAAAAT-CTATCCGAAAA
388 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCT-TCCGAAAA
* * * * * *
13716595 AATTTTAAAAAATCCCAAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTTT
452 AAATTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * *
13716660 TGCCATGAAACTTCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAGAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * *
13716725 ATTAGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGT
582 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
*
13716790 GCATCCCGTCT-T-T------C-T--T----------------GCCCGCTCGTTTCGTCGGTTGG
647 GCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* * * * * *
13716828 CTCAGGCATATGGAGTTCATTCCCAGTCTAAGATTAGACCAGATCGAGGGTTACGGTAGTAGGAT
712 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCAGGAT
* * ** * * *
13716893 CGACAGCACGTAGAGGGGGACCC-AGTCGATCCTCAGCTTATGTATCCCACCCCTCTGGCCGACT
777 CGACAGCACGCAGAGGGGGACCCGA-CCGATCC-CAGCTTGCGCATCCCGCCCCTCTGGCCGGCT
*
13716957 GAGCGCCCGCACGCTCGTTTAATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
840 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* ** * * *
13717018 GCATACGGAGTTCATTCCCAGTCTAAGTTCAGACTAGACCGAGGGTTACGATAGCACATCCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
* * * * * *
13717083 TTCGAGCATGTGCTGGTGCCATATTTTTTTTTGTCGGGGCACCAT---C---GC-T----AGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGCACCATCGCCGGAGCATCGCCGGAGA
* * *
13717137 ACCTGACCGACGGCATTGGGGTTTCGGCGATCAGGGGGGGTCGGGGAGGGTGTGCGCACATGATG
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCA--GGGGG-CCGGG-GGGTGTGCGCACATGATG
* *
13717202 TGCGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCAAGAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTC
* * * *
13717267 ACACCTCTTTAAATAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
13717332 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAACTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* *
13717397 TGTTCATGCCAAAAAAAATACAAGGATCACGTCTACAAAGTTTGGGGCCAAAA
386 TGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
13717450 CTCCATCGTC
Statistics
Matches: 5098, Mismatches: 625, Indels: 176
0.86 0.11 0.03
Matches are distributed among these distances:
865 1 0.00
866 33 0.01
867 5 0.00
868 246 0.05
869 3 0.00
870 1 0.00
871 2 0.00
874 1 0.00
876 1 0.00
877 271 0.05
889 99 0.02
890 228 0.04
891 747 0.15
892 399 0.08
893 99 0.02
895 1 0.00
896 1 0.00
897 70 0.01
898 592 0.12
899 160 0.03
900 367 0.07
901 70 0.01
902 648 0.13
903 558 0.11
904 247 0.05
905 248 0.05
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (900 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGCACCATCGCCGGAGCATCGCCGGAGAA
CCTGACCGGCGGCATTGGGGTTCCGGCGATCAGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAAAT
TTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
GCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
CCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
GGCATACGGAGTTCATTCCCAGTCTAAGATTAGACCAGACCGAGGGTTGCGGCAGCAGGATCGAC
AGCACGCAGAGGGGGACCCGACCGATCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
CCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:13712583 original size:26 final size:26
Alignment explanation
Indices: 13712535--13712584 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
13712525 TGACTTAGGC
*
13712535 ATACGGAGTTCATTCCTAATCTAACT
1 ATACGGAGTTCATTCCCAATCTAACT
*
13712561 ATACGGAGTTCATTCCCAGTCTAA
1 ATACGGAGTTCATTCCCAATCTAA
13712585 GATCAGACTG
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.24, G:0.14, T:0.32
Consensus pattern (26 bp):
ATACGGAGTTCATTCCCAATCTAACT
Found at i:13713453 original size:26 final size:26
Alignment explanation
Indices: 13713423--13713475 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13713413 GTTGACTTAG
13713423 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
13713449 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
13713475 G
1 G
13713476 GTCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:13714364 original size:26 final size:26
Alignment explanation
Indices: 13714317--13714366 Score: 64
Period size: 26 Copynumber: 1.9 Consensus size: 26
13714307 GACTTAGGCA
* *
13714317 TACGGAGTTCATTCCCAGTCTAAGCG
1 TACGGAGTTCACTCCCAATCTAAGCG
**
13714343 TACGGAGTTCACTCTGAATCTAAG
1 TACGGAGTTCACTCCCAATCTAAG
13714367 ATCGGACTGG
Statistics
Matches: 20, Mismatches: 4, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
26 20 1.00
ACGTcount: A:0.26, C:0.24, G:0.22, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCACTCCCAATCTAAGCG
Found at i:13715248 original size:26 final size:25
Alignment explanation
Indices: 13715217--13715268 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 25
13715207 GTTGACTTAG
13715217 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCA-TCTAA
13715243 GCATACGGAGTTCATTCCCATCTAA
1 GCATACGGAGTTCATTCCCATCTAA
13715268 G
1 G
13715269 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 6 0.23
26 20 0.77
ACGTcount: A:0.27, C:0.27, G:0.19, T:0.27
Consensus pattern (25 bp):
GCATACGGAGTTCATTCCCATCTAA
Found at i:13717028 original size:26 final size:26
Alignment explanation
Indices: 13716992--13717044 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
13716982 GTTGACTTAG
13716992 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13717018 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13717044 G
1 G
13717045 TTCAGACTAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13718493 original size:26 final size:26
Alignment explanation
Indices: 13718464--13718542 Score: 122
Period size: 26 Copynumber: 3.0 Consensus size: 26
13718454 CTGGTCTGAT
* *
13718464 CTTAGAATGGGAAAGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
* *
13718490 CTTAGACTGGGAATGATCTCCGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
13718516 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
13718542 C
1 C
13718543 CTAAGTCAAC
Statistics
Matches: 47, Mismatches: 6, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 47 1.00
ACGTcount: A:0.28, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:13719419 original size:26 final size:26
Alignment explanation
Indices: 13719383--13719435 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
13719373 CTAGTCTGAT
13719383 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13719409 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13719435 C
1 C
13719436 CTAAGTGAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13719880 original size:898 final size:899
Alignment explanation
Indices: 13717588--13728519 Score: 14154
Period size: 897 Copynumber: 12.2 Consensus size: 899
13717578 CTGATCCGAT
* ** * *
13717588 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATAAAACGATCGTGCGGCTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * *
13717653 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATTGGCCAGGTCCCCCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * * *
13717718 TGCTGTC-GTGACCCTCGATCTGGTCTCATCTTAGACTGGGAATTAACTTCGTATTCCTAAGCCA
131 TGCTG-CAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * *
13717782 ACTAACGAAACAAATGAGCGGACGGACAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAAC----GAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
* *
13717847 AGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCA
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
13717912 ATTTTTATGGCTTGTAAATTCATACTATGGTCCCTTAAGCTTTCGA-GTGAAGTTTCATGGCAAG
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC-ACGTGAAGTTTCATGGCAAG
* * * * ** **
13717976 GCGACTCGTTTTCTATTTTTGACGATTTTTTAAACTTTTTACGGTTCGAAATTTTTTATTATTTT
385 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
** * *
13718041 TTCTTAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTG-TTGCACAA
450 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
** *
13718105 AAAAATTTTGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
13718170 TCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * ** *
13718235 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCCATATAAGGGCCAAGTAGTAGCACCCATTGCAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * ** *
13718300 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCTCTGAAACCCCAATGCCACCGATCAGGTTCTC
710 ATCATGTGCGCACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
** * * *
13718365 CGGTGATGCTCCAACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCA
775 CGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCA
* * * ** *
13718430 ACTTGTTCTATCGTAACCCTCGGTCTGGTCTGATCTTAGAATGGGAAAGAACTCTGTATGCTTAG
840 GCATGTGCTGCCGCAA-CC-C--TC--G---G-TC------T-----AG---TCTG-AT-CTTAG
*
13718495 ACTGGGAATGATCTCCGTATG
879 ACTGGGAATGAACTCCGTATG
* * *
13718516 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * * *
13718581 CGGTCAAAGGGGTGGGATGCGTAAGCCGGGGATCGGCCAGGTCCCTCTCTGCATGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
13718646 T-CTGCCA-CAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTGCGCATGCCTAAGCCA
131 TGCTG-CAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
13718709 ACTGACGAAATGAGCGGGTGGGTGGGC--ACAAC-AC--CGGCCAGAGAGACGGGATGCGCAAGC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGC-ACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * *
13718769 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCACATTTCTGCACGCCAATGCCATT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* *
13718834 TTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCATGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* *
13718899 CTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTCTCG
389 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * * *
13718964 GAAGGTGTTTTGGGCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACACAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
13719029 ATTCAGCTAAAAACCCAAAGTGTACAAGATTTTGTGACCATTTGAGAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
13719094 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
13719159 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
13719224 TGTGCGCACA-CCCCCTGACCCCCCGATCACCGGAATCCTAATGCCTTCAGTCAGGTTCTCCGAC
714 TGTGCGCACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
** * * **
13719288 GATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCAGCACGAACACATGCTTGAGCCCAGCAT
779 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * * *
13719353 GTGTTGCCGTAACCCTTGTTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
844 GTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
13719409 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACAAGTGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* *** * *
13719474 CGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCAATCGGGTCCCCCTCTGTGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * ** * *
13719539 TGTTGCAGCAATTCTCAGTCTGGTCCAATCTTATACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTGCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
13719604 CTGATGAAACGAGTGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
13719669 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
** *
13719734 TATGAATTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
13719799 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCGG
391 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTCGG
* * *
13719864 AAGGATTTTTGG-CCCAAACTTGGTATACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
13719928 TTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
13719993 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
13720058 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
**
13720123 GTGCGCACACCCCCC-GACCCCCCCGATCGCTAGAACCCCAATGCCGTCGGTCAGGTTCT-C--C
715 GTGCGCACACCCCCCTG-CCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
* *
13720184 ---G----G-CGATGGTGCCCCGACGAAGAAAAATGCAGCACCAACACATGCCTGAGCCCAGCAT
779 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * * * **
13720241 TTGCTGCCACAACCCTCAGTC-CGATCCAATCTTAGACTGGGAATGAACTCCGTATG
844 GTGCTGCCGCAACCCTCGGTCTAG-TCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
13720297 CTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCTACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * ** * * *
13720362 CGGCCAGAGGGGCGGGATGTGCAAGCCAGGGATCTACCGAGTCCCCCTCTGCATGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
13720427 TGCTACCA-CAACCCTCTGTCTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
131 TGCT-GCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
*
13720491 ACCGACGAAACGAGCGGGCGGGTGGGCGGGCGGGCTGGCACTACGTCGGCAAGA-AGGACGGGAT
195 ACCGACGAAACGAGCGGGC----GGGCGGGC--G--GGCACTACGTCGGCCAGAGA-GACGGGAT
* * **
13720555 GCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTATGTGTGCCA
251 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* * * *
13720620 ATGCCATTTTTTATGGCTTGTAAATTCAAACAATGGCCCCTTAAGCCTTCACGTGCACTTTCATG
316 ATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * ** ** *
13720685 GCAAGATGACTCGTTTTCTATTTTTCACGATTTTCCAAACTTTTTGTGGTTCAGGATTTTTTAAA
380 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * *
13720750 ATTTTTTCAGAAGGAATTTTGGCCCCAAACCTT-ATAGACATGATCCTTGTATTTTTGTTGGCAT
445 ATTTTTTCGGAAGGAGTTTTGGCCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
*
13720814 GCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
509 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
13720879 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
574 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
13720944 GGTGTGAGTTCTTGAGGTTTGTTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACGAGCACCCA
639 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * *
13721009 TCGCACATCATGTGCGCACACCCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
704 TCGCACATCATGTGCGCACACCCCC-CTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCA
* * *
13721074 GG---T-------T-CTCCGACGATGGTGCCCCGACAAAGAAAAATACGGCACCAACACATGTCC
768 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCC
** * * * *
13721128 GAGCCCAGCATGTGCTGTTGAAACCCTCGGTCTGGT-TCGATCTTAGACTGGGAATGAACACCAT
833 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTAGTCT-GATCTTAGACTGGGAATGAACTCCGT
13721192 ATG
897 ATG
*
13721195 CTTAGACTGGGAATGAAACTCC-TATGCCTATGT-------C---A--A-C---C-----CTCAG
1 CTTAGACTGGGAATG-AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAG
* * * * *
13721238 CCAGCCAAAGGGGCGGGATGCGCTAGCCGGGGATCGACCGGGTCCCCCTCTGTGTGCTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * **
13721303 TTGTTGCCA-CAACCCTCGATCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTG-CAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
13721367 CACTGACAAAAACGTGCAGAAGGGTGCGGGCAGGCGGGCACTAACGTCGGCGCA-AGAGACGGGA
194 AACCGAC-GAAAC--G-AG--CGG-GCGGGCGGGCGGGCACT-ACGTCGGC-CAGAGAGACGGGA
* *
13721431 TGTTGCAAGCCGGTTGGGGGATGGATAGGGTGGTCAGGTGGGTTTAGGCACATCTTCAATATTTC
250 TG-CGCAAGCC-G-T---GGATCGATAGGGTGGT-AGGTGGGTTTAGGCACATCTTC-ATATTTC
*
13721496 TGCATGCCAATG-CA-TTTTATGGCTTTGT-AATTCGTACAATGGTCCCTTAAGCCTTCACGTGA
307 TGCATGCCAATGCCATTTTTATGGC-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
13721558 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
371 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
* * *
13721623 TTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAACTTGGTAGACATGATCCTTGTATTTTT
436 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
13721688 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AA
501 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
13721752 AAAGT-TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
566 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
13721816 TTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG-CAAGTACC
631 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * **
13721879 AGCACCCATCGCACATCATGTGCACACACCCCCCCGGCCCCCCGATCATCGGAACCCCAATGCCG
696 AGCACCCATCGCACATCATGTGCGCACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCG
* ** *
13721944 CCGGTCAGGTTCTCCGACGATGCTCC-AGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGC
761 TCGGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAAC
* *
13722008 ACATGCCCGAGCCCAGCATATGCTGCTGCAA-CC-C--TC--G---G----T---CT-GG--T--
825 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGA
13722052 -CT--G-AT-
890 ACTCCGTATG
* * * * *
13722057 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACAAAACGAGCATTCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * *
13722122 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
13722187 TGCTACCGCAACCCTCGGTCCGGT-TCAATCTTAAACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCAGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
13722251 ACCGACGAAACGAGCGGGCGGACGGGCGGGCACTACGTCGGCCAAAGAAACGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
*
13722316 GTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
*
13722381 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* *
13722446 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGA
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * *
13722511 AAGGAGTTTT-G-CCCATAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCTTGCACAAAACA
455 AAGGAGTTTTGGCCCCA-AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * *
13722574 ATTCAGCTAGAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCGCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
13722639 ACACTTTAATGGCTACTGGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
584 ACACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
13722704 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATTGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
13722769 ATGTTCGCAAACCTCCCCTCGGCCCCCCCGATCGCC-GAACCTTC-ATACCCGTCGGTCAGGTTC
713 ATGTGCGCACACC-CCCCT--GCCCCCCCGATCGCCGGAACC-CCAAT-GCCGTCGGTCAGGTTC
** *
13722832 TCCGACGATG--CC--CGATGGTGCCCCGGTGAAGAAAAATGTC-GCACCAAGCACATGGCCGAG
773 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATG-CGGCACCAA-CACATGCCCGAG
* * *
13722892 CCCAGCATTGTGCCTGCCGCAACCCCTCAGTCTGGTCCTGATCTTAGACTGGGAATGAACTCCAT
836 CCCAGCA-TGTG-CTGCCGCAA-CCCTCGGTCTAGT-CTGATCTTAGACTGGGAATGAACTCCGT
13722957 ATG
897 ATG
* * * * * * **
13722960 CTTAGACTGGAAGATGAACTCCGTATGCCTAAGTCAACCCACCG-GATGAACATTC-GGCACTCA
1 CTTAGACTGGGA-ATGAACTCCGTATGCCTAAGTCAACCCA-CGAAACGAGCGTGCGGGTGCTCA
* * * * *
13723023 GTCGGCTAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCATGCTGCCCGA
64 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTG-CCGA
* * * * *
13723088 TCTTGCTACCGCAA-CCTCAGTCTGGT-TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
128 TCCTGCTGCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
*
13723151 C-ACCGACGAAACGAG-GCG-GGGCGGGCGGGCACTACGTC-GCCAGAGAGACGGGATGCGCCAA
193 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG-CAA
13723212 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTGCATGCCAATGCC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-TGCATGCCAATGCC
13723277 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCCAAG
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG-CAAG
*
13723342 ACGACTCG-TTTCTATTTTTCATGA-TTTTCAAACTTTTTAC-GTTCGGGATTTTTTAAAATTTT
385 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* *
13723404 TTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCACAA
450 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
13723469 AAAAATTCAGCTAGAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
515 AAAAATTCAGCTA-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
13723534 TTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAAATCTCAAATGCTCTTTAAGGGGGTG
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT-AAAATCTCAAATGCTCTTTAAGGGGGTG
* **
13723599 TGAAGTTCTTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCATCTACCAGCACCCATC
643 TG-AGTTC-TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
13723664 GCACATCATGTGCACACACCCCCC-ACCCCCCCGATCGCTGGAACCCCAATGTCGCCGGTCAGGT
706 GCACATCATGTGCGCACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGT
* * ** * * *
13723728 TTTTCGACGATGCTCCGGTGATGGTGCCCTGGA-GAAGAAAACTGTGGCACCAACACATGCCCGA
771 TCTCCGACGATGCTCCGACGATGGTGCCC-CGACGAAGAAAAATGCGGCACCAACACATGCCCGA
* * * ** * *
13723792 CCCCAACCTGTGCTGCCGCAACCCTCGGTCCGGT-TCGATGTTAGACTGGGAATGAACTCCGGAT
835 GCCCAGCATGTGCTGCCGCAACCCTCGGTCTAGTCT-GATCTTAGACTGGGAATGAACTCCGTAT
13723856 G
899 G
*
13723857 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * * *
13723922 CAGCCAGAGGGGTGGGATACGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACATGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
13723987 TGTTGTCA-CAACCTTCGGTCCAGTTTGATCTTAGACTGAGAATGATCTCCGTATGCCTAAGCCA
131 TGCTG-CAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
13724051 ACCGACGAAACGAGCGGGCGGACGGGTAGGCGGGTACTACGTCGGCAAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAGCGGGCGG--GCG--GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
*
13724116 AGCCGTGGATCGATAGGGTGGTGGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
13724181 ATTTTTATGGCCTGTAAATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
13724246 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCAGTTCGGG-TCTTTTTAAAATTTT
386 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGAT-TTTTTAAAATTTT
* * * *
13724310 TTTGGAAGGCGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTAGCATGCACAA
450 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
13724375 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGAATTTGTGATCATTTGAAAAAAGTGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * ** *
13724440 TCAAACACTTTAATTGTTGGTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
13724505 AGTTCTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
13724570 ATCATGTGTGCACACCCCCCTGGGCCCCCCGATTGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
710 ATCATGTGCGCACACCCCCCT-GCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * *
13724635 CTGACGATGCTCCGACGATGGTGCCCTGGCGAAGAAAAATACGGCACCAACACATGCCCAAGCCC
774 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCC
* * * *
13724700 AGAATGTCCT--CTCATAACC-C--TC-A----G----T---CT-GG--T---CT--G-AT-
839 AGCATGTGCTGCCGCA-ACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
13724735 CTTAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGACCGTGCGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * *
13724800 CGGCCAGAGGCGCAGGATGTGCAAGCTGGGGATCGGCCGGGTCCCCCTCTACGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * *
13724865 TGCTGTC-GCAACCCTCAATCTGGTTTAATCTTAGACTAGGAATGAACTCCATATGCCTAAGCCA
131 TGCTG-CAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
13724929 ACAGACAAAACGAGCGGGCGGGCGGG-GGGCACTACGTCGACCAGAGAGACGGGATGCGTAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
13724993 GTGGATCAATAGGGTGGTAGGAGGGTTTAGGCACATCTTCATATATTCTACCTGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTGCATGCCAATGCCATT
*
13725058 TTTATGGCTTGTATATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
13725123 CTCGTTTTCTATTTTTCATGATTTTTGAAAATTTTTGCGGTTCGGGACTTTTTAAAATTTTTTCG
389 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
