Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 90 of 190
Found at i:14331947 original size:922 final size:896
Alignment explanation
Indices: 14329304--14332398 Score: 3663
Period size: 922 Copynumber: 3.4 Consensus size: 896
14329294 GATCCAATCG
* * *
14329304 TAGACTGGGAATGAACTCCGTATGACTAAGCCAACCGACGAAACGAGCG-AGCGGGCGTGTGGGC
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTA-CGGGC------GC
* * * * * * *
14329368 GTTCAACCGGCCAGAAGGGTGGGATGCGCAAGCCTG-GGATC-GACAAGGTCCCCCTCTATGTGC
59 --TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC-GAGGATCGGTC-GGGTCCCTCTCTACGTGC
* * * * *
14329431 TGCCGTTCCTGCTATCGCAACCCTCAGTCTGGCCCAATCTTAGACTGGGAATGAACTCCGTATGC
120 TACCGATCCTACTACCGCAACCCTCAGTCTGACCCAATCTTAGACTGGGAATGAACTCCGTATGC
* * *
14329496 CTAAGCC-ATCCGACGAAACG--A--GCGGGCGGGCGGGCACTATGCCGGCCAGAGAAACAGGAT
185 CTAAGCCAAT-CGACGAAACGAAAGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * * *
14329556 GCGCATGTCGTGGATCGATAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTC-TAAGTGCC
249 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCA-TGCC
* *
14329620 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
313 AATGCCATTTTTATGGCTTGGAAATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATG
* * **
14329685 GCAAGACGACTAGTTTTCTATTTTTCATGATTT-TTGAAC-TTTTGCGGTTC-AGGATTTTTTAA
378 GCAAGACGACTCGTTTTCTATTTTTGATGATTTGTAAAACTTTTTGCGGTTCGA-GATTTTTTAA
* * *
14329747 AATTTTTTTGGAAGGATT---TTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGG
442 AATTTTTTTCGAAGG-TTGAGTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTTTTGG
* *
14329809 CATGCACAAAAAAATTCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
506 CATGCACCAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
14329874 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATCCACTTTAA
571 GTCCCCATTTCAGACACTTTAATGG-TACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
14329939 GGGGGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATGTAAGGGCCAAGTACCAGCAC
635 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * *
14330004 CCATCGCACATCATGTGC--ACATACCCCCTCGGCCCCCCGATCG-TCGAAACCCCAATGCCGCC
700 CCATCGCACATCATGTGCGTACA-CCCCCCT-GCCCCCCCGATCGCT-GGAACCCCAATGCCGCC
* * * *
14330066 GATCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATATGACACCATCACA
762 GGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGACACCAGCACA
*
14330131 TGCCCGACCCCAGCATGTGCTGCCGCAA-CC-C-TC-GGT-C---C-------G---G---TCCG
827 TG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGTCTGGTCCGATCTTAGATGGAATGAACTCCG
14330175 -AT-CT
891 TATGCT
* * *
14330179 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCT
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* * * * * * * *
14330244 GCTAGAGAGGCGGGATGCGCAAGCCGAAGATCGCTCGGGT-CCTCTCTACGTACT-GCGATCTTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCTCTCTACGTGCTACCGATCCTA
* * * * * *
14330307 CTGCTGCAACCCTTAGTCTGGCCCAATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAACC
131 CTACCGCAACCCTCAGTCTGACCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATC
** * * * *
14330372 GACGAAACGAGCGGGCAGGCGGGCGGGCGAGCACTATGTCGGCCAGAGAGACGGGATGCACAAGC
196 GACGAAACGA--AAG--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
*
14330437 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATT
257 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCATGCCAATGCCATT
14330502 TTTATGGCTTGGAAATTCATACAATGGT-ACTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
322 TTTATGGCTTGGAAATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
14330566 CTCATTTTCTATTTTTGATGATTTGTAAAACTTTTTGCGGTTTGAGATTTTTTAAAA-TTTTATC
387 CTCGTTTTCTATTTTTGATGATTTGTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTC
* *
14330630 GAAGG--GAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGGA-CAA
452 GAAGGTTGAG-TTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACCAA
* * * *
14330692 AAAAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAGAAAGTGTCCCAATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
14330757 CAGACACTTTAATGTCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATG-GTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
** * *
14330822 GTTCTCGAGGTTCAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGAACA
645 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
14330887 TCATGTGCGCGCT-CACCCCCCGGCCCTCCCGATCACCGGAACCCCAATGCTGCCAGTCAGGTTC
710 TCATGT--GCG-TACACCCCCCTGCCCCCCCGATCGCTGGAACCCCAATGCCGCCGGTCAGGTTC
* * * ** * * *
14330951 TCCGGTGATGGTCCAATTATGGTGCCCCGACGAAGAAAAATGCGGCACCTGCACATGCCAGAGCC
772 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGACACCAGCACATGCC-GAGCC
*
14331016 CATCATGTGCTGCCGCAACCCTCGATCTGGTCCGATCTTAGATTGGAAATGAACTCCGTATGCT
836 CAGCATGTGCTGCCGCAACCCTCG-TCTGGTCCGATCTTAGA-TGG-AATGAACTCCGTATGCT
*
14331080 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGTCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* *
14331145 GCCAGAGGGGCGGGATGCGCAAGCC-AGGGATCGGTCGGGTCCCTCTCTGCGTGCTACCAATCCT
66 GCCAGAGGGGCGGGATGCGCAAGCCGA-GGATCGGTCGGGTCCCTCTCTACGTGCTACCGATCCT
* ** * * *
14331209 ACTGCCGCAACCCTTGGTCTGACCCGATCTTAGACTGGGAATGAACTCCGTATGCCTTAGCTAAT
130 ACTACCGCAACCCTCAGTCTGACCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAT
*
14331274 CGATGAAACGAAAAGGGCGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
195 CGACGAAACG-AAAGGGC--G-GG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * *
14331339 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGACTCATCTTCATGTTCCTTCATGCGAATGCCA
255 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCATGCCAATGCCA
* * *
14331404 TTTTTTTATGGCTTGGAAA-TCTTACAATGAT-ACTTAAGCGTTCACATGTGAAGTTAGTTGCAT
320 --TTTTTATGGCTTGGAAATTCATACAATGGTCACTTAAGCCTTCAC--GTGAAG-T--TT-CAT
* *
14331467 GGCAAGACGACTCGTTTTCTATTTTTGACGATTTCGTAAAACTTTTTGC-GTGTCGAGA-CTTTT
377 GGCAAGACGACTCGTTTTCTATTTTTGATGATTT-GTAAAACTTTTTGCGGT-TCGAGATTTTTT
* * *
14331530 AAAATTTTTTTTGACGGTTGAGTTTGGGCCCCAAACATGGTAGACGTGCATCCGTTGAATTTTTT
440 AAAATTTTTTTCGAAGGTTGAGTTT-GGCCCCAAACATGGTAGACGTG-ATCC-TTGTA-TTTTT
*
14331595 TTTGGCATGCCACCAAAAAATTCAGCTAAAAACTCAAAGTGTAC-AGATTTTTGTGGACCCATTT
501 TTTGGCATG-CACCAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA-TTTTGT-GA-CCA-TT
*
14331659 TGAAAAAAGTGTCCCCATTTCAGA-ACTTTATTGGTACTGACAGCCAAAACCTGTAAAATCTCAA
561 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGTACTGACAG-C-AAACCTGTAAAATCTCAA
*
14331723 ATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
624 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
14331788 AGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCCTGACCCCCCCGATCGCTGGAACCCC
689 AGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCCTG-CCCCCCCGATCGCTGGAACCCC
* * *
14331853 AATGGCCGTCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCACGACGAAGAAAAATGTGA
753 AAT-GCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGA
* *
14331918 CACCAGCACATGCTCGAGCCTAGCATGTGCTGCCGCAACCTTCGGTCTGGTCCGATCTTAGACTG
817 CACCAGCACATGC-CGAGCCCAGCATGTGCTGCCGCAACCCTC-GTCTGGTCCGATCTTAGA-T-
*
14331983 GGAATGAACTCCATATGCT
878 GGAATGAACTCCGTATGCT
* ** * *
14332002 TAGACTGGGAAAGAACTCCGTATGCCTAAGAT-AACCCACGAATTGAGTGTACGGGCACTCAGCC
1 TAGACTGGGAATGAACTCCGTATGCCTAAG-TCAACCCACGAAACGAGCGTACGGGCGCTCAGCC
* * * * * * * *
14332066 GGCCAGAGGGGCGAGATTCACAAGCCGAGGATCCGTCGGATCCCTCTTTGCGTGCTATCGATCCT
65 GGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCTCTCTACGTGCTACCGATCCT
* * * ** *
14332131 ACTACTGCAACCCTC-GATTTCATACAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
130 ACTACCGCAACCCTCAG-TCTGACCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
14332195 -C--C--AACGAAAGGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCC
194 TCGACGAAACGAAAGG-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
14332255 GTGGATCGATAGGGTGGTAAGTGGGATTAGGCACATCTTAATATTT-TTGCATGCCAATGCCATT
258 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTT-CATGCCAATGCCATT
** * * * * *
14332319 TTTATTACTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGTAGTTTCATGGCAAGATGA
322 TTTATGGCTTGGAAATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
14332384 CTCGTTTTCTATTTT
387 CTCGTTTTCTATTTT
14332399 CCAGCATGTG
Statistics
Matches: 1903, Mismatches: 217, Indels: 168
0.83 0.09 0.07
Matches are distributed among these distances:
865 72 0.04
866 13 0.01
867 33 0.02
868 1 0.00
869 2 0.00
872 56 0.03
873 328 0.17
874 71 0.04
875 153 0.08
876 7 0.00
877 3 0.00
879 2 0.00
880 3 0.00
881 1 0.00
884 1 0.00
892 1 0.00
896 1 0.00
899 4 0.00
900 6 0.00
901 97 0.05
902 14 0.01
903 72 0.04
904 96 0.05
905 23 0.01
906 17 0.01
907 33 0.02
908 3 0.00
910 3 0.00
911 64 0.03
912 40 0.02
913 108 0.06
914 27 0.01
915 5 0.00
916 9 0.00
917 19 0.01
918 4 0.00
919 36 0.02
920 23 0.01
921 35 0.02
922 411 0.22
923 6 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (896 bp):
TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCTCTCTACGTGCTACCGATCCTA
CTACCGCAACCCTCAGTCTGACCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATC
GACGAAACGAAAGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCATGCCAATGCCATTTTTA
TGGCTTGGAAATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
TTTTCTATTTTTGATGATTTGTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTCGAAG
GTTGAGTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACCAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGTACACCCCCCTGCCCCCCCGATCGCTGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT
GCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGACACCAGCACATGCCGAGCCCAGCATGTGC
TGCCGCAACCCTCGTCTGGTCCGATCTTAGATGGAATGAACTCCGTATGCT
Found at i:14332010 original size:26 final size:26
Alignment explanation
Indices: 14331974--14332026 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14331964 CTGGTCCGAT
*
14331974 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAAAGAACTCCATATG
*
14332000 CTTAGACTGGGAAAGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCATATG
14332026 C
1 C
14332027 CTAAGATAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCATATG
Found at i:14332806 original size:462 final size:462
Alignment explanation
Indices: 14331939--14332860 Score: 1176
Period size: 462 Copynumber: 2.0 Consensus size: 462
14331929 GCTCGAGCCT
* * *
14331939 AGCATGTGCTGCCGCAACCTTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTA
1 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTA
** * *
14332004 GACTGGGAAAGAACTCCGTATGCCTAAGATAACCCACGAATTGAGTGTACGGGCACTCAGCCGGC
66 GACTGGGAAAGAACTCCGTATGCCTAAGATAACCCACGAAACGAGCGTACGGGCACTCAACCGGC
* * * ** *
14332069 CAGAGGGGCGAGATTCACAAGCCGAGGATCCGTCGGATCCCTCTTTGCGTGCTATCGATCCTACT
131 CAGAGGGGCGAGATGCACAAGCCGAGGATCAGTCGGATCCCCCGCTACGTGCTATCGATCCTACT
** * *
14332134 ACTGCAACCCTCGATTTCATACAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCAA
196 ACCACAACCCTCGATCTAATACAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCAA
* * * * * * * *
14332199 CGAAAGGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
261 CGAAACGAGCGGGCGAGCGGGCACTACGCTAGCCAAAGAAACGAGATACGCAAGCCGTGGATCAA
* * *
14332264 TAGGGTGGTAAGTGGGATTAGGCACATCTTAATATTTTTGCATGCCAATGCCATTTTTATTACTT
326 TAGGGTGGTAAGTGGGATTAGGCACATCTTAATATTTCTACATGCCAATGCCATTTTTATGACTT
* *
14332329 GTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGTAGTTTCATGGCAAGATGACTCGTTTTCT
391 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCT
14332394 ATTTTCC
456 ATTTTCC
* **
14332401 AGCATGTGCTATCC-CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCT
1 AGCATGTGCT-GCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCT
* * * * * *
14332465 AGA-TGGGGAATGAACTCTGTATGCCTAAG-TCAACCGATGAAACGAGCGTGCGGGCGCTCAACC
65 AGACT-GGGAAAGAACTCCGTATGCCTAAGAT-AACCCACGAAACGAGCGTACGGGCACTCAACC
* ** *
14332528 GGCCAGAGGGGC-AGGATGCGCAAGATG-GAGATCAGTC-GAGTCCCCCGCTACGTGCTGTCGAT
128 GGCCAGAGGGGCGA-GATGCACAAGCCGAG-GATCAGTCGGA-TCCCCCGCTACGTGCTATCGAT
* * * * * * *
14332590 CCTGCTGCCATAACCCTCGGTCTAATTCGATCTTAGACTGGGAGTGAAC-TCTGTATGCCTAAGC
190 CCTACTACCACAACCCTCGATCTAATACAATCTTAGACTGGGAATGAACTTC-GTATGCCTAAGC
** * *
14332654 CAACTGACGAAACGAGCGGGCGAGCGGGCACTA-GGTCAGCCAAAGAAACGAGATACGCAAGCTG
254 CAACCAACGAAACGAGCGGGCGAGCGGGCACTACGCT-AGCCAAAGAAACGAGATACGCAAGCCG
* * * * *
14332718 TGGATCAATAGGGTGGTAGGTGGGTTTAGGCATATCTTGATATTTCTACGTGCCAATGCCATTTT
318 TGGATCAATAGGGTGGTAAGTGGGATTAGGCACATCTTAATATTTCTACATGCCAATGCCATTTT
*
14332783 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
383 TATGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
14332848 CGTTTTCTATTTT
448 CGTTTTCTATTTT
14332861 TCACGATTTT
Statistics
Matches: 392, Mismatches: 60, Indels: 16
0.84 0.13 0.03
Matches are distributed among these distances:
461 10 0.03
462 380 0.97
463 2 0.01
ACGTcount: A:0.25, C:0.24, G:0.26, T:0.25
Consensus pattern (462 bp):
AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTA
GACTGGGAAAGAACTCCGTATGCCTAAGATAACCCACGAAACGAGCGTACGGGCACTCAACCGGC
CAGAGGGGCGAGATGCACAAGCCGAGGATCAGTCGGATCCCCCGCTACGTGCTATCGATCCTACT
ACCACAACCCTCGATCTAATACAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCAA
CGAAACGAGCGGGCGAGCGGGCACTACGCTAGCCAAAGAAACGAGATACGCAAGCCGTGGATCAA
TAGGGTGGTAAGTGGGATTAGGCACATCTTAATATTTCTACATGCCAATGCCATTTTTATGACTT
GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCT
ATTTTCC
Found at i:14333360 original size:26 final size:26
Alignment explanation
Indices: 14333331--14333381 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14333321 CGTCCGATCC
*
14333331 TAGACTGGGAATGAACACCGTATGCT
1 TAGACTGGGAATGAACACCATATGCT
*
14333357 TAGACTGGGAATGAACTCCATATGC
1 TAGACTGGGAATGAACACCATATGC
14333382 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.20, G:0.25, T:0.24
Consensus pattern (26 bp):
TAGACTGGGAATGAACACCATATGCT
Found at i:14334236 original size:26 final size:26
Alignment explanation
Indices: 14334207--14334259 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14334197 CTGGTCCGAT
*
14334207 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14334233 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14334259 C
1 C
14334260 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14334283 original size:879 final size:877
Alignment explanation
Indices: 14332399--14339704 Score: 6372
Period size: 873 Copynumber: 8.3 Consensus size: 877
14332389 TTTCTATTTT
* * *
14332399 CCAGCATGTGCTATCC-CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGC
1 CCAGCATGTGCT-GCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
14332463 CTAGA-TGGGGAATGAACTCTGTATGCCTAAGTCAACCGATGAAACGAGCGTGCGGGCGCTCAAC
65 TTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACC
** * * *
14332527 CGGCCAGAGGGGCAGGATGCGCAAGATG-GAGATCAGTCGAGTCCCCCGCTACGTGCTGTCGATC
129 CGGCCAGAGGGGC-GGATGCGCAAGCCGAG-GATCGGTCG-GTCCCCCTCTGCGTGCTGTCGATC
** * ** * *
14332591 CTGCTGCCATAACCCTCGGTCTAATTCGATCTTAGACTGGGAGTGAACTCTGTATGCCTAAGCCA
191 CTGCTGCCGCAACCCTCAGTCT-GGTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * ** * *
14332656 ACTGACGAAACGAGCGGGCGAGCGGGCACTAGGTCAGCCAAAGAAACGAGATACGCAAG-CTGTG
255 ACCGACGAAACGAGCGGGCGGGCGGG--C--GG-CGGGC--AG-AGC-A-CTACGCCGGCCAG-A
* * * * *
14332720 GATCAATAGGGTGGTAGGTGGGTTTAGGCATATCTTGATATTTCTACGTGCCAATGCCATTTTTA
309 GAT--A-CGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTA
*
14332785 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG
371 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * *
14332850 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTCAAAATTTTTTTGCAAG
436 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGGAAG
** *
14332915 GAGTTTTGGCCTTAAA-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
501 GAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * * *
14332979 AGCTAAAAACTCGAAGTGTACAAGATTTTTTGACCAATTGAAAATAGGGTCCCCATTTCAGACAC
566 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
14333044 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTATCG
631 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
14333109 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGGG
696 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * *
14333174 CGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCTG-CAGGTCAGGTACTCC-ACCGA
761 CGCACACCCCCC--CCCCCCCGATCGTCGGAACCCCAATGCCGTC-GATCAGGTTCTCCGA-CGA
* **
14333237 TGCT-CTAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCATGTGCCCGAGC
822 TGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* ** * * * * *
14333293 TCAGCATGTGCTATCGAAACCCTTGGTC-CGTCCGATCCTAGACTGGGAATGAACACCGTATGCT
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * *
14333357 TAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACG-AACGAGCGTGTGGGTGCTCACCCG
66 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCCG
* * * *
14333421 GCTAGAGGGGCGGAATGCGCAAGCCGAGGATCGGCCTGGTCCCTCTCTGCATGCTGTCGATCCTG
131 GCCAGAGGGGCGG-ATGCGCAAGCCGAGGATCGGTC-GGTCCCCCTCTGCGTGCTGTCGATCCTG
** * * *
14333486 CCACTGCAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACC
194 CTGCCGCAACCCTCAGTCTGG-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
*
14333551 GACGAAACGAGCGGGCAGGCGGGCGGCGGGCAG-GCACTACGCCGGCCAGAGATACGGGTGGCAG
258 GACGAAACGAGCGGGCGGGCGGGCGGCGGGCAGAGCACTACGCCGGCCAGAGATACGGGTGGCAG
* *
14333615 GTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
323 GTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * * * *
14333680 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAAGGGAAGGCGACTCATTTTCTATTTTTCATGA
388 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* ** * * * *
14333745 TTTTCGAAACTTTTTACAATTTGAGATTTTTTTAAATTTTTTTGGAACGATTTTTGGCCCCAAAC
453 TTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * * *
14333810 TTTGTAGACATGATCCCTGTATTTTTGTTAGCATGCACAAAAAATTTCAGCTAAAAACTCGTAGT
518 TTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* *
14333875 GTACAAGGTTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAATGGCTACTGGCA
583 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
14333940 GCAAACCTATAAAATCTCTAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
648 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
14334005 GGGGGCCAATATAAGGGCCAAGTACCAGCAGCCATCGCACATCATGTGCGCACACCCCCCACCCC
713 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCCCC
* * *
14334070 CCAATCGTCAGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTG
778 CCGATCGTCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
*
14334135 GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
843 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* *
14334170 CCAGCATGTGCTGCAGCAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCT
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * *
14334235 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGTGCTCAGCCG
66 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCCG
* * * * * *
14334300 ACCAGAGGGGCAAGATGCACAAGTCGAGGATCGGTCGGGT-ACCCTCTGCTTGCTGTCGATCCTG
131 GCCAGAGGGGC-GGATGCGCAAGCCGAGGATCGGTC-GGTCCCCCTCTGCGTGCTGTCGATCCTG
** ** ** * * *
14334364 CTATCGCAACAATTGGT-TCGGTCTGAACTTAGACTGGGAATGAACTCCATATGACTAAGCCAAC
194 CTGCCGCAACCCTCAGTCT-GGTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * **
14334428 CGGCGAAATGAGTGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGTGATGCGCAAGCCAT
257 CGACGAAACGAGCGGGCGGGCGGGC-GG-----CG--GG-CAGAG-CAC-T-A--CGCCGGCCA-
*
14334493 TGATCGATA-GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGA-GCCAATGCCATTT
307 -GA--GATACGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTAC-ATGCCAATGCCATTT
* **
14334556 TTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATATGAAGTTTCATGGCAAGACGAC
368 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * * * *
14334621 TTGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGA
433 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGG
* * * *
14334686 AAGGATTTTTGGCCCCAGACATGGTAGACACGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
498 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
14334751 TTCAGCTAAAAAATCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
563 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
14334816 CACTTTAATGGCTACTGGCAGAAAACCTGTAAAATCTCAAATGCTATTTAA-GGAGTGTGAGTTC
628 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
14334880 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATTGCACATCAT
693 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
14334945 GTGCGCACACCCCCCCGGCCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGG
758 GTGCGCACA--CCCCC--CCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCAGGTTCTCCGA
** * * *
14335010 CGATGCTCC-AGCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCAACC
819 CGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
14335069 CCAGCATGTGCTGCCGCAA-CC-C--TC--G---G-TC-----C--------AA-TCCG-AT-CT
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
*
14335108 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGTGCTCACCCG
66 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCCG
* * * ** * *
14335172 GCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTTTGTGCT-ACAGATCTT
131 GCCAGAGGGGC-GGATGCGCAAGCCGAGGATCGGTC-GGTCCCCCTCTGCGTGCTGTC-GATCCT
* *
14335236 GCTGCCACAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAAC
193 GCTGCCGCAACCCTCAGTCTGGTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * *
14335301 CGATGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAG-AGATGGGATGCCCAAGTCG
257 CGACGAAACGAGCGGGCGGGCGGGC-GG-----CG--GG-CAGAGCA-CT---ACG-CC--GGC-
** * * * ** **
14335365 TGGATCGATA-AGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTATGTGCCAATGCTTTTT
305 CAGA--GATACGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTT
*
14335429 TTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
368 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14335494 TTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGG-TTCAGGATTTTTTAAAATTTTTTCG
433 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGA-GATTTTTTAAAATTTTTTCG
* * *
14335558 GAAGGAGTTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAA
497 GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
14335623 CATT-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAGAAAAGTGTCCCCATTTCA
562 -ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
14335687 GACACTTTAATGGCTACTGGCACCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
626 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
14335751 TCTCGAGGTTTGATGAGGGATAGGGTGCCAATATAAGGGCTAAGTACCAGCCCCCATCACACATC
691 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
** * * *
14335816 ATGTGCGCACACCTGCCAGGCCCCCCCGATCGTCGGAACCCCAATACTGCCGGAT-AGGTTCTCC
756 ATGTGCGCACACC--CC-CCCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GATCAGGTTCTCC
* ** * * *
14335880 GACGATGCTCCGATGATGGTGCCTTGACGTAGAAAAATGCAGCACCAGAACATGCCCGAGC
817 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* ** * * * *
14335941 CCAGCATGTGCTACTACGACCTTCGGTCTGATCCGATCTTAGAATGGGAATGAA---C---T-C-
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * * *
14335998 T-G--T----ATG-CCT-C--A-GTC-AA--C-ACCAACGAAATGAGCGTGCGGGCGCTTAGCCG
66 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCCG
* * * * * * * * *
14336047 ACCAGAGGGGTAGGATGTGCAAGCTGAGGATCGGTCGAGTCCCCCTCTACATCCCGTCGATGCTG
131 GCCAGAGGGG-CGGATGCGCAAGCCGAGGATCGGTCG-GTCCCCCTCTGCGTGCTGTCGATCCTG
* ** * * *
14336112 CTGCCGTAACCCTCAGTCCAGTCTGATCTTAGACTCGAAATGAACTCTGTATGCC-AAGGCCAAC
194 CTGCCGCAACCCTCAGTCTGGTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAA-GCCAAC
* * * * * *
14336176 CCACGAAACGAGCGGGCGGGCGGGCTGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
257 CGACGAAACGAGCGGGCGGGCGGGC-GGCGGGCA-GA-G-C--AC-TA-CG-C-CG--GC-C-A-
* * * **
14336241 CTGTGGATCGATA-GGGTGGTAGGTAGGTTTAGGCACATCTTCGTATTTCTGGATGCCAATGCCA
307 -----GA--GATACGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
* *
14336305 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCATCACGTGAAGTTTAATGGCAAGAC
365 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** * * *
14336370 GACTCGTTTTCTATTTTTCATGATTTTCAAAAC-TTTTACAGTTCGGGATTTTTTAAAATTTTTT
430 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTT
* * * * *
14336434 CAGAAGGAGTTCTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGACATGCGA-AAA
495 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGC-ACAAA
* * * *
14336498 AAAA-TCAACTAAAAACTCGAAGAGTACAAGATTTTGTGACCATTTTGAAAAAAGTATCCCTATT
559 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA-TTTGAAAAAAGTGTCCCCATT
* * * * **
14336562 TCAAATACTTTAATGGCTACTGGCAGCAAAACCTGTAAAATCACAAACGCTCTTTAAGGGTATGT
623 TCAGACACTTTAATGGCTACTGGCAGC-AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
14336627 GAATTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAATGGCCAAGTACCAGCACCCATCACA
687 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * *
14336692 CATCATGTGCGCACACCCGCCCCGGCCCCCCCAATCGTCAGAACCCCAATGCCG-CCAGTCAGGT
752 CATCATGTGCGCACA-CC-CCCC--CCCCCCCGATCGTCGGAACCCCAATGCCGTCGA-TCAGGT
** *
14336756 TCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCAGG-ACCAGCACATGTCCGA
812 TCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC-GGCACCAGCACATGCCCGA
14336820 GC
876 GC
* * **
14336822 CCAGCATGTGCTGCCGCAACCCTTGGTCTGATCCGATCTTAGACTGGG-A--AACTCTATCATGC
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGT-ATGC
* *
14336884 TTAG-CT-GG-A-GCAC-CCGGTATGCCT-AGTCAA-CCACGAAA-GAGCCATGC-GGCGCGTCA
65 TTAGACTGGGAATGAACTCC-GTATGCCTAAGTCAACCCACGAAACGAG-CGTGCGGGCGC-TCA
** * * * *
14336940 GCTAGGCCAGA--TG-GGATGCCCACAGCCGA-GATCGGTCGGGT-TCCTTCTTGCGTGCTG-CG
127 -CCCGGCCAGAGGGGCGGATGCGCA-AGCCGAGGATCGGTC-GGTCCCCCTC-TGCGTGCTGTCG
* ** *
14336999 ATCCTGC--CC-CAACCCT-GGTAGGGCCGATCTTAGACT-GGAATGAACTCCG-ATG-CT-AGC
188 ATCCTGCTGCCGCAACCCTCAGTCTGGTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
14337056 CAAACCGATGAAATGAGC-GGCGGCGGCGAGCAGCGCACGCTCGCGTG-AGAG-ATCGATGCGCA
253 C-AACCGACGAAACGAGCGGGC-G-GGCG-G--GCG---G--CG-G-GCAGAGCA-C--TACGCC
* * * * * *
14337118 AGCACTTG-GGTTCGATGGTGGGTTAGG-GAGGTTTA--CACATC-TCATATTTCTACGTG-CAA
302 GGC-C-AGAGATACG--GGT-GG-CAGGTG-GGTTTAGGCACATCTTCATATTTCTACATGCCAA
* * * * *
14337177 TGCCAATTTT-T-G-TTG-ACATTTCATAATGCAATGG--CCTCAAGCCTTTATGTGAAG-TTCA
360 TGCCATTTTTATGGCTTGTA-AATTCAT-A--CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
** *
14337235 TGTGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGA-GGTTCGAGATTTTT
421 TG-GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT-ACGGTTTGAGATTTTT
* * *
14337299 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGATAGGCATGATCCTTGTATTTTTGGTTC
484 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTT-GTT-
* * *
14337364 GGCGATGCACAAAAAAATTCACCTAAAAACTCGATGTGTACAA-ATTTTGTGGCCATTTG--AAA
547 GGC-ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * * *
14337426 AGTG-CCCCATTTAAGACAC-TTAACGGCTATCAGGTAGCAAACCTGTAAAATCCTCAAATGCTC
611 AGTGTCCCCATTTCAGACACTTTAATGGCTA-CTGGCAGCAAACCTGTAAAAT-CTCAAATGCTC
** * *
14337489 -TTAAGGCCGTGTGAGTTCTCGAGG-TTAATGAGGGATA-GGGGCCAAT-TATGGG-CAA-TACC
674 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * * * * *
14337548 AGCA-CCATCGCACATTTCAT-TTCAGC-CA------CCTCGCCGGTCGTCGAAATCCCAGTG-C
739 AGCACCCATCGCACA--TCATGTGC-GCACACCCCCCCCCCCCCGATCGTCGGAACCCCAATGCC
*
14337603 GTC-AGTCAGG-T-T-C-ACG--G---C-A--A---TGCTCCGACGAAGAAAACAT-CGAGCA-C
801 GTCGA-TCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAA-ATGCG-GCACC
*
14337650 AGCACATGCCCTTAG-
863 AGCACATGCCC-GAGC
* *
14337665 CCAACATGTGCTGCCGCAACCCTTGGTCT-G---GATCTTAGACTGGGGAATGAACT-CGTATGC
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACT-GGGAATGAACTCCGTATGC
* * * ** *
14337725 TT-GA-TAGGAATGAACTCTGT-TGTCTAAGTCAACCCACGTAAACGA---TTTGGGCGTTCAGC
65 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG-AAACGAGCGTGCGGGCGCTCA-C
* * ** * * * * * * *
14337784 TCAG-CA-A-GGGC-GAT-CATAAGGCG-GG-T--GTCGATCGTCGCTTTGCATGCTGCCGATCC
128 CCGGCCAGAGGGGCGGATGCGCAAGCCGAGGATCGGTCGGTC-CCCCTCTGCGTGCTGTCGATCC
* *
14337840 TGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAA
192 TGCTGCCGCAACCCTCAGTCTGGT-CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14337905 CTGACGAAATGAACGTGCGGGCAGGCGGATG-GGCACTACGCCGGCCAGAGAGACGGGATGCGCA
256 CCGACG--A--AACGAGCGGGCGGGCGG--GCGG-----CG--GG-CAGAG-CAC----TACGCC
* * * **
14337969 AGCCGTGGATCGATA-GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGC
302 GGCC--AGA--GATACGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
* *
14338033 GA-TTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
363 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * * *
14338097 ACGACTCGTTTTCTATTTTTCATGATTTTAGAAACATTTTGCGGTTAGGGATTTTTTAAAATTTT
428 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTT
* *
14338162 TTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
493 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAC-A
* * * *
14338227 AAAAAATTCAGCTTAAAACTCAAAGTGTACAAGTTTTTTGTGACCATTTGAAAAAAATGTCCCCA
557 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAG-ATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
14338292 TTTTAGACACTTTAATGGCTACTGGCAGCAAAACTATAAAATCTCAAATGCTCTTTAAGGGGGTG
621 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * * *
14338357 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATACGGGCCAAGTACTAGCACCCATCAC
686 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * *
14338422 ACATCATGTGCGCACACCCCCCGGCCCCCCCAATCGCCGGAACCCCAATGCCGCCGGTCAAGTTC
751 ACATCATGTGCGCACACCCCCC--CCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCAGGTTC
** *
14338487 T-CGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGC
814 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * *
14338550 CCAGCATGTGCTGCCGCAACCCTTGGTCCGGTCTGATCCTAGACTGGGATTGAACTCCGTATGCT
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * *
14338615 TA-ATTGGGAATGAACTCCATATGTCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGCCG
66 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCCG
* * * * *
14338679 GCCAGAGGGGCGAGATGCGTAAGCCGGGGATCGGCTGGGTCTCCCTCTTCGTGCTGTCGATCCTG
131 GCCAGAGGGGCG-GATGCGCAAGCCGAGGATCGG-TCGGTCCCCCTCTGCGTGCTGTCGATCCTG
* * * **
14338744 CTTCCACAACACTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
194 CTGCCGCAACCCTCAGTCTGGTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * *** * * * * **
14338809 GATGAAACAAACCTGACCCGGAGCGGGGCCTACGTCGGCCAGAGAGACGGGATGCGCAAGCACAT
258 GACG----AAA-C-GA-GCGG-GC-GGGCGGGCGGCGGGCAGAG-CAC----TACGCCGGC-CA-
** * * * *
14338874 G-GAT-CGATATGGTATGGTAGGTATT--GC-CA-CTT-ATA-TTCTGCATGCTAATGCCA-TTT
307 GAGATACG-GGTGGCA-GGTGGGT-TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTT
** * * * *
14338930 TA-ACCTTGCAAAATTCAT-CAATGGTCCTTAATAAGCCTTCACGTGAAGTTT-GT-GCCAGACG
369 TATGGCTTG-TAAATTCATACAATGGTCCCT--TAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* **
14338991 AC-CATTTTTCTATTTTTCACGATTTTTGAAACTCTTTT-CGGTTCTGAGAATTTTCAAAAATTT
431 ACTC-GTTTTCTATTTTTCACGATTTTTGAAACT-TTTTACGGTT-TGAG-ATTTTTTAAAATTT
*
14339054 ATCTCTC-GAAGGAGTTTTGGCCCCAAACTTGGT-G--ATGTATCCTTGT-TTTTTGTTGCCTAT
492 -T-T-TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATG-ATCCTTGTATTTTTGTTGGC-AT
*
14339114 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG-TTTTGTGACCATTTGAAAAAAGT-AC
552 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
** *
14339177 CCCA-TAAAGACA-TTTAATGGCTACTGGC-GCAAACCTGTAAAATCTCAAATGCTCTTTAA--T
617 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
14339237 GG-GTGAGTTCTCCA--TTTGATGA-GGATAGGGGG-C-TTATAA--G--AAGTACCAGCACCTA
682 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * ** * * * * *
14339292 TTTCAG-AAAT-AGGTGTGCACACCCCTGGCCCCCTCGACCATCGAAACCCCAATGCCGTCGGTC
747 --TC-GCACATCATGTGCGCACACCCC-CCCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATC
* *
14339355 AGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
808 AGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
14339420 CGAGC
873 CGAGC
* * * * * *
14339425 CCAGCATATGCTGCTGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCATATGCT
1 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* ** * **
14339490 TAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAATAAACGTGCGGGCGCTCAGCAT
66 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA-CCC
* * * *
14339555 GGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGTCGAGTCCCCCTTTGCGTGCTGTCGATCCT
130 GGCCAGAGGGG-CGGATGCGCAAGCCGAGGATCGGTCG-GTCCCCCTCTGCGTGCTGTCGATCCT
* * *
14339620 GCTGCCGCAACCCTCATTCTGGTTCGATCTT--A----G-ATGAACTCCATACGCCTAAGCCAAC
193 GCTGCCGCAACCCTCAGTCTGG-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* *
14339678 TGACGAAAAGAGCGGGCGGGCGGGCGG
257 CGACGAAACGAGCGGGCGGGCGGGCGG
14339705 GAGTGCGGGC
Statistics
Matches: 5312, Mismatches: 747, Indels: 739
0.78 0.11 0.11
Matches are distributed among these distances:
835 2 0.00
836 11 0.00
837 12 0.00
838 1 0.00
839 18 0.00
840 15 0.00
841 19 0.00
842 26 0.00
843 88 0.02
844 14 0.00
845 11 0.00
846 10 0.00
847 5 0.00
848 9 0.00
849 17 0.00
850 8 0.00
851 28 0.01
852 57 0.01
853 12 0.00
854 145 0.03
855 16 0.00
856 19 0.00
857 54 0.01
858 30 0.01
859 27 0.01
860 5 0.00
861 15 0.00
862 13 0.00
863 12 0.00
864 2 0.00
866 3 0.00
867 2 0.00
868 12 0.00
869 13 0.00
870 57 0.01
871 19 0.00
872 155 0.03
873 598 0.11
874 134 0.03
875 350 0.07
876 145 0.03
877 247 0.05
878 498 0.09
879 500 0.09
880 121 0.02
881 156 0.03
882 9 0.00
883 15 0.00
884 17 0.00
885 76 0.01
886 40 0.01
887 36 0.01
888 33 0.01
889 39 0.01
890 54 0.01
891 80 0.02
892 226 0.04
893 152 0.03
894 53 0.01
895 135 0.03
896 345 0.06
897 34 0.01
898 42 0.01
899 114 0.02
900 1 0.00
901 3 0.00
902 80 0.02
903 5 0.00
904 3 0.00
905 3 0.00
906 3 0.00
907 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (877 bp):
CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCACCCG
GCCAGAGGGGCGGATGCGCAAGCCGAGGATCGGTCGGTCCCCCTCTGCGTGCTGTCGATCCTGCT
GCCGCAACCCTCAGTCTGGTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
GAAACGAGCGGGCGGGCGGGCGGCGGGCAGAGCACTACGCCGGCCAGAGATACGGGTGGCAGGTG
GGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
TTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
GTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCCCCCCG
ATCGTCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACG
AAGAAAAATGCGGCACCAGCACATGCCCGAGC
Found at i:14339411 original size:875 final size:895
Alignment explanation
Indices: 14335978--14339635 Score: 2687
Period size: 875 Copynumber: 4.2 Consensus size: 895
14335968 CTGATCCGAT
* ** * * ** * *
14335978 CTTAGAATGGGAATGAACTCTGTATGCCTCAGTCAACACCAACGAAATGAGCGTGCGGGCGCTTA
1 CTTAGACTGGGAATGAACTCCATATACCTAAGTC-A-ACCAACGAAACAAACGTGCGGGCGCTCA
* * ** * * * * * * *
14336043 GC-CGACCAGAGGGG-TAGGATGTGCAAGCTGAGGATCGGTCGAGTCCCCCTCTACATCCCGTCG
64 GCACGGCCAGAGGGGCGA-GATGCACAAGCCGGGGATCGGTCGAGTCCCCCTTTGCGTGCTGTCG
* ** * ** * * *
14336106 ATGCTGCTGCCGTAACCCTCAGTCCAGTCTGATCTTAGACTCGAAATGAACTCTGTATGCC-AAG
128 ATCCTGCTGCCACAACACTCAGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAA-
* * * * ** * * *
14336170 GCCAACCCACGAAACGAGCGGGCGGGCGGGCTGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
192 ACCAACCGACGAAACAAACCTGCCGGCAGGC-GGAGGGCACTACGCCGGCCAGAGAGACGGGATG
** * **
14336235 CGCAAGCTGTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCGTATTTCTGGATGCCAA
256 CGCAAGCCATGGATCGATA--GTGGTAGGTAGGTTTA-GCACATCTTCATATTTCTACATGCCAA
** * * * *
14336300 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCATCACGTGAAGTTTAATGGC
318 TGCCA-TTTTATACCTTGAAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * * * **
14336365 AAGACGACTCGTTTTCTATTTTTCATGATTTTCA-AAAC-TTTTACAGTTCGGGATTTTTTAAAA
382 AAGACGACTCGTTTTCTATTTTTCACGATTTT-AGAAACATTTTGCGGTTAGGAATTTTCAAAAA
* * * *
14336428 TTTTTTCAGAAGGAGTTCTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGACATGC
446 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGCCATGC
* * * * * * *
14336493 -GAAAAAAAA-TCAACTAAAAACTCGAAGAGTACAAGATTTTGTGACCATTTTGAAAAAAGTATC
511 ACAAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGTTTTTGTGACCA-TTTGAAAAAAATGTC
* * * * * *
14336556 CCTATTTCAA-ATACTTTAATGGCTACTGGCAGCAAAACCTGTAAAATCACAAACGCTCTTTAAG
575 CCCA-TTAAAGACACTTTAATGGCTACTGGCAGCAAAA-CTATAAAATCTCAAATGCTCTTTAAG
* * * *
14336620 GGTATGTGAATTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA-ATGGCCAAGTACCAGCAC
638 GG-GTGTGAGTTCTCCA-GTTTGATGAGGGATAGGGGACCAATATACA--G-CAAGTACCAGCAC
* * * **
14336684 CCATCACACATCATGTGCGCACACCCGCCCCGGCCCCCCCAATCGTC-AGAACCCCAATGCCGCC
698 CCATCACAAATCAGGTGCGCACA-CC-CCCCGGCCCCCCCAACCACCGA-AACCCCAATGCCGCC
* * **
14336748 AGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCAGG-ACCAGCAC
760 GGTCAAGTTCT-CGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC-GGCACCAGCAC
* * * * * *
14336812 ATGTCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCTGATCCGATCTTAGACTGGG-A--AAC
823 ATGCCCGAGCCCAGCATATGCTGCCGCAACCCTCGGTCCGATCCAATCCTAGACTGGGAATGAAC
*
14336874 TCTATCATG
888 TCCAT-ATG
* * * * ** *
14336883 CTTAG-CT-GG-A-GCAC-CCGGTATGCCT-AGTCAACC-ACGAAAGAGCCATGC-GGCGCGTCA
1 CTTAGACTGGGAATGAACTCC-ATATACCTAAGTCAACCAACGAAACAAACGTGCGGGCGC-TCA
* * * * * *
14336940 GCTA-GGCCAGA--TG-G-GATGCCCACAGCC-GAGATCGGTCGGGT-TCCTTCTTGCGTGCTG-
64 GC-ACGGCCAGAGGGGCGAGATGCACA-AGCCGGGGATCGGTCGAGTCCCCCT-TTGCGTGCTGT
* * * *
14336997 CGATCCTGC--CC-CAACCCT-GGT--AGGGCCGATCTTAGACT-GGAATGAACTCCG-ATG-CT
126 CGATCCTGCTGCCACAACACTCAGTCCA-GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCT
* * ** * * * * **
14337053 -AGCCAAACCGATGAAA-TGAGC-GGCGGC-GGC-GAGCAGCGC-ACGCTC-GCGTGAGAGATC-
190 AAACC-AACCGACGAAACAAACCTGCCGGCAGGCGGAG-GGCACTACGC-CGGCCAGAGAGA-CG
* * * * *
14337110 -GATGCGCAAGCACTTGGGTTCGATGGTGGGTTAGGGAGGTTTA-CACATC-TCATATTTCTACG
251 GGATGCGCAAGC-CAT-GGATCGATAGT-GG-TAGGTAGGTTTAGCACATCTTCATATTTCTACA
* * * * * *
14337172 TG-CAATGCCAATTTT-T--GTTGACATTTCATAATGCAATGG-C-CTCAAGCCTTTATGTGAAG
312 TGCCAATGCC-ATTTTATACCTTGAAAATTCAT-A--CAATGGTCTCTTAAGCCTTCACGTGAAG
* * *
14337231 -TTCATGTGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA-AAACTTTTTGAGGTT-CGAG
373 TTTCATG-GCAAGACGACTCGTTTTCTATTTTTCACGATTTT-AGAAACATTTTGCGGTTAGGA-
** * * * *
14337293 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGATAGGCATGATCCTTGTATTTT
435 ATTTTCAAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * * *
14337358 TGGTTCGGCGATGCAC-AAAAAAATTCACCTAAAAACTCGATGTGTACAA-ATTTTGTGGCCATT
500 T-GTT--GCCATGCACAAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGTTTTTGTGACCATT
* * * * * * *
14337421 TG--AAAAGTG-CCCCATTTAAGACAC-TTAACGGCTATCAGGTAGCAAACCTGTAAAATCCTCA
562 TGAAAAAAATGTCCCCATTAAAGACACTTTAATGGCTA-CTGGCAGCAAAACTATAAAAT-CTCA
* * * * **
14337482 AATGCTC-TTAAGGCCGTGTGAGTTCTCGAGGTTAATGAGGGATAGGGG-CCAAT-TATGGGCAA
625 AATGCTCTTTAAGG-GGTGTGAGTTCTCCAGTTTGATGAGGGATAGGGGACCAATATA-CAGCAA
** * * * * ** *
14337544 -TACCAGCA-CCATCGCACATTTCA-TTTCAGC-CACCTCGCCGG---------TCGTCGAAATC
688 GTACCAGCACCCAT--CACAAATCAGGTGC-GCACACC-CCCCGGCCCCCCCAACCACCGAAACC
* * * * *
14337596 CCAGTG-CGTCAGTC-AGGT-TC-ACG--G---C-A--A---TGCTCCGACGAAGAAAACAT-CG
749 CCAATGCCGCCGGTCAAGTTCTCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAA-ATGCG
* * * * *
14337645 AGCA-CAGCACATGCCCTTAG-CCAACATGTGCTGCCGCAACCCTTGGTCTGGAT-C--T--TAG
813 -GCACCAGCACATGCCC-GAGCCCAGCATATGCTGCCGCAACCCTCGGTC-CGATCCAATCCTAG
*
14337703 ACTGGGGAATGAACT-CGTATG
875 ACT-GGGAATGAACTCCATATG
* ** ** * * ** *
14337724 CTT-GA-TAGGAATGAACTCTGT-TGTCTAAGTCAACCCACG---TAAACGATTTGGGCGTTCAG
1 CTTAGACTGGGAATGAACTCCATATACCTAAGTCAACCAACGAAACAAACG-TGCGGGCGCTCAG
* * * * * * * *
14337783 CTCAG-CA-A-GGGC--GAT-CATAAGGC-GGG-T--GTCGA-TCGTCGCTTTGCATGCTGCCGA
65 CACGGCCAGAGGGGCGAGATGCACAAGCCGGGGATCGGTCGAGTC-CCCCTTTGCGTGCTGTCGA
* * **
14337837 TCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAAC
129 TCCTGCTGCCACAACACTCAGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAAC
* ** * *
14337902 CAACTGACGAAATGAACGTGCGGGCAGGCGGATGGGCACTACGCCGGCCAGAGAGACGGGATGCG
194 CAACCGACGAAACAAACCTGCCGGCAGGCGGA-GGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * **
14337967 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATG
258 CAAGCCATGGATCGATA--GTGGTAGGTAGGTTTA-GCACATCTTCATATTTCTACATGCCAATG
* ** *
14338032 CGATTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
320 CCATTTTATACCTTGAAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * **
14338097 ACGACTCGTTTTCTATTTTTCATGATTTTAGAAACATTTTGCGGTTAGGGATTTTTTAAAATTTT
385 ACGACTCGTTTTCTATTTTTCACGATTTTAGAAACATTTTGCGGTTAGGAATTTTCAAAAATTTT
* *
14338162 TTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
450 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAA
*
14338227 AAAAAATTCAGCTTAAAACTCAAAGTGTACAAGTTTTTTGTGACCATTTGAAAAAAATGTCCCCA
515 AAAAAATTCAGCTAAAAACTCAAAGTGTACAAG-TTTTTGTGACCATTTGAAAAAAATGTCCCCA
**
14338292 TTTTAGACACTTTAATGGCTACTGGCAGCAAAACTATAAAATCTCAAATGCTCTTTAAGGGGGTG
579 TTAAAGACACTTTAATGGCTACTGGCAGCAAAACTATAAAATCTCAAATGCTCTTTAA-GGGGTG
* * *
14338357 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATACGGGCCAAGTACTAGCACCCATCAC
643 TGAGTTCTCCA-GTTTGATGAGGGATAGGGGACCAATATAC-AG-CAAGTACCAGCACCCATCAC
* * * * *
14338422 ACATCATGTGCGCACACCCCCCGGCCCCCCCAATCGCCGGAACCCCAATGCCGCCGGTCAAGTTC
705 AAATCAGGTGCGCACACCCCCCGGCCCCCCCAACCACCGAAACCCCAATGCCGCCGGTCAAGTTC
** *
14338487 TCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCC
770 TCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * ** * *
14338552 AGCATGTGCTGCCGCAACCCTTGGTCCGGTCTGATCCTAGACTGGGATTGAACTCCGTATG
835 AGCATATGCTGCCGCAACCCTCGGTCCGATCCAATCCTAGACTGGGAATGAACTCCATATG
* ** * *
14338613 CTTA-ATTGGGAATGAACTCCATATGTCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCATATACCTAAGTCAACCAACGAAACAAACGTGCGGGCGCTCAGC
** * *
14338677 -CGGCCAGAGGGGCGAGATGCGTAAGCCGGGGATCGG-CTGGGTCTCCCTCTT-CGTGCTGTCGA
66 ACGGCCAGAGGGGCGAGATGCACAAGCCGGGGATCGGTC-GAGTCCCCCT-TTGCGTGCTGTCGA
* ** *
14338739 TCCTGCTTCCACAACACTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
129 TCCTGCTGCCACAACACTCAGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAAC
* *
14338804 CAACCGATGAAACAAACCTGACCCGG-A-GC-G-GGGC-CTACGTCGGCCAGAGAGACGGGATGC
194 CAACCGACGAAACAAACCTG--CCGGCAGGCGGAGGGCACTACGCCGGCCAGAGAGACGGGATGC
* *
14338864 GCAAGCACATGGATCGATA-TGGTATGGTAGGTATT-GC-CA-CTT-ATA-TTCTGCATGCTAAT
257 GCAAGC-CATGGATCGATAGTGGTA-GGTAGGT-TTAGCACATCTTCATATTTCTACATGCCAAT
*
14338923 GCCATTTTA-ACCTTGCAAAATTCAT-CAATGGTC-CTTAATAAGCCTTCACGTGAAGTTT-GT-
319 GCCATTTTATACCTTG-AAAATTCATACAATGGTCTC-T--TAAGCCTTCACGTGAAGTTTCATG
* * * * *
14338983 GCCAGACGAC-CATTTTTCTATTTTTCACGATTTTTGAAAC-TCTTTTCGGTTCTGAGAATTTTC
380 GCAAGACGACTC-GTTTTCTATTTTTCACGATTTTAGAAACAT-TTTGCGGTT-AG-GAATTTTC
*
14339046 AAAAATTTATCTCTC-GAAGGAGTTTTGGCCCCAAACTTGGT-GATGT-ATCCTTGT-TTTTTGT
441 AAAAATTT-T-T-TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
*
14339107 TGCCTATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG-TTTTGTGACCATTTG-AA
503 TGCC-ATGCACAAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGTTTTTGTGACCATTTGAAA
* *
14339169 AAAA-GTACCCCA-TAAAGACA-TTTAATGGCTACTGGC-GCAAACCTGTAAAATCTCAAATGCT
567 AAAATGT-CCCCATTAAAGACACTTTAATGGCTACTGGCAGCAAAACTATAAAATCTCAAATGCT
* * *
14339230 CTTTAA-TGG-GTGAGTTCTCCA-TTTGATGA-GGATAGGGG-GC-TTATA-AG-AAGTACCAGC
631 CTTTAAGGGGTGTGAGTTCTCCAGTTTGATGAGGGATAGGGGACCAATATACAGCAAGTACCAGC
* * * * * * * *
14339287 ACCTATTTCAGAAAT-AGGTGTGCACA-CCCCTGGCCCCCTCGACCATCGAAACCCCAATGCCGT
696 ACCCA--TCACAAATCAGGTGCGCACACCCCCCGGCCCCCCCAACCACCGAAACCCCAATGCCGC
* *
14339350 CGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
759 CGGTCAAGTTCTC-GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* *
14339415 ATGCCCGAGCCCAGCATATGCTGCTGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAAC
823 ATGCCCGAGCCCAGCATATGCTGCCGCAACCCTCGGTCCGATCCAATCCTAGACTGGGAATGAAC
14339480 TCCATATG
888 TCCATATG
* * *
14339488 CTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAATAAACGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCATATACCTAAGTCAACCAACGAAACAAACGTGCGGGCGCTCAGC
* * *
14339553 ATGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGTCGAGTCCCCCTTTGCGTGCTGTCGATC
66 ACGGCCAGAGGGGCGAGATGCACAAGCCGGGGATCGGTCGAGTCCCCCTTTGCGTGCTGTCGATC
* *
14339618 CTGCTGCCGCAACCCTCA
131 CTGCTGCCACAACACTCA
14339636 TTCTGGTTCG
Statistics
Matches: 2229, Mismatches: 334, Indels: 408
0.75 0.11 0.14
Matches are distributed among these distances:
835 1 0.00
836 13 0.01
837 12 0.01
838 1 0.00
839 13 0.01
840 15 0.01
841 20 0.01
842 27 0.01
843 89 0.04
844 15 0.01
845 11 0.00
846 5 0.00
847 4 0.00
848 4 0.00
849 25 0.01
850 17 0.01
851 26 0.01
852 55 0.02
853 12 0.01
854 141 0.06
855 17 0.01
856 18 0.01
857 51 0.02
858 35 0.02
859 18 0.01
860 5 0.00
861 17 0.01
862 13 0.01
863 4 0.00
868 11 0.00
869 12 0.01
870 25 0.01
871 9 0.00
872 8 0.00
873 19 0.01
874 111 0.05
875 205 0.09
876 138 0.06
877 87 0.04
878 21 0.01
879 44 0.02
880 49 0.02
881 31 0.01
882 4 0.00
883 15 0.01
884 14 0.01
885 65 0.03
886 32 0.01
887 29 0.01
888 31 0.01
889 29 0.01
890 37 0.02
891 74 0.03
892 72 0.03
893 74 0.03
894 34 0.02
895 35 0.02
896 15 0.01
897 23 0.01
898 48 0.02
899 19 0.01
900 6 0.00
901 13 0.01
902 90 0.04
903 7 0.00
904 4 0.00
905 5 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (895 bp):
CTTAGACTGGGAATGAACTCCATATACCTAAGTCAACCAACGAAACAAACGTGCGGGCGCTCAGC
ACGGCCAGAGGGGCGAGATGCACAAGCCGGGGATCGGTCGAGTCCCCCTTTGCGTGCTGTCGATC
CTGCTGCCACAACACTCAGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCA
ACCGACGAAACAAACCTGCCGGCAGGCGGAGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
GCCATGGATCGATAGTGGTAGGTAGGTTTAGCACATCTTCATATTTCTACATGCCAATGCCATTT
TATACCTTGAAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTAGAAACATTTTGCGGTTAGGAATTTTCAAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAAAAA
TTCAGCTAAAAACTCAAAGTGTACAAGTTTTTGTGACCATTTGAAAAAAATGTCCCCATTAAAGA
CACTTTAATGGCTACTGGCAGCAAAACTATAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCT
CCAGTTTGATGAGGGATAGGGGACCAATATACAGCAAGTACCAGCACCCATCACAAATCAGGTGC
GCACACCCCCCGGCCCCCCCAACCACCGAAACCCCAATGCCGCCGGTCAAGTTCTCGACGATGCT
CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATATGCTG
CCGCAACCCTCGGTCCGATCCAATCCTAGACTGGGAATGAACTCCATATG
Found at i:14341300 original size:26 final size:26
Alignment explanation
Indices: 14341264--14341316 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14341254 GTTGACTTAG
14341264 GCATATGGAGTTCATTCCCAGCCTAA
1 GCATATGGAGTTCATTCCCAGCCTAA
*
14341290 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGCCTAA
14341316 G
1 G
14341317 ATCAGATGGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGCCTAA
Found at i:14342019 original size:25 final size:25
Alignment explanation
Indices: 14341985--14342032 Score: 87
Period size: 25 Copynumber: 1.9 Consensus size: 25
14341975 TTAGGCATAC
*
14341985 GGAGTTCATTCCCAGTCTAAGATCG
1 GGAGTTCATTCCAAGTCTAAGATCG
14342010 GGAGTTCATTCCAAGTCTAAGAT
1 GGAGTTCATTCCAAGTCTAAGAT
14342033 TGGACCATAC
Statistics
Matches: 22, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
25 22 1.00
ACGTcount: A:0.27, C:0.21, G:0.23, T:0.29
Consensus pattern (25 bp):
GGAGTTCATTCCAAGTCTAAGATCG
Found at i:14342897 original size:26 final size:26
Alignment explanation
Indices: 14342868--14342920 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14342858 GTTGACTTAG
* *
14342868 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14342894 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14342920 G
1 G
14342921 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:14344098 original size:492 final size:496
Alignment explanation
Indices: 14343167--14344134 Score: 1491
Period size: 492 Copynumber: 2.0 Consensus size: 496
14343157 CCCTTAAAGA
*
14343167 GCATTTGAGATTTTACAGGTTTGCTACCAGCAGCCATTAAAATGTCTGAAATGAGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTACCAGCAGCCATTAAAATGTCTAAAATGAGGACACTTTTT
*
14343232 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTTTGCATGCCAACAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATGCCAACAA
* * * *
14343297 AAATACAAAGATCATGTTTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAATTTTAAAAAATG
131 AAATACAAAGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATC
* * ** *
14343362 CCGAGCCACAAAAAGTTTGGAAAATCATGAAAAATAAAAAACGAGTCGTCCTGCCATTAAACTTC
196 CCCAACCACAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCCTGCCATGAAACTTC
* *
14343427 ATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAA
261 ATGTGAAGGCTTAAAGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
* *
14343492 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTCACGGCTTACGCATCCCGTCTCTC
326 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTATC
*** * * ***
14343557 TGGCTGGCATAGTGCCCTCCTGCCTACCCGTGTGCTCATTTCATCGGTTGGCTTAGGCATACAGA
391 TGGCCAACATAGTGCCCGCCCGCCTACCCGCCCGCTCATTTCATCGGTTGGCTTAGGCATACAGA
14343622 GTTCAATCCCAGTCTAAGATCAGACCATACCGAGGGTTGTG
456 GTTCAATCCCAGTCTAAGATCAGACCATACCGAGGGTTGTG
* * *
14343663 GCATTTGAGATTTTACAGGTTTGC-AGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTT
1 GCATTTGAGATTTTACAGGTTTGCTA-CCAGCAGCCATTAAAATGTCTAAAATGAGGACACTTTT
*
14343727 TTCAAATGGTCACAAAAT-TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-A
65 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATGCCAACA
* *
14343790 AAAATACGAGGATCACGTCTACCAAGTTTGGGGCCAAAACGT-CTTTCGAAAAAA-TTTAAAAAA
130 AAAATACAAAGATCACGTCTACCAAGTTTGGGGCCAAAAC-TCCTTTCGAAAAAATTTTAAAAAA
* * * *
14343853 TCCCCAACCTCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC-
194 TCCCCAACCACAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCCTGCCATGAAACT
*
14343917 TCATGTGAAGGCTTAAGGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
259 TCATGTGAAGGCTTAAAGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
*
14343982 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTA
324 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTA
* * * *
14344047 TCTGGCCAACGTAGTGCCCGCCCGCC-AGCCCGCCCGTTCGTTTCGTCGGTTGGCTTAGGCATAC
389 TCTGGCCAACATAGTGCCCGCCCGCCTA-CCCGCCCGCTCATTTCATCGGTTGGCTTAGGCATAC
* *
14344111 GGAGTTCATTCCCAGTCTAAGATC
453 AGAGTTCAATCCCAGTCTAAGATC
14344135 GGATGAGACT
Statistics
Matches: 428, Mismatches: 41, Indels: 10
0.89 0.09 0.02
Matches are distributed among these distances:
491 1 0.00
492 196 0.46
493 63 0.15
494 48 0.11
495 44 0.10
496 76 0.18
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.27
Consensus pattern (496 bp):
GCATTTGAGATTTTACAGGTTTGCTACCAGCAGCCATTAAAATGTCTAAAATGAGGACACTTTTT
TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATGCCAACAA
AAATACAAAGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATC
CCCAACCACAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCCTGCCATGAAACTTC
ATGTGAAGGCTTAAAGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTATC
TGGCCAACATAGTGCCCGCCCGCCTACCCGCCCGCTCATTTCATCGGTTGGCTTAGGCATACAGA
GTTCAATCCCAGTCTAAGATCAGACCATACCGAGGGTTGTG
Found at i:14344302 original size:26 final size:26
Alignment explanation
Indices: 14344262--14344314 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14344252 GTTGACTTAG
14344262 GCATACGGAGATCATTCCCAGTCTAA
1 GCATACGGAGATCATTCCCAGTCTAA
*
14344288 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGATCATTCCCAGTCTAA
14344314 G
1 G
14344315 ATCGGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGGAGATCATTCCCAGTCTAA
Found at i:14345165 original size:26 final size:26
Alignment explanation
Indices: 14345135--14345190 Score: 112
Period size: 26 Copynumber: 2.2 Consensus size: 26
14345125 TGGGTTGACT
14345135 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
14345161 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
14345187 TAAG
1 TAAG
14345191 ATCGGACCAG
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 30 1.00
ACGTcount: A:0.29, C:0.25, G:0.20, T:0.27
Consensus pattern (26 bp):
TAAGCATACGGAGTTCATTCCCAGTC
Found at i:14346067 original size:26 final size:26
Alignment explanation
Indices: 14346031--14346083 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14346021 GTTGACTTAG
*
14346031 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
* *
14346057 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
14346083 G
1 G
14346084 ATTGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:14346833 original size:899 final size:897
Alignment explanation
Indices: 14345097--14350387 Score: 6102
Period size: 904 Copynumber: 6.0 Consensus size: 897
14345087 CGATCGATCT
* *
14345097 CCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAAGCATACGGAGTTCATTCCCAGTCT
1 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * *
14345162 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGATTG-TG-ATGGCACATAC
66 AAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCA--GCACATGC
* * * *
14345225 TGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTTGTTGGGGCACCATC-GCTGGAGCATCG-C
129 TGGGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCATC-GGAGCATCGTC
*
14345288 AGGAGAACCT-AACGGCGGCATTGGGGTTCCGACGATC-GGGGGGTC-GGGGG-GTGCGCACATG
193 -GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGTGTGCGCACATG
*
14345349 ATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
257 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
*
14345414 CTCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
322 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
*
14345479 GAAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
387 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * *
14345544 TTTTGTGCATGCCAACAAAAATACAAGGATCACATCTATCAAG-TTGGGGCCAAAACTCCTTGCA
452 TTTTGTGCATGCCAA-AAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCG
** * * * *
14345608 AAAAAATTTTAAAAAATCTGGAACCGTAAAAAGTTTAAAAAATTGTAAAAAATAGGAAACGAGTC
516 AAAAAATTTTAAAAAATCCCGAA-CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
* * * *
14345673 CTCTTGTCATGAAACTTCACGTGAAGGCATAAGGGACCATTGTATGAATTTAAAAGCCATAAAAA
580 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* *
14345738 TGGCATTGGAATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
645 TGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * * * * *
14345803 TTGCGCATCCCATCTCTCTAGCTGGCGTAGTGCCCACCCGCCCGTCCGCTCGTTTCATCGATTGG
710 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
** *
14345868 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC--CAGGCCAAGGGTTACGGTAGTAGG
775 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGCA--CTGAGGGTTACGGTAGCAGG
* *
14345931 ATCGACAGCATGCAGAGGGGGA-CCGGCCGATCCCCGGCTTGTGCATCCCGCCCCTCTGG
838 ATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * * *
14345990 CCGGCTGAGCACCTGTACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCT
1 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * *
14346055 AAGCATACAGAGTTCATTCCTAGTCTAAGATTGGACCGGAGCAAGGGTTGCAGTAGCACATGCTG
66 AAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCTG
* * * *
14346120 GGCTCGAGCATGTGTTGGTGTCAAATTTTTCTTCGTCGGGGCACTATCATCGGAGCATCGTCGGA
131 GGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCGTCGGA
*
14346185 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCAGGGGGGTGAGCGCACATGATG
196 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTC-GGGGGGTGTGCGCACATGATG
*
14346250 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAGTC
260 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
14346315 ACACCCCCTTAGAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAACGTGTCTGAA
325 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
14346380 ATGGGGGCCCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTT
390 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* *
14346445 TGTGCATGCCAACAAAAATACAAGGGTCACATCTACCAAGTTTGGGGCCAAAATTCCTTCCGAAA
455 TGTGCATGCCAA-AAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* *
14346510 AAATTTAAAAAAATCCCAAATCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
519 AAATTTTAAAAAATCCCGAA-CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* ** *
14346575 TTGCAATGAAACTTCACGTGAAGGCTTAAGGGATAATTGTATGAATTTGCAAGCCATAAAAATGG
583 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * * *
14346640 CATTAGCTTGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCCATCGATCAATGGCTTG
648 CATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
14346705 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACTCGTTTTGTCGGTTGGCTT
713 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* ** * *
14346770 AGGCATACAGAGTTCATTCCCAGTCTAAGATTGGACCGCA-TCGAGGGTTGCGGTAGCAGGATCG
778 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGCACT-GAGGGTTACGGTAGCAGGATCG
** * * *
14346834 GTAGCACGAAGAGGGGGACCCTGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGG
842 ACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * *
14346890 CCGGTTGAGTGCCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCT
1 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * * *
14346955 AAGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTACGGCAGCACATGCTG
66 AAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCTG
* ** *
14347020 GGCTCGGGCATGTGCTCGTGCCGTATTTTTC-T--TC---G--------TCGGAGCATCGTCGAA
131 GGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCGTCGGA
* * *
14347071 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGAGGGGGT-------T-TGTGTACATGATGT
196 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGTGTGCGCACATGATGT
* * *
14347128 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTTCGTCAAACCTCGAGAACTCA
261 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
14347193 CACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAA
326 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
14347258 TGGGAAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
391 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
14347323 TTACATGCCAAAAAATATACAAGGATCACGTTTACAAAGTTTGGGGCCAAAACTCCTTCCGAAAA
456 GTGCATGCCAAAAAA-ATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** ** * *
14347388 AATTTTAAAAAATCCCGATCCACAAAAAGTTTTGAAAATCATGAAAAATAGAAAGCGAGTCGTCT
520 AATTTTAAAAAATCCCGA-ACGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
14347453 TGCCATTAAACTTCACGTGAAGTCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
584 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
14347518 ATTTGCATGCTA-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT-CACGGCTTG
649 ATTGGCATG-TAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * *
14347581 CGCATCCCGTCTTTCTGGCCAACGTAGTG-CCGCCTGCCCGCTCGCTCGTTTTGTCGGTTGGCTT
713 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * * * * * *
14347645 AGGCATATGGAGTTTATTCCCAGTCTAAGATCAGAATGGA-TCAAGGGTTACGGCAGTAGGATCG
778 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGCACT-GAGGGTTACGGTAGCAGGATCG
* * * ** * *
14347709 GCAACACGCAAAGGGGGACCCGATCGATCCTCGGCTTGCGCATCCCACCCCTCTGG
842 ACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * *
14347765 CCGG-TCGAGCGCCTGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTC
1 CCGGCT-GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* **
14347829 TAAG-AT-C--AG---------A--C-----T------GGACTGAGGGTTGTGGCAGCACATGCT
65 TAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCT
* *** *
14347868 GGGCTCGAGCATGTGCTGGTGCTGCATTTTTCTTCG-CTGGCGCACCATCATCGGAGCATCGTCG
130 GGGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTC-GGGGCACCATCATCGGAGCATCGTCG
* * * * *
14347932 GAGAACCTGATCGACGGCATTAGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
194 GAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTC-GGGGGGTGTGCGCACATGA
* *
14347997 TGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAAACCTCGAGAAC
258 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
** * * *
14348062 TCAGTCCCCCTTAAAAAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCACTAAAGTGTCT-
323 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
14348126 AGAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTT
388 A-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * *
14348191 TTGTGTGCATGCCACCAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCTTTCCG
452 TTTTGTGCATGCCA-AAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCG
* *
14348256 -AAAAATTTTAAAAAATGCCGAACCGTAAAAAGTTTCAAAAATCTTGAAAAATAGAAAACGAGTC
516 AAAAAATTTTAAAAAATCCCGAA-CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
14348320 GTCTTGCCATGAAACTTCA--TCGAAGGC-TAAGGGAGCCATTTGT-T-AA-TTACAAGCCATAA
580 GTCTTGCCATGAAACTTCACGT-GAAGGCTTAAGGGA-CCA-TTGTATGAATTTACAAGCCATAA
* * * *
14348379 AAATGGCATTGGACAAT-T-G--ATAGGGAGATAGGGCCTAAA-CCA-ATACCACAACC-ATCGA
642 AAATGGCATTGG-C-ATGTAGAAATATGAAGAT-GTGCCTAAACCCACCTACCAC--CCTATCGA
* * * * *
14348437 -CCAGGGC-TGCGCA-ACCGTC-CTC--GCCGACGATAGT---CTCCCGCTCCG-TCG-TCATTT
702 TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACG-TAGTGCCCGCCCGC-CCGCCCGCTCGTTT
* * *
14348491 --TC-G-T--C-T--GCACTACGG-GTT-ATT--CAGCCTAAG-TCAG-CAG-AATCG-GGGTTT
765 CGTCGGTTGGCTTAGGCA-TACGGAGTTCATTCCCAGTCTAAGATCAGACTGCACT-GAGGG-TT
* * * * * * *
14348539 GCCGG-AGTAGG-GCGGAC-GCA--CATGAGGGGG-CCCAG-CGATCCGC-G-TTACGAAT----
827 -ACGGTAGCAGGATC-GACAGCACGCA-GAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCG
*
14348591 ---CTGTGG
889 CCCCTCTGG
** * * *
14348597 TAGG-TCGAGCG-CC-CACG-TCGTTTC-TGGATAGACTTAGGCATTAC-GAGTTCCATTGCCAG
1 CCGGCT-GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA-TACGGAGTT-CATTCCCAG
* * * * * *
14348656 TAATAAAGCATA-TGGGTTCATTCACA-TCTAAGAT-GGACCTTGA-CGAGGGTTG-TGACA-CA
63 T-CT-AAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACC-GGACCGAGGGTTGCAG-CAGCA
* * *
14348715 CA-GACCTGGAG--CGGG-ATGT-CTGG-GCC-AGTATTT-TT--T-------CC-TGA--GG-G
124 CATG--CTGG-GCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCATCGGAG
* * * *
14348759 -ATAC--CGGAGAACCTGACCTGCGGCGTTGGGGTTCCGACGATCCGGGGGGCCGGGGGGTGTGC
186 CAT-CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGTGTGC
*
14348821 ACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
250 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
14348886 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
315 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* * *
14348951 AGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACCTCCAGTTTTTAGC
380 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* ** * *
14349016 TGAAGTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACGAAGTTTGGGGCCAAAAAT
445 TGAATTTTTTTGTGCATGCCAA-AAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACT
* *
14349081 CCTTCTGAAAAAATTTTAAAAAATTCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
509 CCTTCCGAAAAAATTTTAAAAAATCCCGAA-CGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
14349146 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
573 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* * * *
14349211 ATAAAAATGGCATTGACACGTAAAAATATGAAGTTGTGCCTAAACCCACCTACCACCCTATCGAT
638 ATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * * *
14349276 CCACAGCTTTCGCATCCCGTCTCTTTGGCTGACGTAGTGCCTGCCAGCCCGCCTGCCCGCTCGTT
703 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG-C--CC-GCCCGCCCGCCCGCTCGTT
* * * * * *
14349341 TCCTCGGTTGGCTTAGGCATACAGAGTTCATT-CTAGTCTAAGATCAGACTGGACAGAAGGTTAC
764 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGCACTGAGGGTTAC
* * * * *
14349405 GGTAGCAGGATTGGCAGCACACAGAGGGGGACCCAGCCGATCCCCGGCTTGCGCATCCCACCCCT
829 GGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCT
14349470 CTGG
894 CTGG
* * * * * *
14349474 CCGGTTGATCAACCCGTACACTCGTTTAGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
1 CCGGCTGAGC-GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * *
14349539 TAAGCATACAGAGTTCATTCCCAGTCTAAGATCGAACCGAACCGAGGTTTGCACCAGCACATGCT
65 TAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCT
* * * * * * **
14349604 CGGCTCGGGCATGTGTTGGTG-CAGCATTTTTCTTCATCAGGGCACCATCGTCGGAGCATCACCG
130 GGGCTCGGGCATGTGCTGGTGCCA-AATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCGTCG
* * *
14349668 GAGAACCTGACCGACGGCATTGGGGTTTCGACGATCGGGGGGGGCGGTGGGGTGTGCGCACATGA
194 GAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCGG-GGGGTGTGCGCACATGA
14349733 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
258 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
14349798 TCACACCCCCTTAAAGAACATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
323 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
14349863 AAATGAGGACACTTTTTTCAAAAGGTCACAAAATCTTGTATACTTCGAGTTTTTAGCTGAATTTT
388 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* ** *
14349928 TTTGTGCATGCCAGAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-AACTTGCCA
453 TTTGTGCATGCCA-AAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTT-CCG
** * * *
14349992 AAAAAATTTTAAAAAATCTTGAACTGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAATGAGTC
516 AAAAAATTTTAAAAAATCCCGAAC-GTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
*
14350057 ATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
580 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* ** *
14350122 TGACATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCAGCCTATCGAAT-CACGG
645 TGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG-ATCCACGG
* * * *
14350186 CTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G--CGCTCGCCCGCCCGCTCGTTTCATCGGTTC
709 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTG
* * * * *
14350247 ACTTAGGCATACGGAGTTCATTCCTAGTCTAAGGTTC-GACTGGACTGAGGGTTACGGCAGCAGG
774 GCTTAGGCATACGGAGTTCATTCCCAGTCTAA-GATCAGACTGCACTGAGGGTTACGGTAGCAGG
* * * ** * * *
14350311 AT-TAGTAGCACGCGGAGGGGGACCCGATCGATCCCTGGCTTGTGCATCCCGCACCTCTGG
838 ATCGA-CAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
14350371 CCGGCTGAGCGCCCGCA
1 CCGGCTGAGCGCCCGCA
14350388 TGCTTAGACT
Statistics
Matches: 3761, Mismatches: 430, Indels: 411
0.82 0.09 0.09
Matches are distributed among these distances:
828 19 0.01
829 19 0.01
830 5 0.00
831 4 0.00
832 270 0.07
833 126 0.03
834 14 0.00
835 14 0.00
836 26 0.01
837 10 0.00
838 17 0.00
839 19 0.01
840 6 0.00
841 12 0.00
842 7 0.00
843 11 0.00
844 14 0.00
845 13 0.00
846 7 0.00
847 8 0.00
848 2 0.00
849 62 0.02
850 16 0.00
851 14 0.00
852 6 0.00
853 11 0.00
854 15 0.00
855 7 0.00
856 1 0.00
857 3 0.00
858 1 0.00
859 9 0.00
860 15 0.00
861 12 0.00
862 12 0.00
863 60 0.02
864 17 0.00
865 18 0.00
866 28 0.01
867 17 0.00
868 32 0.01
869 12 0.00
870 17 0.00
871 81 0.02
872 241 0.06
873 5 0.00
874 3 0.00
875 194 0.05
876 38 0.01
877 418 0.11
878 4 0.00
879 9 0.00
880 14 0.00
881 28 0.01
882 36 0.01
883 8 0.00
884 5 0.00
885 4 0.00
886 57 0.02
887 4 0.00
888 2 0.00
890 1 0.00
893 169 0.04
894 30 0.01
895 9 0.00
896 50 0.01
897 98 0.03
898 241 0.06
899 314 0.08
900 177 0.05
901 4 0.00
902 3 0.00
903 47 0.01
904 456 0.12
905 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (897 bp):
CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
AAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCTG
GGCTCGGGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCGTCGGA
GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGTGTGCGCACATGATGT
GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
GTGCATGCCAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
ATTTTAAAAAATCCCGAACGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
TGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
CATACGGAGTTCATTCCCAGTCTAAGATCAGACTGCACTGAGGGTTACGGTAGCAGGATCGACAG
CACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
Found at i:14346967 original size:26 final size:26
Alignment explanation
Indices: 14346931--14346983 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14346921 GTTGACTTAG
14346931 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14346957 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14346983 G
1 G
14346984 ATCAGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:14348217 original size:872 final size:870
Alignment explanation
Indices: 14343663--14350383 Score: 6716
Period size: 899 Copynumber: 7.7 Consensus size: 870
14343653 GAGGGTTGTG
* *
14343663 GCATTTGAGATTTTACAGGTTTGCAGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
14343728 TCAAATGGTCACAAAAT-TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
* * *
14343791 AAATACGAGGATCACGTCTACCAAGTTTGGGGCCAAAACGT-CTTTCGAAAAAA-TTTAAAAAAT
131 AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAAC-TCCTTCCGAAAAAATTTTAAAAAAT
*
