Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168048.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_3, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33276047
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Warning! 139000 characters in sequence are not A, C, G, or T
File 91 of 190
Found at i:14464619 original size:26 final size:26
Alignment explanation
Indices: 14464590--14464642 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14464580 CCGATCCGAT
14464590 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14464616 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14464642 C
1 C
14464643 CTAATTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14466775 original size:26 final size:26
Alignment explanation
Indices: 14466745--14466797 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14466735 GTTGACTTAG
*
14466745 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
14466771 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
14466797 G
1 G
14466798 ATTGGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:14468519 original size:26 final size:26
Alignment explanation
Indices: 14468489--14468541 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14468479 GTTGACTTAG
14468489 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
14468515 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14468541 G
1 G
14468542 ATCAAACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:14469423 original size:26 final size:26
Alignment explanation
Indices: 14469393--14469445 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14469383 GTTGACTTAG
*
14469393 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
14469419 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
14469445 G
1 G
14469446 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:14469981 original size:905 final size:901
Alignment explanation
Indices: 14467919--14471058 Score: 4416
Period size: 905 Copynumber: 3.5 Consensus size: 901
14467909 TCACACCCCC
* *
14467919 TTAAAGTGTCTGCAATGGAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
1 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* *
14467984 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCATGTTTGGGGCTAA
66 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
14468049 AACCCCTTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCTAAAATCGTGAAAAAA
131 AACTCC-TTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAAT
* * * *
14468114 AGAAAACAAGTCGTCTTTCCATGAAACTTCATGTGAAGGCTTAAGGGACCGTTGTATGAATTTAA
195 AGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* * *
14468179 AAGCCATAAAAATGGCATCGGCACGCAAAAATATGAAGATGTGCCTAAACCC-CCTACCACGCTA
260 AAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* **
14468243 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGTCTGCCCGCCCAC
325 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGTCTGCCCG-CCTG
** * *
14468308 TCTTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-TGAACCAGACTGAG
389 TAGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACTGAG
* * * *
14468372 GGTTACGGCAGTAGGATTGGCAGCACGTAGAGGGGGACCCGACCGATCCCCCGGCTTGCACATCC
453 GGTTACGGCAGCAGGATTGGCAGCACGTAGAGGGGGACCCGGCCGATCCCCTGGCTTGCGCATCC
* * * * *
14468437 CGCCCCTCTGGCCTAC-AGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACAGAGTT
518 CACCCCTCTGGTCGACTA-AGCGCCCACACGCTCGTTTCATGGGTTGACTTAGGCATAC-GAGTT
* * *
14468501 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAAACTGGACCAAGGGTT-CTG
581 CATT-CCAGTCTAAGCATA-GGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGC-G
**
14468565 GCAGCACATGCTGGGCTCGGGCATGTGCCCGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCG
643 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCG
* * ** * *
14468630 GAGCATCGTCGAAGAACCTGACTGGTGACATTGGGGTTCTGGCGATCGGGAGGGCCGGGGGGCTG
708 GAGCATCGTCGGAGAACCTGACAGACGGCATTGGGGTTCTGGCGATCGGGAGGGCCGGGGGGGTG
* * * *
14468695 TGCACACATGATGTGTGATGGGTGTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTGATTAA
773 TGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* ** *
14468760 ACCTTGGGAACTCACACTTCCTTAAAGAGCATTTGAGATTTTCCAGGTTTGCTGCCAGTAGCCA
838 ACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
14468824 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTT
1 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
*
14468889 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAGGTTTGGGGCCAA
66 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * **
14468954 AACTCCTTCTGAAAAAATTATAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATA
131 AACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATA
*
14469019 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
196 GAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* * *
14469084 GGCCATAAAAATGGCGTTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
261 AGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
** * * *
14469149 TAATCCACGGCTTGCGCATCCCATCTCTCTGGCCGACGTAGTGCCCGCCTGTCTGCCCGTTCTGT
326 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGTCTGCCCG-CCTGT
* * *
14469214 AGTTTCGTCAGTTGGCTTAGGCATACGGTGTTCATTCCCAGTGTAAGATCAGACCAGACTGAGGG
390 AGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGG
*** * * * *
14469279 TTACGATGGCAGGATTGGCGGCACGTAGAGGGGGACCTGGCCGAT-CCTTGGCTTGTGCATCCCA
455 TTACGGCAGCAGGATTGGCAGCACGTAGAGGGGGACCCGGCCGATCCCCTGGCTTGCGCATCCCA
14469343 CCCCTCTGGTCGACTAAGCGCCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCAT
520 CCCCTCTGGTCGACTAAGCGCCCACACGCTCGTTTCATGGGTTGACTTAGGCATAC-GAGTTCAT
* *
14469408 TCCTAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGTTTGCGGCAG
584 TCC-AGTCTAAGCATA-GGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAG
* * *
14469473 CACATGCTGGGCTTGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCCTCGGAGC
647 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGC
* * *
14469538 ATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCTGGCAATCGGGAGGGTCGGGGGGGTGTGCA
712 ATCGTCGGAGAACCTGACAGACGGCATTGGGGTTCTGGCGATCGGGAGGGCCGGGGGGGTGTGCA
* *
14469603 CACATGATGTGCGATGGGTGCTGGAACTTGGCCCTTGTATTGGCCCCCTATCCCTCATCAAACCT
777 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* * * *
14469668 TGAGAAATCACACCCCCTTAAAGAGCACTTGAAATTTTATAGGTTTGCTGCCAGTAGCCA
842 TGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
14469728 TTAAAGTGTCTAAAATGGGGACACTTTTTTCAAAATGGTCACAAAATCTTGTACACTTCGAATTT
1 TTAAAGTGTCTGAAATGGGGACACTTTTTTC-AAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * *
14469793 TTAGCTAAATTTTTTTGTCCATGCCAACAAAAATACAAGGATCACGTCTACCAATTTTGGGGCCA
65 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* * * *
14469858 AAACTCCTTCTGAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCGTCAAAAAT
130 AAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAAT
*
14469923 AGAAAACAAGTCGTCCTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
195 AGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* *
14469988 AGGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
260 AAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * *
14470053 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTC-AGCGTAATG-CC-CCC--CAGCCCG-C--
325 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGTCTGCCCGCCTG
* * * **
14470110 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTGAGATCCA-A-CTGAACCAA
389 TAGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-CAGACCAG-ACTGA
* * *
14470173 GGGTTACGGCAGCAAGA-TAGCAGCACGCAGAGGGGGACCCGGCCGATCCCCT-GCTTGCGCATC
452 GGGTTACGGCAGCAGGATTGGCAGCACGTAGAGGGGGACCCGGCCGATCCCCTGGCTTGCGCATC
* *
14470236 CCACCCCTCTAGTCGACTGAGCG--CACACGCTCGTTTCATGGGTTGAC-T-----TA-G-G---
517 CCACCCCTCTGGTCGACTAAGCGCCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGAGTTC
14470288 ----CA---T-A-C---GGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAG
582 ATTCCAGTCTAAGCATAGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAG
** *
14470341 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCAGGGCACCATCGTCGGAGC
647 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGC
* **** *
14470406 ATCGTCGGTGAACCTGACAGAC-GCATTGGGGTTCCAATGATCGGG-GAGCCGGGGGGTGTGTG-
712 ATCGTCGGAGAACCTGACAGACGGCATTGGGGTTCTGGCGATCGGGAGGGCCGGGGGG-GTGTGC
*
14470468 -CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCGTCAAACC
776 ACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
** *
14470532 TCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCA
841 TTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
14470593 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
1 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* *
14470658 TAGCTGAATTGTTTTGTGCATGCCAACAAAAATAC-AGCGATCAGGTCTACCAAGTTTGGGGCCA
66 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAG-GATCACGTCTACCAAGTTTGGGGCCA
* * *
14470722 AAACTCCTTCCGAAAAAA-TTTAAAAAATTCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAA
130 AAACTCCTTCCGAAAAAATTTTAAAAAA-TCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAA
* * * *
14470786 GAGAAAACGAGTCGTCTTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTGTGAATTTA
194 TAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * *
14470851 CAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAATCCACCTACCACCTT
259 CAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * *
14470916 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGTCCGCCTG
324 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGTCTGCCCGCCTG
* * * * * *
14470981 CTCA-TTTCGTCTGTTGGCTTTGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACGGA
389 -T-AGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGA
*
14471045 GTGTTACGGCAGCA
452 GGGTTACGGCAGCA
14471059 CATGCTGGGC
Statistics
Matches: 2016, Mismatches: 194, Indels: 83
0.88 0.08 0.04
Matches are distributed among these distances:
863 11 0.01
864 299 0.15
865 148 0.07
866 12 0.01
867 23 0.01
868 130 0.06
869 1 0.00
871 1 0.00
872 62 0.03
873 3 0.00
874 1 0.00
877 1 0.00
878 1 0.00
885 1 0.00
886 1 0.00
888 2 0.00
893 1 0.00
894 24 0.01
896 59 0.03
897 65 0.03
898 2 0.00
899 1 0.00
901 6 0.00
903 4 0.00
904 547 0.27
905 609 0.30
906 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (901 bp):
TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
AACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATA
GAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
AGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGTCTGCCCGCCTGTA
GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGT
TACGGCAGCAGGATTGGCAGCACGTAGAGGGGGACCCGGCCGATCCCCTGGCTTGCGCATCCCAC
CCCTCTGGTCGACTAAGCGCCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGAGTTCATTC
CAGTCTAAGCATAGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACA
TGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG
TCGGAGAACCTGACAGACGGCATTGGGGTTCTGGCGATCGGGAGGGCCGGGGGGGTGTGCACACA
TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAG
AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
Found at i:14471668 original size:726 final size:716
Alignment explanation
Indices: 14470263--14471786 Score: 2292
Period size: 726 Copynumber: 2.1 Consensus size: 716
14470253 TGAGCGCACA
* * * *
14470263 CGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCG
1 CGCTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * *
14470328 AGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCAGGGCA
66 AGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCACCAGGGCA
* *
14470393 CCATCGTCGGAGCATCGTCGGTGAACCTGACAGACGCATTGGGGTTCCAATGATCGGGGAGCCGG
131 CCATCGTCGGAGCATCGTCGGTGAACCTGACAGACGCATTAGGGTTCCAACGATCGGGGAGCCGG
*
14470458 GGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCT
196 GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCT
*
14470523 CGTCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGT
261 CATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGT
* * * *
14470588 AGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
326 AGCCATTAAAGTGTCTAAAATAGGGAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAA
* **
14470653 GTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAGCGATCAGGTCTACCAAGTTTGGG
391 GTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAACGATCACATCTACCAAGTTTGGG
14470718 GCCAAAACTCCTTCCGAAAAAATTTAAAAAATTCTCGAACCGTAAAAAGTTTCAAAAATCATGAA
456 GCCAAAACTCCTTCCGAAAAAATTTAAAAAATTCTCGAACCGTAAAAAGTTTCAAAAATCATGAA
* * *
14470783 AAAGAGAAAACGAGTCGTCTTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTGTGAAT
521 AAAGAGAAAACGAGTCGCCTTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATAAAT
** * *
14470848 TTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAATCCACCTACCAC
586 TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATAAAGATGTGCCTAAACCCACCTACCAC
* * *
14470913 CTTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC-GACGTAGTGCCCGCCCGCCCGTC-C
651 CCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG-CGTAGTGCCCGCCCACCCG-CAC
14470976 GC-
714 GCT
* * * * *
14470978 CTGCTCATTTCGTCTGTTGGCTTTGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACG
1 C-GCTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
* * *
14471043 GAGTGTTACGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGC
65 GAGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCACCAGGGC
* * *
14471108 ACCATCGAT-GGAGCATCGTCAGAGCATCGTGGAGAACTTGACCAG-CGGCATTAGGGTTTCGAC
130 ACCATCG-TCGGAGCATCGTC---G----GT---GAACCTGA-CAGAC-GCATTAGGGTTCCAAC
*
14471171 GATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATGA
182 GATC-GGGGAGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT-A
* * *
14471236 -TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGTATTTGAGATTTTA
245 TTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTA
14471299 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATAGGGAAAC-TTTTTCAAATGGTCACAAA
310 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATAGGGAAACTTTTTTCAAATGGTCACAAA
* *
14471363 ATCTTGTGCACTTCAAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAATGATCAC
375 ATCTTGTACACTTCAAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAACGATCAC
* *
14471428 ATCTACCAAGTTTGGGGCCAAAACTCTTTCTGAAAAAATTTTAAAAAA-TCTCGAACCGTAAAAA
440 ATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTAAAAAATTCTCGAACCGTAAAAA
* * * *
14471492 GTTTCCAAAATCATGAAAAATAGAAAATGAGTCGCCTTGCCATGAAACTTCACGTGAAGGCTTAA
504 GTTTCAAAAATCATGAAAAAGAGAAAACGAGTCGCCTTGCAATGAAACTTCACGTGAAGGCTTAA
*
14471557 GGGACCATTGTATAAATTTATAAGCCATAAAAATGGCATTGGCACACAGAAATATAAAGATGTGC
569 GGGACCATTGTATAAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATAAAGATGTGC
*
14471622 CTAAACCCACCTACCACCCTATTAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTG
634 CTAAACCCACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTG
14471687 CCCGCCCACCCGCACGCT
699 CCCGCCCACCCGCACGCT
* * **
14471705 CGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACTAGACCG
1 CGCTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
*
14471770 AGGGTTACGGCAACACA
66 AGGGTTACGGCAGCACA
14471787 CTGAGGGGGA
Statistics
Matches: 725, Mismatches: 64, Indels: 29
0.89 0.08 0.04
Matches are distributed among these distances:
715 1 0.00
716 131 0.18
717 1 0.00
719 1 0.00
723 2 0.00
725 1 0.00
726 400 0.55
727 96 0.13
728 91 0.13
729 1 0.00
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (716 bp):
CGCTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
AGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCACCAGGGCA
CCATCGTCGGAGCATCGTCGGTGAACCTGACAGACGCATTAGGGTTCCAACGATCGGGGAGCCGG
GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCT
CATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGT
AGCCATTAAAGTGTCTAAAATAGGGAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAA
GTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAACGATCACATCTACCAAGTTTGGG
GCCAAAACTCCTTCCGAAAAAATTTAAAAAATTCTCGAACCGTAAAAAGTTTCAAAAATCATGAA
AAAGAGAAAACGAGTCGCCTTGCAATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATAAAT
TTACAAGCCATAAAAATGGCATTGGCACACAGAAATATAAAGATGTGCCTAAACCCACCTACCAC
CCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCCACCCGCACGC
T
Found at i:14472819 original size:26 final size:26
Alignment explanation
Indices: 14472783--14472835 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14472773 GTTGACCTAG
*
14472783 GCATAGGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
14472809 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
14472835 G
1 G
14472836 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:14472875 original size:907 final size:900
Alignment explanation
Indices: 14471003--14476229 Score: 6241
Period size: 891 Copynumber: 5.8 Consensus size: 900
14470993 GTTGGCTTTG
* * *
14471003 GCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACGGAGTGTTACGGCAGCACATGCTGGG
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* *
14471068 CTCAGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGATGGAGCATCGTCAGAGC
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCG-TGGAGCA---TC---G-
* *
14471133 ATCGTGGAGAACTTGACC-AGCGGCATTAGGGTT-TCGACGATCGGGGGGGCCGGGGGGTGTGCG
123 -TC--GGAGAACCTGACCGA-CGGCATTGGGGTTCT-GACGATC-GGGGGGCCGGGGGGTGTGCG
14471196 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATGA-TGGCCCCCTATCCCTCATCAAACC
182 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT-ATTGGCCCCCTATCCCTCATCAAACC
*
14471260 TCGAGAACTCACA-CCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
246 TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* * * * *
14471324 AGTGTCTAAAATAGGGAAAC-TTTTTCAAATGGTCACAAAATCTTGTGCACTTCAAGTTTTTAGC
311 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * *
14471388 TGAATTGTTTTGTGCATGCCAACAAAAATACAATGATCACATCTACCAAGTTTGGGGCCAAAACT
376 TGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
**
14471453 CTTTCTGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCCAAAATCATGAAAAATAGAAA
441 CTTTC-GAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCATGAAAAATAGAAA
* * * *
14471518 ATGAGTCGCCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATAAATTTATAAGCC
505 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
** * **
14471583 ATAAAAATGGCATTGGCACACAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATTAAT
570 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * *
14471648 CCACGGCTTGCGCATCCCGTCTCTCTGGCC-AGCGTAGTGCCCGCCCACCCGCACGCTCGCTCGT
635 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGT
* * * *
14471712 TTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-TG---G-ACT--A-G--A
699 TTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAAGGTTG
* * * * * *
14471767 CCG-AG--GGTTACGGCAACACACTGAGGGGGACCCG-GTCGATCCCCGGCTTGCGTATCCCGCC
764 CGGCAGCAGGAT-CGGCAGCACACAGAGGGGGACCCGACT-GATCCCCGGCTTGCGCATCCCGCC
* *
14471828 CCTCTGGCCGG-TCGAGTGCCCGCACGCTCATTTCATGGGTTGACCTAGGCATAGGGAGTTCATT
827 CCTCTGGCCGGCT-GAGCGCCCGCACGCTCATTTCGTGGGTTGACCTAGGCATAGGGAGTTCATT
14471892 CCCAGTCTAA
891 CCCAGTCTAA
* * * *
14471902 GCATACAGAGTTCATTCCCAATCTAAGATCAGACTGGACCGAGGGTTATGGCAGCACATACTGGG
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* * *
14471967 CTCGGGCATGTGCTAGTGCCGCATTCTTCTTCGTCGGGGCACCATCGTTGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCG-TGGAGCATCGTCGGAGA
* * * *** * * *
14472032 ACCTGATCGACGGCATTGGGGTTCTGGCGAGCGGAGGGTTTGGTGGGTGTGTGTACATGATGTGC
130 ACCTGACCGACGGCATTGGGGTTCTGACGATCGG-GGGGCCGGGGGGTGTGCGCACATGATGTGC
* * * * *
14472097 GTTGGGTGCTGGTACTCGGCCCTTATATTGGCCCCCTATCTCTCATCAAACCTTGAGAAGTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* ** * * * *
14472162 GCATCTTAAAAAGCATTTGAGATTCTACACGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAGTG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
14472227 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTTGCTCAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
14472292 GCATGCCAACAAAAATACAAGGATCATGGCAACCAAGTTTGGGGCCAAAACTCTTTTCGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC-TTTCGAAAAAA
*
14472357 TTTTAAAAAATCTCGAAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTT
453 TTTTAAAAAATCTCG-AACCGTAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* * * * * **
14472422 GCCATTAAACTTCACGTGAAGGCTTTACGGACCGTTATATGAATTTACAAGATATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* ** *
14472487 TTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAACTTACG
582 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * *
14472552 CATCCCGTCTCTTTGGTCGACGTAGTGCCTGCCCGCTCGCCCGCCCACCCGCTCGTTTTGTCAGT
647 CATCCCGTCTCTCTGGCCGACGTA--G--TGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGT
* * * *
14472617 TGGCTTATGCATACAGAGTTCATTCCCAGTCGAAGATC-GACCGAACTGAGGGTTGCAGCAGCAG
708 TGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAAGGTTGCGGCAGCAG
* * * *
14472681 GATCGGCAGCACACAGAGGGGGACCCGGCTGATCCTCGGCTTGTGCATCCTGCCCCTCTGGCCGG
773 GATCGGCAGCACACAGAGGGGGACCCGACTGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * *
14472746 CTGAACGCCCGCACGCTCGTATCGTGGGTTGACCTAGGCATAGGGAGTTCATTCCCAGTCTAA
838 CTGAGCGCCCGCACGCTCATTTCGTGGGTTGACCTAGGCATAGGGAGTTCATTCCCAGTCTAA
* * **
14472809 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* ** ** *
14472874 CTCGGGCATGTGTTGGTATCACATTTTTCTTCACCGAGGCACCATC-----G---C--CGGAGAA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTGGAGCATCGTCGGAGAA
* * * ** **
14472929 CCTGACCGACGACATTAGGGTTCCGACGATCGGGGGGGCCAAGGGGTGTGCGCACATGATGTTTG
131 CCTGACCGACGGCATTGGGGTTCTGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
*
14472994 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAAACCTCGAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
14473059 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
14473124 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAATTTTTTAGCTGAATTTTTTTATG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
14473189 CATGCCAACAAAAATCCAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CTTTCGAAAAAAT
* * * *
14473254 TTTAAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
454 TTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
* *
14473319 CATGAAACTTCACGTGAAGGCTTAAGGGACTATTGTATGAATTTACAAGCCACAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* *
14473384 GGTATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
584 GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
** * * * * *
14473449 TCCCGTCTCTCTGGCCGGTGTAGGGCCTGCCCGCCCGTCCGCCTGCTTGTTTCGTCGGTTGGCTT
649 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * * * **
14473514 AGGCATACAAAGTTCATTCTCAGTCTAAGATCAGACCGAA-TCGAGGGTTGTGATAGCAGGATCG
714 AGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGAACT-GAAGGTTGCGGCAGCAGGATCG
* * * * * * * * *
14473578 GCAGCACGCAGAGCGGGACCCGACCGATCCCCGGCTTGCACATCCCACCCTTTTGGTCGGTTGAG
778 GCAGCACACAGAGGGGGACCCGACTGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * * * **
14473643 CGCCTGCACGCTTATTTCATGGGTTGACTTACGCATACAGAGTTCATTCCCAGTCTAA
843 CGCCCGCACGCTCATTTCGTGGGTTGACCTAGGCATAGGGAGTTCATTCCCAGTCTAA
* * * * * * *
14473701 GCATACGGAGTTCATTCCCAGTCTAAGATCAAACCGGACCAAGGGTTGCAGCAGCTCATGCTCGG
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* ** * * *
14473766 CTCGGGCATGTGCTGGTACGGCTTTTTTCTTTGTCGGGGCACCATC-----G---C--CAGAGAA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTGGAGCATCGTCGGAGAA
* * * * * *
14473821 CCTGACCGGCGGTATTGGGGTTCCGGCGATCAGAGGGG-CAGGGGGTGTGCGCACATGATGTGCG
131 CCTGACCGACGGCATTGGGGTTCTGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * *
14473885 ATGGGTGCTAGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
14473950 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
14474015 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGGTTTTAGCTGAATGTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
14474080 CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTGCTTTCGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CTTTCGAAAAAAT
* * *
14474145 TTTAAAAAATCTCGAGCCATAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTAGTCTTGC
454 TTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
* * *
14474210 CCTGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCTTT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * * * * *
14474275 GGCATGCAGAAATATGTAGATGTCCCAAAACACA-CTACCACCCTATCGATCCAGGGCTTACGCA
584 GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * * *
14474339 TCCCGTCTCTCTGGCCAACGTAGTGCCCGTCTGTCCGCCCGCCCGCTCGTTTCGTTGGTTGGCTT
649 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* ** * ** *
14474404 AGGCATACGGAGTTCATTCCCTAGTCTAAGATCAGACCGAACCAAAGGTTACGGCATTAGGATTG
714 AGGCATACAGAGTTCATTCCC-AGTCTAAGATCAGACCGAACTGAAGGTTGCGGCAGCAGGATCG
* * ** * * *
14474469 GCAGCACGCAGAAGGGGACCCGACCAATCCTCAGCTTACGCATCCCGCCCCTCTGGCCGGCTGAG
778 GCAGCACACAGAGGGGGACCCGACTGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
*
14474534 CGCCTGCACGCTCATTTCGTGGGTTGACTTAAGCATTCATAGTTCATTCGCAGTCTAAGCATATG
843 CGCCCGCACGCTCATTTCGTGGGTTG-----A-C---C-TAG-------GCA---T-AG-----G
14474599 GAGTTCATTCCCAGTCTAA
882 GAGTTCATTCCCAGTCTAA
* * * * * * *
14474618 GCATACGGAGTTCATTTCCAGTCTAAGAT-TGAATCAGACCGAGGGTTACAGCAGCACATGCTAG
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAG-ACCGGACCGAGGGTTACGGCAGCACATGCTGG
* * * *
14474682 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG-CTAGGGCACCATCGCTAGAGCATCGTCGGT
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGGCACCATCG-TGGAGCATCGTCGGA
* * * * * *
14474746 GAACCTGACAGACGGCATTGGGGTTTTGATGATCGGGGAGTCGGGGGGTGTGTGCACATGATGTG
128 GAACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTG
*
14474811 CGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
14474876 ACCCCCTTAAAGAGCATTTGATATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * * *
14474941 GGGCACACTTTTTTCAAATGGTCAC--AATCTTGTAAACTTTGATTTTTTAGCTGAAGTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* ** *
14475004 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTACCAAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CTTTCGAAAAA
* * *
14475069 ATTTTAAAAAATCTCGAA-CGACAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCT
452 ATTTTAAAAAATCTCGAACCG-TAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* *
14475133 TGCCATGAAACTTCTCGTGAAGGCTTAAGGGACCATTGCATGAATTTACAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
14475198 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
581 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
*** * * * *
14475263 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCATTCACCCGTTCGTTTTGTCGATTGG
646 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* * * *
14475328 CTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGATC-AGACCGAAGGTTGCGGCAGCAAGA
711 CTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACTGAAGGTTGCGGCAGCAGGA
** * *
14475392 TCGATAGCACGTAGCACACAGAGGGGGACTTGACTGATCCCCGACTTGCGCATCCCACCCCTCTG
775 TCG---G--C--AGCACACAGAGGGGGACCCGACTGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * * * * *
14475457 GTCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAAGTATACGGAGATCATTCCCAGTC
833 GCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACCTAGGCATAGGGAGTTCATTCCCAGTC
14475522 TAA
898 TAA
* * * *
14475525 GCATACAGAGTTCATTCCTAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
* * * ** * *
14475590 ATCGGGAATGTGCTGGTGCTACATTTTTCTTCGTCGGGGCACCATCACCGGACCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATC-GTGGAGCATCGTCGGAGA
* * * * * *
14475655 ACCTGACCGATGACATTGGGGTT-TCGACGATCGGGGGGCCGGGGGGTGTGTGGACATAATGTGT