**
13725188 GAAGGAGTTTTGGCCCCAAACTTATTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
13725253 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTTAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
13725318 ACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTAAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
13725383 CTCCAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
13725448 TGTGTGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGTCGCTCAGGTTCTCCGA
714 TGTGCGCACA-CCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * * *
13725513 CGATGCTCCAATGATGGTGCCCTGGCGAAGAAAAATGCGGCACCAA-ACATGCCCGAGCCCAGCA
778 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* * *
13725577 TGTGCTGCTGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCTGTATG
843 TGTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
** * * *
13725634 CTTAGACAAGGAATGAACTCCGTATGCCTAAGTTAACCCATGAAACGAGCGTGTGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * *** * * * * *
13725699 CAGCCAGAAGTATGGGATGTGCAAGCCGGGGAT-GGGCGGGTCCCCCTCTGCGTGCTACCAATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
13725763 TGCTATC-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCA
131 TGCT-GCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
13725827 ATCGACGAAACGAGCGGGCGGGTGGG-GGGCACTATGTCGACCAGAGAGACGGGATGCACAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
*
13725891 GTTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
13725956 TTATGGCCTGTAAATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
13726021 TCGTTTTCTATTTTTCACGATTTTTGAAAATTTTTACGGTTCGGGACTTTTTAAAATTTTTTCGG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
** *
13726086 AAATAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATTCA-AAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
13726150 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAAGTGTCCCCATTTCAG
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAG
*
13726215 ACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
13726279 CTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
13726344 TGTGCGCCACACCCCCCT-CGCCCCCGATTGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
714 TGTGCG-CACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * * * * *
13726408 CGATGCTCCGATGATGGTGCCCTGGCAAAGAAAAATGCGGCACCAACACATGCCCAAGCCCAACA
778 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* *
13726473 TGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
843 TGTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
13726530 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * ** ** *
13726595 CGGCCAGAGGGGCAGGATGCGAAAGTCGGGGATCGATCGGGTCCCCCTCTATGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
13726660 TGCTACCA-CAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCA
131 TGCT-GCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
13726724 ACCGACGAAAAGAGCGGGCAGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
* *
13726789 GTGGATCGATAGGGTGGTAGTTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA-TT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
13726853 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * *
13726918 TTGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTGCGGTT-TGGATTTTTTAAAATTTTTTCAG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
13726982 AAGGAGTTTTGGCCCCAAACTTGTTA-ACCATGA-CCGTTGTATTTTTGTTGGCATGCACAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGA-CGTGATCC-TTGTATTTTTGTTGGCATGCACAAAAA
* *
13727045 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTGCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
13727110 GACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATCCTCTTTAATGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
13727175 TCTCAAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * * *
13727239 ATGCGTGAACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGCCAGGTTCTCC-
713 ATGTGCGCACA-CCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* *
13727303 AGCGATACTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
777 A-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAG
*
13727368 CATGTGCT---------C-CGGTC----C-AATCTTAGACTGGGAATGAACTCCGTATG
841 CATGTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * ** *
13727412 CTTAGACTGGGAATGAACTCCATATGCCTAAGTGAACCCATGAAAAGAGCATGCGAGCACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * **
13727477 CGGCCAGATGGGCGGGATGCACAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTAGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* *
13727542 TGCTGCCA-CAACCCTCGGTTCAGTCTGATCTTAGA-TGGGGAATGAACTCCGTATGCCTAAGCC
131 TGCTG-CAGCAACCCTCGGTCCGGTCTGATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGCC
* * * ** * *
13727605 AACCGACCAAACGAGCGGGCGGGTGGGCAGGCACTACACCGACCAGAGAGACGGGATGCGCAAGT
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * ** ** * *
13727670 CGTGGATCGAAAGAGTGGTAGGTGGGTTTAGAAACATCTTCATATTTCTGTGTACGAATGCCATT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* *
13727735 TTTATGGCTTGCAAATTCATACAATGGTCCCTTAAGTCTTCACGTGAAGTTTCATGGCAAGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
13727800 CTCATTTTCTATTTTTCACGATTTTTTAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTG
389 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
13727865 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TCTGGCATGCACAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACAAAAA
* *
13727929 AATTCAGCTAAAAGCTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
13727994 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
13728059 TCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
13728124 ATGTGCGCACAGCCCCCCGGTCCCCCCGATTGTCGGAACCGCAATGCCGTCGGTCAGGTTCTCCG
713 ATGTGCGCACA-CCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * ** * * *
13728189 ACTATGCTCCGACGATGGTGCCCTGGTGAAGAAAAATGCGGCACCAGCTCATGCCCAAGCCCAGC
777 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
* *
13728254 ATGTGCTG-CGACAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
842 ATGTGCTGCCG-CAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
13728312 CTTAGACTGGTAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
** * * * * * * * *
13728377 CGGCCAGAGGGGCTCGATGCGTAAGTCGAGGATCGACCGGGTCCCCCTTTACATGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
13728442 TGCTGCTGCAACCCTCGGTCCAGTCTGATCTTAGACTGGAAATGAACTCCGTATTCCTAAGCCAA
131 TGCTGCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
13728507 CCGATGAAACGAG
196 CCGACGAAACGAG
13728520 AAGGCGGTAG
Statistics
Matches: 8876, Mismatches: 872, Indels: 540
0.86 0.08 0.05
Matches are distributed among these distances:
861 5 0.00
862 25 0.00
863 2 0.00
866 1 0.00
867 22 0.00
868 116 0.01
869 154 0.02
870 28 0.00
871 37 0.00
872 85 0.01
873 149 0.02
874 504 0.06
875 45 0.01
876 60 0.01
877 181 0.02
878 241 0.03
879 54 0.01
880 78 0.01
881 13 0.00
882 528 0.06
883 246 0.03
884 246 0.03
885 182 0.02
886 5 0.00
887 12 0.00
888 345 0.04
889 5 0.00
890 3 0.00
891 2 0.00
892 9 0.00
893 141 0.02
894 74 0.01
895 109 0.01
896 645 0.07
897 1114 0.13
898 1004 0.11
899 344 0.04
900 404 0.05
901 53 0.01
902 209 0.02
903 111 0.01
904 265 0.03
905 160 0.02
906 110 0.01
909 2 0.00
913 1 0.00
915 1 0.00
917 1 0.00
918 3 0.00
919 351 0.04
920 202 0.02
921 3 0.00
922 2 0.00
923 11 0.00
927 60 0.01
928 113 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGT
GCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:13720300 original size:26 final size:26
Alignment explanation
Indices: 13720271--13720323 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13720261 CCGATCCAAT
*
13720271 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
13720297 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13720323 C
1 C
13720324 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:13722986 original size:27 final size:26
Alignment explanation
Indices: 13722934--13722987 Score: 81
Period size: 27 Copynumber: 2.0 Consensus size: 26
13722924 TGGTCCTGAT
*
13722934 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGAAATGAACTCCATATG
*
13722960 CTTAGACTGGAAGATGAACTCCGTATG
1 CTTAGACTGGAA-ATGAACTCCATATG
13722987 C
1 C
13722988 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
26 11 0.44
27 14 0.56
ACGTcount: A:0.30, C:0.20, G:0.24, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCATATG
Found at i:13723862 original size:26 final size:26
Alignment explanation
Indices: 13723828--13723883 Score: 96
Period size: 26 Copynumber: 2.2 Consensus size: 26
13723818 GGTCCGGTTC
13723828 GATG-TTAGACTGGGAATGAACTCCG
1 GATGCTTAGACTGGGAATGAACTCCG
13723853 GATGCTTAGACTGGGAATGAACTCCG
1 GATGCTTAGACTGGGAATGAACTCCG
*
13723879 TATGC
1 GATGC
13723884 CTAAGTGAAC
Statistics
Matches: 29, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
25 4 0.14
26 25 0.86
ACGTcount: A:0.27, C:0.18, G:0.30, T:0.25
Consensus pattern (26 bp):
GATGCTTAGACTGGGAATGAACTCCG
Found at i:13725637 original size:26 final size:26
Alignment explanation
Indices: 13725608--13725660 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13725598 CCAGTCTGAT
** *
13725608 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACAAGGAATGAACTCCGTATG
13725634 CTTAGACAAGGAATGAACTCCGTATG
1 CTTAGACAAGGAATGAACTCCGTATG
13725660 C
1 C
13725661 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACAAGGAATGAACTCCGTATG
Found at i:13726540 original size:26 final size:26
Alignment explanation
Indices: 13726504--13726556 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13726494 CTGGTCTGAT
13726504 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
13726530 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13726556 C
1 C
13726557 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13727416 original size:26 final size:26
Alignment explanation
Indices: 13727386--13727438 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13727376 CCGGTCCAAT
*
13727386 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
13727412 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
13727438 C
1 C
13727439 CTAAGTGAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:13728315 original size:26 final size:26
Alignment explanation
Indices: 13728286--13728338 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13728276 CCAGTCCGAT
13728286 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
13728312 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13728338 C
1 C
13728339 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13729609 original size:709 final size:714
Alignment explanation
Indices: 13728525--13729876 Score: 1983
Period size: 709 Copynumber: 1.9 Consensus size: 714
13728515 ACGAGAAGGC
* * * *
13728525 GGTAGGTTGGTTTAGGCATATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
1 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGAAAAT
** *
13728590 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGTAAGATGACTCGTTTTCTATTTTT
66 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTTT
** **
13728655 CATGATTTTTGAAACTTTTTGAGGTTCGAGATTTTTTAAAATTTTTTCGGTGGGAGTTTTGGCCC
131 CATGATTTTCAAAACTTTTTGAGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
*
13728720 AAACTTGGTAGACATGATCCTTGTTCTTTTGCTGGCATGCACAAAAAAATTCAGCTAAAAAACTG
196 AAACTTGGTAGACATGATCATTGTTCTTTTGCTGGCATGCACAAAAAAATTCAGCTAAAAAACTG
* *
13728785 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATT
261 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTACT
*
13728850 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGTGGCTTGATGAGG
326 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGCTTGATGAGG
13728915 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACA-C-CCCC
391 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC--ACACCGCCCC
** * *
13728978 CC-GGGCCCCCCGATCGTCGGAACCCCAAT-GCC-GTC-GG-TCAAGT-T-CTCCGGGGATGGTG
454 CCTGGGCCCCCCGATCACCAGAACCCCAATCGCCGGTCAGGTTCAAGTATGCTCCGGCGATGGTG
* * * ** *
13729036 CCCCAATGAAGAAAAATGTGGCACTAGCACATGACCGAGCCCAGCATGTGCTGCTGCAACCCTTG
519 CCCCAATGAAGAAAAATGCGGCACCAGCACATGACCAAGCCCAGCATGTGCTGCCACAACCCTCG
* * *
13729101 GTCCGGTCTGATCTTAGACTGAGAATGAACTCTGTATGCATAAGCCAACCGACGAAACGAGCGGG
584 GTCCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCATAAGCCAACCCACGAAACGAGCGGG
13729166 GGGGATGGCGAGCGGGCACTGCACCGACCAGAGAGACAGGATGCGCAAGCCGTGCATCGATAGGG
649 GGGGATGGCGAGCGGGCACTGCACCGACCAGAGAGACAGGATGCGCAAGCCGTGCATCGATAGGG
13729231 T
714 T
*
13729232 GGTAGGTGGGTTT-GGTCACATCTTCATATTTCTACTTGCCAATGCCATTTTTATGGCTTGGAAA
1 GGTAGGTGGGTTTAGG-CACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTT-GAAA
* * *
13729296 ATTCTTACAATGGTCCTTTAAGCCTTGACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTT
64 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTT
* * * *
13729361 TTCTTGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGG
129 TTCATGATTTTCAAAACTTTTTGAGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GG
* * * *
13729426 CCCAAACTTGGT-GCACGTGATGATT-TTATTTTTGTTGGCATGCACAAAAAAATTCAGCT-AAA
193 CCCAAACTTGGTAG-ACATGATCATTGTT-CTTTTGCTGGCATGCACAAAAAAATTCAGCTAAAA
13729488 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
256 AACT-GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
** *
13729553 CCTACTGGCAGCAAACCTGTAAAATCTTGAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
320 CCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGCTTG
* *
13729618 ATGAGGGATAGGGGGCTAATATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACCG
385 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACCG
* * **
13729683 CCCCCCTTGGCCCCCCGATCACCAGAACCCTAATGCCGCCGGTCAGGTTCTCTGGTGATGCTCCG
450 CCCCCCTGGGCCCCCCGATCACCAGAACCCCAAT--CGCCGGTCAGG-T-TCAAGT-ATGCTCCG
* *
13729748 GCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCA
510 GCGATGGTGCCCCAATGAAGAAAAATGCGGCACCAGCACATGACCAAGCCCAGCATGTGCTGCCA
* * * * * *
13729813 TAACCCTCGGTCTGGTCTGATCTTAGAATGGGAGTGAACTCCGTATGCCTAAGTCAACCCACGA
575 CAACCCTCGGTCCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCATAAGCCAACCCACGA
13729877 CATGAGCGTG
Statistics
Matches: 568, Mismatches: 57, Indels: 26
0.87 0.09 0.04
Matches are distributed among these distances:
706 2 0.00
707 55 0.10
708 127 0.22
709 233 0.41
710 22 0.04
713 3 0.01
714 3 0.01
715 2 0.00
718 4 0.01
720 1 0.00
721 116 0.20
ACGTcount: A:0.25, C:0.23, G:0.24, T:0.28
Consensus pattern (714 bp):
GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGAAAAT
TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTTT
CATGATTTTCAAAACTTTTTGAGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
AAACTTGGTAGACATGATCATTGTTCTTTTGCTGGCATGCACAAAAAAATTCAGCTAAAAAACTG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTACT
GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGCTTGATGAGG
GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACCGCCCCCC
TGGGCCCCCCGATCACCAGAACCCCAATCGCCGGTCAGGTTCAAGTATGCTCCGGCGATGGTGCC
CCAATGAAGAAAAATGCGGCACCAGCACATGACCAAGCCCAGCATGTGCTGCCACAACCCTCGGT
CCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCATAAGCCAACCCACGAAACGAGCGGGGG
GGATGGCGAGCGGGCACTGCACCGACCAGAGAGACAGGATGCGCAAGCCGTGCATCGATAGGGT
Found at i:13730736 original size:26 final size:26
Alignment explanation
Indices: 13730707--13730759 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13730697 CCAGTCCGAT
13730707 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
13730733 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
13730759 C
1 C
13730760 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:13731099 original size:899 final size:875
Alignment explanation
Indices: 13729106--13731258 Score: 2800
Period size: 899 Copynumber: 2.4 Consensus size: 875
13729096 CCTTGGTCCG
* * * * * * *
13729106 GTCTGATCTTAGACTGAGAATGAACTCTGTATGCATAAGCCAACCGACGAAACGAGCGGGGGGGA
1 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAATGAGCGGGCGGGC
* * * * * *
13729171 TGGCGAGCGGGCACTGCACCGACCAGAGAGACAGGATGCGCAAGCCGTGCATCGATAGGGTGGTA
66 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCTTG-ATCGATA-GGTGGTA
*
13729236 GGTGGGTTT-GGTCACATCTTCATATTTCTACTTGCCAATGCCATTTTTATGGCTTGGAAAATTC
129 GGTGGGTTTAGG-CACATCTTCATATTTCTACTTGCCAATGCCATTTTTATGGCTT-GTAAATTC
* * *
13729300 TTACAATGG-TCCTTTAAGCCTTGACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTTTC
192 ATACAATGGTTCC-TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* ** * *
13729364 TTGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGGCCC
256 ATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGG-CC
** * *
13729429 AAACTTGGT-GCACGTGATGATTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
320 AAACTTGGTAG-ACGTGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTCAGCTAAAAACTC
*
13729493 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTAC
384 GAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTAC
**
13729558 TGGCAGCAAACCTGTAAAATCTTGAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
449 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * *
13729623 GGATAGGGGGCTAATATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACCGCCCCC
514 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACCGACCCC
* * ** *
13729688 CTTGGCCCCCCGATCACCAGAACCCTAATGCCGCCGGTCAGGTTCTCTGGTGATGCTCCGGCGAT
579 C-TGGCCCCCCGATCACCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGAT
*
13729753 GGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCATAACC
643 GGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCATAACC
* * * * *
13729818 CTCGGTCTGGTCTGATCTTAGAATGGGAGTGAACTCCGTATGCCTAAGTCAACCCACGACATGAG
708 CTCGGTCTGGACTGATCTTAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAG
** * * *
13729883 CGTGCGGGCGCTCAGTCGGCCAAAGGGGCGGGATGAGCAAGTCGGGGATCGGCCGAGTCCCCCTC
773 CGTGCAAGCACTCAGTCGGCCAAAGGGGCAGGATGAGCAAGTCGGGGATCGACCGAGTCCCCCTC
* * * *
13729948 TGCGAGCTGCCAATCTTGCTGCCGCAACCCTCAGCCCA
838 TGCGAGCTACCAATCCTGCTACCACAACCCTCAGCCCA
** *
13729986 GTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCA-ACGAAATGAGCGGGCGGG
1 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-CAGACGAAATGAGCGGGCGGG
** * * * *
13730050 CGACCGGGCGGGCACTACGCCGGCCAGAAAGACGGGATGCGCAAGCCGTGGATCGGTAGCGTGGT
65 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCC-TTGATCGATAG-GTGGT
* * *
13730115 TGGTGGGTTTAGGCACATCTTTATATTTCTACTTGCCAATGCCATTTTTATGGCTAGTAAATTCA
128 AGGTGGGTTTAGGCACATCTTCATATTTCTACTTGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * * *
13730180 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAGGAGGACTCGTTTTCTATTTTTCAT
193 TACAATGGTTCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* *
13730245 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGAGACAA
258 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-GCCAA
* * *
13730310 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCGCAAAAAAATTCAGCTAAAAATTTGAA
322 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTCAGCTAAAAACTCGAA
*
13730375 GTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
387 GTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTACTGG
13730440 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
452 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
*
13730504 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA-C-ACCCCC-G
517 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACCGACCCCCTG
** * *
13730566 G-CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTG
582 GCCCCCCGATCACCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTG
* * *
13730630 CCCCGATGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGTAACCCTCG
647 CCCCGATGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCATAACCCTCG
13730695 GTCCAGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGC
712 GT-C--T--G------GACT--G-AT---CT---TA-G---A-A-TGGGAATGAACTCCGTATGC
* * *
13730760 CTAAGTCAACCCACAAAACGAGCGTGCAAGCACTCAGTTGGCCAAAGGGTCAGGATGTGCAAG-C
751 CTAAGTCAACCCACAAAACGAGCGTGCAAGCACTCAGTCGGCCAAAGGGGCAGGATGAGCAAGTC
* * * * * * * *
13730824 TGGGGATCGACCTAGTCTCCCTCTGCGTGCTACCGATCCTGCTACCATAACCCTCGGTCTA
816 -GGGGATCGACCGAGTCCCCCTCTGCGAGCTACCAATCCTGCTACCACAACCCTCAGCCCA
* * *
13730885 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAAAGATGAAATGAGCGAGCGGGC
1 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAATGAGCGGGCGGGC
* * *
13730950 GGGTGGGCGGGCACTACGTCGGCCAGAGAGACAGGATGCACAAGCCATTGATCGATAGGATGGTA
66 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCC-TTGATCGATAGG-TGGTA
* **
13731015 GGTGGGTTTAGGCACATCTTCATATTTCTA-TGTGACAATGTTATTTTTATGGCTTGTAAATTCA
129 GGTGGGTTTAGGCACATCTTCATATTTCTACT-TGCCAATGCCATTTTTATGGCTTGTAAATTCA
* *
13731079 TACAATGGTTCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCCTTTTCTATTTTTCAC
193 TACAATGGTTCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* ** * *
13731144 GATTTTTGAAACTTTTTATGGTTCCAGATTTTTTTAAATTTTTT-GGAAAGGAGTTTTGGCCCCA
258 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG-AAGGAGTTTTGG-GCCA
* * * * *
13731208 AACTTGGTAGACATGATCCGTGTATTTTTGTTGGAATGCATAAAAAAATTC
321 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTC
13731259 CAAGGATAGG
Statistics
Matches: 1100, Mismatches: 135, Indels: 57
0.85 0.10 0.04
Matches are distributed among these distances:
873 117 0.11
874 3 0.00
876 6 0.01
877 1 0.00
878 83 0.08
879 270 0.25
880 155 0.14
881 4 0.00
884 3 0.00
886 1 0.00
887 2 0.00
890 2 0.00
893 2 0.00
894 1 0.00
897 1 0.00
898 6 0.01
899 443 0.40
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (875 bp):
GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAATGAGCGGGCGGGC
GGGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCTTGATCGATAGGTGGTAGG
TGGGTTTAGGCACATCTTCATATTTCTACTTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
AATGGTTCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGGCCAAACTT
GGTAGACGTGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTCAGCTAAAAACTCGAAGTCT
ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGCCTACTGGCAGC
AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACCGACCCCCTGGCCC
CCCGATCACCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCC
GATGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCATAACCCTCGGTCT
GGACTGATCTTAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCAAG
CACTCAGTCGGCCAAAGGGGCAGGATGAGCAAGTCGGGGATCGACCGAGTCCCCCTCTGCGAGCT
ACCAATCCTGCTACCACAACCCTCAGCCCA
Found at i:13732908 original size:26 final size:27
Alignment explanation
Indices: 13732879--13732931 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 27
13732869 CTGATCTTAT
*
13732879 ACTGGAAATGATCTCCGTATG-CTAAG
1 ACTGGAAATGAACTCCGTATGCCTAAG
*
13732905 ACTGGGAATGAACTCCGTATGCCTAAG
1 ACTGGAAATGAACTCCGTATGCCTAAG
13732932 TCAACTCATG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
26 19 0.79
27 5 0.21
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (27 bp):
ACTGGAAATGAACTCCGTATGCCTAAG
Found at i:13733218 original size:402 final size:398
Alignment explanation
Indices: 13732454--13733223 Score: 941
Period size: 402 Copynumber: 1.9 Consensus size: 398
13732444 TGTGTTGCCA
* * * *