14343854 CCCCAACC-TCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC-
195 CCCGAACCGT-AAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* *
14343917 TCATGTGAAGGCTTAAGGGACCAATGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC-A
259 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCTA
14343981 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
324 -AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT-CACGGCTTGCGCATCCCGTCT
* * * * *
14344046 ATCTGGCCAACGTAGTGCCCGCCCGCCAGCCCGCCCGTTCGTTTCGTCGGTTGGCTTAGGCATAC
387 CTCTGGCCGACGTAGT----G-CCGCCTGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * * * * * *
14344111 GGAGTTCATTCCCAGTCTAAGATC-GGATGAGA-CTGAGGGTTCCCGTAGCAAGATCGACAGAAC
447 GGAGTTCATTCCCAGTCTAAGATCAGAATG-GATC-AAGGGTTACGGCAGCAGGATCGGCAGCAC
** * * * * * *
14344174 ATAGAGGGGGACCCGATCGATCCCC-GCTTGCACATCCCGCCCC-CTGGCCTG-CTGAGCACCCG
510 GCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTC-GAGCGCCTG
** *
14344236 CACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGATCATTCCCAGTCTAAGCATACGGAGTTC
574 CACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C--AG---
* *** *
14344301 ATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGCAACAGCACATGCTGGGCTTGGGCATGTGC
632 ------A--C-----T--G---G-ACTGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGC
* * **
14344366 TGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGG-GCCATCACCGGAGAACCTGACCGACG
678 TGGTGCCGCATTTTTCTTCGT-GGCGCACCATC-TCGGAG-CATCGTCGGAGAACCTGACCGACG
** * * *
14344430 GCATTGGGGTTCCGGTGGTCGGTGGAGTCGGGGTGGGTGTGCGCACATGATGTGCGATGGGTGCT
740 GCATTGGGGTTCCGACGATCGGGGGGGTCGGGG-GGGTGTGCGCACATGATGTGCGATGGGTGCT
*
14344495 GGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCACACCCCCTTAAA
804 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
14344560 GA
869 GA
*
14344562 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACGCTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
14344627 TCAAATGGTCACAAAAT-TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
* *
14344690 AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACGCCTTTCGAAAAAATTTTAAAAAATC
131 AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
14344755 CCGAA-C-TCAAAAAGTTTTC-AAAATCGTGAAAAATAGAAAACGAGAT-GTCTTGCCATGAAAC
196 CCGAACCGT-AAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAG-TCGTCTTGCCATGAAAC
* * * *
14344816 TTCACGTGAAGACTTAAGGGACCATTGTATGAATTTAGAAGCAATAAAAATGGCATTGGCAGGC-
258 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCT
* * * * *
14344880 AAAATATGAAGGTGTGCCTACACCCATCAACCACCTTATCGATACACGGCTTGCGCATCCCGTCT
323 AAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT-CACGGCTTGCGCATCCCGTCT
** * ** ** *
14344945 CTCTGGCCGGTGTAGTGCCCGTCCTCCCCCCCCGC-CTGCTCGTTTCGTTAGTTGTTTTA-ACGA
387 CTCTGGCCGACGTAGTG-CCG-CCT----GCCCGCTC-GCTCGTTTCGTCGGTTGGCTTAGGC-A
*** * * *
14345008 TACGGAGTTCATTCCCAGTCTAAGATCAGAGCAGACTGAA-GGTTACGACAACAGGATCGGCAGC
444 TACGGAGTTCATTCCCAGTCTAAGATCAGAATGGA-TCAAGGGTTACGGCAGCAGGATCGGCAGC
** * * * * * ** * *
14345072 ATACAGAAGGGGACCCGATCGATCTCCGGCTGAGCGC--CCGCA-CGCTCGTTTCATGGGTTGA-
508 ACGCAGAGGGGGACCCGACCGATCCCCGGCT-TGCGCATCC-CACCCCTC-TGGC--CGGTCGAG
**** ** ***** * * *
14345133 CTTAAGCATACG-GAG-TTCATTCCCAGTC-TAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
568 CGCCTGC--ACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
** * *** * *
14345195 GACCAGA-TCGAGGATTGTGATGGCACATACTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCT
631 GACTGGACT-GAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
* * * * *
14345259 TTGTTGGGGCACCATCGCTGGAGCATCG-CAGGAGAACCT-AACGGCGGCATTGGGGTTCCGACG
695 TCG-TGGCGCACCATCTC-GGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGGGTTCCGACG
*
14345322 ATC-GGGGGGTC--GGGGG-GTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATAT
757 ATCGGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
*
14345383 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCTCTTAAAGA
822 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
14345432 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
14345497 TCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
* * *
14345562 AAATACAAGGATCACATCTATCAAG-TTGGGGCCAAAACTCCTTGCAAAAAAATTTTAAAAAATC
131 AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
** * * * * * *
14345626 TGGAACCGTAAAAAGTTTAAAAAATTGTAAAAAATAGGAAACGAGTCCTCTTGTCATGAAACTTC
196 CCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* * *
14345691 ACGTGAAGGCATAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGAATGC-AGA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCTA-A
*
14345755 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCT
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT-CACGGCTTGCGCATCCCGTCTCT
* * * * * * *
14345820 CTAGCTGGCGTAGTGCCCACCCGCCCG-TCCGCTCGTTTCATCGATTGGCTTAGGCATACGGAGT
389 CTGGCCGACGTAGTG-CCGCCTGCCCGCT-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* * * * *
14345884 TCATTCCCAGTCTAAGATCAGACCA-GG-CCAAGGGTTACGGTAGTAGGATCGACAGCATGCAGA
452 TCATTCCCAGTCTAAGATCAGA--ATGGATCAAGGGTTACGGCAGCAGGATCGGCAGCACGCAGA
* * * * * *
14345947 GGGGGA-CCGGCCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGG-CTGAGCACCTGTACAC
515 GGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTC-GAGCGCCTGCACGC
* *
14346010 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACAGAGTTCATTCC
579 TCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C--AG--------
* ** * * *
14346075 TAGTCTAAGATTGGACCGGAGCAAGGGTTGCAGTAGCACATGCTGGGCTCGAGCATGTGTTGGTG
632 -A--C------TGGA-C--TG--AGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* ** * * *
14346140 TCAAATTTTTCTTCGTCGGGGCACTATCATCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTG
683 CCGCATTTTTCTTCGT-GGCGCACCATC-TCGGAGCATCGTCGGAGAACCTGACCGACGGCATTG
* *
14346205 GGGTTCCGACGATCGGGGGGGTCAGGGGGGTGAGCGCACATGATGTGCGATGGGTGCTGGTACTT
746 GGGTTCCGACGATCGGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTT
* *
14346270 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAGTCACACCCCCTTAGAGA
811 GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* * *
14346330 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAACGTGTCTGAAATGGGGGCCCTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
14346395 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
* * *
14346460 AAATACAAGGGTCACATCTACCAAGTTTGGGGCCAAAATTCCTTCCGAAAAAATTTAAAAAAATC
131 AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * *
14346525 CCAAATCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCAATGAAACTTC
196 CCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
** * * *
14346590 ACGTGAAGGCTTAAGGGATAATTGTATGAATTTGCAAGCCATAAAAATGGCATTAGCTTG-TAGA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCTA-A
* *
14346654 AATATGAAGATGTGCCTAAACCCACCTACCACCCCATCGATCAATGGCTTGCGCATCCCGTCTCT
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC-ACGGCTTGCGCATCCCGTCTCT
* * * * *
14346719 CTGGCCGACGTAGTGCCCGCCCGCCCGCCCACTCGTTTTGTCGGTTGGCTTAGGCATACAGAGTT
389 CTGGCCGACGTAGTG-CCGCCTGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
** ** * * * * * *
14346784 CATTCCCAGTCTAAGATTGGACCGCATCGAGGGTTGCGGTAGCAGGATCGGTAGCACGAAGAGGG
453 CATTCCCAGTCTAAGATCAGAATGGATCAAGGGTTACGGCAGCAGGATCGGCAGCACGCAGAGGG
* * * *
14346849 GGACCCTG-CCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAGTGCCTGCACGCTCG
518 GGACCC-GACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTCGAGCGCCTGCACGCTCG
* *
14346913 TTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAG
582 TTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C--AG---------A-
* ** *
14346978 TCTAAGATCAGACCGGACCAAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTCGTGCCG
633 -CT--G----GA-CTG----AGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCG
* * *
14347043 TATTTTTC-T--T--CG-------TCGGAGCATCGTCGAAGAACCTGACCGGCGGCATTGGGGTT
686 CATTTTTCTTCGTGGCGCACCATCTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTT
* * * *
14347096 CCGACGATCGAGGGGGT--------T-TGTGTACATGATGTGTGATGGGTGCTGGTACTTGGCCC
751 CCGACGATCGGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
* *
14347152 TTATATTGGCCCCCTATCCTTCGTCAAACCTCGAGAACTCACACCCCCTTAAAGA
816 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* * * *
14347207 GCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAATGGGAAAACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* *
14347272 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTACATGCCAA-AA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
* * *
14347336 AATATACAAGGATCACGTTTACAAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
131 AA-ATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* ** ** * * *
14347401 CCCGATCCACAAAAAGTTTTGAAAATCATGAAAAATAGAAAGCGAGTCGTCTTGCCATTAAACTT
195 CCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* *
14347466 CACGTGAAGTCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTTGCATGCTAA
260 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCTAA
*
14347531 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCACGGCTTGCGCATCCCGTCTTTC
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCACGGCTTGCGCATCCCGTCTCTC
* * * *
14347596 TGGCCAACGTAGTGCCGCCTGCCCGCTCGCTCGTTTTGTCGGTTGGCTTAGGCATATGGAGTTTA
390 TGGCCGACGTAGTGCCGCCTGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * *
14347661 TTCCCAGTCTAAGATCAGAATGGATCAAGGGTTACGGCAGTAGGATCGGCAACACGCAAAGGGGG
455 TTCCCAGTCTAAGATCAGAATGGATCAAGGGTTACGGCAGCAGGATCGGCAGCACGCAGAGGGGG
* *
14347726 ACCCGATCGATCCTCGGCTTGCGCATCCCACCCCTCTGGCCGGTCGAGCGCCTGCACGCTCGTTT
520 ACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTCGAGCGCCTGCACGCTCGTTT
*
14347791 CATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGGGTTGTG
585 CATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGGGTTGTG
* *
14347856 GCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTTTTCTTCGCTGGCGCACCATCATCG
650 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG-TGGCGCACCATC-TCG
* * * *
14347921 GAGCATCGTCGGAGAACCTGATCGACGGCATTAGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTG
713 GAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGGTG
* *
14347986 TGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAA
778 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
** *
14348051 ACCTCGAGAACTCAGTCCCCCTTAAAAA
843 ACCTCGAGAACTCACACCCCCTTAAAGA
* *
14348079 GCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCACTAAAGTGTCT-AGAATGGGGACACTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA-AATGGGGACACTTTT
* * *
14348143 TTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTGTGTGCATGCCACCA
65 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
*
14348208 AAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCTTTCCG-AAAAATTTTAAAAAAT
130 AAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* *
14348272 GCCGAACCGTAAAAAGTTTCAAAAATCTTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
195 CCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
14348337 CA--TCGAAGGC-TAAGGGAGCCATTTGT-T-AA-TTACAAGCCATAAAAATGGCATTGG-A--C
260 CACGT-GAAGGCTTAAGGGA-CCA-TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * * * * * * *
14348393 -AATTGATAGGGAGATAGGGCCTAAA-CCA-ATACCACAACC-ATCGACCAGGGC-TGCGCA-AC
322 TAA--AATATGAAGAT-GTGCCTAAACCCACCTACCAC--CCTATCGATCACGGCTTGCGCATCC
*
14348452 CGTC-CTC--GCCGACGATAGT-CTC-CC-GCTCCG-TCG-TCATTT--TC-G-T--C-T--GCA
382 CGTCTCTCTGGCCGACG-TAGTGC-CGCCTGC-CCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * * * *
14348500 CTACGG-GTT-ATT--CAGCCTAAG-TCAGCA-GAATC-GGGGTTTGCCGG-AGTAGG-GCGG-A
444 -TACGGAGTTCATTCCCAGTCTAAGATCAGAATGGATCAAGGG-TT-ACGGCAGCAGGATCGGCA
* * * * * **
14348555 CGCA--CATGAGGGGG-CCC-AGCGATCCGC-G-TTACG-A----A--TCTGTGGTAGGTCGAGC
506 -GCACGCA-GAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTCGAGC
* * *
14348607 GCC--CACG-TCGTTTC-TGGATAGACTTAGGCATTAC-GAGTTCCATTGCCAGTAATAAAGCAT
569 GCCTGCACGCTCGTTTCATGGGTTGACTTAGGCA-TACGGAGTT-CATTCCCAG---T----C-T
* * *
14348667 ATGGGTTCATTCACATCTAAGATGGACCTTGACGAGGGTTGTGACA-CACA-GACCTGGAG--CG
624 A--AG---A-TCAGA-C-----TGGA-C-T---GAGGGTTGTGGCAGCACATG--CTGG-GCTCG
* *
14348728 GG-ATGT-CTGG-GCCAGTA-TTTT-TTCCT---G----A----GG-G-ATAC--CGGAGAACCT
669 GGCATGTGCTGGTGCC-GCATTTTTCTTCGTGGCGCACCATCTCGGAGCAT-CGTCGGAGAACCT
* * * *
14348773 GACCTG-CGGCGTTGGGGTTCCGACGATCCGGGGGG-CCGGGGGGTGTGCACACATGATGTGCGA
732 GACC-GACGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGA
14348836 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
796 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
14348901 CCCTTAAAGA
861 CCCTTAAAGA
*
14348911 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACATTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * *
14348976 TCAAATGGTCACAAAATCTTGTACACCTCCAGTTTTTAGCTGAAGTTTTTTGTGCATGCCAACAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
** * * * *
14349041 AAATACAAGGATCATGTCTACGAAGTTTGGGGCCAAAAATCCTTCTGAAAAAATTTTAAAAAATT
131 AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
14349106 CCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
196 CCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* *
14349171 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGACACG-TAAA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCT-AA
* * *
14349235 AATATGAAGTTGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTTCGCATCCCGTCTCT
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT-CACGGCTTGCGCATCCCGTCTCT
* * * * *
14349300 TTGGCTGACGTAGTGCCTGCCAGCCCGCCTGCCCGCTCGTTTCCTCGGTTGGCTTAGGCATACAG
389 CTGGCCGACGTAGTGCC-GCCTGCCCG-CT---CGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * * * * *
14349365 AGTTCATT-CTAGTCTAAGATCAGACTGGA-CAGAAGGTTACGGTAGCAGGATTGGCAGCACACA
449 AGTTCATTCCCAGTCTAAGATCAGAATGGATCA-AGGGTTACGGCAGCAGGATCGGCAGCACGCA
* * * * *
14349428 GAGGGGGACCC-AGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTTGATCAACCCGTA
513 GAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTCGAGC-GCCTGCA
*
14349492 CACTCGTTT-AGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCA
576 CGCTCGTTTCA-TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C--AG----
* * * *
14349556 TTCCCAGTCTAAGATCGAACCGAACCGAGGTT-TGCACCAGCACATGCTCGGCTCGGGCATGTGT
632 -----A--CT--G---G-ACTG-A--G-GGTTGTG--GCAGCACATGCTGGGCTCGGGCATGTGC
* * **
14349620 TGGTGCAGCATTTTTCTTCATCAGG-GCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACG
678 TGGTGCCGCATTTTTCTTCGT--GGCGCACCATC-TCGGAGCATCGTCGGAGAACCTGACCGACG
* * *
14349684 GCATTGGGGTTTCGACGATCGGGGGGGGCGGTGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
740 GCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
14349749 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
805 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
14349814 A
870 A
* *
14349815 ACATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGAGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* *
14349880 TCAAAAGGTCACAAAATCTTGTATACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAGA-A
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA-ACA
* ** *
14349944 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-AACTTGCCAAAAAAATTTTAAAAAA
130 AAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTT-CCGAAAAAATTTTAAAAAA
** * * * * *
14350008 TCTTGAACTGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAATGAGTCATCTTGCCATGAAACT
194 TCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
*
14350073 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGACATTGGCA--CAT
259 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC-T
*
14350136 AGAAATATGAAGATGTGCCTAAACCCACCTACCAGCCTATCGAATCACGGCTTGCGCATCCCGTC
323 A-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG-ATCACGGCTTGCGCATCCCGTC
* * * **
14350201 TCTCTGGCCGGCGTA--G-CG-CTCGCCCGCCCGCTCGTTTCATCGGTTCACTTAGGCATACGGA
386 TCTCTGGCCGACGTAGTGCCGCCT-GCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * * * ** * *
14350262 GTTCATTCCTAGTCTAAGGTTC-GACTGGA-CTGAGGGTTACGGCAGCAGGATTAGTAGCACGCG
450 GTTCATTCCCAGTCTAA-GATCAGAATGGATC-AAGGGTTACGGCAGCAGGATCGGCAGCACGCA
* * * * *
14350325 GAGGGGGACCCGATCGATCCCTGGCTTGTGCATCCCGCACCTCTGGCCGG-CTGAGCGCC
513 GAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTC-GAGCGCC
14350384 CGCATGCTTA
Statistics
Matches: 4932, Mismatches: 574, Indels: 635
0.80 0.09 0.10
Matches are distributed among these distances:
828 19 0.00
829 18 0.00
830 4 0.00
832 273 0.06
833 124 0.03
834 14 0.00
835 12 0.00
836 27 0.01
837 13 0.00
838 16 0.00
839 15 0.00
840 8 0.00
841 14 0.00
842 8 0.00
843 16 0.00
844 16 0.00
845 18 0.00
846 10 0.00
847 9 0.00
848 1 0.00
849 57 0.01
850 16 0.00
851 16 0.00
852 6 0.00
853 13 0.00
854 19 0.00
855 5 0.00
856 1 0.00
857 3 0.00
858 2 0.00
859 9 0.00
860 13 0.00
861 15 0.00
862 13 0.00
863 61 0.01
864 18 0.00
865 25 0.01
866 40 0.01
867 64 0.01
868 121 0.02
869 18 0.00
870 184 0.04
871 176 0.04
872 372 0.08
873 82 0.02
874 10 0.00
875 220 0.04
876 114 0.02
877 424 0.09
878 8 0.00
880 7 0.00
881 26 0.01
882 26 0.01
883 8 0.00
884 5 0.00
885 5 0.00
886 62 0.01
887 5 0.00
888 2 0.00
889 1 0.00
891 2 0.00
892 1 0.00
893 74 0.02
894 30 0.01
895 14 0.00
896 41 0.01
897 94 0.02
898 245 0.05
899 609 0.12
900 346 0.07
901 13 0.00
902 37 0.01
903 52 0.01
904 461 0.09
905 6 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (870 bp):
GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAA
AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
CCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCTAAA
ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCACGGCTTGCGCATCCCGTCTCTCT
GGCCGACGTAGTGCCGCCTGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
TCCCAGTCTAAGATCAGAATGGATCAAGGGTTACGGCAGCAGGATCGGCAGCACGCAGAGGGGGA
CCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTCGAGCGCCTGCACGCTCGTTTC
ATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGGGTTGTGG
CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTGGCGCACCATCTCGGAG
CATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGGGGTGTGC
GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
TCGAGAACTCACACCCCCTTAAAGA
Found at i:14349552 original size:26 final size:26
Alignment explanation
Indices: 14349516--14349568 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14349506 GTTGACTTAG
*
14349516 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14349542 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14349568 G
1 G
14349569 ATCGAACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:14351296 original size:26 final size:26
Alignment explanation
Indices: 14351267--14351319 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14351257 CCAATCCGAT
14351267 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
*
14351293 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14351319 C
1 C
14351320 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:14352166 original size:26 final size:26
Alignment explanation
Indices: 14352137--14352189 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14352127 CCGGTCTGAT
* * *
14352137 CTTAGATTGGGAGTGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14352163 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14352189 C
1 C
14352190 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.17, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14353063 original size:25 final size:26
Alignment explanation
Indices: 14353029--14353080 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14353019 CTGATCCAAT
14353029 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14353054 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14353080 C
1 C
14353081 CTATGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14354369 original size:899 final size:899
Alignment explanation
Indices: 14352090--14355124 Score: 3969
Period size: 899 Copynumber: 3.4 Consensus size: 899
14352080 TCCGACGATG
* * * * * *
14352090 ATGCCCGAGCCCAACATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGATTGGGAGTGAAC
1 ATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* *
14352155 TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAAGAAACAAGCGTGCGGG
66 -CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGG
* * * * * * *
14352220 CGCTTAGCCGGCTAGAGGGGTGGGATGCGCGAGCCGGGGATCGACCGGGTTCCCCTCTGTGTGCC
130 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCT
** * * * * *
14352285 ACCGATCCTATTGCCGCAACCCTCAGTCTGGTCTGATCTTAGATTGGGAATGAACTCTGTATGCC
195 ACCGATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* *
14352350 TAAGCCAACCGACG-AA--A-CGA----GCGGGCGGGCGGGCACTATGTCGGCCAGAGAGACGGG
260 TAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * * * *
14352407 ATGGGCAAGTCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCCCGTCTTCATATTTCTATGTGC
325 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGC
** *
14352472 CAATGCCATTTTTATGGCTCATAAATTCATACAATGGTCCCTTAAGCCTTGACGTGAAGTTTCAT
390 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* *
14352537 GGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAA
455 GGCAAGACGACTC-GTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAA
* * *
14352602 AATTTTTTTGGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
519 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCAT
* * * * * *
14352667 GCACAAACAAATTCAGCTAAAAAGTCAAAGTGTAAAAGATTTTATGACCTTTTGAAAAAAGTGTC
584 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
14352732 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
649 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
14352797 GGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCAA
714 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * *
14352862 TCACACATCATGTGCGCACA-CCCCCGCCCCCAGATCATCGGATCCCCAATGCTGTCGGTTAGGT
779 TCACACATCATGTGCGCACACCCCCCGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* * * * * * * *
14352926 TATTCGACGATGCTCCGATGATGGTGCCTCGGCGAAGAAAAATGCGACACCAGCAC
844 TCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCAC
* * * * *
14352982 ATGCCCGAGCCTAGCATGTGCTGCTGTAACCCTTGGTCTGATCCAATCTTAGACT-GGAATGAAC
1 ATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* * * *
14353046 TCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTATGTCAACCCACGAAACGAGCGTACGGG
66 -CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGG
* * * * * * * *
14353111 CGCTCAGCCGGCCAGAGGGGCGGAATGCGTAAGCCAGAGATCGGCCAGGTGCCCCTCTACGTGCT
130 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCT
* * * * * *
14353176 ACCGATCTTGCTGCCGCAACCCTCGATCCTGTCCGATCTTAGACTGGTAATGAACTCCGTATGCC
195 ACCGATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * *
14353241 TAAGCCAACCGATGAAACGACCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGA
260 TAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
*
14353306 ATGCGCAAGCCGTGGATCGAAAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGC
325 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGC
*
14353371 CAATGCCATTTTTATGGCTTGTAAATTCATAGAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
390 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
14353436 GGCAACACGACTCGTTTTCTATTTTTCTCGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAA
455 GGCAAGACGACTCG-TTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAA
* * *
14353501 AATTTTTTCGAAAGGAGTTTTGGTCCTAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCAT
519 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCAT
* *
14353566 GCTCAAAAGAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
584 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * * *
14353631 CCCATTTCAAACACTTTAATTGCTACTGGCAGCAAACCTATAAAATCTGAAATGCTCTTTAAAGG
649 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* **
14353696 GGTGTGAGTTCACGAGGTTTGATGAGGGATAGGGGGAAAATATAAGGGCCAAGTACCAGCACCCA
714 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * *
14353761 TCGCACATCATGTGCACACACCCCGCCGCCCCCCGATCGCCAGAACCCCATTGCCGCCGATCAGG
779 TCACACATCATGTGCGCACACCCC-CCGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
** * *
14353826 TTCTCCGGTAATGCTCCGGCGATGGTGCCCCGACGAAGAGAAATGTGGCACCAGCAC
843 TTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCAC
* * * * *
14353883 ATGCCCAAGCCTAGCATCTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTTGACTGGGAATGAAC
1 ATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* * * * *
14353948 AACGTATGCTGAGACTGGGAATGAACTCC-TATGCCTAAGTCAACCAAAGAAACGAGCGTGCGGG
66 -CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGG
** * * *
14354012 CATTCAGCCCGCCAGAGGGG-GGGATGCGTAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTACT
130 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCT
* * * *
14354076 GCTGATCCTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCC
195 ACCGATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
14354141 TAAGCCAACCGACGAAACGAACAAGCAGGCGGGCAGGCGGGCACTACGTCGGCCAGAGAGACGGG
260 TAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
*
14354206 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGC
325 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGC
*
14354271 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCAT
390 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
14354336 GGCAAGACGACTCGTTTCTAGTTTTCACGATTTTCAAAACTTTTTGCGGTTCAGGATTTTTTAAA
455 GGCAAGACGACTCGTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAA
* ** *
14354401 ATTTTTTTGGAAGGAGTTTTCACCCCAAACATGGTAGACATGATCCTTGTATTTTTGTTGGCATG
520 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATG
* * *
14354466 CA-AAAAAATATTCAGCTAAAAACTTGAAGTGTACATGATTTTCTGACCATTTGAAAAAAGTGT-
585 CACAAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
14354529 CCCAGTTT-AGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGG
649 CCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
14354593 GGGTGTGAGTTCTTGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCC
713 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * * *
14354658 ATCCCACATCATGTGCGCACACCCCCCCGACCCCCCCGATTGTTGGAACTCTAATGCCGCCGATC
778 ATCACACATCATGTGCGCACA-CCCCCCG--CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTC
* * * *
14354723 AGGTTCT-AGGCGATGCTCTGACGATGGTGCCCCAACGAAGAAAAATGTGGCACCAACAC
840 AGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCAC
* * *
14354782 ATGCCTGAGCCCAGCATGTGCTGGCGCAA-CC-C--T-CG----G----T---CT--G-AT----
1 ATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* *
14354824 CCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATACGGGC
66 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGC
* * * * * * * *
14354887 CCTCAGCCAGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGGCTGAGTCCCTCTCTGTGTGCTA
131 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTA
* * * * * *
14354952 CCGATCATGCTACCACAACCCTTGGTTCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCT
196 CCGATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * *
14355017 AAGCCAACCGATGAAATGAGCG-GACGGGCGGGC-GGCAGGCATTACGCCGACCAGAGAGATGGG
261 AAGCCAACCGACGAAACGAGCGAG-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
14355080 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
325 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
14355125 CCATCGCACA
Statistics
Matches: 1877, Mismatches: 246, Indels: 58
0.86 0.11 0.03
Matches are distributed among these distances:
873 20 0.01
874 120 0.06
875 120 0.06
880 2 0.00
881 1 0.00
883 2 0.00
886 1 0.00
890 1 0.00
891 185 0.10
892 47 0.03
894 3 0.00
895 4 0.00
897 1 0.00
898 143 0.08
899 696 0.37
900 327 0.17
901 170 0.09
902 34 0.02
ACGTcount: A:0.25, C:0.24, G:0.26, T:0.25
Consensus pattern (899 bp):
ATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGC
GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTA
CCGATCCTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
AAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCC
AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
GCAAGACGACTCGTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAA
TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGC
ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
ACACATCATGTGCGCACACCCCCCGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCAC
Found at i:14356168 original size:26 final size:26
Alignment explanation
Indices: 14356139--14356191 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14356129 CCTGTCCGAT
*
14356139 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14356165 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14356191 C
1 C
14356192 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14357052 original size:26 final size:26
Alignment explanation
Indices: 14357023--14357075 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14357013 CTGATCCGAT
14357023 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
14357049 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14357075 C
1 C
14357076 CTAAGCCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:14357439 original size:877 final size:872
Alignment explanation
Indices: 14355427--14357931 Score: 3365
Period size: 877 Copynumber: 2.9 Consensus size: 872
14355417 ATGCCGATCC
* *
14355427 TGCTGCCAGCAA-CCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACT-CGTATGCCTAA-CCA
1 TGCTGCCAGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14355489 ACGAG-AA-A-C-GAAGGGCGGGCGGGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAAGCCG
66 ACGAGAAAGAGCGGACGGGC-GGCGGGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
14355550 TGATCGAT-GAGGTGGTAGGTGGGTTT-GGCACATCTTCATATATCTACGCCAATGCCATTTTTA
130 TGATCGATAG-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGCCAATGCCATTTTTA
14355613 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-TCG
194 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * *
14355677 ATTTC-ATTTTT--CGA-TTTTCAAACTTTTTCGATT-GGG-TTTTTTAAAATTTTTTCGAAAGG
259 TTTTCTATTTTTCACGATTTTTAAAACTTTTT-GGTTCGGGATTTTTTAAAATTTTTTAGAAAGG
* *
14355736 ATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAAAAAACATTCA
323 AATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAAAAAAAATTCA
* * *
14355801 GCTAAAAACTCGAAGTGTACAAGGTTTTGTGACTATTTGAAAAAAGTGTCCCCATTTCAAACACT
388 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
14355866 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTTGA
453 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* *
14355931 GGTTTGATTAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACACATCGCACATCATGTGC
518 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACACATCGCACATCATGTGC
* ** * * *
14355996 GTACACCCCCCTCCCCCCCGATGGCCGGAACCTCAATGCCGTCGGTCAGGTTCTCCGCTGATAGT
583 GCACACCCCCCGGCCCCCCGATGGCTGGAACCCCAATGCCGTCGGTCAGGTTCTCCGCGGAT-GT
* * *
14356061 GCCCTGGCGAAGAAAAATGCAGCACCAGCACATACTCGAGCCCAGCATGTGCTGCCGCAACCCTC
647 GCCCTGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA-CATGTGCTGCCGCAACCCTC
* *
14356126 GGTCCTG-TCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTAT
711 GGT-CTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
14356190 GCCTAAGTCAACCCACGAAACAAGCGTGCGTGCCCTCAGCCGCCAGAGGGGCGGGATGCACAAGT
775 GCCTAAGCCAACCCACGAAACAAGCGTGCGGGCCCTCAGCCGCCAGAAGGACAGGATGCACAAGC
* *
14356255 CGGGGATCGGTCGGATCCCTTTCTGTGTGCTAGCAA
840 CGGGGATCGATCGGATCCC-TTC--TCTGCTAGCAA
* * * * * *
14356291 T-CTTGCTACTGCAACCATCAGTC-CGTTCTGATCATAGGCTGGGAATGAACTCCGTATGCCTAA
1 TGC-TGC--CAGCAACCCTCGGTCTAG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *
14356354 GCCAATTGACGAAACGAGCAGG-CGGGCGG-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
62 GCCAA-CGA-GAAA-GAGC-GGACGGGCGGCGGGGGCACTACGTCGGCCAGAGAGACGGGATGCG
*
14356417 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGTCAATG
123 CAAGCCGT-GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA--TGCCAATG
*
14356482 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAA
185 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* *
14356547 GACGGCTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTAATGGTTCGGGATTTTTTAAAATTT
250 GACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTT--TGGTTCGGGATTTTTTAAAATTT
* * * * *
14356612 TTTTGAAAGGAATTTTGGCCCCAAACTTGGTTGATGTGATCCTTGTATTTTTGTCGACGTGCAAA
313 TTTAGAAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAA
* *
14356677 AAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-CCTCAT
378 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
14356741 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
443 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
14356806 GAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCATCACACATCGCA
508 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACACATCGCA
* *
14356871 CATCATGTGCGCACACCCCCC-GACCCCCGATGGCTGGAACCCCAATGCCGTCGTTCAGGTTCTC
573 CATCATGTGCGCACACCCCCCGGCCCCCCGATGGCTGGAACCCCAATGCCGTCGGTCAGGTTCTC
*
14356935 CGCGGATCGTG-CCTCGGCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCGACATGTGCTG
638 CGCGGAT-GTGCCCT-GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC-ACATGTGCTG
* * * *
14356999 TCGTAACCCTTGGTCTGATCCGATCTTAGACTGGGAATAAACTCCGTATGCTTAGACTGGGAATG
700 CCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
** * * *
14357064 AACTCCGTATGCCTAAGCCAACCCACGAAATGAGCGTGCGGGCGCTCTGCCGGCCAGAAGGATAG
765 AACTCCGTATGCCTAAGCCAACCCACGAAACAAGCGTGCGGGCCCTCAGCC-GCCAGAAGGACAG
** * *
14357129 GATGTGCAAGCCGGGGATCGATCGGGT-CC-TC-CT-CTA-C-G
829 GATGCACAAGCCGGGGATCGATCGGATCCCTTCTCTGCTAGCAA
14357167 TGCTGCC-GCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
1 TGCTGCCAGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
*
14357231 TACGAGGAAATGAGCGGACGGGCAGGCGGGAAGGCACTACGTCGGCCAGAGAGACGGGATGCACA
66 -ACGA-GAAA-GAGCGGACGGGC-GGCGGG--GGCACTACGTCGGCCAGAGAGACGGGATGCGCA
* *
14357296 AGCCTTAGATCAATAGGGTGGTA-GTAGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
125 AGCCGT-GATCGATAGGGTGGTAGGT-GGGTTTAGGCACATCTTCATATTTCT--ATGCCAATGC
*
14357360 CATTTTTATGGCTTGTAAATTCATACAATAGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
186 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * *
14357425 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAAGTTTTTGCGGTTCGAGATTTTTTAAAATTTT
251 ACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTT--GGTTCGGGATTTTTTAAAATTTT
* * * * * * *
14357490 TTCAGAAA-GAGTTTTAGCCCCAAACTTGGTAGACGTGATCCATGAATTTTTATTGGCATGCACA
314 TT-AGAAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAA
* *
14357554 AAAAAATTCAGCTAAAAAATCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
378 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
14357619 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
443 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
14357684 GAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAAGGG-CAAGTACCAGCACCCATCTC
508 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT-AAGGGCCAAGTACCAGCACACATCGC
** * * *
14357748 ACATCATGTGCGCACACCCCTCCGGCCCCCCCCCGAT-TATAGGAACCCTAATGTCGCCGGTCAG
572 ACATCATGTGCGCACACCCC-CCGG---CCCCCCGATGGCT-GGAACCCCAATGCCGTCGGTCAG
* *
14357812 GTTCTCCG-GTAATG-GCACCCTAGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAACA
632 GTTCTCCGCG-GATGTG--CCCTGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC-ACA
* * *
14357875 TGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCTGTATG
693 TGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATG
14357932 GCTTGTATTT
Statistics
Matches: 1448, Mismatches: 134, Indels: 99
0.86 0.08 0.06
Matches are distributed among these distances:
863 1 0.00
864 4 0.00
866 6 0.00
867 28 0.02
868 11 0.01
869 4 0.00
870 2 0.00
871 1 0.00
872 4 0.00
873 65 0.04
874 45 0.03
875 29 0.02
876 30 0.02
877 310 0.21
878 224 0.15
879 16 0.01
880 7 0.00
881 1 0.00
882 8 0.01
883 144 0.10
884 198 0.14
885 184 0.13
886 126 0.09
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (872 bp):
TGCTGCCAGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
ACGAGAAAGAGCGGACGGGCGGCGGGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCACGATTTTTAAAACTTTTTGGTTCGGGATTTTTTAAAATTTTTTAGAAAGGAAT
TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCAAAAAAAAATTCAGCT
AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACACATCGCACATCATGTGCGCA
CACCCCCCGGCCCCCCGATGGCTGGAACCCCAATGCCGTCGGTCAGGTTCTCCGCGGATGTGCCC
TGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCACATGTGCTGCCGCAACCCTCGGTCT
GATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
GCCAACCCACGAAACAAGCGTGCGGGCCCTCAGCCGCCAGAAGGACAGGATGCACAAGCCGGGGA
TCGATCGGATCCCTTCTCTGCTAGCAA
Found at i:14358346 original size:26 final size:26
Alignment explanation
Indices: 14358317--14358369 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14358307 CCGGTCTGAT
14358317 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14358343 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14358369 C
1 C
14358370 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14361430 original size:26 final size:26
Alignment explanation
Indices: 14361399--14361451 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14361389 CCGATCCAAT
*
14361399 CTTAGACTGGGAATGAAGTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14361425 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14361451 C
1 C
14361452 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14361582 original size:900 final size:898
Alignment explanation
Indices: 14359776--14362324 Score: 3696
Period size: 900 Copynumber: 2.8 Consensus size: 898
14359766 CCTCGTCCGA
* *
14359776 TCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCCGAACCGACGAAATGAGCGGGCGGG
1 TCTGATCTTAGACTCAGAATGAACTCCGTATGCCTAAG-CC-AACCGACGAAATGAGTGGGC--G
** * ** * *
14359841 CGAGCGGGCGGGCACTACGCTTGCCAGAGAGACGGGATATGCAAGTCGTGGATCGATACGGTGGT
62 -G-GCGGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * ***
14359906 ATGTAGGTTTAGGCA-TATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTC
125 AGGTGGGTTTAGGCACT-TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
14359970 ATAC-AT-GT-CCTT-AG-CTTCACGTGAAGTTTTCATGGCAAGACGACTCATTTTCTATTTTTC
189 ATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* *
14360030 ACGATTTTTGAAACTTTTTGCGGTTCGGCATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
253 ATGATTTTTGAAACTTTTTACGGTTCGG-ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * * * *
14360095 AAACTTGGTAGATATGATCCTTGCATTTTTCTTGGCATGCACAAAAATATTCAGCCAAAAACTCA
317 AAACTTGGTAGACATGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
*
14360160 AAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACACTTTAATGGCTACT
382 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
*
14360225 GGCAGCAAGCCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
447 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
*
14360290 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCGC
512 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC
* * *
14360355 GGCCCCCCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTTCTTCCGACGATGCTCTGGCGATGG
577 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC-TCTGACGATGCTCTGGCGATGG
* * * * * *
14360420 TGCCCCGACAAAGAAAAATGCGGCACCAGCACAAGACCGAGCCCAGCATGTGCTGCTGCAACCCT
641 TGCCCCGGCGAAGAAAAATGAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * * * *
14360485 TGGTCGGGTCCGATCTTAGATTGGCAATGAACTCCGCATGCTTGGACTGGGAATGAACTCCGTAT
706 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * *
14360550 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAAAGGGGCAGGATGCGCAAG
771 GCCTAAGTCAACCCACGAAACGAGCATCCGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCGCAAG
** * * * * *
14360615 CTTGGGATTGGCCGGGTCCCCCTCTTCGTGCTGCTGATCCTAATGCCGCAAACCTTCATTCGG
836 CCGGGGATTGGCCGGGTCCCCCTCTTCATGCTGCCGATCCTAATGCCACAAACCCTCAGTCGG
* *
14360678 TCTGATATTAGACTCAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGTGGACGGGCG
1 TCTGATCTTAGACTCAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGTGGGCGGGCG
*
14360743 GGCGGGCACTACGCCGGCGAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
66 GGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
14360808 GTTTAGGCACTTCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
131 GTTTAGGCACTTCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
14360873 GGTCCCTTAAGCCTTCACTTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
196 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* *
14360938 TGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAACTTGG
261 TGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
14361003 TAGACATGATCCTTGTGTTTTTCTTAGCATGCACAAAAAAATTCAGCTAAAAAATTGAAGTGTAC
325 TAGACATGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
14361068 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
390 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
14361133 ACCTGTAAAATCTCAGATTCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
455 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
14361198 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACTCCCCCCGGCCCCC
520 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCCCGGCCCCC
* * * * *
14361263 CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGGCGACGCTCCGACGATGGTGCCCCGG
584 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGATGCTCTGGCGATGGTGCCCCGG
* * * *
14361328 CGAAGAAAAATAAGGCACCAACACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTCCGA
649 CGAAGAAAAATGAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA
* * *
14361393 TCCAATCTTAGACTGGGAATGAAGTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGT
714 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
14361458 CAACCCACGAAATGAGCATCCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGAT
779 CAACCCACGAAACGAGCATCCGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGAT
** * ** * *
14361523 TGGTTGGGTCCCCCTTTTCATGCTGCCGATCCTGCTTCCAC-AACCCTCGGTCTGG
844 TGGCCGGGTCCCCCTCTTCATGCTGCCGATCCTAATGCCACAAACCCTCAGTC-GG
* * * * ** *
14361578 TCTGATCTTAGATTGC-GAATGAACTACATATGCCTAAGCCAACCGATGAAACAAATGGGCGGGC
1 TCTGATCTTAGACT-CAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGTGGGCGGGC
* * * *
14361642 GGGCGGGCACTACACCGGCCAAAGAGACAGGATGCGCAAGCTGTGGATCGATAGGATGGTAGGTG
65 GGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * * *
14361707 GGTTTAGGGACGTCTTCATATTTCTGCACGCCAATGCCATTTTTATGGCTAGTAAATTCACACAA
130 GGTTTAGGCACTTCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
14361772 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATTATTT
195 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
* *
14361837 TTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCGCCAAACTT
260 TTGAAACTTTTTACGGTTC-GGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* * *
14361902 GGTAGACGTGATCCTAGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
323 GGTAGACATGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* * *
14361967 ACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATTGCTACTGGCAGC
388 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * *
14362032 AAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTCGAGGTTTGATGAGAGATAGG
453 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* ** *
14362097 GGGCCAATATAAGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGCACA-CCCCCCATCCCT
518 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC
* * * * * *
14362161 TCGATCGTCGGAACCCCAATGCCGCCTGTCAGGTTCTTTGACTATGCTCTGGCAATGGTGCCGCG
583 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGATGCTCTGGCGATGGTGCCCCG
* *
14362226 GCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCATCATGTGCTGCCGCAACCCTCGGTCC-
648 GCGAAGAAAAATGAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
** * *
14362290 AGTGTGGTCTTAGACTGGGAATGAACTTCGTATGC
713 A-TCCGATCTTAGACTGGGAATGAACTCCGTATGC
14362325 CTAAGCCAAC
Statistics
Matches: 1480, Mismatches: 155, Indels: 27
0.89 0.09 0.02
Matches are distributed among these distances:
896 115 0.08
897 4 0.00
898 4 0.00
899 160 0.11
900 833 0.56
901 328 0.22
902 36 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
TCTGATCTTAGACTCAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGTGGGCGGGCG
GGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACTTCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
TGAAACTTTTTACGGTTCGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
AGACATGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCG
ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGATGCTCTGGCGATGGTGCCCCGGCG
AAGAAAAATGAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATC
CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
ACCCACGAAACGAGCATCCGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGATTG
GCCGGGTCCCCCTCTTCATGCTGCCGATCCTAATGCCACAAACCCTCAGTCGG
Found at i:14363026 original size:723 final size:723
Alignment explanation
Indices: 14361635--14363058 Score: 2217
Period size: 723 Copynumber: 2.0 Consensus size: 723
14361625 GAAACAAATG
* *
14361635 GGCGGGCGGGCGGGCACTACACCGGCCAAAGAGACAGGATGCGCAAGCTGTGGATCGATAGGATG
1 GGCGGGCGGGCGGGCACTACACCAGCCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGATG
* * *
14361700 GTAGGTGGGTTTAGGGACGTCTTCATATTTCTGCACGCCAATGCCATTTTTATGGCTAGTAAATT
66 GTAGGTGGGTTTAGGCACATCTTAATATTTCTGCACGCCAATGCCATTTTTATGGCTAGTAAATT
* * *
14361765 CACACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTC
131 CACACAATGGTCCCTTAAGCCTTCACATGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * *
14361830 ATTATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCGC
196 ATGATTTTTGAAACTTTTCACGGTTCGGGATTTTTTTAAAATTTTTTCGGAAAGAGTTTTGCCCC
* *
14361895 CAAACTTGGTAGACGTGATCCTAGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
261 CAAACTTGGTAGAAGTGATCCTACTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * *
14361960 GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATTGCTAC
326 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
14362025 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTCGAGGTTTGATGAG
391 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAG
* *
14362090 AGATAGGGGGCCAATATAAGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGCACACCCCCC
456 AGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* ** * * ** *
14362155 ATCCCTTCGATCGTCGGAACCCCAATGCCGCCTGTCAGGTTCTTTGACTATGCTCTGGCAATGGT
521 AGCCCCCCGATCGTCGGAAACCCAATGCCACCTGTCAGGTTCTCCGACGATGCTCTGGCAATGGT
* * * *
14362220 GCCGCGGCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCATCATGTGCTGCCGCAACCCTC
586 GCCCCGACGAAGAAAAATGTGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
** * * * *
14362285 GGTCCAGTGTGGTCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGGATACGAGTG
651 GGTCCAGTCCGATCTTAGACTAGGAATGAACTTCATATGCCGAAGCCAACCGACGGATACGAGTG
14362350 GTCAGGCA
716 GTCAGGCA
** * * * *
14362358 GGCGGGCGGGCGGGCACTATGCCAGCCAGAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTG
1 GGCGGGCGGGCGGGCACTACACCAGCCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGATG
* *
14362423 GTAGGTGGGTTTAGGCACATCTTAATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
66 GTAGGTGGGTTTAGGCACATCTTAATATTTCTGCACGCCAATGCCATTTTTATGGCTAGTAAATT
* *
14362488 CATACAATGGTCCCTTAAGCCTTCACATGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTT
131 CACACAATGGTCCCTTAAGCCTTCACATGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTC
*
14362553 ATGATTTTTGAAACTTTTCACGGTTCGGGA-TTTTTTAAAATTTTTTCGGAAAGATTTTTGCCCC
196 ATGATTTTTGAAACTTTTCACGGTTCGGGATTTTTTTAAAATTTTTTCGGAAAGAGTTTTGCCCC
*
14362617 CAAACTTGGTAGAAGTGATCCTTCTA-TTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
261 CAAACTTGGTAGAAGTGATCCTACTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
14362681 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
326 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
14362746 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTGAGGTTTGATGAG
391 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAG
*
14362811 -GCATAGGAGGCCAATATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAACCCC
456 AG-ATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCC
* * * *
14362875 CCGGGCCCCCCGATCGTTGGAAACCCAATGCCACC-GATCAGGTTCTCCGGCGATGCTCTGGCGA
519 CC-AGCCCCCCGATCGTCGGAAACCCAATGCCACCTG-TCAGGTTCTCCGACGATGCTCTGGCAA
*
14362939 TGGTGCCCCGACGAAGAAAAATGTGGCACCAGCAAATGTCCGAGCCCAGCATGTGCTGCCGCAAC
582 TGGTGCCCCGACGAAGAAAAATGTGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* *
14363004 CCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTTCATATGCCGAAGTCAACC
647 CCTCGGTCCAGTCCGATCTTAGACTAGGAATGAACTTCATATGCCGAAGCCAACC
14363059 CACGAAACGA
Statistics
Matches: 634, Mismatches: 63, Indels: 8
0.90 0.09 0.01
Matches are distributed among these distances:
720 1 0.00
721 214 0.34
722 60 0.09
723 359 0.57
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (723 bp):
GGCGGGCGGGCGGGCACTACACCAGCCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGATG
GTAGGTGGGTTTAGGCACATCTTAATATTTCTGCACGCCAATGCCATTTTTATGGCTAGTAAATT
CACACAATGGTCCCTTAAGCCTTCACATGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTC
ATGATTTTTGAAACTTTTCACGGTTCGGGATTTTTTTAAAATTTTTTCGGAAAGAGTTTTGCCCC
CAAACTTGGTAGAAGTGATCCTACTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAG
AGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
AGCCCCCCGATCGTCGGAAACCCAATGCCACCTGTCAGGTTCTCCGACGATGCTCTGGCAATGGT
GCCCCGACGAAGAAAAATGTGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
GGTCCAGTCCGATCTTAGACTAGGAATGAACTTCATATGCCGAAGCCAACCGACGGATACGAGTG
GTCAGGCA
Found at i:14364640 original size:26 final size:26
Alignment explanation
Indices: 14364604--14364656 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14364594 CTGGTCTGAT
14364604 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14364630 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14364656 C
1 C
14364657 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14365528 original size:26 final size:26
Alignment explanation
Indices: 14365499--14365551 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
14365489 CCGGTCCAAT
*
14365499 CTTAGATTGGGAATGAA-CTCCGTATG
1 CTTAGACTGGGAAT-AAGCTCCGTATG
14365525 CTTAGACTGGGAATAAGCTCCGTATG
1 CTTAGACTGGGAATAAGCTCCGTATG
14365551 C
1 C
14365552 CTAAGACAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 2 0.08
26 23 0.92
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAGCTCCGTATG
Found at i:14365704 original size:26 final size:26
Alignment explanation
Indices: 14365665--14365717 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14365655 CTGGTCCAAT
*
14365665 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14365691 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14365717 C
1 C
14365718 CTAAATCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14367459 original size:26 final size:26
Alignment explanation
Indices: 14367423--14367475 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14367413 CCAGTCTGAT
*
14367423 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAAACTGGGAACGAACTCCGTATG
*
14367449 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAACGAACTCCGTATG
14367475 C
1 C
14367476 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAAACTGGGAACGAACTCCGTATG
Found at i:14367677 original size:882 final size:860
Alignment explanation
Indices: 14365638--14367715 Score: 2543
Period size: 872 Copynumber: 2.4 Consensus size: 860
14365628 GCCGATCCTA
* *
14365638 CTGCCGCAACCCTCGGTCTGGTCCAATCTTATACTGGGAATGAACTCCGTATGCTTAGACTGTGA
1 CTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * *
14365703 ATGAACTCCGTATGCCTAAATCAACCCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG-TGGTGCTCAGCCGGCCAGAAGGG
* * ** * * * *
14365768 TGGGATGCGTAAGTCGGGGATCGGCCGGGTCCCCCTTTGCGTGCTACCGATCCTAC-AGTCGCAA
130 TGGGATGCGCAAGCCAAGGATCGGCCGGGTCCCCCTCTGCATGCTACCGATCCTGCTA-CCGCAA
* * * * *
14365832 CCCTCGGTCTGGTAAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCGATGAAACGA
194 CCCTCAGTCTGGTCAATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCAAACTGA-CAAA--A
* * *
14365897 GCGGGCGGGCGGGTGGGC-AGGCGCTGCGCCGGCCAGAGAGACAGGATGCGCAAGCCATGGATCG
255 -CGAGCGGGCGGGTGGGCGA-GCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCATGGATCG
* *
14365961 ATAGGCTGGTAGGTGGATTTAGGCACATCTTCATATTTCAGCAGGGAAATGCAATTTTTATGGCT
318 ATAGGCTGGTAGGTGGATTTAGGCAAATCTTCATATTTCAGCAGGCAAATGCAATTTTTATGGCT
* *
14366026 TGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
383 TGTAAAATCATACAACGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
14366091 TATTTTTCACGATTTTCAAAGCTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTT
448 TATTTTTCACGATTTTCAAAGCTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTT
*
14366156 TTCACCCCAAACTTGGTAAACGTCATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTA
513 TTCACCCCAAACTTGGTAAACGTCATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
14366221 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
578 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
* * *
14366286 TGGCTACTGGCGGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
643 TGGCGACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
14366351 TGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAAGTGTGCAC
708 TGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCA-CCAT---ACATC-A----G-AC
* * *
14366416 AGCCCCCTCGGCCCCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGATGATGGTA
763 AGCCCCCTCGGCCCCCCCAATCATCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGACGATGGTA
*
14366481 CCCCGGTGAGCACATGCTCGAGCCCAGCATGTG
828 CCCCGGTGAGCACATGCCCGAGCCCAGCATGTG
** * * * *
14366514 CTATCGTAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCTTATGCTTTGACTGGGA
1 CTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* *
14366579 ATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAGTCGGCCAGAAGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGT-GGTGCTCAGCCGGCCAGAAGGG
* * * * *** *
14366644 TGGGATGCCCAAGCCAAGGATCGACCAGGTCCCCCTCTACATGCTGTTGATCCTGCTGCCGCAAC
130 TGGGATGCGCAAGCCAAGGATCGGCCGGGTCCCCCTCTGCATGCTACCGATCCTGCTACCGCAAC
* * * * * * * *
14366709 CCTTATTCTGGTCCATTCTTAGACTGAAATGAACACCATATGCCTAAGCCAACTGACGAAACGAG
195 CCTCAGTCTGGT-CAATCTTAGACTGGAATGAACTCCGTATGCCTAAGCAAACTGACAAAACGAG
* * * * *
14366774 CGGGTGGGCGAGCGGGCACTACGCCGGCCAGAGAGAC-GGTATGCGCAAGCCGTGGATCGATAGG
259 CGGGCGGGTGGGCGAGCACTACGCCGGCCAGAGAGACAGG-ATGCGCAAGCCATGGATCGATAGG
* * * * * * *
14366838 GTGGTAGGTGGGTTTAGGCAAATCTTCATCTTTCTA-CATGCCAATGCCATTTTTGTGGCTTGTA
323 CTGGTAGGTGGATTTAGGCAAATCTTCATATTTC-AGCAGGCAAATGCAATTTTTATGGCTTGTA
* * * *
14366902 AAATCATACAACGGTGCC-TTATGCCTTCATGTGATGTTTCATGGCAAGATGACTCGTTTTCTAT
387 AAATCATACAACGGT-CCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* ** *
14366966 TTTTCACGATTTTTGAAA-CTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTCGGATGGAGTTTT
451 TTTTCACGA-TTTTCAAAGCTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* * *
14367030 CACCCCAAACTTTGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAAATTCAGCTAAA
515 CACCCCAAACTTGGTAAACGTCATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
14367094 AACTCGAAGTGTACAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
580 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATG
*
14367159 GCGACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
645 GCGACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
*
14367224 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-C-T-CATC-G-CA-CCCCC-CGGC
710 ATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCATACATCAGACAGCCCCCTCGGC
* *
14367282 CCCCCCAATCATCGGAACCCCAATGTCACCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGC
775 CCCCCCAATCATCGGAACCCCAATGT---C-GTC-GG---TCAGGT--T-CTCCGACGATGGTAC
*
14367347 CCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGTATGTG
829 CCC---G--G-----T---G----AGCACATGCCCGAGCCCAGCATGTG
* ** ** * *
14367396 CTGCCGCAACACTCGGTCCAGTCTGATCTTAGACTGGGAACGAACTCCGTATGCTTAAACTGGGA
1 CTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* *
14367461 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGATGGTGCTCAGCCGGCCAGAAGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG-TGGTGCTCAGCCGGCCAGAAGGG
* * * *
14367526 CGGGATGTGCAAGCCAAGGATCGGTCGGGT-CCCCTCTGCATGCTACCGATCCTGCTACCACAAC
130 TGGGATGCGCAAGCCAAGGATCGGCCGGGTCCCCCTCTGCATGCTACCGATCCTGCTACCGCAAC
* * *
14367590 CCTCAGTCCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCAAACTGACAAAACGA
195 CCTCAGTCTGGTC-AATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCAAACTGACAAAACGA
* * * *
14367655 GCGGGCAGGTGGGCGAGCACTACGCCGGCCAGAG-GGCAGGGTGTGCAAGCCGA-GGATCGAT
258 GCGGGCGGGTGGGCGAGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCC-ATGGATCGAT
14367716 CGGGTCCCCC
Statistics
Matches: 1023, Mismatches: 138, Indels: 77
0.83 0.11 0.06
Matches are distributed among these distances:
854 28 0.03
855 5 0.00
856 2 0.00
857 1 0.00
858 4 0.00
859 2 0.00
862 5 0.00
864 5 0.00
865 16 0.02
868 2 0.00
869 1 0.00
870 1 0.00
871 192 0.19
872 247 0.24
873 11 0.01
875 3 0.00
876 198 0.19
877 10 0.01
878 1 0.00
880 1 0.00
881 64 0.06
882 223 0.22
883 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (860 bp):
CTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGTGCTCAGCCGGCCAGAAGGGT
GGGATGCGCAAGCCAAGGATCGGCCGGGTCCCCCTCTGCATGCTACCGATCCTGCTACCGCAACC
CTCAGTCTGGTCAATCTTAGACTGGAATGAACTCCGTATGCCTAAGCAAACTGACAAAACGAGCG
GGCGGGTGGGCGAGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCATGGATCGATAGGCTG
GTAGGTGGATTTAGGCAAATCTTCATATTTCAGCAGGCAAATGCAATTTTTATGGCTTGTAAAAT
CATACAACGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
ACGATTTTCAAAGCTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTCACCCC
AAACTTGGTAAACGTCATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCGACT
GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
GATAGGGGACCAATATAAGGGCCAAGTACCAGCACCATACATCAGACAGCCCCCTCGGCCCCCCC
AATCATCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGACGATGGTACCCCGGTGAGCACATGCC
CGAGCCCAGCATGTG
Found at i:14367723 original size:165 final size:167
Alignment explanation
Indices: 14367512--14367817 Score: 413
Period size: 166 Copynumber: 1.8 Consensus size: 167
14367502 ATGGTGCTCA
* * *
14367512 GCCGGCCAGAAGGGCGGGATGTGCAAGCCAAGGATCGGTCGGGT-CCCCTCTGCATGCTAC-CGA
1 GCCGGCCAGAAGGGCGGGATGTGCAAGCCAAGGATCGATCGGGTCCCCCTATGCATACT-CTCGA
**
14367575 TCCTGCTACCACAACCCTCAGTCCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGC
65 TCCTGCTACCACAACCCTCAGTCCGATCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGC
*
14367640 AAACTGACAAAACGAGCGGGCAGGTGGGCGAGCACTAC
130 AAACCGACAAAACGAGCGGGCAGGTGGGCGAGCACTAC
* *
14367678 GCCGGCCAG-AGGGCAGGG-TGTGCAAGCCGAGGATCGATCGGGTCCCCCTATGCGTACTCTCGA
1 GCCGGCCAGAAGGGC-GGGATGTGCAAGCCAAGGATCGATCGGGTCCCCCTATGCATACTCTCGA
** ** * * * *
14367741 TCCTGCTACCACAACCCTTGGTTTGGTCCAATCTTAGACTGGGAGTGAACTCTGTATGCCTAAGC
65 TCCTGCTACCACAACCCTCAGTCCGATCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGC
*
14367806 CAACCGACAAAA
130 AAACCGACAAAA
14367818 TGAGTAGGCG
Statistics
Matches: 120, Mismatches: 17, Indels: 6
0.84 0.12 0.04
Matches are distributed among these distances:
165 29 0.24
166 91 0.76
ACGTcount: A:0.24, C:0.29, G:0.28, T:0.19
Consensus pattern (167 bp):
GCCGGCCAGAAGGGCGGGATGTGCAAGCCAAGGATCGATCGGGTCCCCCTATGCATACTCTCGAT
CCTGCTACCACAACCCTCAGTCCGATCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCA
AACCGACAAAACGAGCGGGCAGGTGGGCGAGCACTAC
Found at i:14370300 original size:26 final size:26
Alignment explanation
Indices: 14370271--14370323 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14370261 CCGGTCTGAT
14370271 CTTAGACTGAGAATCAACTCCGTATG
1 CTTAGACTGAGAATCAACTCCGTATG
* *
14370297 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATCAACTCCGTATG
14370323 C
1 C
14370324 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATCAACTCCGTATG
Found at i:14371148 original size:902 final size:902
Alignment explanation
Indices: 14367607--14380554 Score: 15887
Period size: 902 Copynumber: 14.5 Consensus size: 902
14367597 CCGATCTGAT
* ** * *
14367607 CTTAGACTAGGAATGAACTCCGTATGCCTAAG-CAAACTGACAAAACGAGCGGGCAGGTGGGCGA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC-AACCCACGAAACGAGCGTGC----GGGC--
* * * * * * *
14367671 GCACTACGCCGGCCAGA-GGGCAGGG-TGTGCAAGCCGAGGATCGATCGGGTCCCCCTATGCGTA
59 GCTC-A-GCCGGCCAGAGGGGC-GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATG
* * * * ** * * *
14367734 CTCTCGATCCTGCTACCACAACCCTTGGTTTGGTCCAATCTTAGACTGGGAGTGAACTCTGTATG
121 CTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATG
* * ** * * *
14367799 CCTAAGCCAACCGACAAAATGAGTAGGCGAGCAGGCCGGCGGGCACTACGTCGGCCAGAGAGACG
186 CCTAAGCCAACCGACGAAACGAGCGGGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* **
14367864 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATTTAAGCAT
250 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
**
14367929 GCCAATGCCATTTTTATCACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
315 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* ** * *
14367994 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTTGGGATTTTTT
380 ATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT
* * * *
14368059 AAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGC
445 AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGC
* *
14368124 ATGCACAAAAAAATTAAGGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGT
510 ATGCACAAAAAAATTCA-GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
*
14368189 GTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
574 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * *
14368254 CGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGCACCAGCAC
639 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
** * * * * * * * *
14368319 AGATCGTACATCATGAGCGCACACCCCCTCGG-CCCCCCGATCACTGAAACCCTAATGTCGTCGG
704 CCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGG
* * * *
14368383 TCAGGTTCTCTAGGC-ATGCACC-AGCGATGGTG-CCTCGGCGAAGAAAAATGCAGCACCAGCAC
768 TCAGGTTCTC-CGGCGATGCTCCGA-CGATGGTGCCCT-GACGAAGAAAAATGCGGCACCAGCAC
* * * * * * * *
14368445 ATGCCCGAGGCCACCATGTGCTGCCGTAACCCTCGGTACGATCCGATCTTAGACTAGGAATGAAC
830 ATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAAC
*
14368510 TCCGTACG
895 TCCGTATG
* * * *
14368518 CTTAGACTGGGAAGGAATTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14368583 CGGCCAGAGGGGCGGGATGTGTAAGCTGGGGATCGGTCGGGTCCACCACTGCATGCTATTGATTC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGA-TC
* * *
14368648 CTGCTGCCACATCCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14368713 ACCAACGAAATGAGCGGGCAGGCGTACGGGGGGGCGGGCGGGCACTACGCCTGCCAGAGAGACGG
195 ACCGACGAAACGAGCGGGC-GG-G--C-----GGCGGGCGGGCACTACGCCGGCCAGAGAGACGG
* * * ***
14368778 GATGCGCAAGCCGTGGATCGGTAGGGCGGTAGGTGAGTTTAGGCACATCTTCATATTTCTTTGTG
251 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* * * *
14368843 CCAATGCCATTTTTATGGCTTGCAAATTCATACAATCGTCCCGTAAGCCTTCATGTGAAGTTTCA
316 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
*
14368908 TGGCAAGAT-ACTCGTTTTCTATTTTTCACGATTTTAGAAACTTTTTGA-GGTTCGGGATTTTTT
381 TGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT-ACGGTTCGGGA-TTTTT
** *
14368971 TTGAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGG
444 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
* *
14369036 CATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGT
509 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * * *
14369101 GTCCCCATTTCAAACACTTTAGTGGCTAGTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAA
574 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
14369166 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACGAGCAC
639 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * **
14369231 CCATCGCACATCATGTGCGCACACCCCCC--ACCCCCCGATCGTCGGAAGCCTAAATTGCCGCCG
704 CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAA-CCCCAA-TGCCGCCG
** * * * *
14369294 GTCAGGTTCTCCGGTAATGCTCCGACGATGGTGCCCCGGCAAAGAAAAATACGGCACCAGCACAT
767 GTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACAT
* *
14369359 GCCCGAGCCCAACATGTGCTGCCGCAACCCT---T---G---G---TT----T--G---G---TC
832 GCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTC
14369400 CG-AT-
897 CGTATG
* *
14369404 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCGCGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * *
14369469 TGGCTAGAGGGGCAGGATGTGCAAGCCGGGGATCGATAGGGTCCCCTTTTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* * ** * *
14369534 TGCTGCCGCAACCCCCGATTTGGTCTGATCTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * *
14369599 TTGATGAAACGA----GC---AGACGGGCGGGCACTACG-CGGCCAGAGAGACGTGGATGCGCAA
196 CCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACG-GGATGCGCAA
*
14369656 -CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14369720 TTTTTATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCACATGAAGTTTCATGGCAAGAT
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
* ** * * * *
14369785 GACTCCTTTTCTATTTTTCACGATTTTCAAAAGTTTTTACAGTTTGGGATTTTTT-TAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * ** *
14369849 TGGAAGTAGTTTTGGCCCCAAACATATTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* ** *
14369914 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAACCTGTGCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14369979 AGACACTTTAATGGCTACTGGGAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
14370044 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGTACCCATCACACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
14370109 CATGTGCACACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACTGGTCAGGTTCTCCG
715 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * * * ** *
14370174 ACGATGCTCCGACGAGGGTGCCCCGATGAAGAAAAATACGGCACCAACACATGCCAAAGCCTAGC
780 GCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * *
14370239 ATGTGCTGTCGTAACCCTCGGTCCGGTCTGATCTTAGACTGAGAATCAACTCCGTATG
845 ATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
14370297 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGTGCGTACGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14370362 CGGCCAGAGGGGCGGGTTGCGCAAG-CGAGGGATTGGTCAGGTCCCCCTCTGCGTGCCGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCG-GGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATC
* * * * * *
14370426 CTACTGCTGTAACCCTCAGTCCGGTCTAATCTTAGACTAGGAATGAACTCCTTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
14370491 ACCGATGAAACGAGCGGGCGGGCGGACGGGCGAGCACTACGCTGGCCAGATAGACGGGAAGCACA
195 ACCGACGAAACGAGCGGGCGGGCGG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* **
14370556 AGCCTTTAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
14370621 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTCACATGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * **
14370686 TGACTCATTTTCTATTTTTCACGATTTTTGAAAGTTTTTACGGTTTC-AAATTTTTTAAAATTTT
389 TGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCGGGATTTTTTAAAATTTT
* * * *
14370750 TTTGGAAGTAGTTTTGGCCCCAAACTTGGAAGATGTGATCCTTGTATTTTTTTTGGCATGCACAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAA
* * *
14370815 AAAATTTCAGCTCAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * *
14370880 TCAAACACTTTAATGGCTAATGGCAGCAAATCTGTAAAATCTCTAATGCTCTTTAAGGGGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14370945 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCGGTACCTATCACAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
14371010 ATCATGCGCGCACACCCCCCGG-CCCCCCAATCACCGGAACCCCAATGTCGCCGGTCAGGTTCTG
713 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * * *
14371074 CGGTGATGCTCTGGCGATGGTGCCCTAACGAAGAAAAATGTGGCACCAGCACATACCCGAGCCTA
778 CGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
** * * * *
14371139 GTGTGTGCTGCCGCAACCCTCGGTCTGGTCTGAGCTTAGACTGGGAATGAACTCCGTAAG
843 GCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * **
14371199 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCTCGAAACAAGCGTGGGGGCGCTCAAT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * **
14371264 CGGCCAGAGGGGTGGGATGCACAAGCCGAGGATCGGTCGGGT-CCCCTCTGCATGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* * * * * * *
14371328 TGCTACCACAACCCTCAGTCCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCAAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14371393 CCGACAAAACGAGTGGGC---AGGTGGGCGAGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