130 ACCTGACCGACGGCATTGGGGTTCT-GACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
14475719 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATACCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
14475784 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
14475849 GAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAATTTTTTTGG
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
14475914 GCATGCCAACAAAAATACAAGCATCACGTCT----A---T-----C--AA-------G------T
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTCGAAAAAAT
* * * * * *
14475952 TTT----TACCT-GAACCGCAAAAA-TTTTCAAAAATCATGAAAAATAAAAAATGAGTTGTCTTG
454 TTTAAAAAATCTCGAACCGTAAAAAGTTTT-AAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* * * *
14476011 CCATGAGACTTCATGTGAAGGCTTAAGGGACCATTGCATGAATTTACAAGCCATAAAATTGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
*
14476076 TGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
583 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * ** *
14476141 ATCCCGTCTTTCTAGCTGACATAGT--------GCCCGCCTACCCGCTCGTTTCATCGGTTGGCT
648 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
14476198 TAGGCATAC-GAAGTTCATTCCCAGTCTAAGAT
713 TAGGCATACAG-AGTTCATTCCCAGTCTAAGAT
14476230 TGGACCAGAT
Statistics
Matches: 3751, Mismatches: 484, Indels: 217
0.84 0.11 0.05
Matches are distributed among these distances:
867 1 0.00
868 54 0.01
875 3 0.00
876 187 0.05
877 5 0.00
881 4 0.00
888 3 0.00
889 110 0.03
890 162 0.04
891 710 0.19
892 440 0.12
893 3 0.00
894 1 0.00
895 187 0.05
896 367 0.10
897 5 0.00
898 1 0.00
899 108 0.03
900 3 0.00
901 3 0.00
902 1 0.00
903 1 0.00
905 3 0.00
906 3 0.00
907 530 0.14
908 10 0.00
909 62 0.02
911 1 0.00
912 2 0.00
913 1 0.00
916 3 0.00
917 113 0.03
923 3 0.00
925 2 0.00
926 275 0.07
927 106 0.03
928 201 0.05
929 1 0.00
931 1 0.00
933 75 0.02
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (900 bp):
GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTGGAGCATCGTCGGAGAA
CCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTCGAAAAAATTT
TAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
CCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAAGGTTGCGGCAGCAGGATCGGCA
GCACACAGAGGGGGACCCGACTGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
CCGCACGCTCATTTCGTGGGTTGACCTAGGCATAGGGAGTTCATTCCCAGTCTAA
Found at i:14473705 original size:26 final size:26
Alignment explanation
Indices: 14473675--14473727 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14473665 GTTGACTTAC
14473675 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
14473701 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
14473727 G
1 G
14473728 ATCAAACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:14474592 original size:26 final size:25
Alignment explanation
Indices: 14474563--14474644 Score: 78
Period size: 26 Copynumber: 3.2 Consensus size: 25
14474553 TGGGTTGACT
14474563 TAAGCATTCATAGTTCATTCGCAGTC
1 TAAGCATTCATAGTTCATTC-CAGTC
14474589 TAAGCA-T-ATGGAGTTCATTCCCAGTC
1 TAAGCATTCAT--AGTTCATT-CCAGTC
* **
14474615 TAAGCATACGGAGTTCATTTCCAGTC
1 TAAGCATTCATAGTTCA-TTCCAGTC
14474641 TAAG
1 TAAG
14474645 ATTGAATCAG
Statistics
Matches: 47, Mismatches: 3, Indels: 12
0.76 0.05 0.19
Matches are distributed among these distances:
24 2 0.04
25 1 0.02
26 41 0.87
27 3 0.06
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.32
Consensus pattern (25 bp):
TAAGCATTCATAGTTCATTCCAGTC
Found at i:14475539 original size:26 final size:26
Alignment explanation
Indices: 14475496--14475551 Score: 76
Period size: 26 Copynumber: 2.2 Consensus size: 26
14475486 TGGGTTGACT
* *
14475496 TAAGTATACGGAGATCATTCCCAGTC
1 TAAGCATACAGAGATCATTCCCAGTC
* *
14475522 TAAGCATACAGAGTTCATTCCTAGTC
1 TAAGCATACAGAGATCATTCCCAGTC
14475548 TAAG
1 TAAG
14475552 ATCAGACCGA
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.21, G:0.18, T:0.29
Consensus pattern (26 bp):
TAAGCATACAGAGATCATTCCCAGTC
Found at i:14478539 original size:14 final size:14
Alignment explanation
Indices: 14478512--14478545 Score: 50
Period size: 14 Copynumber: 2.4 Consensus size: 14
14478502 TCAAGTTCTC
*
14478512 TGATGATGCTCCGA
1 TGATGATGCCCCGA
*
14478526 TGATGGTGCCCCGA
1 TGATGATGCCCCGA
14478540 TGATGA
1 TGATGA
14478546 AAAATGCAGC
Statistics
Matches: 17, Mismatches: 3, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
14 17 1.00
ACGTcount: A:0.21, C:0.21, G:0.32, T:0.26
Consensus pattern (14 bp):
TGATGATGCCCCGA
Found at i:14480316 original size:880 final size:875
Alignment explanation
Indices: 14477958--14481117 Score: 3974
Period size: 905 Copynumber: 3.6 Consensus size: 875
14477948 NNNNNNNNNN
* * *
14477958 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGT-GGTTTAAGA
1 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTT-AGG
** *
14478022 CAACATCTTTCATATTTCTGGGTGTGCCAATGCCACTTTTGTATGGCTTGTAAATTCATACAAAG
65 C-ACATC-TTCATATTTCTGCAT-TGCCAATGCCA-TTTT-TATGGCTTGTAAATTCATACAATG
* * *
14478087 CGTCCCTTAAG-CTT-ACGTGAAGGTTCATGGTAAGACGACTCGTTTTTTATTTTTCACGATTTT
125 -GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
14478150 CAAAACTTTTGT--GGTTC-AGGA-TTTTTAAAATTTTTTCGGAAGGAG-TTTGGCCCCAAACTC
189 CAAAACTTTT-TACGGTTCGA-GATTTTTTAAAATTTTTTC-AAAAGAGTTTTGGACCCAAACTT
* *
14478210 GGTAGAC-TGATCGTTGTATTTTTGTTGGCATGCACAAGAAAAATTCAGCTAAAAACTCAAAGTG
251 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAA-AAAAATTCAGCTAAAAACTCAAAGTG
* *
14478274 TACAAGATTTTGTTGA-CATTTGAGAAAAGTGTCCCCATTTTAGACACTTTAATGGCTTACTGGC
315 TACAAGATTTTG-TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC-TACTGGC
* * *
14478338 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGTGA--TCTCCAGG-TTGATGAGGCAT
378 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * *
14478400 AGGTGG-CCAATATAAGGGCTTAAGTACAAGCACCCATCGCACATCATGTGTGCACACCCCTTTC
443 AGG-GGCCCAATATAAGGGC-CAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC---C
* * * * * * *
14478464 CCCGGCCCCCTCGATCGTCGAAACCCCAATGTCGTCGTTCAAGTTCTCTGATGATGCTCCGATGA
502 CCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGACGA
* * *
14478529 TGGTGCCCCGATGATGAAAAATGCAGCACCAACACATGCCCGAGCCCAGATGTGCTGTCGTAACC
566 TGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGATGTGCTGTCGTAACC
* ** * * * **
14478594 CTTGGTCCAGTCCGATCTTAGGCTAGGAATGAACTCCGTATGCCTAAGTCAACTAACGAAACGAG
631 CTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* *
14478659 CG-AGCGGGTGTTCAGCCGGCCA-AGGGGCGGGATGCACAAGCCAGGGATCGGTCGGGTCACCCT
696 CGTA-CGGGCGCTCAGCCGGCCAGAGGGGCGGGATG-ACAAGCCAGGGATCGGTCGGGTCACCCT
* * * * *
14478722 CTGCATGCTGTCAATCCTGCTATCGCAACCCTCGGTCTGGTCCAATCTTAGAC-TGGGAATGAAC
759 CTGCGTGCTGCCAATCCTGCTACCGCAACCCTCGGTCCGGTCCTATCTTAG-CTTGGGAATGAAC
*
14478786 TCCGTATGCCTAAGCTAACCGACG--A-A-A-A----GAGCGGGC---GGGCA
823 TCCGTATGCCTAAGCCAACCGACGAAAGAGAGAGGGCGAGCGGGCGGTGGGCA
* *
14478827 CTATGCCGGCCAGAGAGACGGGATGCGTAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGC
1 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* *
14478892 ACATCTTCATATTTCTGCA-TGCCAATGCCATTTTTATGGCTTGTAAATTAATACAATAGTCCCT
66 ACATCTTCATATTTCTGCATTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * * * * **
14478956 TAAGCCTTCACATGAATTTTTC-TGGCAAGACGACTTGTTTTTTATTTTACACGATTTTTGAAAC
131 TAAGCCTTCACGTGAA-GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAC
* ** * * *
14479020 TTTTTATGGTTCGAGATTTTTTAAAATTTTTTTGTAAGGAGTTTTGGCCCCAAACTTGGTAGACA
195 TTTTTACGGTTCGAGATTTTTTAAAA-TTTTTTCAAAAGAGTTTTGGACCCAAACTTGGTAGACG
**
14479085 TGATCCTT-T-TTCTTTTTTGGCATGCACAAAAAAATTTGGCTAAAAACTCAAAGTGTACAAGAT
259 TGATCCTTGTATT-TTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
*
14479148 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTG
323 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
14479213 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAA
388 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAA
* * * *
14479278 TATAAGGGCCAAGTACCAGCAACCATTGCACATCATGTGCGCACACCCTCCGGGCCCCCCCGATC
453 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCCCGATC
* * * ** * * *
14479343 GCTGGAACCTCGATGCCACCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGTCCCGACGAAG
517 GCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGATGAAG
14479408 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGTATGTGCTGTCGTAACCCTCGGTCTGGTCTGA
582 AAAAATGCGGCACCAGCACATGCCCGAGCCCAG-ATGTGCTGTCGTAACCCTCGGTCTGGTCTGA
* *
14479473 TCTTAGACTGGGAATGAACTCCGTATTCCTAAGTGAACCCACGAAACGAGCGTACGGGCGCTCAG
646 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
* * * * * *
14479538 CCAGCCAGAGCGGCAGGATGTACAAGCCGGGGATCGGACCGGGTCACCCTCTGCGTGCTGCCGAT
711 CCGGCCAGAGGGGCGGGATG-ACAAGCCAGGGATCGG-TCGGGTCACCCTCTGCGTGCTGCCAAT
* * *
14479603 CCTACTGCCGCAACCCTCGGTCCAGTCCTATCTTAGCTTGGGAATGAACTCCGTATGCCTAAGCC
774 CCTGCTACCGCAACCCTCGGTCCGGTCCTATCTTAGCTTGGGAATGAACTCCGTATGCCTAAGCC
14479668 AACCGACGAAATGAGTAGGAGGGCGAGCGGGCGGGTGGGCA
839 AACCGACGAAA-GAG-A-GAGGGCGAGCGGGC-GGTGGGCA
* * * * *
14479709 CTACGTCGACCAGAGAGACGGGATGCGTAAGCCATGGATCGATAGGCTGATAGGTGGGTTTAGGC
1 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *
14479774 ACATCTTCGTATTTTTGCATT-CCAATGCCATTTTTATGGCTTGTAAATTCATACGATGGTCCCT
66 ACATCTTCATATTTCTGCATTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
14479838 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT
131 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT
*
14479903 TTTTACGGTTCGAGATTTGTTAAAA-TTTTTCAAAAGAGTTTTGGACCCAAACTTGGTAGACGTG
196 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAAAAGAGTTTTGGACCCAAACTTGGTAGACGTG
* * *
14479967 ATCCTTGCATTTTTTTTGGCATGCACAAAAAGATTC-GCCTAAAAACTCGAAGTGTACAAGATTT
261 ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG-CTAAAAACTCAAAGTGTACAAGATTT
* * *
14480031 TGTGACCATTTGAAAAAAGTGTCCCCGTTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATA
325 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
14480096 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GTTTGATGAGGGATAGGGGGCCAATA
390 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATA
* * *
14480160 TAAGGGCCATGCACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCACGCCGATCGC
455 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC-CCCCGATCGC
*
14480225 CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAA
519 CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGATGAAGAA
* * *
14480290 AAATGCGGCACCAGCACATCCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATC
584 AAATGCGGCACCAGCACATGCCCGAGCCCAG-ATGTGCTGTCGTAA-CC-C--T-CG----G---
* *
14480355 TTAAACTGGGAATGAACTCCATATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
636 -T---CT-GG--T---CT---GAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * *
14480420 CGAAATGAGCGTACGGGCGCTCAGTCGGCCAGAGGGGCGGGATGATCAAGTCAAGGATCGGTCGG
687 CGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGA-CAAGCCAGGGATCGGTCGG
* * * * * * *
14480485 GTCCCCCTCTGTGTGCTGCCAATCCTGCTACTGAAACCCTCAGTTCGGT-CTGATCTTAGATTGG
751 GTCACCCTCTGCGTGCTGCCAATCCTGCTACCGCAACCCTCGGTCCGGTCCT-ATCTTAGCTTGG
* *
14480549 GAATGAACTCCGTATGCCTAAGCCAACTGATGAAACGAGCAGATGGGCG-GACGGGCAGGTGGGC
815 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-GAG-AGA-GGGCGAG-CGGGC-GGTGGGC
14480613 A
875 A
* * * ** *
14480614 CTACGTCGGCCAGAGAGACGGGATGCGCAAGACGTGGATCGATAGGGTGGTACATGGGTTTAGCC
1 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGC
*
14480679 ACATCTTCATATTTCTG-TTTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
66 ACATCTTCATATTTCTGCATTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * * *
14480743 TAAGCCTTCATGTGAAGTTGCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTC-AACC
131 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAAC
* * ** *
14480807 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAG-GATTTTCAACCCCAAATTTGGTAGAC
195 TTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAAAAGAG-TTTTGGA-CCCAAACTTGGTAGAC
* * *
14480871 GTGAACCTTGTATTTTTTTTGGAATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
258 GTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
* * *
14480936 TTTGTGACCATTTGAAAAAAGTGTCCTCATTTCATACACATTAATGGCTACTGGCAGCAAACCTG
323 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
14481001 TAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAA
388 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAA
* *
14481066 TATAAGGGCCAAGTGCCAGCACCCATTGCACATCATGTGCGCACACCCCCCC
453 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC
14481118 CGACGATGCC
Statistics
Matches: 2007, Mismatches: 202, Indels: 125
0.86 0.09 0.05
Matches are distributed among these distances:
862 10 0.00
863 114 0.06
864 144 0.07
865 99 0.05
866 183 0.09
867 96 0.05
868 40 0.02
869 54 0.03
870 6 0.00
872 1 0.00
874 1 0.00
878 8 0.00
879 2 0.00
880 219 0.11
881 153 0.08
882 201 0.10
883 1 0.00
884 1 0.00
885 2 0.00
889 1 0.00
893 1 0.00
896 2 0.00
897 2 0.00
899 1 0.00
902 2 0.00
904 7 0.00
905 303 0.15
906 108 0.05
907 173 0.09
908 72 0.04
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (875 bp):
CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGC
ACATCTTCATATTTCTGCATTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACT
TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAAAAGAGTTTTGGACCCAAACTTGGTAGACGTG
ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTT
GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATAT
AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCG
GAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGATGAAGAAAA
ATGCGGCACCAGCACATGCCCGAGCCCAGATGTGCTGTCGTAACCCTCGGTCTGGTCTGATCTTA
GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGC
CAGAGGGGCGGGATGACAAGCCAGGGATCGGTCGGGTCACCCTCTGCGTGCTGCCAATCCTGCTA
CCGCAACCCTCGGTCCGGTCCTATCTTAGCTTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
GAAAGAGAGAGGGCGAGCGGGCGGTGGGCA
Found at i:14481201 original size:26 final size:26
Alignment explanation
Indices: 14481172--14481222 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14481162 GGTCCGAACG
14481172 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
* *
14481198 TAGATTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
14481223 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:14482088 original size:25 final size:26
Alignment explanation
Indices: 14482060--14482111 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14482050 CCGGTCCGAT
*
14482060 CTTAGA-TTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14482085 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14482111 C
1 C
14482112 CTAAGTCAGC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 6 0.24
26 19 0.76
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14483539 original size:871 final size:871
Alignment explanation
Indices: 14481196--14486334 Score: 6251
Period size: 909 Copynumber: 5.8 Consensus size: 871
14481186 ACTCCGTATG
* * * * * *
14481196 CTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACAAGCGTGCTGGCGCTCAGT
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * *
14481261 CGGCCAGAGGGGCAGGATGCGTAAGCCGAGGCTCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGTGTGCTGACGATCC
** * * * *
14481326 TGCTATCGCAACCCTCGATCCGGTCTGATCTTAGACTGAGAATGAACTCTGTATGCCTAAGCCAT
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * * *
14481391 CCGACGAAACGAGCGGGTGGGCCGGTGGGTGGGCACTACGCCAGCCTGAGAGATGGGATGTGCAA
196 CCGACGAAACGAGCGGACGGG-C--T-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14481456 GCCGTGGATCGATTGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCGTGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * * * * *
14481521 TTTTTATGCCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATAAAGTTTCATGGTAAGAT
322 TTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14481586 GACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTCGGGATCTTTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * *
14481651 CGGAAGGAGTTTTGGCCCCAAACTTGGAAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAA
452 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
14481716 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14481781 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
14481846 TTCTCGAGGTTTGATGAAGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATG-AGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
14481910 CATGTGCGCACACCCCCCGGCCCCACGATCGCCGGAACCCCCATGCCGTCGGTCAGG-T-T----
711 CATGTGCGAACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* **
14481969 C--T--T-CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCAAGCCCAGCA
776 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAGCA
*
14482029 TGTGCTGCCGTAACCCTCGGTCCGGTCCGAT
841 TGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
*
14482060 CTTAGATTGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAGCCCA
1 C------T----T--A----G-A----T----TGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * *
14482125 C-AAATCGAGTGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCTGAGGATCGACCG
41 CGAAA-CGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCG
** ** * * * * **
14482189 GGTCCCCCTCTACGTTTTGCCGTTCCTACTGCCGCAACCCTCGGTCCGATCCCATCTTAGACTGG
105 GGTCCCCCTCTGTGTGCTGACGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGG
* * *
14482254 GAATGAACTCCGTATGCCTAAGCCAATCGATGAAACGA---G-CGGGCGGGCGGGCACTACGCCG
170 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCTGGCGGGCACTACGCCG
* * * * *
14482315 GCTAGAGAAACGGGAAGCGCAAGCCATGGATCGATAGGGTGCTAGGTGGGTTTAGGCACATCTTC
235 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
*
14482380 ATATTTCTGTGTGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
300 ATATTTCTGCGTGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * *
14482445 ACGTGAAGTTGCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTC-AACCTTTTTACGG
365 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAACTTTTTACGG
* * *** ** *
14482509 TTCGAGATTTTTTAAAATTTTTTTGAAAGGAGTTTCAACCCCAAACTTCATAGACGTAATCCTTG
429 TTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * * *
14482574 TATTTTTTTTGGAATGCACAAAAAAATTTAGCTAAAAATTGGAAGTGTACAAGATTTTATGACCA
494 TATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * * *
14482639 TTTGAAAAAGGTGTCCCTATTTCAGACACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTTA
559 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * *
14482704 AATGCTTTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGAATAGGGGGCCAACATAAGGGCC
624 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG-ATAGGGGGCCAATATAAGGGCC
* *
14482769 AAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCTCGGCCCCCCGATCACCGGAACCCCA
688 AAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCCCGGCCCCCCGATCGCCGGAACCCCA
* * * * *
14482834 ATACCGCCGGTCAGGTTCTCCAACGACGCTCCGATGATGGTGCCCCGACGAAGAAAAATGCGGCA
753 ATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCA
14482899 CCAACACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
818 CCAACACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
* * * * *
14482953 CTTAGACTGGGAATGAACACCGTATGCCTAAGTCAACCTACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
*
14483018 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCTCCCTCTGTGTGCT-ACGAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGTGTGCTGACG-ATC
* ** * * *
14483082 TTGCTGTTGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGCATGCCCAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
14483147 TCCGACGAAACGAGCGGACGGGCTAGCGGGCACTACGTCGGCCAGAAAGACGAGATGCGTAAGCC
195 ACCGACGAAACGAGCGGACGGGCTGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
14483212 GTGGATCAATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTGTGTGTCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* *
14483277 TAATGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCAAGACGAC
325 TAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * * *
14483342 TTGTTTTTTATTTTACATGATTTTCGAAACTTTTT-CGGTTCGGGATTTTTTAAAATTTTTTCGT
390 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGA
*
14483406 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTTTTGGCATGCACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
*
14483471 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
14483536 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
14483601 TTGAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATG-AGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
14483666 GTGCGAACA-CCCCCGGCCCCTCCGATCGTCGGAACCCCAATGCCATCGATCACGTTCTCCGACG
714 GTGCGAACACCCCCCGGCCCC-CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
* ** * *
14483730 ATACTCCGGTGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAACACATGCATGAGCCCAGCATG
778 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAGCATG
* * *
14483795 TGATGCCGCAACCCTCAGTCCGGTCTGAT
843 TGCTGCCGCAACCCTCGGTCCGGTCCGAT
** * *
14483824 CTTAGATTGGGAAT-AACTCCGTATGCCTAAGTCAACTAACTAAACGAGCGTACGGGAGCTCAGC
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* ** * * * *
14483888 CGGCCAGAGGGGCGGGGTGCAAAAGTCG-GGTATCGGCTGGGTCCCCTTCTGTGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGG-ATCGGCCGGGTCCCCCTCTGTGTGCTGACGATC
* * ** * *
14483952 CTGCTGCCACAACCCTCGGTCCAGTCCAATCTTAGACTAGGAATTAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
*
14484017 ACCGAC-AAA--A-C-GA---GCTGGCGAGCACTACGCCGGCCAGAGAGAC-GGATGCGCAAGCC
195 ACCGACGAAACGAGCGGACGGGCTGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
14484073 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACCTCTTCGTATTTCTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* ** ** *
14484138 TTATGGCTTGTAAATTTGTACAATGGTTGCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGAC
325 TAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14484203 TCGTTTTCAATTTTTCACGATGTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
390 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGA
* * * ** *
14484268 AAGGAGTTTTGGCACCAAACTTGGTAGATGTGATCCTTCTATTTTTGGTGACATGCACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
* * * *
14484333 ATCAGCTAAAAACTCGAAGTGTACATGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14484398 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTGTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
14484463 TCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
650 TCGAGGTTTGATGA-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * **
14484528 GTGAGCACACCCCCTGGGCCCCCCCGATTGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGT
714 GTGCGAACACCCCC-CGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
* * * * * *
14484593 GATTCTCCGACAATGGTGCCTCGACGAAGAAAAAGGTGGCA-CAAGCACATGCCTGAGCCCAGTA
777 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAA-CACATGCCTGAGCCCAGCA
*
14484657 TGTGCTACCGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTAT
841 TGTGCTGCCGCAA-CC-C--TC-G----G-TC-----C---G---G---TCCG-AT
* * * * *
14484713 GCTTAGACTGGGAATGAACTCCGTTTTCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAA
1 -CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
* * * **
14484778 CTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTA-GAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGTGTGCTG-ACGAT
* * *
14484842 CCTACTACCGCAACCCTCGGTCCGGTCTGATCTTAG-CTTGGGAAGGAACTCCGTATGCCTAAGC
129 CCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGAC-TGGGAATGAACTCCGTATGCCTAAGC
* * *
14484906 CAACCGACGAAACGAGTAGGAGGGCGAGCGGGC-GAGCGGGCGCTACGTCGGCCAGAGAGACGGG
193 CAACCGACGAAAC------GAGCG-GA-CGGGCTG-GCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14484970 ATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGCATTC
249 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGC
* * **
14485035 CAATGCCATTTTTATGGCTTGTAAATTCATACGATGGAACCTTAAGCCTTCACGTGAAGTTTCAT
314 CAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
*
14485100 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCAGGATTTTTTAA
379 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAA
* *
14485165 AATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGCATTTTTTTTGGCAT
444 AATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCAT
* *
14485230 GCACAAAAAGATTCGGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
509 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
14485295 CCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGG
574 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* **
14485360 GGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCTTGTACCAGCACCCA
639 GGTGTGAGTTCTCGAGGTTTGATGA-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * *
14485425 TCGCACATCATGTGCGCACACCCCCCCCGGCCAGCCCGATCACCGGAACCCCAATACCGTCGGTC
703 TCGCACATCATGTGCG-A-ACACCCCCCGGCC-CCCCGATCGCCGGAACCCCAATGCCGTCGGTC
* * * * *
14485490 AGGTTCTCTGGCGATGCTCCGACGATGTTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCC
765 AGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCC
** *
14485555 CAAGCCCAGCAAGTGCTGCCGCAACCCTCGGTTTGGTCTGATCTTAAATTGGGAATGAACTCCGT
830 TGAGCCCAGCATGTGCTGCCGCAACCCTC-----GGTC----C---------G---G---TCCG-
14485620 AT
870 AT
**
14485622 GCTTAGATTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
1 -CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
* * ** * ** *
14485687 CCGGCTAGAGGGGTGGGATGATCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCATGCTGTCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGTGTGCTGACGATC
* * * * * *
14485752 TTGCTTCCGGAACCCTCAGTCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAACCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14485817 ACCGACGAAACGAGCAAACGGGCGGTTGGGTGGGCGTGCACTACGCCGGCCAGAGAGACGGGATG
195 ACCGACGAAACGAG----CGGAC-G--GGCT-GGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* * ** *
14485882 CGCAAGACGTGGACCGATAGGGTGGTACATGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAA
252 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
* *
14485947 TGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGCATCGC
317 TGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
** ** * *
14486012 AAGACGACTCGTTTTCTATTTTTCATAATTTTTTAACCTTTTTACGGTTCAGGATTTTTTAAAAT
382 AAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAAT
*** * * *
14486077 TTTTTCGAAAGGAGTTTCAACCCCAAACTTCGTAGACGTAATCCTTGTATTTTTTTTGGAATGCA
447 TTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCA
14486142 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
512 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
14486207 ATTTCAGACACATTAA-GGGTACTGGCAGCAAACCTGTAAAATCTAAAATGCTC-TTAA--GGG-
577 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
14486267 GTGAGTTCTCGAGG-TTGATGAGGATAGGGAGCCAATATAAGGGCCAAGTGCCAG-AACCATCGA
642 GTGAGTTCTCGAGGTTTGATGAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG-
14486330 CACAT
706 CACAT
14486335 TCTGAAGGTG
Statistics
Matches: 3697, Mismatches: 447, Indels: 224
0.85 0.10 0.05
Matches are distributed among these distances:
861 156 0.04
862 306 0.08
863 7 0.00
864 97 0.03
865 8 0.00
866 2 0.00
867 3 0.00
868 168 0.05
869 8 0.00
870 163 0.04
871 414 0.11
872 186 0.05
873 1 0.00
874 3 0.00
876 2 0.00
877 1 0.00
879 1 0.00
880 4 0.00
881 394 0.11
882 96 0.03
883 2 0.00
884 2 0.00
885 5 0.00
886 1 0.00
887 1 0.00
888 7 0.00
889 168 0.05
890 14 0.00
891 151 0.04
892 6 0.00
893 84 0.02
900 1 0.00
901 7 0.00
902 34 0.01
903 14 0.00
904 15 0.00
905 7 0.00
906 3 0.00
907 31 0.01
908 475 0.13
909 639 0.17
910 10 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (871 bp):
CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGTGTGCTGACGATCC
TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGACGGGCTGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
AATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGAACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATG
CTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAGCATGTGC
TGCCGCAACCCTCGGTCCGGTCCGAT
Found at i:14485648 original size:26 final size:26
Alignment explanation
Indices: 14485597--14485649 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14485587 TTGGTCTGAT
*
14485597 CTTAAATTGGGAATGAACTCCGTATG
1 CTTAAATTGGGAATGAACTCCATATG
* *
14485623 CTTAGATTGGGAATGAACTCTATATG
1 CTTAAATTGGGAATGAACTCCATATG
14485649 C
1 C
14485650 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.15, G:0.23, T:0.32
Consensus pattern (26 bp):
CTTAAATTGGGAATGAACTCCATATG
Found at i:14488183 original size:26 final size:26
Alignment explanation
Indices: 14488154--14488204 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
14488144 TCGATCCGAT
* *
14488154 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACCGAGAATGAACTCCGTATG
*
14488180 CTTAGACCGAGAATGAACTCTGTAT
1 CTTAGACCGAGAATGAACTCCGTAT
14488205 ACCTAAGTCA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.20, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACCGAGAATGAACTCCGTATG
Found at i:14488582 original size:902 final size:897
Alignment explanation
Indices: 14486371--14491382 Score: 6260
Period size: 895 Copynumber: 5.7 Consensus size: 897
14486361 TCGGAGGCAT
* * * *
14486371 TGCCCGAGCCCAGCATGTGCTACCGTAACCCTCAGTCCGGTCCGA-CTTAGACT-GGAATGAACT
1 TGCCCGAGCCCAGCATGTGCTATCGCAACCCTCAGTTCGATCCGATCTTAGACTGGGAATGAACT
*
14486434 CCGTAT-CTTAGACTGGG-ATG-ACTCATGCTATG-CTAAGTCACACCCA--TAACGAGCGTGCG
66 CCGTATGCTTAGACTGGGAATGAACTC-TG-TATGCCTAAGTCA-ACCCACGAAACGAGCGTGCG
* * ** **
14486493 GGCGCT-AGTCGG-CAGA--GGCGAGATGCGTAAG-CGAGGATCG-TC-GG-CCCCAGCTGCGT-
128 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTG
* *
14486549 -TGCCGATCCTG-TG-CGCAA-CCTC-GTCCGGT-CGATTTTAGACT-GGAATGAAC-CCGTATG
193 CTGCCGATCCTGCTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
14486606 CCTAAGCCATCCGATGAAACGAGC-C-GGC-GGGCGGCGGACTA---CGGCCAGAGAAACGGGAT
258 CCTAAGCCAACCGACGAAACGAGCGCGGGCGGGGCGG-GCACTACGTCGGCCAGAGAGACGGGAT
* *
14486665 GCGCAAG-CGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCA
322 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCA
*
14486729 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGG
387 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * *
14486794 CAAGACGAATCGTTTTCTATTTTTCATGATTTTTGAAA-TTTTTGCGGTTCGGGATCTTTTAAAA
452 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAA
* * * * *
14486858 CTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTATACGTGATCCTTGTATTTTTGTTGGCATGC
517 TTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGC
* * * * *
14486923 GC-AAAAAATTCAACTAAAAACTAGAAGTGTAAAAGATTTTGTGACCATTTGAAAGAAGTGTCCC
582 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
14486987 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGG
647 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
14487052 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
712 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
14487117 GCACATCAAGTGCGCACACTCCCC-GCCCCCCGATCACCAGAACCCCAATGCCGTCGGTCAGGTT
777 GCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
** * * *
14487181 CTCCGACGATGCTCCGGCGATGGTGCCCTGGCAAAGAAAAATACGACACCAGCACA
842 CTCCGGTGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATACGACACCAGCACA
*
14487237 TGCCCGAGCCCAGCATGTGC--T-G-----C-C-G--C-A----A-C---G-CT-CGAATGAACT
1 TGCCCGAGCCCAGCATGTGCTATCGCAACCCTCAGTTCGATCCGATCTTAGACTGGGAATGAACT
** * * *
14487279 CCGTATGCTTAGACTGGGAATGAACTCCATATGCTTAAGTCAACCCACGAAATGAGCGTGCGGTC
66 CCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * *
14487344 GCTCAGCTGGCCAGAGGGGTGGGATGCGA-AAG-CTAGGGATCGATCGGGTCCCCCTCTGCGTGC
131 GCTCAGCCGGCCAGAGGGGCGGGATGC-ACAAGCCGA-GGATCGATCGGGTCCCCCTCTGCGTGC
* * * * * * * * *
14487407 AGTCGATCTTGTTGCTACAACCCTTAGTTCGGTCCGATCTTAGACTGGGAATGAACTCTGCATGC
194 TGCCGATCCTGCTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
* * *
14487472 CTAAGCCAACTGACAAAACGA--GCGGGC-GGGCGGGCACTACGTCGGCCAGAGAGATGGGATGC
259 CTAAGCCAACCGACGAAACGAGCGCGGGCGGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGC
* * **
14487534 GCAAGCCGTGGATCGATAGGGTGGTAGGTCGGTTTAGGCACATCTTCATTTTTCTTTGTGCCAAT
324 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAAT
*
14487599 GCCATTTTTATGGCTTGTAAATTCATACAATGGT-CCTTAAAGCCTTCACGTGAAGTTGCATGGC
389 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT-AAGCCTTCACGTGAAGTTTCATGGC
* * *
14487663 AAGACGACTCGTTTTCTATTTTTCATAATTTTTGAACCTTTTTTCGGTTCGAGATTTTTTAAAAT
453 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAT
* * *
14487728 TTTTTTGGAAGGTGTTTCGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCA
518 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCA
*
14487792 CAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
583 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
14487857 ATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTATTTAAGGGGGT
648 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
14487922 GTGAGTTCTCGATGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
713 GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
14487987 CACATCATGTGCGCACACCCCCCAGCTCCCCCGATCGCCGGAACCCCACTGTCGCCAGTCAGGTT
778 CACATCATGTGCGCACACCCCCCGGC-CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * *
14488052 CTCCGGTGATGCTTCGACGACGGTGGCCCGGCTAAGAAAAATGCGACACCAGCACA
842 CTCCGGTGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATACGACACCAGCACA
* * * *
14488108 TGCCCGAGCCCAGTATGTGCTGTTGCAACCCTCTGTTCGATCCGATCTTAGACTGGGAATGAACT
1 TGCCCGAGCCCAGCATGTGCTATCGCAACCCTCAGTTCGATCCGATCTTAGACTGGGAATGAACT
* * * * *
14488173 CCGTATGCTTAGACCGAGAATGAACTCTGTATACCTAAGTCAACCCACAAAACGAGCGTGCGGGT
66 CCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * *
14488238 GCTCAGCCGGCCAGAGGGGCGAGATGCATAAGCCGAGGATCGATCGAGTCCCCCTCTGCATGCTG
131 GCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTG
* * * *
14488303 CCTATCCTGCTGCCACAACCCTCGGTCCAGGTCTGATCTTAGACTGGCAATGAACTCCGTATGCC
196 CCGATCCTGCTGCCACAACCCTCAGTCC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
*
14488368 TAAGCCAACCGACGAAACGAGCGACGGGCGGACGAGCAGGCACTACGTCGGCCAGAGAGACGGGA
260 TAAGCCAACCGACGAAACGAGCG-CGGGCGG--G-GCGGGCACTACGTCGGCCAGAGAGACGGGA
** * *
14488433 TGCATAAGCCGTGGATCGCTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
321 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCC
*
14488498 AATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
386 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * * * *
14488563 GCAAGACGATTCCTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGTGATTTTTTACA
451 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAA
* * * *
14488628 ATTTTTTCGGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTATTGGTATG
516 ATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATG
* * * * * *
14488693 CAGAAAACAATTCAGCTAAAAACTTGTAGTGTACAAGGTTTTGTGACCACTTGAAAAAAGTGTCC
581 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
14488758 CCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTTTTTAAGGGG
646 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
14488823 GTGTGAGTTC-CTGAGGTTTGATGAGGGATAGGGGGCTAACATAAGGGCCAAGTACCAGCACCCA
711 GTGTGAGTTCTC-AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * *
14488887 TAGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGACGGAACCCCAAAGCTGCCGGTCAGG
775 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* *
14488952 TTCTCCGGTGATGCTCCGGA-GATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACA
840 TTCTCCGGTGATGCTCC-GACGATGGTGCCCCGGCGAAGAAAAATACGACACCAGCACA
* * *
14489010 TGCTCGAGCCAAGCATGTGCTACCGCAACCCTCAGTT---T--GATC-----C---G-AT---CT
1 TGCCCGAGCCCAGCATGTGCTATCGCAACCCTCAGTTCGATCCGATCTTAGACTGGGAATGAACT
* * * **
14489058 ---T-TG----G-CTGGGAATGAACTCCGTATGCCTGAGTCAACCCATGAAATAAGCGTGCGGGC
66 CCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * * * * *
14489114 GTTCAGCCGGCTAGAGGGGTGGGATGCGCAATCTGGGGATCGATCGAGACCCCTTC-GCGTGCTG
131 GCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTG
* * * * *
14489178 CTGATCCTACT-CCTGCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCC
196 CCGATCCTGCTGCC-ACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * *
14489242 TAAGCCATCCGACTAAACGA--GCGAGC-GGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG
260 TAAGCCAACCGACGAAACGAGCGCGGGCGGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG
*
14489304 CAAGCCGTGGATCGATA-GGTGGTGGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
325 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
*
14489368 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAA
390 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * * *
14489433 GACGACTCGTTTTCTACTTTTCATGA-TTTTCATAACTTTTT-GGGTTCGATATTCTTTAAAATT
455 GACGACTCGTTTTCTATTTTTCATGATTTTTGA-AACTTTTTACGGTTCGAGATTTTTTAAAATT
*
14489496 TTTTTGGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCAC
519 TTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCAC
*
14489561 AAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
584 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
14489626 TTTCATACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGGTCTATAAGGGGGTG
649 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
*
14489691 TGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCGC
714 TGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* ** *
14489756 ACATCATGTGGGCACACCCCCCGGCCCCCCCGATCATCGGAACCCCAATGTCGCCGGTCAGGTTC
779 ACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * *
14489821 TCCGGTGACGCTCCGACGATGGTGCCCCGGTGAAGAAAAATATGACACCAGTACA
843 TCCGGTGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATACGACACCAGCACA
* * * * * **
14489876 TGCCCAAGCCCAACATGTGCTATCGTAACCCTC-GCTCTGGTCTTATCTTAGACTGGGAATGAAC
1 TGCCCGAGCCCAGCATGTGCTATCGCAACCCTCAGTTC-GATCCGATCTTAGACTGGGAATGAAC
* * *
14489940 TCTGTATGCTTAGACTGGGAATGAACTCTGGATGCCTAAGTCAACCCACGAAACGAGTGTGCGGG
65 TCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * *
14490005 CGCTTAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCT
130 CGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCT
* ** * * * *
14490070 GCCGATCCTACTGCCGTAACCCTCGGTCCGGTCCAATCTTAGATTGGGAATGAACTCTGTATGCC
195 GCCGATCCTGCTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* ** ** * *
14490135 TAAGCCAACCGACGAAATGA--GCGGATGGGGC-GGCACTTGGCCGGCCAGACAGACGGGATGCG
260 TAAGCCAACCGACGAAACGAGCGCGGGCGGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG
* * *
14490197 CAAGCCGTGGATCGATAGGCTGGTAGGTGGATTTAGGCACATCTTCATATTTCTATGTGCCAATG
325 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
* *
14490262 CCATTTTTATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGATGTTTCATGGCAA
390 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * ** *
14490327 GATGACTCGTTTTCTATTTTTCATAATTTTCAAAACTTTTTACAGTTCGAGATTTTTTAAAATTT
455 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTT
* *
14490392 TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTACA
520 TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACA
*
14490457 AAAAAACTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
585 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14490522 TTTAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
650 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * **
14490587 GAGTTCCCTAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCAAA
715 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * *
14490652 CATTATGTGTGCACACCCCCCCGGCCCCCCCGATCGTCAGAACCCTAATGCCGCCGGTCAGGTTC
780 CATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * *
14490717 TCC---G--G---CGAC------GCTCCGACGAAGAAAAATGCGGCACCAGCACA
843 TCCGGTGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATACGACACCAGCACA
* * *
14490758 TG-CCGAGCCCAGCATGTGCTATCGCAACCCTCAGTCCGGTCGGATCTTAGACTGGGAATGAACT
1 TGCCCGAGCCCAGCATGTGCTATCGCAACCCTCAGTTCGATCCGATCTTAGACTGGGAATGAACT
* * * * *
14490822 CCGTATGCTTAGACTGGGAATGAA-TTTCGTATGCCTAAGCCAACGCACGAAACGGGCGTGCTGG
66 CCGTATGCTTAGACTGGGAATGAACTCT-GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * *
14490886 CGCTCAGCCGGCCAGAGGGGTGGGATG-ACAAGCCGAGGATCGGTCGGGTCCCCCTTTGCGT-CT
130 CGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * *
14490949 GTCAATCCAGCTGCCACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCC
195 GCCGATCCTGCTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
14491014 TAAACCAACCGACGAAACGAACGGGTGAGCGGGTGAGCGGGTGGGCGGGCACTATGCCGACCAGA
260 TAAGCCAACCGACG--A--AAC----GAGCGCG-G-GC--G-GGGCGGGCACTACGTCGGCCAGA
* * * * * * * *
14491079 GGGGCGGGTTGTGCAAGCCGGGGATCGGTGGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTT
312 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*
14491144 CTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACGTGA
377 CTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
*
14491209 AGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGA
442 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGA
* * *
14491274 TTTTTT-AAATTGTTTTCT-TAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTTTTT
507 TTTTTTAAAATT-TTTT-TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
14491337 TTTTTGGCATGCACAAAAAAATTCAACTAAAAAGTCGTAGTGTACA
570 TTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
14491383 TCATGTGTGC
Statistics
Matches: 3592, Mismatches: 423, Indels: 233
0.85 0.10 0.05
Matches are distributed among these distances:
845 17 0.00
846 21 0.01
847 10 0.00
848 20 0.01
849 6 0.00
850 4 0.00
852 13 0.00
853 6 0.00
854 3 0.00
855 2 0.00
856 11 0.00
857 1 0.00
858 9 0.00
859 2 0.00
860 3 0.00
861 3 0.00
862 6 0.00
863 12 0.00
864 15 0.00
865 317 0.09
866 268 0.07
867 74 0.02
868 155 0.04
869 274 0.08
870 3 0.00
871 105 0.03
872 1 0.00
873 1 0.00
874 55 0.02
875 27 0.01
876 88 0.02
877 1 0.00
879 71 0.02
880 35 0.01
881 133 0.04
882 30 0.01
883 5 0.00
884 1 0.00
885 2 0.00
886 1 0.00
887 4 0.00
888 7 0.00
889 4 0.00
890 1 0.00
891 2 0.00
892 92 0.03
893 129 0.04
894 288 0.08
895 614 0.17
896 49 0.01
897 5 0.00
898 5 0.00
899 2 0.00
901 1 0.00
902 361 0.10
903 217 0.06
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (897 bp):
TGCCCGAGCCCAGCATGTGCTATCGCAACCCTCAGTTCGATCCGATCTTAGACTGGGAATGAACT
CCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
GCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTG
CCGATCCTGCTGCCACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
AAGCCAACCGACGAAACGAGCGCGGGCGGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGC
AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGC
CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
TTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAA
AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
ATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
GGTGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATACGACACCAGCACA
Found at i:14489952 original size:26 final size:26
Alignment explanation
Indices: 14489922--14489974 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14489912 CTGGTCTTAT
*
14489922 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGGATG
14489948 CTTAGACTGGGAATGAACTCTGGATG
1 CTTAGACTGGGAATGAACTCTGGATG
14489974 C
1 C
14489975 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGGATG
Found at i:14490832 original size:26 final size:26
Alignment explanation
Indices: 14490803--14490855 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14490793 CCGGTCGGAT
14490803 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
14490829 CTTAGACTGGGAATGAATTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14490855 C
1 C
14490856 CTAAGCCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14493436 original size:25 final size:26
Alignment explanation
Indices: 14493391--14493440 Score: 93
Period size: 25 Copynumber: 2.0 Consensus size: 26
14493381 CCCGGTCCTT
14493391 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
14493417 CTTAGACTGG-AATGAACTCCGTAT
1 CTTAGACTGGAAATGAACTCCGTAT
14493441 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 14 0.58
26 10 0.42
ACGTcount: A:0.30, C:0.20, G:0.22, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:14495247 original size:26 final size:26
Alignment explanation
Indices: 14495218--14495267 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
14495208 CCGGTCCGAT
*
14495218 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATAAACTCCGTACG
14495244 CTTAGACTGGGAATAAACTCCGTA
1 CTTAGACTGGGAATAAACTCCGTA
14495268 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.22, G:0.24, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTACG
Found at i:14496176 original size:28 final size:28
Alignment explanation
Indices: 14496131--14496187 Score: 89
Period size: 28 Copynumber: 2.0 Consensus size: 28
14496121 TCCAGTCCAT
*
14496131 CTTTAGACTGGGGAATGAACATCCGTATG
1 CTTTAGACTAGGGAATGAAC-TCCGTATG
14496160 CTTTAGAC-AGGGAATGAACTCCGTATG
1 CTTTAGACTAGGGAATGAACTCCGTATG
14496187 C
1 C
14496188 CTAAGTCAAT
Statistics
Matches: 27, Mismatches: 1, Indels: 2
0.90 0.03 0.07
Matches are distributed among these distances:
27 9 0.33
28 10 0.37
29 8 0.30
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (28 bp):
CTTTAGACTAGGGAATGAACTCCGTATG
Found at i:14497050 original size:26 final size:26
Alignment explanation
Indices: 14497014--14497066 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14497004 CCGATTCAAT
* *
14497014 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14497040 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14497066 C
1 C
14497067 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:14497948 original size:26 final size:26
Alignment explanation
Indices: 14497912--14497963 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
14497902 TGGTCCAATT
14497912 TTAGACTGGGAACAAACTCCGTATGC
1 TTAGACTGGGAACAAACTCCGTATGC
**
14497938 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAACAAACTCCGTATGC
14497964 CCAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
TTAGACTGGGAACAAACTCCGTATGC
Found at i:14498309 original size:892 final size:899
Alignment explanation
Indices: 14491402--14500458 Score: 10182
Period size: 881 Copynumber: 10.1 Consensus size: 899
14491392 CACACCCCTC
* * * *
14491402 TGAGTTCTCGTGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCATCACCCATCAC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14491467 ACATCATGTGCGTACACCACCCGGCCCCACCGATCGTCAGAACCCCAATGCTGCCGGTCAGGTTC
66 ACATCATGTGCGCACACCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * * * * *
14491532 TCTGACGATGCTCCGACTATGGTGCACCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCC
130 TCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
*
14491597 CAGCATGTGCTGTCGCAACCCT---T--GG-----TC-----C---G---G---TCCG-AT-CTT
195 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * *
14491636 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGAGCGCTCAACCGG
260 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * ** * *
14491701 CCAGAGGGGCAGGATGCAC-AAGCCGAGGATCGATCGGGTCCCCCTCTGTGTGCTACCGATCCTA
325 CCAGAGGGGCGGGATGCGCAAAG-CGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTG
* ** * * * * *
14491765 CTATCGTAACCCTC-GAT-CTGGTCCAATCTTACACTAGGAATGAACTCCGTATGCCTAAGCCAA
389 CTACCACAACCCTCAG-TCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * *
14491828 CCGAGGAAACGAGCGGGTGGGTAGGCGAGCGGGCACTGCACCGGCCAGAGAGACGGGATGCGCAA
453 CCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
* * *
14491893 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGTCACATCTTAATATTTCTGCATGCCAATGCCA
518 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
*
14491958 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAGGTGAAGTTTCATGGCAAGAC
583 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14492023 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGAGGTTCAGGATTTTTTAAAATTTTTT
648 GACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTT
* * *** *
14492088 TCAGAAGG-AGTTTTGGCCCCAAACCTAACAGACGTGATCCTTGCATTTTTGTTGGCATGCACAA
712 TCGGAAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
14492152 AAAAATTCAGCTAAAAACTCGATGTGTACAAGATTTTCTGACCATTTGAAAAAAGTGTCCCTATT
776 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
14492217 TCAGACACTTTAATGGCTA-TAGGTAGCGAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
841 TCAGACAC-TT-AT-G-TACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
14492280 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * *
14492345 ACATCACGTGTGCACACCCCCTCGGCCCACCCGATCGTCGAAACCCCAGTGCCGTCGGTCAGGTT
66 ACATCATGTGCGCACACCCCC-CGGCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * *
14492410 CTCCGGTGATGC-CC--C-A--AT--------GAAGAAAAATACGGCACCAACACATGCCTGAGC
129 CTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * *
14492461 CCAACATGTGCTGCCGCAACCATCGGTCCGGTCCAATCTTAGACT-GG---G-ACT--G-A--AT
194 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * *
14492516 TAGACTAGGG-ATGAACTCTGCATGCCTAAGTCAACCCACGAAACGAGTGTGCGGCCGTTCAGCC
259 TAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* * * * * *
14492580 GGCCAGAGGGGTGGGAT--GCATAAGTCGAGGATCGACCGGGTCCCCCTCTGCATGCGGCCGATC
323 GGCCAGAGGGGCGGGATGCGCA-AAG-CGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATC
* * ** * * ** * *
14492643 CTGCTACCGCAGCCCTTGGTGCAG-TCCAATCTTAGACTTTGAATGAACTGCGTATGCATAAGCC
386 CTGCTACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * * *
14492707 AACTGACGAAATGAACGTGCGGGCAGACGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGC
451 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGC
**
14492772 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGC
516 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
* * *
14492837 CATTTTTATGGCTTGTAAATTCACACAGTGGTCCCTTATGCCTTCACGTGAAGTTTCATGGCAAG
581 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * * * **
14492902 ATGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGATTCAAGA-TTTTTAAAATTGT
646 ACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATT-T
* * * *
14492966 TTTC-GAAAG-ATTTTTGGCCCCAAAATTGGTAGGCTTGATCCTTGTATTTTTGTTGGCATGCAC
710 TTTCGGAAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
*
14493029 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAACGTGTCCCCA
774 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
14493094 TTTCAGACACTTTAATGGCTACTGGCAACGAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGG
839 TTTCAGACAC-TT-AT-G-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
14493159 TGAGTTCTCGAGGTTTGATGAGGGATAGAGGGG-CAATATAATGCCCAAGTACCAGCACCCATCG
1 TGAGTTCTCGAGGTTTGATGAGGGATAG-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * **
14493223 CACATCATGTGCGCACACCTCCCCTGGCCCCCTTGATCATCGGAACCCCAATGTCGTAGGTCAGG
65 CACATCATGTGCGCACACC-CCCC-GGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * *
14493288 TTCTCCGGTGATGCTCCGGGGATGGTGCCCCAGCGAAGAAAAATGCGAG-ACCAGCACATGCCCG
127 TTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCG-GCACCAGCACATGCCCG
* ** * *
14493352 AGCCCAGCATGTTACTGCC-CAACCCTCGACCCGGTCC-TTCTTAGACTGGAAATGAACTCCGTA
191 AGCCCAGCATG-TGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTA
* * * *
14493415 TGCTTAGACT-GGAATGAACTCCGTATTGCCTAAGTCAACCCACGAAAAAAGCTGCGTACGAGGT
255 TGCTTAGACTGGGAATGAACTCCGTA-TGCCTAAGTCAACCCACG--AAACG-AGCGTGCG-GGC
* * ** **
14493479 GCTCACGTCGGCCAGAGGGGCAGGAATGC-C-TTGACGGTCTATCGAT-GAGTCGCACTGCTTCT
315 GCTCA-GCCGGCCAGAGGGGC-GGGATGCGCAAAG-CGG-GGATCGATCG-G--G---T-C--C-
* * * * * * * *
14493541 AAACATCCTCTGCATGCTGTCGATCCTGCTGCCGTA-AACCTTGA-TCC-GGTCTGATCTTAGAC
366 ---C--CCTCTACGTGCTGCCGATCCTGCTACC--ACAACCCTCAGTCCAGATCCGATCTTAGAC
* *
14493603 TGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACTAGCGAGCGAGCGGGCGGGCTGACGG
424 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-CGAGCGGGCGGGC-GG--G-CGG
* * * * * *
14493668 GCGGGCACTACGCCGACCAAAGAGATGAGATGCGCAAGCCGTGGATCGATAGGGTGGTTGGTGGG
481 GCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
14493733 TTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
546 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
14493798 GTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGGCTCGTTTTCTATTTTTCATGATTTTT
611 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * *
14493863 GAAACTTTTTACGGTTTGGGATTTTTTAAAAGTTTTTCGGAAGG-AGTTTTGTCCCCAAACTTGG
676 AAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGCA-TTTTGGCCCCAAACTTGG
* * * *
14493927 TAGACATGATCCTTGTATTTTTTTTGGCATGCCCAAAAAAATTCAGCTGAAAACTCGAAGTGTAC
740 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
14493992 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGACTACTGGCAGCAA
805 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC-TT-ATG--TACTGGCAGCAA
*
14494057 ACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
866 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
*
14494091 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCGC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14494156 ACATCATGTGCGCACACCCCCCGGCCCCGTCGATCGCCGGAACCTCAATGCCGCCGGTCAAGTTC
66 ACATCATGTGCGCACACCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * * * *
14494221 TCCGAG-GATGCTTCGGTGATGGTGCCCCAGCGAAGCAAAATGGGGCGCCAGCACATGCCCGAGC
130 TCCG-GCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * * **
14494285 CCAGCATGTGCTGCCACAACCCTCAGTCTGATCCAATCTTAGACTAGGAATGAACTCCACATGCT
194 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCT
* ** *
14494350 TAGACTGGGAATGAACTCTGTATTTCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCG
259 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
** * * * * * * * * *
14494415 GTTAGAGGGCCAGGATACG-GAAGCCGGGGATCGGTCGGGTCTCCCTCTGCGTGCTGTCGATCTT
324 GCCAGAGGGGCGGGATGCGCAAAG-CGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCT
* * * * *
14494479 GCTACTACAACCCTCAAT-CTGGTCAGATCTTAGACTGGGAATGAACTCCG-ATGCCTAAGCCAA
388 GCTACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** *
14494542 CCGATGAAACGA----GCGGGCGGGCGGGCGGTCACTACGTCGACCAGAGAGACGGGATGCGCAA
453 CCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
* * *
14494603 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCATATCCTCATATTTCTGCATGCCAATGCCA
518 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
* *
14494668 TTTTTATGGCTTTGTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTT-ACCGGCAAG
583 TTTTTATGGC-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA-TGGCAAG
* * * *
14494732 ATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTT
646 ACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
** **
14494797 TTC--AAAACAAGTTTTGGCCCCAAACTTGGTAGACACGATCCTTGTATTTTT-TTCGGCATGCA
711 TTCGGAAGGC-A-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCA
*
14494859 CAAAAAAATTCAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
773 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
14494924 ATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTACGGGGGT
838 ATTTCAGACAC-TT-AT-G-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
14494989 G
899 G
* *
14494990 TGAGTTCTCGAGG-TTGATGAGGGATGGGGGGCCAATATAAGGGCCAAGTACCAGTACCCATCGC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *** *
14495054 ACATCATGTGCACACACCCCCCGGCCCCCCGATCGCCAGAACCCCAACATCGTCGGTCAGGTTCT
66 ACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
** * ** * * * *
14495119 CCGGCGATGCTTTGACGATGGTGCCCCGATGAAGAAAAATACGGCACCATCACATGCCTGAGCCT