13732454 CAACCCTCGATCCGGTCTGATCTCAGACTGGGAATGAACTCCATATTCTTAGACTTGGAATGAAA
1 CAACCCTCGATCCGGTCTGATCTCAGACTGGAAATGAACTCCATATGCTAAGACTGGGAATGAAA
* * * * *
13732519 CTCCGTTATGCCTATGTCCAACCCCCGAAAACGAGCGTGCGGCGTAGCTCAGCCGGCTAGAGGGG
66 CTCCGTTATGCCTAAGTCCAACCCACGAAAACAAGCGTGCGGCGTAGCTCAACCGGCCAGAGGGG
* ** *
13732584 TGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCGCAACCCTCAGTCCGGT
131 CGGGATGCGCAAGCCGGGGATCGATCAAGTCCCCCTCTGCATGCTACCGCAACCCTCAGTCCAGT
* * * * *
13732649 CCAATCATAGACTGGGAATGAACTTTGTATGCCTAAGCCAACCTATGAAACAAGCGAGCGAACGG
196 CCAATCATAGACTAGGAATGAACTTCGTATCCCTAAGCCAACCGACGAAACAAGCGAGCG-ACGG
*
13732714 GCGGGCGGGCACTACGCCGGCCAGAAAGACGGATGCGTAAGCCGTGGATCGATAAGGTGGTAGGT
260 GCGGGCGGGCACTACGCCGGCCAGAAAGACGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGT
* * *
13732779 AGGTTTAGGCCCATCTTCATATTTCTGTGTACCAATGCCATTTATGGCTTGTAAATTCATAGAAT
325 AGGTTTAGGCACATCTTAATATTTCTATGTACCAATGCCATTTATGGCTTGTAAATTCATAGAAT
13732844 CTGCTGGCG
390 CTGCTGGCG
* * * * *
13732853 CAACCCTCGGTCCGGTCTGATCTTATACTGGAAATGATCTCCGTATGCTAAGACTGGGAATG-AA
1 CAACCCTCGATCCGGTCTGATCTCAGACTGGAAATGAACTCCATATGCTAAGACTGGGAATGAAA
* * *
13732917 CTCCG-TATGCCTAAGT-CAACTCATG-AAACAAGCGTGCGG-GT-GCTCAATCGGCCAGAGGGG
66 CTCCGTTATGCCTAAGTCCAACCCACGAAAACAAGCGTGCGGCGTAGCTCAACCGGCCAGAGGGG
13732977 CGGGATGCGCAAGCCGGGGATCGA-CTAAGTCCCCCTCTGTGTGC-TGCTGATCCTACTGCCACA
131 CGGGATGCGCAAGCCGGGGATCGATC-AAGTCCCCCTC----TGCATGCT-A--C--C-G---CA
* * * *
13733040 ACCCTCGGTCCAGTCCGATCTTAGACTAGTAATGAACTTCGTATCCCTAAGCCAACCGACGAAAC
182 ACCCTCAGTCCAGTCCAATCATAGACTAGGAATGAACTTCGTATCCCTAAGCCAACCGACGAAAC
* * * *
13733105 GAGCG-G-G-CGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
247 AAGCGAGCGACGGGCGGGCGGGCACTACGCCGGCCAGAAAGAC-GGATGCGCAAGCCGTGGATCG
* * * *
13733167 ATAGGGTGGTAGTTGGGTTTAGGCACATCTTAATATTTCTATGTGCCAATGCCATTT
311 ATAAGGTGGTAGGTAGGTTTAGGCACATCTTAATATTTCTATGTACCAATGCCATTT
13733224 TTATGAATTG
Statistics
Matches: 314, Mismatches: 42, Indels: 27
0.82 0.11 0.07
Matches are distributed among these distances:
392 1 0.00
393 48 0.15
394 2 0.01
395 13 0.04
396 10 0.03
397 14 0.04
398 7 0.02
399 54 0.17
401 31 0.10
402 71 0.23
403 1 0.00
404 1 0.00
405 61 0.19
ACGTcount: A:0.24, C:0.26, G:0.28, T:0.22
Consensus pattern (398 bp):
CAACCCTCGATCCGGTCTGATCTCAGACTGGAAATGAACTCCATATGCTAAGACTGGGAATGAAA
CTCCGTTATGCCTAAGTCCAACCCACGAAAACAAGCGTGCGGCGTAGCTCAACCGGCCAGAGGGG
CGGGATGCGCAAGCCGGGGATCGATCAAGTCCCCCTCTGCATGCTACCGCAACCCTCAGTCCAGT
CCAATCATAGACTAGGAATGAACTTCGTATCCCTAAGCCAACCGACGAAACAAGCGAGCGACGGG
CGGGCGGGCACTACGCCGGCCAGAAAGACGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTA
GGTTTAGGCACATCTTAATATTTCTATGTACCAATGCCATTTATGGCTTGTAAATTCATAGAATC
TGCTGGCG
Found at i:13733802 original size:26 final size:26
Alignment explanation
Indices: 13733773--13733825 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13733763 CCGATCTGAT
*
13733773 CTTAGACTGGGAATGAAGTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13733799 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13733825 C
1 C
13733826 CTAATTCAAT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13734704 original size:26 final size:26
Alignment explanation
Indices: 13734675--13734727 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
13734665 CCGGTCTGAT
*
13734675 CTTAGACTGGGAGTGAACT-CTGTATG
1 CTTAGACTGGGAATGAACTAC-GTATG
*
13734701 CTTAGATTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
13734727 C
1 C
13734728 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.15, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:13735592 original size:25 final size:26
Alignment explanation
Indices: 13735564--13735618 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
13735554 TCGATCCGAT
13735564 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
13735589 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13735615 CTTA
1 CTTA
13735619 AGTCAACCCA
Statistics
Matches: 28, Mismatches: 1, Indels: 1
0.93 0.03 0.03
Matches are distributed among these distances:
25 8 0.29
26 20 0.71
ACGTcount: A:0.27, C:0.18, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13736496 original size:26 final size:26
Alignment explanation
Indices: 13736467--13736517 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
13736457 CCGGTCCGAT
13736467 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
13736493 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
13736518 ACCTAACTCA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:13736787 original size:904 final size:901
Alignment explanation
Indices: 13732845--13739134 Score: 8343
Period size: 903 Copynumber: 7.0 Consensus size: 901
13732835 TCATAGAATC
* * * * * * *
13732845 TGCTGGCGCAACCCTCGGTCCGGTCTGATCTTATACTGGAAATGATCTCCGTATGCTAAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
13732910 GAATGAACTCCGTATGCCTAAGTCAACTCATGAAACAAGCGTGCGGGTGCTCAATC-GGCCAGAG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTC-AGCAGGCCAGAG
* *** * * * *
13732974 GGGCGGGATGCGCAAGCCGGGGATCGACTAAGTCCCCCTCTGTGTGCTGCTGATCCTACTGCCAC
130 GGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * *
13733039 AACCCTCGGTCCAGTCCGATCTTAGACTAGTAATGAACTTCGTATCCCTAAGCCAACCGACGAAA
195 AACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*
13733104 CGA----GCGGGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
260 CGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * ** *
13733165 CGATAGGGTGGTAGTTGGGTTTAGGCACATCTTAATATTTCTATGTGCCAATGCCATTTTTATGA
325 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
* * * *
13733230 ATTGCAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCCTTT
390 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
13733295 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTG
455 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * * * * *
13733360 GTTTGGCCCCAAACTTGGTAGGCCTAATCATTGTATTTTTATTGGCATGCACAAAAAAATTCAGC
520 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
13733425 TAAACACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAGACACTTT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * **
13733490 AATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTTGAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
*
13733555 TTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
715 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * *
13733620 ACACCCCCTGGCCCCCCCGATCGTCGGAACCCCAATACTGTCGGTCAGGTTCTCCGGCGATGCTC
780 ACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGC-C
* *
13733685 CGACGATGGTGCCTCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCATCATG
843 CGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * * *
13733744 TGCTACCGCAACCCTCGATCCGATCTGATCTTAGACTGGGAATGAAGTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * *
13733809 GAATGAACTCCGTATGCCTAATTCAATCCAGGAAACGAGCGTGCAGGTGCTCAGCCGACCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCAGGCCAGAGG
* * * * * *
13733874 GGCGGGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGATGCCAATCCTGCTGCTGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * *
13733939 ACCCACGATCCA-TCCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
196 ACCCTCGGTCCAGTCC-GATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
13734003 GGAGCGGGCGGGTGGGCGGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGAAAGCCGTGGAT
260 CGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * *
13734068 CGATAGGGTGGTAGGTGGGTTTAAGCAAATCTTCATATTTCTGAGTGCCAATGCCATTTTTATGG
325 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
* *
13734133 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGGAGTTTCATGGTAAGACGACTCGTTT
390 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * *
13734198 TCTATTTTTAACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTGAAATTTTTTCGGAAAGAG
455 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * * **
13734263 TTTTGGCCCCAAACTTAGCAAATATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
520 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
13734328 TAAAAACTCGAAGTGTACAAGAATTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
13734393 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
*
13734458 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-CTACACATCATGTGCG
715 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCACATCATGTGCG
* * ** * * *
13734522 CACACCCCCCGGCCCCCCGATCGCCAGAACCCCAATGCCACCAGTCAGGTTCTCTGGCGATGCTC
779 CACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGC-C
* * *
13734587 TGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATACTCGAGCCCAGCATG
843 CGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * * * * *
13734646 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAGTGAACTCTGTATGCTTAGATTGG
1 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
13734711 GAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGTGCTCAGCTGACCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCAGGCCAGAGG
* * * * *
13734776 GGCGGGATGCGCAAGCCGGGGATCGACTGGGTCTCCCTCTGCGTGCTGCTGATCCTACTGCCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * *
13734841 ACCCTCAGTCC-GATCCAATCTTAGACTAGGAATGAACTTCGTATGACTAAGCCAATCGACGAAA
196 ACCCTCGGTCCAG-TCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * * *
13734905 CGAGCGGGCGGTCGGGCGGGCGGACACTATGCCGGCCAGAGAGATGGGATACGCAAGCCGTGGAT
260 CGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
**
13734970 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGG
325 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
*
13735035 CTTGTAAATTCATACAATGTTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
390 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * *
13735100 TCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAT
455 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
*
13735165 TTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAAATTCAGC
520 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
13735229 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
13735294 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
* * * * * *
13735359 ATTGATGAGGGAAAGGGGGCCAAAATAAGGGCCAAGTACCAGCATCCATCACACATCATGTGCGA
715 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* *
13735424 ACACCCCCCGGCCCCCCGATCGTCGGAA-GCCAATGCCGTCGGCCAGGTTCTCCGACGAT----G
780 ACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCCCG
* * * ** *
13735484 --G-TGCGT---CAG-CAAAGAAAAATGCAGCACCAACACATATCCGAGCCCAACATG
845 ACGATG-GTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * *
13735535 TTCTGTCGCAACCCTCGGTTCGATCCGATCTTAGACT-GGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * ** * * *
13735599 GAATGAACTCTGTATGCTTAAGTCAACCCATAAAATGATCGTGCGGGTGCTCAGCTGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCAGGCCAGAGG
* *** * * * * *
13735664 GCCACAATGCGCAAGCCGGGGATCGGCCGGGTCCCACTCTGTGTGCTGTCGATCTTGCTGCCACA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * **
13735729 ACCCTTGGTTCGGTTTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
196 ACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
** * * * *
13735794 GAGCGGGTAGGCGGGCGGGTGGGCACTACGCCGACCAGAGAGACGAGATGCGCAAGCCGTGGATC
261 GAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* *
13735859 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCAAATGCCATTTTTATGGC
326 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
*
13735924 TGGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
391 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * * *
13735989 CTATTTTTCATGATTTTGGAAACTTTTTGCGGTTCAGGATTTTTCAAAATTTTTTCGGAAGGTGT
456 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * * *
13736054 TTTGGCCCCAAACTTGGTAGACGTGATCCATT-TTTTTTTCTTGGCATGCACAAAAAAACTCAAC
521 TTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * *
13736118 TAAAAACTCGAAGTTTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACATT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * **
13736183 AATGGCTACTGGCAGCAAACCTATAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
* *
13736248 TTTGATGAGAGATAGGGGGCCAAATATAAGGGCCAAGTACCAGCACCCATCGAACATCATGTGCG
715 TTTGATGAGGGATAGGGGGCC-AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * *
13736313 CACACCCCCTCGGCCCCCTGATCGTCAGAACCCCAATGTCGTCGGTCAGGTTCTCCGACGATGCA
779 CACACCCCC-CGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGC-
* ** *
13736378 CC-AGTGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACTCATGCCCGAGCCCAGCATG
842 CCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * * *
13736438 TGCTGTCGTAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
13736503 GAATGAACTCCGTATACCTAACTCAACCCACGAAACGAGTGTGTGGGTGCTCAGCAGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCAGGCCAGAGG
* * **
13736568 GGCGGGATGCACAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCAGCCGATCCTATTGCCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *
13736633 ACCCTTGGTCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAAC
196 ACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* *
13736698 AAGCGGGCGGGCGGGTGGGCGGGCACTACGTCGGCCCA-AGAGACGGGATGCGCAAGCCGTGGAT
261 GAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGG-CCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * *
13736762 CAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGG
325 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
* * **
13736827 CTTGTAAATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATTGTGAGACGACTCGTTT
390 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * *
13736892 TCTATTTTTCACGATTTTTGAAAATTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAG
455 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * *
13736957 TTTTGGCCCCAAACTTGGTAGACCTGATCCTTGTATTTTTTTTGGTATGCACAAAAAAATTCAGC
520 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
13737022 TAAAAACTCGAAGTGTACAAAATTTTGTGACCAATTGAAAAAAGTGTCCCCATTTCA-ACACTTT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
13737086 AATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTGTCAAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
* * *
13737151 TTTGATGAGGGATAGGGGACCAATATATGGGCCAAGTATCAGCACCCATCGCACATCATGTGCGC
715 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * *
13737216 ACACCCCCCCGACCCCCCCGATCATCGAAACCCCAATGCTGTCGGTCAGGTTCTCCGGCGATGCT
780 ACA-CCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGC-
**
13737281 TTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
842 CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* ** * * *
13737341 TGCTGTCGCAACCCTCGGTATGATCCAATCTTAGAATGGGAATGAACTCTGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
13737406 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGTGCTCAGCCA-ACCAGAG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAG-CAGGCCAGAG
* ** * * * *
13737470 CGGCGGGATGCGCAAGCTAGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATGCTGCTGCCGT
130 GGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* ** * * * * *
13737535 AACCCTCAGTCTGGTCTGATCTTGGACTGGGAGTGAACTCCGTATGCCTAAGCCAACCGATGAAA
195 AACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* ** ** *
13737600 CGA--------GCAGGCGGGCGGGCACTACACCAACCAGAGAGATGGGATGCGCAAGCCGTGGAT
260 CGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * * *
13737657 CGATAGGGTGGTAGGTGGGTTTAGGTATATCTTCATCTTTCTGCATGCCAATGCCATTTTTATGG
325 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
* * *
13737722 CTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCACGGCAAGACGACTCATTT
390 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * **
13737787 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGACTTTTTTTTAATTTTTAT--G--GG
455 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTT-TCGGAAGG
* *
13737848 AGTTTTGGCCGCAAACTTGGTAGACCGTGATCCTTTGTATTTTTGTTGGCGTGCAC-AAAAAATT
518 AGTTTTGGCCCCAAACTTGGTAGA-CGTGATCC-TTGTATTTTTGTTGGCATGCACAAAAAAATT
* *
13737912 CAGCT-AAAACTCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-CCCCATTTTAGACA
581 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
13737975 ATTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGTTTGGTGAGTTC
646 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG-GT-GTGAGTTC
13738040 TCAAAGG-TTGATGAGGGATAGGGGGCCCAATATAAGGGGCCAAGTACCAGCAACCCATGCGCAC
709 TC-AAGGTTTGATGAGGGATAGGGGG-CCAATATAA-GGGCCAAGTACCAGC-ACCCAT-CGCAC
* * * *
13738104 ATTCATGTACGCACACCCCCCCAGCCCCGCTGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
769 A-TCATGTGCGCACA-CCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
** * *
13738169 TCCGACGATGCTCCGATTATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCC
831 TCCGACGATGC-CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCC
13738234 CAGCATG
895 CAGCATG
* *
13738241 TGCTACTGCAA-CC-C--T-CG----G-TC-----C---G---G---TCCG-AT-CTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
13738280 GAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCATGCGGGTGCTCAGCCGGCTAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCAGGCCAGAGG
* ** * *
13738345 GGCGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTATCGATCTTGCTGCCGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* ** * * *
13738410 ACCCTC-ATCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAAT
196 ACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * ** *
13738474 GAGCGGGCGGGCGGACGGACGGGCACTATG-CTGGTTAGAGAGATGGGATGCGCAAGCCGTGGAT
261 GAGCGGGCGGGCGGGCGGGCGGGCACTACGTC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* **
13738538 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATTT
325 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
**
13738603 CTTGTAAATTCATACAATCTTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
390 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * *
13738668 TCTATTTTTCATGATTTTTGACACTTTTTGCGGTTTGGGATTTTTTAAAATATTTTCGGAAGGAG
455 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * *
13738733 TTTTGGCCCTAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATACAGC
520 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * * *
13738798 TAAAAACTCGGAGTGTGCAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGATACTTT
585 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
13738863 AATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTAAGTTCTCAAGG
650 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
*
13738928 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGC
715 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * * * *
13738993 GCACCCCCCGACCTTCCTCGATCGCCGGAACCCTAATACCGTCAGTCAGGTT-T-------T--T
780 ACACCCCCCGGCC--CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCC
** ** *
13739048 CGACGATGGTG-CCCGGTGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATG
843 CGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
*
13739106 TGCTGCCGCAACCCTTGGTCCGATCCGAT
1 TGCTGCCGCAACCCTCGGTCCGATCCGAT
13739135 GGGTTGACTT
Statistics
Matches: 4749, Mismatches: 560, Indels: 188
0.86 0.10 0.03
Matches are distributed among these distances:
865 53 0.01
866 11 0.00
869 2 0.00
870 2 0.00
873 52 0.01
874 131 0.03
875 3 0.00
876 12 0.00
877 40 0.01
878 8 0.00
879 8 0.00
880 28 0.01
881 234 0.05
882 48 0.01
883 64 0.01
884 61 0.01
888 457 0.10
889 233 0.05
890 51 0.01
891 18 0.00
892 39 0.01
893 122 0.03
894 24 0.01
895 246 0.05
896 26 0.01
897 15 0.00
898 12 0.00
899 234 0.05
900 149 0.03
901 235 0.05
902 638 0.13
903 956 0.20
904 534 0.11
905 3 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (901 bp):
TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCAGGCCAGAGG
GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
ACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
GAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
CACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCCCGA
CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
Found at i:13737406 original size:26 final size:26
Alignment explanation
Indices: 13737370--13737422 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13737360 ATGATCCAAT
*
13737370 CTTAGAATGGGAATGAACTCTGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
*
13737396 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
13737422 C
1 C
13737423 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:13739184 original size:26 final size:26
Alignment explanation
Indices: 13739147--13739199 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13739137 GTTGACTTAG
13739147 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
13739173 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
13739199 G
1 G
13739200 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:13739652 original size:27 final size:26
Alignment explanation
Indices: 13739622--13739681 Score: 66
Period size: 26 Copynumber: 2.3 Consensus size: 26
13739612 ACTCCTTCCG
* * *
13739622 AAAAAATTTAAAAAAATCCTGAACAGT
1 AAAAAATTT-AAAAAATCATGAAAAAT
* *
13739649 AAAAAGTTTCAAAAATCATGAAAAAT
1 AAAAAATTTAAAAAATCATGAAAAAT
13739675 AAAAAAT
1 AAAAAAT
13739682 GAGTCATCTT
Statistics
Matches: 27, Mismatches: 6, Indels: 1
0.79 0.18 0.03
Matches are distributed among these distances:
26 19 0.70
27 8 0.30
ACGTcount: A:0.63, C:0.08, G:0.07, T:0.22
Consensus pattern (26 bp):
AAAAAATTTAAAAAATCATGAAAAAT
Found at i:13740078 original size:26 final size:26
Alignment explanation
Indices: 13740049--13740101 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13740039 GTTGACTTAG
*
13740049 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
13740075 GCATACAGAGTTCTTTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
13740101 G
1 G
13740102 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:13746678 original size:26 final size:26
Alignment explanation
Indices: 13746642--13746694 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
13746632 GTTGACTTAG
13746642 GCATACGGAGTTCATT-CCTAGTCTAA
1 GCATACGGAGTTCATTACC-AGTCTAA
13746668 GCATACGGAGTTCATTACCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
13746694 G
1 G
13746695 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTACCAGTCTAA
Found at i:13748264 original size:867 final size:866
Alignment explanation
Indices: 13746601--13753579 Score: 7440
Period size: 867 Copynumber: 7.9 Consensus size: 866
13746591 GTCCCTCTGG
** *** *
13746601 CCGGCTGAGCGCCCGCACGCTCGTTTTGGGGGTTGACTTAGGCATACGGAGTTCATTC-CTAGTC
1 CCGGCTGAGCGTACGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCTC-AGTC
* * *
13746665 TAAGCATACGGAGTTCATTACCAGTCTAAGATCGGACCAGACAGAGGGTTACGGCAACACATGCT
65 TAAGCATACGGAGTTCATT-CCAGTCTAAGATCGGACCGGACAGAGGGTTGCGGCAGCACATGCT
* * * *
13746730 GGGCTCGGTCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCAT---C---G-----CCGG
129 AGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGG
* * ** * * *
13746784 AGAACCTGACCGACGGCATTGGGGTTCTGGCGTTCGGGGGGGCCGAGGGGGGTGTACGTACATGA
194 AGAACCTGACAGACGGCATTGGGGTTCCGGCAATC-GGGGGGCCGGGGGGGGTGTGCGCACATGA
* * *
13746849 TGTGCAATGGGTTCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAAC
258 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
13746914 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