196 CCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * * * *
14371455 CCGTGGATCGATAGAGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTACATGCCAGTTCCCT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
** *
14371520 TTTTATGGCTTCCAAATTCATACAATGGTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGATG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATG
* * ** * **
14371585 ACTCGTTTTCTAATTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTTTGAATTTTTT
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTT
* * * *
14371650 CGGAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAAAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
*
14371715 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
14371780 AGACACTTTATTGGCTACTGGTAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* **
14371845 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAAGTATGAGCACCCATCGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * * * *
14371910 CATGCGCGCACATCCCCC--ACACCCCGATCGCTGAAAGCCCAATGCCACCGGTCAGGTTCTCCG
715 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** *
14371973 GCGATGCTCTGACGATGGTG-CCTCGGTGAAGAAAAATGCGGCACCCGCACATGCCCGAGCCCAG
780 GCGATGCTCCGACGATGGTGCCCT-GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
*
14372037 CATGTGCTGTTGCAACCCT---T---G---G----T---CT--G---G---TCCG-AT-
844 CATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *** * * *
14372070 CTTAGACTGGGAATGAACTCCGTATGCGTAAGTCAACCTGTGAAATGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * **
14372135 CGGCCAAAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCTTTTGTGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* ** * *
14372200 TGCTGCCGCAACCCTCAGTTTGGTTTGAATCTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGGTCT-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
14372265 ATCGATGAAAC-A---AGC---AGG-TGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
195 ACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14372322 ACCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14372387 TTTTTATGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAT
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
* * * * *
14372452 GACTCCTTTTCTATTTTTCATGATTTTTGAAAGTTTTTACGGTTCGAGATCTTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* *
14372517 CGGAAGGAGTTTTGG--CCAAACTTGGAAGACGTGATCCTTGTATTTATTTTGGCATGCACAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* ** *
14372580 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAACCTGTCCCTATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * * *
14372645 GGACACTTTAATGGCTATTGGGAGCAAACCTCTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * * *
14372710 TTCTCAAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGTACCCATCACACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
14372775 CATGTGCACACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCTGGTTAGGTTCTCC
715 CATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * * *
14372840 GACGATGCTCCGACGAGGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCGGA-CCGCA
779 GGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC-CA
* * * *
14372904 GCATGTGCTGTCGCAACCCTCGGTCCGTTCTGATCTTAGA-TCGAGAATCAACTCTGTATG
843 GCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACT-GGGAATGAACTCCGTATG
* * * *
14372964 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGATCATGCGGGCACTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * *
14373029 CGGCCAGAAGGGCGGGATGCGCAAGCCAGGGATTGGTTAGGTCCCCCTCTGCGTGCCGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* * * * * ** *
14373094 TACTGCTGTAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCTATATACCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * * * * *
14373159 CCGATTAAATGAGCAGGCGGGCGGACAGGCGGTCACTACACCGGCCAGATAGACGGGAAGCGCAA
196 CCGACGAAACGAGCGGGCGGGCGG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* ** *
14373224 GCCTTTAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * *
14373289 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAGGGCTTCACATGAAGTTTCATGGCAAGAT
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
* *
14373354 GACTCATTTTCTATTTTTCACGATTTTTGAAAGTTTTTACGGTTTC-GGATTTTTTAAAATTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCGGGATTTTTTAAAATTTTT
* * * *
14373418 TTGGAAGTAGTTTTGGCCCCAAACTTGG-AGGATGTGATCCTTTTATTTTTTTTGGCATGCACAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTA-GACGTGATCCTTGTATTTTTTTTGGCATGCACAA
**
14373482 AAACTTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
14373547 TCAGACACTTTAATGGCTAATGGCAGCAAACCTGTAAAATCTCTAATGCTCTTTAAGGGGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14373612 AGTTCTTGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAGGTACCGGCACCCATCGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * ** * *
14373677 ATCATGCGCGCACACCCCCCCGG-CCCCCCAATCACCGGAACCCCAAAGTTGCCAGACAGGTTCT
713 ATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * * * * *
14373741 CCGGTGATGCTCTGGCGATGGTGCCCTGACGAAAAAAAATGTGGCACCAGCAAATGCCCGAGCCC
777 CCGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
** * * **
14373806 AGTGTGTTCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
842 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
*
14373867 CTTAGACTGCGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAG-GGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT-GCGGGCGCTCAG
* **
14373931 CCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATC
* * * * * *
14373996 TTGCTGCCACAACCCTCGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCAA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
14374061 ACCGACAAAATGAGCGGGC---AGGCGGGCGAGCACTACGCCGGCCAGAGAGGCGGGATGCACAA
195 ACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14374123 GCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGCATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
14374188 TTTTTCTGGCTTGCAAATTCATACAATGGTCTCTTAGGCCTTCACGTGAAGTTTCATGGCAAGAT
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
* ** * **
14374253 GACTCGTTTTCTAATTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTTTTGAATTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA--TTTTTTAAAATTTT
* *
14374318 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAA
14374383 AAAAATTCAGCTAAAAACTCGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
518 AAAAATTCAGCTAAAAACTC-GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
14374448 TTCAGACACTTTAATGGCTACTGGCGGCAAACCTGTAAAATCTTAAATGCTCTTCAAGGGCGTGT
582 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
14374513 GAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * *
14374578 -ATCATATGCGAACAACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
712 CATCATGTGCGCAC-ACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
** * * * * * *
14374642 TCCAACGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATGCGGCACCCGCAGAAGCCTGAGCC
776 TCCGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * * * * *
14374707 CAGCATGTTCTG-CTGCAACCCTCAGTCTGATCCGTTCTTAGATTTGGAATGAACTCCGTATG
841 CAGCATGTGCTGTC-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * **
14374769 CTTAGAATGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAAAAAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
14374834 TGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* *
14374899 TGCTGCCACAAACCTCGGTCCGGT-TCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGGTCT-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * *
14374963 ACCGATGAAACGAGCGACCGGGCGTGCGGGCGGGCACTGCGCCGGCCAAAGAGACGGGATGCACA
195 ACCGACGAAACGAGCGGGCGGGCG-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * ***
14375028 AGCCATGGATCGATAGGGTGGTAGGTGGGCTTAGGCACATCTTCATATTTCAATATGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
14375093 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAGGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
14375158 CGACTCGTTTTCTATTTTTTACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
389 TGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * *
14375223 TCGGAAGGAATTTTGGCCCTAAACTTGGTAGACATGATTCTTGTATTTTTTTTGGTATGCACAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* *
14375288 AAGATTCAGCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
14375353 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
14375418 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* **
14375483 TCATGTGCGTACATCCCCCCCGGCCCCGCCCGATCGTTGGAACCCCAATGCCGCCGGTCAGGTTC
714 TCATGTGCGCACA--CCCCCCGGCCCC-CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* ** * * * ** * *
14375548 TCTGGCGATGCTCCGGTGATGGTGCCCTGATGAAGAAATACGTAGCTCCAACACATGCCCGAGCC
776 TCCGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* ** * * * * * * *
14375613 CAGCATGTGCTGTTGCAACCCTCAATCCAGTCCGATCTTAGAATTGGAAGGAACTCTGTATT
841 CAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * **
14375675 CTTAGACTGGGAATGAACTCTGTATTCCTAAGTCAACCCACGAAACGAGTGTACGGATGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14375740 CGGCCAGAGGGGTGGGATACGCAAGCCGGGGATCGATCGGGTCCCTCTCTGCATGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* * * * *
14375805 TGCTTCCACAACCCTCGGTCCGGTTTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* ** * * * **
14375870 CTGACGAAACGAGC--G-GGTAGGCGGGCGGACACTACGTCGGCCAAAGAGACGGGATGCATAAG
196 CCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * ** *
14375932 CCGTGGATCCG-TAGGGTGGTAAGTGGGTTCAGGCACATCTTTATATTTCTGTGTCCCAATGCCA
261 CCGTGGAT-CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14375996 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTAACGTGAAGTTTTATGGCAAGAT
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
* * *
14376061 GACTCGTTTTCTCTTTTTCACGATTTTTGAAACTTTTTA-GGTTTGGGATGTTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * **
14376125 CGGAAGGAGTTTTTGCACCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTCACATGCACAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
*
14376190 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14376255 AGACACTTTAATGGCTACTGGGTAGCAAACCTGTAACATCTCAAATGCTCTTTAAGGGGGTGTGA
585 AGACACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
14376320 GTTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *** * * * *
14376385 TCATGTGCGCACACCCCCTGGCCCCCCCGATCGTTAGAACCCTAATGCCGCTGGTTAGGTTCCCC
714 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * *
14376450 GCGTGATGCTCCGACGATGGTG-CCTCGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCC
779 G-GCGATGCTCCGACGATGGTGCCCT-GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * *
14376514 AGCATGTGCTGTCGCAACCCTCGATCCAGTATGATCTTAGACTGGGAATGAACTCCGCATG
842 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
14376575 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14376640 CGGCCAGAGTGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* ** * * *
14376705 TACTATCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14376770 CTGACGAAACGAGCGGACGGGCAGGCAGGCGGGCGGGCACTACGTCGGCAAAAGAGACGGGATGC
196 CCGACGAAACGA---G-CGGGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* *
14376835 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTTATATTTCTGCATGCCAAT
256 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
*
14376900 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAACCCTTCACGTGAAGTTTCATGGCA
321 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * *
14376965 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGTGATTTTTTAAAATT
386 AGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
** * * * *
14377030 TTTTCGGAAGGAGTTTTTTCCACAAACTTGGTAGACGTGATCCTTGTA-GTTTGTTGACATGCAC
451 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC
* *
14377094 AAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTCCCCA
516 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
*
14377159 TTTCAGACACTTTAATGGCTACTAGCCA-CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
581 TTTCAGACACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
14377223 GTGAGTTCTGGAGGTTTGATAAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCG
645 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *
14377288 CACATCATGTGCGCACACCCCCCGGTCCTCCCGATCACCGAAACCCTAATGCCGCCGGTTAGGTT
710 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * * ** *
14377353 CTCCGGCGATGC-CCTGGCGATGATGCCCCGGCAAAGAAAAATGCGGCACCAAAACTTGCCCGAG
775 CTCCGGCGATGCTCC-GACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * *
14377417 CCTAGCATGTGCTGCCGCAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
839 CCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14377481 CTTAGATTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCATGCAGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** **
14377546 CGGCCAGAGGGACGGAATGGGCAAGTCGGGGATCAATCGGGTCCCCCTCTGCATGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
*** * * *
14377611 TGCTATTGTAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14377676 CCGACGAAAC-A---AGC---AGGTGGGCGGGCACTACGTCGCCCAGAGAGACGGGATGCACAAG
196 CCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * ** *
14377734 CCTTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATACCAT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* *
14377799 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATG
* * *
14377864 ACTCGTTTTCTATTTTTTAGGATTTTTGAAACTTTTTACGGTTCGGGATTTTGTAAAATTTTTTC
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * * *
14377929 GGAAAGAGTTTTGGCCCCAAACCTGGTAGACATCATCCTTGTATTTTTGTTGGCACGCATAAAAA
456 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
* * * * * *
14377994 AATTTAGCTAAATACTAGAAGTGTACAAGATTTTATGACAATTTGAAAAAAGTGTCCGCATTTCA
521 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
14378059 AACACTTTAATGGCTACTGGTAGCAAAACTGTAAAATCTCAAATGCTCTTTAA-AGGGTGTGAGT
586 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
14378123 TCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATC
651 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * ** *
14378188 ATGTGCGCACACCCCCTGGCCCCCCCGATCACCGGAACCCCAATGCCGCAAGTCAGGTTCTCCGA
716 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * * * *
14378253 CAATGCTCCGTCGATGGTGCCCTAACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGTA
781 CGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * *
14378318 TGTGCTGCCACAACCATCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATT
846 TGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * **
14378375 TTTAGACTGGGAATGAACTCCGTATCCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCTCAAT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** *
14378440 CTGCCAGAGGGACGGGATGCGTAAGTCGGGGATCGGCCGCCTCCCCCTCTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
** * * * * * * *
14378505 TGCTGCTACAACCTTCAGTCTGATCCAATCATAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14378570 TCGATGAAACGA----GC--G-GGCGGGCAGGCACTATGCCGACCAGAGAGACGGGATGCACAAG
196 CCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
*
14378628 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCAT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* * *
14378693 TTTTATGGCTTGTAATTTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATG
* * * *
14378758 ACTCATTTCCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTT
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * *
14378823 GGAAGGGGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTA-G-ACAAAAA
456 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC-AAAA
*
14378886 AAATTCAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
14378951 AGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATATCAAATGCTTTTTAAGAGGGTGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
14379016 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACGT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
14379081 CATGTGCACACACCCCCCTGAG-CCCCCCGATCGTCAGAGCCCCAATGCCACCGGTTAGGTTCT-
715 CATGTGCGCACACCCCCC-G-GCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * *
14379144 C--CGA-----CGAC---GGTGCCCCGACGAAGAAAAATACCGCACCAACACATGCCTGAGCCCA
778 CGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* *
14379199 GCATCTGCTATCGCAACCCTCGGTCC-G---G----T---CT--G-AT---CT-C--A--
843 GCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14379237 ---A-ACTGGGAATGAACTCCTTATGCCTAAGTCAACCCACAAAACGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * ** * *
14379298 CGGCTAGAGGGGCGAGATGCACAAGTCGGGGATCGGTCGGGTTCCCTTCTGCGCGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
* * *
14379363 TGCTGCCGCAACCCTCGGTCCAGTCCAATCTTAGACTGGGAATGAACTCCTTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
14379428 CCGATGAAATGAGCAGGCAGACAGGCGGGCGGGTACTACGCCAGCTAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGGGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
14379493 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACTTCTTCATATTTCTGCATACCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * *
14379558 TTTTTATTGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
* *
14379623 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCTGGATTTTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * * * * *
14379688 CGGATGGAGTTTTGGCCGCAAAGTTGATAGACGTGATCCTCGTA-TTTTTTTGGAATGCATAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* *
14379752 AAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14379817 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
14379882 TTCTCGAGGTTTGGTGAGGGATAGGGGGCTAATATAAGTGCCAAGTACCAGCACCCATTGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * * * * *
14379947 CCTGTGCTTACACCCCCCGGCCCTCCTGATCGCTGGAACCCCAATGCCGCTGGTCAGGTTCTACG
715 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** * * *
14380012 ACGATGCTCCGGTGATGGTGCCC-GACGAAGAAAAATGTGGCACCAACACATGCTCGAGCCCAGC
780 GCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * *
14380076 ATGTGCTGTCGCAACCTTCAGACCGGTCCGATCTTAGATTGGGAATGAACTCCGTATG
845 ATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14380134 CTTAGACAGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAACGAGTGTGCTGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
14380199 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCT-TCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTC-GATC
* * * * * * ** *
14380263 CTTCTACCGTAACTCTCCGTCTGGTCCCATCTTAGACTGGGAATGAACTCCGTATGACTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** *** * * * * * *
14380328 ACCGACAAAATAAAAAGAC--G-AGCAGGCGGGTAGTACGCCGGCTAGAGAGACGGGATGCGCAA
195 ACCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *** *
14380390 GCCGTGGATCGATAGGCTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCTAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14380455 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAT
*
14380520 GACTCGTTTTCTATTTTTCACGATTTTGGAAACTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
14380555 GGTAGACATG
Statistics
Matches: 10434, Mismatches: 1390, Indels: 440
0.85 0.11 0.04
Matches are distributed among these distances:
858 168 0.02
859 1 0.00
862 2 0.00
864 2 0.00
865 269 0.03
866 462 0.04
867 381 0.04
868 445 0.04
869 90 0.01
870 3 0.00
871 93 0.01
872 38 0.00
873 51 0.00
875 55 0.01
876 11 0.00
877 1 0.00
879 4 0.00
880 1 0.00
881 5 0.00
883 4 0.00
884 59 0.01
885 69 0.01
886 109 0.01
887 4 0.00
888 6 0.00
889 2 0.00
891 6 0.00
892 12 0.00
893 328 0.03
894 1146 0.11
895 158 0.02
896 8 0.00
897 483 0.05
898 270 0.03
899 229 0.02
900 300 0.03
901 549 0.05
902 1426 0.14
903 776 0.07
904 379 0.04
905 92 0.01
906 796 0.08
907 167 0.02
908 292 0.03
909 65 0.01
910 13 0.00
911 51 0.00
912 316 0.03
913 237 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (902 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
TGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATG
ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
CGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
TGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:14371207 original size:26 final size:26
Alignment explanation
Indices: 14371171--14371222 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
14371161 GTCTGGTCTG
14371171 AGCTTAGACTGGGAATGAACTCCGTA
1 AGCTTAGACTGGGAATGAACTCCGTA
14371197 AGCTTAGACTGGGAATGAACTCCGTA
1 AGCTTAGACTGGGAATGAACTCCGTA
14371223 TGCCTAAGTC
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.31, C:0.19, G:0.27, T:0.23
Consensus pattern (26 bp):
AGCTTAGACTGGGAATGAACTCCGTA
Found at i:14373870 original size:26 final size:26
Alignment explanation
Indices: 14373841--14373893 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14373831 CCGGTCCAAT
*
14373841 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
14373867 CTTAGACTGCGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
14373893 C
1 C
14373894 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATG
Found at i:14374773 original size:26 final size:26
Alignment explanation
Indices: 14374743--14374795 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14374733 CTGATCCGTT
* *
14374743 CTTAGATTTGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
*
14374769 CTTAGAATGGGAATGAACTCTGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14374795 C
1 C
14374796 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:14375687 original size:26 final size:26
Alignment explanation
Indices: 14375648--14375701 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
14375638 TCCAGTCCGA
*
14375648 TCTTAGAATTGGAAGGAACTCTGTAT
1 TCTTAGAATGGGAAGGAACTCTGTAT
* *
14375674 TCTTAGACTGGGAATGAACTCTGTAT
1 TCTTAGAATGGGAAGGAACTCTGTAT
14375700 TC
1 TC
14375702 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.22, T:0.35
Consensus pattern (26 bp):
TCTTAGAATGGGAAGGAACTCTGTAT
Found at i:14376585 original size:26 final size:26
Alignment explanation
Indices: 14376549--14376601 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14376539 CCAGTATGAT
14376549 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
*
14376575 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
14376601 C
1 C
14376602 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:14377491 original size:26 final size:26
Alignment explanation
Indices: 14377455--14377507 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14377445 CCAGTCTGAT
14377455 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
14377481 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14377507 C
1 C
14377508 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14377868 original size:894 final size:895
Alignment explanation
Indices: 14372070--14380554 Score: 10719
Period size: 894 Copynumber: 9.5 Consensus size: 895
14372060 CTGGTCCGAT
* *** * * *
14372070 CTTAGACTGGGAATGAACTCCGTATGCGTAAGTCAACCTGTGAAATGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * ** *
14372135 CGGCCAAAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCTTTTGTGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* ** ** *
14372200 TGCTGCCGCAACCCTCAGTTTGGTTTGAATCTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGG-TCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * *
14372265 ATCGATGAAACAAGCAGG-TGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAACCATGG
195 ACCGACGAAACAAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGG
14372329 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
* * * *
14372394 GACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGATGACTCCT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * *
14372459 TTTCTATTTTTCATGATTTTTGAAAGTTTTTACGGTTCGAGATCTTTTAAAATTTTTTCGGAAGG
390 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* *
14372524 AGTTTTGG--CCAAACTTGGAAGACGTGATCCTTGTATTTATTTTGGCATGCACAAAAAAATTCA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCA
* ** * *
14372587 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAACCTGTCCCTATTTCGGACACT
520 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * * *
14372652 TTAATGGCTATTGGGAGCAAACCTCTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTCAA
585 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * * *
14372717 AGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGTACCCATCACACATCATGTGC
650 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * *
14372782 ACACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCTGGTTAGGTTCTCCGACGATG
715 GCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
* * * *
14372847 CTCCGACGAGGGTGCCCCGATGAAGAAAAATGCGGCACCAACACATGCCGGA-CCGCAGCATGTG
779 CTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCC-CAGCATGTG
* * * * *
14372911 CTGTCGCAACCCTCGGTCC-GTTCTGATCTTAGA-TCGAGAATCAACTCTGTATG
843 CTGTCGCAACCCTCGATCCAG-TCCGATCTTAGACT-GGGAATGAACTCCGTATG
* * * *
14372964 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGATCATGCGGGCACTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * *
14373029 CGGCCAGAAGGGCGGGATGCGCAAGCCAGGGATTGGTTAGGTCCCCCTCTGCGTGCCGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * ** * ** *
14373094 TACTGCTGTAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCTATATACCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** ** * * * *
14373159 CCGATTAAATGAGCAGGCGGGCGGACAGGCGGTCACTACACCGGCCAGATAGACGGGAAGCGCAA
196 CCGACGAAACAAGCAGGC--G-GG-C--G-GG-CACTACGCCGGCCAGAGAGACGGGATGCACAA
* ** *
14373224 GCCTTTAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
14373289 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAGGGCTTCACATGAAGTTTCATGGCAAGAT
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
14373354 GACTCATTTTCTATTTTTCACGATTTTTGAAAGTTTTTACGGTTTC-GGATTTTTTAAAATTTTT
383 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCGGGATTTTTTAAAATTTTT
* * * *
14373418 TTGGAAGTAGTTTTGGCCCCAAACTTGG-AGGATGTGATCCTTTTATTTTTTTTGGCATGCACAA
447 TCGGAAGGAGTTTTGGCCCCAAACTTGGTA-GACGTGATCCTTGTATTTTTTTTGGCATGCACAA
**
14373482 AAACTTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
511 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
14373547 TCAGACACTTTAATGGCTAATGGCAGCAAACCTGTAAAATCTCTAATGCTCTTTAAGGGGGTGTG
576 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14373612 AGTTCTTGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAGGTACCGGCACCCATCGCAC
641 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * ** * *
14373677 ATCATGCGCGCACACCCCCCCGG-CCCCCCAATCACCGGAACCCCAAAGTTGCCAGACAGGTTCT
706 ATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
** * * * * * *
14373741 CCGGTGATGCTCTGGCGATGGTGCCCTGACGAAAAAAAATGTGGCACCAGCAAATGCCCGAGCCC
770 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCC
** * * * * *
14373806 AGTGTGTTCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
835 AGCATGTGCTGTCGCAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
14373867 CTTAGACTGCGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAG-GGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT-GCGGGCGCTCAG
* *
14373931 CCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATC
* * * ** * *
14373996 TTGCTGCCACAACCCTCGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCAA
130 CTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * *
14374061 ACCGACAAAATGAGCGGGCAGGCGGGCGAGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCC
195 ACCGAC-GAA--A-CAAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCC
* *
14374126 GTGGATCGATAGAGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGCATGCCAATGCCATTT
256 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * * * *
14374191 TTCTGGCTTGCAAATTCATACAATGGTCTCTTAGGCCTTCACGTGAAGTTTCATGGCAAGATGAC
321 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * **
14374256 TCGTTTTCTAATTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTTTTGAATTTTTTC
386 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA--TTTTTTAAAATTTTTTC
* *
14374321 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
449 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
14374386 AATTCAGCTAAAAACTCGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
514 AATTCAGCTAAAAACTC-GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
14374451 AGACACTTTAATGGCTACTGGCGGCAAACCTGTAAAATCTTAAATGCTCTTCAAGGGCGTGTGAG
578 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
14374516 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA-AT
643 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
14374580 CATATGCGAACAACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
708 CATGTGCGCAC-ACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * ** * * *
14374645 AACGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATGCGGCACCCGCAGAAGCCTGAGCCCAG
772 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAG
* * * * *
14374710 CATGTTCTG-CTGCAACCCTC-AGT-CTGATCCGTTCTTAGATTTGGAATGAACTCCGTATG
837 CATGTGCTGTC-GCAACCCTCGA-TCCAG-TCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * **
14374769 CTTAGAATGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAAAAAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
14374834 TGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * *
14374899 TGCTGCCACAAACCTCGGTCCGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14374964 CCGATGAAACGAGCGACCGGGCGTGCGGGCGGGCACTGCGCCGGCCAAAGAGACGGGATGCACAA
196 CCGACGAAACAAGC-A------G-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAA
* * ***
14375029 GCCATGGATCGATAGGGTGGTAGGTGGGCTTAGGCACATCTTCATATTTCAATATGCCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14375094 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAGGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
14375159 GACTCGTTTTCTATTTTTTACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
383 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * * *
14375224 CGGAAGGAATTTTGGCCCTAAACTTGGTAGACATGATTCTTGTATTTTTTTTGGTATGCACAAAA
448 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* * *
14375289 AGATTCAGCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
513 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14375354 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAG
578 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
14375419 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
643 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* **
14375484 CATGTGCGTACATCCCCCCCGGCCCCGCCCGATCGTTGGAACCCCAATGCCGCCGGTCAGGTTCT
708 CATGTGCGCACA--CCCCCCGGCCCC-CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * ** * * * * * *
14375549 CTGGCGATGCTCCGGTGATGGTGCCCTGATGAAGAAATACGTAGCTCCAACACATGCCCGAGCCC
770 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCC
* * * * * * *
14375614 AGCATGTGCTGTTGCAACCCTCAATCCAGTCCGATCTTAGAATTGGAAGGAACTCTGTATT
835 AGCATGTGCTGTCGCAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * **
14375675 CTTAGACTGGGAATGAACTCTGTATTCCTAAGTCAACCCACGAAACGAGTGTACGGATGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
14375740 CGGCCAGAGGGGTGGGATACGCAAGCCGGGGATCGATCGGGTCCCTCTCTGCATGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * *** *
14375805 TGCTTCCACAACCCTCGGTCCGGTTTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14375870 CTGACGAAACGAGCGGGTAGGCGGGCGGACACTACGTCGGCCAAAGAGACGGGATGCATAAGCCG
196 CCGACGAAACAAGC----AGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCG
* * * ** *
14375935 TGGATCCG-TAGGGTGGTAAGTGGGTTCAGGCACATCTTTATATTTCTGTGTCCCAATGCCATTT
257 TGGAT-CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * *
14375999 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTAACGTGAAGTTTTATGGCAAGATGAC
321 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14376064 TCGTTTTCTCTTTTTCACGATTTTTGAAACTTTTTA-GGTTTGGGATGTTTTAAAATTTTTTCGG
386 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * **
14376128 AAGGAGTTTTTGCACCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTCACATGCACAAAAAAA
451 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
*
14376193 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTTCAGA
516 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14376258 CACTTTAATGGCTACTGGGTAGCAAACCTGTAACATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
581 CACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
14376323 CTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
645 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *** * * * *
14376388 TGTGCGCACACCCCCTGGCCCCCCCGATCGTTAGAACCCTAATGCCGCTGGTTAGGTTCCCCG-C
710 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * *
14376452 GTGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGC
775 --GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGC
** *
14376517 ATGTGCTGTCGCAACCCTCGATCCAGTATGATCTTAGACTGGGAATGAACTCCGCATG
838 ATGTGCTGTCGCAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14376575 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * **
14376640 CGGCCAGAGTGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* ** * *
14376705 TACTATCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14376770 CTGACGAAACGAGCGGACGGGCAGGCAGGCGGGCGGGCACTACGTCGGCAAAAGAGACGGGATGC
196 CCGACG-AA--A-C--A-----A-GCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * *
14376835 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTTATATTTCTGCATGCCAAT
249 ACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
*
14376900 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAACCCTTCACGTGAAGTTTCATGGCA
314 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* *
14376965 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGTGATTTTTTAAAATT
379 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
** * * * *
14377030 TTTTCGGAAGGAGTTTTTTCCACAAACTTGGTAGACGTGATCCTTGTA-GTTTGTTGACATGCAC
444 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC
* *
14377094 AAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTCCCCA
509 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
*
14377159 TTTCAGACACTTTAATGGCTACTAGCCA-CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
574 TTTCAGACACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
14377223 GTGAGTTCTGGAGGTTTGATAAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCG
638 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *
14377288 CACATCATGTGCGCACACCCCCCGGTCCTCCCGATCACCGAAACCCTAATGCCGCCGGTTAGGTT
703 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * * * * *
14377353 CTCCGGCGATGC-CCTGGCGATGATGCCCCGGCAAAGAAAAATGCGGCACCAAAACTTGCCCGAG
768 CTCCGACGATGCTCC-GACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAG
* * *
14377417 CCTAGCATGTGCTGCCGCAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
832 CCCAGCATGTGCTGTCGCAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14377481 CTTAGATTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCATGCAGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** *
14377546 CGGCCAGAGGGACGGAATGGGCAAGTCGGGGATCAATCGGGTCCCCCTCTGCATGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
*** * *
14377611 TGCTATTGTAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14377676 CCGACGAAACAAGCAGGTGGGCGGGCACTACGTCGCCCAGAGAGACGGGATGCACAAGCCTTGGA
196 CCGACGAAACAAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGA
* ** *
14377741 TCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATACCATTTTTATG
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
*
14377806 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTT
326 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
14377871 TTCTATTTTTTAGGATTTTTGAAACTTTTTACGGTTCGGGATTTTGTAAAATTTTTTCGGAAAGA
391 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* * * * * * *
14377936 GTTTTGGCCCCAAACCTGGTAGACATCATCCTTGTATTTTTGTTGGCACGCATAAAAAAATTTAG
456 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
* * * * * *
14378001 CTAAATACTAGAAGTGTACAAGATTTTATGACAATTTGAAAAAAGTGTCCGCATTTCAAACACTT
521 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * *
14378066 TAATGGCTACTGGTAGCAAAACTGTAAAATCTCAAATGCTCTTTAA-AGGGTGTGAGTTCTCGAG
586 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
14378130 GTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCG
651 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * ** *
14378195 CACACCCCCTGGCCCCCCCGATCACCGGAACCCCAATGCCGCAAGTCAGGTTCTCCGACAATGCT
716 CACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT
* ** * * *
14378260 CCGTCGATGGTGCCCTAACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGTATGTGCTG
781 CCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
* * * * ** * *
14378325 CCACAACCATCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATT
846 TCGCAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * **
14378375 TTTAGACTGGGAATGAACTCCGTATCCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCTCAAT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * **
14378440 CTGCCAGAGGGACGGGATGCGTAAGTCGGGGATCGGCCGCCTCCCCCTCTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
** * * * * * *
14378505 TGCTGCTACAACCTTCAGTCTGATCCAATCATAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
14378570 TCGATGAAACGAGCGGGCGGGCAGGCACTATGCCGACCAGAGAGACGGGATGCACAAGCCGTGGA
196 CCGACGAAACAAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGA
*
14378635 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCATTTTTATG
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* * *
14378700 GCTTGTAATTTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATT
326 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
14378765 TCCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTTGGAAGGG
391 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* *
14378830 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTA-G-ACAAAAAAAATTCA
456 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC-AAAAAAATTCA
*
14378893 GCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
520 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * * *
14378958 TTAATGGCTATTGGCAGCAAACCTGTAAAATATCAAATGCTTTTTAAGAGGGTGTGAGTTCTCAA
585 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* *
14379023 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACGTCATGTGC
650 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * *
14379088 ACACACCCCCCTGAG-CCCCCCGATCGTCAGAGCCCCAATGCCACCGGTTAGGTTCT-C--CGA-
715 GCACACCCCCC-G-GCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
*** * *
14379148 ----CGAC---GGTGCCCCGACGAAGAAAAATACCGCACCAACACATGCCTGAGCCCAGCATCTG
778 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGCATGTG
* *
14379206 CTATCGCAACCCTCG-----GTCCG------GTCT--G-AT---CT-C--A--
843 CTGTCGCAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14379237 ---A-ACTGGGAATGAACTCCTTATGCCTAAGTCAACCCACAAAACGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * ** *
14379298 CGGCTAGAGGGGCGAGATGCACAAGTCGGGGATCGGTCGGGTTCCCTTCTGCGCGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* *
14379363 TGCTGCCGCAACCCTCGGTCCAGTCCAATCTTAGACTGGGAATGAACTCCTTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14379428 CCGATGAAATGAGCAGGCAGACAGGCGGGCGGGTACTACGCCAGCTAGAGAGACGGGATGCGCAA
196 CCGACG-AA--A-CA---AG-CAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAA
* * *
14379493 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACTTCTTCATATTTCTGCATACCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14379558 TTTTTATTGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
14379623 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCTGGATTTTTTAAAATTTTTT
383 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * * * * *
14379688 CGGATGGAGTTTTGGCCGCAAAGTTGATAGACGTGATCCTCGTA-TTTTTTTGGAATGCATAAAA
448 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* *
14379752 AAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTTC
513 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14379817 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAG
578 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
14379882 TTCTCGAGGTTTGGTGAGGGATAGGGGGCTAATATAAGTGCCAAGTACCAGCACCCATTGCACAT
643 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * * * * *
14379947 CCTGTGCTTACACCCCCCGGCCCTCCTGATCGCTGGAACCCCAATGCCGCTGGTCAGGTTCTACG
708 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
** *
14380012 ACGATGCTCCGGTGATGGTG-CCCGACGAAGAAAAATGTGGCACCAACACATGCTCGAGCCCAGC
773 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGC
* * *
14380076 ATGTGCTGTCGCAACCTTCAGA-CCGGTCCGATCTTAGATTGGGAATGAACTCCGTATG
838 ATGTGCTGTCGCAACCCTC-GATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14380134 CTTAGACAGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAACGAGTGTGCTGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
14380199 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTTCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * * * * * *
14380264 TTCTACCGTAACTCTCCGTCTGGTCCCATCTTAGACTGGGAATGAACTCCGTATGACTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
14380329 CCGACAAAATAAAAAG-ACGAGCAGGCGGGTAGTACGCCGGCTAGAGAGACGGGATGCGCAAGCC
196 CCGAC--GA-AACAAGCA-G-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCC
* *** *
14380393 GTGGATCGATAGGCTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCTAATGCCATTT
256 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
*
14380458 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCAAGACGAC
321 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
*
14380523 TCGTTTTCTATTTTTCACGATTTTGGAAACTT
386 TCGTTTTCTATTTTTCACGATTTTTGAAACTT
14380555 GGTAGACATG
Statistics
Matches: 6618, Mismatches: 843, Indels: 257
0.86 0.11 0.03
Matches are distributed among these distances:
858 163 0.02
859 3 0.00
861 1 0.00
862 1 0.00
864 2 0.00
865 44 0.01
866 458 0.07
867 3 0.00
868 3 0.00
870 2 0.00
871 1 0.00
873 5 0.00
875 55 0.01
876 5 0.00
879 4 0.00
880 5 0.00
884 55 0.01
886 2 0.00
887 3 0.00
888 1 0.00
889 2 0.00
892 5 0.00
893 161 0.02
894 1145 0.17
895 159 0.02
896 2 0.00
897 194 0.03
898 8 0.00
899 223 0.03
900 291 0.04
901 440 0.07
902 1005 0.15
903 483 0.07
904 345 0.05
905 18 0.00
906 792 0.12
907 168 0.03
908 294 0.04
909 64 0.01
911 1 0.00
912 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACAAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT
CCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
TCGCAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:14378386 original size:26 final size:26
Alignment explanation
Indices: 14378350--14378399 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
14378340 TGGTCTGATC
14378350 TTAGACTGGGAATGAACTCCGTATTT
1 TTAGACTGGGAATGAACTCCGTATTT
14378376 TTAGACTGGGAATGAACTCCGTAT
1 TTAGACTGGGAATGAACTCCGTAT
14378400 CCCTAAGTCA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.16, G:0.24, T:0.32
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATTT
Found at i:14381572 original size:26 final size:26
Alignment explanation
Indices: 14381536--14381588 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14381526 CCAGTTCGAT
14381536 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14381562 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14381588 C
1 C
14381589 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14385293 original size:863 final size:867
Alignment explanation
Indices: 14382300--14385620 Score: 4044
Period size: 863 Copynumber: 3.8 Consensus size: 867
14382290 GGTTCGAGAT
* * * * *
14382300 TTTTTAAAATTTTATCGGAAGGCGTTTTGGCCCCAAACATGGTAGACATGATCCTTTTATTTTT-
1 TTTTTGAAATTTT-TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTC
* * * *
14382364 TTCGGCAAGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGAGCCCATTTGAAA
65 TT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
14382429 AAAGTGTCCCCATTTCAGACACTTTAATGGCTAATGGCAGCAAACCTGTAGAATCTCAAATGCTC
129 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
14382494 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
194 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * * * * *
14382559 AGCACCCCTCGCACATCATGTGCGCACAGCCCCCTGGCCCCC-CGATCGCCGGAACCCCAATTCC
259 AGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCACCGAAACCCCAATGCC
* *
14382623 GTCGGTCAGGTTCTCCGGCGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAAC
324 GCCGGTCAAGTTCT-C-GC-A-G--C-GACGATGGTGCCCCGACGAAGAAAAATACGGCACCAAC
* *
14382688 ACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
382 ACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
* ** *
14382753 ACTCCGTATGCTTAGACTGGGAATGAACTTTGTATGCCTCAGTCAACCCATGAAACGAGCGTGCG
447 ACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCG
* * * * * * *
14382818 GGTGCTCAACCGGCCAGAGGGGCAGGATGTGCAAGTCGGGGATCGATCAGGTCCTCCTCTGCGTG
512 GGTGCTCAACCGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTG
** * * * *
14382883 CTATGGATCCTGCTGCCGTAACCTTCACTTCGGTCTGATCTAAGACTAGGAATGAACTCCATAAG
577 CTACCGATCCTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATAAG
* * *
14382948 CTTAAGCCGACCGACGAAAC--G-AGT---GGGCGGGCGGGCACTACGCCAGCCAGAGAGACGGG
642 CCTAAGCCAACCGACGAAACGAGCAGTGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14383007 ATGCGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGTACATCTCCATATTTCAGCATGC
707 ATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCAGCATGC
* * *
14383072 CAATGCCATTTTTATGGCTTGTAAATTCATATAATGGGCCCTTAAGCCTTCACGTGAAGTTTCAG
772 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
14383137 GGCAAGACGACTTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGAGTCGAGA
837 GGCAAGACGAC------TC-A--TTTC-C------T---A-TTTTT-C-A--C--GA
* * * *
14383194 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTTATCATTTTA-TTTT
1 -TTTTTGAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
**
14383258 CTTTGGCATGCACAAAAAAATTTTGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
64 C-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * *
14383323 AAAAGTGTCCCCATTTCAAACACATTAATGGCTACTGGCAGCAAACCAGTAAAATCTCAGATGCT
128 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
14383388 CTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA-GGGGCCAATATAGGGCGCCAAGTA
193 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG-GCCAAGTA
*
14383452 CCAGCA-CCATCACACATCATGTGCGC-CACACCCCCGGCCGTTGCCCTCGATCACGCG-AACGC
257 CCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCC----CCCTCGATCAC-CGAAAC-C
* ** *
14383514 TGCAATGCCAGCCGGTCAGAGGTT-TTTC-G-G--GATGGTGCCCCG-CGAAG-AAAATGCGGGC
316 -CCAATGCC-GCCGGTCA-A-GTTCTCGCAGCGACGATGGTGCCCCGACGAAGAAAAATAC-GGC
* * * * *
14383572 ACCAACGCATGGCCCGAGCCCAG-ATATGC-GCT-TAGACCCTCGATCCAGTCTGATCTTAGACT
376 ACCAACACAT-GCCCGAGCCCAGCATGTGCTGCTGCA-ACCCTCGGTCCGGTCTGATCTTAGACT
* * * *
14383634 GGGAATGAACTCCATTTACTTAGACTGGGAATGAATTTCGTATGCCTAAGTCAACCCATGAAACG
439 GGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACG
* ** **
14383699 AGCGTGCAGGTGCTCAGTCGACC-GAGGGGTGGGATGCGCAA-CTCGGGGATCGGTCGGGTCCCC
504 AGCGTGCGGGTGCTCAACCGACCAGAGGGGCAGGATGCGCAAGC-CGGGGATCGGTCGGGTCCCC
*** * * * *
14383762 CTCTACGTGCTACCGATCCTACTACCGTAACCCTTGGTTCAGTTTGATCTTAGGCTGGGAATGAA
568 CTCTACGTGCTACCGATCCTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGAA
* * * * * *
14383827 CTCCATATGCCTAAGCCAACCGACAAAACGAGC-G-AGC-GG-GGGCGAGCACCACACCGGCCAG
633 CTCCATAAGCCTAAGCCAACCGACGAAACGAGCAGTGGCGGGCGGGCGGGCACTACGCCGGCCAG
* * * * *
14383888 AAAGACGGGATGCACAAGCCATGGATCGTTGGGGTGGTAGGTGGGTTTTGGCACATCTTCATATT
698 AGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
** * * * *
14383953 TCTCCATACCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGCTCCCTTAAGCCTTCACATG
763 TCAGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* *
14384018 AAGTTTCATCGCAAGACGACTCATTTTCTATTTTTCACGA
828 AAGTTTCATGGCAAGACGACTCATTTCCTATTTTTCACGA
*
14384058 TTTTTG--A--------AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTT
1 TTTTTGAAATTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCT
14384113 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
66 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
14384178 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
131 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14384243 TAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAG
196 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * *
14384307 CACCCATCGCACATCATGTGCGCA-ACCCCCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGT
261 CACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCACCGAAACCCCAATGCCGC
* *
14384371 CGGTCAGGTTCTCTAGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATACGGCACCAACAC
326 CGGTCAAGTTCTC--GC-A-G---CGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACAC
* *
14384436 ATGCCCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCTGAT-TTAGACTGGGAATGAAT
384 ATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAAC
* * * * * *
14384500 TTCGTGTGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGG
449 TCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGG
* * * *
14384565 TGCTCAACCGACCAGAGGGGTAGGATGCACAAGCCGGGGATCGGTCGGGTGCCCCTCTACATGCT
514 TGCTCAACCGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCT
* * * * * * * ** *
14384630 GCCAATCCTTCTATCGCAACCCTCGA-TTTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGC
579 ACCGATCCTACTACCGTAACCCTC-ACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATAAGC
* * * * *
14384694 CTATGCCAACCGACGAAACGAGCAGGTGGACGGGCAGGCGGGCACTGCGTCGGCCAGAGAGATGG
643 CTAAGCCAACCGACGAAACGAGCA-GTGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGG
*
14384759 GATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCAGCGTG
706 GATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCAGCATG
*
14384824 CCAATGCCATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
771 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
*
14384889 TGGCAAGACGACTCATTTCCTATTTCTCACGA
836 TGGCAAGACGACTCATTTCCTATTTTTCACGA
* *
14384921 TTTTTGAAACTTTTTCGGAAGGAG-TTTGGCCCCAAACTTCGTAGATGTGATCCTTGTATTTTTC
1 TTTTTGAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTC
* * *
14384985 TTGGCACGCATAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAA
65 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
*
14385050 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCT
130 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
*
14385115 TTAAGGGGGTGTGAGTTCTCCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
195 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
*
14385180 GCACCCATCACACATCATGTGCGCACA-CCCCCCGGCCTCCC-CGATCACCGAAACTCCAATGCC
260 GCACCCATCACACATCATGTGCGCACACCCCCCCGGCC-CCCTCGATCACCGAAACCCCAATGCC
* *
14385243 GCCGGATCAAGTTCTC-C-G-G-CGATGGTGCCCTGACGAA-AAAAATGCGGCACCAACACATGC
324 GCCGG-TCAAGTTCTCGCAGCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGC
* * **
14385303 CCGAGCCCAGCAAGTGCTGCTGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCA
388 CCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCA
* * * * * **
14385368 TATGCTTAAACTAGGAATGCACTCCATATGCCTAAGTCAACCCATGAAACGAGAGTATGGGTGCT
453 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCT
* * * * * ***
14385433 TAACCGGCCAGAGGGGCAGGATGCGCAAGCTGGGGATCGGTCGAGTCCCCCTCTTCGTGCTGTTG
518 CAACCGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCG
*
14385498 ATCCTACTACCGTAACCCTCACTCCGGTCTGATCTAAGACTGGGAATGAACTCCATAAGCCTAAG
583 ATCCTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATAAGCCTAAG
* * * * * * *
14385563 CCGACCGATGAAACGAGCGGGCGGGGGTGCGGGCGGGCACTACGTCGGCTAGAGAGAC
648 CCAACCGACGAAACGAGC-AGTGGCGG-GCGGGCGGGCACTACGCCGGCCAGAGAGAC
14385621 TCGTTTTCTA
Statistics
Matches: 2103, Mismatches: 248, Indels: 181
0.83 0.10 0.07
Matches are distributed among these distances:
843 3 0.00
844 1 0.00
845 7 0.00
846 8 0.00
847 3 0.00
848 13 0.01
849 1 0.00
851 45 0.02
852 210 0.10
853 5 0.00
855 24 0.01
856 104 0.05
857 141 0.07
858 2 0.00
859 1 0.00
860 1 0.00
861 2 0.00
862 2 0.00
863 243 0.12
864 242 0.12
865 2 0.00
866 1 0.00
868 1 0.00
869 2 0.00
870 5 0.00
871 1 0.00
872 1 0.00
873 167 0.08
874 122 0.06
875 13 0.01
880 1 0.00
881 3 0.00
883 1 0.00
884 2 0.00
888 109 0.05
889 111 0.05
890 173 0.08
891 25 0.01
893 11 0.01
894 36 0.02
895 218 0.10
896 6 0.00
897 4 0.00
898 9 0.00
899 3 0.00
900 7 0.00
901 7 0.00
902 1 0.00
903 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.25, T:0.24
Consensus pattern (867 bp):
TTTTTGAAATTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCT
TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
CACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCACCGAAACCCCAATGCCGC
CGGTCAAGTTCTCGCAGCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
AGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATAT
GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAA
CCGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATC
CTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATAAGCCTAAGCCA
ACCGACGAAACGAGCAGTGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
CCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCAGCATGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCATTTCCTATTTTTCACGA
Found at i:14385375 original size:26 final size:26
Alignment explanation
Indices: 14385346--14385398 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14385336 CTGGTCCAAT
* *
14385346 CTTAGACTGGGAATGAACTCCATATG
1 CTTAAACTAGGAATGAACTCCATATG
*
14385372 CTTAAACTAGGAATGCACTCCATATG
1 CTTAAACTAGGAATGAACTCCATATG
14385398 C
1 C
14385399 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.23, G:0.19, T:0.26
Consensus pattern (26 bp):
CTTAAACTAGGAATGAACTCCATATG
Found at i:14385665 original size:864 final size:866
Alignment explanation
Indices: 14382300--14385620 Score: 3948
Period size: 864 Copynumber: 3.8 Consensus size: 866
14382290 GGTTCGAGAT
* * * * *
14382300 TTTTTAAAATTTTATCGGAAGGCGTTTTGGCCCCAAACATGGTAGACATGATCCTTTTATTTTT-
1 TTTTTGAAATTTT-TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTC
* * * *
14382364 TTCGGCAAGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGAGCCCATTTGAAA
65 TT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
14382429 AAAGTGTCCCCATTTCAGACACTTTAATGGCTAATGGCAGCAAACCTGTAGAATCTCAAATGCTC
129 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
14382494 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
194 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * * * * *
14382559 AGCACCCCTCGCACATCATGTGCGCACAGCCCCCTGGCCCCC-CGATCGCCGGAACCCCAATTCC
259 AGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCACCGAAACCCCAATGCC
* *
14382623 GTCGGTCAGGTTCTCCGGCGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAAC
324 GCCGGTCAAGTTCT-C-GC-A-G--C-GACGATGGTGCCCCGACGAAGAAAAATACGGCACCAAC
* * *
14382688 ACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
382 ACATGCCCGAGCCCAGCAAGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
* ** *
14382753 ACTCCGTATGCTTAGACTGGGAATGAACTTTGTATGCCTCAGTCAACCCATGAAACGAGCGTGCG
447 ACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCG
* * * * *
14382818 GGTGCTCAACCGGCCAGAGGGGCAGGATGTGCAAG-TCGGGGATCGATC-AGGTCCTCCTCTGCG
512 GGTGCTCAACCGACCAGAGGGGCAGGATGCGCAAGCTCGGGGATCGGTCGA-GTCCCCCTCTACG
** * * * *
14382881 TGCTATGGATCCTGCTGCCGTAACCTTCACTTCGGTCTGATCTAAGACTAGGAATGAACTCCATA
576 TGCTACCGATCCTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATA
* * * * *
14382946 AGCTTAAGCCGACCGACGAAACGA------GTGGGCGGGCGGGCACTACGCCAGCCAGAGAGACG
641 AGCCTAAGCCAACCGACGAAACGAGCGGGCGGGGGCGGGCGGGCACTACGTCGGCCAGAGAGACG
* * *
14383005 GGATGCGCAAGCCGTGGATCGAT-AGAGTGGTAGGTGGGTTTAGGTACATCTCCATATTTCAGCA
706 GGATGCGCAAGCCATGGATCGATAAG-GTGGTA-G-GGGTTTAGGCACATCTTCATATTTCAGCA
* *
14383069 TGCCAATGCCATTTTTATGGCTTGTAAATTCATATAATGGGCCCTTAAGCCTTCACGTGAAGTTT
768 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
*
14383134 CAGGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGAGTCGAGA
833 CATGGCAAGACGAC------TC-A--TTTC-C------T---A-TTTTT-C-A--C--GA
* * * *
14383194 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTTATCATTTTA-TTTT
1 -TTTTTGAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
**
14383258 CTTTGGCATGCACAAAAAAATTTTGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
64 C-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * *
14383323 AAAAGTGTCCCCATTTCAAACACATTAATGGCTACTGGCAGCAAACCAGTAAAATCTCAGATGCT
128 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
14383388 CTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA-GGGGCCAATATAGGGCGCCAAGTA
193 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG-GCCAAGTA
*
14383452 CCAGCA-CCATCACACATCATGTGCGC-CACACCCCCGGCCGTTGCCCTCGATCACGCG-AACGC
257 CCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCC----CCCTCGATCAC-CGAAAC-C
* ** *
14383514 TGCAATGCCAGCCGGTCAGAGGTT-TTTC-G-G--GATGGTGCCCCG-CGAAG-AAAATGCGGGC
316 -CCAATGCC-GCCGGTCA-A-GTTCTCGCAGCGACGATGGTGCCCCGACGAAGAAAAATAC-GGC
* * * *
14383572 ACCAACGCATGGCCCGAGCCCAG-ATA-TGC-GCT-TAGACCCTCGATCCAGTCTGATCTTAGAC
376 ACCAACACAT-GCCCGAGCCCAGCA-AGTGCTGCTGCA-ACCCTCGGTCCGGTCTGATCTTAGAC
* * * *
14383633 TGGGAATGAACTCCATTTACTTAGACTGGGAATGAATTTCGTATGCCTAAGTCAACCCATGAAAC
438 TGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAC
* ** ** *
14383698 GAGCGTGCAGGTGCTCAGTCGACC-GAGGGGTGGGATGCGCAA-CTCGGGGATCGGTCGGGTCCC
503 GAGCGTGCGGGTGCTCAACCGACCAGAGGGGCAGGATGCGCAAGCTCGGGGATCGGTCGAGTCCC
*** * * * *
14383761 CCTCTACGTGCTACCGATCCTACTACCGTAACCCTTGGTTCAGTTTGATCTTAGGCTGGGAATGA
568 CCTCTACGTGCTACCGATCCTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGA
* * * * **
14383826 ACTCCATATGCCTAAGCCAACCGACAAAACGAGCGAGCGGGGGCGAGC-ACCAC-AC--CGGCCA
633 ACTCCATAAGCCTAAGCCAACCGACGAAACGAGCGGGCGGGGGCGGGCGGGCACTACGTCGGCCA
* * * ** *
14383887 GAAAGACGGGATGCACAAGCCATGGATCGTTGGGGTGGTAGGTGGGTTTTGGCACATCTTCATAT
698 GAGAGACGGGATGCGCAAGCCATGGATCGATAAGGTGGTA-G-GGGTTTAGGCACATCTTCATAT
** * * * *
14383952 TTCTCCATACCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGCTCCCTTAAGCCTTCACAT
761 TTCAGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* *
14384017 GAAGTTTCATCGCAAGACGACTCATTTTCTATTTTTCACGA
826 GAAGTTTCATGGCAAGACGACTCATTTCCTATTTTTCACGA
*
14384058 TTTTTG--A--------AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTT
1 TTTTTGAAATTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCT
14384113 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
66 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
14384178 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
131 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14384243 TAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAG
196 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * *
14384307 CACCCATCGCACATCATGTGCGCA-ACCCCCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGT
261 CACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCACCGAAACCCCAATGCCGC
* *
14384371 CGGTCAGGTTCTCTAGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATACGGCACCAACAC
326 CGGTCAAGTTCTC--GC-A-G---CGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACAC
* * *
14384436 ATGCCCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCTGAT-TTAGACTGGGAATGAAT
384 ATGCCCGAGCCCAGCAAGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAAC
* * * * * *
14384500 TTCGTGTGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGG
449 TCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGG
* * * * *
14384565 TGCTCAACCGACCAGAGGGGTAGGATGCACAAGC-CGGGGATCGGTCGGGTGCCCCTCTACATGC
514 TGCTCAACCGACCAGAGGGGCAGGATGCGCAAGCTCGGGGATCGGTCGAGTCCCCCTCTACGTGC
* * * * * * * ** *
14384629 TGCCAATCCTTCTATCGCAACCCTCGA-TTTGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
579 TACCGATCCTACTACCGTAACCCTC-ACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATAAG
* * * * * *
14384693 CCTATGCCAACCGACGAAACGAGCAGGTGGACGGGCAGGCGGGCACTGCGTCGGCCAGAGAGATG
643 CCTAAGCCAACCGACGAAACGAGCGGGCGG--GGGCGGGCGGGCACTACGTCGGCCAGAGAGACG
* *
14384758 GGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCAGCGT
706 GGATGCGCAAGCCATGGATCGATAAGGTGGTA-G-GGGTTTAGGCACATCTTCATATTTCAGCAT
*
14384823 GCCAATGCCATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
769 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
*
14384888 ATGGCAAGACGACTCATTTCCTATTTCTCACGA
834 ATGGCAAGACGACTCATTTCCTATTTTTCACGA
* *
14384921 TTTTTGAAACTTTTTCGGAAGGAG-TTTGGCCCCAAACTTCGTAGATGTGATCCTTGTATTTTTC
1 TTTTTGAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTC
* * *
14384985 TTGGCACGCATAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAA
65 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
*
14385050 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCT
130 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
*
14385115 TTAAGGGGGTGTGAGTTCTCCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
195 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
*
14385180 GCACCCATCACACATCATGTGCGCACA-CCCCCCGGCCTCCC-CGATCACCGAAACTCCAATGCC
260 GCACCCATCACACATCATGTGCGCACACCCCCCCGGCC-CCCTCGATCACCGAAACCCCAATGCC
* *
14385243 GCCGGATCAAGTTCTC-C-G-G-CGATGGTGCCCTGACGAA-AAAAATGCGGCACCAACACATGC
324 GCCGG-TCAAGTTCTCGCAGCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGC
* **
14385303 CCGAGCCCAGCAAGTGCTGCTGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCA
388 CCGAGCCCAGCAAGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCA
* * * * * **
14385368 TATGCTTAAACTAGGAATGCACTCCATATGCCTAAGTCAACCCATGAAACGAGAGTATGGGTGCT
453 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCT
* * * ***
14385433 TAACCGGCCAGAGGGGCAGGATGCGCAAGCT-GGGGATCGGTCGAGTCCCCCTCTTCGTGCTGTT
518 CAACCGACCAGAGGGGCAGGATGCGCAAGCTCGGGGATCGGTCGAGTCCCCCTCTACGTGCTACC
*
14385497 GATCCTACTACCGTAACCCTCACTCCGGTCTGATCTAAGACTGGGAATGAACTCCATAAGCCTAA
583 GATCCTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATAAGCCTAA
* * *
14385562 GCCGACCGATGAAACGAGCGGGCGGGGGTGCGGGCGGGCACTACGTCGGCTAGAGAGAC
648 GCCAACCGACGAAACGAGCGGGC-GGGG-GCGGGCGGGCACTACGTCGGCCAGAGAGAC
14385621 TCGTTTTCTA
Statistics
Matches: 2100, Mismatches: 246, Indels: 191
0.83 0.10 0.08
Matches are distributed among these distances:
843 3 0.00
844 1 0.00
845 7 0.00
846 8 0.00
847 3 0.00
848 13 0.01
849 1 0.00
851 45 0.02
852 210 0.10
853 5 0.00
855 24 0.01
856 103 0.05
857 144 0.07
858 2 0.00
859 6 0.00
860 3 0.00
861 2 0.00
863 234 0.11
864 241 0.11
865 4 0.00
866 1 0.00
868 1 0.00
869 2 0.00
870 5 0.00
871 1 0.00
872 1 0.00
873 167 0.08
874 122 0.06
875 13 0.01
880 1 0.00
881 3 0.00
883 1 0.00
884 2 0.00
888 111 0.05
889 111 0.05
890 157 0.07
891 24 0.01
892 2 0.00
893 14 0.01
894 44 0.02
895 218 0.10
896 6 0.00
897 4 0.00
898 9 0.00
899 3 0.00
900 7 0.00
901 7 0.00
902 1 0.00
903 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.25, T:0.24
Consensus pattern (866 bp):
TTTTTGAAATTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCT
TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
CACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCACCGAAACCCCAATGCCGC
CGGTCAAGTTCTCGCAGCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCG
AGCCCAGCAAGTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATAT
GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAA
CCGACCAGAGGGGCAGGATGCGCAAGCTCGGGGATCGGTCGAGTCCCCCTCTACGTGCTACCGAT
CCTACTACCGTAACCCTCACTTCGGTCTGATCTAAGACTGGGAATGAACTCCATAAGCCTAAGCC
AACCGACGAAACGAGCGGGCGGGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
GCCATGGATCGATAAGGTGGTAGGGGTTTAGGCACATCTTCATATTTCAGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCATTTCCTATTTTTCACGA
Found at i:14386124 original size:26 final size:26
Alignment explanation
Indices: 14386086--14386138 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14386076 CTGGTCCGAT
*
14386086 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
*
14386112 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
14386138 C
1 C
14386139 CTATGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14387047 original size:26 final size:26
Alignment explanation
Indices: 14387018--14387067 Score: 75
Period size: 26 Copynumber: 1.9 Consensus size: 26
14387008 CCGGTCTGAT
14387018 CTTACACTAGG-AATGAACTCCGTACA
1 CTTACACT-GGAAATGAACTCCGTACA
*
14387044 CTTAGACTGGAAATGAACTCCGTA
1 CTTACACTGGAAATGAACTCCGTA
14387068 TGCCTAAGTT
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
25 2 0.09
26 20 0.91
ACGTcount: A:0.34, C:0.24, G:0.18, T:0.24
Consensus pattern (26 bp):
CTTACACTGGAAATGAACTCCGTACA
Found at i:14387384 original size:906 final size:895
Alignment explanation
Indices: 14386282--14388346 Score: 2990
Period size: 906 Copynumber: 2.3 Consensus size: 895
14386272 AATCCTGTTG
* * * *
14386282 CCACAACTCTCGGTCTGATCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGAC
1 CCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAAC
* * * *
14386347 GAAAC-GAGC-GGCCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGTAAGTCGTGGATCG
66 GAAACAGAGCAGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * *** *
14386410 ATAGGGTGGTAGGAGTGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCAATTTTATGGCT
131 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* *
14386475 TGTAAATTCATACAATGGTCGCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTT
196 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTT
* ** * *
14386540 TACTTTTCACGATTTTTGAAACTTTTTTG-GTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTT
261 TA-TTTTCACAATTTTCAAAAC-TTTTTGAGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTT
*
14386604 TTGGCCCCAAACTTGGTAGACGTGATCATTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
324 TTGGCCCCAAACTTGGTAGACGTGATCATTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
14386669 AAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAAGTGTCCCCATTTCAGACACTTTA
389 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTA
* *
14386734 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGTCTGAGTTCTCGAGGT
453 ATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCGAGGT
* *
14386799 TTGATGAAGGATAGGGGTCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCA
518 TTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--
* * * *
14386864 CTTCCCCCCCCGGCCGCCCCGATCGTCGGAACACC-AATGCCGCCGGTCAGGTTCTCTGGCAATG
581 -TACACCCCCCGGCCCCCCCGATCGCCGGAAC-CCTAATGCCGCCGGTCAGGTTCTCTGGCAATG
* *
14386928 CTCCGACGATGGTCCCCCGACGAAGAAAAAGGCGGCACCAGCACATGCCCGAGCC-AGCATGTGC
644 CTCCGACGATGGTCCCACGACGAAGAAAAAGGCGACACCAGCACATGCCCGAGCCTAGCATGTGC
* * *
14386992 TGTCGCAACCCTT-GATCCGGTCTGATCTTACACTAGGAATGAACTCCGTACACTTAGACT-GGA
709 TGCCGCAA-CCTTCGATCCAGTCCGATCTTACACTAGGAATGAACTCCGTACACTTAGACTGGGA
**
14387055 AATGAACTCCGTATGCCTAAGTTAACCCATC-AAATGAGCT-TACGGGCGCTCAGCCGACCAGAG
773 AA-GAACTCCGTATGCCTAAGACAACCCA-CGAAATGAG-TGTACGGGCGCTCAGCCGACCAGAG
* * * * *
14387118 GGGTGAGATGCGCAAGCCAGGGATCGGACGGG-TACCCGT-T-TGCGTGCTGTCGATCCTATTG
835 GGGCGAGATGCGCAAGCAAGGGATCCG-CGGGAT-CCC-TCTCTGCGTGCTGTCGATCCTACTA
** * *
14387179 CTGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTGCGTATGCCTAAGCCAACCAAC
1 CCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAAC
* * *
14387244 GAAACATGCAGGCGGGAGGGGCGGGCGGGCACTACGCCGACCAGAGAGACAGGATGCACAAGCCG
66 GAAACA-G-A-GC---A-GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
14387309 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
124 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
14387374 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATT
189 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
14387439 CATTTTCTATTTTTCACAATTTTCAAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTTGGA
254 CGTTTTTTA-TTTTCACAATTTTCAAAACTTTTTG-AGTTCGAGATTTTTTAAAATTTTTTTGGA
* * * *
14387504 GGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTACAAAACAAT
317 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCATTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
14387569 TCAGCTAAAAAGTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAT
382 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
14387634 ACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCT
447 ACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCT
*
14387699 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
512 CGAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* *
14387764 TGCGTACACCCCCCGGCCCCCCCGATCGCCGGAACCCTAATGCCGTCGGTCAGGTTCTCTGGCGA
577 TGCGTACACCCCCCGGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCTGGCAA
* * * * *
14387829 TGCTTCGACGATGGTGCGACGACGAAGAAAAATGCGACACCAGCACATGCTCGAGCCTAGCATGT
642 TGCTCCGACGATGGTCCCACGACGAAGAAAAAGGCGACACCAGCACATGCCCGAGCCTAGCATGT
* * * **
14387894 GCTGCCGCAACCTTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
707 GCTGCCGCAACCTTCGATCCAGTCCGATCTTACACTAGGAATGAACTCCGTACACTTAGACTGGG
* * *
14387959 AAAGAACTCTGTATGCCTAAGACAACCCACGAATTGAGTGTACGGGCGCTCAGCCGGCCAGAGGG
772 AAAGAACTCCGTATGCCTAAGACAACCCACGAAATGAGTGTACGGGCGCTCAGCCGACCAGAGGG
* * *
14388024 GCGAGATTCGCAAGCAAGGGATCCGCTGGATCCCTCTCTGCGTGCTGTCGATCCTGCTA
837 GCGAGATGCGCAAGCAAGGGATCCGCGGGATCCCTCTCTGCGTGCTGTCGATCCTACTA
* * * *
14388083 CCACAACCCTCGGTTTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCTAT
1 CCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAAC
*
14388148 GAAA-GGAGCA-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
66 GAAACAGAGCAGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* **
14388211 ATAGGG-GGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATTACT
131 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* * *
14388275 TGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAGATGACTCGTTTTT
196 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTT
14388340 TATTTTC
261 TATTTTC
14388347 CAGCATGTGC
Statistics
Matches: 1046, Mismatches: 102, Indels: 44
0.88 0.09 0.04
Matches are distributed among these distances:
893 5 0.00
894 116 0.11
895 56 0.05
897 63 0.06
899 1 0.00
900 3 0.00
901 3 0.00
902 4 0.00
903 115 0.11
904 211 0.20
905 11 0.01
906 333 0.32
907 125 0.12
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
CCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAAC
GAAACAGAGCAGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTT
TATTTTCACAATTTTCAAAACTTTTTGAGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTT
GGCCCCAAACTTGGTAGACGTGATCATTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
GCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCGAGGTTTG
ATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACAC
CCCCCGGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCTGGCAATGCTCCGAC
GATGGTCCCACGACGAAGAAAAAGGCGACACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCA
ACCTTCGATCCAGTCCGATCTTACACTAGGAATGAACTCCGTACACTTAGACTGGGAAAGAACTC
CGTATGCCTAAGACAACCCACGAAATGAGTGTACGGGCGCTCAGCCGACCAGAGGGGCGAGATGC
GCAAGCAAGGGATCCGCGGGATCCCTCTCTGCGTGCTGTCGATCCTACTA
Found at i:14387951 original size:26 final size:26
Alignment explanation
Indices: 14387922--14387974 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14387912 CCAGTCCGAT
*
14387922 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
*
14387948 CTTAGACTGGGAAAGAACTCTGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
14387974 C
1 C
14387975 CTAAGACAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCGTATG
Found at i:14388763 original size:469 final size:461
Alignment explanation
Indices: 14387887--14388814 Score: 1227
Period size: 461 Copynumber: 2.0 Consensus size: 461
14387877 GCTCGAGCCT
* * * * *
14387887 AGCATGTGCTGCCGCAACCTTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
1 AGCATGTGCTACCACAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATGCCTA
* ** ** * *
14387952 GACTGGGAAAGAACTCTGTATGCCTAAGACAACCCACGAATTGAGTGTACGGGCGCTCAGCCGGC
66 GACAGGGAAAGAACTCCATATGCCTAAGACAACCCACGAAAGGAGCGTACGGGCGCTCAGCCAGC
* * * * *
14388017 CAGAGGGGCGAGATTCGCAAGCAAGGGATCCGCTGGATCCCTCTCTGCGTGCTGTCGATCCTGCT
131 CAGAGGGGCGAGATGCGCAAGCAAGGGATCCGCTGGATCCCTCGCTACATGCTGCCGATCCTGCT
* ** *
14388082 ACCACAACCCTCGGTTTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCTA
196 ACCACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGA
* * * *
14388147 TGAAAGGAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
261 CGAAAGGAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAAACGAGATGCGCAAGCCGTGGATCAA
* *
14388212 TAGGGGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATTACTTG
326 TAGGGGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCCAATGCCATTTTTATGACTTG
* * * * * *
14388277 TAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAGATGACTCGTTTTTTA
391 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCATTTTCTA
14388342 TTTTCC
456 TTTTCC
* **
14388348 AGCATGTGCTATCACAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATAAACTTTGTATGCCTA
1 AGCATGTGCTACCACAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATGCCTA
* * * *
14388413 GACAGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAAGGAGCGTGCGGGCGTTCAGCCAGC
66 GACAGGGAAAGAACTCCATATGCCTAAGACAACCCACGAAAGGAGCGTACGGGCGCTCAGCCAGC
* * * *
14388478 CAGAGGGGCG-GTATGCGTAAG-ATGGGGAT-CGATTGGGTCCC-CGCTACATGCTGCCGATCCT
131 CAGAGGGGCGAG-ATGCGCAAGCA-AGGGATCCG-CTGGATCCCTCGCTACATGCTGCCGATCCT
* * * * *
14388539 GTTGCCATAACCCTCAGTCCGATTCGATCTTAGACTGGGAGTGAAC-TCTGTATGCCTAAGCCAA
193 GCTACCACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTTC-GTATGCCTAAGCCAA
*
14388603 CCGACGAAACGAGCGAGCGAGCAGGCGGGCGGGCACTAGGCCGGCCAGAGAAACGAGATGCGCAA
257 CCGACG--A--A---AG-GAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAAACGAGATGCGCAA
**
14388668 GCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTATGTGCCAATGCCA
314 GCCGTGGATCAATAGGG-GGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCCAATGCCA
*
14388733 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGAC
378 TTTTTATGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGAC
14388798 GACTCATTTTCTATTTT
443 GACTCATTTTCTATTTT
14388815 TCATGATTTT
Statistics
Matches: 401, Mismatches: 53, Indels: 18
0.85 0.11 0.04
Matches are distributed among these distances:
459 2 0.00
460 77 0.19
461 140 0.35
462 1 0.00
464 1 0.00
467 2 0.00
468 60 0.15
469 118 0.29
ACGTcount: A:0.24, C:0.24, G:0.27, T:0.25
Consensus pattern (461 bp):
AGCATGTGCTACCACAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATGCCTA
GACAGGGAAAGAACTCCATATGCCTAAGACAACCCACGAAAGGAGCGTACGGGCGCTCAGCCAGC
CAGAGGGGCGAGATGCGCAAGCAAGGGATCCGCTGGATCCCTCGCTACATGCTGCCGATCCTGCT
ACCACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGA
CGAAAGGAGCAGGCGGGCGGGCACTACGCCGGCCAGAGAAACGAGATGCGCAAGCCGTGGATCAA
TAGGGGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCCAATGCCATTTTTATGACTTG
TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCATTTTCTA
TTTTCC
Found at i:14389303 original size:26 final size:26
Alignment explanation
Indices: 14389274--14389326 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14389264 TTGATCCGAT
14389274 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14389300 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14389326 C
1 C
14389327 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14390200 original size:26 final size:26
Alignment explanation
Indices: 14390171--14390223 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14390161 CTGGTCCGAT
14390171 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14390197 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14390223 C
1 C
14390224 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14391970 original size:26 final size:26
Alignment explanation
Indices: 14391941--14391993 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14391931 CTGATCCGAT
* *
14391941 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14391967 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14391993 C
1 C
14391994 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14392869 original size:26 final size:26
Alignment explanation
Indices: 14392833--14392884 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
14392823 CCGGTCCGAT
14392833 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
14392859 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
14392885 TCTAAGTCAA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.15, G:0.27, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:14393766 original size:26 final size:26
Alignment explanation
Indices: 14393737--14393788 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
14393727 CTGGTCCGAT
*
14393737 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14393763 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
14393789 TCTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14394664 original size:26 final size:26
Alignment explanation
Indices: 14394635--14394687 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14394625 CTGGTCCGAT
*
14394635 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14394661 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14394687 C
1 C
14394688 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14395447 original size:872 final size:875
Alignment explanation
Indices: 14388532--14396438 Score: 9294
Period size: 902 Copynumber: 8.9 Consensus size: 875
14388522 TACATGCTGC
* ** * * *
14388532 CGATCCTGTTGCCATAACCCTCAGTCCGAT-TCGATCTTAGACTGGGAGTGAACTCTGTATGCCT
1 CGATCCTGCTGCCGCAACCCTCAGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * *
14388596 AAGCCAACCGACGAAACGAGCGAGCGAGCAGGCGGGCGGGCACTAGGCCGGCCAGAGAAACGAGA
65 AAGCCAACCGATGAAACGAGC-AG-GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
* * ***
14388661 TGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTATGTGCC
128 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
*
14388726 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATG
193 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * * *
14388791 GCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTTGGGATTTTTCAAA
258 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* *
14388856 ATTTTTTTGGAAGGAGTTTTCGCCCCAAA-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
323 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
14388920 CATAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
388 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
14388985 CTATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
453 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
14389050 GTGTGAGTTCTAGAGGTTTGATG-GGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCAT
518 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
14389114 CGCACATCATGTGCGCACAGCCCCCTCGGCCCCCCCGATTGTTGGAACCCCAATGTCGCCGGTCA
583 CGCACATCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCA
* *
14389179 GG-T-T------A---TCCGACGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCAAATGCCC
646 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* * *
14389233 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTTTGATCCGATCTTAGACTGGGAATGAACTCCGTA
711 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * *
14389298 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAAAGAGCGTGCGAGAGCTCA
776 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * *
14389363 GTTGGCCAGAGGGGCGGGGTGCGCAAGCCGGGGAT
841 GCTGGCCAGAGGGGCGGGATGTGCAAGCCGAGGAT
** *
14389398 CGACCGGGTCCCCCTCTGTGTGCTACCGATCCTACTACCGCAACCCTTGGTTCGGTCTGATCTTA
1 CGA-----T----C-C----TGCT---G---------CCGCAACCCTCAGTCCGGTCTGATCTTA
* * * * *
14389463 GACTGGGAATGAACTCCGTATGCCTAAGCCAACTGATAAAACGAGC--GGGTGGACGGGTGGGCA
40 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCAGGGGCGGGCGGGCGGGCA
* * *
14389526 CTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTAGTAGGTGGGTTTAGGC
105 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *
14389591 ACATCTTCTTATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATTGTCCCTT
170 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* *
14389656 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAAACTT
235 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* ** * * *
14389721 TTTGCGGTTCGATATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCTCCAAACTTGGTAAACGTG
300 TTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
14389786 ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTGAGCTAAAAACTCGAAGTGTACAAGATTTT
365 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
14389851 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGACAGAAAACCTGTAA
430 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
*
14389916 AATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATCT
495 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * * *
14389980 AAGGGTCAAGTACCAGCACCCATTGCACATCATGTGCACACACCCCCCGG-CCCCCCGATC-ACT
560 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTC-
** * * * *
14390043 GGAACCCCAATGCCATCGGTCAAGTTCTCCGGCGATGCTCC-AGCGATGGTGCCCCGGCAAAGAA
624 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGACGAAGAA
* * *
14390107 AAATTCGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCTGGTCCGATC
688 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATC
14390172 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
753 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * *
14390237 TGAAACGAGCGTGC-AGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGATCGG
818 CGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGTGCAAGC-------CGA----
14390301 GTGCCCCTCTATGTGCT
872 G-G-------A-----T
* * * **
14390318 GCAGATCTTGCTGCCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCC
1 -C-GATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * ** * *
14390383 TAAGCCAATCGATGAAATGAGC--GGGCGGGCGGGTAGGCACTACGTCGGCCAGACAGACGGGAT
64 TAAGCCAACCGATGAAACGAGCAGGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * * * * *
14390446 GCCCAAGTCGTGGATCGATAAGATGGTAGGTAGGTTTAGGCACATCTTCATATTTCTACATGCCA
129 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
*
14390511 ATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
194 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * **
14390576 CAAGATGACTTGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTAGCGGTTCAAGATTTTTTAAA
259 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA-CGGTTCGGGATTTTTTAAA
* * *
14390640 ATTTTTTCGGAAGGAGTTTTGCCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTATTGGCATG
323 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
14390705 CACAAAAAACATT-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGT-
388 CACAAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
14390768 CCCATTTCAGACACTTTAATGGCTACTGGCACCAAACCTGTAAAATCTCAAATGCTCTTTAA-GG
452 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
14390832 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGTGCCAATATAAGGGCTAAGTACCAGCCCCCA
517 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * *
14390897 TCACACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGAAACCCAAATGCTGCCGGAT-A
582 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGG-TCA
* ** * *
14390960 GGTTCTCCGACGATGCTCCGACGATGGTGCCTCGGTGAAGAAAAATGCAGCACCAGAACATGCCC
646 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* * *
14391025 AAGCCCAGCATGTGCTACTGCAA-CCT---TC--G---G----T---CT--G---G---TCCG-A
711 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* *
14391065 T-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTTA
776 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * ** * *
14391129 GCCGACCAGAGGGGTAGGATGCGCAAGCTGAGGATCGGT
841 GCTGGCCAGAGGGGCGGGATGTGCAAGCCGAGGA----T
* *
14391168 CGGGTCCCCCTCTACGTCCTGCCGATGCTGCTGCCGTAGCCCTCGGTCCGGTCTGATCTTAGACT
1 C--G---------A--TCCTG-C--TGC--C-G-C--AACCCTCAGTCCGGTCTGATCTTAGACT
* * * * *
14391233 CGAAATGAACTCCGTATGCCTAGGCCAACCGACGAAACGAGC--GGGCGGGCTGGCGGGCACTAC
44 GGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCAGGGGCGGGCGGGCGGGCACTAC
* *
14391296 GCCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACAT
109 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
14391361 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
174 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * **
14391426 CCTCACGTGAAGTTTCATGGCAAGACGACTCGTTATCTATTTTTCATGATTTTCAAAAC-TTTTA
239 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA
* * * *
14391490 TGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTAGCCCCAAACTTGGTAGACGTGATCC
304 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * * * *
14391555 TTGTATTTTTGTTGACATGCAAAAAAAAATTCAGCTAAAAAATCGAAGAGTACAAGATGTTGTGA
369 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * *
14391620 CCATTTTGAAAAAAGTATCCCTATTTCAAATACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
434 CCA-TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * *
14391685 CGCAAACGCTCTTTAAGGGGTGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
498 CTCAAATGCTCTTTAAGGGG-GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * * *
14391750 CGGCCAAGTACCAGTACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCAATCGTCGG
562 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGG
* * *
14391815 AACACCAATGCCGCCGGTCAGGTTCTCCGACGATGCTTCGACGATGGTGCCCCGACAAAGAAAAA
626 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAA
* * * * * *
14391880 TGCAGG-ATCAGCACATGTCCGAGCCCAACATGTGCTGCCGTAACCCTTGGTCTGATCCGATCTT
691 TGC-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTT
* * *
14391944 AGACTGGGAATGAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCAACG
755 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * *
14392009 AAACGAGCATGCAGGCGCTCAG-TAGGCCAGAGGGGTGTGGGATGTGCAAGCCGAGGATCGGTCG
820 AAACGAGCGTGCGGGCGCTCAGCT-GGCCAGA-GGG-GCGGGATGTGCAAGCCGAGGA-------
14392073 GGTTCCCCTCT
875 ----------T
** ** *
14392084 GCGTGATATCTATCCTGCTGCCGCAACCCTTGGTCCAATCCGATCTTAGACTGGGAATGAACTCC
1 -C--G------ATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * * ** * * *
14392149 GTATGCCTAAGCCAACCGATGAAATGAGCGGGCAGGCGCGCAAGCGGGCACTGCGTCAGCCAGAG
57 GTATGCCTAAGCCAACCGATGAAACGAGCAGG--GGCGGGCGGGCGGGCACTACGCCGGCCAGAG
* *
14392214 AGATGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
120 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * * *
14392279 TACGTGCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAA
185 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
** *
14392344 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGA-GGTTCGAGA
250 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT-ACGGTTCGGGA
** * * *
14392408 TTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCTCAAACATGGTAGACATGATCCTTGTATTTTT
314 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * *
14392473 GTTCGCATGCACAAAAAAATTCAGCTAAAAACTCGATGTGTACAAGATTTTGTGGCCATTTGAAA
379 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
14392538 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACAGGTAGCAAACCTGTAAAATCTCAAATGCTC
444 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* **
14392603 TTTAAGGGGGTGTGAGTTCTCGAGGTTTAATGAGGGATAGGGGGATAATATAAGGGCCAAGTACC
509 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
14392668 AGCACCCATCGCACATCATTTGCGCACACCTCCCCGGCCCCCCCGGTCGTCGAAACCCCAGTGCC
574 AGCACCCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
* * * *
14392733 GTCGGTCAGGTTCGCCGGCGATGCT-C--CGA----------A-GAAGAAAAATACGGCACCAGC
638 GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
* * * *
14392784 AGATGCCCGAGCCCAACATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGA
703 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGA
* * * **
14392849 ACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGTCTAAGTCAACCCACGAAACGAGCGTATG
768 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * *
14392914 GGCGTTCAGCCGGTCAGAAGGGCGGGATGCATAAGTCGGGGATCGATCGGGTCCCCCTCTGCATG
833 GGCGCTCAGCTGGCCAGAGGGGCGGGATG--T--G-C----A---A----G-----C-C-G-A-G
* *
14392979 CTAC
873 -GAT
* *
14392983 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * * *
14393048 AACCAACCGACGAAATGAACGTGCGGGCGGGCGGCCGGGCACTACGCCAGCCAGAGAGACGGGAT
66 AGCCAACCGATGAAACGAGC-AG-GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
***
14393113 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGCGCCA
129 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* *
14393178 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCTCGTAAGCCTTCACGTGAAGTTTCATGG
194 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * * *
14393243 CAAGACGACTCGTTTTCTATTTTTTCATTATTTTAGAAACATTTTGCGGTTAGGGATTTTTTAAA
259 CAAGACGACTCGTTTTCTA-TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* *
14393308 ATTTTTTCGGGAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
323 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
14393373 CACAAAAAAATTCAGCTTAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
388 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
14393438 CCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGG
453 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * *
14393503 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGACCAATATACGGGCTAAGTACCAGCACCCAT
518 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
14393568 TGCACATCATGTACGCACACCCCCTGGCCCCCCCAATCGCCGGAACCCCAATGCCGCCGGTCAGG
583 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
* ** *
14393633 TTCTCCGACGATGCTCCGACGATGGTACCCCGGTGAAGAAAAATGCGGCAGCAGCACATGCCCGA
648 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* ** *
14393698 GCCCAGCATGTGCTACCATAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
713 GCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14393763 CTTAGATTGGGAATGAACTCCATATGTCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAAC
778 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
14393828 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCTCCCTCTTCGTGCTAT
843 TGGCCAGAGGGGCGGGATGTGCAAGCC---GA--------------------G-G--AT
* * *
14393887 AGATCCTGCTTCCGCAACACTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
14393952 AGCCAACCGATGAAAC-A-AACGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGC
66 AGCCAACCGATGAAACGAGCAGGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * *
14394015 GTAAGCCATGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
131 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
* *
14394080 GCCATTTTTATGGCTTGCAAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTGATGGC
196 GCCATTTTTATGGCTTG-TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * * * * *
14394145 AAGACGACTCGTTTTCTACTTTTCACGATTTTTGAAACTTTTTGCTGTTCGAGAATTTTCAAAAT
260 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAT
* *
14394210 TTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCA
325 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
14394275 CAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCC
390 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * * *
14394340 ATTTTAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGAGGCT
455 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * * *
14394405 GTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGTCAAATACTAGCACCCATCA
520 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* *
14394470 CACATCATGTGCGCACACCCACCCCTGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAG
585 CACATCATGTGCGCACA-CC-CCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
* * ** * * *
14394534 GTTCTCCGGCAACACTCCGTC-ATAGTG-CCCGACGAAGAAAAAT-CAGCACCAGCACATG-CCG
647 GTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
** *
14394595 AGCCCAGCATGTGCAACCGCAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTAT
712 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
14394660 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
777 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* **
14394725 CTGGCCAGTGGGAAGGGATGTGCAAGCCGAGGAT
842 CTGGCCAGAGGGGCGGGATGTGCAAGCCGAGGAT
* ** * *
14394759 CGATCCTGCTGCCGCAACCCTCTGTCCGGTCCAATCTTAGACTAGGAATGAACTTCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
14394824 AGCCAACCGACGAAACGAGCAGGGGCGGGCGGGCAGGCACTACGCCGGGCAGAGA-ACGGGATGT
66 AGCCAACCGATGAAACGAGCAGGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * * * *
14394888 GTAAGCTGTGGATCAATAGGGTGGTAGGTGGGTGTAGGCACATCTTCATATTTCTGTATGCCAAT
131 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
*
14394953 GCCATTTTTATGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
196 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * *
14395018 GGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGATTTGGGATTTTTTAAAATT
261 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* * *
14395083 TTTTCGGAAAGAGTTTTGGCCCCAAACTTGGTAGACTTGATCCTTGTATTTTTGTTGGCATGCAT
326 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * * *
14395148 AAAAACATTCACCTAAAAACTTGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
391 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
14395213 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
456 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
*
14395278 TGAGTTCTCGAGGATTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
521 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14395343 ACATCATGTGCGCACACCCCCCGACCCACCCGATCGTCGGAACCCCAATGCCGCCGATCAGCTTC
586 ACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * * **
14395408 TCTGACGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGCCGCACCAGCACATGCATGAGCC
651 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * *
14395473 CAGCATGTGCTGCCACAACCCTC-GTCCGATCTGATCTTAGACTGGGTATGAACTCCGTATGCTT
716 CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * * **
14395537 AGACTGGGAATGACCTCTGTAGGCCTAGGTCAACCCACGAAACGAGCGTGCACGCGCTCAG-TCG
781 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCT-G
* *
14395601 GCCAGAGGGGCAGGAT-CGCAAGCTGGGGATTCGACTGGGTCCCCTTCTGCATGCT
845 GCCAGAGGGGCGGGATGTGCAAGC--------CGA----G---------G-A---T
* * *
14395656 ACTGATCCTGCTACCGCAACCCTCAATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCC
1 -C-GATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* *
14395721 TAAGCCAACCGATGAAACGAGCAGGCAGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGG
64 TAAGCCAACCGATGAAACGAGCAGG--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14395786 ATGCACAAGCGGTGGATCGATAGGGTGGTAGGTCGGTTTAGGAACATCTTCATATTTCTGCATGC
127 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* *
14395851 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTAACGTGAAGTTTCAT
192 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * * *
14395916 GGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCAGTTTGGGATTTTTTAA
257 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * * * *
14395981 AATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCGTGTATTTTTTTTGGCAT
322 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * * * *
14396046 GCATAAAAAAATTCAACTAAAAACTTGAAGTGTACAAGATTTTGTGGCCATTTGAGAAAAGTGTC
387 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
14396111 CCCATTTCAGACTCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGA
452 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
14396176 GGTGTGAGTTCTTGAAGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
517 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * *
14396241 TTGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAG
582 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
* * * * *
14396306 GTTCT-C--CG--G-T-----GATGGTACGCTGGCGAAGAAAAATGCGGCACCAGCACATGCCTG
647 GTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* *
14396360 AGCCCAGCATGTGCTGTCGTAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
712 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
*
14396425 GCTTAGACTTGGAA
777 GCTTAGACTGGGAA
14396439 AGGACAATTT
Statistics
Matches: 6094, Mismatches: 681, Indels: 506
0.84 0.09 0.07
Matches are distributed among these distances:
849 1 0.00
850 3 0.00
851 1 0.00
858 1 0.00
859 2 0.00
861 4 0.00
862 1 0.00
863 2 0.00
864 3 0.00
866 4 0.00
868 4 0.00
869 169 0.03
870 349 0.06
871 68 0.01
872 455 0.07
873 280 0.05
874 68 0.01
875 101 0.02
876 5 0.00
877 1 0.00
879 4 0.00
880 6 0.00
882 2 0.00
883 3 0.00
884 3 0.00
886 30 0.00
887 4 0.00
888 268 0.04
889 211 0.03
890 306 0.05
891 364 0.06
892 254 0.04
893 7 0.00
894 6 0.00
895 254 0.04
896 427 0.07
897 162 0.03
898 148 0.02
899 100 0.02
900 426 0.07
901 162 0.03
902 545 0.09
903 86 0.01
904 233 0.04
905 6 0.00
906 129 0.02
907 268 0.04
908 126 0.02
909 4 0.00
911 2 0.00
912 6 0.00
913 2 0.00
914 5 0.00
915 2 0.00
916 3 0.00
917 4 0.00
920 1 0.00
921 1 0.00
922 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (875 bp):
CGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
AGCCAACCGATGAAACGAGCAGGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
ACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGG
CCAGAGGGGCGGGATGTGCAAGCCGAGGAT
Found at i:14397759 original size:26 final size:26
Alignment explanation
Indices: 14397721--14397772 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
14397711 CGGTCTGATG
*
14397721 TTAGACTGGGAATGAAATTCGTATGC
1 TTAGACTGGGAATGAAATCCGTATGC
* *
14397747 TTAGACTGTGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAAATCCGTATGC
14397773 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.15, G:0.25, T:0.31
Consensus pattern (26 bp):
TTAGACTGGGAATGAAATCCGTATGC
Found at i:14399198 original size:903 final size:904
Alignment explanation
Indices: 14397417--14399634 Score: 3033
Period size: 903 Copynumber: 2.4 Consensus size: 904
14397407 GGAGTTTTGG
* *
14397417 CCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTATAAAATCTCAAATGCTCTTTAAGGG
1 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * * * *
14397482 GCTGTGAGTTCTCGAGGTTTGATAAGAGATAGGGGCCCAATATAAGGGCCAAGTACCTGCACCCA
66 GGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGG-CCAATATAAGGGCCAAGTACCAGCACCCA
* ** * *
14397547 TCGCACATCATGTGCGCACACCCCCACCCCCAGCCCCCGATCGTCGGAACCCCAATGCCGCTTGT
130 TCGCACATCATGTGCGCACA-CCCCATCGGCA-CCCCCGATCGCCGGAACCCCAATGCCGC-GGT
* * * * *
14397612 TAGGTTCTTCGGTGATGCTCTGGCGATGGTGCCCCGGTGAAAAAAAATACGACACCAGCACATGC
192 CAGGTTCTCCGGCGATGCTCTGGCGATGGTGCCCCGATGAAGAAAAATACGACACCAGCACATGC
* * * * * * *
14397677 ACGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATGTTAGACTGGGAATGAAATTCG
257 TCGAGCCCAGCATGTGCTATCGCAACCCTCGGTCTGGTCTGATCTTAGACTGAGAATGAACTCCG
* * * *
14397742 TATGCTTAGACTGTGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCCTGCGAGTGTT
322 TATGCTTAGACTG-GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCT
* * * * * * * **
14397807 CAACCGGCCAGAGGGGCGGGATATGTAAGCCGAGGATTCGATCGGGTCCCCCTCTATGTGCTGTT
386 CAGCCAGCCAGAGGGGCGGGATACGCAAGCCGAGGATTCGATCAGATCCCCCTCTACGTGCTGCC
** ** ** *
14397872 GATTTTGTTGCCGTAACCCTAGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAA
451 GATCCTACTGCCCCAACCCTAGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* *
14397937 GCCAACCGACGAAACAAGCGGGCAGGCGGGCGGGCAGGCAGGCACTATACCGGACAGAGAGACGG
516 CCCAACCGACGAAACAAGCGGGCAGGCGGGCGGGCA-G-AGGCACTACACCGGACAGAGAGACGG
* * * *
14398002 GATGTGCAAGCCATGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCGTATTTCTACATG
579 GATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTACATG
*
14398067 CCAATGCCATTTTTATGGCTCGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTCAAGTTTCA
644 CCAATGCCATTTTTATGGCTCGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCA
14398132 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTTCGGTTCGAGATATTTTA
709 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTTCGGTTCGAGATATTTTA
* *
14398197 AAATTTTTTTGAAAAGAGTTTCAGCCCCAAACCTGGTAGACATGATCCTTGTATTTTTATTGGCA
774 AAATTTTTTAGAAAAGAGTTTCAGCCCCAAACCTGGTAGACATGATCATTGTATTTTTATTGGCA
* * * *
14398262 TGCATAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGT
839 TGCACAAAAAAATTCAGATAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
14398326 C
904 C
14398327 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
1 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
14398392 GGTGCGAGTTGTCAAGGTTTGATGAGGGATAGGCGGCCAATATAAGGGCCAAGTACCAGCACCCA
66 GGTGTGAGTTGTCGAGGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * *
14398457 TCGCATATCATGTGCGCCCACCCCTTCGGCACCCCCGATCGCCAGAGCCCCGATGCCGTCGGTCA
130 TCGCACATCATGTGCGCACACCCCATCGGCACCCCCGATCGCCGGAACCCCAATGCCG-CGGTCA
* * * * ** *
14398522 GGTTCTCCGGCGATGCTCTGACGACGGTGCCTCGACGAAGAAAAATTTGGCACCAGCACATGCTC
194 GGTTCTCCGGCGATGCTCTGGCGATGGTGCCCCGATGAAGAAAAATACGACACCAGCACATGCTC
* * * *
14398587 GAGCCCAGCATGTGCTATTGCAAGCCTCTGTCTGGTCTGATCATAGACTGAGAATGAACTCCGTA
259 GAGCCCAGCATGTGCTATCGCAACCCTCGGTCTGGTCTGATCTTAGACTGAGAATGAACTCCGTA
* *
14398652 TGCTTAGACTGGAAATGATCTCCGTAAGCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCTCA
324 TGCTTAGACTGG-AATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCTCA
* * * * *
14398717 GCCAGCCAGAGGGGCGGGATACGCAAGTCGGGGA-TCGATCAGATCCCCTTTTACGTTCTGCCGA
388 GCCAGCCAGAGGGGCGGGATACGCAAGCCGAGGATTCGATCAGATCCCCCTCTACGTGCTGCCGA
* *
14398781 TCCTACTGCCCCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAACC
453 TCCTACTGCCCCAACCCTAGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAACC
* * *
14398846 CAACCGACGAAACGAGCGGGC-GGACGGGCGGGC-G-GGTACTACACCGGCCAGAGAGACGGGAT
518 CAACCGACGAAACAAGCGGGCAGG-CGGGCGGGCAGAGGCACTACACCGGACAGAGAGACGGGAT
** * * *
14398908 GCGCAAGCTGTGGATCGATAGGGTGGTAGGTTGATTTAGGTACATCTTCATATTTCTGCATGCCA
582 GCGCAAGCCATGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTACATGCCA
* * * *
14398973 ATGCCATTTTTATGGCTTGTAAATTCATATAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
647 ATGCCATTTTTATGGCTCGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGG
* * * *
14399038 CAAGACGACTCGTTTTTTATTTTTTACGATTTTTGAAA-CTTTTTACGGTTCGAGATTTTTTTAA
712 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTT-CGGTTCGAGATATTTTAAA
* ** * * *
14399102 ATTTTTTCAG-AAGGAGTTTTGGCCCCAAACTTGGTTGACATGATCATTGTATTTTTGTTGGCAT
776 ATTTTTT-AGAAAAGAGTTTCAGCCCCAAACCTGGTAGACATGATCATTGTATTTTTATTGGCAT
* *
14399166 GTACAAAAACATTCAGATAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
840 GCACAAAAAAATTCAGATAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
14399231 CTCATTTCAGACACTGTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGG
1 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
14399296 GGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAAGTACCAGCCCCCA
66 GGTGTGAGTTGTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * *
14399361 TCGCACATCATGT--GCACACCCCCTCGGC-CCCCCGATCACTGGAACCCCAATGCCGCCGGTCA
130 TCGCACATCATGTGCGCACACCCCATCGGCACCCCCGATCGCCGGAACCCCAATGCCG-CGGTCA
* * *
14399423 GGTTCTCCAGCGATGCTCCGGC-ATGGTGCCCCGATGAAGAAAAATACGTCACCAGCACATGCTC
194 GGTTCTCCGGCGATGCTCTGGCGATGGTGCCCCGATGAAGAAAAATACGACACCAGCACATGCTC
* *
14399487 GAGCCCAGCATGTGCTACCGCAACCCTCGGT-TCGGTCTGATCTTAGACT-AGGAATGAACTCTG
259 GAGCCCAGCATGTGCTATCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGA-GAATGAACTCCG
* * * *
14399550 TATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTGAACCCACGAAACCAGCGTGCGGGCGCT
322 TATGCTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCT
14399615 CAGCCTA-CCAGAGGGGCGGG
386 CAGCC-AGCCAGAGGGGCGGG
14399635 CAGGCGGGCA
Statistics
Matches: 1150, Mismatches: 146, Indels: 34
0.86 0.11 0.03
Matches are distributed among these distances:
899 2 0.00
900 163 0.14
901 50 0.04
902 19 0.02
903 296 0.26
904 143 0.12
905 3 0.00
906 2 0.00
907 107 0.09
908 219 0.19
909 8 0.01
910 136 0.12
911 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (904 bp):
CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
GGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCATCGGCACCCCCGATCGCCGGAACCCCAATGCCGCGGTCAGG
TTCTCCGGCGATGCTCTGGCGATGGTGCCCCGATGAAGAAAAATACGACACCAGCACATGCTCGA
GCCCAGCATGTGCTATCGCAACCCTCGGTCTGGTCTGATCTTAGACTGAGAATGAACTCCGTATG
CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCTCAGCC
AGCCAGAGGGGCGGGATACGCAAGCCGAGGATTCGATCAGATCCCCCTCTACGTGCTGCCGATCC
TACTGCCCCAACCCTAGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAACCCAA
CCGACGAAACAAGCGGGCAGGCGGGCGGGCAGAGGCACTACACCGGACAGAGAGACGGGATGCGC
AAGCCATGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTACATGCCAATGC
CATTTTTATGGCTCGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAG
ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTTCGGTTCGAGATATTTTAAAATTTT
TTAGAAAAGAGTTTCAGCCCCAAACCTGGTAGACATGATCATTGTATTTTTATTGGCATGCACAA
AAAAATTCAGATAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
Found at i:14399557 original size:26 final size:26
Alignment explanation
Indices: 14399528--14399580 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
14399518 TCGGTCTGAT
14399528 CTTAGACTAGGAATGAAC-TCTGTATG
1 CTTAGACTAGGAATGAACTTC-GTATG
*
14399554 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
14399580 C
1 C
14399581 CTAAGTGAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTTCGTATG
Found at i:14402638 original size:26 final size:26
Alignment explanation
Indices: 14402594--14402646 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
14402584 AAGGTCTAAT
* * *
14402594 CTTAGCCTGGGAATGAACTCCGGATG
1 CTTAGACTGGAAATAAACTCCGGATG
*
14402620 CTTAGACTGGAAATAAACTCCGTATG
1 CTTAGACTGGAAATAAACTCCGGATG
14402646 C
1 C
14402647 CCAAGTCAGC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGAAATAAACTCCGGATG
Found at i:14403526 original size:25 final size:26
Alignment explanation
Indices: 14403483--14403534 Score: 97
Period size: 25 Copynumber: 2.0 Consensus size: 26
14403473 CTGGTCCAAT
14403483 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14403509 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14403534 C
1 C
14403535 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 18 0.69
26 8 0.31
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14404412 original size:26 final size:26
Alignment explanation
Indices: 14404383--14404435 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14404373 CTGGTCCAAT
14404383 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14404409 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14404435 C
1 C
14404436 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14405310 original size:26 final size:26
Alignment explanation
Indices: 14405272--14405324 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14405262 CTGGTCCGAT
* *
14405272 CTTAGATTGGGAATGAACTCCCTATG
1 CTTAGACTAGGAATGAACTCCCTATG
*
14405298 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCCTATG
14405324 C
1 C
14405325 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCCTATG
Found at i:14405788 original size:888 final size:888
Alignment explanation
Indices: 14401722--14417743 Score: 19097
Period size: 903 Copynumber: 18.0 Consensus size: 888
14401712 CCAGTCCGAT
* * * * * * *
14401722 CTTAAACTAGGAATGAACTACGTATGCCTATGTCAACCCACGAAACGAGCGGGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
14401787 CGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGC-CCTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCT-GATC
* * ** * * * *
14401851 CTGCTGCTGCAACCCTCAGTCCGGTCCAATCTAAGACTAGGAATCAACTTCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
14401916 ACCGA-TAAA--A-CGAGTGGGCGGGCGGGCACTATGTCGGCCAAAGAGGCGGGATGCGCAAGTC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
**
14401977 GTGGATCGATAGGGTGGTAGGTGGGTTTTCA-GCACATCTTCATATTTCTGTGTGCCAATGCCAT
260 GTGGATCGATAGGGTGGTAGGTGGG-TTT-AGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* * *
14402041 TTTTATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGGCA
323 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * ** *
14402106 ACTCGTTTTCTATTTTTTCACGATTTTCAAAACTTTTTGCGGTTCAAGATTTTGTAAAATTTTTT
388 ACTCGTTTTCTA-TTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * *
14402171 CGGAAGGATTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGACATGCACAAAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
14402236 AAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
14402301 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
14402366 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * ** *
14402431 CATGTGAGCACACCTCCCCGGCACCCCCGATCGCCGGAACAACAATGCC-CTTGGTCAGGTTCTC
712 CATGTGCGCACACC-CCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGC-CGGTCAGG-----
* * **
14402495 TGGCAATCCTCCGACGATGGAGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTTGAGCCCA
770 T-----T-CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* ** ** * *
14402560 GCATGTGCTGCCACAACCCTCGGTAAGGTCTAATCTTAGCCTGGGAATGAACTCCGGATG
829 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * **
14402620 CTTAGACTGGAAATAAACTCCGTATGCCCAAGTCAGCCCACGAAACGAGCGCACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** * * * **
14402685 CTGCCAGAGGGGTGGGATACGTAAGTCATGGATCGGTCGGGTCCCCTTCTGCATGCT-ATCGAAG
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCT-GATC
* ** * * * * *
14402749 CTGCTACTACAACCCTCAGTCCAGTCTAATCTTAGACTGGGAATGAACTTCGTATGCCTAATCCA
130 CTGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
14402814 A-CAAAGAAATGA----GCGGGCGGGCGGGCACTACGTCGGCCAGAAAGTCAGGATGTGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* ** *
14402874 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTCTGTGTGCCAATGCCAATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
14402939 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAATTTCGTGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * * *
14403004 TCGTTTCCTATTTTTCATGATTTTCAAAAC-TTTTACGGTTTGAG-TTTTTTTAAATTTTTT-GG
390 TCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * * * *
14403066 AAGGATTTTTGGCCCCAAACTTGATAGTCGTGAGCCTTGTATTTTTGTTGGTATGCACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
14403131 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATTCAAA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14403196 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTG
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
14403261 TCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
14403326 GTGCGCATACCCCCTCCGGCCCCCCCGATCATCG-AA-CCCAATGCCGCC-GTCAGGTTCTCCGG
715 GTGCGCACA-CCCC-CCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCC--
* * *
14403388 TGATGTTCCGACGATGGTGCCTCGACGAAGAAAAATACGGCACCAGCACATGCCCGA-ACCAGCA
776 ----G----G-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * *
14403452 TGTGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
832 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14403509 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14403573 CGGCCA-AAGGGCGGGATGCACAAGGCAGGGATCGGTCGGGTCCCCCTCTGCATGCTG-TCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCT-GATC
* * * * * *
14403636 CTGCTCCCACAA-CCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14403700 ACCGACGAAACGAGCAGGCGGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAAC--G-A-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * *
14403765 AGCCGTGGATCAATA-GGTGGTAGGTGGGTTTAGGTACATCTTTATATTTCTACATGCCAATGCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
***
14403829 ATTTTTATAAATTGTAAATTCATACAATGGTCCCTTAA-CTCTTCACGTGAAGTTTCATGGCAAG
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC-CTTCACGTGAAGTTTCATGGCAAG
* * *
14403893 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCAGGATTTTTTTAAATTTT
385 ACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* ** *
14403958 TTCGGAAAGAGTTTTGGCCCCAAACTTCTTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAA
450 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
14404023 AAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
515 AAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
14404088 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAATGGGGG-G
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTG
* * *
14404152 TGAGTTCTCAAGGTTTGATGAGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCATCGA
643 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * * * *
14404217 AAATAATGTGTGCACACCCCCTGGCCCCCCCGACCATCGAAACCCCAATGCCGTCGGTCAGGTTC
708 ACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTC
*
14404282 TCTGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
773 TC---C---G----G-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * *
14404347 CAGCATATGCTGCTGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATG
827 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14404409 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAGATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * *
14404474 CGACCAAAGGGGCGGGATGCACAAGTTGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * *
14404539 TGCTGCCGCAACCCT-TGTTCTGGTCTGATCTT--A----G-ATGAACTCCATACGCCTAAGCCA
131 TGCTGCCGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14404596 ACCGACGAAAAGAGCGGGCGGGCGGGGGGGAGTGCGGGCACTACGTCGACCAGAGAGACGGGATG
195 ACCGACGAAACGAGCGGGCGGGC------G-G-GCGGGCACTACGCCGGCCAGAGAGACGGGATG
* *** *
14404661 CGCAAGCCGTGGATCGATAGGGTGGTAGTTAAATTTAGGCTCATCTTCATATTTCTGCATGCCAA
252 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
* * *
14404726 TGCCATTTTTATGGCTTGTGAAA-TCATACAATGTTCCCTTAAGCCTTCACATGAAGTTTCGTGG
317 TGCCATTTTTATGGCTTGT-AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
*** *
14404790 CAAGACGACTCGTTTTCTATTTTTTTGGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
381 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* * * * * *
14404855 TTTTTTCGGAAGGATTTTTGGACCCAATCTTGGTAGACATGATCCTTGTATTTTTTTTGTCATGC
446 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * ** *
14404920 ACAAAAAAATTCAACTAAAAAATTAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCT
511 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
14404985 CACTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCATATGCTCTTTAAGGGGG
576 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * ** * * * *
14405050 TGTGACTTCTTGAGGTTTGATGAGCAATAGGGGGCCAATATAGGGGCCAAGTACCACCTCCCATT
641 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * *
14405115 GCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCTATTGCCACCGGTCAGGT
706 GCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGT
* *
14405180 TCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAACATGTG
771 TCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * *
14405245 CTGTCACAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCCTATG
836 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14405298 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14405363 TGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCAGGTCCCCCTCTACGTGCTGCTGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
* **
14405428 TGCTGCCACAACCCTCAGTTCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** * *
14405493 CCGATGAAACGAGCGGACGGGCGGGCAGGCACTATACCGACAAGAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
14405558 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
14405623 TATGGCTTGTAAAATCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
14405688 CGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTCAGA
391 CGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * * * **
14405753 ATGAGTTTTGGCCCCAAACTTGATAGACGTGATCCTTGTATTTTTATTGGGACACACAAAAAAAT
456 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
14405818 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCGTTTCAGAC
521 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
14405883 ACTTTAATTGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAGGGGGGTGTGAGTTCT
586 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
14405948 CGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCACATCATC
651 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * * *****
14406013 TGTGCACACCCGTCTGGGCCCCCCGATCG-CTGGAACCCCAATATTATCGGTCAGGTTCTCCGGG
716 TGCGCACACCC-CCCGGCCCCCCCGATCGTC-GAAACCCCAATGCCGCCGGTCAGGTTCTCC---
* ** * * * *
14406077 GATGCTCCGATGATGGTGCTCCGGTGGAGAAAAATGCGGTACCAACACATGCCCGAACCCAGCAT
776 G--G---C---GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * ** * * *
14406142 GTGCTGCCACAACCCTCAGTCCAATTCGATCTTAGACTGGGAATTAACTCTGTATG
833 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
14406198 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT--------T----
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * ** *
14406251 ----CAGAGGGGTGGGATGCGCAAGCAGGGGATCGACCGGGTCCCCCTCTGTGTGCTACCAATAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
** * * *
14406312 TGCTGCCGCAACCCTTGGTCCGGTCTGATCTTTGACTGGGAATGAACTCCGTATGCCAAAGCCAA
131 TGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14406377 CTGACGAAATGA--------GCGGGCGGGTACTACGCCGGCCAGAGACAAGGGATGCGTAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * * *
14406434 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCACATATCTACGTCCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
14406499 TATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * **
14406564 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCAAA
391 CGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* *
14406629 ATGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
456 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
14406694 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
521 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
14406759 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATACTCTTTAAGGGGGTGTGAGTTCT
586 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
14406824 CGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCAAAGTACCAACACCCAT--CACA-CA--
651 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* ** * * *
14406883 T-----C-CCCCTCAACCCCCCCGATTGTCGAAACCCTAATGCCGCCGATCAGGTTCTCCGGCGA
716 TGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
* * *
14406942 ---TGCTCCG--G-CG----ATG-GTGC-TCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
781 TGGTGCCCCGACGAAGAAAAATGCG-GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* *
14406995 CCCTCGGTCCGGTTCGATCTTAGACTGGGAATCAACTCCGTATG
845 CCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14407039 CTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCAAGAAATGAGCATACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14407104 CGGCTAGAGGGGCGGGATGCGCAAGTCAGCGATC-GACTGGGTCCCCCTCT--G-G--G-TG--C
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCTGATC
* *
14407160 C-G-T--CGCAACCCTC-GATCTGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * ** * *
14407220 AACCGATGAAATTAGCGGGCGGGCGAGCGGGCGGGCACTACATCGGCCAAAAAGACGGGATGCGC
194 AACCGACG-AA--A-CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * ***
14407285 AAGCTGTGGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGC
255 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
*
14407350 CATTGTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
320 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * * * * *
14407415 GCAACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCAGGATTTTGTAAAATGTT
385 ACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* *
14407480 TTCGGAAGGATTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
450 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
14407545 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
14407610 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
14407675 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAAGTACCAGCACCCATCGCAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * *
14407740 ATCACGTGCGCACACCCCTCCTGACCTCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
710 ATCATGTGCGCACACCCC-CC-GGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGG---
* * *
14407805 TCTGGCGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGTGGTACCAGCACATGCCCGAGCC
770 --T-----T-CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * * * *
14407870 TAGCATGTGCTGTCGCAACCCTTGGTCTGATTCGATCTTAGACTGGGAATGTACTCCGTATG
827 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14407932 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCTGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14407997 CGGCCAGAGGAGTGGGATGCGCAAGCCGGGGATTGGCCGGATCCCCCTCTACGTGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * *
14408062 TGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14408127 TCGACGAAACGAACGGGCGGACGGGCGGGCGGGCACTACACCGGCCAGAGAGACAGGATGCGCAA
196 CCGACGAAACG-A---GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * *
14408192 GTCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATGTCTGCGTGCCAATGCCT
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14408257 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAATTTCGTGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
14408322 GACTCGTTTCCTATTTTTCATGATTTTCAAAAC-TTTTACGGTTCGAGTTTTTTTAAAAATTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTT-AAAATTTTT
* * *
14408386 T-GGAAGGAGTTTTGGCCCCAAACTTGATAGTCGTGAGCCTTGTATTTTTGTTGGCATGCACAAA
451 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
14408450 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
14408515 TAGACACTTTAATGGCCACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14408580 GTTCTCGAGGTTTGATGAGGGATTGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
14408645 TCATGTGCGCAC-CCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
711 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCT-C
** *
14408709 GACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAG
775 --C---G----G-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * *
14408774 GATGTGCTGCCCCAACCCTCAGTCCGGTCTGATCTTAGACCGGGAATGAACTCCGTATG
830 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14408833 CTTTGAGTGGGAATGAACT-CTTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** *
14408897 CGGCCA-AAGGGCGGGATACGCAAGCCGGGGATTCGACCGGGTCCCCCTCTGCGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTCTGCGTGCTGCTGATC
* * * * *
14408961 TTGCTGTCGCAACCCT-TGTTCCAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCAGTT-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
14409025 AACTGATGAAATAAGCGGGCAGGCGGGCGGATGGGCGGGCAGGCACTATGCTGGCCAAAGAGATG
194 AACCGACG--A-AA-C--G-A-GCGGGC----GGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* *
14409090 GGATGCGCAAGCCGTGGATCGA-AGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTTCTGCGT
247 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* *
14409154 GCTAATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
312 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * ** *
14409219 ATGGCAAGACGGCTCGTTTTCTATTTTTCACGATTTTTGAAACTATTTT-CGGTTTAGGATATTT
377 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACT-TTTTACGGTTCGGGATTTTT
* * * *
14409283 TAAAATTTTTTCGGAAAGTGTTTTGGCCACAAACTTGG-ACGACATGATCCTTGTATTTTTGTTG
441 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA-GACGTGATCCTTGTATTTTTGTTG
* * *
14409347 GCTATGCCCAAAAAAAATTCAGCTAAAAACTCAAAAG-GGACAAGATTTTGTGACCATTTGAAAA
505 GC-ATGCAC-AAAAAAATTCAGCTAAAAACTC-GAAGTGTACAAGATTTTGTGACCATTTGAAAA
* *
14409411 AATTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCT
567 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
*
14409476 TTGAGGGGGTGTGAGTTCTCGGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
632 TTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
14409541 AGCACCCATCGCTCATCATGT--GCACACCCCCCAGG--CCCCCGATCGTCGGAACCCTCAATGC
696 AGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGAAACCC-CAATGC
* * * *
14409602 CACCGATCAGGTTCTCTGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGTGGCACCAG
759 CGCCGGTCAGG-----T-----T-CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
*
14409667 CAAATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC-T----T----A-G
813 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATG
14409722 -A-T---T-TG
878 AACTCCGTATG
* *
14409727 ----GA-----AA-GAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
*
14409782 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCAGGTCCCCCTCTGC--G-TGCTG--CC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * * ** ** *
14409842 -GAT-CAG-AA--CTCGGGGCAATCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14409902 CCGAAGAAACGAGCAGGCGGACGAGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGC--G-GG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
14409967 GCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTGCGTGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
14410032 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
14410097 GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
** * * *
14410162 CAAAAGGAGTTTTGGCCCAAAACTTGGTGGACATGATCCTTGTATTTTTGTTGGCATGCACAAAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
14410227 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14410292 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
14410357 TTGTCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
*
14410422 CATGTGCGCACACCCCCTCGG-CCCCCCGATCATCGAAACCCCAATGCCGCCGGTCAGGTTCTCC
712 CATGTGCGCACACCCCC-CGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCC
* *
14410486 GGTGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAACCCAG
776 ------G----G-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
*
14410551 CATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
830 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14410610 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAA-CCACGAAACGAGCGTGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * **
14410674 CGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGAATCCCCTTTTGCGTGCTGCCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG-GTCCCCCTCTGCGTGCTGCTGATC
* *
14410739 CTGCTGCCCCAACCCTC-GGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
14410803 AACCGATGAAACGAGCGGGCGAACAGGCGAGCGGCCACTACACCGGCCAGAGAGACAGGATGCGC
194 AACCGACGAAACGAGCGGGCG----GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* *
14410868 AAGCCGTGGATCGATAGGGTGGTAGGTGGATTTAGGTACATCTTCATATTTCTGCATGCCAATGC
255 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* * * *
14410933 CATTTTTATGGCTTGTAAATTCATATAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCTTGGTAAG
320 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* *
14410998 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTT
385 ACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
** * * * * *
14411063 TTCAAAAGGAGTTTTGGCCCCAAACCTGGTAGACATGATCATTTTATTTTTGTTGGCATGCATAA
450 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
14411128 AAACATTCAGCTAAAAAATTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
14411193 CCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
14411258 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
14411323 ATCATGTGCG--C-CCCCCC-G-CCCCCCGATC-ACCAGAACCCCAATGCCGCCAGTCAGGTTCT
710 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGA-AACCCCAATGCCGCCGGTCAGGTTCT
** *
14411382 CCAGCGATGCTCCAGCATGGTGCCCCGGTGAAGAAAAATGCGTCACCAGCACATGCCCGAGCCCA
774 -C--CG--G---C-G-ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * *
14411447 GCATGTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCCTACG
829 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14411507 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCA-TAAGACGAGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA-ACGAGCGTGCGGGCGCTCAG
** * * * *
14411571 CCTACCAGTGGGGCAGGATGCGCAAGCCAGGGATTCGGTTGGGT--CCC-C--C-T-CTGC-G--
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTCTGCGTGCTGCTGAT
*
14411626 --TGCTGCCGCAACCCTCAG-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
129 CCTGCTGCCGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
14411688 CAACCGACGAAACAAACGGGCGGGCGGGCGGGCGGGCACTACGCTGACCAAAGAGACGGGATGCG
193 CAACCGACG----AAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * * * * *
14411753 TAAGCCGTGGATCGATAGGTTGGTAGCTGGGTTTAGGCACATCTTCATATTTGTACGTGCCAATG
254 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* * ** *
14411818 CCA-TTTTATGGCTTGTAAATTCATAGAATGGTCTCTTAAGCCTTCACAAGAAGTTTAATGGCAA
319 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * *
14411882 GACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTT
384 GACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * *
14411947 CTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACA
449 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
14412012 AAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCCT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
14412077 TTCAGACACTTTAATGGCTACTGGCAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
14412142 GAGTTGTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * ** *
14412207 CATCATGTGCGCACACCCCCCGG-CCCCCCAATCGCCGGAACCCCAATGCCATCGGTTAGGTTCT
709 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCT
**
14412271 CCGACGATGCTCCAGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
774 -C--C---G-----GCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * *
14412336 AGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTTGACTGGGAATGAACTCCGCATG
828 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14412397 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCTGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14412462 TGGCCAGAGGGGCAGGATGCGCAAG-CGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
* ** ** *
14412526 TGCTGCCACAACCCTTGGTTCGGTCCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** * * *
14412591 CCGACGAAATGAGCGGGCGGGCAGGCAGGCACTACATCGGCCAGAGGGACGGGATGCGGAAGCTG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
14412656 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
14412721 TATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
14412786 TGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGGA
391 CGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* *
14412851 AGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTA-TTTTATTAGCATGCCACAAAAAAA
456 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG-CACAAAAAAA
* * *
14412914 TTTAGCTAAAAA-TCAAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14412978 CACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * * *
14413043 TTGAGGTTTGGTGAGAGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCTCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * *
14413108 GTGCGCACA-CCCCCGGCCCCTCCGATCGCCG-GACCCTAATGCCGTCGATCCGGTTCTCCGACG
715 GTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCG--G
*
14413171 ATCCTCCAACGATGGTGCCCCAACGAAG-AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
778 ---------CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * *
14413235 TGCTGCTGCAACACTCGGTCTGGTGCGATCTTAGATTGGGAATGAACTACGTATG
834 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
14413290 CTTAGACTGGGAATGAACTCCGTATGCTTATGTGAACCCAAGAAACGAGCATGCTGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14413355 CGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATTGATCGGGTCCCCTTCTGTGTGCT-ATCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCT-GATC
* * * * ** * *
14413419 CTACTACCACAACCCTC-GGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGGATTCCTAAGCC
130 CTGCTGCCGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
14413483 AACTGACGAAACGAACGGGCGGGTGGGAGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGC
194 AACCGACGAAACG-A---GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * * * *
14413548 AAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGTACATCTTTATGTTTTTGCATGCCAATGC
255 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* * * * * *
14413613 CATTTTTATGGCTTCTAAATTCATATC-GTGGTCCCTTAAGCTTTCATGTGAAGATTCATGGAAA
320 CATTTTTATGGCTTGTAAATTCATA-CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
*
14413677 GATGACTCGTTTTCTATTTTTCACGATTTTC-AAA------A-----C-----TTTTT---A---
384 GACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
*
14413719 ---C-----GA-TTTT----CAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
449 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * *
14413771 AAAAAATTTAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTAGCCCCCA
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT-GTCCCCA
* *
14413836 -TTCAGGACACTTTAATGGCTAGTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGT
578 TTTCA-GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * * *
14413900 ATGAGTTCTTGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCT
642 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * * *
14413965 CACATCATGTGCGCACACCCCCCCAGCCCCCTCGATCGCCGGAACCGCAATGCCGTCAGTCAGGT
707 CACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGT
* **
14414030 TCTCCGGCGATGCTCCGACGATGGTACCCC-AGTGAAGAAAAATGTTGCACCAGCACATGCCCGA
771 TCTCCGGCGA---T--G--G-T-G--CCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * * * *
14414094 GCCCAGCATGTGCTGTCGTAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATTAACTCCGCATG
824 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14414159 CTTAGACTGGGAATGTACTCTGTATACCTAAGTCAACCAACGAAACGAGCGTGCGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * **
14414224 CGGCCAGAGGGGTGGGATGTGTAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
**
14414289 TGCT-CCTGCAACCCTCAGTTCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCC-GCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * **
14414353 ACCGAC-AGAACGAAAGGATGGGCGGGCGAGCAGGCACTACACCAACCAGAGAGACGGGATGCGC
195 ACCGACGA-AACG--A-G-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
*
14414417 AAGCCGTGGATTGATAGGGTGGTCA-GTGGGTTTAGGCACATCTTCATATTTTCTGCATGCCAAT
255 AAGCCGTGGATCGATAGGGTGGT-AGGTGGGTTTAGGCACATCTTCATA-TTTCTGCATGCCAAT
*
14414481 GCCATTTTTATGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
318 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * ** * *
14414546 AGACGACTCGTTTTCTATTTTTCATGATTTTGGAAACTTTTTTTGGTTTGAGATTTTTTAAAATT
383 AGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* * * *
14414611 TTTTTGGAAGGAGTTTTGG-CCCAAAATCTGGTAGACGTGATCCTTGTATTTCTATTGGCATGCA
448 TTTTCGGAAGGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
14414675 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
512 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
14414740 ATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGT
577 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
14414804 GTGAGTTCTCAAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
642 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
**
14414869 CACATCATGTGCGCACACCCCACCCGG-CCCCCCGATCGTCGAAACCCCAATGCTACCGGTCAGG
707 CACATCATGTGCGCACA-CCC-CCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGG
* *
14414933 TTCTTTGGCGATGCTCCGGCGATCGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGA
770 -----T-----T-CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * * *
14414998 GCCCAGCATGTGCTGTCGCAATCCTTGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATG
824 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14415063 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAATCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
14415128 CGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGG-CGGGGTCCCCCTCTACGTGCTGCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCTGATC
* * * *
14415192 CTGCTACCGCAACCCTCAGTCCGGTCTGATCTTATACTAGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
14415257 ACCGACGACACAGCGGGCGGGTGGGAGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCACAA
195 ACCGACGA-A-A-CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
14415322 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTTTGCGTGCCAAAGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14415387 TTTTTATGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAGTGAAGTTTCATGGCAAGA
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-GTGAAGTTTCATGGCAAGA
* * *
14415452 CGACCCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGGATTTTTTAAAATTTTT
386 CGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
14415517 TCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTGGTTGGCATGCACAAA
451 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
14415582 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCTTTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
14415647 CAGACACTTTAATGGCTACTGGCAGCAAAGCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14415712 GTTCTCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCATCTTCAC
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCAC
* * * *
14415776 AT--TGTGCGCACACCACCTCC-G-CCCTCCGATCGTCGGAACTCCAATTGCCGTCGGTCAGTTC
710 ATCATGTGCGCACACC-CC-CCGGCCCCCCCGATCGTCGAAACCCCAA-TGCCGCCGGTCA----
* * * *
14415837 TCCGGTGATCCTACGGCGATGATGCCCC-A-AAAGAAAAAT---GCACCAGCACATGCCCAAGCC
768 ---GGT--T-CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * **
14415897 CAGCATGTGATGTCTGAAACCCTC-GTCCGGTCTGATCTTAGACTTGGGAATGAACGTAAAAGTA
827 CAGCATGTGCTG-CCGCAACCCTCGGTCCGGTCCGATCTTAGAC-TGGGAATGAAC-T--CCGTA
14415961 TG
887 TG
* *
14415963 C----ACTAGGGAATGAA---CGT-TG-C-AAGTCAACCCACGAAATGAGCGTGCGGGCACTCAG
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