131 CCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * *
14495184 AGCATGTGCTG-CGCAACCCTCAGCCCGGTCCGATCTTAGACTGGGAATGAACTCCGTACGCTTA
196 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * * *
14495248 GACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT-CTGGCGTTCAACCTGC
261 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * * * * * *
14495312 CAGAGGGGCGGGATACGCAAGGCGTGCATCGACCGGGTCCCCTTCTGCATGCTGTCGATCTTGCT
326 CAGAGGGGCGGGATGCGCAAAGCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTGCT
* * * * *
14495377 ATCGCAACCCTCAGTCC-GATCTGATCTTAGACTGGGAATGTACTCCATATGCCTAAGCCAACCG
391 ACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
** * * * * * * * * * *
14495441 ATAAAACAAGTGGGCGGACGGGCAGGCGGGCACTACGCCAGACAGAGAGATGAGATGAGCAAGCC
456 ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
14495506 ATGGATCGATAGGGTGGTAGGTGGGTTAAGGTACATCTTCATATTTCTACGTGCCAATGCCATTT
521 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTT
* *
14495571 TCATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGAC
586 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * *
14495636 TCGTTGTCTATTTTTCACAATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTAACATTTTTTCGG
651 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
14495701 AA-GAAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
716 AAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
14495765 ATTCAGCTAAAAACTCGGAAGTGTACAAGGTTATTGTGACCATTTGAAAAAAGTATCGCCCATTT
780 ATTCAGCTAAAAACTC-GAAGTGTACAAGATT-TTGTGACCATTTGAAAAAAGTGTC-CCCA-TT
14495830 TCAGACACTTAATGGGCTGACTGGCAGCAAACCTGTTAAAATCTCAAATGCTCTTTAAGGGGGTG
841 TCAGACACTT-AT--G-T-ACTGGCAGCAAACCTG-TAAAATCTCAAATGCTCTTTAAGGGGGTG
*
14495895 TGACGTTCTTTGAGGTATTGATGAGGG-TA-GGGGCCGAGATATAAAGGGCCAAAGTACCAGCAG
1 TGA-GTTC-TCGAGGT-TTGATGAGGGATAGGGGGCC-A-ATAT-AAGGGCC-AAGTACCAGCA-
* * * ** * *
14495958 CCCATTGCACATCATGTG-GCACA----CC-ACACCCCGATTCACCGGAACCCCAATGTCGCTTG
58 CCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGA-TCGTCGGAACCCCAATGCCGC-CG
* ** * * **
14496017 GTCAGGTTCCCCATTCGATGGCTTCGAGCGATGGTTCCCCGGCGAAAGAAAAATGCGGCACCAAA
121 GTCAGGTTCTCC-GGCGAT-GCTCCG-GCGATGGTGCCCCGGCG-AAGAAAAATGCGGCACCAGC
* * * * *
14496082 ACATGCCTGGAGCCGAGCATGTGCTACCGCAACCCTCGATCCAGTCC-ATCTTTAGACTGGGGAA
182 ACATGCC-CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATC-TTAGACT-GGGAA
* * *
14496146 TGAACATCCGTATGCTTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAA-TCACGAAATGAGC
244 TGAAC-TCCGTATGC-TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * *
14496210 GTACGGCCGCTCAGCC-GCCGGA-GGGC-GGATGTGGC-AAGCTGGGATCGGACTGGGGTCCCCC
307 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG-CGCAAAGCGGGGATC-GA-TCGGGTCCCCC
* * * * * ** * ** * **
14496271 TCTGCATGCTACCGATCCTACTGCTGCAACCCTCAGT-CAGGTTTGTTCTTAGACCCGGAATGAA
369 TCTACGTGCTGCCGATCCTGCTACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAA
** * * * * *
14496335 CTCTATATGCCTAATCCAATCGACGAAACGAGCGGCGGGCGGGCGGGTGGGCTGGCACTACGCCG
434 CTCCGTATGCCTAAGCCAACCGACGAAACGA---GCGGGCGGGCGGGCGGGCGGGCACTACACCG
14496400 GCCAGAGAGACGGGATGCGGCAAGCCGTTGGATCGATAGTGGTGGTA-GTGGGTTTAGG-ACATC
496 GCCAGAGAGACGGGATGC-GCAAGCCG-TGGATCGATAG-GGTGGTAGGTGGGTTTAGGCACATC
* *
14496463 TTCATATTTCTGCATGCCAATGCCATTTTTATGGGTTGTAAATTCATACAATGGTCCCTTAAGCC
558 TTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * * * *
14496528 TTCACGTGAAGTTTCATGGCCAGATGACTCATTTTCTATTTTTCAGGATTTTTTAAACTTTTTGC
623 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGC
* ** * *
14496593 GATTCAAGATTTTTTAAAATTTTTTCGGAAGG-AGTTTTTGCCCCAAACTTGGTAGACGTGATGC
688 GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGATCC
* * *
14496657 TTGTGTTTTTTTTGGCATGCACAAAAAAATTCATCTAAAAACTCGAAGTGTACAAGATTTTGTGA
752 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
14496722 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
817 CCATTTGAAAAAAGTGTCCCCATTTCAGACAC-TT-AT-G-TACTGGCAGCAAACCTGTAAAATC
* * **
14496787 CCAAATGCTCTTAAACTGGGTG
878 TCAAATGCTCTTTAAGGGGGTG
* * *
14496809 TGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAGCAGGACCCATCGC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14496874 GCATCAAGTGCGCACACCCCTCGGCCCTCCCGA---TC-G---CCGAA-G-C-CC---CA-----
66 ACATCATGTGCGCACACCCCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* **
14496921 -------ATGCTCCGGTGATGGTGCCTTGGCGAAGAAAAATGCGGCA-CAGCACATGCCCGAGCC
130 TCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * *
14496978 CAGCATGTGCTGCCGTAACCCTCGGTCCGATTCAATCTTAGACTGGGAATGAACTTCGTATGCTT
195 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTT
* ** * * *
14497043 AGAATGGGAATGAACTCCGTATGCCTAAGTCAACCTGCGAAACGAGTGTGCGGCCGCTCAGCCAG
260 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * * *
14497108 CCAGAGGGGCGGGATGCGCAAATCGAGGATCGATCGAGTCCCCCTCTACATGCTGTCGATCCTGC
325 CCAGAGGGGCGGGATGCGCAAAGCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTGC
* ** * * * *
14497173 TACCATAACCCTTGGTCTAG-TCTGATCTTAGACTGGGAATGAACTCTGTACGCCTAAGCCAACC
390 TACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * *
14497237 GACGAAACGAGTGGGCGGGCGGGCGGACAGGTGGGTACTACGCCAGCCAGAGAGACGAGATGCGC
455 GACGAAACGAGCGGGCGGGCGGGC-G---GGCGGGCACTACACCGGCCAGAGAGACGGGATGCGC
* * * *
14497302 AAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCGTATTTCTGCATGCCAATGC
516 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
14497367 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
581 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* *
14497432 ACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGACTTTTTAAAATTTT
646 ACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
* * *
14497497 TTCGGAAGG-AGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTTCAC-
711 TTCGGAAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
*
14497560 AAAAAATTCAGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
775 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14497625 TTTAGACAC-T-T-TACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAA-GGGGTG
840 TTCAGACACTTATGTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* **
14497681 TGAGTTCTCGACGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTAATCGC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
14497746 ACATCTTGTGGGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCT
66 ACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * * *
14497811 CCGGCGATGCTCCTGCGATGGTGCCCCGACGAAGAAAAA-GACGGCACCAGCAAATGCTCGAGCC
131 CCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATG-CGGCACCAGCACATGCCCGAGCC
* * * * **
14497875 CAGTATGTGCTGCCACAACCCTCGGTCTGGTCCAATTTTAGACTGGGAACAAACTCCGTATGCTT
195 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTT
* * *
14497940 AGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCATGAAATGAGCGTGCGGGCGCTCAGCCGG
260 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* *
14498005 CCAGAGGGGCGGGATGCGC-AAGCGTGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCCGC
325 CCAGAGGGGCGGGATGCGCAAAGCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTGC
* * * *
14498069 TGCCGCAACCCTCAGTCCAG-TCCAATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACC
390 TACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
14498133 GATGAAACGAGCGGGC-GACTGGGCGGGCGGGCACTACACTGGCCAGAGAGACGGGATACGCAAG
455 GACGAAACGAGCGGGCGGGC-GGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAG
*
14498197 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCAT
519 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
*
14498262 TTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
584 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * *
14498327 ACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTT
649 ACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
*
14498392 GGAAGGCATTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAA
714 GGAAGGCATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
14498457 AATTCAGCTAAAAACTC-AATGTGTACAAGATTTTGTGACCATTTGAAAAAAAGTGTCCCTATTT
779 AATTCAGCTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTT
*
14498521 TAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
842 CAGACAC-TT-AT-G-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * *
14498583 TGACTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAAGTACCAGCACCCATCGT
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
14498648 ACATCATGTGCGCACA--------CCCCCCGATCGTTGGAACCCCAATGCCACCGGTCAGATTCT
66 ACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * **
14498705 CCGACGATGCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCGAGCGT
131 CCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
*
14498770 AGCATGTGCT-ACGCAA-CC-C--T-CGG--------T---CT-GG--T---CT--G-AT-CTTA
196 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTA
* *
14498808 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAGCCGGC
261 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * *
14498873 CAGAGGGGCGAGATGCGC-AAGTCGGGGATCGATCGGGTCCCCCTCTGA-GTGCTACCAATCTTG
326 CAGAGGGGCGGGATGCGCAAAG-CGGGGATCGATCGGGTCCCCCTCT-ACGTGCTGCCGATCCTG
* ** * * * * *
14498936 CTGCTGCAATCCTCAGT-CTGATTCGATCTTAGACTGGGAATGAACTCTGTATACCTAAGCCAAC
389 CTACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * * *
14499000 CCACGAAACAAGCAGGCGGGCGGACGGGCAGGCACCACACCGGCCAGAGAGACGGGATGCGTAAG
454 CGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAG
* * *
14499065 CCGTGGATC-ATTGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCAT
519 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
*
14499129 TTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
584 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
14499194 ACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC
649 ACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
* * * *
14499259 GAAAGG-AGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTATATTGGCATGCACAAAA
714 GGAAGGCA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
14499323 AAATTCAGCTAAAAACCCAAAGTGTATAAGATTTTGTGACCATTTGAAAAAATTGTCCCCATTTC
778 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
14499388 AGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTCGTTAAGGGGATG
843 AGACAC-TT-AT-G-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
14499449 TGAGTTTTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14499514 ACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATACCGTCGGTTAGGTTG
66 ACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * *
14499579 TCCGGCAATGCTCCGGTGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCC
130 TCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * *
14499644 CAGCATGTGCTACCGTAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTT
195 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * * *
14499709 AGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCAC-AGTACAAGCGTGCGAGCGCTCAGTCG
260 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA-AACGAGCGTGCGGGCGCTCAGCCG
* * * * **
14499773 GCCAGAGAGGCGGGATGCGCAAACCGGGGATCGGTCGGGTCCCCCTCTACGTACTGCTTATCCTG
324 GCCAGAGGGGCGGGATGCGCAAAGCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTG
* * * *
14499838 CTACCACAACCCTCGGTCC-GTTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAAC
389 CTACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
*
14499902 CGACGAAACGA--------GCGGGCGGGCGGGCACTACACCGGCTAGAGAGAC-GGATGCGCAAG
454 CGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAG
* *
14499958 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTGCATATTTCTACATGCGAATG-CAT
519 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA-
** * *
14500022 TTTTTATGTTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGAT
583 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * * *
14500087 GACTTGTTTTCCATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTTAAATTTTTT
648 GACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGA-TTTTTTAAAATTTTT
* * *
14500152 TAGG-AGGCATTTTGGCCCCAAACTTGGTAGAGGTGATCCTTGTATTTTTGTTGGCATG-AAAAA
712 TCGGAAGGCATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
14500215 AAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
777 AAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * *
14500280 TCAGACGCTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCCCTTTAAGGGGGAG
841 TCAGACAC-TT-AT-G-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * * * *
14500343 TGAGTTCTTGAGGTTTGATGATGGATACGGAGCCAATATAAGGGCCATGTACCAGCACCCATCGC
1 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* ** *
14500408 ACATAATGTGCGCACACCCCCTCAACCCCCCGATTGTCGGAACCCCAATGC
66 ACATCATGTGCGCACACCCCC-CGGCCCCCCGATCGTCGGAACCCCAATGC
14500459 GTATGCCTAA
Statistics
Matches: 7043, Mismatches: 851, Indels: 554
0.83 0.10 0.07
Matches are distributed among these distances:
865 51 0.01
866 151 0.02
867 357 0.05
868 152 0.02
869 4 0.00
870 2 0.00
871 7 0.00
872 86 0.01
873 37 0.01
874 2 0.00
875 105 0.01
876 8 0.00
877 4 0.00
878 98 0.01
879 337 0.05
880 196 0.03
881 682 0.10
882 87 0.01
883 25 0.00
884 19 0.00
885 13 0.00
886 6 0.00
887 2 0.00
888 2 0.00
889 2 0.00
891 1 0.00
892 275 0.04
893 89 0.01
894 618 0.09
895 129 0.02
896 258 0.04
897 238 0.03
898 189 0.03
899 479 0.07
900 127 0.02
901 72 0.01
902 273 0.04
903 41 0.01
904 17 0.00
905 35 0.00
906 20 0.00
907 39 0.01
908 46 0.01
909 45 0.01
910 46 0.01
911 95 0.01
912 51 0.01
913 30 0.00
914 65 0.01
915 41 0.01
916 122 0.02
917 52 0.01
918 23 0.00
919 54 0.01
920 228 0.03
921 23 0.00
922 8 0.00
923 68 0.01
924 6 0.00
925 10 0.00
926 17 0.00
927 17 0.00
928 7 0.00
929 11 0.00
930 109 0.02
931 262 0.04
932 272 0.04
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
ACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
CCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTA
GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
CAGAGGGGCGGGATGCGCAAAGCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTGCT
ACCACAACCCTCAGTCCAGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCC
GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGG
AAGGCATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTATGTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
Found at i:14499709 original size:26 final size:26
Alignment explanation
Indices: 14499680--14499732 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14499670 CCGGTCCGAT
14499680 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
14499706 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14499732 C
1 C
14499733 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14501141 original size:744 final size:731
Alignment explanation
Indices: 14499727--14501200 Score: 2050
Period size: 744 Copynumber: 2.0 Consensus size: 731
14499717 AATGAACTCT
* *
14499727 GTATGCCTAAGTCAACCCACAGTACAAGCGTGCGAGCGCTCAGTCGGCCAGAGAGGCGGGATGCG
1 GTATGCCTAAGTCAACCCACAGAACAAGCGTGCGAGCGCTCAGCCGGCCAGAGAGGCGGGATGCG
* ** * *
14499792 CAAACCGGGGATCGGTCGGGTCCCCCTCTACGTACTGCTTATCCTGCTACCACAACCCTCGGTCC
66 CAAACCGGGGATCGGTCGGGTCCCCCTCTACGTACTACCAATCCTACTACCACAACCCTCAGTCC
* **
14499857 GTTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
131 GTTCTGATCTTAGATCGGGAATGAACTCAATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
*
14499922 CGGGCACTACACCGGCTAGAGAGACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
196 CGGGCACTACACCGGCCAGAGAGACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* **
14499987 TAGGCACATCTGCATATTTCTACATGCGAATGCATTTTTTATGTTTTGTAAATTCATACAATGGT
261 TAGGCACATCTGCATATTTCTACATGCCAATGCATTTTTTATGGCTTGTAAATTCATACAATGGT
* * *
14500052 CCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGATGACTTGTTTTCCATTTTTCATGATTTTTGA
326 CCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGATGACTCGTTTTCCATTTCTCATAATTTTTGA
** * *
14500117 AACTTTTTGTGGTTCGGGATTTTTTTAAATTTTTTTAGGAGGCATTTTGGCCCCAAACTTGGTAG
391 AACTTTTTACGGTTCAGGA-TTTTTTAAAATTTTTTAGGAGGCATTTTGGCCCCAAACTTGGTAG
*
14500182 AGGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAACATTCAGCTAAAAACTCGAAGTGTACAAG
455 ACGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAACATTCAGCTAAAAACTCGAAGTGTACAAG
*
14500247 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACGCTTTAATGGCTACTGACAGCAAACC
520 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACC
* * *
14500312 TGTAAAATCTCAAATGCCCTTTAAGGGGGAGTGAGTTCTTGAGGTTTGATGATGGATACGGAGCC
585 TGTAAAATCTCAAATGCCCTTTAAGGGGGAGTGAGTTCTTGAGGTTTGAGGAGGGACACGGAGCC
*
14500377 AATATAAGGGCCATGTACCAGCACCCATCGCACATAATGTGCGCACACCCCCTC-AACCCCCCGA
650 AATATAAGGGCCAAGTACCAGCACCCATCGCACATAATGTGCGCACACCCCC-CGAACCCCCCGA
*
14500441 TTGTCGGAACCCCAATGC
714 TCGTCGGAACCCCAATGC
* * * * * * *
14500459 GTATGCCTAAGTCAATCCAC-GAAACGAGCGTGCGGGCGCTCAGCCTGCCGGAGGGGCGGGATGT
1 GTATGCCTAAGTCAACCCACAG-AACAAGCGTGCGAGCGCTCAGCCGGCCAGAGAGGCGGGATGC
* * * ** * * *
14500523 GCAAGCTGGGGATTGG-CTGGGTCCCCCTCTGGGTGCTACCAATCCTACTGCCGCAACCCTCAGT
65 GCAAACCGGGGATCGGTC-GGGTCCCCCTCTACGTACTACCAATCCTACTACCACAACCCTCAGT
* * *
14500587 CGGGTT-TGTTCTTAGATCGGGAATGAACTCAATATGCCTAAGCCAACCGACGAAATGAGCGGGC
129 C-CGTTCTGATCTTAGATCGGGAATGAACTCAATATGCCTAAGCCAACCGACG-AA--A-CGAGC
* *
14500651 GGGCGGGCGGGTGGGCTGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATA
189 GGGCGGGC------G--GGCACTACACCGGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATA
** * *
14500716 GGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCA-TTTTTGTGGCTTG
245 GGGTGGTAGGTGGGTTTAGGCACATCTGCATATTTCTACATGCCAATG-CATTTTTTATGGCTTG
* * *
14500780 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCCAGATGACTCGTTTTCTA
309 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGATGACTCGTTTTCCA
*
14500845 TTTCTCATAATTTTTGAAACTTTTTACGGTTCAGGA-TTTTTAAAATTTTTTCGGATGG-ATTTT
374 TTTCTCATAATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTAGGA-GGCA-TTT
* * * *
14500908 TTGCCCCAAACTTGGTAGACGTGATGCTTGTATTTTTTTTGGCATGCACAAAAAA-ATTCAGCTA
437 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG-AAAAAAAACATTCAGCTA
*
14500972 AAAACTCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
501 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
14501037 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCT-AGGT
566 TGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCCCTTTAAGGGGGAGTGAGTTCT-TGAGGT
* *
14501101 TTGAGGAGGGACA-GGGGACCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
630 TTGAGGAGGGACACGGAG-CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATAATGTGCGC
**
14501165 ACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAAT
694 ACACCCCCCGAACCCCCCGATCGTCGGAACCCCAAT
14501201 ACCGTCGGTT
Statistics
Matches: 651, Mismatches: 68, Indels: 34
0.86 0.09 0.05
Matches are distributed among these distances:
731 2 0.00
732 145 0.22
733 5 0.01
735 1 0.00
736 12 0.02
742 1 0.00
743 22 0.03
744 284 0.44
745 177 0.27
746 2 0.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (731 bp):
GTATGCCTAAGTCAACCCACAGAACAAGCGTGCGAGCGCTCAGCCGGCCAGAGAGGCGGGATGCG
CAAACCGGGGATCGGTCGGGTCCCCCTCTACGTACTACCAATCCTACTACCACAACCCTCAGTCC
GTTCTGATCTTAGATCGGGAATGAACTCAATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
CGGGCACTACACCGGCCAGAGAGACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTGCATATTTCTACATGCCAATGCATTTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGATGACTCGTTTTCCATTTCTCATAATTTTTGA
AACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTAGGAGGCATTTTGGCCCCAAACTTGGTAGA
CGTGATCCTTGTATTTTTGTTGGCATGAAAAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACCT
GTAAAATCTCAAATGCCCTTTAAGGGGGAGTGAGTTCTTGAGGTTTGAGGAGGGACACGGAGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATAATGTGCGCACACCCCCCGAACCCCCCGATC
GTCGGAACCCCAATGC
Found at i:14501347 original size:26 final size:26
Alignment explanation
Indices: 14501318--14501370 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14501308 CCGGTCCGAT
14501318 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
14501344 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14501370 C
1 C
14501371 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14502437 original size:8 final size:8
Alignment explanation
Indices: 14502424--14502448 Score: 50
Period size: 8 Copynumber: 3.1 Consensus size: 8
14502414 GATGAAACAA
14502424 GCGAGCGG
1 GCGAGCGG
14502432 GCGAGCGG
1 GCGAGCGG
14502440 GCGAGCGG
1 GCGAGCGG
14502448 G
1 G
14502449 TGGGCACTAC
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
8 17 1.00
ACGTcount: A:0.12, C:0.24, G:0.64, T:0.00
Consensus pattern (8 bp):
GCGAGCGG
Found at i:14504456 original size:26 final size:26
Alignment explanation
Indices: 14504416--14504468 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14504406 CTGGTCTGAT
* *
14504416 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14504442 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
14504468 C
1 C
14504469 CTAGGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14506227 original size:26 final size:26
Alignment explanation
Indices: 14506191--14506243 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14506181 TCGGTTTGAT
*
14506191 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14506217 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14506243 C
1 C
14506244 CAAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14507059 original size:894 final size:893
Alignment explanation
Indices: 14505155--14509819 Score: 5803
Period size: 896 Copynumber: 5.2 Consensus size: 893
14505145 CCCATCACCT
* * *
14505155 CCCGATCGTCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGCTCCGACGATGGTGCACC
1 CCCGATCG-CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCC
* * * * ** *
14505220 GACGAAGAAAAATACGGCCCCAGCACATGCCCGAGTCCAACATGTCCTGTTGTAACCCTCAG-TC
65 GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTC
* * * * *
14505284 TGGTCCGATCCTAGACTGGGAATGAACTCCATATGCTTAGATTGAGAATGAACTCCATATGCCTA
130 TGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * ** * * *
14505349 AGTCAACCCACGGAACGAGCGTGCGGGCACTCAACCGGCTAGAGGCGCGAGATGCGCAA-CTCGG
195 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGC-CGG
* * *
14505413 GGATCGGCCGAGT-TCCCTCTGCATGCTACCGATCCTACTACCGTAACCCTCAGTCTGGTCTGAT
259 GGATCGGCCGAGTCCCCCTCTGCATGCTGCCGATCCTACTACCGCAACCCTCAGTCTGGTCTGAT
* * * * *
14505477 CTTAGACTAGGAATGAATTCCATATACCTAAGCCAATCGACGAAACGAGCGGGCGGGCAGGCGGG
324 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GG-A--CGGG
* * *
14505542 CACTACGTCGACCAAAGAGACGGGATCCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
385 CACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
14505607 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAAGGGTCCC
450 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * *
14505672 TTAAGCCTTAACGTGAAGTTTCATGGCGAGACAACTCGTTTTCTATTTTTCATGATTTT-AGAAA
515 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCA-AAA
* * * *
14505736 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTCGCCCCAAACTTGGTAGAC
579 CTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCGAAGGAGATTTGGCCCCAAACTTGGTAGAC
* * * *
14505801 ATGATCCTTGTATTTTTTTTGGCATGGACAAAAAAATTCTGCTAGAAACTCAAAGTGTACAAGAT
643 ATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * *
14505866 TTTGTGGCCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAACGGCTACTGGCAACAAACCTG
708 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTG
* * *
14505931 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGTGATAAGGGGCCAA
773 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* *
14505996 TATAAGTGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCTGGCCCC
838 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GG-CCC
* * * * *
14506054 CCCGATCGTCGAAACCCCAATGTCGCCGGTCAGGTTATCCGACGATGCTTCGGCGATGGTGCCCC
1 CCCGATCG-CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCC
* * *
14506119 GATGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAG-ATGTGCTACCGCAACCCTCAGTTC
65 GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTC
** * *
14506183 -GGTTTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCAA
130 TGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
14506247 AGTCAACCCACGAGACGAACATGC-GGCGCTCGGTCGGCCAGAGGGGCGGGATGCCCAAGCTGGG
195 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* ** ** * * * * * *
14506311 GATCTGCCGAGTCTACCTCTGTGTGCTGCCAATCCTGCTACCCCAACCCTCGGCCCGGTCTGATC
260 GATCGGCCGAGTCCCCCTCTGCATGCTGCCGATCCTACTACCGCAACCCTCAGTCTGGTCTGATC
* * *
14506376 TTAGACTAGGAATGAACTCCGTATGCTTAAGCCAACCGACGAAATGAGCGGGCGGACGGGCACTA
325 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCACTA
* * * *
14506441 CGTCGGCCAAAGAGATGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAGA
390 CGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
*** * *
14506506 TCTTCATATTTCTATGTGCCAATGCCGTTTTTATGGCTTGTAAATTCAGACAATGGTCCCTTAAG
455 TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
*
14506571 CCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTT
520 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTT
* * * *
14506636 ACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGATTTGGTCCTAAACTTGGTAGACGTGATC
585 ACGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGATTTGGCCCCAAACTTGGTAGACATGATC
* * * *
14506701 CTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAATTCGAAGTGTACAAGATATTGTG
649 CTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
14506766 ACCATTTGAAAAAATTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAAT
714 ACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
*
14506831 CTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
779 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * *
14506896 GTCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCGGCGCA
844 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC-CC
* ** *
14506947 GCCGATCGCAAAAACCCCAATGCCGTCGGTCAGGTTCTAC-AGCGATGCTCCGGCGATGGTGCCC
1 CCCGATCGC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-CGATGCTCCGGCGATGGTGCCC
* * * * * *
14507011 CAACAAAGAAAAATGCAGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTC
64 CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGT-
*
14507076 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
128 ---TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * *
14507141 GCCTAAGTCAACCAACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGTGGGATGCGCAAG
190 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAG
* * * * *
14507206 CCGGGGATCGGCCGGGTCCCCCTCTGCATGCTGCCGATCCTACTGCTGTAACCCTCAGTCCGGTC
255 CCGGGGATCGGCCGAGTCCCCCTCTGCATGCTGCCGATCCTACTACCGCAACCCTCAGTCTGGTC
* * * *
14507271 CGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCTACGAAACGA----GCGGACGGG
320 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGG
* * ** *
14507332 CTCTACGTCGGCTAGAGAGACGGGATTTGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAG
385 CACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
14507397 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
450 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * * *
14507462 TTAGGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTCTCTATTTTTCACGATTTTGAAAAC
515 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC
* * * * *
14507527 TTTTTACGGTTCAGGATTTTTTATACTTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACG
580 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG-AAGGAGATTTGGCCCCAAACTTGGTAGACA
*
14507592 TGATCCTTGTATTTTTTTTGGGATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
644 TGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