323 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
13746979 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG-TTTTAGCTGGATGTT
388 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-TT
* *
13747043 TTTT-TGCATGCCAACAAAAATACAAGGATCACGTCTTCCAAGTTTGGGGCCAAAACTTTTTTCG
452 TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTTCG
* * * *
13747107 AAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCAAAAAAAATAGAAAACGGGTT
517 AAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGAGAAAAATAGAAAACGAGTC
*
13747172 GTCTTGCCATGAAACTTCACGTGAAGGCTTAGGGGACCATTGTATGAATTTACAAGCCATAAAAA
582 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*
13747237 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGC
647 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
**
13747302 TTGCGCATCCTGTCTCTCTGGCTAACGTAGT-GCCCGCCCATTCGTTTCGTCGGTTGGCTTAGGC
712 TTGCGCATCCTGTCTCTCTGGCCGACGTAGTCGCCCGCCCATTCGTTTCGTCGGTTGGCTTAGGC
* * * * *
13747366 ATACGGAGTTCATTCCCAGTCTAACATCAGACCAGATCGAAGGTTGCAGTAGTAGGATCGGTAGC
777 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGTAGCAGGATCGGCAGC
*
13747431 ACGCAGAAGGGTACCCGACCCATCC
842 ACGCAGAAGGGGACCCGACCCATCC
* * *
13747456 CCGGCTGAGCGTACGCACACTCATTTCATGGGTTGACTTAGGCATATAGAGTTCATTCTCAGTCT
1 CCGGCTGAGCGTACGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCTCAGTCT
* * * **
13747521 AAGCAAACGAAGTTCATTCGCAGTCTAAGATCGGATCGGACAGAGGGTTGCAACAGCACATGCTA
66 AAGCATACGGAGTTCATTC-CAGTCTAAGATCGGACCGGACAGAGGGTTGCGGCAGCACATGCTA
**
13747586 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGA
130 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGA
* *
13747651 GAACCTGACAGGCGGCATTGGGGTTCCGGTAATCGGGGGGCCGGGGGGGGTGTGCGCACATGATG
195 GAACCTGACAGACGGCATTGGGGTTCCGGCAATCGGGGGGCCGGGGGGGGTGTGCGCACATGATG
* *
13747716 TGCGATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTC
260 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
13747781 ACA-CCCCTTAAAGAGCATTTGAGATTTTATAGGTTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
325 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGG-TTTGCTGCCAGTAGCCATTAAAGTGTCTGA
*
13747845 AATGGGGACACCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGGATGTT
389 AATGGGGACA-CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-TT
* *
13747910 TTTT-TGCATGCCAACAAAAATACAAGGATCACGTCTTCCAAGTTTGGGGCCAAAACTTTTTTCG
452 TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTTCG
* * *
13747974 AAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGAAAAAAATAGAAAACGGGTT
517 AAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGAGAAAAATAGAAAACGAGTC
*
13748039 GTCTTGCCATGAAACTTCACGTGAAGGCTTAGGGGACCATTGTATGAATTTACAAGCCATAAAAA
582 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*
13748104 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGC
647 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
**
13748169 TTGCGCATCCTGTCTCTCTGGCTAACGTAGT-GCCCGCCCATTCGTTTCGTCGGTTGGCTTAGGC
712 TTGCGCATCCTGTCTCTCTGGCCGACGTAGTCGCCCGCCCATTCGTTTCGTCGGTTGGCTTAGGC
* * * * * *
13748233 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCAACGGTTGCAGCAGTAGGATCGGTAGC
777 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGTAGCAGGATCGGCAGC
13748298 ACGCAG-AGGGGTACCCGACCCATCC
842 ACGCAGAAGGGG-ACCCGACCCATCC
*
13748323 CCGGCTGAGCGTACGCACGCTCGTTTCATGGGTTGACTTAGGCATATAGAGTTCATTCTCAGTCT
1 CCGGCTGAGCGTACGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCTCAGTCT
* * * **
13748388 AAGCAAACGAAGTTCATTCGCAGTCTAAGATCGGATCGGACAGAGGGTTGCAACAGCACATGCTA
66 AAGCATACGGAGTTCATTC-CAGTCTAAGATCGGACCGGACAGAGGGTTGCGGCAGCACATGCTA
**
13748453 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGA
130 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGA
* *
13748518 GAACCTGACAGGCGGCATTGGGGTTCCGGTAATCGGGGGGCCGGGGGGGGTGTGCGCACATGATG
195 GAACCTGACAGACGGCATTGGGGTTCCGGCAATCGGGGGGCCGGGGGGGGTGTGCGCACATGATG
* *
13748583 TGCGATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTC
260 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
13748648 ACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAA
325 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
13748713 ATGAGGACACTTTTTTCAAATGGTCACAAAATCTTGAACACTTCAAGTTTTTAGCTGAATTTTTT
390 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * *
13748778 TGTGCTTGCGAACAAAAATACAAGGATCACGTCTACCAACTTTGGGTCCAAAAC-TCCTTCTGAA
455 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTTC-GAA
* * ** *
13748842 AGAATTTTAAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGT
519 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGAGAAAAATAGAAAACGAGTCGT
*
13748907 CTTGCCATGAAACTTCACGTGAAGGCTTAAGAGACCATTGTATGAATTTACAAGCCATAAAAATG
584 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
13748972 GCATTGGCATGTAGAAATATGAAGATGTACCTAAATCCACCTACCACCCTATCGATCCACGGCTT
649 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * *
13749037 GTGCATCCCGTCTCTCTGGCCGACATAGTGCCCGCAAGCCCGCCTGCCCACTCTTTTCATCGGTT
714 GCGCATCCTGTCTCTCTGGCCGACGTAGT-----C--G--C-CC-GCCCATTCGTTTCGTCGGTT
* ** * * *
13749102 GGCTTAGGCATACGGAGTTCATTCCCAGTCTATGATTGGACCGGACCGAGGGTTACGGTAGCAGG
768 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGTAGCAGG
* *
13749167 ATCGGTAGCACGCAGAGGGGGACCCGGCCGATCCCCAACTTGCGCATCCCGCCCCTC
833 ATCGGCAGCACGCAGAAGGGGA--C--CCG-------AC---C-CAT-------C-C
** * * *
13749224 TGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAG-TCATTCCCAG
1 ---CCGGCTGAGCGTACGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCTCAG
* * * * *
13749288 TCTAAGCATATGGAGTTCAATCCCAGTCTAAGATCGAACCGGACCGAGGGTTGCGGCAGCAAATG
63 TCTAAGCATACGGAGTTC-ATTCCAGTCTAAGATCGGACCGGACAGAGGGTTGCGGCAGCACATG
* * * **
13749353 CTGGGCTCGGGCATGTGCTGGT-ACAGCATTTTTCTTCGTCGGGGCACCATCGCAGGAGCATCGT
127 CTAGGCTCGGGCATGTGCTGGTGCCA-CATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCAC
* * * * * * ** *
13749417 TGGAGAACCTGACCGACGGCATTGGGGTTTCGCCGATCGGGGGGGCC--GAGGGGTACGCACACA
191 CGGAGAACCTGACAGACGGCATTGGGGTTCCGGCAATC-GGGGGGCCGGGGGGGGTGTGCGCACA
* ** *
13749480 TGATATGCGATGGGTGCTCATACTTGGCCCTTATATTGGCCCCCTATCCCTCACCAAACCTCGAG
255 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
*
13749545 AACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGT
320 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
** *
13749609 CAAAAATGAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-A-
385 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * * *
13749672 TTCTTTGTGCATGCCAA-AAAAATACAAGGATCA-ATCTACCAAGTTAGGGGCCAAAAC-TCCTT
450 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTT
* * * *
13749734 CGAAAAAAATTTAAAAAATCTCGAACCAGTAAAAAGTTTC-AAAATCG-TAAAAATAGAAAACGA
515 CGAAAAAATTTTAAAAAATCCCGAACC-GCAAAAAGTTTCAAAAATCGAGAAAAATAGAAAACGA
* *
13749797 GTCGTCTTG-CATGAAATTTCACGTGAAGGCTTAAGGGACGCATTGTATGAATTTACAAGCCACA
579 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC-CATTGTATGAATTTACAAGCCATA
*
13749861 AAAATGGCGTTGGCCA--CAGAAATATTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
643 AAAATGGCATTGG-CATGCAGAAATA-TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * *
13749924 CACGGCTTGCGCATCCCGCCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCTGCTTGTTTCGTC
706 CACGGCTTGCGCATCCTGTCTCTCTGGCCGACGTAGT---CGCCCGCCCAT-T-C--GTTTCGTC
* * * * * *
13749989 GGTTGGCTTAGGCAAACGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAG
764 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGTAG
* * ** * *
13750054 CAGGATCTGCAGCACGCAGATGGGGACTTGGCCGATCC
829 CAGGATCGGCAGCACGCAGAAGGGGACCCGACCCATCC
* * * * * ** * * * *
13750092 CCGACT-TGCGCATCCCACCCCTC-TGGCA--GGTTGAGC---GCCCGTAC---GCTCGTTTCGT
1 CCGGCTGAGCGTA-CGCA-CGCTCGTTTCATGGGTTGA-CTTAG-GCATACAGAGTTC-ATTC-T
** * * * * * *
13750147 GGGTTGACTTAGGCATACGGAGTTCATTCCTAATCTAAGATCAGACCAGACCGAGGGTTGCGGTA
60 CAG-T--C-TAAGCATACGGAGTTCATTCC-AGTCTAAGATCGGACCGGACAGAGGGTTGCGGCA
** * * * **
13750212 GCACAATTATTA-GCTCGGGCATGTGCTGGTGCCATATTTTTCTTCATCGCGGCACCATCATCGG
120 GCAC-A-TGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGG
* * * * * * * *
13750276 AGCATCGCTGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGAGGGGCC-GAGGGGGTGT
183 AGCATCACCGGAGAACCTGACAGACGGCATTGGGGTTCCGGCAATCGGGGGGCCGGGGGGGGTGT
* * * * *
13750340 GCGCACATGATGTGC-AGTGGTTGCTGGTACTTGGCCCCTATATTGGGCCTCTATCCCTGATCAA
248 GCGCACATGATGTGCGA-TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * * *
13750404 ACCTCAAGAACT-AGCACCCCCTTAAATAGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCCA
312 ACCTCGAGAACTCA-CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * *
13750468 TTAAAATGTCTGAAATGGGGACACTTTTTTCAAATGCTCACAAAATCTTGTACACTTCAAGTTTT
376 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * *
13750533 TAGCTGAATTGTTTTGTGCATGCTAACAAAAATACAAGGATCACGTTTACCAAGTTTGGGGCCAA
441 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * * * * *
13750598 AA-ATCATTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAGAGTTTCGAAAATCGTGAAAAAT
506 AACTTC-TTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGAGAAAAAT
* * *
13750662 AGAAAACGAGTCGTCTTGCCATGAAACTTGACATGAAGGATTAAGGGACCATTGTATGAATTTAC
570 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
** *
13750727 AAGTGATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAACCACCTACCA-CCTA
635 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * * ** * *
13750791 TCGATCCATGGCTTACGCATCCTGTCTCTCTGGCCGACATAGTGCCTGCCCGCCCGCTCATTTCC
700 TCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGACGTAGT--C-GCCCGCCCATTCGTTTCG
* * *
13750856 TCGGTTGGCTTAGGTATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGAAT-GAGGGTTGCGA
762 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ATCGAGGGTTGCGG
* * * *
13750920 CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCC
826 TAGCAGGATCGGCAGCACGCAGAAGGGGACCCGACCCATCC
* * * ** * *** * * * *
13750961 CCGGCTTGTGCAT-C-CTAC-C-C--CTC-T-GGCCGACTGAGCGCCCGCA-CGCTCGTTTCGTG
1 CCGGC-TGAGCGTACGC-ACGCTCGTTTCATGGGTTGACTTAG-GCATACAGAGTTC-ATTC-TC
* * * ** *
13751017 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATTGGACCGAGGGTTGCGGCAG
61 AG-T--C-TAAGCATACGGAGTTCATT-CCAGTCTAAGATCGGACCGGACAGAGGGTTGCGGCAG
* * * **
13751082 CACATGCTGGGCTCGGGGATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCATCGGAGC
121 CACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGC
* *
13751147 ATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCAATCGGGTGGGCCGAGGGGGGTGTGC
186 ATCACCGGAGAACCTGACAGACGGCATTGGGGTTCCGGCAATCGGG-GGGCCGGGGGGGGTGTGC
* * *
13751212 GCACATGATGTGCGATGGCTGCTGGTACTTGGCACTTATATTGGCCCCCTATCGCTCATCAAACC
250 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
13751277 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
315 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
13751342 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
380 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * *
13751407 TGAATTTTTTTATGCATGCCAACAAAAGTACAAGGATCATGTCTACCAAGTTTTGGGGCCAAAAC
445 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG-TTTGGGGCCAAAAC
* * * * * * **
13751472 TCCTTCCAAAAAAATTTTAAAAAATCCCGAATCGTAAAAATTTTTGAAAATC-ATGAAAAATAGA
509 TTCTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGA-GAAAAATAGA
13751536 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
573 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * * * * *
13751601 CCATAAAAATGGCATTGGCACGCAAAAATATGTAGATGTCCCCAAACACACCTACCACCCTATCG
638 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * **
13751666 ATCCACGACTTGCGC--CC-GTTTCTCTGGCCGACGTAGTGCCTGTCCTCCCGCCCGCCCGCTCG
703 ATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGACGTA------G---T--CGCCCGCCCATTCG
* * * * *
13751728 TTTCGTTGGTTGGCTTAGGCATACGGTGTTCATTCCCAGTCTAAGATC-GAACTGAACTGAGGGT
757 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATC-GAGGGT
* * *
13751792 TGTGGTAGCAGGATTGGCAGCATGCA-AAGGGGGACCCGACCGACCCTCGACTTACGCATCCCGC
821 TGCGGTAGCAGGATCGGCAGCACGCAGAA---GG----G---GA-CC-CGAC---C-CAT-----
13751856 CC
865 CC
* *
13751858 CTCTGGCCGGTTGAGCG-CCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC-GAAGGTT-AT
1 C-C-GG-C---TGAGCGTAC-GCACGCTCGTTTCATGGGTTGACTTAGGCATACAG-A-GTTCAT
* *
13751920 T-TCTAGTCTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGATC-GATCCA-AGGGTTGCGG
57 TCTC-AGTCTAAGCATACGGAGTTCATT-CCAGTCTAAGATCGGACCGGA--CAGAGGGTTGCGG
* * * * *
13751982 TAGCACATGCAAGGCTCGGGCATGCGCTGGTGCCATATTTTTCTTCGTCGGGGCACCATCGTCGG
118 CAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGG
* * ** * * ** * * *
13752047 AGGATCGCCAAATAACCTGACCGACAACATT-GGGTTCCGACGATCGGGGGGGCC-AGGGGGGTG
183 AGCATCACCGGAGAACCTGACAGACGGCATTGGGGTTCCGGCAATC-GGGGGGCCGGGGGGGGTG
* *
13752110 TGCTCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAA
247 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
13752175 GCCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
312 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
13752240 TAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGCTCACAAAATCTTGTACAC-T----TTTTT
377 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * *
13752300 -CCTGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGATCACGTCCACCATGTTTGGGGCCAAA
442 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * * * *
13752364 ACTCCATTCGAAAAAATTTTAAAGAATCCCAAAGCACAAAAAGTTTCAAAAATCGTGAAAAATAG
507 ACTTCTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGAGAAAAATAG
* * *
13752429 AAAACGAGTCGTCTTGCCATGAAACTTTACGTGAAGGCTTAAGGTATCATTGTATGAATTTACAA
572 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * *
13752494 GCCATAAAAATGGCATTGCCATACAGAAATATGAAGATGTCCCTAAACCCACCTACCACCCTATC
637 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * *
13752559 GATCTACGGCTTGCGCATCCTGCCTCTCTGGCTGGCGTAGTGCCCACCCGCCCGCCCACCTGCTC
702 GATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGACGTAGT-------CGCCCGCCCA--T--TC
* * **
13752624 GTTTCGTCGGTTGGCTTAGGCATATGAAGTTCATTCCCCAGTCT-AGATTGGA-CA-ATCGAGGG
756 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT-CCCAGTCTAAGATCAGACCAGATCGAGGG
* *
13752686 TTGCGGTAGCAAAGATC-GCAAGCCCACGCAGAGGGGGACCCTGACCGC-TCC
820 TTGCGGTAGC-AGGATCGGC-AG--CACGCAGAAGGGGACCC-GACC-CATCC
* * *
13752737 CTGGGGTTACGCATCCCTACCCCCTCTGGCCGACTGAGCAGCTGTACGC-CGTTTCGTGGGTTG-
1 C---CG----GC-T---GA---------G-CG--T-A-C-GC---ACGCTCGTTTCATGGGTTGA
* * * * **
13752800 CTTAGGCAT-CAAAGTTCATTCCCAATCTAAGCAAACGG-GTTCATTTCCACGTCTTGGATCGGA
37 CTTAGGCATACAGAGTTCATTCTCAGTCTAAGCATACGGAGTTCA-TTCCA-GTCTAAGATCGGA
* * ** * * * **
13752863 CCAGACTGAGGGTTGATGTAGCCCATGCT-GGCCTCGGGCATATGCTGGTGCCACACATTT-TTC
100 CCGGACAGAGGGTTGCGGCAGCACATGCTAGG-CTCGGGCATGTGCTGGTGCCACATTTTTCTTC
* * * * *
13752926 -T-------TCA-C-CC-G-G----A---GA-AACCTGACCGACAGCATTGGGGTTCCTGACGAT
164 GTCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACAGACGGCATTGGGGTTCC-GGCAAT
* * * * * *
13752971 AGACAGGGGTCGGGGGGTGG-GTGCGCACGTGATGTGGCGATGGGTGCTTGAACTTGGCCCTTAA
228 CG--GGGGGCCGGGGGG-GGTGTGCGCACATGATGT-GCGATGGGTGCTGGTACTTGGCCCTT-A
*
13753035 TATTGGCCCCCTTATCCCTCATCAAACCTCGAG-ACTTACACCCCCTTAAAGAGCATTTGAGATT
288 TATTGGCCCCC-TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
* *
13753099 CTAACAGGTTGTGGCTGCCAGTCAGCCATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGG
352 -TTACAGGTT-T-GCTGCCAGT-AGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
* * *
13753164 TCGCAAAATCTTGCACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCC-ACAAAAATACAA
413 TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
* ** * * * ***
13753228 GGATCATGTCTACCAAGTTTAAGGCCAAAACATCTTCCGAAAAACTTTTAAAAAATCTTAAACCG
478 GGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
* * * *
13753293 TAAAAAGTTTCAAAAATC-ATGAGAAATAGAAAATGAGTCGTCTTGCCATGAAACATCACGTGAA
543 CAAAAAGTTTCAAAAATCGA-GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAA
13753357 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
607 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAA
* * * *
13753422 GATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTACGGATCCCGTCTCTCTGGCCGA
672 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGA
* * * * *
13753487 CGTAGTGCCCGCCCGCCCGTCCGCTTGTTTTGTCAGTTGGCTTAGGCATATGGAGTTCATTCCCA
737 CGTAGT---CGCCCGCCCAT----TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * *
13753552 GTCTAAGATCGGATCGGATCGAGGGTTG
795 GTCTAAGATCAGACCAGATCGAGGGTTG
13753580 TGGCAGCACA
Statistics
Matches: 5308, Mismatches: 561, Indels: 474
0.84 0.09 0.07
Matches are distributed among these distances:
854 1 0.00
855 152 0.03
856 1 0.00
858 1 0.00
859 1 0.00
860 2 0.00
861 5 0.00
862 5 0.00
863 7 0.00
864 34 0.01
865 162 0.03
866 438 0.08
867 943 0.18
868 238 0.04
869 194 0.04
870 251 0.05
871 199 0.04
872 56 0.01
873 86 0.02
874 84 0.02
875 36 0.01
876 8 0.00
877 86 0.02
878 107 0.02
879 18 0.00
880 9 0.00
881 6 0.00
882 20 0.00
883 28 0.01
884 44 0.01
885 30 0.01
886 4 0.00
887 19 0.00
888 76 0.01
889 62 0.01
890 3 0.00
891 100 0.02
892 4 0.00
893 263 0.05
894 256 0.05
895 190 0.04
896 48 0.01
897 92 0.02
898 49 0.01
899 91 0.02
900 16 0.00
901 313 0.06
902 109 0.02
903 278 0.05
904 61 0.01
905 1 0.00
906 2 0.00
907 3 0.00
908 6 0.00
909 8 0.00
910 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (866 bp):
CCGGCTGAGCGTACGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCTCAGTCT
AAGCATACGGAGTTCATTCCAGTCTAAGATCGGACCGGACAGAGGGTTGCGGCAGCACATGCTAG
GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAG
AACCTGACAGACGGCATTGGGGTTCCGGCAATCGGGGGGCCGGGGGGGGTGTGCGCACATGATGT
GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTTCGAAAA
AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGAGAAAAATAGAAAACGAGTCGTCT
TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
GCATCCTGTCTCTCTGGCCGACGTAGTCGCCCGCCCATTCGTTTCGTCGGTTGGCTTAGGCATAC
GGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGTAGCAGGATCGGCAGCACGC
AGAAGGGGACCCGACCCATCC
Found at i:13749296 original size:25 final size:26
Alignment explanation
Indices: 13749268--13749319 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13749258 GTTGACTTAG
*
13749268 GCATACGGAG-TCATTCCCAGTCTAA
1 GCATACGGAGTTCAATCCCAGTCTAA
*
13749293 GCATATGGAGTTCAATCCCAGTCTAA
1 GCATACGGAGTTCAATCCCAGTCTAA
13749319 G
1 G
13749320 ATCGAACCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 9 0.38
26 15 0.62
ACGTcount: A:0.29, C:0.25, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTTCAATCCCAGTCTAA
Found at i:13751953 original size:26 final size:26
Alignment explanation
Indices: 13751902--13751955 Score: 65
Period size: 26 Copynumber: 2.1 Consensus size: 26
13751892 TGGGTTGACT
* *
13751902 TAGGCATACGAAGGTTATTTCTAGTC
1 TAGGCATACGAAGGTTATTCCCAGTC
*
13751928 TAGGCATACGGA-GTTCATTCCCAGTC
1 TAGGCATACGAAGGTT-ATTCCCAGTC
13751954 TA
1 TA
13751956 AGATCGGATC
Statistics
Matches: 24, Mismatches: 3, Indels: 2
0.83 0.10 0.07
Matches are distributed among these distances:
25 3 0.12
26 21 0.88
ACGTcount: A:0.26, C:0.20, G:0.22, T:0.31
Consensus pattern (26 bp):
TAGGCATACGAAGGTTATTCCCAGTC
Found at i:13752792 original size:901 final size:889
Alignment explanation
Indices: 13748337--13753579 Score: 5554
Period size: 901 Copynumber: 5.9 Consensus size: 889
13748327 CTGAGCGTAC
* * * * * *
13748337 GCACGCTCGTTTCATGGGTTGACTTAGGCAT-ATAGAGTTCATTCTCAGTCTAAGCAAACGAAGT
1 GCACGCTCGTTTCGTGGGTTG-CTTAGGCATCA-A-AGTTCATTCCCAATCTAGGCATACGGAGT
* * ***
13748401 TCATTCGCAGTCTAAGATCGGATCGGACAGAGGGTTGCAACAGCACATGCTAGGCTCGGGCATGT
63 TCATTCCCAGTCTAAGATCGGATC-GACCGAGGGTTGCGGTAGCACATGC-AGGCTCGGGCATGT
** * * * * *
13748466 GCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAGAACCTGACAGGC
126 GCTGGTGCCACATTTTTCTTC-TCGGGGCACCATC-TCGGAGGATCGCC--A-AACCTGACCGAC
* *** *
13748531 GGCATTGGGGTTCCGGTAATC-GGGGGGCCGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
186 AGCATTGGGGTTCCGACGATCGGGGGGGCC-AGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
* * *
13748595 TGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAA
250 TGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCACACCCCCTTAA
* * *
13748660 AGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGAGGACACTT
315 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * *
13748725 TTTTCAAATGGTCACAAAATCTTGAACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCTTGCGAA
380 TTTTCAAATGGTCACAAAATCTTGTACACTT--A-TTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * * * *
13748790 CAAAAATACAAGGATCACGTCTACCAACTTTGGGTCCAAAACTCCTTCTGAAAGAATTTTAAAAA
442 CAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* ** *
13748855 ATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
507 ATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* *
13748920 TTCACGTGAAGGCTTAAGAGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTA
572 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
* * *
13748985 GAAATATGAAGATGTACCTAAATCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGTCT
637 GAAATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CCGTCT
* ** * * *
13749050 CTCTGGCCGACATAGTGCCCGCAAGCCCGCCTGC-CCACTCTTTTCATCGGTTGGCTTAGGCATA
701 CTCTGGCCGACGTAGTGCCCGCCCGCCCGCC--CACCGCTCGTTTCGTCGGTTGGCTTAGGCATA
* * * * * * * *
13749114 CGGAGTTCATTCCCAGTCTATGATTGGACCGGACCGAGGGTTACGGTAGCAGGA-TCGGTAGCAC
764 TGGAGTTCATTCCCAGTCTAAGATCGGA-CGAATCGAGGGTTGCGGTAGCAAGATTC-GCAGCAC
* * * * * * *
13749178 GCAGAGGGGGACCCGGCCGATCCC-CAACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
827 GCAAAGGGGGACCCGACCGA-CCCTCGACTTACGCATCCCCCCCCTCTGGCCGACTGAGCGCCT
* * ** * * *
13749241 GCACGCTCATTTCATGGGTTGACTTAGGCATACGGAG-TCATTCCCAGTCTAAGCATATGGAGTT
1 GCACGCTCGTTTCGTGGGTTG-CTTAGGCAT-CAAAGTTCATTCCCAATCTAGGCATACGGAGTT
* * * * * *
13749305 CAATCCCAGTCTAAGATCGAACCGGACCGAGGGTTGCGGCAGCAAATGCTGGGCTCGGGCATGTG
64 CATTCCCAGTCTAAGATCGGATC-GACCGAGGGTTGCGGTAGCACATGC-AGGCTCGGGCATGTG
* * * **
13749370 CTGGT-ACAGCATTTTTCTTCGTCGGGGCACCATCGCAGGAGCATCGTTGGAGAACCTGACCGAC
127 CTGGTGCCA-CATTTTTCTTC-TCGGGGCACCATCTC-GGAGGATCG--CCA-AACCTGACCGAC
* * * * ** * *
13749434 GGCATTGGGGTTTCGCCGATCGGGGGGGCC-GAGGGGTACGCACACATGATATGCGATGGGTGCT
186 AGCATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
** * *
13749498 CATACTTGGCCCTTATATTGGCCCCCTATCCCTCACCAAACCTCGAGAACTCACA-CCCCTTAAA
251 GGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* ** *
13749562 GAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCAAAAATGAGGACACTTT
316 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
13749627 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-A-TTCTTTGTGCATGCCAA-
381 TTTCAAATGGTCACAAAATCTTGTACACTT--A-TTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * *
13749689 AAAAATACAAGGATCA-ATCTACCAAGTTAGGGGCCAAAACTCCTT-CGAAAAAAATTTAAAAAA
443 AAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* * * *
13749752 TCTCGAACCAGTAAAAAGTTTC-AAAATCGT-AAAAATAGAAAACGAGTCGTCTTG-CATGAAAT
508 TCCCAAACC-GTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* *
13749814 TTCACGTGAAGGCTTAAGGGACGCATTGTATGAATTTACAAGCCACAAAAATGGCGTTGGCCA--
572 TTCACGTGAAGGCTTAAGGGAC-CATTGTATGAATTTACAAGCCATAAAAATGGCATTGG-CATG
*
13749877 CAGAAATATTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