14416018 CCGACCAGAGGGACGGGATGCGCAAGCCGAGGATCGGTCGGGTACCCCTCTTCGTGCTG-TCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCT-GAT
* * * ** * *
14416082 CCTTCTGCCACAACCCTC-GATCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATTCCTAGGC
129 CCTGCTGCCGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
14416146 CAATCGATGAAACGAACGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAG
193 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * *
14416211 CCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACGTCTTCATATTTCTGCACGCCAATGCCAT
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
*
14416276 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTAATGGCAAGAC
323 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGAC
* * * *
14416341 GACTCGTTTTCTATATTTCATGATTTTC-AGAACTTTTTACGGTTCAGGATTTTTAAAAATTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTCGA-AACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* *
14416405 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGGTGGCATGCACAAA
451 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * *
14416470 AAAATTCAGCTAAAAACGCGAAGTGTACACGATTTTGTGACCATTTTAAAAATGTGT-CCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * * *
14416534 CAAACACTTTAATGGCTACTGGCAGTAAACTTGTAAAATCTCAAGTGCTCTTTAAAGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14416599 GATCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
14416664 TCATGTGCGCACACCCCCTGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
711 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * *
14416728 GGTGATGCTGCAAACGATGGTGCCCCGACAAAGAAAAATGCGGCACTAGCACATGCCCAAGCCTA
776 ------G--G----CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * **
14416793 GCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGATTGGGAATGAACTTTGTATG
829 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14416853 CCTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAGGAGTGTGCGGGCGCTCCGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * *
14416918 CGGCCAGAGGGGTAGGATGTGCAAGCCGCGGATCGGCCGGGT---CC-C--C---CT-CT-A-CG
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
* *
14416971 TGCTGCCGCAACCCTC-GATCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
131 TGCTGCCGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** *
14417035 ACCGATGAAACGAGCGGGCGGGCGGGTGGGTGGGCACCACGTTGGCTAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAGCGGGCGGGC----GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
14417100 AGCCGTGGATCAATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
14417165 ATTTTTATGGGTTGTAAATTCATACAATGGACCCTTAAGCCTTCACATGAAGTTTCATGGCAAGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * *
14417230 CGACTGGTTTTCTTTTTATTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAATGT
386 CGACTCGTTTTCTATTT-TTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTT-AAAATTT
* * *
14417295 TTT-GGAAGCTA-TTTTGGCCCCAATCTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCAC
449 TTTCGGAAG-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
*
14417358 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGACCCCA
513 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
14417423 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
578 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
14417488 TGAGTTTTCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
643 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14417553 ACATCATGTGCGCACACCCCCCAGACCCCCCGATCGCCGAAA-CCCAATGCCGCCGATCAGGTTC
708 ACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCA-G---
* * *
14417617 TCCGTTGATGCTCCGGCGGTGGTGCCCCGACGAAG-AAAACGTGGCACCAGCACATGCCCGAGCC
769 ---G-T--T-CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * *
14417681 CAGCATGTGCTGCCGCAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATG
827 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
14417743 C
1 C
14417744 CTAAGTCAAC
Statistics
Matches: 13146, Mismatches: 1471, Indels: 1022
0.84 0.09 0.07
Matches are distributed among these distances:
841 119 0.01
842 4 0.00
844 2 0.00
845 54 0.00
846 3 0.00
847 2 0.00
848 2 0.00
849 10 0.00
852 2 0.00
854 1 0.00
855 2 0.00
856 5 0.00
857 459 0.03
858 32 0.00
860 6 0.00
861 2 0.00
862 3 0.00
863 80 0.01
864 56 0.00
865 208 0.02
866 135 0.01
867 189 0.01
868 270 0.02
869 327 0.02
870 108 0.01
871 39 0.00
872 6 0.00
873 5 0.00
875 79 0.01
876 422 0.03
877 6 0.00
878 4 0.00
879 7 0.00
880 5 0.00
881 6 0.00
882 14 0.00
883 4 0.00
884 119 0.01
885 443 0.03
886 227 0.02
887 298 0.02
888 873 0.07
889 404 0.03
890 374 0.03
891 473 0.04
892 520 0.04
893 446 0.03
894 339 0.03
895 300 0.02
896 426 0.03
897 432 0.03
898 636 0.05
899 189 0.01
900 688 0.05
901 473 0.04
902 160 0.01
903 885 0.07
904 734 0.06
905 326 0.02
906 101 0.01
907 152 0.01
908 103 0.01
909 36 0.00
910 225 0.02
911 68 0.01
912 1 0.00
914 1 0.00
915 11 0.00
918 1 0.00
920 2 0.00
921 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (888 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCC
TGCTGCCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
TGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:14406208 original size:26 final size:26
Alignment explanation
Indices: 14406172--14406224 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14406162 CCAATTCGAT
* *
14406172 CTTAGACTGGGAATTAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14406198 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14406224 C
1 C
14406225 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14407042 original size:26 final size:26
Alignment explanation
Indices: 14407013--14407065 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14407003 CCGGTTCGAT
*
14407013 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTAGGAATCAACTCCGTATG
* *
14407039 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATCAACTCCGTATG
14407065 C
1 C
14407066 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATCAACTCCGTATG
Found at i:14407942 original size:26 final size:26
Alignment explanation
Indices: 14407906--14407958 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14407896 CTGATTCGAT
*
14407906 CTTAGACTGGGAATGTACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14407932 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14407958 C
1 C
14407959 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14409063 original size:904 final size:902
Alignment explanation
Indices: 14406960--14433158 Score: 15181
Period size: 903 Copynumber: 28.9 Consensus size: 902
14406950 CGATGGTGCT
14406960 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT-TCGATCTTAGACTGGG
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGG
* * * * *
14407024 AATCAACTCCGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCAAGAAATGAGC
65 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * * *
14407089 ATACGGGCGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGTCAGCGATC-GACTGGGTCCCCCTC
130 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTC
* * *
14407153 TG-G-G-T---G--CC-G-T--CGCAACCCTCGATCTGGTCTGATCTTAGACTGAGAATGAACTC
194 TGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTC
* ** * *
14407206 CGTATGCCTAAGCCAACCGATGAAATTA-GCG-GGCGGGCGAGCGGGCGGGCACTACATCGGCCA
259 CGTATGCCTAAGCCAACCGACGAAAGAACGGGCGGCGGGCGA--GGGCGGGCACTACACCGGCCA
* * * *
14407269 AAAAGACGGGATGCGCAAGCTGTGGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATAT
322 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*** *
14407334 TTCTATGTGCCAATGCCATTGTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
387 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * * *
14407399 GAAGTTTCATGGCAAGGCAACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTC-A
452 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA
* * * *
14407463 GGATTTTGTAAAATGTTTTCGGAAGGATTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATT
517 -GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
*
14407528 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTG
581 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
14407593 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
646 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
14407658 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAAGT
711 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
14407723 ACCAGCACCCATCGCACATCACGTGCGCACACCCCTCCTGACCTCCCCGATCGTCGGAACCCCAA
776 ACCAGCACCCATCGCACATCATGTGCGCACA-CCC-CCTGGCC-CCCCGATCGTCGGAACCCCAA
* * * * *
14407788 TGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTCGACGAAGAAAAATGTGGTAC
838 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * *
14407853 CAGCACATGCCCGAGCCTAGCATGTGCTGTCGCAACCCTTGGTCTGAT-TCGATCTTAGACTGGG
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGG
* *
14407917 AATGTACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGC
65 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * * * * *
14407982 GTGCTGGTGCTTAGTCGGCCAGAGGAGTGGGATGCGCAAGCCGGGGATTGGCCGGATCCCCCTCT
130 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT
* ** *
14408047 ACGTGCTGTTGATCCTGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
195 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
*
14408112 GTATGCCTAAGCCAATCGACGAAACGAACGGGCGGACGGGC--GGGCGGGCACTACACCGGCCAG
260 GTATGCCTAAGCCAACCGACGAAA-GAACGGGCGG-CGGGCGAGGGCGGGCACTACACCGGCCAG
* * * *
14408175 AGAGACAGGATGCGCAAGTCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATG
323 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
14408240 TCTGCGTGCCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
388 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * *
14408305 AAATTTCGTGGCAAGACGACTCGTTTCCTATTTTTCATGATTTTCAAAAC-TTTTACGGTTCGAG
453 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAG
* * * *
14408369 TTTTTTTAAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGATAGTCGTGAGCCTTGTATTT
518 ATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
14408433 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
582 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
14408498 AAAAAGTGTCCCCATTTTAGACACTTTAATGGCCACTGGTAGCAAACCTGTAAAATCTCAAATGC
647 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
14408563 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATTGGGGGCCAACATAAGGGCCAAGTA
712 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
14408628 CCAGCACCCATCGCACATCATGTGCGCAC-CCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGC
777 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTGG-CCCCCCGATCGTCGGAACCCCAATGC
* ** *
14408692 CGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGACAC
841 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * *
14408754 CAGCACATGCCCGAGCCCAGGATGTGCTGCCCCAACCCTCAGTCCGGTCTGATCTTAGACCGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * * *
14408819 ATGAACTCCGTATGCTTTGAGTGGGAATGAACT-CTTATGCCTAAGTCAACCCATGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * **
14408883 TGCGGGCGTTCAACCGGCCA-AAGGGCGGGATACGCAAGCCGGGGATTCGACCGGGTCCCCCTCT
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTCT
* * * * * *
14408947 GCGTGCTGCCGATCTTGCTGTCGCAACCCTTGTTCCAGTCTAATCTTAGACTGGGAATGAACTCC
195 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * *
14409012 GTATGCCTAAGCCAACTGATGAAATAAGCGGGCAGGCGGGCGGATGGGCGGGCAGGC-ACTATGC
260 GTATGCCTAAGCCAACCGACGAAAGAA-CGGGC-GGCGGGC-GA-GGGCGGGCA--CTAC-A--C
* * * *
14409076 TGGCCAAAGAGATGGGATGCGCAAGCCGTGGATCGA-AGGGTGGTAGGTGGGTTGAGGCACATCT
316 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* * *
14409140 TCATATTTCTGCGTGCTAATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCTTAAGCCT
381 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* **
14409205 TCACGTGAAGTTTCATGGCAAGACGGCTCGTTTTCTATTTTTCACGATTTTTGAAACTATTTT-C
446 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT-TTTTAC
* * * * * *
14409269 GGTT-TAGGATATTTTAAAATTTTTTCGGAAAGTGTTTTGGCCACAAACTTGG-ACGACATGATC
510 GGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA-GACGTGATC
* * *
14409332 CTTGTATTTTTGTTGGCTATGCCCAAAAAAAATTCAGCTAAAAACTCAAAAG-GGACAAGATTTT
573 CTTGTATTTTTGTTGGC-ATGCAC-AAAAAAATTCAGCTAAAAACTC-GAAGTGTACAAGATTTT
* *
14409396 GTGACCATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAA
635 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
*
14409461 AATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCGGAGGTTTGATGAGGGATAGGGGGCCAATA
700 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAATA
* * *
14409526 TAAGGGCCAAGTACCAGCACCCATCGCTCATCATGTGCACAC-CCCCCAGG-CCCCCGATCGTCG
764 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCG
* * * * * *
14409589 GAACCCTCAATGCCACCGATCAGGTTCTCTGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAA
829 GAACCC-CAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAA
*
14409654 AATGTGGCAC
893 AATGCGGCAC
* *
14409664 CAGCAAATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC-T----T----
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
*
14409720 A-G-A-T---T-TG----GA-----AA-GAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* *
14409768 TGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCAGGTCCCCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* ** ** *
14409833 CGTGCTGCCGA------T-CAG-AA--CTCGGGGCAATCTGATCTTAGACTGGGAATGAACTCCA
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * **
14409888 TATGCCTAAGCCAACCGAAGAAACGAGCAGGCGGACGAGC--GGGCGGGCACTATGCCGGCCAGA
261 TATGCCTAAGCCAACCGACGAAA-GAACGGGCGG-CGGGCGAGGGCGGGCACTACACCGGCCAGA
* *
14409951 GAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*
14410016 CTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* *
14410081 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGA
454 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGA
** * * *
14410146 TTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCCAAAACTTGGTGGACATGATCCTTGTATTTTT
519 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
14410211 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
584 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
*
14410276 AAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
649 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
14410341 TTTAAGGGGGTGTGAGTTGTCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
714 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
14410406 AGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCGATCATCGAAACCCCAATGCCG
779 AGCACCCATCGCACATCATGTGCGCACACCCCCT-GGCCCCCCGATCGTCGGAACCCCAATGCCG
* *
14410471 CCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATGCGGCAC
843 CCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * *
14410531 CAGCACATGCCCGAACCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
*
14410596 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAA-CCACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * *
14410660 TGCAGGCACTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGAATCCCCTTTT
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG-GTCCCCCTCT
* * *
14410725 GCGTGCTGCCAATCCTGCTGCCCCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCC
195 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * * * *
14410790 GTATGCCTAAGCCAACCGATGAAACGAGCGGGCGAACAGGCGA--GCGGCCACTACACCGGCCAG
260 GTATGCCTAAGCCAACCGACGAAA-GAACGGGCG-GCGGGCGAGGGCGGGCACTACACCGGCCAG
* * *
14410853 AGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGATTTAGGTACATCTTCATATT
323 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
14410918 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATATAGTGGTCCCTTAAGCCTTCACGTG
388 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * ** *
14410983 AAGTTTCTTGGTAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
453 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAG
* ** * * * *
14411048 ATTTTTTTAAATTTTTTCAAAAGGAGTTTTGGCCCCAAACCTGGTAGACATGATCATTTTATTTT
518 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
14411113 TGTTGGCATGCATAAAAACATTCAGCTAAAAAATTGAAGTGTACAAGATTTTGTGACCATTTGAA
583 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
14411178 AAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
648 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
14411243 CTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
713 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
** *
14411308 CAGCACCCATCGCACATCATGTGCGC-C-CCCCC--GCCCCCCGATCACCAGAACCCCAATGCCG
778 CAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCGGAACCCCAATGCCG
* * ** *
14411369 CCAGTCAGGTTCTCCAGCGATGCTCC-A-GCATGGTGCCCCGGTGAAGAAAAATGCGTCAC
843 CCGGTCAGGTTCTCCGGCGATGCTCCGACG-ATGGTGCCCCGACGAAGAAAAATGCGGCAC
*
14411428 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * * *
14411493 ATGAACTCCCTACGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCA-TAAGACGAGC
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA-ACGAGC
** * * * *
14411557 GTGCGGGCGCTCAGCCTACCAGTGGGGCAGGATGCGCAAGCCAGGGATTCGGTTGGGT--CCC-C
130 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTC
* * *
14411619 --C-T-CTG-CG----TGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTC
194 TGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * * *
14411675 CGTATGCCTAAGCCAACCGACGAAACAAACGGGCGGGCGGGC--GGGCGGGCACTACGCTGACCA
259 CGTATGCCTAAGCCAACCGACGAAA-GAACGGGC-GGCGGGCGAGGGCGGGCACTACACCGGCCA
* * * *
14411738 AAGAGACGGGATGCGTAAGCCGTGGATCGATAGGTTGGTAGCTGGGTTTAGGCACATCTTCATAT
322 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* * * * * **
14411803 TTGTACGTGCCAATGCCA-TTTTATGGCTTGTAAATTCATAGAATGGTCTCTTAAGCCTTCACAA
387 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* *
14411867 GAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGA
452 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA
* * *
14411932 GATTTTTTAAAATTTCTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
517 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
14411997 TTGTTGGCATGCACAAAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
582 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
14412062 AAAAAGTGTCCCCCTTTCAGACACTTTAATGGCTACTGGCAGCAAACCGGTAAAATCTCAAATGC
647 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
14412127 TCTTTAAGGGGGTGTGAGTTGTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
712 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
14412192 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCAATCGCCGGAACCCCAATGCC
777 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCGGAACCCCAATGCC
** * * **
14412257 ATCGGTTAGGTTCTCCGACGATGCTCC-AGCGATGGTGCCCCGGTGAAGAAAAATGCGGCAC
842 GCCGGTCAGGTTCTCCGGCGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * *
14412318 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTTGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
*
14412383 ATGAACTCCGCATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * *
14412448 TGCGGGCACTCTGCTGGCCAGAGGGGCAGGATGCGCAAG-CGAGGATCGGTCGGGTCCCCCTCTA
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * ** *
14412512 CGTGCTGCCGATCCTGCTGCCACAACCCTTGGTTCGGTCCAATCTTAGACTGGGAATGAACTCTG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * *
14412577 TATGCCTAAGCCAACCGACGAAATG-A-GCG-GGCGGGC-A-GGCAGGCACTACATCGGCCAGAG
261 TATGCCTAAGCCAACCGACGAAA-GAACGGGCGGCGGGCGAGGGCGGGCACTACACCGGCCAGAG
* * *
14412637 GGACGGGATGCGGAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
325 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
*
14412702 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACGTGAA
390 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* * ** *
14412767 GTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTTGAGAT
455 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGAT
*
14412832 TTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTA-TTTTA
520 TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * * *
14412895 TTAGCATGCCACAAAAAAATTTAGCTAAAAA-TCAAAGTGTACAAGATTTTGTGACGATTTGAAA
585 TTGGCATG-CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
*
14412959 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTC
649 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * *
14413024 TTTAAGGGGGTGTGAGTTCTTGAGGTTTGGTGAGAGATAGGGGGCCAATATAAGGGCCAAGCACC
714 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * *
14413089 AGCACCCATCTCACATCATGTGCGCACACCCCC-GGCCCCTCCGATCGCCGG-ACCCTAATGCCG
779 AGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCC-CCGATCGTCGGAACCCCAATGCCG
* * * * * * *
14413152 TCGATCCGGTTCTCCGACGATCCTCCAACGATGGTGCCCCAACGAAG-AAAATGCGGCAC
843 CCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * *
14413211 CAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACACTCGGTCTGGTGC-GATCTTAGATTGGG
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT-CTGATCTTAGACTGGG
* * * * *
14413275 AATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTATGCTTATGTGAACCCAAGAAACGAGC
65 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * * * *
14413340 ATGCTGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATTGATCGGGTCCCCTTCT
130 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT
* ** * * * * **
14413405 GTGTGCTATCGATCCTACTACCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCC
195 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * * **
14413470 GGATTCCTAAGCCAACTGACGAAACGAACGGGCGG-GTGG-GAGGGCGGGCACTACGTCGGCCAG
260 GTATGCCTAAGCCAACCGACGAAA-GAACGGGCGGCG-GGCGAGGGCGGGCACTACACCGGCCAG
* * * *
14413533 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGTACATCTTTATGTT
323 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * * *
14413598 TTTGCATGCCAATGCCATTTTTATGGCTTCTAAATTCATATC-GTGGTCCCTTAAGCTTTCATGT
388 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA-CAATGGTCCCTTAAGCCTTCACGT
* * *
14413662 GAAGATTCATGGAAAGATGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTA-----C--
452 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA
14413720 G----------A--TTTTC------A-----------AAACTTGGTAGACGTGATCCTTGTATTT
517 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
14413756 TTGTTGGCATGCACAAAAAAATTTAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
582 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
14413821 AAAAAGTAGCCCCCA-TTCAGGACACTTTAATGGCTAGTGGCAGCAAACCTGTAAAATCTCAAAT
647 AAAAAGT-GTCCCCATTTCA-GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * * *
14413885 GCTCTTTAAAGGGGTATGAGTTCTTGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAG
710 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * ** * *
14413950 CACCAGCACCCATCTCACATCATGTGCGCACACCCCCCCAGCCCCCTCGATCGCCGGAACCGCAA
775 TACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGGCCCCC-CGATCGTCGGAACCCCAA
* * * * **
14414015 TGCCGTCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTACCCC-AGTGAAGAAAAATGTTGCA
838 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCA
14414079 C
902 C
* * *
14414080 CAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCAGTCTGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * * * * *
14414145 ATTAACTCCGCATGCTTAGACTGGGAATGTACTCTGTATACCTAAGTCAACCAACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * *
14414210 TGCGGGCACTCAACCGGCCAGAGGGGTGGGATGTGTAAGCTGGGGATCGGTCGGGTCCCCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * **
14414275 CATGCTGCCAATCCTGCT-CCTGCAACCCTCAGTTCGGTCCAATCTTAGACTGGGAATGAACTCC
196 CGTGCTGCCGATCCTGCTGCC-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * * **
14414339 GTATGCCTAAGCCAACCGACAGAACGAAAGGATG-GGCGGGCGA--GCAGGCACTACACCAACCA
260 GTATGCCTAAGCCAACCGAC-GAAAGAACGG--GCGGCGGGCGAGGGCGGGCACTACACCGGCCA
*
14414401 GAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTCA-GTGGGTTTAGGCACATCTTCATA
322 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT-AGGTGGGTTTAGGCACATCTTCATA
*
14414465 TTTTCTGCATGCCAATGCCATTTTTATGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
386 -TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* ** ** *
14414530 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGGAAACTTTTTTTGGTTT
450 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
* *
14414595 GAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGG-CCCAAAATCTGGTAGACGTGATCCTTGTA
515 GAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTA
* *
14414659 TTTCTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
579 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
*
14414724 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAA
644 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* *
14414789 TGCTCTTTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAA
709 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* *
14414853 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCACCCGGCCCCCCGATCGTCGAAACCCCA
774 GTACCAGCACCCATCGCACATCATGTGCGCACA-CCC-CCTGGCCCCCCGATCGTCGGAACCCCA
** ** * * *
14414918 ATGCTACCGGTCAGGTTCTTTGGCGATGCTCCGGCGATCGTGCCCCGACGAAGAAAAATGCAGCA
837 ATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCA
14414983 C
902 C
* * * *
14414984 CAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAATCCTTGGTCCGATCTGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* *
14415049 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAATCCACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* *
14415114 TACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGG-CGGGGTCCCCCTCT
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCT
* * * * * *
14415178 ACGTGCTGCTGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTATACTAGGAATGAACTCC
195 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * * * *
14415243 GTATGCCTAAGCCAACCGACGACACAGCGGGCGG-GTGG-GAGGGCAGGCACTACGCCGGCCAGA
260 GTATGCCTAAGCCAACCGACGAAAGAACGGGCGGCG-GGCGAGGGCGGGCACTACACCGGCCAGA
* *
14415306 GAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * * *
14415371 TTGCGTGCCAAAGCCATTTTTATGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAGTG
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-GTG
* ** * *
14415436 AAGTTTCATGGCAAGACGACCCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGG
453 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAG
* *
14415501 ATTTTTTAAAATTTTTTCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTT
518 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
14415566 GGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCTTTTGAA
583 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
14415631 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAGCTGTAAAATCTCAAATGCT
648 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
14415696 CTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTAC
713 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * * *
14415761 CAGCA-CCATCTTCACAT--TGTGCGCACACCACCTCCGCCCTCCGATCGTCGGAACTCCAATTG
778 CAGCACCCATC-GCACATCATGTGCGCACACCCCCT-GGCCCCCCGATCGTCGGAACCCCAA-TG
* * * * * * *
14415823 CCGTCGGTCA-GTTCTCCGGTGATCCTACGGCGATGATGCCCC-A-AAAGAAAAAT---GCAC
840 CCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * *
14415880 CAGCACATGCCCAAGCCCAGCATGTGATGTCTGAAACCCTC-GTCCGGTCTGATCTTAGACTTGG
1 CAGCACATGCCCGAGCCCAGCATGTGCTG-CCGCAACCCTCGGTCCGGTCTGATCTTAGAC-TGG
**
14415944 GAATGAACGTAAAAGTATGC----ACTAGGGAATGAA---CGT-TG-C-AAGTCAACCCACGAAA
64 GAATGAAC-T--CCGTATGCTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * *
14415999 TGAGCGTGCGGGCACTCAGCCGACCAGAGGGACGGGATGCGCAAGCCGAGGATCGGTCGGGTACC
125 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCC
* * * * * * **
14416064 CCTCTTCGTGCTGTCGATCCTTCTGCCACAACCCTCGATCTGGTCCAATCTTAGACTGGGAATGA
190 CCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
* * * * * *
14416129 ACTCCGTATTCCTAGGCCAATCGATGAAACGAAC--G-GGCGGGC--GGGCGGGCACTACGCCAG
255 ACTCCGTATGCCTAAGCCAACCGACGAAA-GAACGGGCGGCGGGCGAGGGCGGGCACTACACCGG
* * *
14416189 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACGTCTTCA
319 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
*
14416254 TATTTCTGCACGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
384 TATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * *
14416319 CGTGAAGTTTTAATGGCAAGACGACTCGTTTTCTATATTTCATGATTTTCAGAACTTTTTACGGT
449 CGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGT
* *
14416384 TC-AGGATTTTTAAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTG
513 TCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
14416448 TATTTTTGGTGGCATGCACAAAAAAATTCAGCTAAAAACGCGAAGTGTACACGATTTTGTGACCA
577 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * * * *
14416513 TTTTAAAAATGTGT-CCCATTTCAAACACTTTAATGGCTACTGGCAGTAAACTTGTAAAATCTCA
642 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * *
14416577 AGTGCTCTTTAAAGGGGTGTGAGATCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
707 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
14416642 AAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCGGAACCCCA
772 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCGGAACCCCA
* ** *
14416707 ATGCCGCCGGTCAGGTTCTCCGGTGATGCTGCAAACGATGGTGCCCCGACAAAGAAAAATGCGGC
837 ATGCCGCCGGTCAGGTTCTCCGGCGATGCT-CCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
14416772 AC
901 AC
* * * * * *
14416774 TAGCACATGCCCAAGCCTAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGATTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
** * * * *
14416839 ATGAACTTTGTATGCCTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAGGAGTG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* ** * * *
14416904 TGCGGGCGCTCCGCCGGCCAGAGGGGTAGGATGTGCAAGCCGCGGATCGGCCGGGT--CCC-C--
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * *
14416964 C-T-CT----A-CGTGCTGCCGCAACCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCA
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * * *** *
14417022 TATGCCTAAGCCAACCGATGAAACGAGCGGGCGG-GCGG-GTGGGTGGGCACCACGTTGGCTAGA
261 TATGCCTAAGCCAACCGACGAAA-GAACGGGCGGCG-GGCGAGGGCGGGCACTACACCGGCCAGA
* * *
14417085 GAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * *
14417150 CTGCATGCCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGACCCTTAAGCCTTCACATGA
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * **
14417215 AGTTTCATGGCAAGACGACTGGTTTTCTTTTTATTCACGATTTTTGAAACTTTTTACGGTTCGAG
454 AGTTTCATGGCAAGACGACTCGTTTTCTATTT-TTCACGATTTTCAAAACTTTTTACGGTTCGAG
* * * *
14417280 ATTTTTTAAAAATGTTTT-GGAAGCTA-TTTTGGCCCCAATCTTGGTAGACGTGATCCTTGCATT
518 ATTTTTT-AAAATTTTTTCGGAAG-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
14417343 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
581 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
14417408 AAAAAAGTGACCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
646 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
14417473 CTCTTTAAGGGGGTGTGAGTTTTCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGT
711 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * *
14417538 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAGACCCCCCGATCG-CCGAAACCCAATG
776 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGGCCCCCCGATCGTCGGAACCCCAATG
* ** * * * *
14417602 CCGCCGATCAGGTTCTCCGTTGATGCTCCGGCGGTGGTGCCCCGACGAAG-AAAACGTGGCAC
840 CCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * *
14417664 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCTGATCCGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * * * *** **
14417729 ATGAACTCCGTATGCCTAAGTCAACCCAT-AGAATGAGCGTTGCGAGGGTAT-CC-AAGGGGAGG
66 ATGAACTCCGTATG-CTTAG---A--C-TGGGAATGAAC--T-C---CGTATGCCTAAGTCAACC
* * * * * * *** *
14417791 GATAGAAATCGAG-GATCGACGGTCCCCTCTG-CGTGCTGTTC-GATCGGGCCCTCAGGTCGTCT
118 CA-CGAAA-CGAGCG-T-G-CGG-GCGCTCAGCCG-GC----CAGA--GGGGCGGGATG-CG-C-
* * ** * * ** * ** *
14417853 TAGACTAGGAT-GAACTCCTGAGG-ACCCCGATG-G-GCGGGCCGGGCCT--TAGCCAGGAA--C
167 AAGCCGGGGATCG--GT-C-G-GGTCCCCCTCTGCGTGC-TGCCGATCCTGCT-GCC-GCAACCC
* * ** * * * *
14417910 -GGGAGCCATGGATC-GATAGGGTGGCAAGTGGGTTAGCACATCTTGCATACTTC-TACGGCCTG
224 TCGG-TCC--GG-TCTGAT--CTTAG--ACT-GG---G-A-A---TG-A-ACTCCGTA-TGCCT-
**** * * * * * * * * **
14417972 GACATGGTGCCCTGACG-AAGAGCGGCCCAGCAATGCCCAAGCCCAGCATGTCTACGCACCTCGT
268 -A-A-GCCAACC-GACGAAAGAACGG-GCGGC--GGGCGAGGGCGGGCA---CTA--CA-C-CG-
* * * ** * * ** * * * * * * *
14418036 CTGATCC-GATCTTAAAC-GAAAACGTATGCTATGTAACCCGAAATGAGTGTGT-GG-GCGCTCA
318 --G--CCAGA---GAGACGGGATGCGCAAGCCGTG-GA-TCGATA-GGGTG-GTAGGTGGGTTTA
* * * **** * * * * * * * ***** * *
14418097 -AC-CAGC--CAGAGGGGTGGGATGCGTAA-GTCAGGATTTAACCGGGTCCCCCATGCACACTGC
372 GGCACATCTTCATATTTCT-GCATGC-CAATGCCA--TTTTTA-TGGCTTGTAAAT--TCA-T-A
** ** * * * *
14418157 CAATCCTGCTGTTGCAA-CCTTC-GGTTCGATCCAATCTTAGACTAGG-AATGA--ACTCCGTAT
428 CAATGGT-CCCTT--AAGCCTTCACG-T-GA---AGT-TT-CA-T-GGCAA-GACGACT-CGTTT
* **** * ****** * ****** ** * ****
14418217 GC-ATAAGCCAACCGA----CGAAACAAGCGGGCGG-GCG-G-GCGGGCAGGCACTACGCCGGCC
479 TCTATTTTTC-A-CGATTTTCAAAAC-TTTTTACGGTTCGAGATTTTTTA-AAATTTTTTCGG--
*** * * * * *** * ** **
14418274 AGAGAGACGGGAT-G-CGCAAGCCGTGG-A-TCGAT-AGGGTGGTAGCTGGGTTTAGGCA--CAT
538 A-AG-GA-GTTTTGGCCCCAA-ACTTGGTAGACG-TGATCCTTGTATTTTTG-TT-GGCATGCA-
*** * * * *** * * ** * ** * * * * *
14418332 CTTCATATTTCTGCGTGCCAA-T-GCCA-TTTTTATG-GCTTGT-A-AATTCGTACAATG-GT-C
595 CAAAAAAATTCAGC-TAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * * * * * * * ** * *
14418389 CC--TTAAG-C-CTTCACGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTTTTCATGATTTT
658 CCATTTCAGACACTTTA-ATG--GCTAC-TGGC-AG-CAAACC--TGT-AAAATCTCA--A---A
* * * * * * ** ** * * * ** **
14418450 TGAAACT-TTTTA-TGGTTCGGGATTTTTTAAAATTT-TTCAAAAGGATTTTTGGCCCCAAACTT
709 TG---CTCTTTAAGGGGGT-GTGAGTTCTCGAGGTTTGAT--GAGGGA--TAGGGGGCC-AA--T
* * ** *** **** ** ** * * ** *
14418512 GGTAGACGTGATCCTTGTATTTTTGTTGGCAT-GCACAAAAAAATTCAGCTAAAAACTC-GAAGT
763 -ATA-A-G-G-GCCAAGTA--CCAGCACCCATCGCAC-ATCATGTGC-GC-ACACCCCCTG--G-
*** ** * * * ***** *** * * *** * *
14418575 GTACAAGAT-TTTGTG-A--CCATTTGAAAAAAGTGTCCTCATT-TCAGAC-A--CTTTAATGGT
815 CCCCCCGATCGTCG-GAACCCCA-ATG-CCGCCG-GT-CAGGTTCTCCGGCGATGCTCCGA-CGA
* ** * * * **
14418632 TGCTGGCAGCAAGCCTGTAAGATCTGAAATGC-TCTT
874 TGGT-GC--CCCGAC-G-AAGA---AAAATGCGGCAC
* *** * * * * * * * ** * * ** *
14418668 TA--AGGGGGTCTGAGTTCTCGAG-GTTTGATG-AGGGA---TAGG---GGGCCAAT-ATA-A--
1 CAGCA-CATGCCCGAG--C-CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACT
* ** * * * * * ** ** ** * *
14418719 GGGCCAATATAAGGGCC--AAGCTCCAGCACCCATCGCACATCATGTGCGCACACCCCCT-GGCC
62 GGG--AAT-GAA-CTCCGTATGCT-TAG-A--C-TGGGA-ATGAACT-C-CGTA-TGCCTAAGTC
** * ** * * * * * * * *** *
14418781 CCCCCGATCGTCGGAAC-CCCAATGCCGTCGGTAAGGTTCTCTGAC-GATGCTCCGGTGATGGTG
114 AACCC-A----CGAAACGAGC-GTGCGGGCGCTCA-G--C-CGGCCAGA-GGGGCGG-GAT-GCG
** * *** **** * * * * * *
14418844 CCTCGGCAAAGAAAAAT-GTGG-CACCAGCACATG-G-CCAAGCCCATCATGTGCTGCCGCAACC
166 -CAAGCCGGGGATCGGTCG-GGTC-CC-CCTC-TGCGTGC-TGCCGATC--CTGCTGCCGCAACC
* * * * * * * *
14418905 CTCGGTCCAGTCCGATCTTAGACTGGAAATGAACTCCGTAAG-CTTAG---A-CTAGGAATGAAC
223 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAGAAC
** *** * * * * * * ** * * **
14418965 -TCCGTATGCCTAAGTC---AAC--CAAC-GAAATGAGCGTACGGGCGCTCAGCCGGCTAGAGGG
288 GGGCGGCGGGCGAGGGCGGGCACTACACCGGCCA-GAGAG-AC-GG-GAT--G-C-GC-A-AGCC
** ** * **
14419023 GTGG---GATGCGCA---AGCT-GG----GG---ATCGGC------CT---TGCCAATGCCA--T
343 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * * * * *
14419063 TGATGGCTTGTAAATTCATGCAATTGTCCCTTAAGCCTTCAAGTGAGGTTTCATGGCAAGATGAC
408 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
** ***
14419128 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTGGTGGTTCGAGATTTTTTAAAATTTTTTCGG
473 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGG
**
14419193 AAGGAGTTTTGG-CATAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
538 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * *
14419257 TTCAGCTAAAAACTCAAAGTGTTCAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCTGA
603 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
14419322 TACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCACTTT-AGGGGGTGTGAGTTC
668 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
14419386 TCGAGGTTTTATGAGGAATAGGGAGCCAATATAAGGGCCAAGTAGCAGCACCCATCGCACATCAT
733 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * *
14419451 GTGCGCACACCACCCCGCCCCCCCGATCGTCGAAACCCCAACGCCGTCGGCCAGGTTCTTCGGCG
798 GTGCGCACACC-CCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* *
14419516 ATGCTTTCGACGATGGTGCCCCGACGAAGAAAAATGCAGCAC
862 ATGC-TCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * * * *
14419558 CAGGACATGCACGAGCCCAGCATGTGCTACCGTAACCCTCGATCCAGTCTGATCTGAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* *
14419623 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * ** *
14419688 TGCAGGCGCTTAGCCGGCCAGATGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * * *
14419753 CGTGTTGTCGATCCTGCTACCGTAACCCTCGGTCTGGTCTGATCGTAGACTGGGAATGAACTCCG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * *
14419818 TATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGTGGGCGGGCGGGCGGGCACTACACCGGCTA
261 TATGCCTAAGCCAACCGACGAAAGAA-CGGGC-GGCGGGC--GAGGGCGGGCACTACACCGGCCA
* * *
14419883 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGTGTTTAGGTACATCTTCATAT
322 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* * *
14419948 TTTTACATGCCAATGCCATTTTTATGGCTTGTAAATCCATACAATGGT-CCTCTAAGCCTTCACG
387 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT-TAAGCCTTCACG
* * **
14420012 TGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTC-
451 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCG
* * * *
14420076 AGGATTTCTTAAAATTTTTTTGGAAGGAGTTTTGTCCGCAAACTTGGTAGACGTGATCCTTGTAT
516 A-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
14420141 TTTTGTTGGCATGCACAAAAAAATTTAG-TGAAAAACTCAAAGTGTACAAGATTTTGTGACCATT
580 TTTTGTTGGCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATT
14420205 TGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACTGGCAGCAAA-CTGTAAAATCTCAA
644 TGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
* **
14420269 ATGCTCTTTAATGGGGAATGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCA
708 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * * *** ** *
14420333 AGTACTAGCACCCATCACACATCATGTGCGCACTACGCCGGCCAGAGAGACGGGAT-G-CGCAAG
773 AGTACCAGCACCCATCGCACATCATGTGCGCAC-AC-CC--CCTG-GCCCCCCGATCGTCGGAA-
*** ** * * ** * * * ** * * * *
14420396 CCGTGGATCGATAGGCTGGT-AGGTGTGTTTAGGCACAT-CTTC-A-TATTTCTACATGCCAATG
832 CC-CCAAT-G--CCGCCGGTCAGGT-T-CTCCGGC-GATGCTCCGACGA-TGGTGC--CCCGACG
* ***** ** *
14420457 CCATTTTTATGGCTTGTAAATT
887 -AAGAAAAAT-GC--G-GCA-C
* * *** * * * ** * ***
14420479 CA-TACAATGGTCCCTTAAG-CTTTCAAGTGAACTTTCATGGCAA-GAT-GACTCATTTTCT-AT
1 CAGCAC-AT-G-CCC--GAGCCCAGCATGTG--C-TGC--CGCAACCCTCG-GTC-CGGTCTGAT
*** **** * * * * ***** * * **
14420539 -TTTTTCATGATTTTTGAAACT--TTTTGC--AG-TTCGGGATTGTTAAAAATTTTTTCGGAAG-
54 CTTAGAC-TG-GGAATG-AACTCCGTATGCTTAGACT-GGGAATG--AACTCCGTATGCCTAAGT
* * ** * * ***
14420597 GAATTTTGGCCC-C-ACACTTG-GTAGACGTGATC-CTCGTATTTTTGTTGGCGTGCACA-AAAA
113 CAA------CCCACGAAACGAGCGT-G-CG-G-GCGCTC--A--------GCCG-GC-CAGAGGG
***** * * * * *** ** * * * * *
14420657 AATTCA-GCGCAAAACTCGAAGTGTATAAGATTTTGTTACCATTTGAAAAAAGTG-TCCCCAT--
156 GCGGGATGCGC-AAGC-CG--G-GGAT-CGGTCGGGTCCCCCTCTG-----CGTGCTGCCGATCC
** * * ***** * * * ** **
14420718 TTTTAGACACTTTAGT-GGCTACCGG-CAGCAAACCTGTAAAATCT-CAAATG--CTCTTTAATG
210 TGCT-GCCGCAACCCTCGG-T-CCGGTCTG---ATCT-T-AGA-CTGGGAATGAACTCCGT-ATG
*** ***** * *** * * **** * * **
14420778 GGGAATGAGTTTTCGAGGTTTGATGA-GGGATAGG-GGGCCAATATAAGGGCTAGGTAACAGCAC
265 CCTAA-G-CCAACCGACGAAAGA--ACGGG--CGGCGGG-CGA-GGGCGGGC-A-CT-ACACCGG
* * * ** * * ** ***** * * * ******* *
14420841 CCATCGCACATCATGTGCGCACACTCCAACCCCCCGG-TCCCCCCGATCGTCGGAACCCCAATGC
319 CCA--G-AGA-GACG-G-G-ATGC-GCAA-GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *** ** * * ** * *
14420905 -CGTCGGTCAGGT-TCTTCGGTG-ATG-C--T-CCGACGATGGTGCCCCTGGCGAA--GA-AAAA
375 ACATC-TTCA--TAT-TTC--TGCATGCCAATGCC-ATTTTTATG--GCTTGTAAATTCATACAA
** * *** * * * * * * ** **
14420960 TGCGGTACCAGCACAAGCC-TGA-GCCCAGCATGTGC-TGCCATA-AC-CCTTG-GTCCGGTCCG
431 T--GGT-CC--CTTAAGCCTTCACGTGAAG--T-TTCATGGCA-AGACGACTCGTTTTCTAT-TT
* * *** *** * ** * **** **** * *
14421019 ATCATAGATTGGGAATGAACTCCGTATGCCT-AAG-TTAACCCACGAAACGAGCGTACGG--GCA
486 TTCA-CGATTTTCAA--AACTTTTTACGGTTCGAGATT-TTTTA--AAA--TTTTTTCGGAAGGA
* * ** * * * * * * ** *** *
14421080 CTCAGTTGGCCAGAGAGGCGGGATGCGTAAGCCGAGGATCGGTCGGGTCCCCT-CT-GCATGCTA
543 GT--TTTGGCCCCA-A-AC---TTG-GT-AGACG-TGATC-CTTGTAT-TTTTGTTGGCATGC-A
** *** * * ** ** * * * ** *
14421143 C-CGATCCTGC-TCTCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATG-
595 CAAAAAAATTCAGCT-A-AAAACTC-G--AAGTGT-A-C-AAGATTTTG--TG-A--CCATTTGA
*** **** * **** * * * * * ** **
14421205 CCTAAGCCAACCGACGAAACGAGCGGGC-GTGAGGGCACTACGTCGGCCAG-AGAGATG--GGAT
647 AAAAAGTGTCCCCATTTCA-GA-C--ACTTTAATGG--CTAC-T-GG-CAGCAAACCTGTAAAAT
* * * ** * **
14421266 GTGCAAGT-CGTGGATCGATAGGGTGGTCGGTTGGTTTAGGTACATCTTCACATTTTTTAGCTCC
703 CT-CAAATGC-T--CTTTA-AGGG-GGT--G-T-G---A-GT---TC-TC-GA-GGTTT-G----
**** ** ** * ** * *
14421330 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC-CTTA--AGC-CTTCA-CGTGA-AGT
743 -ATG--AGGGATA-GG-GGGCCAA-T-AT--AA-GGGCCAAGTACCAGCAC-CCATCG-CACA--
* ** ***** * * ** * **** *
14421389 TTCATG-GCAAG-ATGACTCGTTTTCTATTTTTCACGAT-TTTTGAAACTTTTTG-CG--GTTCG
794 -TCATGTGC--GCA-CAC-C---CCCT-GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTC-
* * *** ** ** * ** * * ** *
14421448 AGATT-T-TGTAAAATTTTTTTTGAAGGAGTTTTAGCCCCAAAC-TAGTTAGA--CGTG-ATC
849 AGGTTCTCCG-GCGA--TGCTCCG-ACGA-TGGT-GCCCC-GACGAAGAAAAATGCG-GCA-C
*** ** *** * ** ** * * ** ** * *
14421505 CTTTTATTTTTGTTGGCATGCACAAAAAAATTCAG-CTAAAAACTCGAAGT---GTACAAGATTT
1 C-AGCA--CATGCCCG-A-GC-CCAGCATGTGCTGCCGCAACCCTCG--GTCCGGT-C-TGATCT
* ** ** * ** * ** * ** * * * **
14421566 TGTGACCATTTGAAAAAAGTGACCCCATTTCAAACACT-TTAATGGCTACTGGCAGCAAACCT-A
56 T-AGA-C-TGGGAATGAACT--CCGTA-TGCTTAGACTGGGAAT-G-AACT--CCGTATGCCTAA
* ** * * ** * ** * ** * ** * *
14421629 -TAAAATCTC-AAATGCTCTTTAAGGG-GGTGTGACTTCTC-GAGGTTTGATGAGGGATAG-G-G
111 GTCAACCCACGAAACGAGC-GTGCGGGCGCTCAGCCGGC-CAGAGG---G--GCGGGAT-GCGCA
* *** * * ** ** * * * ** *
14421688 GGCC-AATATAAGGGCCAAGTACCAGCAC-CCAT-C-GCAC-ATAATG-TG-CGCACACCCCCCC
168 AGCCGGGGAT--CGGTCGGGT-CCCCCTCTGCGTGCTGC-CGATCCTGCTGCCGCA-A--CCCTC
*** * ** * * * * * *
14421746 GG-CCCCCCCGATCGTCGGAACCT--CAATG-TCGTCGGTCAGGTTTCCCGGTGATG-C-TCCGA
226 GGTCCGGTCTGATC-TTAG-A-CTGGGAATGAAC-TC---C--GTATGCC--T-AAGCCAACCGA
** ** ** * *** *** * * * * ** * * * *
14421805 CGACGGTGC-CCCGGTGAAGAAAAATAC-GACACCAACACATGCCCTAGCTCAGCATGTGCTACC
279 CGAAAGAACGGGCGGCG--GGCGAGGGCGGGCA-CTACAC-CGGCC-AG-AGAG-ACGGGAT-GC
* * ** * ** * * * * * ** * *
14421868 GCAA-CCCTCGG-TCCGGTCCGATCTTAGACTGGG--AATG-A-A-CTCCGTATGCCT--AAGTC
336 GCAAGCCGT-GGAT-CGATAGGGTGGTAG-GTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* **** * **** * * * * ** *
14421924 AA-CCCA-CGAAATGAGCGTGCGGGTGCTCAGCCGACCAGAGGGGCGGGATACGCAAGCCGGGGA
398 AATGCCATTTTTATG-GCTTGTAAAT--TCA---TA-CA-ATGGTC-----CCTTAAGCC----T
* * * * * *** ** ***
14421987 TCGACCGGGTGCCACTCTGCATGTTGC-TGATGCTACTGCCG-CAACCCTCAGTC-CGATTTGGT
446 TC-A-C--GTG-AAGT-TTCATG--GCAAGA--CGACT--CGTTTTCTATTTTTCACGATTT--T
* * **** * ** * *** ***** * * ****
14422049 CTTATACTGGGAATGAACTC-CG-TATGCCTAAGCCAATCGACGAAACGAAAGGGCGGGCGGGCA
497 C-AAAACTTTTTACG-GTTCGAGAT-TTTTTAA---AAT---TTTTTCGGAA-GGAGTTTTGGC-
* * ** * * * * ** * * ***** ***
14422112 CTACGCCAGCCAGATAGACGGGATGCGTAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
551 C--C-CAAACTTGGTAGACGTGAT-C-----CT-TGTAT--TTTTGTTGGCA--TGCACAAAAAA
* * * ** * * * * * *
14422177 A--CATCTTCATATTTCTACGTG-CCAATGCCATTTTTATG-GC--TTGTAAATTCATACAATGG
602 ATTCAGC-TAAAAACTCGAAGTGTACAA-G--A-TTTTGTGACCATTTG-AAA---A-A-AGT-G
* * * * * * ** * * ** *
14422236 T-TCC--TTAAG-C-CTTCACGTGAAGTTTCATGGCAATAAGACTCATTTTCTATTTTTCACGAT
655 TCCCCATTTCAGACACTTTA-ATG--GCTAC-TGGCAGCAA-AC-C--TGT-AAAATCTCA--A-
* * * ** * * ** ** ** * ** **
14422296 TTTTGAAACT-TTTTATGGTTTCG-GATTTTTTAAAATTTTTTCGAAAAGTG-TCTTGGCCCCAA
708 --ATG---CTCTTTAAGGGGGT-GTGA-GTTCT-CGA-GGTTT-GATGAGGGAT-AGGGGGCC-A
* * ** * *** * *
14422358 ACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAA
761 A--T-ATA-A-G-G-GCCAAGTA---------CCA-GC----ACCCA-TC-GC---ACA-TC-AT
** ***** **** ***** * * * ** * *
14422423 GTGTACA-AGATTTTGTGACCATTTGAAAAAAGTG-ACCCCATTTCAGACACTTTAATGGCTACT
798 GTGCGCACACCCCCTG-G-CCCCCCGATCGTCG-GAACCCCAATGCCG-C-CGGTCA-GG-TTCT
* * * * * * * * ** * *
14422486 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCAAGGTTTGATGAGG
856 -CCGGC-GA--TG------CTC---CG-AC--GATGGTGCCCCGA---C-GAA-----GA--A--
* * * *
14422551 GATAGGGGGACAATAT
892 -AAATGCGG-C---AC
* * * * * * * ** *
14422567 AAGGGC-CAAGTACCAGCACCCATCACACATAATG-TG-CGCACACCCCCCCGG-CC-CCCCGAT
1 CA--GCAC-A-TGCCCG-AGCC--CA-GCAT-GTGCTGCCGCA-A--CCCTCGGTCCGGTCTGAT
* * ** * * ** * ** ** *
14422627 C---G-C--CG--T-TAC-CCCAATGC---CACCGGTCAGGTTCTCCGGTGATG-CTCCGGCAA-
54 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC-GT-ATGCCTAAGTCAAC
* *** ** * ***** * * ** * * ** *
14422677 -C-GGTGCCCTG-GTGAAGAAAAAT-ATGGC-ACCA-A----C-ACATGCCCTAGCCCAGCAT-G
117 CCACGAAACGAGCGTG-CGGGCGCTCA-GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
* ** * * * * **** *
14422730 TGCTAC-CGTAACCCTC--AGTTCAGTCCGATCTTAGACTAG--G-AATGAAC--TCC-GTATG-
180 -G-T-CGGGTCCCCCTCTGCGTGCTG-CCGATCCT-G-CT-GCCGCAACCCTCGGTCCGGTCTGA
* * * * *
14422785 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGACTGCTCAG
238 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-GAACG---GGC-G-GC-G
* * * * ** * * *
14422849 TAGGCCAGAGGG-GTAGG-A-TGCATGCTGCC---GA-TCCTGCTGCTGCAACCCTCAGTCCGAT
296 --GG-C-GAGGGCG--GGCACTACA-CCGGCCAGAGAGACGGGATGC-GCAA-GC-C-GT-GGAT
* * ** ** * * * ** * *** **
14422907 CTGATATTAGACTGTGAATGAACTCCGTAT-GCCAAAGCCAACCGACGAAACGAGC-GACGGGCG
349 C-G--A-TAG--GGTG-GT-AGGTGGGTTTAGGC--A--C-ATCTTC-ATA-TTTCTG-CATGC-
* ****** * * *** * * *
14422970 GGC-AGGCGGGAACTA-CGC-TG-ACCAGAGAGACGGGATGCG-CAAGCCGTGGATCGATAGGCT
397 --CAATGCCATTTTTATGGCTTGTA-AATTCATAC--AATG-GTC---CC-T---T--A-AGCCT
* * * * * * * ** * * ***
14423030 GGT-AGGTG-GGTTT-A-GGCATA-TC--TTCATATTTCTGTGTGCCAATGCCATTTTTATGGCT
446 --TCACGTGAAGTTTCATGGCA-AGACGACTCGT-TTTCTATTTTTC-A--CGATTTTCAAAACT
* ** **** * *
14423088 TGCCTTCAC-G-T-GA-ACTTTCATGGCAAGACGACTCGCTTTCTATTTTTCATGA-TTTTTG--
504 T---TTTACGGTTCGAGA-TTT--T-TTAA-A--A-----TTT-T-TTCGGAAGGAGTTTTGGCC
** * * * * * * ** ** ** ***
14423146 --AAACTTTTTATGGTTCGAGAT-TTTTTAAAATTTT-TT--C--G--GAAGGATTTTTGGCCCC
552 CCAAACTTGGTA--G-ACGTGATCCTTGT--ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* * ** ****
14423201 AAACTTGGTAGACGTTGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTCAGCTAAAAACTT
612 AAAC-TCG-A-A-G-TG-TACAAG-A-TTTTG-T-G-A--C-CATTTGA----------AAA---
*** ** * ** **
14423266 GAAGTGTACAAGATTTTTGAC-CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
650 -AAGTGT-CCCCATTTCAGACAC-TTT-----AA-TGGCTAC-TGGCAG-CA----AA---C--C
* * * * * * * * * ** *
14423330 TGGCAGCAAACCTATAAAATATCAAATGCTCATTAAGGGG-GTGTGAGT-TCTCGAGGTT--TGA
695 T-GTA--AAA--TCTCAAAT-GC---T-CT-TTAAGGGGGTGTGAG-TTCTCGAG-GTTTGATGA
* * * * * * * ** * * * *
14423391 TGAGG-GATAGGGGGCCA-ATATAAGGGCCA--AGTACCAGCACC--CATCACA-CATCATGTGC
747 -G-GGATA-GGGGGCCAATATA-AGGGCCAAGTACCAGCA-C-CCATC-GCACATCAT-GTGCGC
* * * * * *
14423449 GCACACCCCCGCCCCCCCGATCATCGGAACCCCAATGCCTCCGGTCAGGTTCTCCGGTGATGCTC
804 ACAC-CCCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC
* * *
14423514 CGACGATGGTGCCCCGACAAAGAAAAATACGACAC
868 CGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* ** * * *
14423549 CAACACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCGATCCGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * *
14423614 ATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGTG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * ** *
14423679 TGCGGGTGCTCAGTCGGCCAGAGGCGCGGGATGTACAAGCCGGGGATCGATCGGGTCCCCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * * **
14423744 CGTGCTGTCGAACCTGTTGCCGTAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * *
14423809 TATGCCTAAGCCAACCGACG--A-AACGAGCGGGCGGGC--GGGCGAGCACTGCGCCGGCCAGAG
261 TATGCCTAAGCCAACCGACGAAAGAACGGGC-GGCGGGCGAGGGCGGGCACTACACCGGCCAGAG
*
14423869 AGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
325 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
*
14423934 TGCATGCCAATGCCATTTTTATGGCTTGTAAATCCATACAATGGTCCCTTAAGCCTTCACGTGAA
390 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* ** * * *
14423999 GTTTCATGGCAAGACGACTCGTTTTCTA-TTTTCATGATTTTTTGAAACTTTTTGCGGTTTGGGA
455 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAACTTTTTACGGTTCGAGA
* *
14424063 TTTTTTAAAATTTTTTCGAAAGGAGTTTTGG-CCCAAACTTGGTAGACGGGAATCTCTTGTATTT
519 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG-ATC-CTTGTATTT
*
14424127 TTGTTGGCATGCACAAAAAAATTTAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCA-TTGA
582 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
14424190 AAAAAGTGTCCCCATTTCAGACACTTTATTGGCTACTGGCAGCAAACCTATAAAATCTCAAATGC
647 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
14424255 TTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
712 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* ** * * * *
14424320 CCAGTACCCATCATACATCCTGTGCGAACACCCCC-GACCCCACCGATCGTCAGAACCCCAATGC
777 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCC-CCGATCGTCGGAACCCCAATGC
* * ** * * **
14424384 CGTCGGTCAGGTTCTCCGGCGATGCTTCGGTGATGGTGCCTCGATGAAGAAAAATATGGCAC
841 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * *** * * * *
14424446 CAACACGTTCTTTAGCCCAACATGTGCTGTCGTAA----C---CC--TCAG-TC-----C---G-
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * * * *
14424492 --G---TCCG-AT-CTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCAACAAAACGAGCA
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * ** * *
14424550 TGCAGGTGCTCAGCCGGCCAGAGGGAAGGGATGCGCAAGTCAGGGATCGGTCGGGTCCCCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * ** * * * * * *
14424615 CATGCTTCCAAGCCTGCTATCGTAACCCTCAGTCTGGTCTGATCGTCGACTGGGAATGAACTCTG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * ** * ***
14424680 TATGCCTAAGCTAACCGATG--A-AACGAGTAGGCGGGC--GGGCAGGCACTACGTTGG-CAGGA
261 TATGCCTAAGCCAACCGACGAAAGAACG-GGCGGCGGGCGAGGGCGGGCACTACACCGGCCA-GA
* * *
14424739 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGCGGTAGGTGGGTTTAGGCACTTCTTCATTTTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* **
14424804 TTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * * * * * *
14424869 AGTTTCATGGCAAGACAATTCATTTTTTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGA
454 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGA
14424934 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATT-GTAGACGTGATCCTTGTATTTT
519 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTTT
* *
14424998 TGTTGGCTTGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
583 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
14425063 AAAAGGGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
648 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
**
14425128 CTTTAAGGGGGTGTGAGTTCTCG-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTT
713 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* ** * *
14425192 CGGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCCCTGATCGCCGGAACCCCAATAC
778 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGGCCCCCC-GATCGTCGGAACCCCAATGC
*** *
14425257 TATCGGTCAGGTTCT-C--C---G----G-CGAT-G-G-CCCGACGAAGAAAAATACGGCAC
841 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * *
14425305 CAACACATGCCCGAGGCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * * * *
14425370 ATGAACTCTGTATACTTAGACTGGGATTGAACTCCGTATCCCTAAGTCAACCCAGGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * *
14425435 TGCGGGTGCTCAACCGACCAGAGGGGTGGGATGTGCAAGCCGGGGATCGGTCGGGTCCCCTTTTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * ** * *
14425500 CGTGCTGCCGATCTTGTTGCTGCAACCCTCGGTCCGGTCCAATCTTAGATTGGGAATGAACTCTG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* **
14425565 TATGCCTAAGCCAACTGACGAAACGAACGGGCGGACGGGC--GGGC-GGCACTACGTCGGCCAGA
261 TATGCCTAAGCCAACCGACGAAA-GAACGGGCGG-CGGGCGAGGGCGGGCACTACACCGGCCAGA
* *
14425627 GAGACGGGATGCGCAAGCCTTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*** *
14425692 CTATGTGCCAATGCCATTTTTATGGCTTTTAAATTCATACAATGGTCCCTTAAGACC-TCACGTG
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTG
* * **
14425756 AAGTTTCATGGCAAGACGACTCGTTTTCAATTTTTCATGATTTTTGAAACTTTTTACGGTTC-AG
453 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA-
14425820 GATTTTTTAAAAGTTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
517 GATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
*
14425885 TTTGTTGGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
581 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * *
14425950 AAAAAAGTGTCCCCACTTT-AGACACTTTAATTGCTACTGGCAGCAAACCTATGAAATCTGAAAT
646 AAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * * *
14426014 GCTCTTTAAGGGGGTGTGA-TTCTCAAGGTTTTATGAGGGCTAGGGGGCCAATATAAGGGCCAAC
710 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * *
14426078 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCGATCGCCGGAACCTCAATG
775 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCGGAACCCCAATG
** * * * * *
14426142 CCGCCGGTCAGGTTCTCCGATGATGCCCCGACGATGGTGCCCTGACAAAGAAAAATGTGACAC
840 CCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * *
14426205 CAACACATTCCCGAGCCCAGCATGTGCTGCCGTAA-CC-C--T-C-G---G-TC-----C-----
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
*
14426250 A-G---TCCG-AT-CTTAGACTGGGAATGAACGCCGTATGCCTAAGTCAACCCACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * *
14426309 TGCGGGTGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGGTCAGGTCACCCTCTT
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * ** * * * *
14426374 TGTGCTGCCGATCCTGCTACCTTAACCCTCGGTCCGGTCCGATCTTGGACTAGGAATGAACTCTG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
** * ** *
14426439 TATGCCTAAGCCAACCGACGAAACGAACAAGCGG-GTG-GACGGATGGGCACTACGCCGGCCAGA
261 TATGCCTAAGCCAACCGACGAAA-GAACGGGCGGCGGGCGA-GGGCGGGCACTACACCGGCCAGA
* * *
14426502 GAGACGGGATGCGCAAGCCATAGATCGATAGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
**
14426567 CTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* ** * *
14426632 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGA
454 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGA
* * * *
14426697 TTTTTTAATATTTTTTTGGAAGGAGTTTTGGCCCAAAACTTGGTAGAAGTGATCCTTGTATTTTT
519 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * * *
14426762 GTTTG-ATGCATAAAAAAATTCATCTAAAAACTCGAAGTGTACAAGATTTTGGGACCATTTGAAA
584 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* * * * *
14426826 AAAGTGTCCCCATTTCAGACACTTTATTGCCTACTGGAAGCGAACCTCTAAAATCTCAAATGCTC
649 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
14426891 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
714 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * * *
14426956 AGCACCCATCGCACATCATATGCGTACACCCCTTTCCTCGACCCCCTCAATCGTCAGAACCCCAA
779 AGCACCCATCGCACATCATGTGCGCACA-CCC---CCT-GGCCCCC-CGATCGTCGGAACCCCAA
* * *
14427021 TACCGCCAGTCAGGTTCTCCGGC-A-------AC---GGTGCCCTGACGAAGAAAAATGCGGCAC
838 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * * *
14427075 TAACACATGCCCGAGCCCAGGATATGCTGCCACAA-CC-C--T-CAG-C----C-----C-----
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
*
14427120 --G-A-TCCG-AT-CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * ** * * *
14427179 TGCAGGTGCTCAGCCGGCCA-AGGGGCTGGATGCGTAAGCCAGGGATCGACCGAGTCACCCTCTA
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * ** * *
14427243 CGTGCTGCCAATCCTACTGCTGCAACCCTCGATCCGGTCCAATTTTAGACTGGGAATGAACTCTG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* ** *
14427308 TATGCCTAAGCCAACCGACG--A-AAC--G-AGCTTGC--GGGCGGGCACTACGCCGGCCAGAGA
261 TATGCCTAAGCCAACCGACGAAAGAACGGGCGGCGGGCGAGGGCGGGCACTACACCGGCCAGAGA
* * *
14427365 GACGGGATGCGTAAGCCGTGAATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
326 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*
14427430 GCATGTCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
391 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
** *
14427495 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGAGATT
456 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATT
* * *
14427560 TTTTAAAATTTTTTCGAAAGGAGTTTTTGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGT
521 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * * *
14427625 TGGCATGCACAAAAATATTCAGCTCAAAACTCAAAGTGTACAAGATTTTGTGACTATTTGAAAAA
586 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
14427690 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGG-AGCAAACCTGTAAAATCTCAAATGCTCTT
651 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* *
14427754 TAAGGGGCTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAG
716 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * *
14427819 CATCCATCACACATCATGAGCGCACACCCCCCTGGGCCCCCCGTTCGTCGGAACCCCAATGCCGT
781 CACCCATCGCACATCATGTGCGCACA-CCCCCT-GGCCCCCCGATCGTCGGAACCCCAATGCCGC
** ** * ** *
14427884 CGGTCAGGTTCTCCGATGATGCTCCGGTGATGGTGCCCTGGTGAAGAAAAATGTGGCAC
844 CGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * **
14427943 CAACACATGCCCGAGCCCAGCATGTCCTGCCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
** * **
14428008 ATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGTT
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * *
14428073 TACGGGTGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGAGATCGGTCAGGTCCCCCTTTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * ** * * *
14428138 CATGCTGTCGATCCTGCTACCGTAACCCTCGGTTTGGTCTGATCTCACACTGGGAATGAACTCTG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * * *
14428203 TATGGCTAAGCCAACCGAC--AA-AA--TG-AGC-GG-GTGGGCGGGCACTACGCCGGCTAGAGA
261 TATGCCTAAGCCAACCGACGAAAGAACGGGCGGCGGGCGAGGGCGGGCACTACACCGGCCAGAGA
*
14428260 GACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
326 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
14428325 ACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTACGCCTTCACGTGAAG
391 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * ** ** *
14428390 TTTCATGGTAAGACGACTCATTTTTTATTTTTCATAATTTTCAAAACTTTTTGTGGTTCGGGATT
456 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATT
* * *
14428455 TTTTAAAATCTTTTCGGAAGGAGTTTTGGCCCAAAACTTGGTAGATGTGATCCTTGTATTTTTGT
521 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* *
14428520 TGGCATGCACAAGAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAA
586 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * * *
14428585 AGTGTCCCCATTTTAGACACTTTAATAGCTACTGGCAGTAAACTTGTAAAATCTCAAATGCTCTT
651 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * *
14428650 TAAGGGGGTGTGAATTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACAAG
716 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * *
14428715 CACCCATCGCACATCATGTGTGCACACCCATTTCCCCGGCCCCTTCGATCGTCGGAACCCCAATG
781 CACCCATCGCACATCATGTGCGCACA-CC----CCCTGGCCCC-CCGATCGTCGGAACCCCAATG
* * * * *
14428780 CCGTCGTTCAAGTTCTCC-GCGATGCTCCGACGATGGTGCCCCAATGAAGAAAAATGCGGCAC
840 CCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * *
14428842 CAACACACGCCCGAGCCCAGCATATGCTGCCGCAA-CC-C--T-C-G---G-TC-----C--GG-
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
** *
14428889 -T---C-CC--AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTAACGAAACAAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * *
14428946 AGCGGGTGCTCAACCGGCTA-AGGGGC-GGATGCGCAAGCCGGGGATCGGTCGGGTCACCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * * * ** * *
14429009 CATGCTGTCAATCCTGCTACTGCAACCCTCGGTCCAGTCCAATCTTAGATTGGGAATGAACTCCA
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
*
14429074 TATGCCTAAGCCAACCGAAGAAAAGAGA-GGGCGAGCGGGC--GGGCGGGCACTACACCGGCCAG
261 TATGCCTAAGCCAACCGACG-AAAGA-ACGGGCG-GCGGGCGAGGGCGGGCACTACACCGGCCAG
* *
14429136 AGAGACGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
323 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
*
14429201 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCACGTG
388 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* ** ** *
14429266 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGGG
453 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAG
*
14429331 ATTTTTTAAAATTTTTTCGGAAGGAG--TT----------TT-G--G-CGTGATCCTCGTATTTT
518 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
14429380 TGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
583 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
14429445 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCT
648 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
14429510 TTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
713 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * **
14429575 CATCACCCATTGCACATCATGTGCGCACACCCCCCGGGCGCCCCCGATCACCGGAACCCCAATGC
778 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGGC-CCCCCGATCGTCGGAACCCCAATGC
*** * * * * *
14429640 CATTGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGACGAAGAGAAATACGACAC
841 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
** * * **
14429702 CAAAACATGCTCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTAGTCTGATCTTAGACTGGGA
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* *
14429767 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCATGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* ** * ** * *
14429832 TGTGGGTACTCAGTCGGCCAGAGGGGCGGGATGTTCAAGCCGGGGATCGATCGGGTCCCCCTCTA
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * ** *
14429897 CGTGCTGCCGATCTTGCTGCTGCAACCCTCAATCTGGTCTGATCTTAGACTGGGAATGAACTCCG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * *
14429962 TATGCCTAAGCCAACCGACG--A-AA-------CGAGC--GGGCGGGCACTACGCCAGCCAGAGA
261 TATGCCTAAGCCAACCGACGAAAGAACGGGCGGCGGGCGAGGGCGGGCACTACACCGGCCAGAGA
* ** * * *
14430015 GATGGGATGCAAAAGCCGTCGATCGATAGGGTGGTAGGTGGGATTAGGTACATCTTCATATTTCT
326 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*
14430080 ACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT-CCTTAAGCCTTCACGTGAAG
391 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * * ** ** *
14430144 TTTCAGGGCAAGACGACTCGCTTCCTATTTTTCAGGATTTTTGAAACTTTTTGTGGTTCGGGATT
456 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATT
* * *
14430209 TTTTAAAATTTTTTTGGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGT
521 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * ** *
14430274 TGGCATGCACAAAAATATTCAG-AAAAAACTAAAAGTGTACAAGATTTTGTGACTATTTGAAAAA
586 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
*
14430338 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTT
651 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14430403 TAAGGGGCTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
716 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* *
14430468 CACCCATCCCACATCATGAGCGCACACCCCCTGGTCCCCCCGATCGTCGGAACCCCAATGCCGCC
781 CACCCATCGCACATCATGTGCGCACACCCCCTGG-CCCCCCGATCGTCGGAACCCCAATGCCGCC
* * **
14430533 GGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCTGGTGAAGAAAAATGCAGGCAC
845 GGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC-GGCAC
* * * * *
14430592 CAACACAAGCCCGAG-CCAGGCATGTTCTGCCGCAACCTTCGGTCTGGTCTGATCTTAGACTGGG
1 CAGCACATGCCCGAGCCCA-GCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* * * *
14430656 AATGAACTTCGTATGCTTAGACTGGGAATGAACT-CGTATGCCAAAGTTAACCCACAAAACGAGC
65 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * *
14430720 GTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCACCCTCT
130 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT
* * * * * *
14430785 GCATGCTGTCGATCCTGCTACCGCAACCGTCAGTCGGGTCTGATCTTAGACTGGGAATGAACTCC
195 GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
*
14430850 GTATGCCTAAGCCAACCGACGAAATG-A------GCGGGC--GGGCGGGCACTACGCCGGCCAGA
260 GTATGCCTAAGCCAACCGACGAAA-GAACGGGCGGCGGGCGAGGGCGGGCACTACACCGGCCAGA
*
14430906 GAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
324 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * * *
14430971 CTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAAGGTCCCTTAAGCCTTCACATGA
389 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * * **
14431036 AGTTTCATGGTAAGACGACTCGTTTTTTATTTTTCACGATTTTTAAAACTTTTTGTGGTTC-AGG
454 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA-G
* * * *
14431100 ATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTCGGTAGACGTGATCGTTGTATTTT
518 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
14431165 TGTTGGCATGCACAAGAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAG
583 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
14431230 AAAAGTGTCCCGATTTTAGACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCT
648 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * * **
14431295 CTTTAAGGGGGTGTGAATTCTCGAGGTTTTGATGAGGCATAGGTGGCCAATATAAGGGTTAAGTA
713 CTTTAAGGGGGTGTGAGTTCTCGAGG-TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * *
14431360 CAAGCACCCATCGCACATCATGTGTGCACACCCCTTTCCCCGGCCCCCTCGATCGCCGAAACCCC
777 CCAGCACCCATCGCACATCATGTGCGCACA--CC---CCCTGGCCCCC-CGATCGTCGGAACCCC
* * * * *
14431425 AATGCCGCCGTTCAAGTTCTCCGACGATGCTCCGATGATGGTGCCCCGATGAAGAAAAATGCGGC
836 AATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
14431490 AC
901 AC
* * *
14431492 CAACACATGCCCGAGCCCAG-ATGTGCAGTCGCAACCCTCGGTCC-G---G-TC-----C---G-
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
**
14431542 AT---CT---TA-G----G-CTGGGAATGAACTCCGTATGCCTAAGTCAACTAACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * **
14431595 AGCGGGTGTTCAGCTGGCCA-AGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGTTACCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* ** * ** * *
14431659 CGTGCTGTCGATCCTGCTATCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGGACTCTG
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * **
14431724 TATGCCTAAGCCAACCGATGAAAAGAGCGGGCGGGCGGGC-A-GGCGGTG-ACTACGTCGGCCAG
261 TATGCCTAAGCCAACCGACG-AAAGAACGGGC-GGCGGGCGAGGGCGG-GCACTACACCGGCCAG
*
14431786 AGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
323 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
14431851 TCTGCATGCCAATACCATTTTTATGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCACGTG
388 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * * **
14431916 AATTTTCCTGGCAAGACGACTTGTTTTTTATTTTACACGATTTTTGAAACTTTTTACGGTTCGAG
453 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAG
* *
14431981 ATTTTTTAAAAATTTTTT-GTAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTT-T-TTC
518 ATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT-
* ** *
14432043 TTTTTTGGCATGCACAAAAAAATTTGGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG
581 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
14432108 AAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATG
646 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
14432173 CTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGC
711 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
14432238 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGGCCCCCCCGATCG-CTGGAACCTCGA
776 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGG-CCCCCCGATCGTC-GGAACCCCAA
* * *
14432302 TGCCGCCGGTCAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCAACGAAGAAAAATGCGGCAC
838 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * * * *
14432367 CAGCACATGCCTGAGCCCAGTATGTGCTGTCGTAACCCTCGATCTGATCTGATCTTAGACT--G-
1 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* *
14432429 --G------G-A-G---A-A-T--G-A--AACTCCGTATTCCTAAGTGAACCCACGAAACGAGCG
66 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * ** ** * * *
14432474 TACGGGCGCTCAGCCAGCCAGAGGGGTAGGATGTACAAGTCGGGGATCGGCCGGGTCACCCTCTG
131 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * *
14432539 CATGCTGCCGATCCTACTGCCACAACCCTCGGTCCAGTCCT-ATCTTAG-CTTGGGAATGAACTC
196 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGT-CTGATCTTAGAC-TGGGAATGAACTC
* * * **