** * *
14507657 TTGTGACCAGCTGAAAAAATTGTCCCCATTTTAGACACTTTAATGGCTACTGACAGCAAACCTGT
709 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * * *
14507722 AAAATCTAAAATGCTCTTTAAGGGGGTATGAGTTCTCAACGTTTGATGAGGGATAGGGGACCAAT
774 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * *
14507787 ATAAGGGCCAAGTACGAGCACCCTTCACACATCATGGGCGCACACCCCCTCGGCCC
839 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCC
* * *
14507843 CCTCGATCGTCGGAACCCCAATGCCATCGGTCAGGTTCTCCGGCGATGCTCCGTCGATGGTGCCC
1 CC-CGATCG-CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCC
* * * * *
14507908 CGGCCAAGAAAAATACGACACTAGCACATGCCC-AGCCCAGCATGTGCTGCCACAAACCTCGGTT
64 CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC-AACC-C----
* *
14507972 TGATCCGATCTTAGACTTGGAATGAACTCCGTATGCTTAAACTGGGAATGAACTCCGTATGCTTA
123 ---T-C-A-GTT---C-T-G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCTTA
* * * * *
14508037 AACTGGGAATGAACTCCGTATGCCTAAGTCAACCAATGAAACGAGCGTGCGGGCGCTCAGTTGAC
169 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGC
* * * ** *
14508102 CAGAGGGACAGGATGCGCAAGCCGGGGATCGGTCGAGTCCCCCTCTGCATGC-GTTTGATACTAC
234 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGAGTCCCCCTCTGCATGCTG-CCGATCCTAC
* * * * *
14508166 TATCGCAACCCTC-GATCTGGTTTGATCTTAGACTGGGAATGAATTTCGTATGCCTAAGCCAACT
298 TACCGCAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * * * * * * **
14508230 GATGAAACGAGCGGGTGGGCAGGCACTAGGCCGACCAGAGAGGCAGGATTCGGTAGCCGTGGATC
362 GACGAAACGAGCGGGCGGACGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
14508295 GATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCGATGCCATTTTTGTGGC
427 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* * * * *
14508360 TTGTAAATTCATACGATGGTCCCTTAATCCTTCACGCGAAGTTTCATGGTAAGACGACTCATTTT
492 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * ** * *
14508425 CTATTTTTTACGATTTTTGAAACTTTTTACGGTTTGGGATTTTCTAAAATTTTTTCGGAAGGA-A
557 CTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGA
* * * *
14508489 TTTTAGCCCCAAACTTCGTAGACATGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGC
621 -TTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* * *
14508554 TAAAAACTCAAAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
685 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTT
* ** *
14508619 AAAGGCTACTGATAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
750 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* *
14508684 TTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCATCGCACATCATGTGCGC
815 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* *
14508749 ACGCCCCCCGACCC
880 ACACCCCCCGGCCC
* * * *
14508763 TCCTGATCACCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGACAATGCTCCGGCGATGGTGCCC
1 -CCCGATC-GCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCC
** ** * * *
14508828 CGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAACATGTGCTGTCGCAACCCTC-GGT
64 CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTT
* * * *
14508892 CTGGTCCAATCATAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCT
129 CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * **
14508957 AAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGTCGACCAAAGGGGCGAGATGCGTAAGCCAA
194 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * * * *** *
14509022 GGATCGGTCGGGTCCCCTTCTGCGTGCTGCCGATCCTGCTGTTGCAACCCTCAGTCTGGTCCGAT
259 GGATCGGCCGAGTCCCCCTCTGCATGCTGCCGATCCTACTACCGCAACCCTCAGTCTGGTCTGAT
* *
14509087 CGTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGG
324 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-CGGGCGGACGGG
** * * * *
14509152 CACTACACCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCAATAGGGT-GTAGCTGGGTTTTG
385 CACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
14509216 GCACATCTTCATATTTCTACACGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCC
450 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
*
14509281 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAAAC
515 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC
* ** *
14509346 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAATGAG-TTCTGGCCCCAAACTTCTTAGACC
580 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAGGAGATT-TGGCCCCAAACTTGGTAGACA
* * *
14509410 TGATCCTTCTATTTTTTTTTTTCGCATGCACAAAGAAATTCAGCTAAAAACTCGAAGTGTACAAG
644 TGATCCTTGTA---TTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
14509475 ATTTTCTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
706 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACC
* * *
14509540 TGTAAAATATCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCT
771 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* *
14509605 AATATAAGGGCCAAGTACCATCACCCATCGCACATCATGTGCACACACCTCCCCCGGCCCC
836 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCCGG-CCC
* * * * * * *
14509666 CCCGATCATCGGAACCCCAATACTGCCCGTTAGG-T-T----C--T-CT--GACGATGGTGCCCC
1 CCCGATC-GCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCC
* *
14509720 GACGAAGAAAAATGA-GGCACTAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAG-T
65 GACGAAGAAAAAT-ACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTT
* *
14509783 CTGGTCTGATCTTAGACTGGGAATGACCTCCGTATGC
129 CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
14509820 GTAAGCCAAC
Statistics
Matches: 3253, Mismatches: 441, Indels: 152
0.85 0.11 0.04
Matches are distributed among these distances:
891 98 0.03
892 4 0.00
893 98 0.03
894 476 0.15
895 199 0.06
896 493 0.15
897 165 0.05
898 344 0.11
899 224 0.07
900 335 0.10
901 2 0.00
902 32 0.01
903 4 0.00
904 2 0.00
905 2 0.00
906 1 0.00
907 1 0.00
908 2 0.00
909 1 0.00
911 1 0.00
912 2 0.00
915 4 0.00
916 4 0.00
917 199 0.06
919 1 0.00
920 90 0.03
921 468 0.14
922 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (893 bp):
CCCGATCGCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCG
ACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTCT
GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
ATCGGCCGAGTCCCCCTCTGCATGCTGCCGATCCTACTACCGCAACCCTCAGTCTGGTCTGATCT
TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCACTAC
GTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
CGGTTCGGGATTTTTTAAAATTTTTTCGAAGGAGATTTGGCCCCAAACTTGGTAGACATGATCCT
TGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
CATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
Found at i:14507119 original size:26 final size:26
Alignment explanation
Indices: 14507090--14507142 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14507080 CCGGTCCGAT
14507090 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14507116 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14507142 C
1 C
14507143 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14508010 original size:26 final size:26
Alignment explanation
Indices: 14507981--14508059 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
14507971 TTGATCCGAT
* *
14507981 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14508007 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14508033 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14508059 C
1 C
14508060 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.29, C:0.20, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:14508940 original size:26 final size:26
Alignment explanation
Indices: 14508904--14508954 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14508894 GGTCCAATCA
14508904 TAGACTAGGAATGAACTCCGTATGCT
1 TAGACTAGGAATGAACTCCGTATGCT
* *
14508930 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTAGGAATGAACTCCGTATGC
14508955 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCGTATGCT
Found at i:14510539 original size:26 final size:26
Alignment explanation
Indices: 14510501--14510553 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14510491 CTAGTTCGAT
* *
14510501 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
14510527 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
14510553 C
1 C
14510554 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14511448 original size:26 final size:26
Alignment explanation
Indices: 14511419--14511472 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
14511409 TCTGGTCCGA
* *
14511419 GCTTAGATTGGGAATGAACTCCGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
*
14511445 GCTTAGACTAGGAATGAACTCTGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
14511471 GC
1 GC
14511473 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
GCTTAGACTAGGAATGAACTCCGTAT
Found at i:14512375 original size:26 final size:26
Alignment explanation
Indices: 14512324--14512376 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14512314 CCGGTCCGAT
* * *
14512324 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAAACTGGGAATGAACTCTATATG
14512350 CTTAAACTGGGAATGAACTCTATATG
1 CTTAAACTGGGAATGAACTCTATATG
14512376 C
1 C
14512377 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.15, G:0.23, T:0.32
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCTATATG
Found at i:14513280 original size:26 final size:26
Alignment explanation
Indices: 14513230--14513282 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14513220 CTAGTCCTAT
*
14513230 CTTAGAATGGGAATGAACTTAGTATG
1 CTTAGAATGGGAATGAACTCAGTATG
* *
14513256 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCAGTATG
14513282 C
1 C
14513283 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.15, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCAGTATG
Found at i:14515900 original size:26 final size:26
Alignment explanation
Indices: 14515871--14515923 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14515861 CCGGTCTGAT
*
14515871 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14515897 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14515923 C
1 C
14515924 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14516799 original size:26 final size:26
Alignment explanation
Indices: 14516763--14516813 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
14516753 CGGTCTGATC
14516763 TTAGACTGGGAATGAACTCCATATGG
1 TTAGACTGGGAATGAACTCCATATGG
*
14516789 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCATATG
14516814 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.16, G:0.27, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGG
Found at i:14517230 original size:905 final size:900
Alignment explanation
Indices: 14509764--14517936 Score: 9546
Period size: 906 Copynumber: 9.1 Consensus size: 900
14509754 GCCTAGCATG
* * * * *
14509764 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGACCTCCGTATGCGTAAGCCAA
1 TGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14509829 CCGACGAAACGA---A-C--G-GGTGGGCGGGAACTGCGCCGGCTAGAGAGACGGGATGCACAAG
66 CCGACGAAACGAGCGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * *
14509887 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTAATATTTCTACATGCCAATGCTAT
131 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* * *
14509952 TCTTATGGCTTGTAAATACATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACG
196 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
** ** * *
14510017 ACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGTC-GTTCAGGATTTTTTGAAATTTTTT
261 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT-ACGGTTCAGGATTTTTT-AAAATTTTT
* * * * * *
14510081 TGAAAGGAGTTTTGGCACCAAACATGGTAGACATGATCCTTTTATTTTTGTTGGCATGCATAAAA
324 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
14510146 AAATTCAGCTAAAAACTCGAAGTTTACAAGATTTTGTGACTATTTGAAGAAAGTGTCCCCATTTC
389 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
14510211 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
454 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
14510276 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCGGCACCCATCGTACAT
519 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
14510341 CATGTGTGCACA-CCCCCCGG-CCCCCCGATCATCGGAACCCCAATACCACCGGTCAGGTTCTCC
584 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCA-CGGTCAGGTTCTCC
* * * * * *
14510404 AACGATGCT-CGGCTATGGTACCCCGACAAAGAAAAATGCGGCACCAGCACATGCTCGAGCCAAG
648 GACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * **
14510468 CATGTGCTGCCGTAACCATCGGTCTAGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
713 CATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * * * *
14510532 ACTAGGAATGAACTCCATATGCCTAAGTTAACCCACGAAATCAACGTGCGGGCGCTCAGCCGACC
777 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCC
* * * *
14510597 AGAGTGGCGGGATGCGCAAG-TCGGGGATCGGTCGGGTCCACCTCTGCATGTTGTCGATCC
842 A-AGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * * *
14510657 TGCTACCGTAACCCTCGGTCTGAT-TGGATCTTAGACTCGAAATGAACTCCGTATGCCTAAGCCA
1 TGCTGCCGTAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14510721 ATCGACGAAACGAGTCCGCGACGCGGGGCGG-GCGGCGTGTTGCACTACGTCGACCAGAGAGACG
65 ACCGACGAAACGA----GCGA-GC-GGGCGGCG-GGCG-G--GCACTACGCCGGCCAGAGAGACG
*** *
14510785 GGATGCGCAAGCCGTGGATCGGACTAGGGGTGGTAGGTGGGTTTTCACACATCTTCACATTTCTG
120 GGATGCGCAAGCCGTGGATC-GA-TA-GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
14510850 CTGTCCCAATGCCATTTTTATGGCCTTTGTAAATTCATTACATATGGTCCCTT-AGCCTTCACGT
182 C-GTGCCAATGCCATTTTTATGG-C-TTGTAAATTCA-TACA-ATGGTCCCTTAAGCCTTCACGT
* * *
14510914 GAAGGTTT-ATGGCAAGACGGCTTCGTTTTCTATTTTTCACGATTTTTTGAAAC-TTTTCCGG-T
242 GAA-GTTTCATGGCAAGACGAC-TCGTTTTCTATTTTTCATGA-TTTTTGAAACTTTTTACGGTT
* * * * *
14510976 CAAGATTTTTTAAAATTTTTTTCGGAAGCAGTTTTTGGCCGCAAACTAGGTAGACGTGATGCTTG
304 CAGGATTTTTTAAAA-TTTTTT-GGAAGGAG-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
*
14511041 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTTAAAACTCGAAGTGTACAAGATTTTGTGACCA
366 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
14511106 TTTGAAAAACGTGTCCCCATTTCAGACACTTTGATGGCTACTGGCAGCAAACCTGTAAAATCTCA
431 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * * * *
14511171 AATGATCTTTAAGGGGGTGTGAGTTCTCAAAGTTTGATGAGGGATAGGGGGCAAATAGAAGGGCC
496 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
14511236 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGTCGAAACCC
561 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCC
* * * * ** * *
14511299 CAATGTCACCGATCAGGTTCTCTGGCGATGCTCCTACGATGGTGTCCCGACGAAGAAAAATACGG
626 CAATGCCA-CGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGG
* * * * * * *
14511364 CACCAACACATGCCCAAGCCCAGCATGTGCTACCGCAACCCTCGGTCTGGTCCGAGCTTAGATTG
690 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTG
* *
14511429 GGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGA
755 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGA
* * * * *
14511494 GCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCTGAGGATAGGTCGGGTCCCCTT
820 GCGTGCGGGCGCTCAGCCGGCCA-AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCT
*
14511559 CTGCGTGCTGCCGATCC
884 CTGCATGCTGCCGATCC
* * * * * * ** **
14511576 TACTACCGTAACTCTTGGTTCAGTCCAATCTGCGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*** *
14511641 CCGACGAAACGAGC--G-GATAGACGGGCGGGCACTACGCCGGCCAGAGAGAC-GGACTGCGCAA
66 CCGACGAAACGAGCGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA-TGCGCAA
* * *
14511702 GCCGTGGATTGGTAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCGTGCCAATGCCA
130 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * * *
14511767 TTTTTATGGATTGTAAATTCATACAACGATCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAC
195 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
14511832 GACTCGTTTTCCACTTTTCACGATTTTTGAAACTTTTTATGGTTCAGGATTTTTTAACATATTTT
260 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAAT-TTTT
*
14511897 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTGTGGCATGCACAAA
324 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACAAA
* *
14511962 AAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTT
388 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
14512027 CACACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
453 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
14512092 GTTCTCAAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACA
518 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *** * * * * * * *
14512157 TCATTTGCGCACACCCCCCTCCCGAAACCCCCGATTGCCGAAACCCTAATACCGCCTGTCAGGTT
583 TCATGTGCGCACA--CCCC-CCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-ACGGTCAGGTT
* * *
14512222 CTCCGACGATGCTCCGGCGATAGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGC
644 CTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * **
14512287 CCAGCATGTGTTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTTGTATGCT
709 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* ** * ** *
14512352 TAAACTGGGAATGAACTCTATATGCCTAAGTCAACCCTCGAAACAAGCGTGCGGGCGCTCAGTCG
774 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCG
** * * * * * * *
14512417 GCCAGAGGGGCATGATTCGTAAGCCGGGGATCGATTGGGTCACCCTCT--ATGTTCTACCGATCC
839 GCCA-AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATG--CTGCCGATCC
* *
14512480 TGCTGCCGCAACCCTCAGTCCAGCCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTA
1 TGCTGCCG------T-A----A-CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * * * *
14512545 TGCGTAAGCTAACCGACG-AA--A-CGAGC--G-GGCGGGCGGGAACTGCGCCGGTCGGTGAGAC
54 TGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * * *
14512603 GGGATGCACAAGCCGTGGATCGATAGGGTGCTAGGTGGGTTTAGGCACATCTTAATATTTCTGCA
119 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCG
*
14512668 TGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
184 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * *
14512733 CGTGGCAAGACGACTCGTTTTCAATTTTTCATTA-TTTTGAAACTTTTTACGGTTCAGGATTTTT
249 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTT
* * * * *
14512797 TAAAATTTTTTTGAAAGGAGTTTTAGCACCAAACTTGGTTGACGTGATCCTTTTATTTTTGTTGG
314 TAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
*
14512862 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGT
378 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
**
14512927 GTCCCTGTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
443 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * *
14512992 GGGGGTTTGAGTTATCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGGCAAGTACCAGCAC
508 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * * *
14513057 CCACCGCACATCATGTGCGCACACCCCCGTCGG-CCCCCCGATCATCGGAACCCTAATACCGCCG
573 CCATCGCACATCATGTGCGCACACCCCC-CCGGCCCCCCCGATCGTCGGAACCCCAATGCC-ACG
* * * * * *
14513121 ATCAGGTTCT-CTAGCGATG-TTCGACTATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACA
636 GTCAGGTTCTCCGA-CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * ** *
14513184 TGCCCGAGCCAAGCATGTGCTGCCACAACCATCGGTCTAGTCCT-ATCTTAGAATGGGAATGAAC
700 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT-CTGATCTTAGACTGGGAATGAAC
** * *
14513248 TTAGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTACGGG
764 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGG
** * * * *
14513313 CGCTCAGCCAACCAGAGTGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTTCCCTTCTGCATGCT
829 CGCTCAGCCGGCCA-AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCT
*
14513378 GTCGATCC
893 GCCGATCC
* ** * * * *
14513386 TGCTACCGTAACCCTCAATCTGAT-TGGATCTTAGACTGGGAATGAACTCCATATGACTAAGCCA
1 TGCTGCCGTAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
14513450 ACTGATGAAACGCGCTAGCGGGCGGGCGGGCGTGCACTACGTCGGCCAGAGAGACGGGATGCGCA
65 ACCGACGAAACGAGCGAGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * **
14513515 AGCCGTGGATCGATAGGGTGGTAGGTGAGTTTTGCCACATCTTCATATTTCTATGTGCCAATGCC
129 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
* *
14513580 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTAAAGCCTTCACGTGAAGTTTCATGGGAAGA
194 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * ** * *
14513645 CAACTCGTTTTCTATTTTTCATTATTTTCAAAACTTTTTGCTGTTC-GAGATTTTTTAAAATTTT
259 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTT
* ** * *
14513709 TTAGGAAGGATTTTTGGCCCCAAACTTGGCGGACATGATCATTGTATTTTTGTTGGCATGCACAA
323 TT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * *
14513774 AAAATTTCATCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATT
387 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
14513839 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAACGAGGTGTG
452 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
14513904 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCAC
517 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * * *
14513969 ATCATGTGGGCATACCCCTTTCCGACCCCCCCGATAGTCGGAACCCCAATGCCGCTGGTTAGGTT
582 ATCATGTGCGCACACCCC--CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCAC-GGTCAGGTT
* * * * * * ** *
14514034 TTCCGACAATGCTCCAGCAATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCGTGAGA
644 CTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
*
14514099 CCAGTATGTGCTGCCGCAA-CC-C--T-C-G---G----T---CT--G---G---TCCG-AT-CT
709 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * * * *
14514138 TAGACTGAGAATGAACTCCGTATGCCTAAGTCAAACCATGAAACGAGCGTGAGGGCACTCAGCAG
774 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCG
* * * * *
14514203 GCCAGAGTGGCGGGATTCGCAAGCAGGGGATCGGTTGGGTCCCCCTCTGCATGCTGCCGATGC
839 GCCA-AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
*
14514266 TGCTGCCG--A-------T-C---C-GATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
1 TGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14514317 CCGACGAAACGAGCGA-------GCGGGTGGGCACTGCACCGGCCAAAGAGACGGGATGCGTAAG
66 CCGACGAAACGAGCGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * * * *
14514375 TCATGGATCGATAGGGTGGTACGTGGGTTTGGGCACATATTCATATTTTTGCGTGCCAATGCCAT
131 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* *
14514440 TTTTATGGCTTGTACATTCATACAATGG-CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATG
196 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
*
14514504 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTC
261 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTG
* * *
14514569 GAAAGATGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGAAATTTTGTTGGCATGCACAAAAA
326 GAAGGA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
14514634 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGAGTCCCCATTTCA
390 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14514699 GACACTTTAATGGCTACTGGCAGAAAACCTGTAAAATGTCAAAAGCTCTTTAAGGGGGTGTGAGT
455 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
14514764 TCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCCCACATC
520 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
14514829 ATGTGCGCACACCCCCCCGGCCCCCTCGATCCGTCGAAAACCCCAATGCCGCTCGGTCAGGTTCT
585 ATGTGCGCACACCCCCCCGGCCCCCCCGAT-CGTCG-GAACCCCAATG-C-CACGGTCAGGTTCT
* * * ** * *
14514894 -TGGCGATGCTCCGGTGATGGTGGCCCCGGTG-A-AAAAATTCAGGCACCAGGCACATGCCTGAG
646 CCGACGATGCTCCGGCGATGGT-GCCCCGACGAAGAAAAATGC-GGCACCA-GCACATGCCCGAG
* * * *
14514956 CCTAGCAATGTTCTGTCCGTAAACC-C--T-C-G---G----T---CT--G---G---TCCG-AT
708 CCCAGC-ATGTGCTG-CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
14514997 -CTTAGACTGGGAAATGAACTCCGTATGCCTAAGTCAACTCATGAAACGA--GTGCGGGCGCTCA
771 GCTTAGACTGGG-AATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCA
* * * * * * *
14515059 GTCGGCCAGAGGGGGCAGGATGCGCAAGCTGAGGATCGCTC-GGT-CCTCTGCGTGACTGTGGTT
835 GCCGGCCA-A-GGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCT-C-TG-C-AT-G-C
*
14515122 TGTCGATCC
892 TGCCGATCC
* * *
14515131 TACT-CCGTTAACCCTCGGT-CGATCT--T-TTAGCACTGAGGAATGAACTTCGTATGCCTAAGC
1 TGCTGCCG-TAACCCTCGGTCCGGTCTGATCTTAG-ACTG-GGAATGAACTCCGTATGCCTAAGC
* * * *
14515191 AAACCGATGAAACGAGCGAGC--G-GGTGGGCGGGCACTACGCCGGCC-GAAGGGACGGGATGCG
63 CAACCGACGAAACGAGCGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAG-AGAGACGGGATGCG
* * *
14515252 CAAGGCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCGGGGTGCCAATG
127 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
* *
14515317 CCATTTTTATGGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
192 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * ** * *
14515382 GACGGCTCATTTTCAATTTTTCATGATTTTCAAAACTTTTTGCGGTTAAGGATTTTTTAAAATTT
257 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTT
*
14515447 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCGTT-TATTTTTGTTGGCTTGCAC
322 TTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCAC
*
14515511 -AAAAAAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
385 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
*
14515575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAA-GGGGTG
450 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
14515639 TGAGTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGC
515 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
14515704 ACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCATCAGAACCCCAATGCCACCGGTTAGGTT
580 ACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCA-CGGTCAGGTT
* * * * *
14515769 CTCCGACGATGCTCCGGTGATGGTGCCCCGACGAAAAAAAATGTGGCCCCAGCACATGCCGGAGC
644 CTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * *
14515834 CCAGTATGTGCTGCCGGAACCCTTGGTCCGGTCTGATCTTATACTGGGAATGAACTCCGTATGCT
709 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* * *
14515899 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAATGAGCGTGCGGGTGCTCAACCG
774 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCG
*
14515964 GCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGT--CCC-C--C-T-CTG-CG----
839 GCCA-AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * *
14516015 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAGTGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14516080 CCGACGAAACGAGCGGGCAGGCGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCGC-AG
66 CCGACGAAACGAGCGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* *** * *
14516144 TCCGTAGATCGATAGGGTGGTAGGTGGGTTTAGGTGTATCTTCGTATTTCTGCATGCCAATGCCA
131 -CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * *
14516209 TTTTTATGGCTTGTTAATTCATACAATGCTCCCTTAAGTCTTCACGTGAAGTTTCATGGCAAGAC
195 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * ** **
14516274 GACTCGTTTTTTATCTTTCATGATTTACGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTT
260 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTT
* * * * * * *
14516339 CAGAAGGAGATTTGGCCCAAAAATTCGTAGACATGATCCTTGAATTTTTGTTGGCATGCAC-AAA
325 -GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
14516403 AAATTCAGCTAAAAAATCGAACG-GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAAATT
389 AAATTCAGCTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
14516467 CAGACACTTTAATGGCTACTGGCAGCAAACCTTTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
453 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
14516532 GTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCTGCACCCATCGCACA
518 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * ** *
14516597 TCGTGTGTGCACACCCCTACCCGGCCCCCCCGACCGCCGGAACTTCAATGCCACGGTCAGGTTAT
583 TCATGTGCGCACACCCC--CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACGGTCAGGTTCT
* * * * ** * *
14516662 CCGATGATGCTCCGACGATGGTGTCCCGAAGAAGAAAAATATGGCACCAACACATGCCCGGGCCC
646 CCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * *
14516727 AACATGTGCTGCCGCAACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGGTTA
711 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * *
14516792 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGAGTGCTCAGCCGGC
776 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGC
** ** * ** * *
14516857 C-AGGGGTAGGATGCATAAG-TCGAGGATCGACCGGATCCCCCTCTGCATGCTGCCAATCC
841 CAAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * *
14516916 TGCTGCCGTAACCATTGGTCCGGTCTGATCTTAGACTGTGAATGAACTCCGTATGTCTAAGCCAA
1 TGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
14516981 CTGACAAAACGAGTGAGCGGGCGGTTGGGCGGGTGGCACTACGTCGGCCAGAGAGTCGGGATGCA
66 CCGACGAAACGAGCGAGCGGGCGG-CGGGC--G-GGCACTACGCCGGCCAGAGAGACGGGATGCG
* * *
14517046 CAAGCCGTGGATCGATAGGGTGGTAGATGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATG
127 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
*
14517111 CCATTTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAA
192 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * *
14517176 GATGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
257 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAA-TT
* * * * *
14517241 TTTTGAAAGGATTTTTTGCCCCAAACTTAGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACA
321 TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * *
14517306 AAAAAATTTAGCTAAAAACTCAAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
386 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
14517371 TTCAAACACTTTAAAGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTCAAGGGGGTGT
451 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
14517436 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
516 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
14517501 CATCATGTGCGCACACACACCCGGCCCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTC
581 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-ACGGTCAGGTTC
* * * * * * *
14517566 TCCGGCGATGGTGCGGCAATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCTCGAGCC
645 TCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * * *
14517631 CAGCAAGTGCTACCGTAACCCTCGGTCCGATCCGATCTTCA-ACTGGGAATGAACTCTGTATGCT
710 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTT-AGACTGGGAATGAACTCCGTATGCT
* * *
14517695 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGCCA
774 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCG
** * *
14517760 GCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCTGAACC
839 GCCA-AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * * * *
14517823 TACTTCTGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* ** *
14517888 CCGATGAAAC-A---AGCGGGCGGGCGGGCCAGCACTACGCCGGCTAGAGAGA
66 CCGACGAAACGAGCGAGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGA
14517937 TCAAGCCCAG
Statistics
Matches: 6235, Mismatches: 832, Indels: 419
0.83 0.11 0.06
Matches are distributed among these distances:
855 12 0.00
856 16 0.00
857 368 0.06
858 151 0.02
859 13 0.00
860 28 0.00
861 53 0.01
862 36 0.01
863 1 0.00
864 4 0.00
865 10 0.00
866 48 0.01
867 1 0.00
871 1 0.00
874 2 0.00
875 11 0.00
876 13 0.00
877 77 0.01
878 38 0.01
879 10 0.00
880 220 0.04
881 234 0.04
882 140 0.02
883 8 0.00
884 12 0.00
885 9 0.00
886 40 0.01
887 6 0.00
888 13 0.00
889 398 0.06
890 89 0.01
891 188 0.03
892 32 0.01
893 68 0.01
894 50 0.01
895 5 0.00
896 3 0.00
897 1 0.00
898 57 0.01
899 289 0.05
900 109 0.02
901 111 0.02
902 190 0.03
903 313 0.05
904 319 0.05
905 464 0.07
906 482 0.08
907 185 0.03
908 10 0.00
909 38 0.01
910 215 0.03
911 86 0.01
912 205 0.03
913 21 0.00
914 2 0.00
915 18 0.00
916 97 0.02
917 44 0.01
918 301 0.05
919 269 0.04
920 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
TGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTG
GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACGGTCAGGTTCTCCGAC
GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
GTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAAGG
GGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCC
Found at i:14518018 original size:26 final size:26
Alignment explanation
Indices: 14517981--14518032 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14517971 TGGTCTGATA
14517981 TTAGACTAGGAATGAACTCCGTATGC
1 TTAGACTAGGAATGAACTCCGTATGC
*
14518007 TTAGAC-AGGGAATGAACTCTGTATGC
1 TTAGACTA-GGAATGAACTCCGTATGC
14518033 CTAAGTCAAG
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.31, C:0.17, G:0.25, T:0.27
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCGTATGC
Found at i:14518195 original size:313 final size:313
Alignment explanation
Indices: 14517627--14518225 Score: 810
Period size: 313 Copynumber: 1.9 Consensus size: 313
14517617 CACATGCTCG
* * * *
14517627 AGCCCAGCAAGTGCTACCGTAACCCTCGGTCCGATCCGATCTTCAACTGGGAATGAACTCTGTAT
1 AGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGATCCGATATTCAACTAGGAATGAACTCCGTAT
*
14517692 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAG
66 GCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAG
* * ** * **
14517757 CCAGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCTGAAC
131 CCAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCAGGTCCCCCTCTGCATGCTGCTGAAC
* * **
14517822 CTACTTCTGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
196 CTACTACCGCAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
*
14517887 ACCGATGAAACAAGCGGGCGGGCGGGCCAGCACTACGCCGGCTAGAGAGATCA
261 ACCGATGAAACAAGCGGACGGGCGGGCCAGCACTACGCCGGCTAGAGAGATCA
* ** * * *
14517940 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATATT-AGACTAGGAATGAACTCCGTA
1 AGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGATCCGATATTCA-ACTAGGAATGAACTCCGTA
* * * * *
14518004 TGCTTAGACAGGGAATGAACTCTGTATGCCTAAGTCAAGCCATGAAACGAGCGTGTGGGCGCTCA
65 TGCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCA
* * *
14518069 GCC-GACTAGAGGGGCGGGATGCGTAAGCCGAGGATCGACCAGGTCCCCCTCTGCATGCT-ATCG
130 GCCAG-CCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCAGGTCCCCCTCTGCATGCTGCT-G
* * *
14518132 ATCCTGCTACCGCAACCCTTGGTAC-GGTCCAATCTTAGATTGGGAATGAACTCCGTATGCCTAA
193 AACCTACTACCGCAACCCTTGGT-CTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* *
14518196 GCCAACTGATGAAACGAGCGGACGGGCGGG
257 GCCAACCGATGAAACAAGCGGACGGGCGGG
14518226 TGGGCCGACA
Statistics
Matches: 246, Mismatches: 36, Indels: 8
0.85 0.12 0.03
Matches are distributed among these distances:
312 3 0.01
313 242 0.98
314 1 0.00
ACGTcount: A:0.24, C:0.28, G:0.29, T:0.20
Consensus pattern (313 bp):
AGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGATCCGATATTCAACTAGGAATGAACTCCGTAT
GCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAG
CCAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCAGGTCCCCCTCTGCATGCTGCTGAAC
CTACTACCGCAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
ACCGATGAAACAAGCGGACGGGCGGGCCAGCACTACGCCGGCTAGAGAGATCA
Found at i:14518920 original size:26 final size:26
Alignment explanation
Indices: 14518884--14518936 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14518874 CTGGTTCGAT
*
14518884 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
*
14518910 CTTAGATTGGGAATGAACTCAGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
14518936 C
1 C
14518937 CCAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCAGTATG
Found at i:14520710 original size:26 final size:26
Alignment explanation
Indices: 14520659--14520710 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
14520649 CCGATCTGAT
*
14520659 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14520685 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
14520711 ATTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14520967 original size:894 final size:895
Alignment explanation
Indices: 14517940--14532602 Score: 8925
Period size: 891 Copynumber: 16.2 Consensus size: 895
14517930 AGAGAGATCA
* * * *
14517940 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATATTAGACTAGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * *
14518005 GCTTAGACAGGGAATGAACTCTGTATGCCTAAGTCAAGCCATGAAACGAGCGTGTGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * * *
14518070 CCGACTAGAGGGGCGGGATGCGTAAGCCGAGGATCGACCAGGTCCCCCTCTGCATGCT-ATCGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
* * * *
14518134 CCTGCTACCGCAACCCTTGGTAC-GGTCCAATCTTAGATTGGGAATGAACTCCGTATGCCTAAGC
196 CCTGCTGCCGCAACCCTCGGT-CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * * * * *
14518198 CAACTGATGAAACGAGCGGACGGGCGGGTGGGCCGACACTACGTC-ATCCAGAGAGACGGGATGC
260 CAACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGC
* * *
14518262 ACAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAAT
325 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
** * *
14518327 GATATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCA
390 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* *
14518392 AGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAAT
455 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT-ACGGTTCAGGATTTTTTAAAAT
* * *
14518456 TTTTT-GGAAAAGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTCTATTTTTGTTGGCATGC
519 TTTTTCGG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
14518520 ACAAAAAAATTCAAG-TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
583 ACAAAAAAATTC-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
14518584 CCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTGAAATGCTCTTTAAGGGG
647 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * *
14518649 GTGTGAGTTC-CTAAGGTTTGATGAGAGATAGGGGGCCAGTATAAGGGCCAAGTACTAGCACCCA
712 GTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * *
14518713 TCGCACATCTTGTGCGCACACCCCCTTGGCCGCCCCGATCGTCGGAACCCCAATACCGTCGGTCA
776 TCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCG-CGGAACCCCAATGCCGTCGGTCA
* *
14518778 GGTTCTCTGACGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCC
840 GG----CTG-C--T-CT--GGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCC
14518843 G
895 G
* *
14518844 AGCCCAGCATGTGCTACCGCAACCCTCGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTA
* * * * * * * * *
14518908 TGCTTAGATTGGGAATGAACTCAGTATGCCCAAGTCAACACACGAAATGAACGTGTGGGTGGTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * *
14518973 G-CGACCAGAGGGGCTGG-TGCACAAGCCGAGGATTGGTCGGGTCCCCCTCTACGTGCTGC-CGA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGA
** * ** * * * *
14519035 TCCTATTGTCGTGACCCTTGGACTGGTCTGATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGC
195 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
14519100 CAACCAACGAAACGA----G-CTA---GCGGGCGGGCACTACGGCGA-CCAGAGAGACGGGATGC
260 CAACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGC
* * * *
14519156 GCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTGGGCATATCTTCATATTTCTGCATGCCAAT
325 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
*
14519221 GGCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
390 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* ** * * *
14519286 AGACGACTTGTTTTCTATTTTTCACGATTTTCAAAACGTTTTGCGGTTCGGGATTTTTTAAAATT
455 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATT
* * * *
14519351 TTTTCGGATGGAGTTTTGGCCCCAAACTTGGTTGACATGATCCTTGTATTTTTGTTGGCATGCAA
520 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
14519416 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCA
585 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
14519480 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCAATGCTC-TTCA-------
650 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
14519537 --A--TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGC
715 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14519598 ACATCTTGTGCGCACACCCCCCCGGCCCCCCCCATCGTCAGAACCCCAATGTCGTCAGTCAAGTT
780 ACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCG-CGGAACCCCAATG-C--C-GTC--G--
* * * * * * * *
14519663 CTCCGGTGATGCTCCGACGATGGTGCCCCGATGAAGAAAAAT-ACAGCATCAGCACATGCCCG
836 GT-CAG-GCTGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGA-GGCACCAGCACATGCCCG
* * ** * * **
14519725 AACCCAGCATGTACTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGTAAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14519790 GCTTAGA-TGAGGTATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTTCGGGCGCTCA
66 GCTTAGACTG-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
*** ** * * * * * *
14519854 ATAGGCCAGAGGGGCGGGATGCATAAGCTGAGGATCAACCGGGTACCCTTCTGCGTGCTG-TCGA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGA
* * *
14519918 TCCTGCTACCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
195 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* ** * * * * *
14519983 CAACCGACGAAACGAGCGGGTGGGCGGGAGGGCGAGTACTACGTCGA-CGAGAGAGACGGGATGC
260 CAACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGC
* * *
14520047 GCAAGCCATCGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
325 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
*
14520112 GCAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
390 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * *
14520177 AGATGACTCGTTTTCTATTTTTCATGATTTTTGAAA-TGTTTTGCGGTTCAGGATTTTTTTAAAT
455 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT-TTTTACGGTTCAGGATTTTTTAAAAT
* *
14520241 TTTTTCAGAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
519 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * *
14520306 CAAAAAAATTCAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAACAGTGTCCCT
584 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
14520371 GTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTATAATCTCAAATGCTCTTTAAAGGGGT
649 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
14520436 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAGCACCCATCG
714 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * *
14520501 CACATCATGTGCGCACACCCCCCCTAGCCCCCCCGATCGCAGAAACCCCAATGTCGTCGGTCAGG
779 CACATCATGTGCGCACA-CCCCCCTGGCCCCCCCGATCGC-GGAACCCCAATGCCGTCGGTCAGG
* * * * *
14520566 CT-CTCTGGCGATGGTGCCCCGATGACGAAAAATGAGACACCAACACATGCTCG
842 CTGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCCG
* * *
14520619 AGCCCCGCATGTGCTGCCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
** ** * * * *
14520684 GCTTAGACTGGGAATGAACTCTATATGATTAAGTCAACCCATGAAACGAGCGTACAGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
14520749 CAGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTACATGCTGCT-GAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
* * * * *
14520813 CCTGCTGTCGGAAGCCTCGGTCTGGTCCGATCTTAGACTGGGAACGAACTCCGTGTGCCTAAGCC
196 CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
14520878 AATCGACGAAACGAGTGGGCCGACGGGCTGGCGGGCACTACGCCGAG-CAGAGAGACGGGATGCG
261 AACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGCG
*
14520942 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATG
326 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
* * *
14521007 CCATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGATGTTTCATGTCAA
391 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * ** * **
14521072 GACGACTCATTTTCTATTTTTCATGATTTTTGAAAAGTTTTACGGTTCGGGATTTTTTTTAATTT
456 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTT
* *
14521137 TTTTGGAAGGAGTTTTGGTCCC-AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
521 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
14521201 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
586 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
14521266 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTATAATCTCAAATGCTCTTTAAGGGGGTGT
651 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
14521331 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGGCCAAGTACTAGCACCCATCGC
716 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT-AAGGGCCAAGTACCAGCACCCATCGC
* *
14521396 ACATCATATGCGCACA-CCCCCTGGCCCCCCCGATCGTCGGAACCCCGATGCCGTCGGTCAGG-T
780 ACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCG-CGGAACCCCAATGCCGTCGGTCAGGCT
* * * ** *
14521459 TCTCCGGTGATGGTGCCCCGGTGAAGAAAAAT-ACGGCACCAACACATGCCCG
844 GCTCTGGCGATGGTGCCCCGACGAAGAAAAATGA-GGCACCAGCACATGCCCG
* *
14521511 AGCCCAGCATGTGCTACCACAA----C---CC--TC-GA--TT---C---G-AT---CT--G-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * * * *
14521551 -CTTAGACTGGGAATGAACTCTGTATGACTAAGTGAACTCACGAAATGAGCGTGCGGGTGCTTAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* ** * * *
14521615 CAGGCCAGAGGGGCAAGATGCGCAAGCTC--GGATCGGTCGGGTCCCCCTTTGTGTGCTG-TCGA
131 CCGGCCAGAGGGGCGGGATGCGCAAGC-CGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGA
* * * *
14521677 TCCTGCTGCCGCAACCCTCGGTGC-GATCCAATCTTAGACTGGGAATGAAGTCTGTATGCCTAAG
195 TCCTGCTGCCGCAACCCTCGGT-CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
14521741 CCAATCGACGAAACGAGCGGG-CGAACGGGCTGGCGGGCACTACGCCG-GCCAAAGAGACGGGAT
259 CCAACCGACGAAACGAGTGGGCCG-ACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGAT
* * **
14521804 GCGCAGGCCGTGGATCGATAGGGTGGTAGATGGGTTTAGGCACATCTTCATATTTCTATGTGCC-
323 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
*
14521868 A--CCATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
388 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
**
14521931 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGTTCAGGATTTTTTAAAA
453 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAA
** *
14521996 -TTTTTCGGAAATTACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
518 TTTTTTCGG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * *
14522060 CACAAAACAATTTAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
582 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
14522125 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGG
647 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
14522190 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCAG
712 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
14522255 CGCACATCATGTGTGCACACCCCTC-GG-CCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAA
777 CGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATC-GCGGAACCCCAATGCCGTCGGTC-A
* * ** * *
14522318 GTTCTCCAACGATGCTCCGGCGATGGTGCCTTGAAGAAGAAAAATGCA-GCACCAGCACATACTC
840 G---------GCTGCTCTGGCGATGGTGCCCCGACGAAGAAAAATG-AGGCACCAGCACATGC-C
14522382 CG
894 CG
* * *
14522384 -GCCCAGCATGTGCTGCTCTGGAACCCTCAGTCCGGTCCGATCTTAGAC------TG------G-
1 AGCCCAGCATGTGCTGC-C-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
*
14522435 --G----GAC-----ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGATGCGTGC-GGCGTC
64 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA-GCGTGCGGGCG-C
* * * * ** *
14522488 TCA-CCGGCCCAGTATGGACGGGATGCGCAAGGCCAGGGATCG-CCGGGTCCCCC-CTTTGTGTT
127 TCAGCCGG-CCAG-AGGGGCGGGATGCGCAA-GCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * *
14522550 GCTACCGAT-CTACAGCCACCAACCCTCGGTCCGGTCTGATC-TAGACTTAGGAATGAACTCCGT
189 GCT--CGATCCTGCTGCC-GCAACCCTCGGTCTGGTCCGATCTTAGAC-TGGGAATGAACTCCGT
* * * * * * * * ** * **
14522613 -TACCT-A-CCAACCGAAGAAATGAGCGGG-CGGCGGACGGATC--G-ATTA-GGGGTGGTAG-G
250 ATGCCTAAGCCAACCGACGAAACGAGTGGGCCGACGGGCGG-GCGGGCACTACGTCGAGCCAGAG
* ** * * ** * ** * *** * * * *
14522669 TG--GGTTTTG-GCCA-CCAT-CTTC-ATA--TTCTTACCGT--GCCCATGC-CATTTTTATGGC
314 AGACGG-GATGCGCAAGCCGTGGATCGATAGGGTGGTA-GGTGGGTTTAGGCACATCTTCAT--A
* * * * * * * * * *
14522723 TTGTAAATTCAT-ACAATGGTCC---CTTAAGCCTTCATGTGAAGTTTCATGGCAAGAGGACTCA
375 TT-T--CTGCGTGCCAAT-G-CCATTTTTATGGC-T--TGT-AA-ATTCAT-ACAA-TGG--TC-
** * *** * *** * * **
14522784 TTTTGTATTTTTCAC---AA-TTT--TTG-AA-ACTTTTTGTGGTTCGGTATTTCTT-A--AAAT
425 CCTT-AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT-TTTC--TATTT-TTCACGATTT
* *
14522838 TT-----T--TT-CGG--AAGGA-GTTTT---A------C------A--------CCCAAACTTG
485 TTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
** * * *
14522869 GTAGACAAGATGCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAATTCGAAGTGTA
550 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * * *
14522934 CAAGATTTTGTGACCATTTG-AAAAAGTGTCCCTATTTCAAACACTTTACTGGCTACTGGCAACA
615 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
14522998 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
680 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
14523063 GGCCAATACAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCTCCCCGG-CCC
745 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCTGGCCCC
* * * * * * ** *
14523127 CCCGATCATCGGAACCCCAATGCCATCGGTTAGG-TTCTCCGACGATGGTTTCCC-AGTGAAGAA
809 CCCGATC-GCGGAACCCCAATGCCGTCGGTCAGGCTGCTCTGGCGATGGTGCCCCGA-CGAAGAA
*
14523190 AAAT-ACGGCACCAGCACATGCCTG
872 AAATGA-GGCACCAGCACATGCCCG
* *
14523214 AGCCCAGCATGTGCTGTCGTAA-CC-C--T-C-G---G----T---CT-GG--T---CT--G-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
*
14523254 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGACACGAGCGTGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14523318 CCGGCCAGAAGGGTGGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCGCTACGTGCTG-TCGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
* * * *
14523382 CCTGCTGTCGTAACCCTCAGG-CTGGTCTGATCTTAGACTGGGAATGAACTCCTTATGCCTAAGC
196 CCTGCTGCCGCAACCCTC-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
14523446 CAACCGACGAAACGAGCGGGCGGGCGGGCGGACGGGCGGGCACTACGTCG-GCCAGAGAGACGAG
260 CAACCGACGAAACGAGTGGGC---C-GACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGG
* *
14523510 ATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGC
321 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGC
* *
14523575 CAATGGCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCAT
386 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
14523640 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAA
451 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAA
* * * * * * * *
14523705 AATTTTTTTGAAAGGATTTTTGGTCCCAAACTTCGTAAACATGATCATTGTATTTTTGTTGGCAT
516 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
*
14523770 GCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
581 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
14523835 CCCATTTCAGACACTTTAATGGCTATTGGCAGCAATCCTGTAAAATCTCAAAT-CTTCTTTAAGG
646 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC-TCTTTAAGG
14523899 GGGTGTGAGTTCTCGAGGTTTGATGA-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
710 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * **
14523963 ATCACACATCATGTACG--CA------T----------AT---GGAACCCCAATGCCACCGGTCA
775 ATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCGGAACCCCAATGCCGTCGGTCA
*
14524007 GG-TTCTCTGGCGATGGTGCCCCGAC-AAGGAAAAATGCA-GCACCAGCACATGCCCG
840 GGCTGCTCTGGCGATGGTGCCCCGACGAA-GAAAAATG-AGGCACCAGCACATGCCCG
* * * ** * * *
14524062 AGCCCAACTTGTGCTGCCGCAACCCTCGGTCCGATCAAAACTTAAACTGGGAATGAA-TCAGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
14524126 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACCATGAAACGAGCGAGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * *
14524191 CCGCCCAAAGGGGAGGG-T-CGATCAAGCCGGGAATC-AGCCGGGTCCCCCTCTGCGTCCTAC-C
131 CCGGCCAGAGGGGCGGGATGCG--CAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTGCTGCTC
* * ** * * * * *
14524252 GATCCTACTACCATAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTACGCTTAG
193 GATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA-
** * ** ** * *** * ** ** *
14524317 ATTGGGAATTAACTCCGTATGCCTAAGTTAACCCACAAAACGAACCTGCGGGCGCT-CAGTCG-G
257 A---GCCA--ACCGACG-A-AAC-GAG-T-GGGC-C--GACGGGCGGGCGGGCACTAC-GTCGAG
* * * * * * * * ** * *
14524380 CCAGAGGGGCAGGATGTGTAAGTCGGGGATCGATCGGGTTCCCCTCTACGTGCTGTCGATCCTAC
308 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG-T----GGTA-G-G-TG--GGT-TTA-
* * ** *** * * * *** * **
14524445 TGTCACAACCATTGGTCCGGTCCGATCTTAGACTACGAATG-AACTCCGTAT-GCTAAGCCAA--
361 -GGCAC-ATC-TTCAT-ATTTCTG--CGT-G-C--C-AATGCCA-TTTTTATGGCT-TGTAAATT
** * * **** *** ** * * * * * ** ** *
14524506 CCGACGAAACGAG-CGCGCGGGCGGGCGGGCCGACA-CTACGTCGGCCAGA-GAAACGGGATGCG
413 CATAC--AATG-GTCCCTTAAGCCTTCACG-TGA-AGTTTCAT-GGCAAGACGACTC-GTTTTC-
* ** ** * ** ** * * * ** * * * *
14524568 CA---AGC-CG-TGGATCGATAAGGTGGTAGGTGAGTTTAGCCACATCTTCATATTTTTGCATGC
470 TATTTTTCACGAT-TTTTGA-AACTTTTTA--CG-GTTCAG-GATTTTTTAAAATTTTTTC--G-
* * * * * ** * * * * *** *
14524628 CAATGCCATTTTTATGGCTTCTAAA-TTCATACA-ATGGTCCCTTAAGCCTTCACGTGAAGTT-T
526 GAA-G-GA-GTTT-TGGC-CCCAAACTTGGTAGACGTGAT-CCTT--G---T-A-TTTTTGTTGG
* * ** * * **** * ** * **
14524690 CAT-AACAAGACGACTCATTTTCTATTTTTCACGATTTTTGA-AACTTTTTGCGGTTCGA-CATT
578 CATGCACAAAAAAATTCA---GCTA-AAAACTCGAAGTGT-ACAAGATTTT---G-T-GACCATT
*** * * * * *** * * *
14524752 TTTTAAAA-T-T----TTTTCGAAAGGATTTTTAACCCCAAACTTGGTAGACATGATCCTTGTAT
633 TGAAAAAAGTGTCCCCATTTC-AGA-CA-CTTTAATGGC-TAC-TGGCAG-CA--AACC-TGTA-
*** * *** * *** ****** * *** ** * * * ** * *
14524811 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAGCTCGCTGTGT-A-CA-AGATTTTGTGACCA
688 AAAT-CTCAAATGCTCTTTAAGGGGGTG-TGAGTTCTCGAGGTTTGATGAGGGA-TAGGGGGCC-
* * * ** * ** * * * ** **
14524873 TTTAATAAAAAGTGTCCCCA-TTTCAACACTTTAACG-GC-T-ATG-GCAGCA-A-ACCTGTAAA
749 ---AAT-ATAAG-G-GCCAAGTACCAGCAC-CCATCGCACATCATGTGC-GCACACCCCCCT-GG
*** * ** ** *** ** * * * * * *
14524931 AATCTCAAAT-GCTCTAAGGGC-ATGTGAGTC-TTGAGGTTTG-ACTGAG-GATAGG-G-GCCAA
805 CCCCCCCGATCGC-GGAACCCCAATG-CCGTCGGTCAGG-CTGCTCTG-GCGAT-GGTGCCCCGA
* *** * * **
14524989 CATAAGGGCCAA-GTACCAGCACCCGCAACAT-CATG
865 C-GAA-GAAAAATG-A--GGCACCAGC-ACATGCCCG
* *** * * * * * * ** * *** * **
14525024 -GCGCA-CACCCCGCGGCCCTCGATCATCGAGAACCCAATCCGCGGTCAGGTTTGGCG-ATG--C
1 AGCCCAGCA-TGTGCTG-CCGCAACCCTCG-G--TCCGGTCTGATCTTA-GACTGG-GAATGAAC
* * * * * ** * **** *
14525084 TCTCGTGTAAC-CAGATGCTCGGCCAGTTGTGCTGCCG-ATCGACACCAA-TCAGATGGGC-AAG
59 TC-CGTAT-GCTTAGA--CT-GG-GA-ATGAACT-CCGTAT-G-C-CTAAGTCA-ACCCACGAAA
* * * * ** * * *** * ****
14525145 CCATGC-T-CGAGCCAGTCTCTGCCACGTAATTAGAAGGCTCCATTGCCTAAGTCAACCCACAAA
112 CGA-GCGTGCG-GGC-G-CTCAGCC-GGCCA-GAG-GGGCGGGA-TG-C---G-CAAGCCGGGGA
* * * * * ** * *** ** * * ** * *
14525208 ACGAGT-GTGTGGCCGCTCAGCCGACCAGGGGGA-CGGGATG-CGCTAGCTGGGGATCGGCCGGG
164 TCGA-TCGGGT-CCCCCTCTG-CGTGCTGCTCGATCCTGCTGCCGC-AAC----CCTCGGTCTGG
** * *** * * ** * * * * **
14525270 TCC-CCCTTTG--TGTGCTGTCGATCTTGCCACTGCAACCCTCGATCTAATCCGATCTTAGATTG
221 TCCGATCTTAGACTG-GGAAT-GAAC-T--C-C-GTATGCCT-AAGCCAA-CCGA-C-GA-AACG
* * ** * * *
14525332 GGAATGAACTCAGTATGCCTCAGCCAACCGACGAAACAAGCAGGCGGGTGGGCTGGCGGGCGGGC
274 AG--TG------G---G-C-C-G---A-CG--G------GCGGGC-GG-GCACT-AC-GTCGAGC
** * * * * *
14525397 TTGCAG-G-CGGGCACTGCGTCGGCCAGAG-AGAGGGATGCGCA-AGCCGCGG-ACCGATAGGGT
309 CAG-AGAGACGGG-A-T--G-C-G-CA-AGCCG-TGGAT-CG-ATAG-GGTGGTA--GGT-GGGT
* **** * ** * * *
14525457 GGTAGGTGGGT-TT-AGGCACATCTTCATATTTCTGCATGCCAATGTCATTTTTATGGCTTGTAA
358 -TTAGGCACATCTTCA--TATTTCTGCGT----------GCCAATGCCATTTTTATGGCTTGTAA
*
14525520 ATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
410 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * ** * *
14525585 TTCATGATTTTTAAAACTTTTTGGGGTTCAGGATTTTTAAAAATTTTTTCAGAAGGAGTTTTGG-
475 TTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
* * * *
14525649 GCCAAACTTGGTTGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAATTTCAGCTAAAAAC
540 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* * * *
14525714 TCGAAATCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCTTTTCAGAGACTTTAATGGCT
605 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* *
14525779 ACTGGCAGAAAACCTGTAAAATCTCAAATGCT-TTTGAAGGGGGTGTGAGGTCTCGAGGTTTGAT
670 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGAT
14525843 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
734 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * *
14525908 CCTTAGCCCCCCCGATCGCTGGAACCCCAATGCTGCCGGTCAGGTTCTCCAGCGATGCTCTGGCG
799 CCCTGGCCCCCCCGATCGC-GGAACCCCAA---TGCC-GTC-GG---T-CAG-GCTGCTCTGGCG
* *