635 CAGAAATA-TGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CCG
* * * * *
13749942 CCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG---TCTGCTTGTTTCGTCGGTTGGCTTAGGCAA
698 TCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACCGCTCGTTTCGTCGGTTGGCTTAGGCAT
* * * * * * * *
13750004 ACGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCAGGA-TCTGCAGCA
763 ATGGAGTTCATTCCCAGTCTAAGATCGGA-CGAATCGAGGGTTGCGGTAGCAAGATTC-GCAGCA
* * ** * * * * ** *
13750068 CGCAGATGGGGACTTGGCCGATCCC-CGACTTGCGCATCCCACCCCTCTGGCAGGTTGAGCGCCC
826 CGCAAAGGGGGACCCGACCGA-CCCTCGACTTACGCATCCCCCCCCTCTGGCCGACTGAGCGCCT
*
13750132 GTACGCTCGTTTCGT-GG--G--T-----T----G---A----C--T-TAGGCATACGGAGTTCA
1 GCACGCTCGTTTCGTGGGTTGCTTAGGCATCAAAGTTCATTCCCAATCTAGGCATACGGAGTTCA
* * * * * *
13750173 TTCCTAATCTAAGATCAGACCAGACCGAGGGTTGCGGTAGCACAAT-TATTAGCTCGGGCATGTG
66 TTCCCAGTCTAAGATCGGATC-GACCGAGGGTTGCGGTAGCAC-ATGCA--GGCTCGGGCATGTG
* * * * * *
13750237 CTGGTGCCATATTTTTCTTCATCGCGGCACCATCATCGGAGCATCGCTGGAGAACCTGACCGGCG
127 CTGGTGCCACATTTTTCTTC-TCGGGGCACCATC-TCGGAGGATCGC--CA-AACCTGACCGACA
* *
13750302 GCATTGGGGTTCCGACGATC-GAGGGGCC-GAGGGGGTGTGCGCACATGATGTGC-AGTGGTTGC
187 GCATTGGGGTTCCGACGATCGGGGGGGCCAG-GGGGGTGTGCGCACATGATGTGCGA-TGGGTGC
* * * * * *
13750364 TGGTACTTGGCCCCTATATTGGGCCTCTATCCCTGATCAAACCTCAAGAACT-AGCACCCCCTTA
250 TGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCA-CACCCCCTTA
* * * *
13750428 AATAGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCCATTAAAATGTCTGAAATGGGGACACT
314 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* * *
13750493 TTTTTCAAATGCTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTGTTTTGTGCATGCTA
379 TTTTTCAAATGGTCACAAAATCTTGTACACTT--A-TTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * * *
13750558 ACAAAAATACAAGGATCACGTTTACCAAGTTTGGGGCCAAAAATCATTCCAAAAAAATTTTAAAA
441 ACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * * * *
13750623 AATCTCGAACCGTAAAGAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
506 AATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * * **
13750688 CTTGACATGAAGGATTAAGGGACCATTGTATGAATTTACAAGTGATAAAAATGGCATTGGCATGC
571 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * * *
13750753 AGAAATATGAAGATGTGCCTAAAACCACCTACCA-CCTATCGATCCATGGCTTACGCATCCTGTC
636 AGAAATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC-GTC
* * * * * *
13750817 TCTCTGGCCGACATAGT----GCCTGCCCG--C-CCGCTCATTTCCTCGGTTGGCTTAGGTATAC
700 TCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACCGCTCGTTTCGTCGGTTGGCTTAGGCATAT
* ** *
13750875 GGAGTTCATTCCCAGTCTAAGATCAGATCAGAAT-GAGGGTTGCGACAGCAGGA-TCGGCAGCAC
765 GGAGTTCATTCCCAGTCTAAGATCGGA-C-GAATCGAGGGTTGCGGTAGCAAGATTC-GCAGCAC
* * * ** ** *
13750938 GCAGAGGGGGACCCGATCGATCCC-CGGCTTGTGCATCCTACCCCTCTGGCCGACTGAGCGCCC
827 GCAAAGGGGGACCCGACCGA-CCCTCGACTTACGCATCCCCCCCCTCTGGCCGACTGAGCGCCT
13751001 GCACGCTCGTTTCGT-GG--G--T-----T----G---A----C--T-TAGGCATACGGAGTTCA
1 GCACGCTCGTTTCGTGGGTTGCTTAGGCATCAAAGTTCATTCCCAATCTAGGCATACGGAGTTCA
* * * * *
13751042 TTCCCAGTCTAAGATCAGATTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGGATGTGCT
66 TTCCCAGTCTAAGATCGGA-TCGACCGAGGGTTGCGGTAGCACATGC-AGGCTCGGGCATGTGCT
* * *
13751107 GGTGCCACATTTTTCTTCATCGGGGCACCATCATCGGAGCATCACCGGAGAACCTGACCGACGGC
129 GGTGCCACATTTTTCTTC-TCGGGGCACCATC-TCGGAGGATCGCC--A-AACCTGACCGACAGC
* * * *
13751172 ATTGGGGTTCCGGCAATCGGGTGGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGGCTGCTGG
189 ATTGGGGTTCCGACGATCGGGGGGGCC-AGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGG
* *
13751237 TACTTGGCACTTATATTGGCCCCCTATCGCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
253 TACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
13751302 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
318 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
13751367 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAA
383 TCAAATGGTCACAAAATCTTGTACACTT--A-TTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
* *
13751432 AAGTACAAGGATCATGTCTACCAAGTTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAT
445 AAATACAAGGATCATGTCTACCAAG-TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * * **
13751497 CCCGAATCGTAAAAATTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
509 CCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* *
13751562 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAAA
574 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
* * * * *
13751627 AATATGTAGATGTCCCCAAACACACCTACCACCCTATCGATCCACGACTTGCGC--CCGTTTCTC
639 AATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCGTCTCTC
* * * * * * *
13751690 TGGCCGACGTAGTGCCTGTCCTCCCGCCCGCCCGCTCGTTTCGTTGGTTGGCTTAGGCATACGGT
704 TGGCCGACGTAGTGCCCGCCCGCCCGCCC-ACCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGA
* * * * *
13751755 GTTCATTCCCAGTCTAAGATCGAACTGAA-CTGAGGGTTGTGGTAGCAGGATTGGCAGCATGCAA
768 GTTCATTCCCAGTCTAAGATCGGAC-GAATC-GAGGGTTGCGGTAGCAAGATTCGCAGCACGCAA
* **
13751819 AGGGGGACCCGACCGACCCTCGACTTACGCATCCCGCCCCTCTGGCCGGTTGAGCGCCT
831 AGGGGGACCCGACCGACCCTCGACTTACGCATCCCCCCCCTCTGGCCGACTGAGCGCCT
* * * *
13751878 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGGTT-ATTTCTAGTCTAGGCATACGGAGT
1 GCACGCTCGTTTCGTGGGTTG-CTTAGGCAT-C-AAAGTTCATTCCCAATCTAGGCATACGGAGT
* *
13751942 TCATTCCCAGTCTAAGATCGGATCGATCCAAGGGTTGCGGTAGCACATGCAAGGCTCGGGCATGC
63 TCATTCCCAGTCTAAGATCGGATCGA-CCGAGGGTTGCGGTAGCACATGC-AGGCTCGGGCATGT
*
13752007 GCTGGTGCCATATTTTTCTTCGTCGGGGCACCATCGTCGGAGGATCGCCAAATAACCTGACCGAC
126 GCTGGTGCCACATTTTTCTTC-TCGGGGCACCATC-TCGGAGGATCGCC--A-AACCTGACCGAC
* *
13752072 AACATT-GGGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCTCACATGATGTGCGATGGGTGCT
186 AGCATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
*
13752136 GGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAGCCTCGAGAACTCACACCCCCTTAAA
251 GGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* *
13752201 AAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTT
316 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* *
13752266 TTTCAAATGCTCACAAAATCTTGTACAC-T-TTTTT-CCTGAATTTTTTTGTGCATGCCAACAAA
381 TTTCAAATGGTCACAAAATCTTGTACACTTATTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
* * * * *
13752328 AATAAAAGGATCACGTCCACCATGTTTGGGGCCAAAACTCCATT-CGAAAAAATTTTAAAGAATC
446 AATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCGAAAAAATTTTAAAAAATC
* ** * *
13752392 CCAAAGCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTT
510 CCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* * * *
13752457 ACGTGAAGGCTTAAGGTATCATTGTATGAATTTACAAGCCATAAAAATGGCATTGCCATACAGAA
575 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
* *
13752522 ATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCTACGGCTTGCGCATCCTGCCTCTC
640 ATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC-GTCTCTC
* * * *
13752587 TGGCTGGCGTAGTGCCCACCCGCCCGCCCACCTGCTCGTTTCGTCGGTTGGCTTAGGCATATGAA
704 TGGCCGACGTAGTGCCCGCCCGCCCGCCCACC-GCTCGTTTCGTCGGTTGGCTTAGGCATATGGA
*
13752652 GTTCATTCCCCAGTCT-AGATTGGAC-AATCGAGGGTTGCGGTAGCAAAGA-TCGCAAGCCCACG
768 GTTCATT-CCCAGTCTAAGATCGGACGAATCGAGGGTTGCGGTAGC-AAGATTCGC-AG--CACG
* * * **
13752714 CAGAGGGGGACCCTGACCGCTCCCTGGGGTTACGCATCCCTACCCCCTCTGGCCGACTGAGCAG-
828 CAAAGGGGGACCC-GACCG-ACCCTCGACTTACGCATCCC--CCCCCTCTGGCCGACTGAGC-GC
13752778 CT
888 CT
* * *
13752780 GTACGC-CGTTTCGTGGGTTGCTTAGGCATCAAAGTTCATTCCCAATCTAAGCAAACGG-GTTCA
1 GCACGCTCGTTTCGTGGGTTGCTTAGGCATCAAAGTTCATTCCCAATCTAGGCATACGGAGTTCA
* ** * * ** * * *
13752843 TTTCCACGTCTTGGATCGGACCAGACTGAGGGTTGATGTAGCCCATGCTGGCCTCGGGCATATGC
66 TTCCCA-GTCTAAGATCGGATC-GACCGAGGGTTGCGGTAGCACATGCAGG-CTCGGGCATGTGC
** *
13752908 TGGTGCCACACATTT-TTCT----TCA-C--C-C---GGA--G--AAACCTGACCGACAGCATTG
128 TGGTGCCACATTTTTCTTCTCGGGGCACCATCTCGGAGGATCGCCAAACCTGACCGACAGCATTG
* ** * * *
13752957 GGGTTCCTGACGATAGACAGGGGTC-GGGGGGTGGGTGCGCACGTGATGTGGCGATGGGTGCTTG
193 GGGTTCC-GACGATCG-GGGGGGCCAGGGGGGT--GTGCGCACATGATGT-GCGATGGGTGCTGG
* * *
13753021 AACTTGGCCCTTAATATTGGCCCCCTTATCCCTCATCAAACCTCGAG-ACTTACACCCCCTTAAA
253 TACTTGGCCCTT-ATATTGGCCCCC-TATCACTCATCAAACCTCGAGAACTCACACCCCCTTAAA
*
13753085 GAGCATTTGAGATTCTAACAGGTTGTGGCTGCCAGTCAGCCATTAAAGTGTCTGAAATGGGGACA
316 GAGCATTTGAGATT-TTACAGGTT-T-GCTGCCAGT-AGCCATTAAAGTGTCTGAAATGGGGACA
* * *
13753150 TTTTTTTCAAATGGTCGCAAAATCTTGCACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGC
377 CTTTTTTCAAATGGTCACAAAATCTTGTACACTT--A-TTTTTAGCTGAATTTTTTTGTGCATGC
** *
13753215 C-ACAAAAATACAAGGATCATGTCTACCAAGTTTAAGGCCAAAACAT-CTTCCGAAAAACTTTTA
439 CAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAC-TCCTTCCGAAAAAATTTTA
** * *
13753278 AAAAATCTTAAACCGTAAAAAGTTTCAAAAATCATGAGAAATAGAAAATGAGTCGTCTTGCCATG
503 AAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
*
13753343 AAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
568 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * * *
13753408 TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTACGGATCCC
633 TGCAGAAATATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CC
* * * *
13753473 GTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG---TCCGCTTGTTTTGTCAGTTGGCTTAGGCA
697 GTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACCGCTCGTTTCGTCGGTTGGCTTAGGCA
*
13753535 TATGGAGTTCATTCCCAGTCTAAGATCGGATCGGATCGAGGGTTG
762 TATGGAGTTCATTCCCAGTCTAAGATCGGA-CGAATCGAGGGTTG
13753580 TGGCAGCACA
Statistics
Matches: 3760, Mismatches: 448, Indels: 275
0.84 0.10 0.06
Matches are distributed among these distances:
866 60 0.02
867 155 0.04
868 201 0.05
869 241 0.06
870 249 0.07
871 199 0.05
872 56 0.01
873 82 0.02
874 83 0.02
875 36 0.01
876 7 0.00
877 137 0.04
878 20 0.01
879 8 0.00
880 16 0.00
881 5 0.00
882 13 0.00
883 26 0.01
884 41 0.01
885 31 0.01
886 1 0.00
887 9 0.00
888 66 0.02
889 43 0.01
890 6 0.00
891 158 0.04
892 3 0.00
893 258 0.07
894 258 0.07
895 206 0.05
896 48 0.01
897 106 0.03
898 59 0.02
899 89 0.02
900 29 0.01
901 312 0.08
902 129 0.03
903 274 0.07
904 40 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (889 bp):
GCACGCTCGTTTCGTGGGTTGCTTAGGCATCAAAGTTCATTCCCAATCTAGGCATACGGAGTTCA
TTCCCAGTCTAAGATCGGATCGACCGAGGGTTGCGGTAGCACATGCAGGCTCGGGCATGTGCTGG
TGCCACATTTTTCTTCTCGGGGCACCATCTCGGAGGATCGCCAAACCTGACCGACAGCATTGGGG
TTCCGACGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGC
CCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
TCACAAAATCTTGTACACTTATTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGA
TCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGTAA
AAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATG
TCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCGTCTCTCTGGCCGACGTAG
TGCCCGCCCGCCCGCCCACCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGT
CTAAGATCGGACGAATCGAGGGTTGCGGTAGCAAGATTCGCAGCACGCAAAGGGGGACCCGACCG
ACCCTCGACTTACGCATCCCCCCCCTCTGGCCGACTGAGCGCCT
Found at i:13753900 original size:713 final size:712
Alignment explanation
Indices: 13752931--13755001 Score: 3061
Period size: 713 Copynumber: 2.9 Consensus size: 712
13752921 TTTTCTTCAC
* * * * ** *
13752931 CCGGAGAAACCTGACCGACAGCATTGGGGTTCCTGACGATAGACAGGGGTCGGGGGGTGGGTGCG
1 CCGGAG-AACCTGACCGGCGGCATTGGGGTTCC-GACAATCG-GGGGGGCCGGGGGGT--GTGCG
* * *
13752996 CACGTGATGTGGCGATGGGTGCTTGAACTTGGCCCTTAATATTGGCCCCCTTATCCCTCATCAAA
61 CACATGATGT-GCGATGGGTGCTGGTACTTGGCCCTT-ATATTGGCCCCC-TATCCCTCATCAAA
* * *
13753061 CCTCGAG-ACTTACACCCCCTTAAAGAGCATTTGAGATTCTAACAGGTTGTGGCTGCCAGTCAGC
123 CCTCGAGAACTCAAACCCCCTTAAAGAGCATTTGAGATTAT-ACAGGTT-T-GCTGCCAGT-AGC
* *
13753125 CATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCGCAAAATCTTGCACACTTCAAGTT
184 CATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTT
* **
13753190 TTTAGCTGAATTTTTTTGTGCATGCC-ACAAAAATACAAGGATCATGTCTACCAAGTTTAAGGCC
249 TTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
* ** * *
13753254 AAAACAT-CTTCCGAAAAACTTTTAAAAAATCTTAAACCGTAAAAAGTTTCAAAAATCATGAGAA
314 AAAAC-TCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCTTGAAAA
*
13753318 ATAGAAAATGAGTCGTCTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
378 ATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
13753383 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
443 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
*
13753448 TATCGATCCATGGCTTACGGATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCTT
508 TATCGATCCATGGCTTACGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCTT
* * *
13753513 GTTTTGTCAGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCGGATCGGATCGAGGGT
573 GTTTTGTC-GTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCGGACCGGATCGAGGGT
*
13753578 TGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACTATC
637 TGTGGCAGCACATGCT-GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATC
*
13753643 ACCGGAGCATCG
701 ACCGGAGCATCA
* *
13753655 CCGGAGAACCTAACCGGCGGCATTGGGGTTCCGACAATCGGGGGGGCCGGGGGGTGTGTGCACAT
1 CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACAATCGGGGGGGCCGGGGGGTGTGCGCACAT
* *
13753720 GATGTGCGATGGGTGCTGGTACTTGGCCCATACATTGGCCCCCTATCCCTCATCAAACCTCGAGA
66 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
*
13753785 ACTCAAACCCCCTTAAAGAGCAATTGAGATTATACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
131 ACTCAAACCCCCTTAAAGAGCATTTGAGATTATACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
*
13753850 TGAAATGGGGACATTTTTTTCAAATAGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAA-T
196 TGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATT
* * * * *
13753914 TTTTTGTGCATGCCAACAAAAATACAAGGATGACATCTACCCAGTTTGGGGCCACAACTCCTTCT
261 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
*
13753979 GAAAAAATTTTAAAAAATCTCGAATCGTAAAAAGTTTCAAAAATCTTGAAAAATAGAAAATGAGT
326 GAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCTTGAAAAATAGAAAATGAGT
* *
13754044 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTCACATGCCATAAAA
391 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
13754109 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGG
456 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGG
*
13754174 CTTACGCATCCCGTCTCTCTGGCC-ACCGTAGTGCCCGCCCGCCCGTCCGCTTATTTTGTCGATT
521 CTTACGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGTCCGCTTGTTTTGTCG-TT
* * * * * ** *
13754238 GGCATAGGCATACGGAGTTCATTCCCAATCTAACATCGGACCGAATCAAGTGTTGCAGCAGTACA
584 GGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCGGACCGGATCGAGGGTTGTGGCAGCACA
* * * **
13754303 TGCTGGTTCGGGCATGTGCTGGTGCTGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCA
649 TGCTGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGAGCATCA
*
13754367 CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACATATCGGGGGGGCTGGGGGGTGTGCGCACA
1 CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACA-ATCGGGGGGGCCGGGGGGTGTGCGCACA
* * *
13754432 TGATGTGTGATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCTAG
65 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
* *
13754497 AACTCAAACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAGTAGCCATTAAAGTGT
130 AACTCAAACCCCCTTAAAGAGCATTTGAGATTATACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* * *
13754562 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCTGAAT
195 CTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAAT
* *
13754627 TTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTGCCAAGTTTGGGGCCAAAACTCCTTC
260 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * * **
13754692 CGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAGAATCTTGAAAAACAGAAAACAAG
325 CGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCTTGAAAAATAGAAAATGAG
*
13754757 TCGTCTTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
390 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* ** * *
13754822 AATGGAATTGGCACACAAAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCATG
455 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATG
* * * * * * *
13754887 GCTTGCGCATCCTGCCTCTTTGGCCGGCATAGT----GCCCG--C--CCGCTTGTTTCGTCGGTT
520 GCTTACGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCTTGTTTTGTC-GTT
* * *
13754944 GGCTTAGGCATACGAAGTTCATTCCCAATATAAGATCGGACCGGATAGAGGGTTGTGG
584 GGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCGGACCGGATCGAGGGTTGTGG
13755002 AAACAAGATC
Statistics
Matches: 1225, Mismatches: 113, Indels: 36
0.89 0.08 0.03
Matches are distributed among these distances:
706 62 0.05
707 1 0.00
708 1 0.00
710 5 0.00
712 106 0.09
713 625 0.51
714 273 0.22
715 1 0.00
716 28 0.02
717 40 0.03
718 23 0.02
719 13 0.01
721 12 0.01
722 6 0.00
723 23 0.02
724 6 0.00
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (712 bp):
CCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACAATCGGGGGGGCCGGGGGGTGTGCGCACAT
GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
ACTCAAACCCCCTTAAAGAGCATTTGAGATTATACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
TGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATT
TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
GAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCTTGAAAAATAGAAAATGAGT
CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGG
CTTACGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCTTGTTTTGTCGTTGG
CTTAGGCATACGGAGTTCATTCCCAATCTAAGATCGGACCGGATCGAGGGTTGTGGCAGCACATG
CTGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGAGCATCA
Found at i:13756961 original size:70 final size:70
Alignment explanation
Indices: 13756873--13757004 Score: 230
Period size: 70 Copynumber: 1.9 Consensus size: 70
13756863 AGATCGGATT
*
13756873 GGACCGAGGGTTGTGGCAGCACATGCTGGGCTTGGGCATGTGCTGG-TAGAGCATTTTTCTTCGC
1 GGACCGAGGGTTGTGGCAGCACATGCTGGGCTTGGGCAAGTGCTGGTTAG-GCATTTTTCTTCGC
13756937 CCAACC
65 CCAACC
*
13756943 GGACCGAGGGTTGTGGCAGCACATGCTGGGCTTGGGCAAGTGCTGGTTCGGCATTTTTCTTC
1 GGACCGAGGGTTGTGGCAGCACATGCTGGGCTTGGGCAAGTGCTGGTTAGGCATTTTTCTTC
13757005 ATCGGGGCAC
Statistics
Matches: 59, Mismatches: 2, Indels: 2
0.94 0.03 0.03
Matches are distributed among these distances:
70 57 0.97
71 2 0.03
ACGTcount: A:0.14, C:0.23, G:0.36, T:0.27
Consensus pattern (70 bp):
GGACCGAGGGTTGTGGCAGCACATGCTGGGCTTGGGCAAGTGCTGGTTAGGCATTTTTCTTCGCC
CAACC
Found at i:13758708 original size:26 final size:26
Alignment explanation
Indices: 13758679--13758731 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13758669 GTTGACTTAG
* *
13758679 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGCAGTTCATTCCCAGTCTAA
13758705 GCATACGCAGTTCATTCCCAGTCTAA
1 GCATACGCAGTTCATTCCCAGTCTAA
13758731 G
1 G
13758732 ATCAGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGCAGTTCATTCCCAGTCTAA
Found at i:13759018 original size:894 final size:894
Alignment explanation
Indices: 13756943--13769293 Score: 15068
Period size: 894 Copynumber: 13.8 Consensus size: 894
13756933 TCGCCCAACC
* * * * *
13756943 GGACCGAGGGTTGTGGCAGCACATGCTGGGCTTGGGCAAGTGCTGGTTCGGCATTTTTCTTCATC
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * *
13757008 GGGGCACCATCGCCGGAGCATCGTCGGAGAACCTAACCTG-CGGCATT-GGGTTCCAACGATCGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC-GACGGCATTGGGGTTCCGACGATCGG
* *
13757071 GGGGGCCGGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTATTTGGCCCTTATATTGGCC
130 GGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* *
13757136 CTCTATCCCTCATC-AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGTTT
194 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
* * *
13757200 TGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTA
259 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
*
13757265 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTAC
324 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* * * *
13757330 CAAGTTTGGGGCCAAAACTTCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTTCA
389 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGA
* * * *
13757395 AAATCGTGAAAAATAGAAAATGAGTCATCTTGCCATTAAACTTCACGTGAAGGCTTAAGGGACCA
454 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
* *
13757460 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCAAAACC
519 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACC
* * *
13757525 CACCTACCACCCTATTGATGCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCC
584 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCC
* * * *
13757590 GTCCACCTGCCCGCTCGTTTCATCGATTGGCTTAGGCCAGACAGAGTTCATTCCCAGTCTAAGAT
645 G--C-CC-GCCCGCTCGTTTCGTCGGTTGGCTTAGG-CATACGGAGTTCATTCCCAGTCTAAGAT
* * * * *** **
13757655 CAGACCAGACTGAGGGTTGCAGCAGCAGGATCGACAGCACGCAGAGGGGGATTGGGTCGATCCCC
705 CAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-GGGGACCCGACCGATCCCC
* * * * * *
13757720 GACTTGCGCATCCAGCCCCTCTGGCCGACTGAGCGCCCGTACACTCGTTTCGTGGGTTAACTTAG
769 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
* * *
13757785 ACATGCGGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC-GAACT
834 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACT
* * * *
13757846 AGACCGTGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCTGCATTTTTCTTCATC
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * * *
13757911 GGGGCACCATCGTCGGAGCATTGCCGGAGAACCTGACCGACGACATTAGGGTTCC-ATCGATCGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGA-CGATCGG
* * *
13757975 GGGGGCCGAGGGGTTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCGCTTATATTAGCC
130 GGGGGCCG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
** *
13758040 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCATTTAAAGAGCATTTGAGATTTTATAGGTT
194 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
* *
13758105 TGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCGAATGGTCACAAAATCTTG
259 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
*
13758170 TACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTAC
324 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* * * * ** *
13758235 CAATTTTGGGGCCAAAACTCTTTCTGAAAAAATTTTAAAAAATCTCAAACCATAAAAAGTTTTAA
389 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGA
* * * * * *
13758300 AAATCGTGACAACTAGAAAACGAGCCGTCCTGCCATGAAACTTCACGTGAAGGCTTAAGGGACAA
454 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
13758365 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACC
519 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACC
* * * * *
13758430 CACCTACCACCCTATCGATACACGGCTTTCGCATCCCGTTTATC-GGCCAGCGTAGTGCCCGCCC
584 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC
* * * **
13758494 GCCTGCTCGTTTC-TCCGGTTGGCTTATGCATACGGAGTTCATTCCCAGTCTAAGATCAAATTGG
649 GCCCGCTCGTTTCGT-CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGG
* * * *
13758558 ACCGAGGGTTGCGGTAGTAGGATTGGCAGCACGCAGAGGGGACCCGACCGATCCCCGGCTTGCAC
713 ACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGACCCGACCGATCCCCGGCTTGCGC
* * * *
13758623 ATCCCGCCCCTCTGGCTGGCTGAGTGCCCGTACGCTCGTTTCATGGGTTGACTTAGGCATACGGA
778 ATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA
* *
13758688 GTTTATTCCCAGTCTAAGCATACGCAGTTCATTCCCAGTCTAAGATCAGACT
843 GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * ***
13758740 GGACCGAGGGTTGTGGTAGCACATACTGGGCTCAAACATGTGCTGGTGCCGCATTTTTCTTCATC