14432602 CGTATGCCTAAGCCAA-CGACGAAATGAGTAGGAGGGCGAGCGGGCG-GCGTGGGCAC-ACGTCG
259 CGTATGCCTAAGCCAACCGACGAAA-GA--A--CGGGCG-GCGGGCGAGGGCGGGCACTACACCG
* * * *
14432664 ACCAGAGA-ACGGGATGCGTAAG-CATGGAATCGATAGGCTGAGTAAGGTGGGTTTAGGCACATC
318 GCCAGAGAGACGGGATGCGCAAGCCGTGG-ATCGATAGGGTG-GT-AGGTGGGTTTAGGCACATC
* * * *
14432727 TTCGTATTTTTTGCATTCCAATG-CATTTTTATGGCTTGTAAATTCATACGATGGTCCCTTAAG-
380 TTCATA-TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* *
14432790 CTTCACGTGAAG-TTCATGGCAAGA-GACTCGTTTTCCTATTTTTCACAATTTTCAAACCTTTTT
444 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT-CTATTTTTCACGATTTTCAAAACTTTTT
* *
14432853 ACGGTTCG-GAATTTTTAAAAATTTTTTCGGAAGGA-TTTTGCCCCCAAACTTGGTAGACGTGAT
508 ACGGTTCGAG-ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
*
14432916 CCTTGCATTTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
572 CCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* *
14432980 TGACCATTTGAAAAAAAGTGTCCCCATGTTCATAC-CATTAATGGCTA-T-GCAGCAAACCTGTA
636 TGACCATTTG-AAAAAAGTGTCCCCAT-TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* * * * *
14433042 AAATCTGAAATGCTCTTTAAGGGGGATGCGAGTTCTCAAAGGTTTGATAAGGGATAGAGGG-CAA
699 AAATCTCAAATGCTCTTTAAGGGGG-TGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAA
* *
14433106 TATAAGGGCCCAAGTACCAAGCAACCATCGCATATCAATGTGCGCACACCCCC
762 TATAAGGG-CCAAGTACC-AGCACCCATCGCACATC-ATGTGCGCACACCCCC
14433159 CGCGATTGCC
Statistics
Matches: 19743, Mismatches: 3874, Indels: 3387
0.73 0.14 0.13
Matches are distributed among these distances:
857 33 0.00
858 10 0.00
859 84 0.00
860 71 0.00
861 384 0.02
862 92 0.00
863 278 0.01
864 53 0.00
865 214 0.01
866 143 0.01
867 174 0.01
868 338 0.02
869 433 0.02
870 290 0.01
871 608 0.03
872 135 0.01
873 356 0.02
874 371 0.02
875 520 0.03
876 164 0.01
877 21 0.00
878 22 0.00
879 362 0.02
880 271 0.01
881 387 0.02
882 170 0.01
883 120 0.01
884 113 0.01
885 653 0.03
886 288 0.01
887 245 0.01
888 700 0.04
889 615 0.03
890 607 0.03
891 516 0.03
892 274 0.01
893 555 0.03
894 447 0.02
895 814 0.04
896 409 0.02
897 456 0.02
898 332 0.02
899 221 0.01
900 343 0.02
901 315 0.02
902 101 0.01
903 875 0.04
904 767 0.04
905 343 0.02
906 223 0.01
907 331 0.02
908 155 0.01
909 43 0.00
910 261 0.01
911 90 0.00
912 4 0.00
913 19 0.00
914 7 0.00
915 11 0.00
916 27 0.00
917 35 0.00
918 36 0.00
919 17 0.00
920 13 0.00
921 23 0.00
922 6 0.00
923 12 0.00
924 16 0.00
925 24 0.00
926 26 0.00
927 22 0.00
928 23 0.00
929 10 0.00
930 14 0.00
931 10 0.00
932 3 0.00
933 6 0.00
934 3 0.00
935 8 0.00
936 1 0.00
937 1 0.00
939 1 0.00
940 3 0.00
941 5 0.00
942 9 0.00
943 9 0.00
944 9 0.00
945 13 0.00
946 8 0.00
947 14 0.00
948 18 0.00
949 27 0.00
950 8 0.00
951 16 0.00
952 11 0.00
953 8 0.00
954 10 0.00
955 11 0.00
956 19 0.00
957 15 0.00
958 20 0.00
959 11 0.00
960 29 0.00
961 20 0.00
962 21 0.00
963 16 0.00
964 18 0.00
965 12 0.00
966 17 0.00
967 8 0.00
968 20 0.00
969 36 0.00
970 32 0.00
971 34 0.00
972 25 0.00
973 44 0.00
974 41 0.00
975 46 0.00
976 30 0.00
977 12 0.00
978 24 0.00
979 16 0.00
980 13 0.00
981 19 0.00
982 10 0.00
983 4 0.00
984 10 0.00
985 14 0.00
986 25 0.00
987 29 0.00
988 18 0.00
989 9 0.00
990 21 0.00
991 19 0.00
992 20 0.00
993 27 0.00
994 46 0.00
995 27 0.00
996 43 0.00
997 47 0.00
998 33 0.00
999 14 0.00
1000 16 0.00
1001 20 0.00
1002 60 0.00
1003 25 0.00
1004 10 0.00
1005 28 0.00
1006 23 0.00
1007 16 0.00
1008 13 0.00
1009 9 0.00
1010 7 0.00
1011 8 0.00
1012 9 0.00
1013 13 0.00
1014 14 0.00
1015 20 0.00
1016 19 0.00
1017 20 0.00
1018 24 0.00
1019 21 0.00
1020 47 0.00
1021 25 0.00
1022 26 0.00
1023 20 0.00
1024 306 0.02
1025 301 0.02
1026 340 0.02
1027 234 0.01
1028 189 0.01
1029 252 0.01
1030 459 0.02
1031 364 0.02
1032 300 0.02
1033 183 0.01
1034 194 0.01
1035 204 0.01
1036 316 0.02
1037 213 0.01
1038 236 0.01
1039 198 0.01
1040 186 0.01
1041 174 0.01
1042 171 0.01
1043 151 0.01
1044 203 0.01
1045 104 0.01
1046 92 0.00
1047 105 0.01
1048 99 0.01
1049 101 0.01
1050 112 0.01
1051 287 0.01
1052 455 0.02
1053 190 0.01
1054 557 0.03
1055 311 0.02
1056 558 0.03
1057 156 0.01
1058 103 0.01
1059 417 0.02
1060 269 0.01
1061 32 0.00
1062 24 0.00
1063 40 0.00
1064 46 0.00
1065 99 0.01
1066 38 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (902 bp):
CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
TATGCCTAAGCCAACCGACGAAAGAACGGGCGGCGGGCGAGGGCGGGCACTACACCGGCCAGAGA
GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATT
TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
CACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGCCG
GTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
Found at i:14410613 original size:26 final size:26
Alignment explanation
Indices: 14410584--14410636 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14410574 CCGATCCGAT
*
14410584 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14410610 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
14410636 C
1 C
14410637 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14413300 original size:26 final size:26
Alignment explanation
Indices: 14413264--14413319 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
14413254 CTGGTGCGAT
*
14413264 CTTAGATTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
*
14413290 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTACGTATG
14413316 CTTA
1 CTTA
14413320 TGTGAACCCA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.29, C:0.16, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:14413721 original size:19 final size:20
Alignment explanation
Indices: 14413693--14413733 Score: 75
Period size: 19 Copynumber: 2.1 Consensus size: 20
14413683 TCGTTTTCTA
14413693 TTTTTCACGATTTTCAAAAC
1 TTTTTCACGATTTTCAAAAC
14413713 TTTTT-ACGATTTTCAAAAC
1 TTTTTCACGATTTTCAAAAC
14413732 TT
1 TT
14413734 GGTAGACGTG
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
19 16 0.76
20 5 0.24
ACGTcount: A:0.29, C:0.17, G:0.05, T:0.49
Consensus pattern (20 bp):
TTTTTCACGATTTTCAAAAC
Found at i:14415066 original size:26 final size:26
Alignment explanation
Indices: 14415037--14415089 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14415027 CCGATCTGAT
14415037 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14415063 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14415089 C
1 C
14415090 CTAAGTCAAT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14415487 original size:903 final size:898
Alignment explanation
Indices: 14413728--14417743 Score: 5412
Period size: 904 Copynumber: 4.5 Consensus size: 898
14413718 ACGATTTTCA
* *
14413728 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCAAAAAACTCG
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
*
14413793 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTAGCCCCCA-TTCAGGACACTTTAATGGCTA
66 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT-GTCCCCATTTCA-GACACTTTAATGGCTA
* * *
14413857 GTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTATGAGTTCTTGAGGTTTGATGA
129 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGA
* *
14413922 GGTATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCTCACATCATGTGCGCACACCCCC
194 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCC
* * * * * * *
14413987 CCAGCCCCCTCGATCGCCGGAACCGCAATGCCGTCAGTCAGGTTCTCCGGCGATGCTCCGACGAT
259 CCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGAT
* * *
14414052 GGTACCCC-AGTGAAGAAAAATGTTGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAAC
323 GGTGCCCCGA-CGAAGAAAAATG--GCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAAC
* * * *
14414116 CCTCGGTCC-AGTCTGATCTTAGACTGGGAATTAACTCCGCATGCTTAGACTGGGAATGTACTCT
385 CCTTGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCT
* * * * *
14414180 GTATACCTAAGTCAACCAACGAAACGAGCGTGCGGGCACTCAACCGGCCAGAGGGGTGGGATGTG
449 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCG
* * * * ** *
14414245 TAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCAATCCTGCTCCTGCAACCCTC-AGTT
514 CAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTG-TGATCCTGCTCC-GCAACCCTCGA-TC
** *
14414309 CGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAGAACGAAAGGATGG
576 CGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-GAACGAGCGGACGG
* * * *
14414374 GCGGGCGAGCAGGCACTACACCAACCAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGG
640 GCGGGCGGGCAGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* *
14414439 TCA-GTGGGTTTAGGCACATCTTCATATTTTCTGCATGCCAATGCCATTTTTATGACTTGTAAAT
705 T-AGGTGGGTTTAGGTACATCTTCATA-TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
14414503 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
768 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * ** * *
14414568 CATGATTTTGGAAACTTTTTTTGGTTTGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGG-CC
833 CACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
14414632 C
898 C
* * *
14414633 AAAATCTGGTAGACGTGATCCTTGTATTTCTATTGGCATGCACAAAAAAATTCAGCTAAAAACTC
1 AAACT-TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
14414698 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
65 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
14414763 TAGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTCAAGGTTTGATGAG
130 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAG
* *
14414827 GGATACGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCAC
195 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCC-C
* ** ** * *
14414892 CCGGCCCCCCGATCGTCGAAACCCCAATGCTACCGGTCAGGTTCTTTGGCGATGCTCCGGCGATC
259 CCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATG
*
14414957 GTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAATCC
324 GTGCCCCGACGAAGAAAAATG--GCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
14415022 TTGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTA
387 TTGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTA
* * * *
14415087 TGCCTAAGTCAATCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAA
452 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAA
14415152 GCCGGGGATCGG-CGGGGTCCCCCTCTACGTGCTGCTGATCCTGCTACCGCAACCCTC-AGTCCG
517 GCCGGGGATCGGTC-GGGTCCCCCTCTACGTGCTG-TGATCCTGCT-CCGCAACCCTCGA-TCCG
** * * * *
14415215 GTCTGATCTTATACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGACAC-AGCGGGCGGGT
578 GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA-ACGAGCGGACGGGC
* * *
14415279 GGGAGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTA
642 GGGCGGGCAGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * * *
14415344 GGTGGGTTTAGGTACATCTTCATATTTTTGCGTGCCAAAGCCATTTTTATGGTTTGTAAATTCAT
707 GGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
*
14415409 ACAATGGTCCCTTAAGCCTTCACAGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTTTTCAC
772 ACAATGGTCCCTTAAGCCTTCAC-GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
* * * *
14415474 GATTTTTGAAACTTTTTACGATTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGACCCC
836 GATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
*
14415537 AAACTTGGTAGACGTGATCCTTGTATTTTGGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
*
14415602 AAGTGTACAAGATTTTGTGACCTTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
66 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
14415667 GGCAGCAAAGCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGT
131 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
*
14415732 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCATCTTCACAT--TGTGCGCACACCACCT
196 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-TCACATCATGTGCGCACACC-CCC
* * * * *
14415794 CC-GCCCTCCGATCGTCGGAACTCCAATTGCCGTCGGTCA-GTTCTCCGGTGATCCTACGGCGAT
259 CCGGCCCCCCGATCGTCGGAACCCCAA-TGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGAT
* * * * *
14415857 GATGCCCC-A-AAAGAAAAAT-GCACCAGCACATGCCCAAGCCCAGCATGTGATGTCTGAAACCC
323 GGTGCCCCGACGAAGAAAAATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC-GCAACCC
* * **
14415919 -TCGTCCGGTCTGATCTTAGACTTGGGAATGAACGTAAAAGTATGC----ACTAGGGAATGAA--
387 TTGGTCCGATCTGATCTTAGAC-TGGGAATGAAC-T--CCGTATGCTTAGACT-GGGAATGAACT
* * *
14415977 C-GT-TG-C-AAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGACCAGAGGGACGGGATG
447 CTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATG
* * * * *
14416038 CGCAAGCCGAGGATCGGTCGGGTACCCCTCTTCGTGCTGTCGATCCTTCTGCCACAACCCTCGAT
512 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGT-GATCCTGCT-CCGCAACCCTCGAT
* * * * * *
14416103 CTGGTCCAATCTTAGACTGGGAATGAACTCCGTATTCCTAGGCCAATCGATGAA--A-CGAACGG
575 CCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAACGAGCGGACGG
*
14416165 GCGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
640 GCGGGCGGGCAGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * *
14416230 TCGGTGGGTTTAGGTACGTCTTCATATTTCTGCACGCCAATGCCATTTTTATGGCTTGTAAATTC
705 TAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
14416295 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTAATGGCAAGACGACTCGTTTTCTATATTTC
770 ATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * *
14416360 ATGA-TTTTCAGAACTTTTTACGGTTC-AGGATTTTTAAAAATTTTTTCGGAAGGAGTTTTGGCC
834 ACGATTTTTGA-AACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
14416423 CC
897 CC
* * *
14416425 AAACTTGGTAGACATGATCCTTGTATTTTTGGTGGCATGCACAAAAAAATTCAGCTAAAAACGCG
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* * * *
14416490 AAGTGTACACGATTTTGTGACCATTTTAAAAATGTGT-CCCATTTCAAACACTTTAATGGCTACT
66 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * * *
14416554 GGCAGTAAACTTGTAAAATCTCAAGTGCTCTTTAAAGGGGTGTGAGATCTCGAGGTTTGATGAGG
131 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
*
14416619 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACA-CCCCCT
196 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCCC
***
14416683 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTGCAAACGATGG
261 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCT-CCGGCGATGG
* * * * * *
14416748 TGCCCCGACAAAGAAAAATGCGGCACTAGCACATGCCCAAGCCTAGCATGTGCTGCCGTAACCCT
325 TGCCCCGACGAAGAAAAAT--GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT
* * * * ** * *
14416813 CGGTCCGGTCCGATCTTAGATTGGGAATGAACTTTGTATGCCTAGACTGGGAATGAACTCCGTAT
388 TGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTAT
* * * * * ** *
14416878 GCCTAAGTCAACCCATGAAAGGAGTGTGCGGGCGCTCCGCCGGCCAGAGGGGTAGGATGTGCAAG
453 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * **
14416943 CCGCGGATCGGCCGGGTCCCCCTCTA----C-GTG---CTG--CCGCAACCCTCGATCTGGTCTG
518 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTGATCCTGCTCCGCAACCCTCGATCCGGTCCA
* * * *
14416998 ATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGTG
583 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AACGAGCGGACGGGCGGGCG
** * *** * * *
14417063 GGTGGGCACCACGTTGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTCGGTGG
647 GGCAGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
14417128 GTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGGTTGTAAATTCATACAAT
712 GTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
14417193 GGACCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTGGTTTTCTTTTTATTCACGATTT
777 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT-TTCACGATTT
* *
14417258 TTGAAACTTTTTACGGTTCGAGATTTTTTAAAAATGTTTT-GGAAGCTA-TTTTGGCCCC
841 TTGAAACTTTTTACGGTTCGAGATTTTTT-AAAATTTTTTCGGAAG-GAGTTTTGGCCCC
* *
14417316 AATCTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
1 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
*
14417381 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGACCCCATTTCAGACACTTTAATGGCTACT
66 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
14417446 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCGAGGTTTGATGAGT
131 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
14417511 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCA
196 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCCC
* * * * * *
14417576 GACCCCCCGATCG-CCGAAACCCAATGCCGCCGATCAGGTTCTCCGTTGATGCTCCGGCGGTGGT
261 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGT
* *
14417640 GCCCCGACGAAGAAAACGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTG
326 GCCCCGACGAAGAAAA-ATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTTG
* *
14417705 GTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
390 GTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGC
14417744 CTAAGTCAAC
Statistics
Matches: 2761, Mismatches: 289, Indels: 137
0.87 0.09 0.04
Matches are distributed among these distances:
887 209 0.08
888 368 0.13
889 22 0.01
890 113 0.04
891 466 0.17
892 198 0.07
893 46 0.02
894 55 0.02
895 3 0.00
896 57 0.02
897 27 0.01
898 2 0.00
899 82 0.03
900 7 0.00
901 46 0.02
902 83 0.03
903 336 0.12
904 474 0.17
905 72 0.03
906 95 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (898 bp):
AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGG
GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCCC
GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGT
GCCCCGACGAAGAAAAATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTTGG
TCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCC
TAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
GGGATCGGTCGGGTCCCCCTCTACGTGCTGTGATCCTGCTCCGCAACCCTCGATCCGGTCCAATC
TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAACGAGCGGACGGGCGGGCGGGCA
GGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
AGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
ACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
Found at i:14416865 original size:26 final size:26
Alignment explanation
Indices: 14416829--14416882 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
14416819 GGTCCGATCT
* **
14416829 TAGATTGGGAATGAACTTTGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
14416855 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
14416881 TA
1 TA
14416883 AGTCAACCCA
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCC
Found at i:14417357 original size:891 final size:890
Alignment explanation
Indices: 14401722--14417743 Score: 19290
Period size: 888 Copynumber: 18.0 Consensus size: 890
14401712 CCAGTCCGAT
* * * * * * *
14401722 CTTAAACTAGGAATGAACTACGTATGCCTATGTCAACCCACGAAACGAGCGGGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
14401787 CGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCCCTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCC-C----T---CT--A-CG
* * * * * * *
14401852 TGCTGCTGCAACCCTC-AGTCCGGTCCAATCTAAGACTAGGAATCAACTTCGTATGCCTAAGCCA
119 TGCTGCCGCAACCCTCGA-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * *
14401916 ACCGA-TAAA--A-----CGAGTGGGCGGGCGGGCACTATGTCGGCCAAAGAGGCGGGATGCGCA
183 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * **
14401973 AGTCGTGGATCGATAGGGTGGTAGGTGGGTTTTCA-GCACATCTTCATATTTCTGTGTGCCAATG
248 AGCCGTGGATCGATAGGGTGGTAGGTGGG-TTT-AGGTACATCTTCATATTTCTGCATGCCAATG
*
14402037 CCATTTTTATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
311 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * ** * * *
14402102 GGCAACTCGTTTTCTATTTTTTCACGATTTTCAAAACTTTTTGCGGTTCAAGATTTTGTAAAATT
376 GACGACTCGTTTTCTA-TTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATT
* * * *
14402167 TTTTCGGAAGGATTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGACATGCAC
440 TTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* *
14402232 AAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCA
505 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
14402297 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
570 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
14402362 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
635 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* ** *
14402427 ACATCATGTGAGCACACCTCCCCGGCACCCCCGATCGCCGGAACAACAATGCC-CTTGGTCAGGT
700 ACATCATGTGCGCACACC-CCCCGGC-CCCCCGATCGCCGGAACCCCAATGCCGC-CGGTCAGGT
* * * * * **
14402491 TCTCTGGCAATCCTCCGACGATGGAGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTTGAG
762 TCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* ** ** * *
14402556 CCCAGCATGTGCTGCCACAACCCTCGGTAAGGTCTAATCTTAGCCTGGGAATGAACTCCGGATG
827 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * **
14402620 CTTAGACTGGAAATAAACTCCGTATGCCCAAGTCAGCCCACGAAACGAGCGCACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** *
14402685 CTGCCAGAGGGGTGGGATACGTAAGTCATGGATCGGTCGGGTCCCCTTCTGCATGCTATCGAAGC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCC--C--C-T-CTA-CG-TGC
* ** ** * *
14402750 TGCTACTACAACCCTC-AGTCCAGTCTAATCTTAGACTGGGAATGAACTTCGTATGCCTAATCCA
122 TGC--C-GCAACCCTCGA-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
14402814 A-CAAAGAAATGA--------GCGGGCGGGCGGGCACTACGTCGGCCAGAAAGTCAGGATGTGCA
183 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * **
14402870 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTCTGTGTGCCAATGCC
248 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
* * *
14402935 AATTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAATTTCGTGGCAAGA
313 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * ** * *
14403000 CGACTCGTTTCCTATTTTTCATGATTTTCAAAAC-TTTTACGGTTTGAG-TTTTTTTAAATTTTT
378 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * * * * *
14403063 T-GGAAGGATTTTTGGCCCCAAACTTGATAGTCGTGAGCCTTGTATTTTTGTTGGTATGCACAAA
443 TCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
14403127 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATT
508 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
14403192 CAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
573 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14403257 GTTGTCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
638 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* **
14403322 TCATGTGCGCATACCCCCTCCGGCCCCCCCGATCATC-GAA-CCCAATGCCGCC-GTCAGGTTCT
703 TCATGTGCGCACA-CCCC-CCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * * * * *
14403384 CCGGTGATGTTCCGACGATGGTGCCTCGACGAAGAAAAATACGGCACCAGCACATGCCCGA-ACC
765 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * *
14403448 AGCATGTGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
830 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14403509 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
14403573 CGGCCA-AAGGGCGGGATGCACAAGGCAGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT--A--C-GT-G---C
* * * * * * *
14403637 TGCTCCCACAACCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAAC
122 TGC-CGCA-ACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * *
14403702 CGACGAAACGAGCAGGCGGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
185 CGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * *
14403767 CCGTGGATCAATA-GGTGGTAGGTGGGTTTAGGTACATCTTTATATTTCTACATGCCAATGCCAT
250 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCAT
***
14403831 TTTTATAAATTGTAAATTCATACAATGGTCCCTTAA-CTCTTCACGTGAAGTTTCATGGCAAGAC
315 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC-CTTCACGTGAAGTTTCATGGCAAGAC
** *
14403895 GACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC-AGGATTTTTTTAAATTTTT
379 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTT
** *
14403959 TCGGAAA-GAGTTTTGGCCCCAAACTTCTTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAA
443 TC-GAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
14404023 AAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
507 AAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
14404088 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAATGGGGG-G
571 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTG
* * *
14404152 TGAGTTCTCAAGGTTTGATGAGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCATCGA
635 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * * ** * *
14404217 AAATAATGTGTGCACACCCCCTGGCCCCCCCGACCATCGAAACCCCAATGCCGTCGGTCAGGTTC
700 ACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* * *
14404282 TCTGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
764 TCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * *
14404347 CAGCATATGCTGCTGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATG
829 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14404409 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAGATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * * *
14404474 CGACCAAAGGGGCGGGATGCACAAGTTGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGCCG-ATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGCAAC
* * * * ** * *
14404538 CTGCTGCCGCAACCCTTGTTCTGGTC-T-GATCTTAG-ATGAACTCCATACGCCTAAGCCAACCG
131 C--CT--CG--A-TC-TGGTCCGATCTTAGA-CTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * *
14404600 ACGAAAAGAGCGGGCGGGCGGGGGGGAGTGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCA
187 ACGAAACGAGCGGGCGGGC--GGGCG-G-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* ***
14404665 AGCCGTGGATCGATAGGGTGGTAGTTAAATTTAGGCT-CATCTTCATATTTCTGCATGCCAATGC
248 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG-TACATCTTCATATTTCTGCATGCCAATGC
* * *
14404729 CATTTTTATGGCTTGTGAAA-TCATACAATGTTCCCTTAAGCCTTCACATGAAGTTTCGTGGCAA
312 CATTTTTATGGCTTGT-AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
*** *
14404793 GACGACTCGTTTTCTATTTTTTTGGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
376 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTT
* * * * * * *
14404858 TTTCGGAAGGATTTTTGGACCCAATCTTGGTAGACATGATCCTTGTATTTTTTTTGTCATGCACA
441 TTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * ** * *
14404923 AAAAAATTCAACTAAAAAATTAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCAC
506 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14404988 TTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCATATGCTCTTTAAGGGGGTGT
571 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * ** * * * *
14405053 GACTTCTTGAGGTTTGATGAGCAATAGGGGGCCAATATAGGGGCCAAGTACCACCTCCCATTGCA
636 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * *
14405118 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCTATTGCCACCGGTCAGG---T
701 CATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
*
14405180 -------T-CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCC
765 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * *
14405237 AACATGTGCTGTCACAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCCTATG
830 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14405298 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14405363 TGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCAGGTCCCCCTCTACGTGCTGCTGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTAC--G-TGCTG--C-
* *
14405428 TGCTGCCACAACCCTCAGTTC-GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
125 --C-G---CAACCCTC-GATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** * *
14405492 ACCGATGAAACGA----GCGGACGGGCGGGCAGGCACTATACCGACAAGAGAGACGGGATGCGCA
183 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
14405553 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCC
248 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
*
14405618 ATTTTTATGGCTTGTAAAATCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
313 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * * *
14405683 TGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTT
378 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * * * **
14405748 TC-AGAATGAGTTTTGGCCCCAAACTTGATAGACGTGATCCTTGTATTTTTATTGGGACACACAA
443 TCGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
14405812 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCGTT
507 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
14405877 TCAGACACTTTAATTGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAGGGGGGTGTG
572 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
14405942 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCAC
637 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * ** * *****
14406007 ATCATCTGTGCACACCCGTCTGGGCCCCCCGATCGCTGGAACCCCAATATTATCGGTCAGGTTCT
702 ATCATGTGCGCACACCC--CCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
* ** * ** * * * *
14406072 CCGGGGATGCTCCGATGATGGTGCTCCGGTGGAGAAAAATGCGGTACCAACACATGCCCGAACCC
765 CCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * ** * * *
14406137 AGCATGTGCTGCCACAACCCTCAGTCCAATTCGATCTTAGACTGGGAATTAACTCTGTATG
830 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
14406198 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT--------T----
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** *
14406251 ----CAGAGGGGTGGGATGCGCAAGCAGGGGATCGACCGGGTCCCCCTCTGTGTGCTACCAATAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCC-C----T-CTA-C----G
* * * * * *
14406312 TGCTGCCGCAACCCTTGGTCCGGTCTGATCTTTGACTGGGAATGAACTCCGTATGCCAAAGCCAA
119 TGCTGCCGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14406377 CTGACGAAATGA------------GCGGGCGGGTACTACGCCGGCCAGAGACAAGGGATGCGTAA
184 CCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * * *
14406430 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCACATATCTACGTCCCAATGCCA
249 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCA
*
14406495 TTTTTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
314 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14406560 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTT
379 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
* * *
14406625 CAAAATGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
444 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
14406690 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
509 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14406755 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATACTCTTTAAGGGGGTGTGAG
574 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
14406820 TTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCAAAGTACCAACACCCAT--CACA-
639 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
** * * * * *
14406881 CA--T-C-C-C-CCTCAAC--CCCCCCGATTGTCGAAACCCTAATGCCGCCGATCAGGTTCTCCG
704 CATGTGCGCACACC-CCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
14406938 GCGATGCTCCGGCGATGGT-----G-C---------T-------CAGCACATGCCCGAGCCCAGC
768 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* *
14406981 ATGTGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATCAACTCCGTATG
833 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14407039 CTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCAAGAAATGAGCATACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** * *
14407104 CGGCTAGAGGGGCGGGATGCGCAAGTCAGCGATC-GACTGGGTCCCCCTCTGGGTGCCGTCGCAA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTACGTGCTGCCGCAA
* * * **
14407168 CCCTCGATCTGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATT
130 CCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* ** * * *
14407233 AGCGGGCGGGCGAGCGGGCGGGCACTACATCGGCCAAAAAGACGGGATGCGCAAGCTGTGGATCG
195 AGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * *** *
14407298 ATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTGTTATGGCT
260 ATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* * *
14407363 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGGCAACTCATTTTC
325 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
** * * * * *
14407428 TATTTTTCACGATTTTCAAAACTTTTTGCGGTTC-AGGATTTTGTAAAATGTTTTCGGAAGGATT
390 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGAAAGGAGT
*
14407492 TTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
454 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
14407557 AAAAACTCGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
519 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
14407622 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
584 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* *
14407687 TTGATGAGGGATAGGGGGCCAATATAAGGGACAAGTACCAGCACCCATCGCACATCACGTGCGCA
649 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * *
14407752 CACCCCTCCTGACCTCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCT
714 CACCCC-CC-GGCC-CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT
* * * *
14407817 CCGGCGATGGTGCCTCGACGAAGAAAAATGTGGTACCAGCACATGCCCGAGCCTAGCATGTGCTG
776 CCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * * * *
14407882 TCGCAACCCTTGGTCTGATTCGATCTTAGACTGGGAATGTACTCCGTATG
841 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14407932 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCTGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14407997 CGGCCAGAGGAGTGGGATGCGCAAGCCGGGGATTGGCCGGATCCCCCTCTACGTGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTA----C-G-TG---C
* * *
14408062 TGCTGCTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
122 TGC--C-GCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14408127 TCGACGAAACGAACGGGCGGACGGGCGGGCGGGCACTACACCGGCCAGAGAGACAGGATGCGCAA
184 CCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * * *
14408192 GTCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATGTCTGCGTGCCAATGCCT
249 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCA
* *
14408257 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAATTTCGTGGCAAGAC
314 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * ** *
14408322 GACTCGTTTCCTATTTTTCATGATTTTCAAAAC-TTTTACGGTTCGAGTTTTTTTAAAAATTTTT
379 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAAATTTTT
* * * *
14408386 T-GGAAGGAGTTTTGGCCCCAAACTTGATAGTCGTGAGCCTTGTATTTTTGTTGGCATGCACAAA
443 TCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
14408450 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
508 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
14408515 TAGACACTTTAATGGCCACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
573 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14408580 GTTCTCGAGGTTTGATGAGGGATTGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACA
638 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
14408645 TCATGTGCGCAC-CCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
703 TCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * ** *
14408709 GACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAG
767 GGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * *
14408774 GATGTGCTGCCCCAACCCTCAGTCCGGTCTGATCTTAGACCGGGAATGAACTCCGTATG
832 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14408833 CTTTGAGTGGGAATGAACT-CTTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * *
14408897 CGGCCA-AAGGGCGGGATACGCAAGCCGGGGATTCGACCGGGTCCCCCTCTGCGTGCTGCCG-AT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTCTACGTGCTGCCGCAA
* * *
14408960 CTTGCTGTCGCAACCCTTGTTCCAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 C---C-CTCG--A-TC-TGGTCC-G----ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * ** * * * * *
14409025 AACTGATGAAATAAGCGGGCAGGCGGGCGGATGGGCGGGCAGGCACTATGCTGGCCAAAGAGATG
182 AACCGACG--A-AA-C--G-A-GCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* * *
14409090 GGATGCGCAAGCCGTGGATCGA-AGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTTCTGCGT
239 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCAT
* *
14409154 GCTAATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
304 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * *
14409219 ATGGCAAGACGGCTCGTTTTCTATTTTTCACGATTTTTGAAACTATTTT-CGGTT-TAGGATATT
369 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT-TTTTACGGTTCGA-GATTTT
* * *
14409282 TTAAAATTTTTTCGGAAA-GTGTTTTGGCCACAAACTTGG-ACGACATGATCCTTGTATTTTTGT
432 TTAAAATTTTTTC-GAAAGGAGTTTTGGCCCCAAACTTGGTA-GACGTGATCCTTGTATTTTTGT
* * *
14409345 TGGCTATGCCCAAAAAAAATTCAGCTAAAAACTCAAAAG-GGACAAGATTTTGTGACCATTTGAA
495 TGGC-ATGCAC-AAAAAAATTCAGCTAAAAACTC-GAAGTGTACAAGATTTTGTGACCATTTGAA
* *
14409409 AAAATTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCT
557 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
14409474 CTTTGAGGGGGTGTGAGTTCTCGGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
622 CTTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
14409539 CCAGCACCCATCGCTCATCATGT--GCACACCCCCCAGG-CCCCCGATCGTCGGAACCCTCAATG
686 CCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCGATCGCCGGAACCC-CAATG
* * * * * *
14409601 CCACCGATCAGGTTCTCTGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGTGGCACCA
749 CCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
*
14409666 GCAAATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC-T----T----A-
814 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
14409721 G-A-T---T-TG
879 GAACTCCGTATG
* *
14409727 ----GA-----AA-GAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
14409782 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCAGGTCCCCCTCTGCGTGCTGCCGATCA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCG--CA
* ** ** * * *
14409847 GA-ACTCGGGGC-AATCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGAAGAA
129 -ACCCTC-GATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
14409910 ACGAGCAGGCGGACGAGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
192 ACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * * *
14409975 TTGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
257 TCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
14410040 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
322 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* ** * *
14410105 TTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGA
387 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGA
* * *
14410170 GTTTTGGCCCAAAACTTGGTGGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
452 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
*
14410235 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTT
517 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14410300 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCGGG
582 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
14410365 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
647 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
** * *
14410430 CACACCCCCTCGGCCCCCCGATCATCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCT
712 CACACCCCC-CGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT
* * *
14410495 CCGACGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAACCCAGCATGTGCTG
776 CCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
*
14410560 CCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
841 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14410610 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAA-CCACGAAACGAGCGTGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
14410674 CGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGAATCCCCTTTTGCGTGCTGCCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG-GTCCCC-----C-T-CT----A-C
* * * *
14410739 CTGCTGCCCCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
118 GTGCTGCCGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * * * *
14410804 ACCGATGAAACGAGCGGGCGAACAGGCGAGCGGCCACTACACCGGCCAGAGAGACAGGATGCGCA
183 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
*
14410869 AGCCGTGGATCGATAGGGTGGTAGGTGGATTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
248 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
* * * *
14410934 ATTTTTATGGCTTGTAAATTCATATAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCTTGGTAAGA
313 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
14410999 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTT
378 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * * * * *
14411064 TCAAAAGGAGTTTTGGCCCCAAACCTGGTAGACATGATCATTTTATTTTTGTTGGCATGCATAAA
443 TCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * *
14411129 AACATTCAGCTAAAAAATTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTC
508 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
14411194 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
573 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
14411259 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
638 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
14411324 TCATGTGCG--C-CCCCCC-GCCCCCCGATCACCAGAACCCCAATGCCGCCAGTCAGGTTCTCCA
703 TCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** *
14411385 GCGATGCTCCAGC-ATGGTGCCCCGGTGAAGAAAAATGCGTCACCAGCACATGCCCGAGCCCAGC
768 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * *
14411449 ATGTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCCTACG
833 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14411507 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCA-TAAGACGAGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA-ACGAGCGTGCGGGCGCTCAG
** * * * * *
14411571 CCTACCAGTGGGGCAGGATGCGCAAGCCAGGGATTCGGTTGGGTCCCCCTCTGCGTGCTGCCGCA
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA-TCGGTCGGGTCCCCCTCTACGTGCTGCCGCA
14411636 ACCCTC-AGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
129 ACCCTCGA-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * * *
14411700 CAAACGGGCGGGCGGGCGGGCGGGCACTACGCTGACCAAAGAGACGGGATGCGTAAGCCGTGGAT
193 CGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * * * * *
14411765 CGATAGGTTGGTAGCTGGGTTTAGGCACATCTTCATATTTGTACGTGCCAATGCCA-TTTTATGG
258 CGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* * ** *
14411829 CTTGTAAATTCATAGAATGGTCTCTTAAGCCTTCACAAGAAGTTTAATGGCAAGACGACTCGTTT
323 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
** * *
14411894 TCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTCTTCGAAAGGAG
388 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAG
* *
14411959 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAACTTCAGC
453 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
14412024 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCCTTTCAGACACTTT
518 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
14412089 AATGGCTACTGGCAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCAAGG
583 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
14412154 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
648 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* ** * *
14412219 ACACCCCCCGGCCCCCCAATCGCCGGAACCCCAATGCCATCGGTTAGGTTCTCCGACGATGCTCC
713 ACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCC
* **
14412284 AGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
778 GGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * *
14412349 GCAACCCTCGGTCTGATCCGATCTTTGACTGGGAATGAACTCCGCATG
843 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14412397 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCTGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
14412462 TGGCCAGAGGGGCAGGATGCGCAAG-CGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCT---G---C
* * * *
14412526 TGCTGCCACAACCCTTGGT-TCGGTCCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
125 --C-G---CAACCCTCGATCT-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** * *
14412590 ACCGACGAAATGA----GCGGGCGGGCAGGCAGGCACTACATCGGCCAGAGGGACGGGATGCGGA
183 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
14412651 AGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
248 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
*
14412716 ATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
313 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
14412781 CGACTTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTT
378 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * *
14412846 TCGGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTA-TTTTATTAGCATGCCACAA
443 TCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG-CACAA
* * *
14412909 AAAAATTTAGCTAAAAA-TCAAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGTGTCCCCATT
507 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
14412973 TCAGACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
572 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * * *
14413038 AGTTCTTGAGGTTTGGTGAGAGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCTCAC
637 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * *
14413103 ATCATGTGCGCACA-CCCCCGGCCCCTCCGATCGCCGG-ACCCTAATGCCGTCGATCCGGTTCTC
702 ATCATGTGCGCACACCCCCCGGCCCC-CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * ** *
14413166 CGACGATCCTCCAACGATGGTGCCCCAACGAAG-AAAATGCGGCACCAGCACATGCCCGAGCCCA
766 CGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * * *
14413230 GCATGTGCTGCTGCAACACTCGGTCTGGTGCGATCTTAGATTGGGAATGAACTACGTATG
831 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
14413290 CTTAGACTGGGAATGAACTCCGTATGCTTATGTGAACCCAAGAAACGAGCATGCTGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
14413355 CGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATTGATCGGGTCCCCTTCTGTGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC--C----T-CTA-CG----
* * * * * * *
14413420 TACTACCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGGATTCCTAAGCCAA
119 TGCTGCCGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14413485 CTGACGAAACGAACGGGCGGGTGGGAGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
184 CCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
14413550 GCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGTACATCTTTATGTTTTTGCATGCCAATGCCA
249 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCA
* * * * * *
14413615 TTTTTATGGCTTCTAAATTCATATC-GTGGTCCCTTAAGCTTTCATGTGAAGATTCATGGAAAGA
314 TTTTTATGGCTTGTAAATTCATA-CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
14413679 TGACTCGTTTTCTATTTTTCACGA-TTTTCAAA------A-----C-----TTTTT---A-----
378 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
*
14413719 -C-----GA-TTTT----CAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
443 TCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
14413773 AAAATTTAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTAGCCCCCA-T
508 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT-GTCCCCATT
* * *
14413837 TCAGGACACTTTAATGGCTAGTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTAT
572 TCA-GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
14413902 GAGTTCTTGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCTCA
636 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
14413967 CATCATGTGCGCACACCCCCCCAGCCCCCTCGATCGCCGGAACCGCAATGCCGTCAGTCAGGTTC
701 CATCATGTGCGCACA-CCCCCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * **
14414032 TCCGGCGATGCTCCGACGATGGTACCCC-AGTGAAGAAAAATGTTGCACCAGCACATGCCCGAGC
764 TCCGGCGATGCTCCGGCGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * * *
14414096 CCAGCATGTGCTGTCGTAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATTAACTCCGCATG
828 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14414159 CTTAGACTGGGAATGTACTCTGTATACCTAAGTCAACCAACGAAACGAGCGTGCGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14414224 CGGCCAGAGGGGTGGGATGTGTAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT--A--C-G----TGC
* *
14414289 TGCTCCTGCAACCCTCAGTTC-GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
122 TG--CC-GCAACCCTC-GATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** ** * * * **
14414353 ACCGAC-AGAACGAAAGGATGGGCGGGCGAGCAGGCACTACACCAACCAGAGAGACGGGATGCGC
183 ACCGACGA-AACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* *
14414417 AAGCCGTGGATTGATAGGGTGGTCA-GTGGGTTTAGGCACATCTTCATATTTTCTGCATGCCAAT
247 AAGCCGTGGATCGATAGGGTGGT-AGGTGGGTTTAGGTACATCTTCATA-TTTCTGCATGCCAAT
*
14414481 GCCATTTTTATGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
310 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * ** *
14414546 AGACGACTCGTTTTCTATTTTTCATGATTTTGGAAACTTTTTTTGGTTTGAGATTTTTTAAAATT
375 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATT
* * * * *
14414611 TTTTTGGAAGGAGTTTTGG-CCCAAAATCTGGTAGACGTGATCCTTGTATTTCTATTGGCATGCA
440 TTTTCGAAAGGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
14414675 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
504 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
14414740 ATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGT
569 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
14414804 GTGAGTTCTCAAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
634 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * **
14414869 CACATCATGTGCGCACACCCCACCCGGCCCCCCGATCGTCGAAACCCCAATGCTACCGGTCAGGT
699 CACATCATGTGCGCACA-CCC-CCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGT
** * *
14414934 TCTTTGGCGATGCTCCGGCGATCGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAG
762 TCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * * *
14414999 CCCAGCATGTGCTGTCGCAATCCTTGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATG
827 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14415063 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAATCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
*
14415128 CGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGG-CGGGGTCCCCCTCTACGTGCTGCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTA----C-G-TG---
* * * *
14415192 CTGCTACCGCAACCCTC-AGTCCGGTCTGATCTTATACTAGGAATGAACTCCGTATGCCTAAGCC
121 CTG---CCGCAACCCTCGA-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
14415256 AACCGACGACAC-AGCGGGCGGGTGGGAGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCAC
182 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * *
14415320 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTTTGCGTGCCAAAGC
247 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGC
*
14415385 CATTTTTATGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAGTGAAGTTTCATGGCAA
312 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-GTGAAGTTTCATGGCAA
* * *
14415450 GACGACCCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGGATTTTTTAAAATTT
376 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTT
* *
14415515 TTTCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTGGTTGGCATGCACA
441 TTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
*
14415580 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCTTTTGAAAAAAGTGTCCCCAT
506 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14415645 TTCAGACACTTTAATGGCTACTGGCAGCAAAGCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGT
571 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
14415710 GAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCATCTTC
636 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GC
* * * *
14415774 ACAT--TGTGCGCACACCACCTCC-GCCCTCCGATCGTCGGAACTCCAATTGCCGTCGGTCA-GT
700 ACATCATGTGCGCACACC-CC-CCGGCCCCCCGATCGCCGGAACCCCAA-TGCCGCCGGTCAGGT
* * * * * *
14415835 TCTCCGGTGATCCTACGGCGATGATGCCCC-A-AAAGAAAAAT---GCACCAGCACATGCCCAAG
762 TCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * * **
14415895 CCCAGCATGTGATGTCTGAAACCCTC-GTCCGGTCTGATCTTAGACTTGGGAATGAACGTAAAAG
827 CCCAGCATGTGCTG-CCGCAACCCTCGGTCCGGTCCGATCTTAGAC-TGGGAATGAAC-T--CCG
14415959 TATG
887 TATG
* *
14415963 C----ACTAGGGAATGAA---CGT-TG-C-AAGTCAACCCACGAAATGAGCGTGCGGGCACTCAG
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
14416018 CCGACCAGAGGGACGGGATGCGCAAGCCGAGGATCGGTCGGGTACCCCTCTTCGTGCTGTCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCC-C-TC-TAC-GT-G---
* * * *
14416083 CTTCTGCCACAACCCTCGATCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATTCCTAGGCCA
121 ---CTGCCGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
14416148 ATCGATGAAACGA----ACGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCA
183 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
14416209 AGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGTACGTCTTCATATTTCTGCACGCCAATGCC
248 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
*
14416274 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTAATGGCAAG
313 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAG
* * * *
14416339 ACGACTCGTTTTCTATATTTCATGA-TTTTCAGAACTTTTTACGGTTC-AGGATTTTTAAAAATT
377 ACGACTCGTTTTCTATTTTTCACGATTTTTGA-AACTTTTTACGGTTCGA-GATTTTTTAAAATT
* * *
14416402 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGGTGGCATGCAC
440 TTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * * *
14416467 AAAAAAATTCAGCTAAAAACGCGAAGTGTACACGATTTTGTGACCATTTTAAAAATGTGT-CCCA
505 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * * * *
14416531 TTTCAAACACTTTAATGGCTACTGGCAGTAAACTTGTAAAATCTCAAGTGCTCTTTAAAGGGGTG
570 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
14416596 TGAGATCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTC
635 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* *
14416661 ACATCATGTGCGCACACCCCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
700 ACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
* *** * * *
14416726 CCGGTGATGCTGCAAACGATGGTGCCCCGACAAAGAAAAATGCGGCACTAGCACATGCCCAAGCC
765 CCGGCGATGCT-CCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * **
14416791 TAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGATTGGGAATGAACTTTGTATG
829 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14416853 CCTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAGGAGTGTGCGGGCGCTCCGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * *
14416918 CGGCCAGAGGGGTAGGATGTGCAAGCCGCGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGCAAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGCAAC
* * *
14416983 CCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAACGA
131 CCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * ** * *
14417048 GCGGGCGGGCGGGTGGGTGGGCACCACGTTGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCAA
196 GCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
* *
14417113 TAGGGTGGTCGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGGTT
261 TAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
* * *
14417178 GTAAATTCATACAATGGACCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTGGTTTTCT
326 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * *
14417243 TTTTATTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAATGTTTT-GGAAGCTA-
391 ATTT-TTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAAATTTTTTCGAAAG-GAG
* *
14417306 TTTTGGCCCCAATCTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCACAAAAAAATTCAGC
453 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
14417371 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGACCCCATTTCAGACACTTT
518 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
14417436 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCGAGG
583 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
14417501 TTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
648 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * **
14417566 ACACCCCCCAGACCCCCCGATCGCC-GAAACCCAATGCCGCCGATCAGGTTCTCCGTTGATGCTC
713 ACACCCCCC-GGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC
* * *
14417630 CGGCGGTGGTGCCCCGACGAAG-AAAACGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
777 CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * *
14417694 CGCAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATG
842 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
14417743 C
1 C
14417744 CTAAGTCAAC
Statistics
Matches: 13163, Mismatches: 1493, Indels: 944
0.84 0.10 0.06
Matches are distributed among these distances:
841 118 0.01
845 66 0.01
848 1 0.00
849 1 0.00
850 2 0.00
851 1 0.00
855 1 0.00
856 5 0.00
857 446 0.03
858 32 0.00
860 4 0.00
861 2 0.00
862 2 0.00
863 98 0.01
864 53 0.00
865 208 0.02
866 141 0.01
867 220 0.02
868 281 0.02
869 311 0.02
870 101 0.01
871 63 0.00
872 6 0.00
873 5 0.00
875 72 0.01
876 420 0.03
877 3 0.00
878 2 0.00
879 2 0.00
880 4 0.00
881 6 0.00
882 4 0.00
883 6 0.00
884 98 0.01
885 450 0.03
886 246 0.02
887 270 0.02
888 892 0.07
889 379 0.03
890 368 0.03
891 470 0.04
892 549 0.04
893 438 0.03
894 362 0.03
895 302 0.02
896 424 0.03
897 437 0.03
898 653 0.05
899 187 0.01
900 661 0.05
901 483 0.04
902 144 0.01
903 879 0.07
904 734 0.06
905 349 0.03
906 99 0.01
907 151 0.01
908 106 0.01
909 36 0.00
910 242 0.02
911 67 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (890 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGCAAC
CCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
GCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
TAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTT
TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGC
GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:14418724 original size:12 final size:12
Alignment explanation
Indices: 14418707--14418737 Score: 62
Period size: 12 Copynumber: 2.6 Consensus size: 12
14418697 GAGGGATAGG
14418707 GGGCCAATATAA
1 GGGCCAATATAA
14418719 GGGCCAATATAA
1 GGGCCAATATAA
14418731 GGGCCAA
1 GGGCCAA
14418738 GCTCCAGCAC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 19 1.00
ACGTcount: A:0.39, C:0.19, G:0.29, T:0.13
Consensus pattern (12 bp):
GGGCCAATATAA
Found at i:14418950 original size:26 final size:26
Alignment explanation
Indices: 14418921--14418970 Score: 84
Period size: 26 Copynumber: 1.9 Consensus size: 26
14418911 CCAGTCCGAT
14418921 CTTAGACT-GGAAATGAACTCCGTAAG
1 CTTAGACTAGG-AATGAACTCCGTAAG
14418947 CTTAGACTAGGAATGAACTCCGTA
1 CTTAGACTAGGAATGAACTCCGTA
14418971 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
26 21 0.91
27 2 0.09
ACGTcount: A:0.34, C:0.20, G:0.22, T:0.24
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTAAG
Found at i:14419650 original size:26 final size:26
Alignment explanation
Indices: 14419614--14419663 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
14419604 GTCTGATCTG
14419614 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
14419640 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
14419664 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.20, G:0.28, T:0.24
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:14422113 original size:870 final size:869
Alignment explanation
Indices: 14420362--14433159 Score: 15226
Period size: 870 Copynumber: 14.6 Consensus size: 869
14420352 CATCATGTGC
* *
14420362 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGTGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
14420427 GGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * * *
14420492 CTTAAGCTTTCAAGTGAACTTTCATGGCAAGATGACTCATTTTCTATTTTTTCATGATTTTTGAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTTCACGATTTTTGAA
* * * * * *
14420557 ACTTTTTGCAGTTCGGGATTGTTAAAAATTTTTTCGGAAGGAATTTTGGCCCCACACTTGGTAGA
195 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * ** *
14420622 CGTGATCCTCGTATTTTTGTTGGCGTGCACAAAAAAATTCAGCGCAAAACTCGAAGTGTATAAGA
260 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * * *
14420687 TTTTGTTACCATTTGAAAAAAGTGTCCCCATTTTTAGACACTTTAGTGGCTACCGGCAGCAAACC
325 TTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* ** *
14420752 TGTAAAATCTCAAATGCTCTTTAATGGGGAATGAGTTTTCGAGGTTTGATGAGGGATAGGGGGCC
389 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * *
14420817 AATATAAGGGCTAGGTAACAGCACCCATCGCACATCATGTGCGCACACTCCAACCCCCCGGTCCC
454 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA---C--CCCCCCGGCCCC
*
14420882 CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTTCGGTGATGCTCCGACGATGGTGCCCC
514 CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCC
* * * * * ** *
14420947 TGGCGAAGAAAAATGCGGTACCAGCACAAGCCTGAGCCCAGCATGTGCTGCCATAACCCTTGGTC
579 -GACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * *
14421012 CGGTCCGATCATAGATTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGTACGG
643 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
** ** * * *
14421077 GCACTCAGTTGGCCAGAGAGGCGGGATGCGTAAGCCGAGGATCGGTCGGGTCCCCTCTGCATGCT
708 GTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTCTGCATGCT
* * *
14421142 ACCGATCCTGCT-CTCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGC
773 GCCGATCCTGCTGC-CGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * *
14421206 CTAAGCCAACCGACGAAACGAGCGGGCGTGAGG
837 CTAAGCCAACCGACGAAACGAACGGGCGGGCGG
* * * * * *
14421239 GCACTACGTCGGCCAGAGAGATGGGATGTGCAAGTCGTGGATCGATAGGGTGGTCGGTTGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
14421304 GGTACATCTTCACATTTTTTAGC-T-CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
66 GGCACATCTTCATA-TTTCT-GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
*
14421367 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGA
129 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
* * * * * *
14421432 AACTTTTTGCGGTTCGAGATTTTGTAAAATTTTTTTTGAAGGAGTTTTAGCCCCAAACTAGTTAG
194 AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAG
*
14421497 ACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
259 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
14421562 ATTTTGTGACCATTTGAAAAAAGTGACCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACC
324 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* *
14421627 TATAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCGAGGTTTGATGAGGGATAGGGGGCC
389 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
14421692 AATATAAGGGCCAAGTACCAGCACCCATCGCACATAATGTGCGCACACCCCCCCGGCCCCCCCGA
454 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGA
* * * **
14421757 TCGTCGGAACCTCAATGTCGTCGGTCAGGTT-TCCCGGTGATGCTCCGACGACGGTGCCCCGGTG
519 TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT-CCGGTGATGCTCCGACGATGGTGCCCCGACG
* * * * *
14421821 AAGAAAAATACGACACCAACACATGCCCTAGCTCAGCATGTGCTACCGCAACCCTCGGTCCGGTC
583 AAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
*
14421886 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCT
648 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCT
* * ** * * *
14421951 CAGCCGACCAGAGGGGCGGGATACGCAAGCCGGGGATCGACCGGGTGCCACTCTGCATGTTGCTG
713 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCTCTGCATGCTGCCG
* * * * * * *
14422016 ATGCTACTGCCGCAACCCTCAGTCCGATTTGGTCTTATACTGGGAATGAACTCCGTATGCCTAAG
777 ATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
14422081 CCAATCGACGAAACGAAAGGGCGGGCGG
842 CCAACCGACGAAACGAACGGGCGGGCGG
* * * *
14422109 GCACTACGCCAGCCAGATAGACGGGATGCGTAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
14422174 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
14422239 CTTAAGCCTTCACGTGAAGTTTCATGGCAATAAGACTCATTTTCTATTTTTCACGATTTTTGAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
** * * * * *
14422304 CTTTTTATGGTTTC-GGATTTTTTAAAATTTTTTCGAAAAGTGTCTTGGCCCCAAACTTGGTAGA
196 CTTTTTGCGG-TTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
14422368 CGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
260 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
14422433 TTTTGTGACCATTTGAAAAAAGTGACCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
325 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * *
14422498 GTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGACA
390 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* *
14422563 ATATAAGGGCCAAGTACCAGCACCCATCACACATAATGTGCGCACACCCCCCCGG-CCCCCCGAT
455 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGAT
* ** ** * * * * **
14422627 CGCCGTTACCCCAATGCCACCGGTCAGGTTCTCCGGTGATGCTCCGGCAACGGTGCCCTGGTGAA
520 CGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAA
** * * * * * *
14422692 GAAAAATATGGCACCAACACATGCCCTAGCCCAGCATGTGCTACCGTAACCCTCAGTTCAGTCCG
585 GAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
* * ** * * * * ** *
14422757 ATCTTAGACTAGGAATGAACTCCGTATG-CTTAG---A--CTGGGAATGAAC-TCCGTATGCCTA
650 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTG-CTC
*** * * * * ** ** ****
14422815 AGTCAACCCACGAAATGAGCGTACGACTGCTC-AGTAGGCCA--GAG--GGGT--AGGATGCATG
714 AG-CCGGCCA-G--AGGGGCG--GGA-TGCGCAAGCCGGGGATCG-GTCGGGTCCCCTCTGCATG
* * * * *
14422873 CTGCCGATCCTGCTGCTGCAACCCTCAGTCCGATCTGATATTAGACTGTGAATGAACTCCGTATG
771 CTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
*
14422938 CCAAAGCCAACCGACGAAACGAGCGACGGGCGGGCAGGCGG
836 CCTAAGCCAACCGACGAAACGA---ACGGGC--G--GGCGG
* * * *
14422979 GAACTACGCTGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
14423044 GGCATATCTTCATATTTCTG--TG----TGCCA-----ATGCCAT-T---TT--T---ATGG---
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
14423086 CTT--GCCTTCACGTGAACTTTCATGGCAAGACGACTCGCTTTCTATTTTTCATGATTTTTGAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
** * * *
14423149 CTTTTTATGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGAC
196 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
14423214 GTTGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGA
261 G-TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
14423279 TTTT-TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
325 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * *
14423343 ATAAAATATCAAATGCTCATTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
390 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
*
14423408 ATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA--CCCCC-GCCCCCCCGAT
455 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGAT
* *
14423470 CATCGGAACCCCAATGCC-TCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACAA
520 CGTCGGAACCCCAATGCCGT-CGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGA
* * ** *
14423534 AGAAAAATACGACACCAACACATGCCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCCGATCC
584 AGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-CG----
*
14423599 GATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAA
640 G-TC-----C--GG--T---C--CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * ** *
14423664 CCCACGAAACGAGTGTGCGGGTGCTCAGTCGGCCAGAGGCGCGGGATGTACAAGCCGGGGATCGA
688 CCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
* * * * * * **
14423729 TCGGGTCCCCCTCTGCGTGCTGTCGAACCTGTTGCCGTAACCCTCGGTCTGGTCCAATCTTAGAC
753 TCGGGT-CCCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGAC
*
14423794 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCG
817 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGC--G-G
* *
14423850 AGCACTGCGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
1 -GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
*
14423915 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATCCATACAATGGTC
65 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
*
14423980 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTCATGATTTTTTGA
130 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTTGA
* * *
14424044 AACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG-CCCAAACTTGGTAG
194 AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* *
14424108 ACGGGAATCTCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCT-AAAACTCGAAGTGTACA
259 ACGTG-ATC-CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
14424172 AGATTTTGTGACCA-TTGAAAAAAGTGTCCCCATTTCAGACACTTTATTGGCTACTGGCAGCAAA
322 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
14424236 CCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
387 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* ** * * * *
14424301 CCAATATAAGGGCCAAGTACCAGTACCCATCATACATCCTGTGCG-A-ACACCCCCGACCCCACC
452 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
* * * ** * *
14424364 GATCGTCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTTCGGTGATGGTGCCTCGAT
517 GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGAC
** * * *** * * * *
14424429 GAAGAAAAATATGGCACCAACACGTTCTTTAGCCCAACATGTGCTGTCGTAACCCTCAGTCCGGT
582 GAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* * * * * *
14424494 CCGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCAACAAAACGAGCATGCAGGTGC
647 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGC
** * * *
14424559 TCAGCCGGCCAGAGGGAAGGGATGCGCAAGTCAGGGATCGGTCGGGTCCCCCTCTGCATGCTTCC
712 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCTCTGCATGCTGCC
* * ** * * * * * *
14424624 AAGCCTGCTATCGTAACCCTCAGTCTGGTCTGATCGTCGACTGGGAATGAACTCTGTATGCCTAA
776 GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *
14424689 GCTAACCGATGAAACGAGTAGGCGGGCGGGCAG
841 GCCAACCGACGAAACGA--A--CGGGCGGGCGG
** *
14424722 GCACTACGTTGG-CAGGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGCGGTAGGTGGGTTT
1 GCACTACGCCGGCCA-GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * **
14424786 AGGCACTTCTTCATTTTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