14525973 ATGGTGCCCCGACGAAGAAAAAT-ACGGCACCAACA-ATGCCTG
853 ATGGTGCCCCGACGAAGAAAAATGA-GGCACCAGCACATGCCCG
* * *
14526015 AGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
14526080 GCTT-GCACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG-AACGAGTGTGCTGGTGCTCA
66 GCTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * ** * * * * * * * *
14526143 GTCGACCAAAGGGGCAAGATGCACAAGAC-GGGATCGACCGAGTCCCCTTCTACGTGCT-ATCAA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGA
* * * * *
14526206 TCCTGCTGCTGCAA-CATTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
195 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
14526270 CAACCGATG-AA--A-T--G-AG-CGGACGGGCGGGCATTACG-CCAGCCAGAGAGACGGGATGC
260 CAACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGC
* *
14526326 GCAAGCCGTGGATCGATAGGGTGCTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
325 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
* *
14526391 GCCATTTTTATGGCTTATAAATTCATACAATGGTCGCTTAAGCCTTCACGTGAAGTTTCATGGCA
390 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * **
14526456 AGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGGTCAAGATTTTTT-TCATT
455 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATT
*
14526520 TTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GCATGCAC
520 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
*
14526584 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCA
585 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
14526649 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAATTGCTCTTTAAGGGGGTG
650 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * *
14526714 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCTAAGTACCAGCTCCCATTG
715 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC-AAGTACCAGCACCCATCG
* * * *
14526779 CACATCATGTGCGCACAACCACCCC-GG---CCCCTATCACCGAAACCCCAACGCCGTCGGTCAG
779 CACATCATGTGCGCAC-ACC-CCCCTGGCCCCCCCGATC-GCGGAACCCCAATGCCGTCGGTCAG
* * * *
14526840 GTTCTCTGATGATGCTTCGACGATGGTGCCCCGACAAAGAAAAATGCA-GCACCAGCGCATG-CC
841 G----C---TGCT-C-T-GGCGATGGTGCCCCGACGAAGAAAAATG-AGGCACCAGCACATGCCC
*
14526903 T
895 G
* ** *
14526904 ATGCCCAGCATGTGCTGCCGCAACCCTTGGTCCGGTCTGATCTTAGACTTTGAATGAACTCCATA
1 A-GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
14526969 TGCTTAGACTGGCAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * *
14527034 CCCAGCTAGAGGGGCGGGATGCGTAAGCCAGGGATCGATCGGGTCCCCCTCTGCATGCT-ATCGA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGA
* * * *
14527098 TCCTGCTGCCACAACCCTTGGTCTGGTCTGATCTTAGACGGGGAATGAACTCCGTATGCCTAAGC
195 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
** * * * * **
14527163 CAACCGATAAAACGA-------G-CGGGCGGGCGAGCACTACATCGA-CCAAAAAGATAGGATGC
260 CAACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGC
*
14527219 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGTC-TGCCAA
325 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-CGTGCCAA
* * *
14527283 TGCCATTTTTAGGGCTTGTAAATTCATATAATGGTCCCTTAAG-CTTGCACATGAAGTTTCATGG
389 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT-CACGTGAAGTTTCATGG
* ** ** **
14527347 CCAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTTGGGATTTTTTAAAA
453 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAA
* * *
14527412 TTTTTTTGGAAGGAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTTTATTTTTGTTGGCATGC
518 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* *
14527477 ACAAAATAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCC
583 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * *
14527542 CATTTCAAACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTAAAATGCTCTTCAAGGGGG
648 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
14527607 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
713 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
14527672 GCACATCATGTGCGCACACACACCC-GG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
778 GCACATCATGTGCGCACAC-CCCCCTGGCCCCCCCGATCG-CGGAACCCCAATGCCGTCGGTCAG
* * * * *
14527735 G-TTCTCCGACGATGGTGCCCCTATGAAGAAAAAT-ACGGCACCAGCACATGCCCG
841 GCTGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGA-GGCACCAGCACATGCCCG
*
14527789 AGCCCAGCATGTGCTGCCGCAACCCTCGGT----AC-GATC-----C----AAT---CT---TA-
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
14527833 GATT-G--T--GAATGAACTCTGCATGCCTAAGTCAACCCACGAAATGAGCGTGCCGGCTCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14527893 TCGGCCAAAGGGGCGGGATGCGCATGCCGGGGATCGATCGGGTCCTCCTCTACGTGCT-TTCGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
* * * * * *
14527957 CCTACTGCCGCAACCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTCGACT
196 CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC--CTA-A
** * ** * *** * ** * *
14528022 GGGAA-TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACAGGTGCTC-A-GCCG-GC
258 GCCAACCG-A---CG-A-AAC-GAGT--GGGC-CG--ACGGGCGGGC-GG-GCACTACGTCGAGC
* * ** * ** * * ** * *
14528083 CAAAGGGGTGGGAAGCATAAACCGAGGATCGACT-GGGTCCCCCCCTACGTGCTACCGATCCTGC
309 CAGAGAGACGGGATGCGCAAGCCGTGGATCGA-TAGGGT-----GGTA-G-G-T--GGGT--T--
* * * * * ** ** *** * **
14528147 TACTGCA-ACCCTCAGTCTGGTCTGATCTTAGACTGGGAAT-AAACTCCGTATGCCTATGCCAA-
359 TA-GGCACATCTTCA-TAT-TTCTG--C---G--TGCCAATGCCA-TTTTTATGGCT-TGTAAAT
* *** ** * ** *** *
14528209 -CAAACGAAATGAGT-GGGTGGGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATC
412 TCATAC--AATG-GTCCCTTAAGC-CT---TC-ACGTGA-AG-TTTCATG-GCAAGAC---GA-C
* * * * * *
14528272 AATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA-TATTTCTATGTACCAATGCCATTTTTATGG
462 --T--CGT--T---T---TCT----A-TTTTTCACGATTT-T-TG-A--AA---C-TTTTTACGG
* * ** * * ** * *** *
14528336 CTT--GTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCGAGACGACTCGT
501 -TTCAG-GATTTTTTAAAAT--T-T-TT---TC-GGAAG-G-AGTTT--TGGCCCCA-AACT--T
** * ** ** * * **** ***
14528399 TTTATATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGG
549 GGTAGA-----CGTGATCCTTG-TA-TTTTT---GTT-GGCA-TGCACAAAA-AAATTC---A--
* * * ** * * *
14528464 GGTATTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG-GCATGTAGAAAAAAAT-T
596 GCTA---A----AAAC-TCG-A-A-GTG-TACAAG-A-TTTTG-TGACCAT-TTGAAAAAAGTGT
* ** * ** * * * * * ** *** * *
14528527 CAGCTCAAAACTCGAAGTGTACAAGATTTTGTGACGATTTG-A-AAAAAGTGTCCCCATTTCAGA
645 C--C-C-CATTTC--A--G-AC-A-CTTTAATGGCTACTGGCAGCAAACCTGT-AAAATCTCAAA
* * ** * * *
14528590 --CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTGTTT-AAG-GGGGT-GTG
698 TGCTCTTTAA-GG-----GG--G------TGTGAGTTCTC-GA-G--GTTTGATGAGGGATAG-G
** * * * *
14528650 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCCATCGTA
744 -GGGC-CAA----T-AT-----A-A--GGGCCAA-GT-A---CC-AGCACC--CATCGCA-CAT-
* * * * *
14528714 CATCATGTGCACACACCCCCCCGGCCCCCCCCGATCATCGGAACCCTAACGTCGCCGGTCAGGTT
784 CAT-GTGCGCA--CACCCCCCTGG-CCCCCCCGATC-GCGGAACCCCAA--T-GCC-GTC-GG--
* * * * * *
14528779 CTCCGACGATGCTCCGACGATGGTGCCTCGACGAAGAAAAAT-ACGGCACCAGCACATGCCCT
837 -T-C-AGGCTGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGA-GGCACCAGCACATGCCCG
* * * * * *
14528841 AGCCCAGCATGTGCTACCGCAACCATCGGTCTGATTTGATCTTAGACTGGGAATGAACTCAGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
14528906 GCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCACTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14528971 CCGGCTAGAGGGGCGGGATACGCAAGCCGGGGATCGGTTGGGTCCCCTTCTACGTGCTGC-CGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
* * * * * *
14529035 CCTGCTGCCGCAACCCTCGATCCGGTCCAATTTTAGACTAGGAATGAACTCTGTATGCCTAAGCC
196 CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* **
14529100 AACCGATGAAACGA-------G-CGGGCGGGCGAACACTACGTCGA-CCAGAGAGACGGGATGCG
261 AACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGCG
* *
14529156 CAAGCCGTTGATCGATAGGGTGGTAGGTGTGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
326 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
14529221 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
391 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * *
14529286 GATGACTCGTTTTCCATTTCTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTT-AAATTT
456 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTT
* * * *
14529350 TTTC-GAAGGTGTTTTGGCCGCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCAAGCACA
521 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
14529414 AAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCAT
586 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
14529479 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAGAATCTCAAATGCTTTTTAAGAGGGTGT
651 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
14529544 GAGTTCTTGAGGTTTGATGAGGAATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
716 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
14529609 CATCATGTGCG--CACCCCTC-GGCACCCTCGATCGTCGGAACCCCAATGTCGCCAATCAGGTTC
781 CATCATGTGCGCACACCCCCCTGGCCCCCCCGATCG-CGGAACCCCAA--T-GCC-GTC-GG---
* * * * * *
14529671 TCCGACGATGCTCCGGTGATGGTGCCCTGACGAAGAAAAATGAGGCACCAACACATGCCCG
837 T-C-AGGCTGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCCG
* ** * * ** *
14529732 AGCCCAGCATGAGCTATCGTAACCCTAGGTCCGGTCCAATCTTAGACTGGGAATGAACTCTGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14529797 GCTTAGACTGGGAATGAACTCCGTACGCCTAAGTCAACCCACGAAAGGAGCGTGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14529862 CCGGCCAGAGGGGCGAGATGCACAAGCCAGGGATTGGTCGGGTCCCCCTCTGCGTGCTAC-CGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
* * * * * ** * * *
14529926 CTTGCTACTGCAACTCTCAGTCCAGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCAAAGCC
196 CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * * * * * * *
14529991 CCCCGA-TAAA--A-TGAGCAGGCGGGCGGGCAGGCACTACGCCG-GCCAGAGAGACGGGATGCA
261 AACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGCG
* *
14530051 CAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
326 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
*
14530116 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAA
391 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
*
14530181 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT-ACGGATTTTTTAAAATT
456 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCA-GGATTTTTTAAAATT
* * *
14530245 TTTTCGGATGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCAC
520 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
14530310 AAAAAAATTTAGCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
585 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
*
14530375 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGCTG
650 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* **
14530440 TGAGTTCTCAAGGTTTGATGAGGGATAAAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
715 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
14530505 ACATCATGTGTGTACACCCTCCC-GGCCCCCCCGATCACCGGAACCCCAACCCTGCCGGTCAGGT
780 ACATCATGTGCGCACACCC-CCCTGGCCCCCCCGATC-GCGGAACCCCAA---TGCC-GTC-GG-
* * * * * * * * *
14530569 TCTCCGACGATGCTCCGACGATGGTGCCCTGACGAAGACAAATGCGGCACCTGCACATGCTCG
837 --T-C-AGGCTGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCCG
* * *
14530632 ACCCCAGCATGTGCTGCCGCAACCGTCGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTA
* *
14530696 TGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * *
14530761 ACCGGCTAGAGGGGCGGGATACGCAAGCCGGGGATCGGTCGGGTCCCCTTCTGCGTGTTGC-CAA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGA
* * * * * * *
14530825 TCTTGCTGCTGCAACCCTTGATCCGGTCC-ATTTTTAGACTAGGAATGAACTCCGTATGCCTAAG
195 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
14530889 CCGACCAACG-AA--A-T--G-AG-CGGGCGGGCGAGCACTACGTCGA-CCAGAGAGACGGGATG
259 CCAACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATG
*
14530945 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAA
324 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
14531010 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
389 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* *
14531075 AAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTT-AAAT
454 AAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAAT
* **
14531139 TTTTTTGGAAGGAGTTTTGGCTGCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
519 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
14531204 CAAAAAAATTCAGCTAAAAATTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
584 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
14531269 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAGAATCTCAAATGCTTTTTAAGGGGGT
649 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
14531334 GTGAGTTCTCGAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
714 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
14531399 CACATCATGTGTG--CACCCCCC-GGCCCTCCCGATCATCGGAACCCCAATGCTGTCGGTCAGG-
779 CACATCATGTGCGCACACCCCCCTGGCCCCCCCGATC-GCGGAACCCCAATGCCGTCGGTCAGGC
* * ** * *
14531460 TTCTCGGTGATGCTCCGATGATGGTGCCTCGATAAAGAAAAATGCGGCACCAACACATGCCCG
843 TGCTC--TG--G---C---GATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCCG
* *** * * *
14531523 AGCCCAGCATGTGCTGCCGTAACCCTCGGTCTAATCCGAGCTTAGACTGGGAATGAACTCTGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14531588 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGTTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
** ** *
14531653 CCGGCCAGAGGGGCGGGATGCGCAAGCTAGGGATCGGCCGGGTCCCCCTCTG-GTGCTAC-CGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
* * * * * * * * *
14531716 TCTGCTGGCACAACCCTCAGTCTGATCCAATCTTACACTGGGAATGAACTCTGTATGCCTAAACC
196 CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
14531781 AGCCGACGAAACGAGTGAACGGGCG-GGCGGCGGGCGGGCACTACGCCG-GCCAGAGAGACGGAA
261 AACCGACGAAACGAGTG---GGCCGACG-GGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGA
* * * * * *
14531844 TGCGTAAGCCGTGAATCAATAGGGTGGTAGGTGGGTTT-GGCACATCTTCATATTTTTGCATTCC
322 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
* *
14531908 AATGCCATTTTTATGGCTTGTAAATTCATAGAATGGTCCCTTAAACCTTCACGTGAAGTTTCATG
387 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * * * ** *
14531973 GCAAGACGACTCATTTTCTATTTTTCACGGTTTTCGAAACCTTTTACGGTTTGGGATTTTCTAAA
452 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAA
* * * *
14532038 ATTTTTTCGGAAGGATTTTTGGCCCCATACTTGGTAGACATTATCCTTGTATTTTTGTTGGCATG
517 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* ** *
14532103 CACAAAAAAACTCAATTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCC
582 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
14532168 CCATTTCAAACACTTTAATGGTTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTCTAAGGGG
647 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
14532233 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCAT
712 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
14532298 TGCACATCATGTGCGTACA-CCCCCTGGCCCCCCCGATCTCCGGAA-CCCAATGCCGCCGATCAG
777 CGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATC-GCGGAACCCCAAT---GCCG-TC-G
* * * ** * * *
14532361 GTTCTCAGGCGATGCTCCGACGATGGTGCCCTGACGAAGAAAAAT-ACGATACCAACAGATGCTC
836 G---TCAGGC--TGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGA-GGCACCAGCACATGCCC
14532425 G
895 G
* * ** * * * * * **
14532426 AGCCCAGCATTTACTATCGTAACCCTCAGTCCAGCCTGATCTTATACTGCAAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
14532491 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGTGGGCGGGCAC
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC--GT--GCGGGCGC
* * * * * *
14532556 TACA-CCGGCCAGAGAGACGGGATGCGCACGTCGTGGATCGATAGGGT
127 T-CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT
14532603 GGTAGGTGGG
Statistics
Matches: 10716, Mismatches: 2066, Indels: 1951
0.73 0.14 0.13
Matches are distributed among these distances:
813 1 0.00
816 2 0.00
817 1 0.00
820 1 0.00
822 3 0.00
823 36 0.00
824 26 0.00
825 27 0.00
826 40 0.00
827 43 0.00
828 2 0.00
829 10 0.00
830 9 0.00
831 63 0.01
832 4 0.00
833 13 0.00
834 13 0.00
835 9 0.00
836 15 0.00
837 13 0.00
838 5 0.00
839 8 0.00
840 161 0.02
841 97 0.01
842 38 0.00
843 9 0.00
844 3 0.00
846 3 0.00
847 6 0.00
848 79 0.01
849 4 0.00
850 3 0.00
852 3 0.00
853 1 0.00
856 1 0.00
858 152 0.01
860 4 0.00
861 44 0.00
862 172 0.02
863 211 0.02
864 13 0.00
865 210 0.02
866 86 0.01
867 13 0.00
868 7 0.00
869 5 0.00
870 150 0.01
871 104 0.01
872 64 0.01
873 162 0.02
874 20 0.00
875 16 0.00
876 45 0.00
877 31 0.00
878 50 0.00
879 25 0.00
880 69 0.01
881 300 0.03
882 33 0.00
883 155 0.01
884 73 0.01
885 13 0.00
886 12 0.00
887 11 0.00
888 10 0.00
889 56 0.01
890 360 0.03
891 1058 0.10
892 246 0.02
893 548 0.05
894 962 0.09
895 686 0.06
896 238 0.02
897 257 0.02
898 7 0.00
899 15 0.00
900 460 0.04
901 342 0.03
902 125 0.01
903 182 0.02
904 203 0.02
905 49 0.00
906 37 0.00
907 60 0.01
908 15 0.00
909 11 0.00
910 20 0.00
911 5 0.00
912 9 0.00
913 12 0.00
914 6 0.00
915 6 0.00
916 12 0.00
917 14 0.00
918 9 0.00
919 1 0.00
920 9 0.00
921 4 0.00
922 17 0.00
923 5 0.00
924 16 0.00
925 6 0.00
926 15 0.00
927 7 0.00
928 4 0.00
929 7 0.00
930 13 0.00
931 3 0.00
932 11 0.00
933 10 0.00
934 4 0.00
935 24 0.00
936 18 0.00
937 10 0.00
938 8 0.00
939 7 0.00
940 9 0.00
941 24 0.00
942 10 0.00
943 2 0.00
944 2 0.00
945 13 0.00
946 11 0.00
947 1 0.00
948 3 0.00
949 5 0.00
950 2 0.00
951 7 0.00
952 2 0.00
953 9 0.00
954 3 0.00
955 4 0.00
956 10 0.00
957 6 0.00
958 12 0.00
959 14 0.00
960 14 0.00
961 23 0.00
962 26 0.00
963 12 0.00
964 2 0.00
965 13 0.00
966 27 0.00
967 14 0.00
968 16 0.00
969 10 0.00
970 1 0.00
971 11 0.00
972 8 0.00
973 18 0.00
974 12 0.00
975 10 0.00
976 3 0.00
977 4 0.00
978 11 0.00
979 8 0.00
980 22 0.00
981 19 0.00
982 16 0.00
983 19 0.00
984 33 0.00
985 27 0.00
986 21 0.00
987 21 0.00
988 30 0.00
989 25 0.00
990 28 0.00
991 24 0.00
992 22 0.00
993 11 0.00
994 35 0.00
995 27 0.00
996 21 0.00
997 14 0.00
998 16 0.00
999 12 0.00
1000 2 0.00
1001 2 0.00
1002 8 0.00
1003 15 0.00
1004 12 0.00
1005 3 0.00
1006 1 0.00
1007 1 0.00
1008 3 0.00
1010 10 0.00
1011 17 0.00
1012 18 0.00
1013 19 0.00
1014 17 0.00
1015 32 0.00
1016 15 0.00
1017 11 0.00
1018 4 0.00
1019 6 0.00
1020 3 0.00
1021 3 0.00
1022 2 0.00
1023 7 0.00
1024 315 0.03
1025 308 0.03
1026 342 0.03
1027 244 0.02
1028 192 0.02
1029 253 0.02
1030 459 0.04
1031 368 0.03
1032 313 0.03
1033 200 0.02
1034 202 0.02
1035 209 0.02
1036 319 0.03
1037 218 0.02
1038 241 0.02
1039 203 0.02
1040 190 0.02
1041 199 0.02
1042 178 0.02
1043 152 0.01
1044 207 0.02
1045 106 0.01
1046 95 0.01
1047 105 0.01
1048 100 0.01
1049 103 0.01
1050 114 0.01
1051 291 0.03
1052 531 0.05
1053 190 0.02
1054 559 0.05
1055 314 0.03
1056 594 0.06
1057 160 0.01
1058 103 0.01
1059 418 0.04
1060 269 0.03
1061 32 0.00
1062 25 0.00
1063 40 0.00
1064 46 0.00
1065 99 0.01
1066 41 0.00
1067 41 0.00
1068 38 0.00
1069 83 0.01
1070 24 0.00
1071 33 0.00
1072 25 0.00
1073 181 0.02
1074 43 0.00
1075 54 0.01
1076 31 0.00
1077 27 0.00
1078 198 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTCGAT
CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
AACCGACGAAACGAGTGGGCCGACGGGCGGGCGGGCACTACGTCGAGCCAGAGAGACGGGATGCG
CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTT
TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
CATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCGGAACCCCAATGCCGTCGGTCAGGCTGC
TCTGGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCCG
Found at i:14524130 original size:25 final size:26
Alignment explanation
Indices: 14524102--14524153 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
14524092 CCGATCAAAA
14524102 CTTAAACTGGGAATGAA-TCAGTATG
1 CTTAAACTGGGAATGAACTCAGTATG
* *
14524127 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCAGTATG
14524153 C
1 C
14524154 CTAAGTCAAA
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 16 0.67
26 8 0.33
ACGTcount: A:0.31, C:0.17, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCAGTATG
Found at i:14524442 original size:185 final size:185
Alignment explanation
Indices: 14524102--14524490 Score: 428
Period size: 185 Copynumber: 2.1 Consensus size: 185
14524092 CCGATCAAAA
* *
14524102 CTTAAACTGGGAATGAA-TCAGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACC
1 CTTAGACTGGGAATGAACTCAGTACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACC
** * *
14524166 ATGAAACGAGCGAGCGGGCGCTCAGCCGCCCAAAGGGGAGGGTCGATCAAGCCGGGAATCAGCCG
66 ACAAAACGAACCAGCGGGCGCTCAGCCGCCCAAAGGGGAGGGTCGATCAAGCCGGGAATCAGCCG
* * * * *
14524231 GGTCCCCCTCTGCGTCCTACCGATCCTACTACCATAACCCTTGGTCTGGTCTGAT
131 GGTCCCCCTCTACGTCCTACCGATCCTACTACCACAACCATTGGTCCGGTCCGAT
* * * * *
14524286 CTTAGACTGGGAATGAACTCTGTACGCTTAGATTGGGAATTAACTCCGTATGCCTAAGTTAACCC
1 CTTAGACTGGGAATGAACTCAGTACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACC
* * * * * *
14524351 ACAAAACGAACCTGCGGGCGCTCAGTCGGCCAGAGGGGCAGGATGT-G-T-AAGTCGGGGATC-G
66 ACAAAACGAACCAGCGGGCGCTCAGCCGCCCAAAGGGG-AGG--GTCGATCAAGCCGGGAATCAG
* * * ** **
14524412 ATCGGGTTCCCCTCTACGTGCTGTCGATCCTACTGTCACAACCATTGGTCCGGTCCGAT
128 -CCGGGTCCCCCTCTACGTCCTACCGATCCTACTACCACAACCATTGGTCCGGTCCGAT
**
14524471 CTTAGACTACGAATGAACTC
1 CTTAGACTGGGAATGAACTC
14524491 CGTATGCTAA
Statistics
Matches: 169, Mismatches: 31, Indels: 9
0.81 0.15 0.04
Matches are distributed among these distances:
184 17 0.10
185 145 0.86
186 4 0.02
187 1 0.01
188 2 0.01
ACGTcount: A:0.24, C:0.27, G:0.26, T:0.22
Consensus pattern (185 bp):
CTTAGACTGGGAATGAACTCAGTACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACC
ACAAAACGAACCAGCGGGCGCTCAGCCGCCCAAAGGGGAGGGTCGATCAAGCCGGGAATCAGCCG
GGTCCCCCTCTACGTCCTACCGATCCTACTACCACAACCATTGGTCCGGTCCGAT
Found at i:14528157 original size:185 final size:185
Alignment explanation
Indices: 14527839--14528199 Score: 476
Period size: 185 Copynumber: 2.0 Consensus size: 185
14527829 CTTAGATTGT
* * * * *
14527839 GAATGAACTCTGCATGCCTAAGTCAACCCACGAAATGAGCGTGCCGGCTCTCAGTCGGCCAAAGG
1 GAATGAACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTACAGGCTCTCAGCCGGCCAAAGG
* * ** * * * ** *
14527904 GGCGGGATGCGCATGCCGGGGATCGATCGGGTCCTCCTCTACGTGCTTTCGATCCTACTGCCGCA
66 GGCGGGAAGCACAAACCGAGGATCGATCGGGTCCCCCCCTACGTGCTACCGATCCTACTACCGCA
* *
14527969 ACCCTC-GATCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTCGACTGG
131 ACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATAAACTCCGTATGCTTCGACTGG
*
14528024 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACAGG-TGCTCAGCCGGCCAAAG
1 GAATGAACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTACAGGCT-CTCAGCCGGCCAAAG
* * * *
14528088 GGGTGGGAAGCATAAACCGAGGATCGA-CTGGGTCCCCCCCTACGTGCTACCGATCCTGCTACTG
65 GGGCGGGAAGCACAAACCGAGGATCGATC-GGGTCCCCCCCTACGTGCTACCGATCCTACTACCG
14528152 CAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATAAACTCCGTATGC
129 CAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATAAACTCCGTATGC
14528200 CTATGCCAAC
Statistics
Matches: 151, Mismatches: 22, Indels: 6
0.84 0.12 0.03
Matches are distributed among these distances:
184 2 0.01
185 148 0.98
186 1 0.01
ACGTcount: A:0.23, C:0.29, G:0.27, T:0.21
Consensus pattern (185 bp):
GAATGAACTCCGCATGCCTAAGTCAACCCACGAAACGAGCGTACAGGCTCTCAGCCGGCCAAAGG
GGCGGGAAGCACAAACCGAGGATCGATCGGGTCCCCCCCTACGTGCTACCGATCCTACTACCGCA
ACCCTCAGTCTGGTCTGATCTTAGACTGGGAATAAACTCCGTATGCTTCGACTGG
Found at i:14528917 original size:26 final size:26
Alignment explanation
Indices: 14528881--14528933 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14528871 CTGATTTGAT
*
14528881 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACTGGGAATAAACTCAGTATG
*
14528907 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCAGTATG
14528933 C
1 C
14528934 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCAGTATG
Found at i:14529984 original size:891 final size:892
Alignment explanation
Indices: 14527968--14532583 Score: 6183
Period size: 895 Copynumber: 5.2 Consensus size: 892
14527958 CTACTGCCGC
* * *
14527968 AACCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACT-TCGTATGCTTCGACTGGGAATGAAC
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCT-GTATGCTTAGACTGGGAATGAAC
* * * * * *
14528032 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACAGGTGCTCAGCCGGCCAAAGGGGTGGGAA
65 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
** * * * * * *
14528097 GCATAAACC-GAGGATC-GACTGGGTCCCCCCCTACGTGCTACCGATCCTGCTACTGCAACCCTC
130 GCGCAAGCCAG-GGATCGGTC-GGGTCCCCCTCTGCGTGCTACCGATCTTGCTGCTGCAACCCTC
* * * * * ** *
14528160 AGT-CTGGTCTGATCTTAGACTGGGAATAAACTCCGTATGCCTATGCCAACAAACGAAATGAG-T
193 AGTCCTGTTC-AATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCG
* * *
14528223 GG-GTG-G-GCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAG
257 GGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
** *
14528285 GTGGGTTTAGGCACATCTTCATATTTCTATGTACCAATGCCATTTTTATGGCTTGTAAATTCATA
322 GTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
14528350 CAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCGAGACGACTCGTTTTATATTTTTCACGA
387 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * * *
14528415 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGGGTATTGACCCCAAAC
452 TTTTTGAAACTTTTTACGGTTCAGGATTTTTT-AAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * *
14528480 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTAGAAAAAAATTCAGCTCAAAACTCGAAGT
516 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
14528545 GTACAAGATTTTGTGACGATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
581 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
14528610 GCAAACCTGTAAAATCTCAAATGCTGTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATA
646 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * *
14528675 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCACACACCCCCCCGGCC
711 AGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG--CGCA-CCCCCCGG-C
* * *
14528740 CCCCCCGATCATCGGAACCCTAACGTCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTG-
772 CCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGC
* * *
14528804 CCTCGACGAAGAAAAAT-ACGGCACCAGCACATGCCCTAGCCCAGCATGTGCTACCGC
837 CCT-GACGAAGAAAAATGA-GGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGT
* * ** * *
14528861 AACCATCGGTCTGATTTGATCTTAGACTGGGAATGAACTCAGTATGCTTAGACTGGGAATAAACT
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
* * * * *
14528926 CCGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCACTCAGCCGGCTAGAGGGGCGGGATA
66 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * * *
14528991 CGCAAGCCGGGGATCGGTTGGGTCCCCTTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTC-GA
131 CGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTGCTGCAACCCTCAG-
* * * * * *
14529055 TCCGGTCCAATTTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGC
195 TCCTGTTCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGC
* * *
14529120 GGGCGAACACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTTGATCGATAGGGTGGTAGGTG
260 GGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
14529185 TGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
325 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * *
14529250 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCCATTTCTCACGATTT
390 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * *
14529315 TTAAAACTTTTTACGGTTCAGGATTTTTTAAATTTTTTC-GAAGGTGTTTTGGCCGCAAACTTGG
455 TTGAAACTTTTTACGGTTCAGGATTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * *
14529379 TAGACGTGATCCTTGTATTTTTTTTGGCAAGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTAC
520 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