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * * *
13758805 GGGGCACCATTGTCGGAGCATCATCGGACAACCTGACCGACGGCATTGGGGTTCCGACGATCAGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
13758870 GGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
131 GGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
** *
13758935 CCTATCCCTCATCAAACCTCGAGAACTCACACCCATTTAAAGAGCATTTGAGATTTTATAGGTTT
195 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
* *
13759000 GCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCGAATGGTCACAAAATCTTGT
260 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* *
13759065 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGTATCGCGTCTACC
325 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
* *
13759130 AAGTTTGGGGCTAAAACACCTTCCGAAAAAATTTTAAAAAAATC-CTGAACCGCAAAAAGTTTTG
390 AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTT-AAAAAATCTC-GAACCGCAAAAAGTTTTG
* * *
13759194 AAAATCGTGACAAATAGAAAACGAG-CTGTCCTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
453 AAAATCATGAAAAATAGAAAACGAGTC-GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
* *
13759258 CATTGTATGAATTTACAAGACATAAAAATGGCATTGGCACATAGAAATATGAAGATGTTCCTAAA
517 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAA
* *
13759323 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTATCTGGCCGACGTAGTGCCCGC
582 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GC
*
13759388 CCGCCCGCCTGCCCGCTCGTTTCTTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
643 CCG--C-CC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
** * * * * * * *
13759453 TC-GAATTGGACTGAGGGTTGCGGTAGTAGGATCGACAACACGCAGAGGGGACCCGACCAATCCT
704 TCAG-ACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGACCCGACCGATCCC
* * * * *
13759517 CAGATTGCGCATCCCGCCCCTCTAGCCAGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTA
768 CGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTA
* *
13759582 GGCATACGGAGTTCATTCCCAGTCTAAGCATATGCAGTTCATTCCCAGTCTAAGATCAGACT
833 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * * *
13759644 GGATCGAGGGTTGCGGCAGCACATACTGGGCTCGAGCATCTGCTGGTGCCG--TATTT-TTC-T-
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * *
13759704 ---------TCGTCGGAGCATCGCCCGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
*
13759760 GGGGCCAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
131 GGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
** *
13759825 CCTATCCCTCATCAAACCTCGAGAACTCACACCCATTTAAAGGGCATTTGAGATTTTACAGGTTT
195 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
*
13759890 GCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
260 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* * *
13759955 ACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGAATCATGTCTACC
325 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
* *
13760020 AAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAA
390 AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAA
* * * * *
13760085 AATCATGACAAATAGAAAATGAGCCGTCCTGCCGTGAAACTTCACGTGAAGGCTTAAGGGACCAT
455 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
* * ** *
13760150 TCTATGAATTTACAAGCCATAAAAATGGCATTGGGATGTAGAAATATGAATATGTGCCTAAACCC
520 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCC
*
13760215 ACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG
585 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----G--C-
* * **
13760280 CCTGCCCGCCCGCTTGTTTCGTCGGTTGGCTTAGGCATACTGAGTTCATTCCCAGTCTAAGATTG
643 CC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
** * * * *
13760345 GATAGGACTGAGGGTTGTGGCAGCAGGATCGGCAGCACGTAGAGGGAGACCC-AGTCGATCCCCG
707 GACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGG-GACCCGA-CCGATCCCCG
* *
13760409 GCTTGCGCATCCCGCCCCTCTGGCCAGCTGAGCGCCCACACGCTCGTTTCGTGGGTTGACTTAGG
770 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGG
** * * * ** *
13760474 CATACAAAGTTCATTACCAGTCTAAGCATAAGGAGTTCATTTCCAGTCTAAGATTGGACC
835 CATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * ** * *
13760534 GGACCAAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGGTAACGCATTTTTCATCGTC
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
** ** *
13760599 GGGGCACCA-C--C---G---C--CGGAGAACCTGATTGGTGGCATTAGGGTTCCGACGATC-GG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
* * *
13760652 GGGACCGGGGGGTGTGTGCACATGATGTGGGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
131 GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* * *
13760717 CTATCTCTCATCAAACCTTGAGAACTCACACCCCCTTAATGAGCATTTGAGATTTTACAGGTTTG
196 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
13760782 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
261 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * * ** **
13760847 CACTTCGTGTTTTAAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAAAATCACGTCTAAAA
326 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCA
* * **
13760912 AGTTTGGGGCCAAAACTCCTTCCGAAAAAGTTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAA
391 AGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAA
*
13760977 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATT
456 ATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATT
*** *
13761042 GTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCA
521 GTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCA
*
13761107 CCTACCACCCTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGC
586 CCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG--C-C
* * *
13761172 CAGCCCGTTCATTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATC-GAACC
648 C-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACC
* * * ** * * * * *
13761236 AGACCGAGGGTTACGACAGCAGGATCAACAGCATGTAGAGGGGGACTCGACCAATCCCCGACTTG
711 GGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-GGGGACCCGACCGATCCCCGGCTTG
* * * *
13761301 CGCATCTCGCCCCTTTGGCCGGCTGAGCGCCCGCATGCTCGTTTTGTGGGTTGACTTAGGCATAC
775 CGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
* * ** *
13761366 GGAGTTCATTGCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATTGGACC
840 GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * ** *
13761421 AGACCGAGGGTGGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCATATTTTTCATCGAT
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-AT
* *
13761486 -GGGGCACCATCGTC---G-A-------AGAACCGGACCGACAGCATTGGGGTTCC-AGCGATCG
65 CGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGA-CGATCG
* * * * *
13761538 GGGTGGCCGGGGGGGTGTGCACACACGATGTGCGATGGCTGCTGGTACTTAGCCCTTATATTGGC
129 GGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
* * *
13761603 CCCCTATCCCTCATCAAACCTCCAGAGCTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGA
193 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
* * *
13761668 TTGCGGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCGAATGGTCACAAAATCTT
258 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
* * ***
13761733 GAACACTTCGAGTTTTTAGCTGAATTGTTTTT-TGCATGCCAAAAAAAATACAAGGATTGTGTCT
323 GTACACTTCGAGTTTTTAGCTGAATT-TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
13761797 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGC-AAAAGCTTT
387 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAG-TTT
* * *
13761861 CGAAAATCATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA
451 TGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * **
13761926 CCACTGTATGAATTTACAAGCCATCAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAA
516 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAA
* * *
13761991 ACCCACCTACCACCCTATCGATCCATGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG
581 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-
* * *
13762056 TCCGCCCGTCCACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCACTCCCACTCTAAG
643 -CCGCCCG----CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
** * * * * * * * * * *
13762121 ATTGGATCAGACTGAAGGTTACGGCAACAGGATTGGCAACACACAGAGGGGGACCCGGCCGATCC
703 ATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-GGGGACCCGACCGATCC
* * * * *
13762186 CCGACTTGCGCATCCCACCCCTTTGGTCGGTTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
767 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
* * *
13762251 AGGCATATGGAGTTCATTCCCAGTCTAAGCATACGAATTTCATTCCCAGTCTAAGATCAGA-T
832 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * * **
13762313 CGGACGGAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTTGT
1 -GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCAT
* * * * * * ** *
13762378 CGGGACACCATTGTCGGAGCATCGCCGGAGAACCTGACTGGCGACATTGGGGTTTTGGCGAT---
65 CGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGG
* *
13762440 ------CGGGGGGTGTGCGCACAGGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
130 GGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
* *
13762499 CCTATCCCTCATCAAACCTCGAGAACACACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
195 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
*
13762564 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAGAATCTTGT
260 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* *
13762629 ACACTTCGAGTTTTTAGCTGACTTTTTTTGTGCATGCCTAA-AAAAATACAAGGATCAGGTCTAC
325 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AACAAAAATACAAGGATCACGTCTAC
* * * * **
13762693 CAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAACTCCCGAACCGAAAAAAGTTTCAA
389 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGA
13762758 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
454 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
*
13762823 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA-A-AAATATGAAGATATGCCTAAA
519 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA--CATAGAAATATGAAGATGTGCCTAAA
* * * **
13762886 CCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCTGTCTCTCTAGCCGATGTAGTGCCCGC
582 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC
* * *
13762951 CCACCCGCTCG-TTCTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGCCTAAGAT-AGGAT
647 CCGCCCGCTCGTTTC-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA-GAC
* * * * * * *
13763014 TGGATCAAGGGTTACGGCAACAGGATCGGCAGCACGCAAAGGGGGACCC-AGCCGATCCCTGGCT
710 CGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-GGGGACCCGA-CCGATCCCCGGCT
*
13763078 TGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCAT
773 TGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCAT
* ** *
13763143 ACAGAGTTCATTCCCAGTCTAAGCATACAAAGTTCATTCCCAGTCTAAGATCAGACC
838 ACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * * * **
13763200 AGACCGAGGGTTACGGAAGCACATACTGGGCTCAGGCATGTGCTGGACCCGCATTTTTCTTCA-C
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * * * * **
13763264 TTGGGCACCATC-ACTGGAGCATCGTCGGAGAACCTGACCGGCAGCATTGGGGTTCTGGTGATCG
66 -GGGGCACCATCGTC-GGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG
* * * *
13763328 GGGGGTCGGGGGGGGTTTGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGC
129 GGGGGGC-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
*
13763393 CCCCTATCCCTCATCAAACCTCTAGAACTCACA-CCCCTTAAAGAGCA-TTGAGATTTTACAGG-
193 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
13763455 TTGCTGCCAGTAGCCATTAAAGTGTTCCTGAAATGGGGACACTTTTTTTCAAAATGGTCACAAAA
258 TTGCTGCCAGTAGCCATTAAAGTG-T-CTGAAATGGGGACAC-TTTTTTC-AAATGGTCAC-AAA
*
13763520 ATCTTGTACAC-TC-AGTTTTTAGCCTGAAGTTTTTTG-GCAATGCCAACAAAAATACAAGGATC
318 ATCTTGTACACTTCGAGTTTTTAG-CTGAATTTTTTTGTGC-ATGCCAACAAAAATACAAGGATC
* *
13763582 ATGTCCTACC-AGTTTGCGGCCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CTGAACCGCA
381 ACGT-CTACCAAGTTTG-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCGC-
13763645 AAAAAGTTTTGAAAATCATG-AAAATAGAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
442 AAAAAGTTTTGAAAATCATGAAAAATAG-AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
*
13763709 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA-AGCAGAAATATGAA
506 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACA-TAGAAATATGAA
13763773 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
570 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGG
13763838 CGTAGTGCCCGCCTACCGCCCGCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT-C
635 CGTAGTGCCCG-C--CCG--C-CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
** * * * * * * *
13763902 CAGTCTAAGATTGGACCGAACTGAGGGTTACAGTAGCAGGTTTGGCAGCACGCAGAGGTGGACCC
694 CAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGG-GGACCC
* * * * * * *
13763967 GACCGATCCCTGGCTTGCGCATCCTGCCCCTCTGGCCTGCTGAGCACCTGCACACTCGTTTTGTG
758 GACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTG
*
13764032 GGTTGACTTAGGCATACGGAGTTCATTCCTAG--T---CA-A---AG---------A-TC--AGA
823 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA
13764076 TC--A--
888 TCAGACT
* * * * *
13764079 -GACCGAGGGTTGCGGCAGCACATGCTGGGCTTGGGCATGTGCTGGTGCCACATTGTTC-TCGTT
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * * * * * * *
13764142 GGGGAACCATCGTCGAAGCATCGTTGGAGAACCTGACCGACGGTATTGGGGATCTGGCGATCAGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
* * * *
13764207 GGGGTC-AGGGGTGTTCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
131 GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
*
13764271 CTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
196 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
*
13764336 CTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
261 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
*
13764401 CACTTCGAGTTTTTTAGCTGAA-TTTTTTGTGCCATGCCAACAAAAATACAAGGATCACATCTAC
326 CACTTCGAG-TTTTTAGCTGAATTTTTTTGTG-CATGCCAACAAAAATACAAGGATCACGTCTAC
* * *
13764465 CAAGTTTGGGGCCAAAACTCC-TCCGAAAAAA-TTTGAAAAGTCTTTGAACCCGCAAAAAGTTTT
389 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-TCGAA-CCGCAAAAAGTTTT
* * *
13764528 GAAAATCATTG-AAAATAGAGAATGAGTCGTCCTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
452 GAAAATCA-TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
13764592 CCATTGTATGAATTTACAAGCCAT-AAAATGGCATT-GC-CATGCAGAAATATGAA-ATGTGCCT
516 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAT--AGAAATATGAAGATGTGCCT
* * *
13764653 AAACCCACCTACCACCGTATCGATCCAACGGGCTTGCG-ATCCCGTCTC-CTGGCC-ACGTAGTC
579 AAACCCACCTACCACCCTATCGATCC-AC-GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * * ** * *
13764715 CCTATCGATCACGGCTTGCGCATCATGTCTCTTGGTCGACGTAGTGCCCGC-CCGCCCGCCCGTC
642 CC---CG--C-CCGC--CCGC-TC--G--T-TTCGTCG--GT--TG---GCTTAG---G--CATA
** ** * * ** * *
13764779 CTGCTCGTTTCATCGATTGCTTAGGCATACGGAGTTCATTCCAGTCTAGATCG-GACTGGATCGA
681 C-G---GAGT--TC-ATT-CCCAGTC-TA---AG---A-T-CAGACCGGACCGAG---GG-T--T
* * * * *
13764843 GGGTTGCAGAACAGGATCGGCAGCAC-TAGGGGCGGACCCGACCGATCCTCGGCTTACGCATCCC
723 GCG--GCAG--CAGGATCGGCAGCACGCAGAGG-GGACCCGACCGATCCCCGGCTTGCGCATCCC
* * * * * *
13764907 GCCCTTCTAGCTGGCTAAGCAG-CCGCATGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTT
783 GCCCCTCTGGCCGGCTGAGC-GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
* * *
13764971 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACC
847 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * * * *** *
13765019 GCACCAAGGGTTGTGGTATCACATGCTGGGCTAAAGCATGTGCTGGTGCCGCATTTTTCTTCACC
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
** *** * * * * *
13765084 GGGGCACCATCACCGGAGCATTACCGAAAGAA-CTAACCGGCGGCATTGGGGTTTCGACGAT-TG
66 GGGGCACCATCGTCGGAGCATCGTCG-GAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGG
*
13765147 GGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCC
130 GGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
* * *
13765212 CCTATCCCTCATCAAAACTCAAGAACT--CACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTT
195 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
* *
13765275 GCTGCCAGTAGCCATGAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
260 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* * * *
13765340 ACACTTTGAGTTCTTGGCTGAATTTTTTTTGTGCATGCCAACAAAAATACAAGCATCACGTCTAC
325 ACACTTCGAGTTTTTAGCTGAA-TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* * * * **
13765405 CAAGTTTGGGTCCAAAACTCCATCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAA
389 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGA
*
13765470 AAATCATGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
454 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
* **
13765535 TTGTCTGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACC
519 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACC
*
13765600 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGGCGTAGTGCCCGCCT
584 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-
*
13765665 GCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC-GAGTTCATTCCCAGTCTAAGATCAGAC
645 GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
* * * * * * * * *
13765729 TGTACCGAGGGTTGCAGCAACAGGATCGGCAGCATGTAGAGAGGGACCCAATCGATCCTCGGCTT
710 CGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAG-GGGACCCGACCGATCCCCGGCTT
* * * * *
13765794 ACGCATCCTGCCCCTCTAGCCGGCTGAGCACCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATA
774 GCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
* * * * *
13765859 TGGAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACC
839 CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * * * *** *
13765915 GCACCAAGGGTTGTGGTATCACATGCTGGGCTAAAGCATGTGCTGGTGCCGCATTTTTCTTCACC
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
** *** * * * * *
13765980 GGGGCACCATCACCGGAGCATTACCGAAGAACCTAACCGGCGGCATTGGGGTTTCGACGATTGGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
*
13766045 GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCC
131 GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* * * *
13766110 CTATCCCTCATCAAAACTCAAGAACT--CACCCCCTTAAAGAGCATTTGAGATTTTATAGCTTTG
196 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
* *
13766173 CTGCTAGTAGCCATGAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
261 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * *
13766238 CACTTCGATTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCA
326 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCA
* * * **
13766303 AGTCTT-TGTCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAA
391 AGT-TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAA
*
13766367 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTACACGTGAAGGCTTAAGGGACCAT
455 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
* **
13766432 TGTCTGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTG-CTGAAACC
520 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCT-AAACC
* *
13766496 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCTGGCGTAGTGCCTGCCC
584 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G--TGCCC
* *
13766561 GCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCAAGTCTAAGATCAGAC
645 GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
** ** * * ** * * * * *
13766626 CAAACAAAGGATTGTGGCAGCAGGATCGATAGCATGCAGTGGGGGACCTGATCGATCCCCAGCTT
710 CGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG-AGGGGACCCGACCGATCCCCGGCTT
* * * * * *
13766691 GCACATCCCGCCTCTCTGGCCGGCTGAGCGCCCGTAAGCTCATTTTGTGGGTTGACTTAGGCATA
774 GCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
* * * *
13766756 CGAAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCAAACT
839 CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * * ** *
13766812 GGACCAAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCATATTTTTCTTCGTC
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * * * * *
13766877 GGGGAACCATCGCCGAAGCATCGTCGGAGAACCTGATCGATGGCTTTGGGGTTCCGACGATCGGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
* *
13766942 GGGGCCGGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTATTTGGCCCTTATATTGGCCC
131 GGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
** * *
13767007 CCTATCCCTTGTCAAACCTCGAGAACTCACACCCCCTTAAAGAACATTTGAGATTTTACAGATTT
195 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
*
13767072 GCTGTCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
260 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* * * *
13767137 ACACATCGAGTTTTTAGCTGAATTTTTTTGAGCATGCCAACAAAAATAAAAGGATCATGTCTACC
325 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
* * * * * ** **
13767202 AAGTTTGGGGCCAAAAATGCTTCTGAAAAAATTTTAAAAAATCCCAAACCATAAAAAGTTTCAAA
390 AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAA
* * *
13767267 AATCATGGAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCCTAAGTGACCAT
455 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
*
13767332 TGTATGAATTTACAAGCCATAAAAATGGCATTGGAACATAGAAATATGAAGATGTGCCTAAACCC
520 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCC
* * *
13767397 ACCTACTACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGCATAGTGCCCGCCCG
585 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCG
* * * * *
13767462 CCCGCCCGGCCACTCATTTCGTCGGTTGGGTTAGGCATATGAAGTTCATTCCCAGTCTAAGATGA
646 CCCGCCC-G---CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * * * * *
13767527 GACTGAACTGAGGGTTGCGGTAGCTGGATAGGCAGCACGCAGAGGGGACCCGATCGATCCTCGGT
707 GACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGACCCGACCGATCCCCGGC
* ** * * *
13767592 TTGTGTGTCCTGCCCCTCTGGCCGGATGAGCGCCCGCACGCTCGTTTCGTGCGTTGACTTAGGCA
772 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
* * *
13767657 TAC-GATGTTTATTCCTAGTCTAAGCATACGGAGTTCATTCACAGTCTAAGATCAGACT
837 TACGGA-GTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
* * **
13767715 GGACCGAGGGTT-CTGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGC
1 GGACCGAGGGTTGC-GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCAT
* * ** * * * * *
13767779 CGAGGCACCATCGCCGGAGCATCACCGGAGAACCTAATCGACGGC-TTCGGGGTTTCGGCGATCA
65 CGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATT-GGGGTTCCGACGATCG
* * * *
13767843 GGGGGACCGGGGGGTGTGCACACATAATGTGCGATGGGTGCTGGTACTTGGCCCTTATAATGGCC
129 GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
*
13767908 CCCTATCCCTTATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
194 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
13767973 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
259 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* *
13768038 TACACTTCGAGTTTTTAGCTGAATTTTTTTGAGAATGCCAACAAAAATACAAGGATCACGTCTAC
324 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* * * *
13768103 CAAGTTTGGGGCTAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCACAAAAAGTTTTGA
389 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGA
* *
13768168 AACTCATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
454 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
13768233 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACC
519 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACC
*
13768298 CACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCTC
584 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-C-C
* * * * *