65 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * * *
14424851 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAATTCATTTTTTATTTTTCACGATTTTTAAA
130 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
*
14424916 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATT-GTAG
195 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAAC-TTGGTAG
* *
14424980 ACGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAG
259 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
*
14425045 ATTTTGTGACCATTTGAAAAAAGGGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
324 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
14425110 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG-GGTTTGATGAGGGATAGGGGGCC
389 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
** * * *
14425174 AATATAAGGGCCAAGTTTCGGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCCCTGA
454 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGA
* * **
14425239 TCGCCGGAACCCCAATACTATCGGTCAGGTTCTCC------G----G-CGAT-G-G-CCCGACGA
519 TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGA
* *
14425290 AGAAAAATACGGCACCAACACATGCCCGAGGCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCT
584 AGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G---
* *
14425355 GATCTTAGACTGGGAATGAACTCTGTATACTTAGACTGGGATTGAACTCCGTATCCCTAAGTCAA
640 G-TC-----C--GG--T---C-C-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * *
14425420 CCCAGGAAACGAGCGTGCGGGTGCTCAACCGACCAGAGGGGTGGGATGTGCAAGCCGGGGATCGG
688 CCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
* * * * * ** *
14425485 TCGGGTCCCCTTTTGCGTGCTGCCGATCTTGTTGCTGCAACCCTCGGTCCGGTCCAATCTTAGAT
753 TCGGGTCCCC-TCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGAC
* *
14425550 TGGGAATGAACTCTGTATGCCTAAGCCAACTGACGAAACGAACGGGCGGACGGGCGGGCG
817 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAAC--G-GG-CGGGC--G-G
* * *
14425610 GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCTTGGATTGATAGGGTGGTAGGTGGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*** *
14425675 GGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTTTAAATTCATACAATGGTCC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* *
14425740 CTTAAGACC-TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCAATTTTTCATGATTTTTGAA
131 CTTAAG-CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
* * *
14425804 ACTTTTTACGGTTCAGGATTTTTTAAAAGTTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
195 ACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAG
*
14425869 ACGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
259 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
*
14425934 ATTTTGTGACCATTTGAAAAAAGTGTCCCCACTTT-AGACACTTTAATTGCTACTGGCAGCAAAC
324 ATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * * * *
14425998 CTATGAAATCTGAAATGCTCTTTAAGGGGGTGTGA-TTCTCAAGGTTTTATGAGGGCTAGGGGGC
388 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
*
14426062 CAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG--CCCCCG
453 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCG
* * * * * * *
14426124 ATCGCCGGAACCTCAATGCCGCCGGTCAGGTTCTCCGATGATGCCCCGACGATGGTGCCCTGACA
518 ATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACG
* * * * *
14426189 AAGAAAAATGTGACACCAACACATTCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAGTC
583 AAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
*
14426254 CGATCTTAGACTGGGAATGAACGCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCT
648 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCT
* * * * ***
14426319 CAGTCGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGGTCAGGTCACCCTCTTTGTGCTGCCG
713 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC-CCCTCTGCATGCTGCCG
* ** * * * *
14426384 ATCCTGCTACCTTAACCCTCGGTCCGGTCCGATCTTGGACTAGGAATGAACTCTGTATGCCTAAG
777 ATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
14426449 CCAACCGACGAAACGAACAAGCGG-GTGGACGGATGG
842 CCAACCGACGAAACGAAC--G-GGCG-GG-C----GG
* * *
14426485 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATAGATCGATAGGGTGGTAGGTGGGTTGA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
**
14426550 GGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
14426615 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * *
14426680 CTTTTTGCGGTTCGGGATTTTTTAATATTTTTTTGGAAGGAGTTTTGGCCCAAAACTTGGTAGAA
196 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * *
14426745 GTGATCCTTGTATTTTTGTTTG-ATGCATAAAAAAATTCATCTAAAAACTCGAAGTGTACAAGAT
261 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * * * * *
14426809 TTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTATTGCCTACTGGAAGCGAACCTC
326 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
14426874 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
391 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * *
14426939 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGTACACCCCTTTCCTCGACCCCCTC
456 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC---CC-CGGCCCCCCC
* * * * * * *
14427004 AATCGTCAGAACCCCAATACCGCCAGTCAGGTTCTCC---G--G---C-A--ACGGTGCCCTGAC
517 GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGAC
* * * * * * *
14427058 GAAGAAAAATGCGGCACTAACACATGCCCGAGCCCAGGATATGCTGCCACAACCCTCAGCCCGAT
582 GAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* *
14427123 CCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGC
647 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGC
* * * ** * * *
14427188 TCAGCCGGCCA-AGGGGCTGGATGCGTAAGCCAGGGATCGACCGAGTCACCCTCTACGTGCTGCC
712 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC-CCCTCTGCATGCTGCC
* * * * ** * *
14427252 AATCCTACTGCTGCAACCCTCGATCCGGTCCAATTTTAGACTGGGAATGAACTCTGTATGCCTAA
776 GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* **
14427317 GCCAACCGACGAAACGAGCTTGCGGGCGG
841 GCCAACCGACGAAACGAACGGGCGGGCGG
* * *
14427346 GCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGAATCAATAGGGTGGTAGGTGGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
14427411 GGCACATCTTCATATTTCTGCATGTCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
14427476 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
** * * * * *
14427541 CTTTTTATGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTTGCCCCAAACTTGGTAGAT
196 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * *
14427606 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAATATTCAGCTCAAAACTCAAAGTGTACAAGAT
261 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
14427671 TTTGTGACTATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG-AGCAAACCTG
326 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
14427735 TAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAA
391 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * * * *
14427800 TATAAGGGCCAAGTACCAGCATCCATCACACATCATGAGCGCACACCCCCCTGGGCCCCCCGTTC
456 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC
* ** * **
14427865 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGGTGATGGTGCCCTGGTGAAG
521 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAG
* *
14427930 AAAAATGTGGCACCAACACATGCCCGAGCCCAGCATGTCCTGCCGCAACCCTCGGTCTGGTCCAA
586 AAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC-GG-----
*
14427995 TCTTAGACTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
641 TC-----C--GG--T---C--CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* ** * * *
14428060 CACAAAACGAGTTTACGGGTGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGAGATCGGTC
690 CACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC
* * * * * ** * *
14428125 AGGTCCCCCTTTGCATGCTGTCGATCCTGCTACCGTAACCCTCGGTTTGGTCTGATCTCACACTG
755 GGGT-CCCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTG
* * * * * *
14428190 GGAATGAACTCTGTATGGCTAAGCCAACCGACAAAATGAGCGGGTGGGCGG
819 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGG
* *
14428241 GCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
14428306 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * ** **
14428371 CTTACGCCTTCACGTGAAGTTTCATGGTAAGACGACTCATTTTTTATTTTTCATAATTTTCAAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * * *
14428436 CTTTTTGTGGTTCGGGATTTTTTAAAATCTTTTCGGAAGGAGTTTTGGCCCAAAACTTGGTAGAT
196 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
14428501 GTGATCCTTGTATTTTTGTTGGCATGCACAAGAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
261 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * * *
14428566 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATAGCTACTGGCAGTAAACTTG
326 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
14428631 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAATTCTCGAGGTTTGATGAGGGATATGGGGCCAA
391 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * **
14428696 TATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGTGCACACCCATTTCCCCGGCCCCTTC
456 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC----CCCCGGCCCCCCC
* * * * *
14428761 GATCGTCGGAACCCCAATGCCGTCGTTCAAGTTCTCC-GCGATGCTCCGACGATGGTGCCCCAAT
517 GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGAC
* *
14428825 GAAGAAAAATGCGGCACCAACACACGCCCGAGCCCAGCATATGCTGCCGCAACCCTCGGTCCGGT
582 GAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* ** * *
14428890 CCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTAACGAAACAAGCGAGCGGGTGC
647 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGC
* * *
14428955 TCAACCGGCTA-AGGGGC-GGATGCGCAAGCCGGGGATCGGTCGGGTCACCCTCTGCATGCTGTC
712 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC-CCCTCTGCATGCTGCC
* * * * ** * *
14429018 AATCCTGCTACTGCAACCCTCGGTCCAGTCCAATCTTAGATTGGGAATGAACTCCATATGCCTAA
776 GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* *
14429083 GCCAACCGAAGAAAAGAGAGGGCGAGCGGGCGGGCGG
841 GCCAACCGACG---A-A-A---CGAACGGGCGGGCGG
* * *
14429120 GCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
14429185 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAATACAATGGTCC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
14429250 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* *
14429315 CTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG--TT----------TT-G--G-C
196 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
14429364 GTGATCCTCGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
261 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
14429429 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTA
326 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
14429494 TAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
391 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * *
14429559 TATAAGGGCCAAGTACCATCACCCATTGCACATCATGTGCGCACACCCCCCGGGCGCCCCCGATC
456 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC
** * * ** *
14429624 ACCGGAACCCCAATGCCATTGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGACGAAG
521 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAG
* * * * * *
14429689 AGAAATACGACACCAAAACATGCTCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTAGTCTGA
586 AAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC--G---G-
*
14429754 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACT
641 TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * ** *
14429819 CATGAAACGAGCGTGTGGGTACTCAGTCGGCCAGAGGGGCGGGATGTTCAAGCCGGGGATCGATC
690 CACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC
* * * * ** *
14429884 GGGTCCCCCTCTACGTGCTGCCGATCTTGCTGCTGCAACCCTCAATCTGGTCTGATCTTAGACTG
755 GGGT-CCCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTG
14429949 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-A---GCGGGCGG
819 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGG
* * ** * *
14429996 GCACTACGCCAGCCAGAGAGATGGGATGCAAAAGCCGTCGATCGATAGGGTGGTAGGTGGGATTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
14430061 GGTACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT-C
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * *
14430125 CTTAAGCCTTCACGTGAAGTTTCAGGGCAAGACGACTCGCTTCCTATTTTTCAGGATTTTTGAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* *
14430190 CTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTTGCCCCAAACTTGGTAGAC
196 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * * **
14430255 GTGATCCCTGTATTTTTGTTGGCATGCACAAAAATATTCAG-AAAAAACTAAAAGTGTACAAGAT
261 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* *
14430319 TTTGTGACTATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTG
326 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
14430384 TAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
391 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * *
14430449 TATAAGGGCCAAGTACCAGCACCCATCCCACATCATGAGCGCACA-CCCCCTGGTCCCCCCGATC
456 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC
* * * * **
14430513 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCTGGTGAAG
521 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAG
* *
14430578 AAAAATGCAGGCACCAACACAAGCCCGAG-CCAGGCATGTTCTGCCGCAACCTTCGGTCTGGTCT
586 AAAAATGC-GGCACCAACACATGCCCGAGCCCA-GCATGTGCTGCCGCAACC--C--TC--G---
* *
14430642 GATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACT-CGTATGCCAAAGTTAA
640 G-TC-----C--GG--T---C--CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* *
14430706 CCCACAAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
688 CCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
* * * * *
14430771 TCGGGTCACCCTCTGCATGCTGTCGATCCTGCTACCGCAACCGTCAGTCGGGTCTGATCTTAGAC
753 TCGGGTC-CCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGAC
* *
14430836 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGG
817 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCGG
*
14430889 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGGTTTA
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
14430954 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAAGGTCC
66 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * *
14431019 CTTAAGCCTTCACATGAAGTTTCATGGTAAGACGACTCGTTTTTTATTTTTCACGATTTTTAAAA
131 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * *
14431084 CTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTCGGTAGAC
196 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * *
14431149 GTGATCGTTGTATTTTTGTTGGCATGCACAAGAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
261 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * * *
14431214 TTTGTGACCATTTGAGAAAAGTGTCCCGATTTTAGACACTTTAATGGCTACTGCCAGCAAACCTG
326 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* * *
14431279 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAATTCTCGAGGTTTTGATGAGGCATAGGTGGCCA
391 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG-TTTGATGAGGGATAGGGGGCCA
** * * *
14431344 ATATAAGGGTTAAGTACAAGCACCCATCGCACATCATGTGTGCACACCCCTTTCCCCGGCCCCCT
455 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC---CCCCGGCCCCCC
* * * * * ** *
14431409 CGATCGCCGAAACCCCAATGCCGCCGTTCAAGTTCTCCGACGATGCTCCGATGATGGTGCCCCGA
516 CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGA
* * *
14431474 TGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAG-ATGTGCAGTCGCAACCCTCGGTCCGG
581 CGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* ** *
14431538 TCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGTCAACTAACGAAACGAGCGAGCGGGTG
646 TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTG
* * * * * * *
14431603 TTCAGCTGGCCA-AGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGTTACCCTCTGCGTGCTGT
711 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG-TCCCCTCTGCATGCTGC
** * ** * *
14431667 CGATCCTGCTATCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGGACTCTGTATGCCTA
775 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
14431732 AGCCAACCGATGAAAAGAGCGGGCGGGCGGGCAG
840 AGCCAACCGACGAAACGAACGGGCGGGC--G--G
* *
14431766 GCGGTGACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGG
1 GC----ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
14431831 TTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTAATACAATG
62 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * * *
14431896 GTCCCTTAAGCCTTCACGTGAATTTTCCTGGCAAGACGACTTGTTTTTTATTTTACACGATTTTT
127 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * *
14431961 GAAACTTTTTACGGTTCGAGATTTTTTAAAAATTTTTTGTAAGGAGTTTTGGCCCCAAACTTGGT
192 GAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
* * ** *
14432026 AGACATGATCCTT-T-TTCTTTTTTGGCATGCACAAAAAAATTTGGCTAAAAACTCAAAGTGTAC
257 AGACGTGATCCTTGTATT-TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* *
14432089 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGTAGCAA
321 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
14432154 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGG
386 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
14432219 GCCAATATAAGGGCCAAGCACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGGCCCCCC
451 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC
* * * * *
14432284 CGATCG-CTGGAACCTCGATGCCGCCGGTCAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCA
516 CGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCG
* * * * * * *
14432348 ACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGTATGTGCTGTCGTAACCCTCGATCTG
580 ACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
* * * * *
14432413 ATCTGATCTTAGACTGGGAGAATGAAACTCCGTATTCCTAAGTGAACCCACGAAACGAGCGTACG
645 GTCCGATCTTAGACT-GG-GAATG-AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * ** ** * *
14432478 GGCGCTCAGCCAGCCAGAGGGGTAGGATGTACAAGTCGGGGATCGGCCGGGTCACCCTCTGCATG
707 GGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC-CCCTCTGCATG
* * *
14432543 CTGCCGATCCTACTGCCACAACCCTCGGTCCAGTCCT-ATCTTAG-CTTGGGAATGAACTCCGTA
771 CTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGT-CTGATCTTAGAC-TGGGAATGAACTCCGTA
* * *
14432606 TGCCTAAGCCAACGACGAAATGAGTAGGAGGGCGAGCGGGCGGCGTGG
834 TGCCTAAGCCAAC--CG--ACGA--A--A---CGAACGGGCGG-GCGG
* * * * *
14432654 GCAC-ACGTCGACCAGAGA-ACGGGATGCGTAAG-CATGGAATCGATAGGCTGAGTAAGGTGGGT
1 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG-ATCGATAGGGTG-GT-AGGTGGGT
* * * *
14432716 TTAGGCACATCTTCGTATTTTTTGCATTCCAATG-CATTTTTATGGCTTGTAAATTCATACGATG
63 TTAGGCACATCTTCATA-TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
14432780 GTCCCTTAAG-CTTCACGTGAAG-TTCATGGCAAGA-GACTCGTTTTCCTATTTTTCAC-AATTT
127 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT-CTATTTTTCACGATTTT
* * * * * *
14432841 TCAAACCTTTTTACGGTTCGGAATTTTTAAAAATTTTTTCGGAAGGA-TTTTGCCCCCAAACTTG
191 TGAAA-CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
*
14432905 GTAGACGTGATCCTTGCATTTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGT
255 GTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* *
14432969 ACAAGATTTTGTGACCATTTGAAAAAAAGTGTCCCCATGTTCATAC-CATTAATGGCTA-T-GCA
319 ACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCAT-TTCAGACACTTTAATGGCTACTGGCA
* * * *
14433031 GCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGATGCGAGTTCTCAAAGGTTTGATAAGGGA
382 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG-TGTGAGTTCTC-GAGGTTTGATGAGGGA
* * *
14433096 TAGAGGG-CAATATAAGGGCCCAAGTACCAAGCAACCATCGCATATCAATGTGCGCACACCCCCC
445 TAGGGGGCCAATATAAGGG-CCAAGTACC-AGCACCCATCGCACATC-ATGTGCGCACACCCCCC
14433160 GCGATTGCCC
Statistics
Matches: 10348, Mismatches: 1214, Indels: 710
0.84 0.10 0.06
Matches are distributed among these distances:
842 1 0.00
843 109 0.01
844 5 0.00
845 274 0.03
846 63 0.01
847 4 0.00
848 1 0.00
850 4 0.00
852 1 0.00
853 2 0.00
855 2 0.00
857 37 0.00
858 4 0.00
859 91 0.01
860 72 0.01
861 383 0.04
862 98 0.01
863 323 0.03
864 13 0.00
865 5 0.00
866 14 0.00
867 12 0.00
868 73 0.01
869 463 0.04
870 883 0.09
871 591 0.06
872 217 0.02
873 384 0.04
874 368 0.04
875 656 0.06
876 325 0.03
877 164 0.02
878 26 0.00
879 348 0.03
880 255 0.02
881 372 0.04
882 154 0.01
883 106 0.01
884 105 0.01
885 207 0.02
886 100 0.01
887 12 0.00
888 323 0.03
889 508 0.05
890 271 0.03
891 49 0.00
892 8 0.00
893 130 0.01
894 224 0.02
895 598 0.06
896 387 0.04
897 238 0.02
898 7 0.00
899 84 0.01
900 113 0.01
901 81 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (869 bp):
GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC
GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAG
AAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGA
TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAG
CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTCTGCATGCTGCCGATCC
TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAACGGGCGGGCGG
Found at i:14422788 original size:26 final size:26
Alignment explanation
Indices: 14422759--14422811 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14422749 TCAGTCCGAT
14422759 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14422785 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14422811 C
1 C
14422812 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14423638 original size:26 final size:26
Alignment explanation
Indices: 14423602--14423654 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14423592 CCGATCCGAT
*
14423602 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14423628 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14423654 C
1 C
14423655 CTAAGTGAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14425387 original size:26 final size:26
Alignment explanation
Indices: 14425358--14425408 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14425348 CCGGTCTGAT
*
14425358 CTTAGACTGGGAATGAACTCTGTATA
1 CTTAGACTGGGAATGAACTCCGTATA
*
14425384 CTTAGACTGGGATTGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
14425409 CCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.18, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATA
Found at i:14428046 original size:26 final size:26
Alignment explanation
Indices: 14427996--14428048 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14427986 CTGGTCCAAT
**
14427996 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14428022 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14428048 C
1 C
14428049 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14429791 original size:26 final size:26
Alignment explanation
Indices: 14429755--14429807 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14429745 CTAGTCTGAT
14429755 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14429781 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14429807 C
1 C
14429808 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14430681 original size:26 final size:25
Alignment explanation
Indices: 14430645--14430696 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 25
14430635 CTGGTCTGAT
14430645 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAAC-TCGTATG
14430671 CTTAGACTGGGAATGAACTCGTATG
1 CTTAGACTGGGAATGAACTCGTATG
14430696 C
1 C
14430697 CAAAGTTAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 8 0.31
26 18 0.69
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (25 bp):
CTTAGACTGGGAATGAACTCGTATG
Found at i:14431089 original size:26 final size:27
Alignment explanation
Indices: 14431059--14431116 Score: 64
Period size: 27 Copynumber: 2.2 Consensus size: 27
14431049 GACGACTCGT
**
14431059 TTTTTATTTTTCACGA-TTTTTAAAAC
1 TTTTTATGGTTCACGATTTTTTAAAAC
* * *
14431085 TTTTTGTGGTTCAGGATTTTTTAAAAT
1 TTTTTATGGTTCACGATTTTTTAAAAC
14431112 TTTTT
1 TTTTT
14431117 TGAAAGGAGT
Statistics
Matches: 26, Mismatches: 5, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
26 12 0.46
27 14 0.54
ACGTcount: A:0.22, C:0.07, G:0.10, T:0.60
Consensus pattern (27 bp):
TTTTTATGGTTCACGATTTTTTAAAAC
Found at i:14438029 original size:909 final size:902
Alignment explanation
Indices: 14434985--14438420 Score: 4569
Period size: 909 Copynumber: 3.8 Consensus size: 902
14434975 CCGGTCCGAT
* * * * *
14434985 CTTAGACTGGGAATGAACACCGTATGCCTAAGTCAACCTACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGC
* * * * *
14435050 CGGCCAGAGGGGCGGGATGCGCAAGCCAAGGATCGGTCGGGTCTCCCTCTGTGTGCTG-CGGATC
66 CGGCCAGAGGGGCGGGATGAGCAAGCC-GGGATCGGCCGGGTCCCCCTCTGCGTGCTGTC-GATC
* * *** * * * * *
14435114 TTGCTGTTGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGCATACCCAAGCCA
129 CTACTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
14435179 ATCGACGAAACGAGAGGGGCGAGCGGGCGGGC--ACTACGTCGGCTAGAAAGACGAGATGCGTAA
194 ACCGACGAAACGAGAGGGGCGAGCGGGCGGGCAGACTACGTCGGCCAGAGAGACGAGATGCGCAA
* * *
14435242 GCAGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
259 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * *
14435307 TTTTTATGGCTTGGAAATTAATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCAAGAC
324 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *** **
14435372 GACTTGTTTTTTATTTTACGTGATTTTTGAAACTTTTT-CGGTTCGGGATTTTTTAAAATTTTTT
389 GACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * *
14435436 CGTAAGGAGTTTTGGTCCCAAACTTGGTAGACATGATCCTTTTATTTTTTTTGGCATGCACAAAA
454 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
*
14435501 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
519 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
14435566 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
584 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
** * *
14435631 TTCTTGAGGTTTGATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
649 TTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
** * ** * * * *
14435696 CATGTGCG-A-ACATCCCCCGGCCCCCCCGTTCTTCAGAACCCCAATGTCGTCGATCACGTTCTC
714 CATGTGCGCACACCCCCCCCGG-CCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* ** * * * * *
14435759 CGATGATGCTCCGGTGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCACGAGCCCA
778 CGGTGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCA
* * * * * * *
14435824 GCATGTGATGCCGTAACCCTCAGTCTGGTTTGATCTTAGATTGGGAATGAACTCTGTATG
843 GCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGAAATGAACTCCGTATG
* * *
14435884 CTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACT-AAACGAGCGTACGGGAGCTCTG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA-TGAAACGAGCGTACGGGCGCTCAG
* * * * *
14435948 CCGGCCAGAGGGGCGGGGTGCA-AAAGTCTGGTATCGGCCGGGTCCCCCTCTGTGTGCTGTCGAT
65 CCGGCCAGAGGGGCGGGATG-AGCAAG-CCGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * * * * *
14436012 CCTACTGCCGGAACCCTTGGTCCAGTCCGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCC
128 CCTACTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * *
14436077 AACCGACG--A--A-A---G-GAGCGGGCAAGC--ACTACGCCGGCCAGAGCGAC-AGATGCGCA
193 AACCGACGAAACGAGAGGGGCGAGCGGGCGGGCAGACTACGTCGGCCAGAGAGACGAGATGCGCA
* *
14436130 AGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACCTCTTCATATTTCTGCGTGCCAATGCC
258 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
* *
14436195 ATTTTTATGGCTTGTAAATTCGTACAATGGTCGCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
323 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * **
14436260 CGACTCATTTTCAATTTTTCACAATGTTCAAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTT
388 CGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
14436325 TCGAAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGACATGCACAAA
453 TCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC--A
* *
14436390 AAAAAAATCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
516 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
14436455 TTTAGACACTTTAATGGCTATTGGTAGCAAACCTGTAAAATCTCAAATGCTGC-TTAAGGGGGTG
581 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT-CTTTAAGGGGGTG
*
14436519 TGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATTGC
645 TGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
** *
14436584 ACATCATGTGCGCACA-CCCCCTGGGCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTT
710 ACATCATGTGCGCACACCCCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTT
* * * *
14436648 CTCCGGTGAT-CTCCGACAAT-GTG-CCTCGACGAAGAAAAAGGTGGCACAAGCACATGCCTGAG
775 CTCCGGTGATGCTCCGACGATGGTGCCCT-GACGAAGAAAAATGTGGCACCAGCACATGCCCGAG
* * *
14436710 CCCAGTATGTGCTACCAGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAAATGAAACTCCGTA
839 CCCAGCATGTGCTGCC-GCAACCCTCGGTCTGGTCTGATCTTAGACT-GGAAATG-AACTCCGTA
14436775 TG
901 TG
* *
14436777 CTTAGACTGGGAATGAACTCCGT-TTCCTAAGTCAAAACCATGAAACGAGCGTACGGGCGCTCA-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC-AACCCATGAAACGAGCGTACGGGCGCTCAG
* * * * *
14436840 ACGG-CAGAGGGGCGGGATGCGCAAGCCGGGATCGGTCGGGTCCCCCTCTACGTGCTGTAGATCC
65 CCGGCCAGAGGGGCGGGATGAGCAAGCCGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* *
14436904 TACTACCGCAACCCTCGGTCCGATCTGATCTTAG-CTTGGGAAAGAACTCCGTATGCCTAAGCCA
130 TACTACCGCAACCCTCGGTCCGGTCTGATCTTAGAC-TGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
14436968 ACCGACGAAATGAGCTGGAGGGCGAGCGGGCGGGC-GACCGCTACGTCGGCGAGAGAGACGGGAT
194 ACCGACGAAACGAG--AG-GGGCGAGCGGGCGGGCAGA---CTACGTCGGCCAGAGAGACGAGAT
* * * * *
14437032 GCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTTTGCATTCCA
253 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
*
14437097 ATGCCATTTTTATGGCTTGTAAATTCATACGATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
318 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* *
14437162 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAA
383 CAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAA
* * * *
14437227 TTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGCATTTTTTTTGGCATGC
448 TTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
* * *
14437292 ACAAAAAGATTCGGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCA
513 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
14437357 CATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGG
578 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* **
14437422 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCTTGTACCAGCACCCATC
643 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
14437487 GCACATAATGCGTGCACACCCCCCCCGGCCACCCCGATCACCGGAACCCCAATACCATCGGTCAG
708 GCACATCATGTGCGCACACCCCCCCCGGCC-CCCCGATCACCGGAACCCCAATGCCGTCGGTCAG
* *
14437552 GTTCTCCGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGTGGCACCAGCACATGCCCA
772 GTTCTCCGGTGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGTGGCACCAGCACATGCCCG
* * *
14437617 AGCCCAGCAAGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAAACTGGTAATGAACTCCGTAT
837 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGAAATGAACTCCGTAT
14437682 G
902 G
* * * *
14437683 CTTAGATTGGGAATTAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGC
* * * * *
14437748 CGGCCAGAGGGGTGGGATGATCAAGCCGGGGATTGGCCGGGTCCCCCTCTGCATGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGAGCAAGCC-GGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * *
14437813 TGCTACTGGAACCCTCGGTCTGGTCTGATCTTAGATTTGGAATGAACTCCGTATGCCTAAGCCAA
130 TACTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
14437878 CCGACGAAACGAGTAGGCGGGCG-GTTGGGCGGGCATGTACTACGTCGGCCAGAGAGACGAGATG
195 CCGACGAAACGAG-A-G-GGGCGAG-CGGGCGGGCA-G-ACTACGTCGGCCAGAGAGACGAGATG
* ** *
14437942 CGCAAGACGTGGATCGATAGGGTGGTACATGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAA
254 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
* *
14438007 TGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGCATGGC
319 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * *
14438072 AAGACAACTCGTTTTCTATTTTTCATAATTTTTC-AACCTTTTTACGGTTTGGGATTTTTTAAAA
384 AAGACGACTCGTTTTCTATTTTTCACAA-TTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAA
*** * * *
14438136 TTTTTTCGAAAGGAGTTTCAACCCCAAACTTCGTAGACGTAATCCTTGTATTTTTTTTGGAATGC
448 TTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
*
14438201 ACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
513 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * *
14438266 CATTTCAGACACATTAATGGGTACTGGCAGCAAACTTGTAAAATCTGAAATGCTCTTTAAGGGGG
578 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
14438331 TGTGAGTTCCCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTGCCAGCACCCATC
643 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATC
*
14438396 ACACATCATGTGCGCACACCCCCCC
708 GCACATCATGTGCGCACACCCCCCC
14438421 GAGGATGCCC
Statistics
Matches: 2214, Mismatches: 271, Indels: 94
0.86 0.11 0.04
Matches are distributed among these distances:
889 159 0.07
890 242 0.11
891 50 0.02
892 256 0.12
893 63 0.03
894 3 0.00
895 1 0.00
897 1 0.00
899 166 0.07
900 2 0.00
901 1 0.00
902 10 0.00
903 1 0.00
904 1 0.00
905 192 0.09
906 84 0.04
907 304 0.14
908 59 0.03
909 609 0.28
910 8 0.00
911 1 0.00
912 1 0.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (902 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGAGCAAGCCGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCT
ACTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACGAGAGGGGCGAGCGGGCGGGCAGACTACGTCGGCCAGAGAGACGAGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
AAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCACACCCCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGG
TGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCA
TGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGAAATGAACTCCGTATG
Found at i:14439174 original size:802 final size:807
Alignment explanation
Indices: 14437610--14439221 Score: 2308
Period size: 802 Copynumber: 2.0 Consensus size: 807
14437600 GCACCAGCAC
* * * *
14437610 ATGCCCAAGCCCAGCAAGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAAACTGGTAATGAAC
1 ATGCCCAAGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGGTCCGATCTTAAACTGGGAATGAAC
* * * * * *
14437675 TCCGTATGCTTAGATTGGGAATTAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGG
66 TCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAACGAGCATACAGG
* * * * *
14437740 CGCTCAGTCGGCCAGAGGGGTGGGATGATCAAGCCGGGGATTGGCCGGGTCCCCCTCTGCATGCT
131 CGCTCAGTCGGCCAGAGGGGCGAGATGAGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCATCCT
* * *
14437805 GTCGATCTTGCTACTGGAACCCTCGGTCTGGTCTGATCTTAGATTTGGAATGAACTCCGTATGCC
196 GTCGATCCTGCTACTGCAACCCTCGGTCTGGTCTGATCTTAGATCTGGAATGAACTCCGTATGCC
* * *
14437870 TAAGCCAACCGACGAAACGAGTAGGCGGGCGGTTGGGCGGGCATGTACTACGTCGGCCAGAGAGA
261 TAAGCCAACCGACGAAACGAG-A----GGC-G--GGACGGGCAAGCACTACGTCGGCCAGAGAGA
* **
14437935 CGAGATGCGCAAGACGTGGATCGATAGGGTGGTACATGGGTTTAGGCACATCTTCATATTTCTGT
318 CGAGATGCGCAAGACGTGAATCGATAGGGTGGTACATGGGTTTAGGCACATCTTCATATTTCTAC
*
14438000 GTGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
383 ATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * *
14438065 GCATGGCAAGACAACTCGTTTTCTATTTTTCATAATTTTTCAACCTTTTTACGGTTTGGGATTTT
448 GCATGGCAAGACAACTCATTTTCTATTTTTCATAATTTTTCAACATTTTTACGGTTCGGGATCTT
*
14438130 TTAAAATTTTTTCGAAAGGAGTTTCAACCCCAAACTTCGTAGACGTAATCCTTGTATTTTTTTTG
513 TTAAAATTTTTTCGAAAGGAGTTTCAACCCCAAACTTCGTAGACGTAATCCTTGTATTTTTGTTG
* * *
14438195 GAATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
578 GAATACACAAAAAAATTCAACTAAAAACTCAAAGTGTACAAGATTTTGTGAACATTTGAAAAAAG
* * *
14438260 TGTCCCCATTTCAGACACATTAATGGGTACTGGCAGCAAACTTGTAAAATCTGAAATGCTCTTTA
643 TCTCCCCATTTCAGACACATTAATGGGTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
*
14438325 AGGGGGTGTGAGTTCCCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTGCCAGCA
708 AGGGGGTGTGAGTTCCCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCA
14438390 CCCATCACACATCATGTGCGCACACCCCCCCGAGG
773 CCCATCACACATCATGTGCGCACACCCCCCCGAGG
* * * *
14438425 ATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
1 ATGCCCAAGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGGTCCGATCTTAAACTGGGAATGAAC
*
14438490 TCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAACGAGCATGCAGG
66 TCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAACGAGCATACAGG
* * **
14438555 CGCTCAGTCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTCCT
131 CGCTCAGTCGGCCAGAGGGGCGAGATGAGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCATCCT
* * * * *
14438620 GTCGATCCTGCT-GTCGCAACCTTTGGT-TCGGTCTGATTTTAGA-CTGAGAATGAACTCTGTAT
196 GTCGATCCTGCTACT-GCAACCCTCGGTCT-GGTCTGATCTTAGATCTG-GAATGAACTCCGTAT
* * *
14438682 GCCTAAGCCATCC-AGTGAAAC-A-A-GC-GGACGGGCAAGCACTACGTCGGCCAGAGAGACGGG
258 GCCTAAGCCAACCGA-CGAAACGAGAGGCGGGACGGGCAAGCACTACGTCGGCCAGAGAGACGAG
* * **
14438742 ATGCGCAAGCCGTGAATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGC
322 ATGCGCAAGACGTGAATCGATAGGGTGGTACATGGGTTTAGGCACATCTTCATATTTCTACATGC
* *
14438807 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
387 CAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGCAT
* * * **
14438872 GGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAA-ATTTTTGTGGTTCGGGATCTTTTAA
452 GGCAAGACAACTCATTTTCTATTTTTCATAATTTTTCAACATTTTTACGGTTCGGGATCTTTTAA
*** * * * *
14438936 AATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTATACGTGATCCTTGTATTTTTGTTGGCAT
517 AATTTTTTCGAAAGGAGTTTCAACCCCAAACTTCGTAGACGTAATCCTTGTATTTTTGTTGGAAT
*
14439001 ACACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTCTC
582 ACACAAAAAAATTCAACTAAAAACTCAAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTCTC
* *
14439066 CCCATTTCAGACACTTTAA-GGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
647 CCCATTTCAGACACATTAATGGG-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
14439130 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
711 GGGTGTGAGTTCCCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCC
** * *
14439195 ATGGCACATCATGTGTGCACACTCCCC
776 ATCACACATCATGTGCGCACACCCCCC
14439222 GACCCCCCCG
Statistics
Matches: 711, Mismatches: 81, Indels: 23
0.87 0.10 0.03
Matches are distributed among these distances:
801 3 0.00
802 278 0.39
803 186 0.26
807 2 0.00
812 1 0.00
814 6 0.01
815 235 0.33
ACGTcount: A:0.26, C:0.22, G:0.24, T:0.27
Consensus pattern (807 bp):
ATGCCCAAGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGGTCCGATCTTAAACTGGGAATGAAC
TCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAACGAGCATACAGG
CGCTCAGTCGGCCAGAGGGGCGAGATGAGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCATCCT
GTCGATCCTGCTACTGCAACCCTCGGTCTGGTCTGATCTTAGATCTGGAATGAACTCCGTATGCC
TAAGCCAACCGACGAAACGAGAGGCGGGACGGGCAAGCACTACGTCGGCCAGAGAGACGAGATGC
GCAAGACGTGAATCGATAGGGTGGTACATGGGTTTAGGCACATCTTCATATTTCTACATGCCAAT
GCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGCATGGCA
AGACAACTCATTTTCTATTTTTCATAATTTTTCAACATTTTTACGGTTCGGGATCTTTTAAAATT
TTTTCGAAAGGAGTTTCAACCCCAAACTTCGTAGACGTAATCCTTGTATTTTTGTTGGAATACAC
AAAAAAATTCAACTAAAAACTCAAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTCTCCCCA
TTTCAGACACATTAATGGGTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
TGAGTTCCCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCAC
ACATCATGTGCGCACACCCCCCCGAGG
Found at i:14440173 original size:871 final size:868
Alignment explanation
Indices: 14438482--14440262 Score: 2475
Period size: 871 Copynumber: 2.1 Consensus size: 868
14438472 CTTAGACTGG
* * * * *
14438482 GAATGAACTCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCATGAAACGAG
1 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAG
* *
14438547 CATGCAGGCGCTCAGTCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTC
66 CATGCAGGCGCTCAGTCGGCCAGAGGGGCGAGATGCGAAAGCCAGGGATCGGTCGGGTCCCCCTC
* * * * ** * *
14438612 TGTGTCCTGTCGATCCTGCTGTCGCAACCTTTGGTTCGGTCTGATTTTAGACTGAGAATGAACTC
131 TGCGTCCAGTCGATCCTGCTGTCACAACCCTCAGTTCGGTCCGATCTTAGACTGAGAATGAACTC
* * ** *
14438677 TGTATGCCTAAGCCATCCAGTGAAACAAGCGGACGGGCAAGCACTACGTCGGCCAGAGAGACGGG
196 TGCATGCCTAAGCCAACCAGAAAAACAAGCGGACGGGCAAGCACTACGCCGGCCAGAGAGACGGG
* **
14438742 ATGCGCAAGCCGTGAATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGC
261 ATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTCAGTTTAGGCACATCTTCATATTTCTACATGC
*
14438807 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
326 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGCAT
*
14438872 GGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAATTTTTGTGGTTCGGGATCTTTTAAA
391 GGCAAGACGACTCATTTTCTATTTTTCATAATTTTTGAAATTTTTGTGGTTCGGGATCTTTTAAA
* *
14438937 ATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTATACGTGATCCTTGTATTTTTGTTGGCATA
456 ATTTTTTCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATA
*
14439002 CACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTCTCC
521 CACAAAAAAATTCAACTAAAAACTCAAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTCTCC
* *
14439067 CCATTTCAGACACTTTAAGGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
586 CCATTTCAAACACTTTAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
14439132 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
651 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * *
14439197 GGCACATCATGTGTGCACACTCCCCGACCCCCCCGATCACCGGAACCCTAACGCCGCCGGTCAGG
716 GGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCACCAGAACCCTAACGCCGCCAGTCAGG
14439262 TTCTCCGACTATGCTCCGGCGACGGTGCCCTGGCGAAGAAAAATAC-GACACCAGCACATT-CCC
781 TTCTCCGACTATGCTCCGGCGACGGTGCCCTGGCGAAGAAAAATACAG-CACCAGCAC-TTGCCC
*
14439325 GAGCCCAGCATGTGCTGCCGCAACGCT-A
844 GAG-CC--C-TGTGCTGCCGCAACCCTCA
*
14439353 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAATGAG
1 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAG
* * * *
14439418 CGTGC-GGTCGCTCAG-CTGGCCAGAGGGGTGGGATGCGAAAGCCAGGGATCGGTCGGGTCCCCT
66 CATGCAGG-CGCTCAGTC-GGCCAGAGGGGCGAGATGCGAAAGCCAGGGATCGGTCGGGTCCCCC
* * * * *
14439481 TCTGCGTGCAGTCGATCTTGTTG-CTACAACCCTCAGTTTGGTCCGATCTTAGA-TGGGAATGAA
129 TCTGCGTCCAGTCGATCCTGCTGTC-ACAACCCTCAGTTCGGTCCGATCTTAGACTGAGAATGAA
* * * **
14439544 CTCTGCATGCCTAAGCCAA-CTGAAAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGA
193 CTCTGCATGCCTAAGCCAACCAG-AAAAACAAGCGGACGGGCAAGCACTACGCCGGCCAGAGAGA
* * **
14439608 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTCAGTTTAGGCACATCTTCATTTTTCTTT
257 CGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTCAGTTTAGGCACATCTTCATATTTCTAC
*
14439673 TTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT-CCTTAAAGCCTTCACGTGAAGT
322 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT-AAGCCTTCACGTGAAGT
* * *
14439737 TGCCTGGCAAGACGACTCATTTTCTATTTTTCATAATTTTTGAACCTTTTT-TCGGTTCGGGATT
386 TGCATGGCAAGACGACTCATTTTCTATTTTTCATAATTTTTGAA-ATTTTTGT-GGTTCGGGATC
* * * * *
14439801 TTTTAAAATTTTTTTGGAAGGCGTTTTGACCCCAAACTTGGTAGACGTGATCCTTTTATTTTTTT
449 TTTTAAAATTTTTTCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
14439866 TGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAA
514 TGGCATACACAAAAAAATTCAACTAAAAACTCAAAGTGTACAAGATTTTGTGAACATTTGAAAAA
* * * *
14439931 AGTGTTCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTT
579 AGTCTCCCCATTTCAAACACTTTAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* *
14439996 TAAGGGGGTGTGAGTTCTCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
644 TAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * ** * *
14440061 CACCCATTGCACATCATGTGCGCACACCCCCC-AGCTCTCCCGATCGTCAGAACCC-CACTGTCG
709 CACCCATGGCACATCATGTGCGCACACCCCCCGA-CCCCCCCGATCACCAGAACCCTAAC-GCCG
* * * * *
14440124 CCAGTCAGGTTCTCTG-GTGATGCTTCGGCGACGGTGGCCC-GGTGAAGAAAAATGCAGCACCAG
772 CCAGTCAGGTTCTCCGACT-ATGCTCCGGCGACGGT-GCCCTGGCGAAGAAAAATACAGCACCAG
* * *
14440187 CACTTGCCTGAGCCCTGTGCTGTCGCAACCCTCT
835 CACTTGCCCGAGCCCTGTGCTGCCGCAACCCTCA
*
14440221 G-TTCG-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCTTA
1 GAAT-GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTA
14440263 GACCGAGAAT
Statistics
Matches: 807, Mismatches: 88, Indels: 37
0.87 0.09 0.04
Matches are distributed among these distances:
864 30 0.04
865 2 0.00
866 4 0.00
867 17 0.02
868 3 0.00
869 6 0.01
870 230 0.29
871 510 0.63
872 5 0.01
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.27
Consensus pattern (868 bp):
GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAG
CATGCAGGCGCTCAGTCGGCCAGAGGGGCGAGATGCGAAAGCCAGGGATCGGTCGGGTCCCCCTC
TGCGTCCAGTCGATCCTGCTGTCACAACCCTCAGTTCGGTCCGATCTTAGACTGAGAATGAACTC
TGCATGCCTAAGCCAACCAGAAAAACAAGCGGACGGGCAAGCACTACGCCGGCCAGAGAGACGGG
ATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTCAGTTTAGGCACATCTTCATATTTCTACATGC
CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGCAT
GGCAAGACGACTCATTTTCTATTTTTCATAATTTTTGAAATTTTTGTGGTTCGGGATCTTTTAAA
ATTTTTTCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATA
CACAAAAAAATTCAACTAAAAACTCAAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTCTCC
CCATTTCAAACACTTTAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
GGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCACCAGAACCCTAACGCCGCCAGTCAGG
TTCTCCGACTATGCTCCGGCGACGGTGCCCTGGCGAAGAAAAATACAGCACCAGCACTTGCCCGA
GCCCTGTGCTGCCGCAACCCTCA
Found at i:14440262 original size:26 final size:26
Alignment explanation
Indices: 14440233--14440283 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14440223 TCGATCCGAT
* *
14440233 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACCGAGAATGAACTCCGTATG
14440259 CTTAGACCGAGAATGAACTCCGTAT
1 CTTAGACCGAGAATGAACTCCGTAT
14440284 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.22, G:0.24, T:0.25
Consensus pattern (26 bp):
CTTAGACCGAGAATGAACTCCGTATG
Found at i:14441978 original size:26 final size:26
Alignment explanation
Indices: 14441926--14441978 Score: 63
Period size: 26 Copynumber: 2.0 Consensus size: 26
14441916 CCTGTCCGAT
*
14441926 CTTAGACCAGGAATGAACTTCGTATG
1 CTTAGACCAGGAATGAACTTCGAATG
**
14441952 CTTAGACTGGGAATGAAC-TCTGAATG
1 CTTAGACCAGGAATGAACTTC-GAATG
14441978 C
1 C
14441979 CTATGTTAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
25 2 0.09
26 21 0.91
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACCAGGAATGAACTTCGAATG
Found at i:14442832 original size:26 final size:26
Alignment explanation
Indices: 14442803--14442855 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14442793 CCGGTCCGAT
*
14442803 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14442829 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14442855 C
1 C
14442856 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:14444598 original size:26 final size:26
Alignment explanation
Indices: 14444569--14444621 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14444559 CCGATCTAAT
*
14444569 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14444595 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14444621 C
1 C
14444622 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14445002 original size:878 final size:884
Alignment explanation
Indices: 14440487--14447095 Score: 7870
Period size: 908 Copynumber: 7.4 Consensus size: 884
14440477 GGCGGGCGGG
*
14440487 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* ** * *
14440552 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTT
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
* * *
14440617 GTGATTATTTACAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
131 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * *
14440682 TTTTGTTGGTATGCA-AAAAAGAATTCAGCTAAAAACTCAAAGTGTACAAGGTTTTGTGACCATT
196 TTTTGTTGGCATGCACAAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * *
14440746 TGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAACAAGCCTGTAAAATCTCAAA
260 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* * *
14440811 TGCTCTTTCAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAA
325 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
14440876 GTACCAGCACCCATAGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGA-CGGAACCCCA
390 GTACCAG---CC--A-CACA-CA-GTGCGCACACCCCCCGGCCCCCCCGATC-ACCGGAACCCCA
* * * * *
14440939 ATGCTGCCGGGCAGGTTCTCCGACGATGCTTCGGA-GATGGTGCCCTGACGAAGAAAAATGCGGC
446 ATGCCGCCGGTCAGGTTCTCCGGCGATGC-TCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
* *
14441003 ACCAGCACATGCCCGAGCCAAGCATGTGCTGCCGCAACCCTCGGTCC-G---G-TC-----C---
510 ACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGG
* * *
14441055 -----AA-T-C---T--TT-GACTGGGAATGAACTCCGTATGCCTGAGTCAACCCACGAAATGAG
575 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAG
* * * ** * * *
14441107 CGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGTAATCTGGGGATCGGTTGAGACCCCTTC
640 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTC
* * * * * * *
14441172 -GCGTGCTG-CTGATCCTACTCCCACAACCCTCAGTCCGATCTGATCTTAGACTAGGAATGAACT
705 TACGTGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACT
* * *
14441235 CCGTATGCCTATGCCATCCGACGAAACGAGCGGGCGGACGGGCACTACGTCGGCTAGAGAGACGG
769 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGA---GCACTACGTCGGCCAGAGAGACGG
* * * *
14441300 GATGCGCAAGCTGTGGATCGATAGGGCGGTTGGTGAGTTTAGGCACATCTTCAT
831 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
*
14441354 ATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* ** **
14441419 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGGTTTTTGAAACTTTTTGGGGTTC
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
* * *
14441484 GGGAGTTTTTTAAAATTTTTTTGGAAGGA-TTTTGGCCCCAAACATGGTAGATGTGATCCTTGTA
131 GGGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* *
14441548 TTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTTTACAAGATTTTGTGACCATT
195 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * * *
14441613 TGAAAAAAGTGTGCCCATTTCAAACACTTTAACGGCTACTGGCAGCAAACTTGTAAAATCTCAAA
260 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* *
14441678 TGCTCTTTAAGGGGGTGTGAGTTGTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
325 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * * *
14441743 GTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGACCCCGCTGATCATCGGAACCCCAA
390 GTACCAG----C--CACACA-CA-GTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAA
* * * * * **
14441808 TGACGCCAG-CTAGGTTCTCCGGCGATGCTCTGGCGATGATGCCCCGACGAAGAAAAAAACGGCA
447 TGCCGCCGGTC-AGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCA
* * * **
14441872 CCAGCACATGCCCGAGCCCAGCATGTGCTATCGCAACCCTCGGTCCTGTCCGATCTTAGACCAGG
511 CCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* * * * * *
14441937 AATGAACTTCGTATGCTTAGACTGGGAATGAACTCTGAATGCCTATGTTAACCCATGAAATGAGC
576 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGC
* * * ** * * *
14442002 GTGCGAGCACTCAGTCGATCGGAGGGGCAGGATGCGTAAGCCAGGGATCGGCCGGGTCCCCCTCT
641 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCT
** * * * *
14442067 ACGTGCTACCGATCCTGCTGTCACAA-CCTCGGTCCTGTCCAATCTTAGACT-GGAAATGAACTC
706 ACGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGG-AATGAACTC
*
14442130 CGTATGCCTAAGCCAACCGATGAAACGAGCGGGTGGGCGGGCGGACGGGCACTACGTCGGCCAGA
770 CGTATGCCTAAGCCAACCGACGAAACGA--------GCGGGCGGA---GCACTACGTCGGCCAGA
* ** * *
14442195 GAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGTCTTTAGGGACATCTACAT
824 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
*
14442256 ATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* *
14442321 GTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
* * *
14442386 GGG-TGTTTTTAAAATTCTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTA
131 GGGAT-TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* * *
14442450 GTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAATATTTTGTGACCATT
195 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * *
14442515 TGAAAAAAGTGTCCCCATTTTAGACACATTAATGGCTACTGGCAGCAAACCTGTGAAATCTCAAA
260 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
*
14442580 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAA
325 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * * * * *
14442645 GTGCCAGCAACCATCTCACATCATGTGCGCACACCCCCTGGCCCCCTCTATCATCGAAACCCCAA
390 GTACCAG---CCA---CACA-CA-GTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAA
* * *
14442710 TGCCGTCGGTCAGG---T-------T-CT-C--CGA---T--------GAAGAAAAATGTGGCAG
447 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * *
14442750 CAGCACATGCCCGAGCCCAGCATGTGTTGCCACAACCCTCTGTCCGGTCCGATCTTAGACTGGGA
512 CAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * *
14442815 ATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGAG
577 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCG
* * * * * * *
14442880 TGCGGGCGCTCAACCAGCCAAAGGGGCGGGATGCGTAAGCCGGGAATTGGTCAGGTCCCCCTCTA
642 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTA
* * * * * * * *
14442945 CGTGCCGTCGATCCTGTTGCTGCAACCCTCGATCCAGTCCAATCTAAGACTGGGAATGAACTCCG
707 CGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCG
* *
14443010 TATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGG-GCACTACGTCAGCC--AGAG-C----
772 TATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGAGCACTACGTCGGCCAGAGAGACGGGA
*
14443067 T-----A----TGGATCGTTAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
833 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* *
14443110 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCGC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * *
14443175 ATGAAGTTTCATGGCAAGACGACTCGTTTTATATTTTTCACGATTTTCAAAACTTTTTACGGTTT
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
* * ** *
14443240 GGCATTTTTTAAAATTTTTTTGGAAGGAGTTTTCACCCCAAACTTGGTAGACATGATCCTTGTAT
131 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
*
14443305 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA-AATTTGTGACCATTT
196 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * * *
14443369 GAAAAAAGTATCCCCATTACAGATACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAAT
261 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * *
14443434 GCTCTTTAAGGAGGTGTGAGTTCTCAAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
326 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * *
14443499 TACCAGCACCCATCACACATCATGTGCGCACACCCCCCGACTCCCCCGATCGCCAGAACCCCAAT
391 TACCAG----C--CACACA-CA-GTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAAT
** *
14443564 GCCGCCGGTCAGGTTCTCTAGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACC
448 GCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* * * * * * *
14443629 AGCACATGGCCGAGCCCAACATGTGCTATCGCAACCCTCAGTCCGGTCGGATCATAAACTGGGAA
513 AGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAA
* * * * *
14443694 TTAACTCCGTTTGCTTAGACTGGGAATGAACTCCATATGCATAAGTCAACCCATGAAACAAGCGT
578 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGT
* * ** * * *
14443759 GCGGGCGCTTAGCCGGCCAGAGGGTCGGGATGCACAAGCCGGGGATC-GCTCGAGTCCCCCTTTG
643 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGC-CGGGTCCCCCTCTA
* ** * * * *
14443823 CATGCTACCGATCCTGCTGCCGCAACCCTTGATTCGGTCCGATCTTAGACTAGGAATGAACTTCG
707 CGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCG
* * * *
14443888 CATGCCTAAGCCAACCGACGAAAGGAGCGGGCGGGCGGGCGGTCACTACGTTGGCCAGAGAGACG
772 TATGCCTAAGCCAACCGACG-AA--A-CGAGCGGGC-GG-AG-CACTACGTCGGCCAGAGAGACG
* *
14443953 GGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGCCACATCTTCAT
830 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * *
14444008 ATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCAC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
*
14444073 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTC
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
** * * *
14444138 AAGATTTTTTTAAATTTTTTCGGAAGGAGTTTTTGCCCCAAACTTGGTTA-ACGTGATCCTTGAA
131 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG-TAGACGTGATCCTTGTA
* * * * *
14444202 TTTTTATTGGCATGCACAAAAAAATTCACCTGAAAACTCAAAGTGTAGAAGATTTTGTGACCATT
195 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * * *
14444267 TGAAAAAAGCGTCCCCATTTCAGACGCTTTAATAGCTACTGGCAGCAAACCTATAAAATCTCAAA
260 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* *
14444332 TGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAA
325 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* *
14444397 GTACCAG-CAC-C-CA-T-CGCACACCCCCTCGGCCCCCCCGATCGCCGGAACCCTAATGCCGTC
390 GTACCAGCCACACACAGTGCGCACACCCCC-CGGCCCCCCCGATCACCGGAACCCCAATGCCG-C
* * * *
14444457 CGGTCAGGTTCTCCGGCGACGCTCCGGCGATGGTGGCCCGACGAAGAAAAGTGCGGCACCAGCAC
453 CGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * *
14444522 ATGCCCGAGCCCAGTATGTGCTACCGTAACCCTCGGTCCGATCTAATCTTAGACTGGTAATGAAC
518 ATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAAC
* *
14444587 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACT-AAACGAGTGTACGG
583 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA-TGAAACGAGCGTGCGG
* * * * * * *
14444651 GAGCTCAGCCGGCCAGAGGGGCGGGGTGCGAAAGTCTGGTATCGGCCGGGTCCCCCTCTATGTGC
647 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGC
* * *
14444716 TGTCGAT-CTGCTGCCACAACCCTCGGTCCAGTCCAATCTTAGACTAGGAATGAACTCCGTATGC
712 TGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGC
* *
14444780 CTAAGCCAACCGACGAAACTAGCGGGC-GAGCACTACGCCGGCCAGAGAGAC-GGATGCGCAAGC
777 CTAAGCCAACCGACGAAACGAGCGGGCGGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* *
14444843 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACCTTTTCAT
842 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * **
14444886 ATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCGTACAATGGTTGCTTAAGCCTTCAC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * *
14444951 GTGAAGTTTCATGGCAAGACGACTCCTTTTCAATTTTTCACGATGTTCAAAACTTTTTGCGGTTC
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
* *
14445016 GAGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTAT
131 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * * *
14445080 TTTTGTTGACATGCACAAAAAAAATCAGCTAAAAACTTGAAGTGAACAAGATTTTGTGACCATTT
196 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * *
14445145 GAAAAAAGTGTCTCCATTTTAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAAT
261 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* *
14445210 GCTGTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAG
326 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
** *
14445275 TACCAGCACCCATTGCACATCATGTGCGCACACCCCCCAGG-CCCCCCGATTGCCGGAACCCTAA
391 TACCAG---CCA---CACA-CA-GTGCGCACACCCCCC-GGCCCCCCCGATCACCGGAACCCCAA
* *
14445339 TGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACAATGGTGCCCCGACGAAGAAAAATGCGGCAC
447 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* *
14445404 CAGCACATGCCCGAGCCCAGTATGTGCTACCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGA
512 CAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
* * * *
14445469 ATGAACT-CGTATGCTTAGACTGGGAATGAACTCTGTTTTCCTAAGTCAACCCATGAAACTAGCG
577 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCG
* * * *
14445533 TGCGGGCGCTCAACCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTA
642 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTA
* * * * * * * * * *
14445598 TGTGCTGTAGATCCTACTACCGTAACCCTCAGTCTGGTCTGATCTTAG-CTTGGGAAGGAACTCC
707 CGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC-TAGGAATGAACTCC
* * *
14445662 GTATGCCTAAGCCAACCGACGAAACGAGCAGGAGGGCGAGCGGGCGGGCGGGCGTTACGTCGACC
771 GTATGCCTAAGCCAACCGACGAAACGAGC------G-G-GC--G-GAGC--AC--TACGTCGGCC
* * * *
14445727 AGAGAGACGGGATGCGTAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAAGCACATCTTTAT
821 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * **
14445791 ATTTCTGCATTCCAATGCCATTTTTATGGCTTGTAAATTCATATGATGGTCCCTTAAGCCTTCAC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* *
14445856 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACGTTTTACGGTTC
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
* *
14445921 GGGATTTTTTAAAATTTTTTCGCAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGCAT
131 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * * *
14445986 TTTTTTTGGCATGCACAAAAAGATTCGGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTC
196 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * *
14446051 GAAAAAAGTGACCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAAT
261 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * **
14446116 GCTCATTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGGCCTT
326 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT-AAGGGCCAA
* * *
14446181 GTACCAGCACCCATCGCACATCATGTGCGTACACCCCCCCGGCCACCCCGATCACCGAAACCCCA
390 GTACCAG---CCA---CACA-CA-GTGCGCACA-CCCCCCGGCCCCCCCGATCACCGGAACCCCA
* * *
14446246 ATACCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCA
446 ATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCA
* * * * * * *
14446311 CCAGTACATGCCCAAGCCCAACAAGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAAACTGGG
511 CCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* * * *
14446376 AATGAACTCCGTATGCTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGGAACGAGT
576 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGC
* * * *
14446441 GTACGGGCGCTCAGCCGGCCAGAGGGGTGGGATGAC-CAAGCCGGGGATCGACCGGGTCCCCCTC
641 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG-CGTAAGCCGGGGATCGGCCGGGTCCCCCTC
* * * * * * * * *
14446505 TGCATGCTGTCGATCTTGCTACCGGAACCCTCGGTCCGGTCTGACCTTAGATTGGGAATGAACTC
705 TACGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTC
*
14446570 CGTAT-CCTAAGCCAACCGACGAAACGAACAGGCGGGCGGTTGGGCGGGTGTGCACTACGTCGGC
770 CGTATGCCTAAGCCAACCGACGAAACG---A-----GC----GGGC--G-GAGCACTACGTCGGC
* * * * **
14446634 CAGAAAGACGGGATGCACAAGACGTGGGTCGATAGGGTGGTACATGGGTTTAGGCACATCTTCAT
820 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * * *
14446699 ATTTTTGTGTGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCAC
1 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * * * **
14446764 GTGAAGTTGCATGGCAAGACGACTCATTTTTTATTTTTCACAAATTTTC-AACCTTTTTATAGTT
66 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC-GATTTTCAAAACTTTTTACGGTT
* * *** * * * * *
14446828 TGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTCAACCCCAAACTTTGTAAATGTAACCCTTGTA
130 CGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* *
14446893 TTTTTTTTGGAATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
195 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * *
14446958 TGAAAAAAGTGTCCCCATTTCAGACACATTAATGGGTACTGGCAGCAAACCTGTAAAATCTGAAA
260 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
*
14447023 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAA
325 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
*
14447088 GTGCCAGC
390 GTACCAGC
14447096 ACCCATCACA
Statistics
Matches: 4966, Mismatches: 611, Indels: 293
0.85 0.10 0.05
Matches are distributed among these distances:
853 191 0.04
854 262 0.05
855 1 0.00
856 3 0.00
858 1 0.00
863 2 0.00
864 2 0.00
865 1 0.00
867 372 0.07
868 143 0.03
869 1 0.00
870 15 0.00
872 1 0.00
873 2 0.00
874 12 0.00
876 2 0.00
877 413 0.08
878 500 0.10
879 25 0.01
880 1 0.00
881 5 0.00
882 13 0.00
883 7 0.00
884 6 0.00
885 3 0.00
886 16 0.00
887 213 0.04
888 413 0.08
889 35 0.01
890 13 0.00
891 4 0.00
892 4 0.00
893 4 0.00
894 144 0.03
895 20 0.00
896 3 0.00
898 256 0.05
899 142 0.03
900 4 0.00
901 21 0.00
902 479 0.10
903 1 0.00
904 17 0.00
905 185 0.04
906 207 0.04
907 53 0.01
908 563 0.11
909 169 0.03
910 2 0.00
911 1 0.00
912 8 0.00
913 1 0.00
914 2 0.00
916 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (884 bp):
ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC
GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
TACCAGCCACACACAGTGCGCACACCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGG
TCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
CCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGC
TCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGTC
GATCCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAA
GCCAACCGACGAAACGAGCGGGCGGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
Found at i:14447908 original size:809 final size:812
Alignment explanation
Indices: 14446318--14447929 Score: 2212
Period size: 815 Copynumber: 2.0 Consensus size: 812
14446308 GCACCAGTAC
* * * *
14446318 ATGCCCAAGCCCAACAAGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAAACTGGGAATGAAC
1 ATGCCCAAGCCCAACAAGTGCTACCGCAACCCTCGATCCGGTCCGATCTTAAACTGGGAATGAAC
* * * * * *
14446383 TCCGTATGCTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGGAACGAGTGTACGGG
66 TCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
* * * *
14446448 CGCTCAGCCGGCCAGAGGGGTGGGATGACCAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCT
131 CGCTCAGCCGGCCAGAGGGGTGAGATGACCAAGCCAGGGATCGACCGAGTCCCCCTCTGCATCCT
* * * * *
14446513 GTCGATCTTGCTACCGGAACCCTCGGTCCGGTCTGACCTTAGATTGGGAATGAACTCCGTATCCT
196 GCCGATCCTGCTACCGCAACCCTCGGTCCGGTCTGACCTTAGACTGAGAATGAACTCCGTATCCT
** *** *
14446578 AAGCCAACCGACGAAACGAACAGGCGGGCGGTTGGGCGGGTGTGCACTACGTCGGCCAGAAAGAC
261 AAGCCAACCGACGAAACG-A-AGGCGGGCGGGCGGGCGGGCAAGCACTACGCCGGCCAGAAAGAC
* * * ***
14446643 GGGATGCACAAGACGTGGGTCGATAGGGTGGTACATGGGTTTAGGCACATCTTCATATTTTTGTG
324 GGGATGCACAAGACGTGGATCGATAGGGGGGTACATGGGTTTAGGCACATCTTCATATTTCTACA
* *
14446708 TGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTG
389 TGCCAATGCCATTTTAATAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTG
* * * *
14446773 CATGGCAAGACGACTCATTTTTTATTTTTCACAAATTTTCAACCTTTTTATAGTTTGGGATTTTT
454 CATGGCAAGACGACTCATTTTCTATTTTTCACAAATTTTCAA-CATTTTATAGTTCGGGATCTTT
* * *
14446838 TAAAATTTTTTCGAAAGGAGTTTCAACCCCAAACTTTGTAAATGTAACCCTTGTATTTTTTTTGG
518 TAAAATTTTTTCGAAAGGAGTTTCAACCCCAAACTTGGTAAACGTAACCCTTGTATTTTTATTGG
* * *
14446903 AATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
583 AATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTCAACATTTGAAAAAAGT
* * *
14446968 GTCCCCATTTCAGACACATTAATGGGTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAA
648 CTCCCCATTTCAGACACATTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
14447033 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTGCCAGCAC
713 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCAC
14447098 CCATCACACATCATGTGCGCACACCCCCCCCGACG
778 CCATCACACATCATGTGCGCACACCCCCCCCGACG
* * * * *
14447133 ATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAAC
1 ATGCCCAAGCCCAACAAGTGCTACCGCAACCCTCGATCCGGTCCGATCTTAAACTGGGAATGAAC
*
14447198 TCCATATGCTTAGACTGGGAATGAAATTTGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
66 TCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
* ** * *
14447263 CGCTCAGCCGGCCAGAGGGGTGAGATG-CGCAAGCCATGGATCGGTCGAGTGCCCCTCTGCGTCC
131 CGCTCAGCCGGCCAGAGGGGTGAGATGAC-CAAGCCAGGGATCGACCGAGTCCCCCTCTGCATCC
** ** **
14447327 TGCCGATCCTGCTGTCGCAA-CCTACGGTCCGGTCTGATTTTAGACTGAGAATGAACTTTGTATG
195 TGCCGATCCTGCTACCGCAACCCT-CGGTCCGGTCTGACCTTAGACTGAGAATGAACTCCGTAT-
* * *
14447391 CCTAAGCCATCC-AGTGAAACG-A-GCGGGCGGGCGGGCGGGCAAGCACTACGCCGGCCAGAGAG
258 CCTAAGCCAACCGA-CGAAACGAAGGCGGGCGGGCGGGCGGGCAAGCACTACGCCGGCCAGAAAG
* * * ** *
14447453 ACGGGATGCGCAAGCCGTGGATCGATTGGGGGGTAGGTGGGTTTAGGTACATCTTCATATTTCTA
322 ACGGGATGCACAAGACGTGGATCGATAGGGGGGTACATGGGTTTAGGCACATCTTCATATTTCTA
* *
14447518 CATGCCAATGCCATTTTTATATCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
387 CATGCCAATGCCATTTTAATAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * ** * * * *
14447583 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA-ATTTTGTGGTTCGGGATCTT
452 TGCATGGCAAGACGACTCATTTTCTATTTTTCACAAATTTTCAACATTTTATAGTTCGGGATCTT
*** * * *
14447647 TTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTATACGTGATCCTTGTATTTTTATTG
517 TTAAAATTTTTTCGAAAGGAGTTTCAACCCCAAACTTGGTAAACGTAACCCTTGTATTTTTATTG
* *
14447712 GCATGCGC-AAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTCAACATTTGAAAAAAG
582 GAATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTCAACATTTGAAAAAAG
* * *
14447776 TCTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTA
647 TCTCCCCATTTCAGACACATTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
14447841 AGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCA
712 AGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCA
** *
14447906 CCCATTGCACATCATGTGTGCACA
777 CCCATCACACATCATGTGCGCACA
14447930 TTCCCCGACC
Statistics
Matches: 693, Mismatches: 100, Indels: 14
0.86 0.12 0.02
Matches are distributed among these distances:
809 194 0.28
810 77 0.11
812 184 0.27
813 1 0.00
814 4 0.01
815 216 0.31
816 17 0.02
ACGTcount: A:0.26, C:0.22, G:0.25, T:0.27
Consensus pattern (812 bp):
ATGCCCAAGCCCAACAAGTGCTACCGCAACCCTCGATCCGGTCCGATCTTAAACTGGGAATGAAC
TCCATATGCTTAGACTGGGAATGAAATCTGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
CGCTCAGCCGGCCAGAGGGGTGAGATGACCAAGCCAGGGATCGACCGAGTCCCCCTCTGCATCCT
GCCGATCCTGCTACCGCAACCCTCGGTCCGGTCTGACCTTAGACTGAGAATGAACTCCGTATCCT
AAGCCAACCGACGAAACGAAGGCGGGCGGGCGGGCGGGCAAGCACTACGCCGGCCAGAAAGACGG