13768363 GCCCGCCCGCCAGCTCGTTTCATCAGTTGGCTTAGGCATACAGAGTTCATTCTC-GATCTAAGCT
645 GCCCG--C-CC-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG-TCTAAGAT
* * * * * *
13768427 CAGACCAGACCAAGGGTTACGGCAGTAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCCTC
705 CAGACCGGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-GGGGACCCGACCGATCCCC
** * * * * * *
13768492 GATTTGCGCATCTCGCCCCTCTGGCCGGCTGAGCACCCACACGCTCTTTTTGTGGGTTGACATAG
769 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
13768557 GCATACGGAGTTCATTCCCAGTCT----A-A---A----A----C---C--AGA-C-G---
834 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
*
13768592 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTT--T-
1 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
* * *
13768654 ---G------C--CGGAGCATCGTCGGAGAACTTGACCGACGGCATTGGGGTTCCAACGATCAGG
66 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
*
13768708 GGGGCCGGGGGGTGTGGGCACATGATGTGCGATGGGTGCTGGTACTTGG-CC----A-T------
131 GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
13768761 -TA----TCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAAGTTTG
196 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
13768821 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTG
261 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT-
* * * *
13768886 A-ACTTTGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAGTACAACGATCACGTCTACC
325 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
* * *
13768950 AAGTTTGGGGCCAAAACTCCCTCCGAAAAAATATTAAAAAATCTCGAACCGCAAAAATTTTTGAA
390 AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAA
** * *
13769015 AATTGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCAT
455 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
*** *
13769080 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGACGATGTGCCTAAACCC
520 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCC
* * ** *
13769145 ACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCCCTGGCTTGCGTAGTGCCCACCCG
585 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-CC-CGC-
* * * *
13769210 CCGACCCGCTCATTTCGTCGGTTGGCTTAGGCATGCGGAATTCATTCCCAGTCTAAGATTAGACC
647 CCG-CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC
* *
13769275 AGACTGAGGGTTGCGGCAG
711 GGACCGAGGGTTGCGGCAG
13769294 AACATGCTGG
Statistics
Matches: 10110, Mismatches: 1042, Indels: 653
0.86 0.09 0.06
Matches are distributed among these distances:
842 63 0.01
843 3 0.00
844 4 0.00
845 5 0.00
846 406 0.04
847 1 0.00
850 2 0.00
857 1 0.00
858 1 0.00
862 2 0.00
863 86 0.01
864 2 0.00
865 1 0.00
870 8 0.00
871 44 0.00
872 46 0.00
873 127 0.01
874 50 0.00
875 128 0.01
876 36 0.00
877 132 0.01
878 81 0.01
880 3 0.00
881 2 0.00
882 5 0.00
883 6 0.00
884 4 0.00
885 11 0.00
886 317 0.03
887 298 0.03
888 17 0.00
889 756 0.07
890 518 0.05
891 473 0.05
892 15 0.00
893 340 0.03
894 990 0.10
895 318 0.03
896 708 0.07
897 559 0.06
898 155 0.02
899 191 0.02
900 401 0.04
901 10 0.00
902 569 0.06
903 433 0.04
904 614 0.06
905 430 0.04
906 6 0.00
907 4 0.00
909 4 0.00
910 1 0.00
912 2 0.00
913 4 0.00
914 6 0.00
915 92 0.01
916 13 0.00
917 3 0.00
920 2 0.00
921 1 0.00
922 3 0.00
924 3 0.00
926 2 0.00
927 1 0.00
929 2 0.00
931 2 0.00
933 7 0.00
934 2 0.00
936 6 0.00
938 3 0.00
939 15 0.00
940 257 0.03
941 112 0.01
942 170 0.02
943 12 0.00
944 1 0.00
945 1 0.00
946 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (894 bp):
GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCA
AGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAA
ATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATT
GTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCA
CCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGC
CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACC
GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGACCCGACCGATCCCCGGCTTGCGCATC
CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT
Found at i:13759613 original size:26 final size:26
Alignment explanation
Indices: 13759583--13759635 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13759573 GTTGACTTAG
*
13759583 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGCAGTTCATTCCCAGTCTAA
*
13759609 GCATATGCAGTTCATTCCCAGTCTAA
1 GCATACGCAGTTCATTCCCAGTCTAA
13759635 G
1 G
13759636 ATCAGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGCAGTTCATTCCCAGTCTAA
Found at i:13761389 original size:26 final size:26
Alignment explanation
Indices: 13761360--13761412 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13761350 GTTGACTTAG
*
13761360 GCATACGGAGTTCATTGCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
13761386 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
13761412 G
1 G
13761413 ATTGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:13763176 original size:26 final size:26
Alignment explanation
Indices: 13763139--13763191 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13763129 GTTGACTTAG
*
13763139 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
13763165 GCATACAAAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
13763191 G
1 G
13763192 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.26, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACAAAGTTCATTCCCAGTCTAA
Found at i:13764987 original size:26 final size:26
Alignment explanation
Indices: 13764958--13765010 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13764948 GTTGACTTAG
* *
13764958 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
13764984 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
13765010 G
1 G
13765011 ATCGGACCGC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:13765890 original size:26 final size:26
Alignment explanation
Indices: 13765854--13765906 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13765844 GTTGACTTAG
* * *
13765854 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
13765880 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
13765906 G
1 G
13765907 ATCGGACCGC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:13766455 original size:896 final size:899
Alignment explanation
Indices: 13764714--13769293 Score: 5892
Period size: 896 Copynumber: 5.2 Consensus size: 899
13764704 GCCACGTAGT
** * * *
13764714 CCCTATCGAT-CACGGCTTGCGCATCATGTCTCT-TGGTCGACGTAGTGCCCGCCCGCCCGCCCG
1 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CC-CAC-
* * * * *
13764777 TCCTGCTCGTTTCATCGATT-GCTTAGGCATACGGAGTTCATT-CCAGTCT-AGATCGGACTGGA
63 -CCAGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGAA
* * * * * *
13764839 TCGAGGGTTGCAG-AACAGGATCGGCAGCAC-TAG-GGGCGGACCCGACCGATCCTCGGCTTACG
127 CCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGG-GGACCCGATCGATCCTCGGCTTGCG
* * * * * * *
13764901 CATCCCGCCCTTCTAGCTGGCTAAGCAGCCGCATGCTCGTTTCGTGGGTTGACTTAGGCATACGG
191 CATCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGG
* *
13764966 AGTTTATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGTT
256 AGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGTT
* * *** * *
13765031 GTGGTATCACATGCTGGGCTAAAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCA
321 GTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCA
* * *
13765096 CCGGAGCATTACCGAAAGAA-CTAACCGGCGGCATTGGGGTTTCGACGAT-TGGGGGGCCGGGGG
386 CCGGAGCATTACCG-GAGAACCTAACCGACGGCATTGGGGTTTCGACGATCAGGGGGGCCGGGGG
13765159 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCCCTATCCCTCAT
450 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCCCTATCCCTCAT
* * *
13765224 CAAAACTCAAGAACT-CACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCC
515 CAAACCTCGAGAACTACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
* * * *
13765288 ATGAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTC
580 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * *
13765353 TTGGCTGAATTTTTTTTGTGCATGCCAACAAAAATACAAGCATCACGTCTACCAAGTTTGGGTCC
645 TTAGCTGAA-TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
* * * *
13765418 AAAACTCCATCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAA
709 AAAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAA
* *
13765483 TAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTCTGAATTTA
774 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
13765548 CAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA
839 CAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* *
13765609 CCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCCACCC-
1 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCCA
*
13765673 GCTCGTTTCGTCGGTTGGCTTAGGCATAC-GAGTTCATTCCCAGTCTAAGATCAGACTGTACCGA
66 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGAACCGA
* * * * * * *
13765737 GGGTTGCAGCAACAGGATCGGCAGCATGTAGAGAGGGACCCAATCGATCCTCGGCTTACGCATCC
131 GGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCCTCGGCTTGCGCATCC
* * *
13765802 TGCCCCTCTAGCCGGCTGAGCACCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTC
196 TGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
*
13765867 ATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGTTGTGGT
261 ATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGTTGTGGC
* *** * *
13765932 ATCACATGCTGGGCTAAAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCGGA
326 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCACCGGA
* * **
13765997 GCATTACCGAAGAACCTAACCGGCGGCATTGGGGTTTCGACGATTGGGGGGGCCGGGGGGTGTGC
391 GCATTACCGGAGAACCTAACCGACGGCATTGGGGTTTCGACGATCAGGGGGGCCGGGGGGTGTGC
*
13766062 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCCCTATCCCTCATCAAAAC
456 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCCCTATCCCTCATCAAACC
* * * * *
13766127 TCAAGAACT-CACCCCCTTAAAGAGCATTTGAGATTTTATAGCTTTGCTGCTAGTAGCCATGAAA
521 TCGAGAACTACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
*
13766191 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCT
586 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
* * * *
13766256 GAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTCTT-TGTCCAAAACT
651 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT-TTGGGGCCAAAACT
13766320 CCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAA
715 CCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAA
* *
13766385 ACGAGTCGTCTTGCCATGAAACTACACGTGAAGGCTTAAGGGACCATTGTCTGAATTTACAAGCC
780 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
13766450 ATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTG-CTGAAACCCACCTACCA
845 ATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCT-AAACCCACCTACCA
* * *
13766505 CCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCTGGCGTAGTGCCTGCCCGCCCACCC-
1 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCCA
* ** **
13766569 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCAAGTCTAAGATCAGACCAAACAAA
66 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGAACCGA
* * ** * * * * * *
13766634 GGATTGTGGCAGCAGGATCGATAGCATGCAGTGGGGGACCTGATCGATCCCCAGCTTGCACATCC
131 GGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCCTCGGCTTGCGCATCC
* * * * * * * *
13766699 CGCCTCTCTGGCCGGCTGAGCGCCCGTAAGCTCATTTTGTGGGTTGACTTAGGCATACGAAGTTC
196 TGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
* * ** * * ** *
13766764 ATTCCTAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCAAACTGGACCAAGGGTTACGAC
261 ATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGTTGTGGC
* * * * *
13766829 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCATATTTTTCTTCGTCGGGGAACCATCGCCGAA
326 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCACCGGA
*** * * * * * *
13766894 GCATCGTCGGAGAACCTGATCGATGGCTTTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTG
391 GCATTACCGGAGAACCTAACCGACGGCATTGGGGTTTCGACGATCAGGGGGGCC-GGGGGGTGTG
* * * **
13766959 TGCACATGATGTGCGATGGGTGCTGGTATTTGGCCCTTATATTGGCCCCCTATCCCTTGTCAAAC
455 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCCCTATCCCTCATCAAAC
* * *
13767024 CTCGAGAACTCACACCCCCTTAAAGAACATTTGAGATTTTACAGATTTGCTGTCAGTAGCCATTA
520 CTCGAGAACT-ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
13767089 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAG
584 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * * *
13767154 CTGAATTTTTTTGAGCATGCCAACAAAAATAAAAGGATCATGTCTACCAAGTTTGGGGCCAAAAA
649 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * ** *
13767219 TGC-TTCTGAAAAAATTTTAAAAAATCCCAAACCATAAAAAGTTTCAAAAATCATGGAAAATAGA
714 TCCTTTC-GAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGA
* *
13767283 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCCTAAGTGACCATTGTATGAATTTACAAG
778 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* ** *
13767348 CCATAAAAATGGCATTGGAACATAGAAATATGAAGATGTGCCTAAACCCACCTACTA
843 CCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * * *
13767405 CCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCG
1 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCCA
* * * * *
13767470 GCCACTCATTTCGTCGGTTGGGTTAGGCATATGAAGTTCATTCCCAGTCTAAGATGAGACTGAAC
66 G---CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGAAC
* * * * * * **
13767535 TGAGGGTTGCGGTAGCTGGATAGGCAGCACGCAGA-GGGGACCCGATCGATCCTCGGTTTGTGTG
128 CGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCCTCGGCTTGCGCA
* * *
13767599 TCCTGCCCCTCTGGCCGGATGAGCGCCCGCACGCTCGTTTCGTGCGTTGACTTAGGCATAC-GAT
193 TCCTGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA-
* * * * * * * *
13767663 GTTTATTCCTAGTCTAAGCATACGGAGTTCATTCACAGTCTAAGATCAGACTGGACCGAGGGTTC
257 GTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGTTG
* * *
13767728 TGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGAGGCACCATCGC
322 TGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCAC
* * * *
13767793 CGGAGCATCACCGGAGAACCTAATCGACGGC-TTCGGGGTTTCGGCGATCAGGGGGACCGGGGGG
387 CGGAGCATTACCGGAGAACCTAACCGACGGCATT-GGGGTTTCGACGATCAGGGGGGCCGGGGGG
* * *
13767857 TGTGCACACATAATGTGCGATGGGTGCTGGTACTTGGCCCTTATA-ATGGCCCCCTATCCCTTAT
451 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATA-GGCCCCCTATCCCTCAT
13767921 CAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
515 CAAACCTCGAGAACT-ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
13767986 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
579 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
* * *
13768051 TTTAGCTGAATTTTTTTGAGAATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCT
644 TTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
* * ** *
13768116 AAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCACAAAAAGTTTTGAAACTCATGAAAAA
709 AAAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAA
*
13768181 TAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
774 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
**
13768246 CAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
839 CAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * *
13768307 CCCTATCGATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCTCGCCCGCCCG
1 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CC-CAC-
* * * * * *
13768372 CCAGCTCGTTTCATCAGTTGGCTTAGGCATACAGAGTTCATTCTC-GATCTAAGCTCAGAC-CAG
63 CCAGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG-TCTAAGATCAGACTGA-
* * * **
13768435 ACCAAGGGTTACGGCAGTAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCCTCGATTTGCG
126 ACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCCTCGGCTTGCG
* * * *
13768500 CAT-CTCGCCCCTCTGGCCGGCTGAGCACCCACACGCTCTTTTTGTGGGTTGACATAGGCATACG
191 CATCCT-GCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACG
* *
13768564 GAGTTCATTCCCAGTCT----A-A---A----A---CC------AGA-CGG---G-ACCGAGGGT
255 GAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGT
* * *
13768603 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTTGCC--GG-AGCAT-
320 TGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATC
* * * *
13768664 --C---G---T--CGGAGAACTTGACCGACGGCATTGGGGTTCCAACGATCAGGGGGGCCGGGGG
385 ACCGGAGCATTACCGGAGAACCTAACCGACGGCATTGGGGTTTCGACGATCAGGGGGGCCGGGGG
*
13768719 GTGTGGGCACATGATGTGCGATGGGTGCTGGTACTTGG-CC----AT--------TA----TCAT
450 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCCCTATCCCTCAT
* *
13768767 CAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGC
515 CAAACCTCGAGAACT-ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
*
13768832 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTGA-ACTTTGAGT
579 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT-ACACTTCGAGT
* * *
13768896 TTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAGTACAACGATCACGTCTACCAAGTTTGGGGC
643 TTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* * * * ** **
13768961 CAAAACTCCCTCCGAAAAAATATTAAAAAATCTCGAACCGCAAAAATTTTTGAAAATTGTGAAAA
708 CAAAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAA
* *
13769026 ATAGAAAATGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTT
773 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* *
13769091 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGACGATGTGCCTAAACCCACCTACCA
838 ACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * ** * *
13769153 CCCTATCGATCCACGGCTTACGCATCCCGTCTCCCTGGCTTGCGTAGTGCCCACCCGCCGACCC-
1 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCCA
* * * * * *
13769217 GCTCATTTCGTCGGTTGGCTTAGGCATGCGGAATTCATTCCCAGTCTAAGATTAGAC-CAGACTG
66 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGA-ACCG
13769281 AGGGTTGCGGCAG
130 AGGGTTGCGGCAG
13769294 AACATGCTGG
Statistics
Matches: 3313, Mismatches: 333, Indels: 131
0.88 0.09 0.03
Matches are distributed among these distances:
842 63 0.02
843 3 0.00
844 1 0.00
845 2 0.00
846 412 0.12
847 1 0.00
850 2 0.00
858 1 0.00
862 2 0.00
863 77 0.02
864 2 0.00
868 1 0.00
871 1 0.00
874 4 0.00
875 2 0.00
877 59 0.02
878 1 0.00
881 2 0.00
882 3 0.00
888 1 0.00
891 1 0.00
892 23 0.01
893 21 0.01
894 23 0.01
895 36 0.01
896 598 0.18
897 519 0.16
898 79 0.02
899 6 0.00
900 389 0.12
901 5 0.00
902 556 0.17
903 333 0.10
904 81 0.02
905 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (899 bp):
CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCCA
GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGAACCGA
GGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGATCGATCCTCGGCTTGCGCATCC
TGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
ATTCCTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGACCGCACCAAGGGTTGTGGC
AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCACCGGA
GCATTACCGGAGAACCTAACCGACGGCATTGGGGTTTCGACGATCAGGGGGGCCGGGGGGTGTGC
GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATAGGCCCCCTATCCCTCATCAAACC
TCGAGAACTACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
CTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
TAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA
Found at i:13766788 original size:26 final size:26
Alignment explanation
Indices: 13766751--13766803 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13766741 GTTGACTTAG
13766751 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
*
13766777 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
13766803 G
1 G
13766804 ATCAAACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCTAGTCTAA
Found at i:13767696 original size:26 final size:26
Alignment explanation
Indices: 13767654--13767706 Score: 65
Period size: 26 Copynumber: 2.0 Consensus size: 26
13767644 GTTGACTTAG
*
13767654 GCATACGATGTTTATTC-CTAGTCTAA
1 GCATACGATGTTCATTCAC-AGTCTAA
13767680 GCATACGGA-GTTCATTCACAGTCTAA
1 GCATAC-GATGTTCATTCACAGTCTAA
13767706 G
1 G
13767707 ATCAGACTGG
Statistics
Matches: 24, Mismatches: 1, Indels: 4
0.83 0.03 0.14
Matches are distributed among these distances:
26 21 0.88
27 3 0.12
ACGTcount: A:0.28, C:0.21, G:0.19, T:0.32
Consensus pattern (26 bp):
GCATACGATGTTCATTCACAGTCTAA
Found at i:13770144 original size:26 final size:26
Alignment explanation
Indices: 13770114--13770166 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13770104 GTTGACTTAG
13770114 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
13770140 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
13770166 G
1 G
13770167 ATCGGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:13771628 original size:26 final size:26
Alignment explanation
Indices: 13771599--13771651 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13771589 CCGATCCGAT
* *
13771599 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
13771625 CTTAGACTGGGAAAGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
13771651 C
1 C
13771652 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCGTATG
Found at i:13772419 original size:11 final size:11
Alignment explanation
Indices: 13772400--13772431 Score: 55
Period size: 11 Copynumber: 2.9 Consensus size: 11
13772390 GGTCAGGTTT
*
13772400 TCCGCCGATGC
1 TCCGGCGATGC
13772411 TCCGGCGATGC
1 TCCGGCGATGC
13772422 TCCGGCGATG
1 TCCGGCGATG
13772432 ATGCCCCGGT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
11 20 1.00
ACGTcount: A:0.09, C:0.38, G:0.34, T:0.19
Consensus pattern (11 bp):
TCCGGCGATGC
Found at i:13773467 original size:26 final size:26
Alignment explanation
Indices: 13773424--13773476 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13773414 CCAGTCTGAT
* *
13773424 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGCAAAGAACTCCGTATG
13773450 CTTAGACTGGCAAAGAACTCCGTATG
1 CTTAGACTGGCAAAGAACTCCGTATG
13773476 C
1 C
13773477 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGCAAAGAACTCCGTATG
Found at i:13774956 original size:26 final size:26
Alignment explanation
Indices: 13774927--13774979 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13774917 CTGATCCGAT
*
13774927 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTACGTATG
*
13774953 CTTAGACTGGGAATGAACTACGTATG
1 CTTACACTGGGAATGAACTACGTATG
13774979 C
1 C
13774980 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTACGTATG
Found at i:13776784 original size:26 final size:26
Alignment explanation
Indices: 13776706--13776776 Score: 142
Period size: 26 Copynumber: 2.7 Consensus size: 26
13776696 CCGGTCCGAT
13776706 CTTAGACTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
13776732 CTTAGACTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
13776758 CTTAGACTGGGAATGAACT
1 CTTAGACTGGGAATGAACT
13776777 TTGTATGCCT
Statistics
Matches: 45, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 45 1.00
ACGTcount: A:0.31, C:0.15, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:13778533 original size:26 final size:26
Alignment explanation
Indices: 13778504--13778556 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
13778494 CCGATCCGAT
*
13778504 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
13778530 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
13778556 C
1 C
13778557 GTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:13779441 original size:26 final size:26
Alignment explanation
Indices: 13779390--13779442 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13779380 CCAGTCCGAT
*
13779390 CTTAGACTGGGAATGAAATCTATATG
1 CTTAGACTGGGAATGAAATCCATATG
* *