GATGCACAAGACGTGGATCGATAGGGGGGTACATGGGTTTAGGCACATCTTCATATTTCTACATG
CCAATGCCATTTTAATAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGCA
TGGCAAGACGACTCATTTTCTATTTTTCACAAATTTTCAACATTTTATAGTTCGGGATCTTTTAA
AATTTTTTCGAAAGGAGTTTCAACCCCAAACTTGGTAAACGTAACCCTTGTATTTTTATTGGAAT
GCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTCAACATTTGAAAAAAGTCTC
CCCATTTCAGACACATTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
GGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCA
TCACACATCATGTGCGCACACCCCCCCCGACG
Found at i:14448975 original size:26 final size:26
Alignment explanation
Indices: 14448946--14448996 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
14448936 TCGATCCGAT
14448946 CTTAGACT-AGGAATGAACTCCGTATG
1 CTTAGACTGA-GAATGAACTCCGTATG
14448972 CTTAGACTGAGAATGAACTCCGTAT
1 CTTAGACTGAGAATGAACTCCGTAT
14448997 ACCTAAGTTA
Statistics
Matches: 24, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.31, C:0.20, G:0.22, T:0.27
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:14449930 original size:26 final size:26
Alignment explanation
Indices: 14449894--14449943 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
14449884 GGTCCGATCA
14449894 TAGACTGGGAATGAACTCAGTATGTT
1 TAGACTGGGAATGAACTCAGTATGTT
*
14449920 TAGACTGGGAATGAACTCCGTATG
1 TAGACTGGGAATGAACTCAGTATG
14449944 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.14, G:0.28, T:0.28
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCAGTATGTT
Found at i:14450540 original size:948 final size:941
Alignment explanation
Indices: 14448713--14450602 Score: 2781
Period size: 948 Copynumber: 2.0 Consensus size: 941
14448703 GCTCTTTAAG
* *
14448713 GGGGTGTGAGTTCTCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
1 GGGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * * *
14448778 CATCGCACATCATGTGCGCACACCCCCCAGCTCCCCCGATTGTCAGAACCCCACTGTCGCCAATC
66 CATCGCACACCATGTGCGCACACCCCCCAGCTCCCCCGATCGCCAAAACCCCAATGCCGCCAATC
* * * * * *
14448843 AGGTTCTCCGGTGATGCTTCGGCGACGGTGGCTCGATGAAGAAAAATACGGCACCAGCACATGCC
131 AGGTTCTCCGGCGATGCTCCGACGACGGTGCCCCGATGAAGAAAAATACGGCACCACCACATGCC
* * * * * *
14448908 TGAGCCCTGTGCTGTCGCAACCCTCTGTTCGATCCGATCTTAGACTAGGAATGAACTCCGTATGC
196 TGAGCCCTGTGCTCTCGCAACACTCGGTCCGATCCGATCATAGACTAGGAATGAACTCAGTATGC
* * * *
14448973 TTAGACTGAGAATGAACTCCGTATACCTAAGTTAACCCACGAAACAAGCGTGTGGGTGCTCAGCC
261 TTAGACTGAGAATGAACTCCGTATACCTAAGTCAACCCACGAAACAAGCGTGCGAGCGCTCAGCC
** * * *
14449038 GGCCAGAGGGGCGAGATACGTAAACCGGGGATCAATCGGGTCCCCCTCTGCGTGTTGCCTATCCT
326 GGCCAGAGGGGCGAGATACACAAACCGGGGATCAATCGGGTCCCCCTCTGCGTGCTACCAATCCT
* * * *
14449103 GCTGCCACAACCCTCGATCCAGGTCTGATCTTAGACTGGCAATGAACTCCGTATGCCTAAGCCAA
391 GCTACCACAACCCTCGATCCAGATCCGATCTTAGACTGGCAATGAACTCCGCATGCCTAAGCCAA
* *
14449168 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGTAAGCCG
456 CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGTCGACCAGAGAGACAGGATGCGCAAGCCG
*
14449233 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
521 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTT
*
14449298 TATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
586 TATGGCTTCTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* ** * * * * **
14449363 CGTTTTCTATTGTTCATGATTTTTGAAACTTTTTGCGGTTCGTGATTATTTACAATTTTTTCGGA
651 CGTTTTCTATTGTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTATTTAAAAAATTTTC-GA
* *
14449428 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAGGCATAAAAAAAT
715 AGGAGTTTTGGCCCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCAGGCACAAAAAAAT
*
14449493 TCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
780 TCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGAC
*
14449558 ACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCT
845 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCT
*
14449623 CGAGGTTTGATGAGCGATAGGGGGCCAATATA
910 CGAGGCTTGATGAGCGATAGGGGGCCAATATA
14449655 GGGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGG-CATATATAAGGGCCAAGTACCAGCAC
1 GGGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGGCCA-ATATAAGGGCCAAGTACCAGCAC
* *
14449719 CCATCGCACACCATGTGCGCATACCCCCC-GACTCCCCCGATCGCCAAAACCCCAATGCCGCCGA
65 CCATCGCACACCATGTGCGCACACCCCCCAG-CTCCCCCGATCGCCAAAACCCCAATGCCGCCAA
* * *
14449783 TTAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCACCACATG
129 TCAGGTTCTCCGGCGATGCTCCGACGACGGTGCCCCGATGAAGAAAAATACGGCACCACCACATG
* * * *
14449848 -GTCGAGCCCAGCTTGTGCTACT-GTAACACTCGGTCCGGTCCGATCATAGACTGGGAATGAACT
194 CCT-GAG-CC--C-TGTGCT-CTCGCAACACTCGGTCCGATCCGATCATAGACTAGGAATGAACT
* * * * *
14449911 CAGTATGTTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGAGC
253 CAGTATGCTTAGACTGAGAATGAACTCCGTATACCTAAGTCAACCCACGAAACAAGCGTGCGAGC
* * ** ** *
14449976 GCTTAGCCGGCCAGAGGGGCGAGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTA
318 GCTCAGCCGGCCAGAGGGGCGAGATACACAAACCGGGGATCAATCGGGTCCCCCTCTGCGTGCTA
** *
14450041 CCAATCCTGCTACCGTAACCCTCGATCC-GATCCGATCTTAGACTAGG-AATGAACTTCGCATGC
383 CCAATCCTGCTACCACAACCCTCGATCCAGATCCGATCTTAGACT-GGCAATGAACTCCGCATGC
* *
14450104 CTCAGCCAACCGACGAAACGAGAGGGCGAGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACAG
447 CTAAGCCAACCGACGAAAC--GAGCG-GA-CGGGCGGGCGGGCACTACGTCGACCAGAGAGACAG
*
14450169 GATGCGCAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTG
508 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATG
*
14450233 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCA
573 CCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCA
* *
14450298 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTTTTTA
638 TGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTATTT-
* *
14450363 AAAAAAATTTT-GAATGAGTTTTGGCCCCAAAATTGGTAGACGTTATCCTTGTATTTTTGTTGGC
702 -AAAAAATTTTCGAAGGAGTTTTGGCCCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* *
14450427 ATGCACAAAAAAATTCAGCTAAAATCT-TGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAAT
766 AGGCACAAAAAAATTCAGCTAAAAACTCT-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAAT
14450491 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
830 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
14450556 GGGGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGGCCAATATA
895 GGGGGTGTGACTTCTCGAGGCTTGATGAGCGATAGGGGGCCAATATA
14450603 AGGGCCAAGT
Statistics
Matches: 845, Mismatches: 87, Indels: 26
0.88 0.09 0.03
Matches are distributed among these distances:
941 4 0.00
942 172 0.20
943 2 0.00
945 47 0.06
946 175 0.21
947 6 0.01
948 376 0.44
949 56 0.07
950 7 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (941 bp):
GGGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
CATCGCACACCATGTGCGCACACCCCCCAGCTCCCCCGATCGCCAAAACCCCAATGCCGCCAATC
AGGTTCTCCGGCGATGCTCCGACGACGGTGCCCCGATGAAGAAAAATACGGCACCACCACATGCC
TGAGCCCTGTGCTCTCGCAACACTCGGTCCGATCCGATCATAGACTAGGAATGAACTCAGTATGC
TTAGACTGAGAATGAACTCCGTATACCTAAGTCAACCCACGAAACAAGCGTGCGAGCGCTCAGCC
GGCCAGAGGGGCGAGATACACAAACCGGGGATCAATCGGGTCCCCCTCTGCGTGCTACCAATCCT
GCTACCACAACCCTCGATCCAGATCCGATCTTAGACTGGCAATGAACTCCGCATGCCTAAGCCAA
CCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGTCGACCAGAGAGACAGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTT
TATGGCTTCTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTGTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTATTTAAAAAATTTTCGAA
GGAGTTTTGGCCCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCAGGCACAAAAAAATT
CAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTC
GAGGCTTGATGAGCGATAGGGGGCCAATATA
Found at i:14450821 original size:26 final size:26
Alignment explanation
Indices: 14450769--14450821 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14450759 CCGGTCCGAT
* *
14450769 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGAGAATGAACTCCACATG
*
14450795 CTTAGACTGAGAATGAACTCCGCATG
1 CTTAGACTGAGAATGAACTCCACATG
14450821 C
1 C
14450822 ATAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCACATG
Found at i:14451699 original size:26 final size:26
Alignment explanation
Indices: 14451670--14451720 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
14451660 AGTCCGATCA
* *
14451670 TAGACTGGGAATTAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCATATGCT
*
14451696 TAGAGTGGGAATGAACTCCATATGC
1 TAGACTGGGAATGAACTCCATATGC
14451721 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCATATGCT
Found at i:14452119 original size:900 final size:899
Alignment explanation
Indices: 14447133--14457441 Score: 12266
Period size: 900 Copynumber: 11.5 Consensus size: 899
14447123 CCCCCCGACG
* * *
14447133 ATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * ** *
14447198 TCCATATGCTTAGACTGGGAATGAAATTTGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * ** * * * *
14447263 CGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCCATGGATCGGTCGAGTGCCCCTCTGCGTCCT
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * *
14447328 GCCGATCCTGCTGTCGCAA-CCTACGGTCCGGTCTGATTTTAGACTGAGAATGAACTTTGTATGC
196 GCCGATCCTGCTGCCGCAACCCT-CGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGC
* *
14447392 CTAAGCCATCC-AGTGAAACGAGCGGGCGGGCGGGCGGGCAAGCACTACGCCGGCCAGAGAGACG
260 CTAAGCCAACCGA-CGAAACGAGCGGGCGGGCGGGC-GG---GCACTACGCCGGCCAGAGAGACG
* * * *
14447456 GGATGCGCAAGCCGTGGATCGATTGGGGGGTAGGTGGGTTTAGGTACATCTTCATATTTCTACAT
320 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
**
14447521 GCCAATGCCATTTTTATATCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
385 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
** *
14447586 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA-TTTTGT--GGTTCGGGATCTTT
450 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTT-TACGGTTCGGGATTTTT
* * * *
14447648 TAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTATACGTGATCCTTGTATTTTTATTGG
514 TAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * * *
14447713 CATGCGC-AAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTCAACATTTGAAAAAAGT
579 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
14447777 CTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTAA
644 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
14447842 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGCTAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
709 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
** * ** * * * * * *
14447907 CCATTGCACATCATGTGTGCACATTCCCCGAC-CCCCCGATCACCGAAACCCTAACGTCCGTCGG
774 CCATCACACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCGGAACCCCAATG-CCGCCGG
* * * * * *
14447971 TCAGGTTCTCCGACGATGCTCCGGCGACGGTGCCCTGGCGAAGAAAAATACGACACCAGCAC
838 TCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
*
14448033 ATGCCCGAGCCCAGCATGTGCTACCGCAA------------T--G--C-T---C---GAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * *
14448075 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAATGAGCGTGCGGT
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * * * *
14448140 CGCTCAGCTGGCCAGAAGGGTGGGATGCGAAAGCCAGGGATCGGTCAGGTCCCCCTCTGCGTGCA
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * ** * *
14448205 GTCGATCTTGTTGCTACAACCCTC-AGTTCGGT-TCGATCTTAGA-TGGGAATGAAC-TCTGCAT
196 GCCGATCCTGCTGCCGCAACCCTCGA-TCCGGTCT-GATCTTAGACTGGGAATGAACTTC-GTAT
* * * *
14448266 GCCTAAGCCAACTGAC-AAA--A-CGAGCGGGCGGGCAGGCACTACGCCAGCCAGAGAGACGGGA
258 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
* * ***
14448327 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTCGGTTTAGGCACATCTTCATTTTTCTTTGTGCC
323 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* * * *
14448392 AATGCCATTTTTATGCCTTGTAAATTTATACAATGGT-CCTTAAAGCCTTCACGTGAACTTGCAT
388 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT-AAGCCTTCACGTGAAGTTTCAT
* * * ** * *
14448456 GGCAAGATGACTCATTTTCTATTTTTCATAATTTTTGAACCTTTTTTCGGTTCGGGATTTTTTAA
452 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAA
* * * *
14448521 AATTTTTTTGGAAGGCGTTTCGACCCCAAACTTGGTAGACGTGATCCTTTTATTTTT-TTGGCAT
517 AATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
*
14448585 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTC
582 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
14448650 CCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGG
647 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
14448715 GGTGTGAGTTCTCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
712 GGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * * * **
14448780 TCGCACATCATGTGCGCACACCCCCCAGCTCCCCCGATTGTCAGAACCCCACTGTCGCCAATCAG
777 TCACACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* * * * * * *
14448845 GTTCTCCGGTGATGCTTCGGCGACGGTGGCTCGATGAAGAAAAATACGGCACCAGCAC
842 GTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * * *
14448903 ATGCCTGAG-CC--C-TGTGCTGTCGCAACCCTCTGTTCGATCCGATCTTAGACTAGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * * *
14448964 TCCGTATGCTTAGACTGAGAATGAACTCCGTATACCTAAGTTAACCCACGAAACAAGCGTGTGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * * *
14449029 TGCTCAGCCGGCCAGAGGGGCGAGATACGTAAACCGGGGATCAATCGGGTCCCCCTCTGCGTGTT
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * *
14449094 GCCTATCCTGCTGCCACAACCCTCGATCCAGGTCTGATCTTAGACTGGCAATGAACTCCGTATGC
196 GCCGATCCTGCTGCCGCAACCCTCGATCC-GGTCTGATCTTAGACTGGGAATGAACTTCGTATGC
* * *
14449159 CTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATG
260 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
*
14449224 CGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
*
14449289 TGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
390 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* ** * * * *
14449354 AAGACGACTCGTTTTCTATTGTTCATGATTTTTGAAACTTTTTGCGGTTCGTGATTATTTACAAT
455 AAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAAT
* *
14449419 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAGGCA
520 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
14449484 TAAAAAAATTCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
585 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
14449549 ATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
650 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * *
14449614 GTGACTTCTCGAGGTTTGATGAGCGATAGGGGGCCAATATAGGGGTGTGAGTTCTCGAGGCTTGA
715 GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATA--------A------G-GGC--CA
* * * * *
14449679 TGAGGGATAGGGGGCATATATAAGGGCCAAGTACCAGCACCCATCGCACACCATGTGCGCATACC
763 --A--G-TA-----C------CA--G-C-A--CCCATCACACAT-------CATGTGCGCACACC
* ** * * *
14449744 CCCCGACTCCCCCGATCGCCAAAACCCCAATGCCGCCGATTAGGTTCTCCGGCGATGCTCCGACG
799 CCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCG
* *
14449809 ATGGTGCCCCGATGAAGAAAAATGCGGCACCACCAC
864 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
** * * * * * *
14449845 ATGGTCGAGCCCAGCTTGTGCTACTGTAACACTCGGTCCGGTCCGATCATAGACTGGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * *
14449910 TCAGTATGTTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGAG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * *
14449975 CGCTTAGCCGGCCAGAGGGGCGAGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGTGTGCT
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * * * *
14450040 ACCAATCCTGCTACCGTAACCCTCGATCCGATCCGATCTTAGACTAGGAATGAACTTCGCATGCC
196 GCCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCC
* * * * *
14450105 TCAGCCAACCGACGAAACGAGAGGGCGAGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACAGG
261 TAAGCCAACCGACGAAAC--GA--GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* *
14450170 ATGCGCAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGC
322 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
*
14450234 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCAT
387 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* *
14450299 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTTTTTAA
452 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTT-A
*** * * *
14450364 AAAAAATTTT-GAATGAGTTTTGGCCCCAAAATTGGTAGACGTTATCCTTGTATTTTTGTTGGCA
516 AAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
14450428 TGCACAAAAAAATTCAGCTAAAATCTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGT
581 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
14450493 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
646 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * * *
14450558 GGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACG
711 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * *
14450623 ATCGCACATCATGTGTGCACACCCCCCCGGC-CCCTCTATCGCCGGAACACCAATGCCGCCGGTC
776 ATCACACATCATGTGCGCACA-CCCCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGGTC
*
14450687 AGG-T-T----C--T--T----C------G---C--CGAAGAAAAATGCGGCAGCAGCAC
840 AGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* *
14450722 ATGCCCGAGCCCAGCATGTGTTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * *
14450787 TCCATATGCTTAGACTGAGAATGAACTCCGCATGCATAAGTCAACCCACGAAACGAGCGTGCGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* ** * **
14450852 CGCTCAGCCGGCCAAATGGGG-GGGATATGCAAGCCGGGGATTGGCCGGGTCCCCCTCTGCGTGC
131 CGCTCAGCCGGCCAGA-GGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
** * * * ** * * *
14450916 CACCGATCCTGTTGCCGTAACCCTTGATCCGGTCCAATCTAAGACTGGGAATGAACTCCTTATGC
195 TGCCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGC
** * * * * *
14450981 CTAAGCCAACCGGTGAAACGAGTGGGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATA
260 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* *
14451046 TGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
* *
14451111 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACATGAAGTTTCATGGC
390 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * *
14451176 AAGACGACTCGTTTTATATTTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAACT
455 AAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAAT
** * *
14451241 TTTTTTGGAAGGAGTTTTCACCCCAAACTTGGTAGCCATGATCCTTGTATTTTTGTTGGCATGCA
520 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
14451306 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
585 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
14451371 ATTTCAGATACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGT
650 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
14451436 GTGAGTTCTCAAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
715 GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
*
14451501 CACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTT
780 CACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* *
14451566 CTCTGGCGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCAC
845 CTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * * * *
14451621 ATGGCCGAGCCCAACATGTGCTGTCACAACCCTCGGTCCAGTCCGATCATAGACTGGGAATTAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * *
14451686 TCCGTATGCTTAGAGTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCCGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * *
14451751 CGCTTAGCCGGCCAGAGGGGCGGGATGCACAAGGCGGGGATCGGTCGGGTCCCCCTTTGCGTGCT
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* ** * *
14451816 ACCGATCCTGCTATCGCAACCCTCGATCCGGTCTGATCTTAGACTAGGAATGAACTTCGCATGCC
196 GCCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCC
* *
14451881 TAAGCCAACCGACGAAAGGAGCGGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATG
261 TAAGCCAACCGACGAAACGAGC-GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
*
14451946 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
* *
14452011 TGCCATTTTTATGGCTTGTAAATTCACACATTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
390 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * *
14452076 AAGACGACTCGTTTTTTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTTAAAT
455 AAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAAT
* * * *
14452141 TTTTTTGGAAGGAGTTTTTGCCCTAAACTTGGTAGACGTGATCCTTGAATTTTTATTGGCATGCA
520 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
14452206 CAAAAAAATTCAGCTGAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCGTCCCC
585 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * * * *
14452271 ATTTCAGACACTTTAATAGCTACTGGTAGCAAACCTATAAAATCTCAAATGCTTTTTAAAGGGGT
650 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
14452336 GTGAGTTCTTAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGACAAGTACCAGCACCCAT--
715 GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
* * * * * *
14452399 --C-GCA----CG--C-CCCCTCGGCCCCCCCGATCGCCGGAACCCCAATGCTGCAGGTTAGGTT
780 CACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* * * *
14452454 CTCCGGTGATGCTCCGGCGATGGTGGCCCGACGAAGAAAAGTGCGGCACCAACAC
845 CTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* *
14452509 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGTAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* *
14452574 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTATGTCAACCCACGAAACGAGCATGCGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * * *
14452639 CGCTCAGCCGGCCAGATGGGCGGGATGCGCAAGCCGAGGACCGACCGAGTCCCCCTCTCCGTGTT
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * ** * * *
14452704 GTCGACCCTGCTACCACAACCGTCGATTTGGTCTGATCTTAGAATGGGAATGAACTCCGTATACC
196 GCCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCC
** * * *
14452769 TAAGCCAACTAACGAAACGAGCAGGCGGGCGGGCAGGCGGGCACTATGCCGGCCAAAGAGACGGG
261 TAAGCCAACCGACGAAAC--G-A-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* ***
14452834 ATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGC
322 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
*
14452899 CAATGCCATTTTTATGGCTTGTAAATTCAGACAATGGTCCCTTAAGCCTTCACAGTGAAGTTTCA
387 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-GTGAAGTTTCA
* * *
14452964 TGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTA
451 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTA
* * * * * *
14453029 AAATTTTTTCGAAAGGAGTTGTGGCCCCAAACCTGGTAGATGTGATCCTTCTATTTTTGTTGGCA
516 AAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
14453094 TTCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGACTTTGTGACCATTTGAAAAAAGTGT
581 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
*
14453159 TCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
646 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * *
14453224 GGGTGTGAGTTCTCAAGGTTTGACGAGGGATAGGTGGCCAATATAAGGGCCAAGTA--TG-----
711 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * *
14453282 AGCAC-C--CA--T-----CA-----C--CT--CCCGATCGTC-GAACCCCAATGCCACCGGTCA
776 ATCACACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCA
* *
14453327 GGTTCT-C--CGA--------CGATGGTGCACCGACGAAGAAAAATACGGCACCAGCAC
841 GGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
** *
14453375 ATGCCCGAGCCCAGCATGTGCTGTTGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * * **
14453440 TCCGTATGCTTAGACTGAGAATGAGCTCCGAATGCCTAAGTCAACCCACGGAACGAAAGTGCGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * ** * * * *
14453505 CACTCAACCGGCCAAAGGCACGGGATGCGCAAGTCGGGGATCGATCGAGT-TCCCTCTGCATGCT
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * *
14453569 GCCGATCCTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAACGAA-TTCCGTATGC
196 GCCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTT-CGTATGC
14453633 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
260 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* *
14453698 CGCAAGCCGTGGATCGGTAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
* * *
14453763 TGCCATTTTTATGGCCTGTAAATTCATACAAGGGT-CCTTAAGCCTTAACGTGAAGTTTCATGGC
390 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
** *
14453827 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAAT
455 AAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAAT
* * *
14453892 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGGA
520 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
14453957 CAAAAAAATTCTGCTAAAAACTCGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTTCCC
585 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-TCCC
* *
14454022 CATTTCAGACACTTTAACGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
649 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
** *
14454087 TGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCATC
714 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
*
14454152 ACACATCATGTGCGCAC-CCCCCCTGGC-CCCTCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
779 ACACATCATGTGCGCACACCCCCC-GGCTCCC-CCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* * **
14454215 GTTATCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCAC
842 GTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * *
14454273 ATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCAGTTCAGATTCGATCTTAGAACTGGGAAATG
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GGTCCGGTCCGATCTTAG-ACTGGG-AATG
* ** * *
14454338 AACTCCGTATGCCTATAGACTGGGAAATAAACTCTATATGACTAAGTCAAACCCACGGGAGACGA
63 AACTCCGTATG-CT-TAGACTGGG-AATGAACTCCGTATGCCTAAGTC-AACCCAC--GAAACGA
* * * * ** * **
14454403 GCATGGCGGGCACTCGAACCGGCCAGAGGGGC-GGATGCCCAAG-TTGGGATCTATCGGGT-CTG
122 GCGT-GCGGGCGCTC-AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* ** **
14454465 CTCTGCGTGC-GCCAATTCCCTGCTG-CATAACCCTCGGCCCGGTCTGATCTTAGACTGGGAATG
185 CTCTGCGTGCTGCCGA-T-CCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATG
* * * * * *
14454528 AACTCCGTATGCTTAAGCCAACCGACAAAACGAGCGGGCGGAC-GGC---CACTACGTCGGCCAA
248 AACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAG
14454589 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
313 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
** * *
14454654 TCTGTGTGCCAATGCC-GTTTTATGGCTTGTAAATTCAGACAATGGTCCCCTTAAGGCCTTCCAC
378 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT-CCCTTAA-GCCTT-CAC
** *
14454718 GTGAAGTTTCATGGCAAAGAC-ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTT
440 GTGAAGTTTCATGGC-AAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTT
** ** * * *
14454782 CATGATTTTTTAAAATTTTTTCAGAAGGAGATTTGGCCCTAAACTTGGTAGACGTGATCCTTCTA
504 CGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* * * * * *
14454847 TTTTTTTTGGCATGCATAAAAAAATTCTGCTAAAAATTTGAAGTGTACAAGATATTGTGACCATT
569 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * * * *
14454912 TGAAAAAATTGTCCCCATTTTAGACACTTTAATGGCTACTAGCATCAAACCTATAAAATCTCAAA
634 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* **
14454977 CGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAA
699 TGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * * *** *
14455041 GTACCAGCACCCATCACACATCATGTGTGCACCCCCCCCGGC-CCAGCCGATCGCAAAAACCTCA
764 GTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCTCC-CCCGATCGCCGGAACCCCA
* * * * * * **
14455105 ATGCTGTCGGTCAGGTTCTTCGGTGATGCTCCGGCGATGGTGCCCCAATGAAGAAAAATGTAGCA
828 ATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCA
14455170 CCAGCAC
893 CCAGCAC
* * *
14455177 ATGCCCGA-CCTAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGATTGGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* *
14455241 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACAAAACGAGCGTGCGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* ** * * * * *
14455306 CGCTCAGCCGACCAGAGGGATGGGATGCGTAAGCTGGGGATCG-GCTGGGTCCCCCTTTGCATGC
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGC
* * * * ** *
14455370 TGTCGATCCTGCTGCCGTAACCCTTGGTCCGGTCCAATCTTAGATTGGGAATGAAC-TCTGTATG
195 TGCCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTTC-GTATG
* * * * * * * * *
14455434 CCTAAGCCAACCGACGAAACAAACGGACGAGTGGGCGAGCACTACGTCGGCTAGAGAGACGAGAT
259 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
** * * *
14455499 TTGCAAGCCGTGGATCGATAGGGTGGTACGTGGGTTTAGGCACATGTTCATATTTCTTGCGTGCC
324 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-TGCATGCC
* *
14455564 AATGCCA-TTTTATGGC-TGTCAATTCATACAACTGGTCCCTTAGGCCTT-ACAGTGAAGTTTCA
388 AATGCCATTTTTATGGCTTGTAAATTCATACAA-TGGTCCCTTAAGCCTTCAC-GTGAAGTTTCA
* * * *
14455626 TGGCAAGACGATTCCTTTT-TCATTTTTCACGATTTT-GAAACTTTTTACGGTTCGGGATTTTTT
451 TGGCAAGACGACTCGTTTTCT-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGA-TTTTT
* * ** *
14455689 TTAAACTTTTTTCAAAGGAG-TTTGGCCCCAAACTTGGTAGATGTGATCCTTTGTA-TTTTGTTG
514 TAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTG
* ** *
14455752 GGATG--CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAGCTGAAAAAAT
578 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
14455815 TGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTAAAATGCTCTTTA
643 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
** * * * * *
14455880 AAAGGGTATGAGTTCTCAACGTTTGATGAGGGATAGGGGACCAATATAAGGACCAAGTACGAGCA
708 AGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * * * * *
14455945 CCCTTCGCACATCATGGGCGCACACCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGA
773 CCCATCACACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGG
* * * * * *
14456010 TCAAGTTCTCCGGCGATGCTCCGTCGATGGTGCCCCGGCGAAGAAAAATACGACACTAGCAC
838 TCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * *
14456072 ATGCCC-AGCCTAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTTGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* *
14456136 TCCGTATGCTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * * * * *
14456201 CGCTCAGTCGACCAGAGGGGCAGGATGCGTAAGCCGAGGATCGATCGAGTCTCGCTCTACGTGC-
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * * * * *
14456265 GTCTGATACTACTGTCGAAACCCTTGATCTGGTCTGATCTTAGACTGTGAATGAATTTCGTATGC
196 G-CCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGC
* * * * * * * *
14456330 CTAAGCCAACTGATGAAACGAAGCGGGCGGGTGGGTGGGCGGACACTAGGCCGACCAGAGAGGCA
260 CTAAGCCAACCGACGAAACG-AGCGGGC----GGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* * * *
14456395 AGATTCGCTAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACAT
320 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* * * *
14456460 GCCGATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAATCCTTCACGCGAAGTTTC
385 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * * *
14456525 ATGGTAAGACGACTCATTTTCTATTTTTTATGATTTTCAAAACTTTTTACGATTCGGGATTTTCT
450 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTT
* * * * *
14456590 AAAATTTTTTCGGAAGGAATTTTGGCCCCAAGCTTCGTAGACATGATCCTTGTATTTTTGTTGGC
515 AAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
14456655 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
580 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * *
14456720 TCCCCATTCCAGACACTTTAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAA
645 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * *
14456785 GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAAGGGGCGAATATAAGGGCCAAGTACTAGCACC
710 GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * * * *
14456850 CATCGCACATCATTTGTGCACACCCCCCTCCCGG-TACCCCCGATTGCCGAAACCCTAATGCCGT
775 CATCACACATCA--TGTGCGCA-CACCC-CCCGGCT-CCCCCGATCGCCGGAACCCCAATGCCGC
* * ** * * * *
14456914 CTGTTAGGTTCTCCGGCGATGCTCCAACGATAGTGCCCCGACAAAGAAAAATGTGGCCCCAGCAC
835 CGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* ** * * *
14456979 ATGCCCAAGCCCAGCATGTATTGCCGTAACCCTCGATCCGGTCCGATCTTAGACTAGGAATGAAC
1 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
* * * *
14457044 TTCGTATGCTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCTCGAAACAAGCGTGCGGG
66 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
** ** * * * * * *
14457109 CGCTCAGTAGGCCAGAGGGGCATGTTTCGCAAGCCGGGGATCGGTTGGGTCACCCTCTGTGTGCT
131 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * *
14457174 ACCGATCCTGCTGCCACAACCCTC-AGTCCAGTCTGATCTTAGACTGGGAATGAAC-TCTGTATG
196 GCCGATCCTGCTGCCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTTC-GTATG
** * * * * * * *
14457237 CAAAAGCCAACGGACGAAAC-A---AGCGGGCGGGCGGGAACTGCGCCAGCCGGTGAGACGGGAT
259 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * *
14457298 GCGCAAGCCGTGGATCGATAGGGTGCTAGGTGGGTTTAGGCACATCTTAATATTTTTGCATGCCA
324 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* * * *
14457363 ATGCTATTTTTATGGCTTGTAAATACATACAATGGTCCCTTAAGCCTTTACGTGAAGTTTCGTGG
389 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
*
14457428 CAAGATGACTCGTT
454 CAAGACGACTCGTT
14457442 CTCCGGCGAT
Statistics
Matches: 8097, Mismatches: 1059, Indels: 507
0.84 0.11 0.05
Matches are distributed among these distances:
859 187 0.02
860 127 0.02
861 132 0.02
862 2 0.00
863 1 0.00
864 1 0.00
865 76 0.01
866 201 0.02
867 9 0.00
868 174 0.02
869 16 0.00
870 333 0.04
871 17 0.00
872 13 0.00
873 72 0.01
874 450 0.06
875 7 0.00
876 27 0.00
877 423 0.05
878 17 0.00
879 1 0.00
880 4 0.00
881 1 0.00
882 4 0.00
883 2 0.00
884 3 0.00
885 2 0.00
886 12 0.00
887 27 0.00
888 332 0.04
889 138 0.02
890 18 0.00
891 180 0.02
892 317 0.04
893 19 0.00
894 172 0.02
895 689 0.09
896 263 0.03
897 80 0.01
898 86 0.01
899 533 0.07
900 697 0.09
901 94 0.01
902 80 0.01
903 317 0.04
904 162 0.02
905 116 0.01
906 196 0.02
907 191 0.02
908 251 0.03
909 21 0.00
910 1 0.00
911 4 0.00
912 1 0.00
913 2 0.00
915 2 0.00
917 1 0.00
918 2 0.00
921 1 0.00
923 1 0.00
926 2 0.00
927 1 0.00
929 2 0.00
931 2 0.00
932 1 0.00
933 4 0.00
934 1 0.00
935 8 0.00
940 1 0.00
942 103 0.01
943 2 0.00
945 48 0.01
946 173 0.02
947 2 0.00
948 374 0.05
949 65 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (899 bp):
ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
GCCGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCC
TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
AGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
TTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
TGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCAC
ACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
TCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
Found at i:14452585 original size:26 final size:26
Alignment explanation
Indices: 14452556--14452608 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14452546 CCGGTCTGAT
*
14452556 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14452582 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14452608 C
1 C
14452609 CTATGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14453451 original size:26 final size:26
Alignment explanation
Indices: 14453422--14453474 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14453412 CCGGTCCGAT
* *
14453422 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGAATG
*
14453448 CTTAGACTGAGAATGAGCTCCGAATG
1 CTTAGACTGAGAATGAACTCCGAATG
14453474 C
1 C
14453475 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGAATG
Found at i:14455252 original size:26 final size:26
Alignment explanation
Indices: 14455223--14455275 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14455213 CCAGTCCGAT
*
14455223 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14455249 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14455275 C
1 C
14455276 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14456147 original size:26 final size:26
Alignment explanation
Indices: 14456118--14456170 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14456108 CCGATCCGAT
* *
14456118 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14456144 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14456170 C
1 C
14456171 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:14456215 original size:895 final size:895
Alignment explanation
Indices: 14453331--14457441 Score: 4897
Period size: 895 Copynumber: 4.6 Consensus size: 895
14453321 CGGTCAGGTT
*
14453331 CTCCGACGATGGTGCACCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
1 CTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
** * *
14453396 TGTTGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGAGAA
66 TGCCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * ** * * * *
14453461 TGAGCTCCGAATGCCTAAGTCAACCCACGGAACGAAAGTGCGGGCACTCAACCGGCCAAAGGCAC
131 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAC
* * *
14453526 GGGATGCGCAAG-TCGGGGATCGATCGAGT-TCCCTCTGCATGCTGCCGATCCTGCTGCCGCAAC
196 GGGATGCGCAAGCT-GGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAAC
* * * * *
14453589 CCTCGGTCCAGTCTGATCTTAGACTGGGAACGAATTCCGTATGCCTAAGCCAACCGACGAAACGA
260 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACAA
* *
14453654 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGGTAGG
325 GCGGGC-GGTGGGC-GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
* *
14453719 GTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCCTGTAA
388 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
*
14453784 ATTCATACAAGGGT-CCTTAAGCCTTA-ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
453 ATTCATACAATGGTCCCTTAAGCCTTACACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** *
14453847 TTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGG
518 TTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCAAAGGAGATTTGG
* *
14453912 CCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGGACAAAAAAATTCTGCTAAAAA
582 CCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCAT-GACAAAAAAATTCAGCTAAAAA
* *
14453977 CTCGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTTCCCCATTTCAGACACTTTAACGG
646 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-TCCCCATTTCAGACACTTTAATGG
* * * **
14454042 CTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGA
710 CTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGA
*
14454107 TGAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCATCACACATCATGTGCGCAC-CC
775 TGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACC
* * * * *
14454171 CCCCTGGCCCCTCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTATCCGACGATG
839 CCCC-GGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATG
* *
14454229 CTCCGGCGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGC
1 CTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * *
14454294 TGCCGTAACCCTCAGTTCAGATTCGATCTTAGAACTGGGAAATGAACTCCGTATGCCTATAGACT
66 TGCCGTAACCCTC-GGTCCGATCCGATCTTAG-ACTGGG-AATGAACTCCGTATG-CT-TAGACT
* ** * * * * *
14454359 GGGAAATAAACTCTATATGACTAAGTCAAACCCACGGGAGACGAGCATGGCGGGCACTCGAACCG
126 GGG-AATGAACTCCGTATGCCTAAGTC-AACCCAC--GAAACGAGCGT-GCGGGCGCTC-AGCCG
* * * * ** *
14454424 GCCAGAGGGGC-GGATGCCCAAG-TTGGGATCTATCGGGT-CTGCTCTGCGTGC-GCCAATTCCC
185 GCCAGAGGGACGGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGA-T-CC
** * * *
14454485 TGCTG-CATAACCCTCGGCCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAAGCCAA
248 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
* * ** * *
14454549 CCGACAAAACGAGCGGGCGGACGGC--CACTACGTCGGCCAAAGAGACGGGATGCGCAAGCCGTG
313 CCGACGAAACAAGCGGGCGGTGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
** *
14454612 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCC-GTTTTA
378 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* *
14454676 TGGCTTGTAAATTCAGACAATGGTCCCCTTAAGGCCTTCCACGTGAAGTTTCATGGCAAAGAC-A
443 TGGCTTGTAAATTCATACAATGGT-CCCTTAA-GCCTTACACGTGAAGTTTCATGGC-AAGACGA
* **
14454740 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCATGATTTTTTAAAATTTTTTCA
505 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * * *
14454805 GAAGGAGATTTGGCCCTAAACTTGGTAGACGTGATCCTTCTATTTTTTTTGGCATGCATAAAAAA
570 -AAGGAGATTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATG-ACAAAAAA
* * * * * *
14454870 ATTCTGCTAAAAATTTGAAGTGTACAAGATATTGTGACCATTTGAAAAAATTGTCCCCATTTTAG
633 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * *
14454935 ACACTTTAATGGCTACTAGCATCAAACCTATAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTT
698 ACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
**
14455000 CTTGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
763 CTCAAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
* * ** * * * * *
14455065 GTGTGCACCCCCCCCGGCCCAGCCGATCG-CAAAAACCTCAATGCTGTCGGTCAGGTTCTTCGGT
828 GTGCGCACACCCCCCGGCCCCCCCGATCGTC-GAAACCCCAATGCCGTCGGTCAGGTTCTCCGGC
14455129 GATG
892 GATG
* * * *** *
14455133 CTCCGGCGATGGTGCCCCAATGAAGAAAAATGTAGCACCAGCACATGCCCGA-CCTAGCATGTGC
1 CTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* *
14455197 TGCCGCAACCCTCGGTCC-AGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGA
66 TGCCGTAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * *
14455261 ATGAACTCCGTATGCCTAAGTCAACCAACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGA
130 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGA
* * * * * * *
14455326 TGGGATGCGTAAGCTGGGGATCG-GCTGGGTCCCCCTTTGCATGCTGTCGATCCTGCTGCCGTAA
195 CGGGATGCGCAAGCTGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAA
* ** *
14455390 CCCTTGGTCCGGTCCAATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACA
259 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACA
* * * * * **
14455455 AACGGACGAGTGGGCGAGCACTACGTCGGCTAGAGAGACGAGATTTGCAAGCCGTGGATCGATAG
324 AGCGGGCG-GTGGGCG-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* * *
14455520 GGTGGTACGTGGGTTTAGGCACATGTTCATATTTCTTGCGTGCCAATGCCA-TTTTATGGC-TGT
387 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-TGCATGCCAATGCCATTTTTATGGCTTGT
* * * *
14455583 CAATTCATACAACTGGTCCCTTAGGCCTTACA-GTGAAGTTTCATGGCAAGACGATTCCTTTT-T
451 AAATTCATACAA-TGGTCCCTTAAGCCTTACACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* *
14455646 CATTTTTCACGA-TTTTGAAACTTTTTACGGTTCGGGATTTTTTTTAAACTTTTTTCAAAGGAG-
515 -ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA--TTTTTTAAAATTTTTTCAAAGGAGA
** *
14455709 TTTGGCCCCAAACTTGGTAGATGTGATCCTTTGTA-TTTTGTTGGGATG-CAAAAAAATTCAGCT
577 TTTGGCCCCAAACTTGGTAGACATGATCC-TTGTATTTTTGTTGGCATGACAAAAAAATTCAGCT
** *
14455772 AAAAACTCGAAGTGTACAAGATTTTGTGACCAGCTGAAAAAATTGTCCCCATTTCAGACACTTTA
641 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * * *
14455837 ATGGCTACTAGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAAAGGGTATGAGTTCTCAACGT
706 ATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGT
* * * * *
14455902 TTGATGAGGGATAGGGGACCAATATAAGGACCAAGTACGAGCACCCTTCGCACATCATGGGCGCA
771 TTGATGAGGGATAGGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCA
* * * *
14455967 CACCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCAAGTTCTCCGGCGATG
835 CACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATG
* * * * *
14456028 CTCCGTCGATGGTGCCCCGGCGAAGAAAAATACGACACTAGCACATGCCC-AGCCTAGCATGTGC
1 CTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
** * *
14456092 TGCCACAACCCTCGGTCCGATCCGATCTTAGACTTGGAATGAACTCCGTATGCTTAAACTGGGAA
66 TGCCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * *
14456157 TGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGTCGACCAGAGGGGC
131 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAC
* * * * * * * * * * * * *
14456222 AGGATGCGTAAGCCGAGGATCGATCGAGTCTCGCTCTACGTGC-GTCTGATACTACTGTCGAAAC
196 GGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTGCGTGCTG-CCGATCCTGCTGCCGCAAC
* * * * * * *
14456286 CCTTGATCTGGTCTGATCTTAGACTGTGAATGAA-TTTCGTATGCCTAAGCCAACTGATGAAACG
260 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGACGAAAC-
* * * ** * *
14456350 AAGCGGGCGGGTGGGTGGGCGGACACTAGGCCGACCAGAGAGGCAAGATTCGCTAGCCGTGGATC
323 AAGCGGGC-----GGTGGGCGG-CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
14456415 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCGATGCCATTTTTGTGGC
382 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* * * *
14456480 TTGTAAATTCATACAATGGTCCCTTAATCCTT-CACGCGAAGTTTCATGGTAAGACGACTCATTT
447 TTGTAAATTCATACAATGGTCCCTTAAGCCTTACACGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** * * *
14456544 TCTATTTTTTATGATTTTCAAAACTTTTTACGATTCGGGATTTTCTAAAATTTTTTCGGAAGGA-
512 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-AAAGGAG
* *
14456608 ATTTTGGCCCCAAGCTTCGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
576 A-TTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATG-ACAAAAAAATTCAG
*
14456673 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTT
639 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14456738 TAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAG
704 TAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAG
* * *
14456803 GTTTGATGAGGGATAAGGGGCGAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATTTGTG
769 GTTTGATGAGGGAT-AGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCA--TGTG
* * ** * * * * *
14456868 CACACCCCCCTCCCGGTACCCCCGATTGCCGAAACCCTAATGCCGTCTGTTAGGTTCTCCGGCGA
831 CGCA-CACCC-CCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
14456933 TG
894 TG
* * * ** * * **
14456935 CTCCAACGATAGTGCCCCGACAAAGAAAAATGTGGCCCCAGCACATGCCCAAGCCCAGCATGTAT
1 CTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * *
14457000 TGCCGTAACCCTCGATCCGGTCCGATCTTAGACTAGGAATGAACTTCGTATGCTTAAACTGGGAA
66 TGCCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * ** *
14457065 TGAACTCCGTATGCCTAAGTCAACCCTCGAAACAAGCGTGCGGGCGCTCAGTAGGCCAGAGGGGC
131 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAC
** * * * * * * * * *
14457130 ATGTTTCGCAAGCCGGGGATCGGTTGGGTCACCCTCTGTGTGCTACCGATCCTGCTGCCACAACC
196 GGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * ** *
14457195 CTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCTGTATGCAAAAGCCAACGGACGAAACAAG
261 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACAAG
* * * * * *
14457260 CGGGCGG-GCG-GGAACTGCGCCAGCCGGTGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
326 CGGGCGGTGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* * * * *
14457323 CTAGGTGGGTTTAGGCACATCTTAATATTTTTGCATGCCAATGCTATTTTTATGGCTTGTAAATA
391 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
14457388 CATACAATGGTCCCTTAAGCCTT-TACGTGAAGTTTCGTGGCAAGATGACTCGTT
456 CATACAATGGTCCCTTAAGCCTTACACGTGAAGTTTCATGGCAAGACGACTCGTT
14457442 CTCCGGCGAT
Statistics
Matches: 2754, Mismatches: 385, Indels: 147
0.84 0.12 0.04
Matches are distributed among these distances:
892 12 0.00
893 19 0.01
894 174 0.06
895 432 0.16
896 88 0.03
897 61 0.02
898 106 0.04
899 283 0.10
900 195 0.07
901 98 0.04
902 43 0.02
903 304 0.11
904 166 0.06
905 123 0.04
906 189 0.07
907 195 0.07
908 251 0.09
909 15 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (895 bp):
CTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
TGCCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAC
GGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACAAG
CGGGCGGTGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
CATACAATGGTCCCTTAAGCCTTACACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
CATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAGGAGATTTGGCCCC
AAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGACAAAAAAATTCAGCTAAAAACTCGA
AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTA
GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
ATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGC
CCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATG
Found at i:14457064 original size:26 final size:26
Alignment explanation
Indices: 14457026--14457078 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14457016 CCGGTCCGAT
* *
14457026 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAAACTAGGAATGAACTCCGTATG
*
14457052 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTAGGAATGAACTCCGTATG
14457078 C
1 C
14457079 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAAACTAGGAATGAACTCCGTATG
Found at i:14457572 original size:26 final size:26
Alignment explanation
Indices: 14457543--14457595 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14457533 CTGATCCGAT
* *
14457543 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAAACTAGGAATGAACTCCGTATG
14457569 CTTAAACTAGGAATGAACTCCGTATG
1 CTTAAACTAGGAATGAACTCCGTATG
14457595 C
1 C
14457596 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAAACTAGGAATGAACTCCGTATG
Found at i:14458495 original size:26 final size:26
Alignment explanation
Indices: 14458445--14458497 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14458435 CTAGTCCGAT
*
14458445 CTTAGACTGGGAATGAACTTAGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
*
14458471 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
14458497 C
1 C
14458498 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCAGTATG
Found at i:14459988 original size:12 final size:12
Alignment explanation
Indices: 14459971--14460003 Score: 57
Period size: 12 Copynumber: 2.8 Consensus size: 12
14459961 ATGAGGGATA
14459971 AGGGGCCAATAT
1 AGGGGCCAATAT
14459983 AGGGGCCAATAT
1 AGGGGCCAATAT
*
14459995 AAGGGCCAA
1 AGGGGCCAA
14460004 GTACCAGCAC
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
12 20 1.00
ACGTcount: A:0.36, C:0.18, G:0.33, T:0.12
Consensus pattern (12 bp):
AGGGGCCAATAT
Found at i:14461084 original size:26 final size:26
Alignment explanation
Indices: 14461055--14461107 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14461045 CCGGTCTGAT
* *
14461055 CTTATACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14461081 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14461107 C
1 C
14461108 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14461666 original size:891 final size:886
Alignment explanation
Indices: 14459461--14466248 Score: 7853
Period size: 891 Copynumber: 7.7 Consensus size: 886
14459451 GTTGGGTCCC
*
14459461 CCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGC--GA-GCGGG
1 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGCGGG
* * * * * *
14459523 TGG-GTG--CTGCACCGGCCA-AGGAGACGGGATGCGTAAGTCGTGGATGGATAGGGTGGTAGGT
66 TGGCGGGCACTACGCCGGCCAGA-GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * * *
14459584 GGGTTTGGGCACATATTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTACATTCATACA
130 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * * *
14459649 ATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGGTT
195 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * *
14459714 TTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGAAAGATGTTTTGGCCCCAAACTT
260 TTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAGGA-GTTTTGGCCCCAAACTT
** * *
14459779 CATAGACGTGATCCTTGAATTTTTTTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTA
324 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
14459844 CAAGATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCA
389 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
14459909 AACCTGTAAAATGTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGG
454 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT-A--
* *
14459974 GGCCAATATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCCCACATCATGTGCGCACAGC
516 -G--------GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * * *
14460039 CCCCCGACCCCCCTGATCGTCGAAAACCCCAATGTCGCCGATCAGGTTCTCTGGCGATGCTCCGG
572 CCCCCGGCCCCCCTGATCGTC-AGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT-C-G
** * * * * **
14460104 TGATGGTGCCCCGGTGAAGAAAAAT-TCAGCACCAGCACATGCCTGAGCCTAGCATGTTCTATCG
634 TGATGGTGCCCCGACGAAGAAAAATGT-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
14460168 TAACCC-T--T---G---G----T---CT--G---G---TCCG-AT-CTTAGACTGGAAATGAAC
698 CAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
14460207 TCCGTATGCCTAAGTCAACTCATGAAACGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGAT
763 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
** * * * * * **
14460272 GCGCAAGCCAAGGATC-GCTCAGGT-CCTCTCTGCGTGCTGTCGATCCTACTGCCATAACCCTCG
828 GCGCAAGCCGGGGATCGGC-CGGGTCCCCCTCTGCGTGCTGCCG-T--AAC--CC-TCA-GTTCG
14460335 AT
885 AT
* * * * *
14460337 CCGATCTTAGATTGGGAATTAACTCCGTATGCCTAAGCAAATCGATGAAACGAGC--GA-GCGGG
1 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGCGGG
* * *
14460399 TGGGTGGGCACTACGCCGGCCAGAGGGACGGGATGCGCAAGGCGTGGATCGATAGGGTGGTAGGT
66 T-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * *
14460464 GGGTTTAGGCACATCTTCATATTTCAGCGTGTCAATGCCATTTTTATGGATTGTAAATTCATACA
130 GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * * *
14460529 ATGGTTCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC-ATTTCTATTTTTCATGATT
195 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * **
14460593 TTCAAAACTTTTTATGGTTAAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
260 TTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTT
* * * *
14460658 GGTAGACGTGATCCGTT-TATTTTTGTTGGCTTGCACAAAAAAGTCAGCTAAAAACTCAAAGTGT
324 GGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGT
14460722 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
388 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * **
14460787 GAACCTATAAAATCTCAAATAATCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
453 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * *
14460852 GGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGTAAACCCCCCCGGCCCC
518 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC
* * * *
14460917 CCTAATCATCAGAACCCCAATGCCACCGGTTAGGTTCTCCGGCGATGCTCCGGTGATGGTGCCCC
583 CCTGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT-C-GTGATGGTGCCCC
* *
14460982 GACGAAGAAAAATGTGGCCCCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCC
646 GACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCC
* * *
14461047 GGTCTGATCTTATACTGGGAATTAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
711 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
14461112 GTCAACACACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCTGGGG
776 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
14461177 ATCGGCCGGGTCCCCCTCTGCGTGCTGCCGTAACCCTCAGTTCGAT
841 ATCGGCCGGGTCCCCCTCTGCGTGCTGCCGTAACCCTCAGTTCGAT
* * * *
14461223 CTGATCTTAGGCTGGGAATGAACTCCGTATGCCTAGGCCAACCGATGAAACGAGCGGGCAGGCGG
1 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-AGGCGG
* * * *
14461288 GCGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAATCCGTAGATCGATATGGTGGTAGG
65 GTGG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * *
14461353 TGGGTTTAGGCGCATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
129 TGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * *
14461418 AATGGTCCCTTAAGTCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATCTTTCATGAT
194 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * * * *
14461483 TTACGAAACTTTTTACGATTCGGGATATTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCAAAAAT
259 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACT
* * * * *
14461548 TCGTAGACATGATCCTTGAATTTTTGTTGGCATGCATAAAAAATTCAGCTAAAAAATCGAACG-G
323 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAA-GTG
* *
14461612 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATTCAGACACTTTAATGGCTACTAGCAG
387 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
14461677 CAAACCTTTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAG
452 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * **
14461742 GGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGTACATCGCGTGCGCACACCCCTACCCGGC
517 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC--CCCGGC
* * * ** * * *
14461807 CCCCCCGACCGTCGGAACCCCAATGCC-ATGGTCAGGTTAT-CGACGATGCTTCGACGATGGTGC
580 CCCCCTGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGC-TCG-TGATGGTGC
* * * *
14461870 CCCGACGAAGAAAAATGCGGCACCAACACATGCCCTG-GCCCAGCATGTGTTGTCGCAACCCTTG
643 CCCGACGAAGAAAAATGTGGCACCAGCACATGCCC-GAGCCCAGCATGTGCTGCCGCAACCCTTG
** ** *
14461934 GTTTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGGTTAGACTGGGAATGAACTCCGTATGC
707 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * * * * * *
14461999 CTAAGTCAACACACGAAATGAACGTGCGGGTGCTTAGCCAGCCAGAGGGGCGAGATGTGCAAGCC
772 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
* * *
14462064 GGGGATCGGCCGGGTCCCCCTCTGTGTGCTGTCGTAACCCTC-GGTCTGAT
837 GGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGTAACCCTCAGTTC-GAT
* * *
14462114 CTC-ATCTTAGACTGGGAGTGAACTCCGTATGCCTAAGCCAACCGATG-AA--A-C--GA-GTGG
1 C-CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGCGG
* * *
14462171 GTGGACGGGCACTACGCCGGCCAGAGAGACTGGATGTGCAAGCTGTGGATCGATAGGGTGGTAGG
65 GTGG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
14462236 TGGGTTTTGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
129 TGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
*
14462301 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCTTTTTCTATTTTTCACGAT
194 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * * *
14462366 TTTCCAAACTTTTTACGGTTCGAGAATATTTAAAATTTTTTCGAAAGGAAG-TTTGGCCCCAAAC
259 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG-AAGG-AGTTTTGGCCCCAAAC
* * *
14462430 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCCTGCATAAAAAAATTCAGCCAAAAACTCAAAGT
322 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGT
14462495 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
386 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
14462560 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATA
451 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
14462625 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-G-C
516 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC
* * * * * *
14462687 CCCCTGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCTCCAGTGATGCTCCGACGATGGTGCC
581 CCCCTGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT-CG-TGATGGTGCC
* * ** * * *
14462752 CCGATGAAGAAAAATGTGTCACCAGCACATGCGTGAGCCCAGCATGTGCTACCACAACCC-TCGT
644 CCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGT
* * *
14462816 CTGGTCCGATGTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
709 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * **
14462881 AAGTCAACCCACGTAACGAGCGTGCGGGCGCTCAACCGGCCAGAAGGGCGGCATGCGCAAGCTAG
774 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * * *
14462946 GGATCGGTCGGGTCACCCTCTGTGTGCTGCCGATCTTACTGTCGTAACCCCCAG-TCTGGT
839 GGATCGGCCGGGTC-CCC-C----T-CTG-CG----TGCTGCCGTAACCCTCAGTTC-GAT
* * ** * * *
14463006 CCGATCTTAGATTGGGAATGAACTCCATATGCCTGCGCCAACTGACGAAACGAGCGGGCGG-GCG
1 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGCGGG
*
14463070 -GGAGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
66 TGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
14463134 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
131 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
14463199 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCACGATTT
196 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* ** * * *
14463264 T-GAAAACATTTTGTGGTTCAGGA-TTTTTAAATATTTTTTTGGAAGGAGTTTTGGCCCTAAACA
261 TCG-AAACTTTTTACGGTTCGGGATTTTTTAAA-A-TTTTTTCGAAGGAGTTTTGGCCCCAAAC-
14463327 TT-GTAGACGTGATCCTTGTATTTTTGGTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
322 TTGGTAGACGTGATCCTTGTA-TTTT--TGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGA
* * * *
14463391 AGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCACA-TTCAAACACTTTATTGGCTACTG
383 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* *
14463455 GCAGCAAACCTGTAAAATCTCAAATGTTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGCTGAGGG
448 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* * * *
14463520 ATAGGGGGCCAATATAAGGGCCAAGTATCGGCACCCATCGCACATGATGTGCGCACA-CCCCCCA
513 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG
* * * ** * *
14463584 TCTCCCCTGATCGCCAGAACCTGAATGTCGTCGGTCAGGTTCT-C--CGA------TGA---TGC
578 GCCCCCCTGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCGTGATGGTGC
** * * * *
14463637 CCCGAC-AGAGAAAAATGCAGCACCAGCCCATGCCCAAGCCCAGAATGTCCTGCCGCAACCCTTG
643 CCCGACGA-AGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTG
* * * **
14463701 CTCCGATCCGATCTTAGATTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGC
707 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
14463766 CTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGTCAGCCAGAGGGGCGGGATGCGCAAGCT
772 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
* * * * *
14463831 GGTGATCGGCCGGGTCCCCCTCTACGTGCCGCTAATCCTACTACCGTAACCCTCGGTCCGAT
837 GGGGATCGGCCGGGT-CCCC-CT-C-TG-CG-------TGCTGCCGTAACCCTCAGTTCGAT
* * * *
14463893 CTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCGG
1 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-AGGCGG
* * * * * * *
14463958 GCAGGTGGGCACTACTCCGGCCAGAGAGACGTGATGCGCAAGTCGTGCATCGATAGGGTGGTGGG
65 G-TGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* ** * * *
14464023 TGGTTTTAATCATATCTTCATATTTCTTCGTGCCAATGGCATTTTTATGGCTTGTAAATTCATAC
129 TGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * * *
14464088 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCATGAT
194 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * *** * * * *
14464153 TTTCAAAAATTTTTGTTGTTCGGGATTTTGT--GATCCTTGT-G-A--AG-TTT-----CAAACT
259 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAAT-TTTTTCGAAGGAGTTTTGGCCCCAAACT
* * *
14464206 TGGTAGCCGTGATCCTTGTATTTTTTTTGGCATGCAAACAAAAATTGAGCTAAAAACTCGAAGTG
323 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAA-AAAAATTCAGCTAAAAACTCGAAGTG
* * *
14464271 TACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAG
387 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * *
14464336 CAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGTGATA-
452 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * *
14464400 GGGGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCAGCCC
517 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC
* * * * * *
14464465 CCCCGATCATC-GAAACCCTAATGCCACCGATCAGGTTCTCCGACGATGCTC----TGGT-----
582 CCCTGATCGTCAG-AACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCGTGATGGTGCCCC
* * * *
14464520 ---GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGTCGCAACCCTCGGTCC
646 GACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCC
* *
14464582 GATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAA
711 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
14464647 TTTAACCAACGAAACGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGCATGCGTAAGCCGGGG
776 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * *
14464712 ATCAGCCAGGTCCCCCTCTACGTGCTGCCATTCTTGCTGCCGCAACCCTC-GGTCTGGT
841 ATCGGCCGGGT-CCCC-CT-C-TGC-G-------TGCTGCCGTAACCCTCAGTTC-GAT
* * * *
14464770 CCAACCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGA--GTG-GGC--G
1 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGCGGG
* * * *
14464830 -GGCGGGCACTACGCCGGTCAAAGAGACGGGATGGGCAAGCCGTGGATCAATAGGGTGGTAGGTG
66 TGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * *
14464894 GGTTTAAGCACATCTTTATCTTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
131 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * * *
14464959 TGGCCCCTTAAGCCTTCACAG-GAAGTTTCAAGGCAAGATGACTCATTTTCTATTTTTCACGAAT
196 TGGTCCCTTAAGCCTTCAC-GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG-AT
* *
14465023 TTT-GAAACTTTTTACGGTTTGGGATTTTTTAAAAGTTTTTTCGAAAGGAGTTTTGGCCACAAAC
259 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCG-AAGGAGTTTTGGCCCCAAAC
* *
14465087 TTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGT
322 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGT
* *
14465152 GTACAAGATTTTGTGACGATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCA
386 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
14465217 GCAAACCTGTAAAATCTCAAATGTTGTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
451 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * *
14465282 GGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCGCACATTATGTGCGCACACCCCCTCAGCC
516 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC
* * *
14465347 CCCC-GATCG-CTGGAACCCCAATGTCGCCGGTCAGGTTCT-C--CGA------TGA---TGCTC
581 CCCCTGATCGTC-AGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCGTGATGGTGCCC
* *
14465398 CGAC---G----A--T-------G---ATGCCCGAGCCCAGCATGGGCTGCCGCAACCCTCGGTC
645 CGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTC
* * *
14465444 CGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTGGACTGGGAATGAACTCTGTATGCCTA
710 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
14465509 AGTCAACCCACGAAACAAGCGTGCGGGCGTTCAGTCAGCCAAAGGGGCCGGATGCGCAAGCCGGG
775 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * *
14465574 GATCGACCGGGTCCCCCTATACGTGCTGCCAATCCTGCTATCTCAACCCTCAGTTCGAT
840 GATCGGCCGGGTCCCCCTCTGCGTGCTG-----CC-G-----T-AACCCTCAGTTCGAT
* * * * * * *
14465633 CCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCAAACTGACGAAATGAGCGGGCGGGTGG
1 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-AGGCGG
* * * * *
14465698 GTGGGCGGGCACTACGCCGGCCAGAGAGACGAGATGCACAAGCTGTGGATCAATGGGGTGGTAGG
65 GT-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
14465763 TGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTACGGCTTGTAAATTCATAC
129 TGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * * *
14465828 AATGGTCCCTTAAGCCTTCCCGTGAACTTTCATGGCAAGATGACTCGTTTTTTATTTTTCACGAT
194 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * *
14465893 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAACTTTTTTTGGAAGGAGTTTTGGCCCCAAACT
259 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAA-ATTTTTTCGAAGGAGTTTTGGCCCCAAACT
* *
14465958 TGGTAGACATGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
323 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTG
*
14466023 TAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
387 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
14466088 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATTG
452 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* *
14466153 GAGGCCAATATAAGGGCCAAGTACCAGCACCCATAGCACATCATGTGCGCACACCCCCCCGGCCC
517 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC
* *
14466218 CCCCGATCGTC-GAAACCCCAATGCCGTCGGT
582 CCCTGATCGTCAG-AACCCCAATGCCGCCGGT
14466249 AGGATCGACA
Statistics
Matches: 5131, Mismatches: 599, Indels: 369
0.84 0.10 0.06
Matches are distributed among these distances:
851 5 0.00
856 2 0.00
857 1 0.00
858 1 0.00
859 2 0.00
861 2 0.00
862 4 0.00
863 213 0.04
864 3 0.00
865 2 0.00
866 95 0.02
867 72 0.01
869 187 0.04
870 281 0.05
871 231 0.05
872 4 0.00
873 3 0.00
874 2 0.00
875 7 0.00
876 182 0.04
877 379 0.07
878 11 0.00
879 294 0.06
880 294 0.06
881 76 0.01
882 212 0.04
883 339 0.07
884 210 0.04
885 5 0.00
886 104 0.02
887 210 0.04
888 11 0.00
889 11 0.00
890 175 0.03
891 769 0.15
892 167 0.03
893 49 0.01
895 10 0.00
896 235 0.05
897 17 0.00
898 146 0.03
899 74 0.01
900 34 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (886 bp):
CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGCGGG
TGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
TCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGG
TAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCT
GATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCGTGATGGTGCCCCGACGA
AGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCGGTCC
GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
CCGGGTCCCCCTCTGCGTGCTGCCGTAACCCTCAGTTCGAT
Found at i:14461983 original size:26 final size:26
Alignment explanation
Indices: 14461947--14461997 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
14461937 TGGTCTAATC
14461947 TTAGACTGGGAATGAACTCCGTATGG
1 TTAGACTGGGAATGAACTCCGTATGG
14461973 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
14461998 CCTAAGTCAA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.16, G:0.29, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGG
Found at i:14462856 original size:26 final size:26
Alignment explanation
Indices: 14462820--14462878 Score: 95
Period size: 26 Copynumber: 2.3 Consensus size: 26
14462810 CCTCGTCTGG
14462820 TCCG-ATG-TTAGACTGGGAATGAAC
1 TCCGTATGCTTAGACTGGGAATGAAC
*
14462844 TCTGTATGCTTAGACTGGGAATGAAC
1 TCCGTATGCTTAGACTGGGAATGAAC
14462870 TCCGTATGC
1 TCCGTATGC
14462879 CTAAGTCAAC
Statistics
Matches: 31, Mismatches: 2, Indels: 2
0.89 0.06 0.06
Matches are distributed among these distances:
24 3 0.10
25 3 0.10
26 25 0.81
ACGTcount: A:0.25, C:0.19, G:0.27, T:0.29
Consensus pattern (26 bp):
TCCGTATGCTTAGACTGGGAATGAAC
Found at i:14463763 original size:26 final size:26
Alignment explanation
Indices: 14463713--14463765 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14463703 CCGATCCGAT
* **
14463713 CTTAGATTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14463739 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14463765 C
1 C
14463766 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Done.