13779416 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAAATCCATATG
13779442 C
1 C
13779443 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCATATG
Found at i:13780359 original size:26 final size:26
Alignment explanation
Indices: 13780308--13780360 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
13780298 CTGATCCAAT
**
13780308 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
13780334 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
13780360 C
1 C
13780361 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:13780842 original size:895 final size:894
Alignment explanation
Indices: 13774638--13781305 Score: 7922
Period size: 877 Copynumber: 7.4 Consensus size: 894
13774628 TGACTTGTTT
*
13774638 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATCCTCTTTAAGGGGGTGTGAGTTCTCG
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* *
13774703 AGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTG
66 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * *
13774768 CGCACACCCCCCCTCGGCCCCCCCGATCGTCGGGACACCAATGCCG-CTGGTAAGGTTCTCCGAC
131 CGCACA-CCCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGC
* * * *
13774832 GATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGTCCAGCTT
193 GATGCT-CAACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * * *
13774897 GTACTGCTGCAACCCTCGGTCTGATCCGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTG
257 GTGCTACCGCAACCCTCGATC-GATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTG
* * * * ** **
13774962 GGAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGTACAGTTGCTCAGATGGCCAGAG
321 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAG
* * * * * *
13775027 GGGCGGGATGTGCAAGCCAGGGATCAGCTG-GATCCCCCTCTACGTGCTGTCGATCCTGCTACCG
386 GGGCGGGATGCGCAAGTCGGGGATCGGCCGAG-TCCCCCTCTACGTGCTGCCGATCCTGCTACCG
* * *
13775091 CAACCCTCAGTCCT-ATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGA
450 CAACCCTCAGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-
* * *
13775155 AACAAGCGGGCGGGCGGACGGGCGGGCACTACGTCAGCCAGAGAGACGGGATGCGCAAGCCGTGG
513 -A-AA-CGAGC--G-GG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
13775220 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
571 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
* * *
13775285 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCCAGAC-AGCTCA
636 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-CTCG
* * * * *
13775349 TTTTTTATTTTTCATGATTTTTAAA-ACTTTTACAGTTCGGGATTTTTTTAAAATTTTTTCAAAA
700 TTTTCTATTTTTCATGATTTTGAAACATTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTCGAAA
* * * * *
13775413 GAAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGGAAAAAAAAATT
764 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATT
* *
13775478 CAGCTAAAAAGTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACA
829 CAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
13775543 C
894 C
* ** *
13775544 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTAATTAAGGGGGTGTGAGTTCTCA
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * *
13775609 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACCAGCACCCATCGCGCATGATGTG
66 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
** * * * * *
13775674 CGCA-TGCCCCCCGACCCCCACGATCGTCGTAACCTCAATGCCG-CTGGTCAGGTTCTCCGGTGA
131 CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGA
* * * *
13775737 TGCTCCCACGATGGTGCTCTGGCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGT
195 TGCT-CAACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* *
13775802 GCTATCGTAA-CC-C--TC-A---G-TC-----C---G---G---TCTG-AT-CTTAGACTGGGA
259 GCTACCGCAACCCTCGATCGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGA
* * *
13775842 ATGAACTCCGTACGCCTAAGTCAACCCATGAAATGAG-AGTGCGGGCGCTCAGCCGGCCAGAGGG
324 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCA-TGCGGGCGCTCAGCCGGCCAGAGGG
** * * * * * *
13775906 GTTGGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACATGCTGCCGATCCTGCTACTGCAA
388 GCGGGATGCGCAAGTCGGGGATCGGCCGAGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAA
* * * * *
13775971 ACCTCAGCCCGATCCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAAC
453 CCCTCAGTCTGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* ** *
13776035 GAGCGGGCGAGTGGACGGACGGGCATTACGTTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATT
517 GAGCGGGC-----G--GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
*
13776100 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGG
574 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* *
13776165 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTT
639 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
*
13776230 CTATTTTTCATGATTTTTGAAAC-TTTTTACAGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAG
704 CTATTTTTCATGA-TTTTGAAACATTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAG
* * *
13776294 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGCATTTTTATTGGCATGCACAAAAAAATTCAGC
768 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
** * *
13776359 TAAAAACTTGAACTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCACCATTTCAGACAC
833 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * ** * *
13776420 TTTAACGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAAGGTCTGAGTTCTCA
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * * * *
13776485 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTACCGGCACCCGTCGGACATGATGTG
66 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * * * *
13776550 CGCATA-CCCCCCGGCCCCCACGATCATTGGAACCCCAATGCCGTCGGTTACGTTCTCTGGCGAT
131 CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* ** * * *
13776614 GCTCTGACGATGGTGCCAGGGCAAAGAAAAATGCTGCACCAGCACATGCCTGAGCCCAGCATGTG
196 GCTC-AACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
*
13776679 CTACCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGA
260 CTACCGCAA----C---CC--T-CGA---T---C---G-AT---C--CG-AT-CTTAGACTGGGA
**
13776744 ATGAACTAC-GTATGCTTAGACTGGGAATGAACTTTGTATGCCTAAGTCAACCCACGAAACGAGC
298 ATGAACT-CTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * *
13776808 GTGCAGGG-GCTCAGCTGGCCAGA-GAGCGGGATGCACAAGTCGGGGATCTGTCGCA-TCCCCCT
362 ATGC-GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCG-AGTCCCCCT
* * * * * ** * * * *
13776870 CTGCGTGCTACTGATCCTACTGCTACAACCCAT-GGTCCGCTCTGATCTTAGACTAGGAATGAAC
425 CTACGTGCTGCCGATCCTGCTACCGCAACCC-TCAGTCTGGTCTGATCTTAGACTGGGAATGAAC
*
13776934 TCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGTGGACGGGCGGGCACTACGCCGGCCAGAGA
489 TCCGTATGCCTAAGCCAACCGACGAAACGAGC--G-GG-CGGGCGGGCACTACGCCGGCCAGAGA
* * *
13776999 GATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGATGGGTTTAGGTACATCTTCATATTTCT
550 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
13777064 ACATGTCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
615 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * * *
13777129 TTTCATGGCAAGACGACTCCTTTTCTATTTTTCATTATTTTCGAAAC-TTTTTACGATCCGAGAT
680 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT-GAAACATTTTTACGGTTCGGGAT
* * * * *
13777193 TTTTTAAAATTCTTTCGTAAGGAATTTTGGCCCCAAACTAGGTAGACGTGATCCTTGTATTTTTA
744 TTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTT
* * * **
13777258 TTGGCAGGCGCAAAAATATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAA
809 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAA
*
13777323 AAGTGTCCCTATTTCAGACAC
874 AAGTGTCCCCATTTCAGACAC
*
13777344 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATTGCTCTTTTAAGGGGGTGTGAGTTCTC
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTC
* *
13777409 AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC-GTCACCCATTGCACATCATG
65 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG-CACCCATCGCACATCATG
* * * *
13777473 TGCGCACACCCCCCCCGGCCCCTCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCTGGC
129 TGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGC
* * * * ** *
13777538 GATGCTCCGACGATGGTACCCCGGTGAAGAAAAATGCGGCACCAG-ATATTTCTGAGCCCAGCAT
193 GATGCT-CAACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * * ** * *
13777602 GTGCTATCGTAACCCTCGATCCATTCCGATCATAGACAGGGAATGAACTCCATATGCTTAGAATA
257 GTGCTACCGCAACCCTCGATCGA-TCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTG
* * * *
13777667 GGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAG
321 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAG
* * * * ** * * *
13777732 GGGTGGGATGCACAAGTCGAGGATTGGCCGAGTCCCCGACTGCGTGCTGTCGATCCTGCTACTGC
386 GGGCGGGATGCGCAAGTCGGGGATCGGCCGAGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGC
* * * *
13777797 AACCCTCAATCTGGTCCGATCTTAGACTGGGAATGAAGTCCGTATGCCTAAGCCAACCAACGAAA
451 AACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
13777862 TGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGATACGGGATGCGCAAGCCGTGGATCGATAGGG
516 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
**
13777927 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTGGA
581 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* *
13777992 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTAT
646 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * *
13778057 TCACGATTTTTGAAAC-TTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGC
711 TCATGA-TTTTGAAACATTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGC
* * * *
13778121 CCCAATCTTGGTAGCCATGATCCTTGT-TTTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAA
775 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
13778185 CTCCAAGTGTACAATATTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAGACAC
839 CTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
13778241 TTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGTTCTTTAAGGGGGTGTGAGTTCTCG
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
13778306 AGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
66 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * ** *
13778371 CGCACACCCCCCCCGGCCCACCTGATCACCGGAACCCGAA-----T--GTC--G---T----CG-
131 CGCACA-CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
* * * *
13778419 -G-TCAA-G-T--T-CTCCGGCGAAGAAAAATGCGGCACTAGCACATGCTCGAGCCCGGCATGTG
195 TGCTCAACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* *
13778477 CTACCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
260 CTACCGCAACCCTCGAT-CGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGA
* * * * *
13778542 ATGAACTCCATATGCGTAAGTCAACCCACGAAACGAGAATGCGGGCACTCAGCCGACCAGAGGGG
324 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * * *
13778607 CGGGATGTGCAAG-CTGGGGATCGACCGACTCCCTCTCTACGTGCTACCGATCCTGCTGCCGCAA
389 CGGGATGCGCAAGTC-GGGGATCGGCCGAGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAA
* ** * * *
13778671 CCCTC-GATCCGGTCTGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCTAACTGACAAAAC
453 CCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* *
13778735 GAGCGGGCGGGCAGGCGGGCACTACGCAGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATA
517 GAGCGGGC--G--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
*
13778800 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCATTTTTATGGCTTGT
578 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGT
* *
13778865 AAATTCATACAATGGTCCCTTAAGCCTTCACGTG-TGTTTCATGGCAAGACAACTCGTTTTCTAT
643 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
** ** *
13778929 TTTTCATGATTTTCGAAACA-TTTTGGGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
708 TTTTCATGATTTT-GAAACATTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTT
* * *
13778993 GGCCCCAAACTTGGTACACGTGATCCTTGTATTTTTTTTGACGTGCA-AAACAAAATTTC-GCTA
772 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA-AAAA-TTCAGCTA
* *
13779056 AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTTAGACAC
835 AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
13779116 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGTTCTTTAAGGGGGTATGAGTTCTCG
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
13779181 AGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTG
66 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * ** * * * *
13779246 TGAATACCCCTTC-G-CCCCCCGATCGTCGAAACCTCAAAGCCGTCGGTTAGGTTCT-C--C---
131 CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* * * * * *
13779303 G----ACGTTGGTGCCCCGACGAAGAAAAATGTGGCAGCAGCACCTGCACGAGCCCAGCATGTGC
196 GCTCAACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * *
13779364 TACCTCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAAATCTATATGCTTAGACTGGGAA
261 TACCGCAACCCTCGATCGA-TCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
* * *
13779429 TGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGC
325 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGC
* ** * ** * *
13779494 GGGATGCGCAAG-CTGGGATCGATCGGGTCCCCCTCGGCGTGCTGCTGATCTTGCTACCGCAACC
390 GGGATGCGCAAGTCGGGGATCGGCCGAGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAACC
* *
13779558 CTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACTGATGAAACGAG
455 CTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC--------CGA-
*
13779623 CGGATGGGCGGGCGAGCAGGCG-GACGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGC
511 C-GA----------A--A--CGAG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * * **
13779687 GCAAGCCATGTATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGGGTGCCAAT
560 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
13779752 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
625 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * *
13779817 AGACGACTCGTTTT-TATTTTTCACGATTTTTAAA-ACTTTTTGCCGTTCGGGATTTTTTAAAAT
690 AGACGACTCGTTTTCTATTTTTCATGATTTTGAAACA-TTTTTACGGTTCGGGATTTTTTAAAAT
* * * *
13779880 TTTTTC-AGAAGGAGTTTTGGCCCCGAACTTGGTAGACGTGATCGTTGTATTTTTGTTT-CCTTG
754 TTTTTCGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTTGGCATG
* *
13779943 CACAAAAGAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGAGCATTTGAAAAAAGTGTCC
817 CACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
13780008 CCATTTCAGACAC
882 CCATTTCAGACAC
13780021 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
** * * * *
13780086 AGGTTTGATGAGGGATAGGGGGAAAATATAAGGGCCAAGTACTAGCACCCATCGCACGTCGTTTG
66 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * ** * * **
13780151 CGCACACCTCGCCGGCCCGCTCGATCACCGGAACCCTAATGCCGTCGGTCTGGTTCTCCGTTGAT
131 CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* *
13780216 GCTCAGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTG
196 GCTCA-ACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
13780281 CTACCGCAACACTCGATCTGATCCAATCTTAGACTGGGAATGAACTCTGTATGCTTAGATTGGGA
260 CTACCGCAACCCTCGATC-GATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGA
* * * *
13780346 ATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCATGCAGACGCTCAGCCGGCCAGAGGGG
324 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGG
* * * *
13780411 CAGGATGCGTAAGTCGGGGATCGGCCTAGTCCCCCTCTACGTGCTGCCGATCCTGCTACCACAAC
389 CGGGATGCGCAAGTCGGGGATCGGCCGAGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAAC
* * * *
13780476 CATCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCAGTATGCCTAAGCTAACCGACGAAACGA
454 CCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
*
13780541 GCGGGCGGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
519 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * *
13780606 TAGGTGGGTTTAGGTACATCTTCATATTTTTGCATGCCAATGCCATTTGTATGGCTTGTAAATTC
584 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * * *
13780671 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAACATGACTCATTTTCTATTTGTCA
649 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * * *
13780736 CGATTTTGAAACATTTTTGCGGTTCAGGATTTTTTAAAATTCTTTT-GGAAGGATTTTTGACCCC
714 TGATTTTGAAACATTTTTACGGTTCGGGATTTTTTAAAATT-TTTTCGAAAGGAGTTTTGGCCCC
* *
13780800 AAACTT-CTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
778 AAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
* * *
13780864 AAGTGTACAAGATTTTGTGACCATTTGAAATAAGTGTCCTCATTTCAAACAC
843 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
13780916 TTTAATGGCTACTGGCTGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
1 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * * *
13780981 AGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATAGCACAACTTGTG
66 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* ** ***
13781046 TGCACA-CCCCTTGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAATGAT
131 CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* * * *
13781110 GCTCCAATGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCATGTG
196 GCT-CAACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
13781175 C-AGCCACAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAACT-TCGTATGCTTAGACTGG
260 CTA-CCGCAACCCTCGAT-CGATCCGATCTTAGACTGGGAATGAACTCT-GTATGCTTAGACTGG
* * * * *
13781238 GAATGAACTCCGTGTGCCAAAGTCAACCCACGAAATGA-AAGTGCGGGCGCTCAGTCGGCCAGAG
322 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCA-TGCGGGCGCTCAGCCGGCCAGAG
13781302 GGGC
386 GGGC
13781306 TTTTTTAAAA
Statistics
Matches: 4980, Mismatches: 595, Indels: 386
0.84 0.10 0.06
Matches are distributed among these distances:
869 1 0.00
870 2 0.00
871 26 0.01
872 251 0.05
873 7 0.00
874 17 0.00
875 307 0.06
876 409 0.08
877 463 0.09
878 29 0.01
879 5 0.00
880 2 0.00
881 2 0.00
882 2 0.00
883 1 0.00
884 5 0.00
885 90 0.02
886 170 0.03
887 1 0.00
888 2 0.00
889 3 0.00
893 8 0.00
894 217 0.04
895 397 0.08
896 186 0.04
897 375 0.08
898 6 0.00
899 8 0.00
900 84 0.02
901 111 0.02
902 4 0.00
903 106 0.02
904 12 0.00
905 427 0.09
906 157 0.03
907 34 0.01
908 2 0.00
909 10 0.00
910 2 0.00
911 4 0.00
912 1 0.00
913 2 0.00
916 3 0.00
917 2 0.00
918 178 0.04
919 92 0.02
920 1 0.00
922 5 0.00
923 310 0.06
924 65 0.01
925 82 0.02
926 30 0.01
927 194 0.04
928 63 0.01
929 4 0.00
930 2 0.00
931 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (894 bp):
TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
GCTCAACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
TACCGCAACCCTCGATCGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAAT
GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCG
GGATGCGCAAGTCGGGGATCGGCCGAGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAACCC
TCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
ATTTTGAAACATTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAA
CTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAG
TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
Found at i:13781779 original size:26 final size:26
Alignment explanation
Indices: 13781743--13781795 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13781733 TAGGTCTGAT
*
13781743 CTTATATTGGGAATGAACTCCATATG
1 CTTAGATTGGGAATGAACTCCATATG
*
13781769 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCATATG
13781795 C
1 C
13781796 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.23, T:0.32
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCATATG
Found at i:13781787 original size:541 final size:541
Alignment explanation
Indices: 13780765--13781844 Score: 1647
Period size: 541 Copynumber: 2.0 Consensus size: 541
13780755 CGGTTCAGGA
* * * * *
13780765 TTTTTTAAAATTCTTTTGGAAGGATTTTTGACCCCAAACTTCTAGACGTGATCCTTGTATTTTTT
1 TTTTTTAAAATTCTTTTGGAAGGACTCTTCACCCCAAACTTCTAGACGTGATCCTTATATTTTTG
* *
13780830 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAT
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTGTGACCATTTGAAAA
*
13780895 AAGTGTCCTCATTTCAAACACTTTAATGGCTACTGGCTGCAAACTTGTAAAATCTCAAATGCTCT
131 AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCTGCAAACTTGTAAAATCTCAAATGCTCT
* *
13780960 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* *
13781025 GCACCCATAGCACAACTTGTGTGCACACCCCTTGGCCCCCCCGATCGTCGGAACCCCAATGCCGT
261 GCACCCATAGCACAACATGTGTGCACACCCCTCGGCCCCCCCGATCGTCGGAACCCCAATGCCGT
* * ** **
13781090 CGGTCAGGTTCTCCAATGATGCTCCAATGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCAC
326 CGATCAGGTTCTCCAATGATGCTCCAACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCAC
*
13781155 ATGCCCGAGCCTAGCATGTGCAGCCACAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAAC
391 ATGCCCGAGCCTAGCATGTGCAGCCACAACCCTCGATCAGGTTCGATCTTAGACTGGGAATGAAC
* * * *
13781220 TTCGTATGCTTAGACTGGGAATGAACTCCGTGTGCCAAAGTCAACCCACGAAATGAAAGTGCGGG
456 TCCATATGCTTAGACTGGGAATGAACTCCGTATGCCAAAGTCAACCCACGAAACGAAAGTGCGGG
13781285 CGCTCAGTCGGCCAGAGGGGC
521 CGCTCAGTCGGCCAGAGGGGC
*
13781306 TTTTTTAAAATT-TTTTCGGAAGGACTCTTCACCCCAAACTTGGTAGA-GTGATCCTTATATTTT
1 TTTTTTAAAATTCTTTT-GGAAGGACTCTTCACCCCAAACTT-CTAGACGTGATCCTTATATTTT
* *
13781369 TGTTGGCATGCACAAAAAAATTCAGCTAAAAGCTCGAAGTGTACAATATATTGTGACCATTTGAA
64 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTGTGACCATTTGAA
*
13781434 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG-TAGCAAACTTGTAAAATCTCAAATGC
129 AAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCT-GCAAACTTGTAAAATCTCAAATGC
13781498 TCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
193 TCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
13781563 CCAGCACCCATCA-CACATCATGTGTGCACATCCCC-CGGGCCCCCCGATCG-CAGGAGCCCCAA
258 CCAGCACCCAT-AGCACAACATGTGTGCACA-CCCCTCGGCCCCCCCGATCGTC-GGAACCCCAA
*
13781625 TGCCGTCGATCAGGTTCTCCAATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCAC
320 TGCCGTCGATCAGGTTCTCCAATGATGCTCCAACGATGGTGCCCCGACGAAGAAAAATACGGCAC
** * * * *
13781690 CATTACATGCCCGAG-CTCAGCATGTGCTA-CCGCAACCCTCGATTAGG-TCTGATCTTATATTG
385 CAGCACATGCCCGAGCCT-AGCATGTGC-AGCCACAACCCTCGATCAGGTTC-GATCTTAGACTG
* *
13781752 GGAATGAACTCCATATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
447 GGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCAAAGTCAACCCACGAAACGA
**
13781817 GCGTGCGGGCGCTCAGTCGGCCAGAGGG
512 AAGTGCGGGCGCTCAGTCGGCCAGAGGG
13781845 AGGGATGCGT
Statistics
Matches: 489, Mismatches: 41, Indels: 18
0.89 0.07 0.03
Matches are distributed among these distances:
540 10 0.02
541 469 0.96
542 10 0.02
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.25
Consensus pattern (541 bp):
TTTTTTAAAATTCTTTTGGAAGGACTCTTCACCCCAAACTTCTAGACGTGATCCTTATATTTTTG
TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTGTGACCATTTGAAAA
AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCTGCAAACTTGTAAAATCTCAAATGCTCT
TTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
GCACCCATAGCACAACATGTGTGCACACCCCTCGGCCCCCCCGATCGTCGGAACCCCAATGCCGT
CGATCAGGTTCTCCAATGATGCTCCAACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCAC
ATGCCCGAGCCTAGCATGTGCAGCCACAACCCTCGATCAGGTTCGATCTTAGACTGGGAATGAAC
TCCATATGCTTAGACTGGGAATGAACTCCGTATGCCAAAGTCAACCCACGAAACGAAAGTGCGGG
CGCTCAGTCGGCCAGAGGGGC
Found at i:13784411 original size:26 final size:26
Alignment explanation
Indices: 13784382--13784434 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
13784372 CCGATCCGAT
* *
13784382 CTTAGACTGGGGATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13784408 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
13784434 C
1 C
13784435 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Done.