14529444 AAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * * * *
14529509 ACCTATAGAATCTCAAATGCTTTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAGGAATAAGGG
650 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGG
* * *
14529574 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCCCTCGGCACCCTCGA
715 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCCCCCGGCCCCCCCGA
* * ** **
14529639 TCGTCGGAACCCCAATGTCGCCAATCAGGTTCTCCGACGATGCTCCGGTGATGGTGCCCTGACGA
780 TCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGACGA
* *
14529704 AGAAAAATGAGGCACCAACACATGCCCGAGCCCAGCATGAGCTATCGT
845 AGAAAAATGAGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGT
* * *
14529752 AACCCTAGGTCCGGTCCAATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
* * *
14529817 CCGTACGCCTAAGTCAACCCACGAAAGGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATG
66 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * *
14529882 CACAAGCCAGGGATTGGTCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTACTGCAACTCTCAGT
131 CGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTGCTGCAACCCTCAGT
* * * ** ** *
14529947 CCAGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCAAAGCCCCCCGATAAAATGAGCAGGCG
196 CCTGTTCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCG
* * *
14530012 GGCGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGAGTGGTAG
261 GGC--G-A-GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
14530077 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
322 GTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
14530142 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACGACTCGTTTTCTATTTTTCATGA
387 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
*
14530207 TTTTTGAAACTTTTTACGGTT-ACGGATTTTTTAAAATTTTTTCGGATGGAGTTTTGGCCCCAAA
452 TTTTTGAAACTTTTTACGGTTCA-GGATTTTTT-AAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * *
14530271 CTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACTCAAAG
515 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
*
14530336 TGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
580 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* *
14530401 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCAAGGTTTGATGAGGGAT
645 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* *
14530466 AAAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGTACACCCTCCCGGC
710 AAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACCC-CCCGGC
* *
14530531 CCCCCCGATCACCGGAACCCCAA-CCCTGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTG
772 CCCCCCGATCATCGGAACCCCAATGCC-GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTG
* * ** * * * *
14530595 CCCTGACGAAGACAAATGCGGCACCTGCACATGCTCGACCCCAGCATGTGCTGCCGC
836 CCCTGACGAAGAAAAATGAGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGT
* * * *
14530652 AACCGTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATAAACT
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
* * * *
14530717 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAACCGGCTAGAGGGGCGGGATA
66 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * *
14530782 CGCAAGCCGGGGATCGGTCGGGTCCCCTTCTGCGTGTTGCCAATCTTGCTGCTGCAACCCT-TGA
131 CGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTGCTGCAACCCTCAG-
* * * * * *
14530846 TCCGGTCCATTTTTAGACTAGGAATGAACTCCGTATGCCTAAGCCGACCAACGAAATGAGCGGGC
195 TCCTGTTCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGC
*
14530911 GGGCGAGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
260 GGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
14530976 GGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
325 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
*
14531041 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
390 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * **
14531106 TTAAAACTTTTTACGGTTCAGGATTTTTTAAATTTTTTTGGAAGGAGTTTTGGCTGCAAACTTGG
455 TTGAAACTTTTTACGGTTCAGGATTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
14531171 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAATTTGAAGTGTAC
520 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
14531236 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * * *
14531301 ACCTATAGAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGAATAGGGG
650 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGG
* *
14531366 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACCCCCCGGCCCTCCCGA
715 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCCCCCGGCCCCCCCGA
* * ** * **
14531431 TCATCGGAACCCCAATGCTGTCGGTCAGGTTCT-CGGTGATGCTCCGATGATGGTG-CCTCGATA
780 TCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCT-GACG
* *
14531494 AAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGT
844 AAGAAAAATGAGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGT
** *
14531543 AACCCTCGGTCTAATCCGAGCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
* *
14531608 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGTTCAGCCGGCCAGAGGGGCGGGATG
66 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * *
14531673 CGCAAGCTAGGGATCGGCCGGGTCCCCCTCTG-GTGCTACCGAT-TCTGCTGGC-ACAACCCTCA
131 CGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCT-TGCT-GCTGCAACCCTCA
* * * * * *
14531735 GT-CTGATCCAATCTTACACTGGGAATGAACTCTGTATGCCTAAACCAGCCGACGAAACGAGTGA
194 GTCCTG-TTCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-TG-
* * * * * *
14531799 ACGGGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGAATGCGTAAGCCGTGAATCAAT
253 A---GC--G-GGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* * *
14531864 AGGGTGGTAGGTGGGTTT-GGCACATCTTCATATTTTTGCATTCCAATGCCATTTTTATGGCTTG
312 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTG
* * *
14531928 TAAATTCATAGAATGGTCCCTTAAACCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTA
377 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * ** * *
14531993 TTTTTCACGGTTTTCGAAACCTTTTACGGTTTGGGATTTTCTAAAATTTTTTCGGAAGGATTTTT
442 TTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTT-TTAAATTTTTTCGGAAGGAGTTTT
* * * * **
14532058 GGCCCCATACTTGGTAGACATTATCCTTGTATTTTTGTTGGCATGCACAAAAAAACTCAATTAAA
506 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
14532123 AACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATG
571 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * *
14532188 GTTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTCTAAGGGGGTGTGAGTTCTCGAGGTTTG
636 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
*
14532253 ATGAGGGAT-AGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGTACA
701 ATGAGGGATAAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CA
* * * *
14532317 CCCCCTGGCCCCCCCGATC-TCCGGAA-CCCAATGCCGCCGATCAGGTTCTCAGGCGATGCTCCG
763 CCCCCCGGCCCCCCCGATCAT-CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCG
** * * * * *
14532380 ACGATGGTGCCCTGACGAAGAAAAAT-ACGATACCAACAGATGCTCGAGCCCAGCATTTACTATC
827 ACGATGGTGCCCTGACGAAGAAAAATGA-GGCACCAACACATGCCCGAGCCCAGCATGTGCTACC
14532444 GT
891 GT
* ** * ** *
14532446 AACCCTCAGTCCAG-CCTGATCTTATACTGCAAATGAACTCCGTATGCTTAGACTGGGAATGAAC
1 AACCCTCGGTCTGGTCC-GATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAAC
* * * * * *
14532510 TCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGTGGGCGGGCACTACA-CCGGCCAGAGAGAC
65 TCCGTATGCCTAAGTCAACCCACGAAACGAGC--GT--GCGGGCGCT-CAGCCGGCCAGAGGGGC
14532574 GGGATGCGCA
125 GGGATGCGCA
14532584 CGTCGTGGAT
Statistics
Matches: 3285, Mismatches: 382, Indels: 98
0.87 0.10 0.03
Matches are distributed among these distances:
889 3 0.00
890 62 0.02
891 539 0.16
892 53 0.02
893 213 0.06
894 11 0.00
895 706 0.21
896 229 0.07
897 449 0.14
898 3 0.00
899 7 0.00
900 469 0.14
901 317 0.10
902 23 0.01
903 166 0.05
904 3 0.00
905 2 0.00
907 28 0.01
908 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (892 bp):
AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
CGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTGCTGCAACCCTCAGT
CCTGTTCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCG
GGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
TGAAACTTTTTACGGTTCAGGATTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCCCCCGGCCCCCCCGAT
CATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGACGAA
GAAAAATGAGGCACCAACACATGCCCGAGCCCAGCATGTGCTACCGT
Found at i:14530708 original size:26 final size:26
Alignment explanation
Indices: 14530672--14530724 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14530662 CTGGTTCGAT
*
14530672 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14530698 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14530724 C
1 C
14530725 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:14531598 original size:26 final size:26
Alignment explanation
Indices: 14531562--14531615 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
14531552 TCTAATCCGA
*
14531562 GCTTAGACTGGGAATGAACTCTGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
14531588 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
14531614 GC
1 GC
14531616 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
GCTTAGACTGGGAATGAACTCCGTAT
Found at i:14533232 original size:26 final size:26
Alignment explanation
Indices: 14533203--14533255 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14533193 CCGGTCCGAT
14533203 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
** *
14533229 CTTAGTTTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14533255 C
1 C
14533256 CTAAGTAAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.17, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14535020 original size:26 final size:26
Alignment explanation
Indices: 14534982--14535034 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14534972 CCGGTCTGAT
* *
14534982 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14535008 CTTAGACTAGGAATGACCTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14535034 C
1 C
14535035 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14535360 original size:876 final size:868
Alignment explanation
Indices: 14532492--14536651 Score: 4758
Period size: 876 Copynumber: 4.7 Consensus size: 868
14532482 ACTCCGTATG
* *
14532492 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT--G-A-----GCGGG-TGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAAC-AAATGAGCAGGCGGGCGGGACGG
* * * *
14532548 GCGGGCACTACACCGGCCAGAGAGACGGGATGCGCACGTCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
14532613 TTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
14532678 GTCCCCTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACTCGTTTTCCATTTTTCACGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * *
14532743 GAAACTTTTTACGGTTCGAAAATTTTTTAAAATTTTTTTGGAAGGTGTTTTGGCCCCAAACTTGG
260 GAAACTTTTTACGGTTCG-AGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
14532808 TAGACGTGATCCTTATATTTTTGTTGGCATGCACAAAAAAATCAGCTAAAAACTCGAAGTGTACA
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATCAGCTAAAAACTCAAAGTGTACA
* ** * *
14532873 AGATTTTGTTATTATTTGAAAAAAGTGTCCCCAGTTCAGACACTTTAATGGCTACTGGCAGCAGA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
14532938 CCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* *
14533003 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGTGTGCACACCCCCCCGGCCCCCCC
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GCCCCCCC
* ** *
14533068 GATCGCCAGAACCCCAATGCCATCGATCAGGTTCTCCGACGATGCTCTGGCGATGGTGCCCCGAC
582 GATCGCGA-AACCCCAATGCCGCCGGTCAGGTTCTCCGACGA-----T-GC-ATGGTGCCCCGAC
* * *
14533133 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATATGCTGCCGTAACCCTTGGTCCGGT
639 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
** * *
14533198 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGTTTGGGAATGAACTTCGTATGCCTAAGTA
704 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* *
14533263 AACCCACGAAACGAGCGGGCGGGCGGTCAGCCGACCTGAGGGATGGGATGCGTAAGTCGGGGATC
769 AACCCAC--AACGTGCGGGC--GC--TCAGCCGGCC----------GA--CG-AA------GAT-
* ** * ** * * * *
14533328 GGTCGGGTCCCCCTCTGTGTGCTACCGATCCTGCTATCGTAACCCT-TGGGCTGGGTCTGAT
808 GATCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCAGGCCT-GGTCCGAT
* * * * *
14533389 CTTAGA-TCGGGATTGAACTCCGTATGCCTATGCCAACCGAC----GA--A-ACGAGC-GGACGG
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCAACCAACAAATGAGCAGGCGGGCGGGACGG
* * ** *
14533445 GCGGGCACTACGCCGACCAAAGAGATAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * * ** * *
14533510 TTAAGTCACTTCTTCAGATTTCTGCGGGCCAATGTCATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
14533575 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTC
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * * *
14533640 AAAACTTTTTACGGAT-AAGAATTTTTTAAAATTTTTTTGAAAGGATTTTTGGCCCCCAAACTTG
260 GAAACTTTTTACGGTTCGAG-ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCCAAACTTG
* *
14533704 GTAGACGTGATCCTTGTATGTTTGTTGGCATGCACAAAAAAATCAGCTAAAATCTCAAAGTGTAC
323 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATCAGCTAAAAACTCAAAGTGTAC
* * *
14533769 AAGATTTTGTTATCATTTG-AAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
14533833 ACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTCAGTTCTCGA-GTTTGATGA-GGATA-GGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
14533895 GCCAATATAAGGGACAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCAGCCCTCCC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCC
* * * *
14533960 GATTGCCGGAACCCCAATGTCGCCGGTCAGGTTCTCC-A-G-TG-ATGGTGCCCCGACGAAAAAA
582 GATCG-CGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCATGGTGCCCCGACGAAGAAA
* * * *
14534021 AATACGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGTCGCAACCTTCGGTCCGGTCCGATCT
646 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCT
* * * *
14534086 TAGACTGGGAATGAACTCCATATGATTAGACTGGGAAAGAACTTCGTATGCCTAAGTCAACCCAC
711 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* *
14534151 GAAACGAGTGTGCAGGCGCTCAGCCGGCC-AAGAAGGGTGGGATGCACAAGCCGGGGATCGGTAG
776 --AAC----GTGCGGGCGCTCAGCCGGCCGACGAA------GAT------------GATC----G
* * * *
14534215 GGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCGCAACCCTCAGTCC-GATCCGAT
813 GGTCCCCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCAGGCCTGGTCCGAT
* * * * * * * *
14534270 CTTAGATTGGGAATAAACTCCGTATGCCCAAGCGAATCAATGAAACGAGCAGGCAGGCGGG-CGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAA-CAAATGAGCAGGCGGGCGGGACGG
* * *
14534334 GCGGGCACTACGCCGGCCAGAGAGACGGGATACGA-AAGCCATGGATCGATGGGGTGGTAGGTGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGC-ACAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * ***
14534398 GTTTTGGCACATCTTCATATTTCTACGTGCCAATTTTATTTTTATGGCTTGTAAATTCATACAAT
129 GTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * * * *
14534463 GGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGATGACTCATTTTTTAATTTTCATGATTTT
194 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * *
14534528 TGAAACTTTTTCCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGACTTTTGGCACCAAACTTGG
259 TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
14534593 TAGACGTGATCCTTGTATTTTTGTTGGCATGTACAAAAAAATACAGCCACAAACTCGAAGTGTAC
324 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT-CAGCTAAAAACTCAAAGTGTAC
* *
14534658 AAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGTAGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
14534723 ATCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTCTCAAGGTTTGATGAGGGATAGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG-TTCTCGAGGTTTGATGAGGGATAGGG
14534788 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
517 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GCCCCC
* *
14534853 CCGATCGTTGAAACCCCAATGCCGCCAGTCAGGTTCTCCGACGATGC-TGGTGCCCCGACGAAGA
580 CCGATCG-CGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCATGGTGCCCCGACGAAGA
* * * * * *
14534917 AAAATGTGGCACCAGCACATGCCCGTGCCCAGTATGTGCTGCCACAACCCCCGGTCCGGTCTGAT
644 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
* * *
14534982 CTTAGACTGGGAATGAACTTCGTATGCTTAGACTAGGAATGACCTCCGTATGCCTAAGTCAA-CC
709 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* **
14535046 TC-ACGTGCGGGCGCTCAGCCGGCC-A-GAAG-T-A-CGGGTCCCCCTCTGCATGCTGCTAATCC
774 ACAACGTGCGGGCGCTCAGCCGGCCGACGAAGATGATCGGGTCCCCCTCTGCATGCTGCCGATCC
* ** *
14535105 TGCTGCCACAACCCTCAACCCT-GTTCGAT
839 TGCTGCCGCAACCCTCAGGCCTGGTCCGAT
* *
14535134 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGACAAAATGAGTGGGC-GGCCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAAC-AAATGA----GCAGG-CGGGC-G
*
14535198 GTGACCGGGCGTCCGGGCACTACGCCTGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGG
59 G-GA-C-GG-G--CGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGG
* *
14535263 GTGGTAGGTGGGTTTCGGCACATCTTCATAGTTCTATGTGCCAATGCCATTTTTATGGCTTGTAA
118 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAA
*
14535328 AATCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
183 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* ** * * *
14535393 TTCATGATTTTCAAAACTTTTTGCAGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
248 TTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
*
14535458 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAAC
313 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATCAGCTAAAAAC
*
14535523 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCT
377 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* *
14535588 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGATTGATA
442 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * * *
14535653 AGGGATAGGGGGCCAATATAAAGGCCAAGTACTAGCACCCATCGCACATTATGTGTGCACA----
507 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* *
14535714 ---CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCAACGATG
572 CCGCCCCCCCGATCG-CGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG------C-ATG
* ** * * *
14535776 GAGCCCCGGTGAAGAAAAATGCGGCACCAGCACTTGCCCGATCCCAGCATGTGCTGCTGCAACCC
629 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * * *
14535841 TCGGTCCAGTCCGATCTTAGATTGGAAATGAACTCCGTGTGCTTAGACTGGGAATGAACTCCGTA
694 TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
**
14535906 TGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAATCGGCCAGAGGGGTGAGATGCGCAA
759 TGCCTAAGTCAA-CC-C---ACAA-CGTGCGGGCGCTC-A---GCC-----GG-CCGA--CG-AA
* * * *
14535971 GCCGGGGATCGATCGGGTCCCCCTCTACATGCTGCCGATCCTGCTTCCGCAATCCTC-GGTCTGG
805 ------GAT-GATCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGCCGCAACCCTCAGGCCTGG
*
14536035 TCCAAT
863 TCCGAT
* *
14536041 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAATCGAGCGGGCGGGCCGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACAAAT-GAGCAGGC-GG--G-C---
* ***
14536106 TGGGTCGACGGGCGGGCACTATGTTAGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATA-GG
58 --GG--GACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGG
* *
14536170 TGGTAGGTGGGTTTAGGTAGATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAA
119 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAA
* *
14536235 TTCATACAATGGTCCCTTATGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTT
184 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * *
14536300 TCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTATG-
249 TCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GGC
* * * *
14536364 CCCAAACTT-GTAGAGGTGATCCTTGTAATTTTCTTGGCATGCACAAAAAATTCAGCTAAAAACT
313 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATCAGCTAAAAACT
14536428 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
378 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* *
14536493 CTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAATGGGGTGTGAGTTCTCGAGGTTTGATGA
443 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
*
14536558 GGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
508 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
14536623 CG-CCCCCCGATCGTC-AGAACCCCAATGCC
573 CGCCCCCCCGATCG-CGA-AACCCCAATGCC
14536652 TAAGTCAACC
Statistics
Matches: 2823, Mismatches: 307, Indels: 253
0.83 0.09 0.07
Matches are distributed among these distances:
864 87 0.03
866 47 0.02
867 10 0.00
868 8 0.00
869 3 0.00
870 2 0.00
872 2 0.00
873 2 0.00
874 126 0.04
875 71 0.03
876 390 0.14
877 3 0.00
878 3 0.00
880 1 0.00
881 188 0.07
882 51 0.02
883 7 0.00
884 1 0.00
885 6 0.00
886 5 0.00
888 52 0.02
889 255 0.09
890 102 0.04
891 9 0.00
892 50 0.02
893 57 0.02
894 58 0.02
895 54 0.02
896 118 0.04
897 327 0.12
898 128 0.05
903 4 0.00
904 200 0.07
905 37 0.01
906 193 0.07
907 132 0.05
909 1 0.00
910 27 0.01
911 4 0.00
912 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (868 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACAAATGAGCAGGCGGGCGGGACGGG
CGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATCAGCTAAAAACTCAAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATC
GCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCATGGTGCCCCGACGAAGAAAAATGC
GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAACGT
GCGGGCGCTCAGCCGGCCGACGAAGATGATCGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGCC
GCAACCCTCAGGCCTGGTCCGAT
Found at i:14540519 original size:900 final size:903
Alignment explanation
Indices: 14538742--14540709 Score: 2566
Period size: 900 Copynumber: 2.2 Consensus size: 903
14538732 NNNNNNNNNN
* * *
14538742 TGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTGTTTA
1 TGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC-AATGCTCTTTA
14538807 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCA
65 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAG-CAATATAAGGGCCAAGTACCAGCA
* * ** * * * **
14538872 CCCATTGCACTTCATGTGCGCACA-CCCCCTGGGCCCCCCCGATCGCCGGAACCCCAATGCTGCC
129 CCCATCGCACATCATGTGCGCACACCCCCCCCGGCCACCCCGATCACCGGAACCCCAATACCACC
** *
14538936 GGTCAGGTTCTCCGGTGATGCTCTGACAATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACA
194 GGTCAGGTTCTCCGACGATGCTCCGACAATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACA
* * ** *
14539001 TGCCCGAGCCCAGTATGTGCTACCGCAATCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACT
259 TGCCCAAGCCCAGCAAATGCTACCGCAATCCTCGGTCTGATCTGATCTTAAACTGGGAATGAACT
* * * *
14539066 CGTATGCTTAGACTGGGAATGAACTCCGTTTTCCTAAGTCAACCCATGAAACGAGCGTGCGGCGC
324 CGGAAGCTTAGACTGGGAATGAACTCCGTTATCCTAAGTCAACCCACGAAACGAGCGTGCGGCGC
* * * * *
14539131 TCAATCGGCCAGAGGGGCGGGATGCGCAACTCGGGGATCGGTCGGTCCCCCTCTACGTGCTGTAG
389 TCAACCGGCCAGAGGGGCGGGATGAGCAACTCGAGGATCGGCCGGTCCCCCTCTACATGCTGTAG
* * *
14539196 ATCCTACTACCGCAACCCTCGGTCTGGTCTGATCTTAGCTTGGGAAGGAACTCCGTATGCCTAAG
454 ATCCTACTACCGCAACCCTCGGTCCGGTCTGATCTTAGATTGGGAAGGAACTCCCTATGCCTAAG
* *
14539261 CCAACCGAACGAAACGAGCAGAGGGCGAGCGGGCGGCGGACGCTACAATCGGCCAAGAGACGGGA
519 CCAACCGAACGAAACGAGCAGAGGGCGAGCGGGCGGCGGACACTACAACCGGCCAAGAGACGGGA
* * ** *
14539326 GCGTAAGCCGTTGGATCGATAGGGTGGTAGGTGGTTTAAAGCACATCTTCATATTTCTGCATTCC
584 GCGCAAGACGTTGGATCGATAGGGTGGTACATGGTTTAAAGCACATCTTCATATTTCTGCATGCC
* * * *
14539391 AATGCCATTTTTTATGGCTTGTAAATTCATAAACGATGGACCCTTAAGCCATCACGTGAAGTTTC
649 AAAGCCATTTTTAATGGCTTGTAAATTCAT-AACAATGGACCCTTAAGCCATCACGTGAAGTTGC
* *
14539456 ATGGCAAAGGCGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTT
713 ATGGCAAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGAGATTTTT
*** * *
14539521 TAAAATTTTTTCGAAAAGGATTTTGTCCAAACTTGTAGACGTGGATCCTTGCATTTTTTTTGGCA
778 TAAAATTTTTTCGAAAAGGATTTACCCCAAACTTGTAGACGTGAATCCTTGCATTTTTTTTGGAA
* * *
14539586 TGCAAAAAGATTCGGCTTAAAACATCAAAGTGTACAAGATTTTGTGACGCA-TTGAAAAAAG
843 TGCAAAAAAATTCAGCTAAAAACATCAAAGTGTACAAGATTTTGTGAC-CATTTGAAAAAAG
*
14539647 TGT-CCCA-TTCAAACACTTTAAT-GCTACT-GCAGCAAACCTAT-AAATCTCAATGC-CTTTAA
1 TGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATGCTCTTTAA
* ** * * * **
14539706 GGGGTTGTTGTTTTCTCAAGGTTTGATGAGGGATAGGGGGTCAATATAAAGGCCTTGTACCAGCA
66 GGGGGTG-TGAGTTCTCGAGGTTTGATGAGGGATAGGGAG-CAATATAAGGGCCAAGTACCAGCA
* * *
14539771 CCCATCGTACATCATGTGCGCACACCCCCCCCGGCCAGCCCGATCACCGGAACCCCAATACCATC
129 CCCATCGCACATCATGTGCGCACACCCCCCCCGGCCACCCCGATCACCGGAACCCCAATACCACC
*
14539836 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACA
194 GGTCAGGTTCTCCGACGATGCTCCGACAATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACA
* ** * *
14539901 TGCCCAAGCCCAGCAAATGCTGCCTTAA-CCTTCGGTTTGGTCTGATCTTAAACTGGGAATGAAC
259 TGCCCAAGCCCAGCAAATGCTACCGCAATCC-TCGGTCTGATCTGATCTTAAACTGGGAATGAAC
* * *
14539965 TCCGGAAGCTTAGATTGGGAATGAACTCTG-TATCCTAAGTTAACCCACGAAACGAGCGTGCGGC
323 T-CGGAAGCTTAGACTGGGAATGAACTCCGTTATCCTAAGTCAACCCACGAAACGAGCGTGCGGC
* * * * *
14540029 GCTCAGCCGGCCA-AGGGGTGGGATGATCAAGC-CGAGGATCGGCCGGGTCCTCCTCTGCATGCT
387 GCTCAACCGGCCAGAGGGGCGGGATGAGCAA-CTCGAGGATCGGCC-GGTCCCCCTCTACATGCT
* * * *
14540092 GTCA-ATCTTGCTACCGGAACCCTCGGTCCGGTCTGATCTTAGATTGGGAATGAACTCCCTATGC
450 GT-AGATCCTACTACCGCAACCCTCGGTCCGGTCTGATCTTAGATTGGGAAGGAACTCCCTATGC
* * *
14540156 CTAAGCCAACTGAA-GAAACGAGCAG-GCAGGCG-GTTGGGCGGGCGTG-CACTAC-GCCGGCCA
514 CTAAGCCAACCGAACGAAACGAGCAGAG--GGCGAG-CGGGC-GGCG-GACACTACAACCGGCCA
* *
14540216 GAGAGACGGGATGTGCAAGACG-TGGATCGATAGGGTGGTACATGGGTTT-AGGCACATCTTCAT
574 -AGAGACGGGA-GCGCAAGACGTTGGATCGATAGGGTGGTACAT-GGTTTAAAGCACATCTTCAT
** * * *
14540279 ATTTCTGTGTGCCAAAGCCA-TTTTAATGGCTTGTAAATTCAT-ACAATGGTCCCTTAAGGCTTC
636 ATTTCTGCATGCCAAAGCCATTTTTAATGGCTTGTAAATTCATAACAATGGACCCTTAAGCCATC
** *
14540342 ACGTGAAGTTGCATGGC-AAGACGACTCGTTTTCTATTTTTCACAATTTTTTAACCTTTTTACGG
701 ACGTGAAGTTGCATGGCAAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGG
*
14540406 TTCGGGATTTTTTAAAATTTTTTCG-AAAGGAGTTTCAACCCCAAACTTCGTAGACGT-AATCCT
766 TTCGAGATTTTTTAAAATTTTTTCGAAAAGGA-TTT--ACCCCAAACTT-GTAGACGTGAATCCT
* *
14540469 TGTATTTTTTTTGGAATGCACAAAAAAATTCAGCTAAAAAC-TCGAAGTGTACAAGATTTTGTGA
827 TGCATTTTTTTTGGAATG--CAAAAAAATTCAGCTAAAAACATCAAAGTGTACAAGATTTTGTGA
14540533 CCATTTGAAAAAAG
890 CCATTTGAAAAAAG
* * * *
14540547 TGTCCCCATTTCAGACACATTAATGGGTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTA
1 TGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT-CAATGCTCTTTA
*
14540612 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCTAATATAAGGGCCAAGTGCCAGCA
65 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGC-AATATAAGGGCCAAGTACCAGCA
*
14540677 CCCATCACACATCATGTGCGCACACCCCCCCCG
129 CCCATCGCACATCATGTGCGCACACCCCCCCCG
14540710 ACGATGCCCG
Statistics
Matches: 917, Mismatches: 116, Indels: 59
0.84 0.11 0.05
Matches are distributed among these distances:
896 6 0.01
897 69 0.08
898 45 0.05
899 144 0.16
900 356 0.39
901 126 0.14
902 32 0.03
903 18 0.02
904 16 0.02
905 10 0.01
906 83 0.09
907 12 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (903 bp):
TGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATGCTCTTTAA
GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCAATATAAGGGCCAAGTACCAGCACC
CATCGCACATCATGTGCGCACACCCCCCCCGGCCACCCCGATCACCGGAACCCCAATACCACCGG
TCAGGTTCTCCGACGATGCTCCGACAATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATG
CCCAAGCCCAGCAAATGCTACCGCAATCCTCGGTCTGATCTGATCTTAAACTGGGAATGAACTCG
GAAGCTTAGACTGGGAATGAACTCCGTTATCCTAAGTCAACCCACGAAACGAGCGTGCGGCGCTC
AACCGGCCAGAGGGGCGGGATGAGCAACTCGAGGATCGGCCGGTCCCCCTCTACATGCTGTAGAT
CCTACTACCGCAACCCTCGGTCCGGTCTGATCTTAGATTGGGAAGGAACTCCCTATGCCTAAGCC
AACCGAACGAAACGAGCAGAGGGCGAGCGGGCGGCGGACACTACAACCGGCCAAGAGACGGGAGC
GCAAGACGTTGGATCGATAGGGTGGTACATGGTTTAAAGCACATCTTCATATTTCTGCATGCCAA
AGCCATTTTTAATGGCTTGTAAATTCATAACAATGGACCCTTAAGCCATCACGTGAAGTTGCATG
GCAAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAA
AATTTTTTCGAAAAGGATTTACCCCAAACTTGTAGACGTGAATCCTTGCATTTTTTTTGGAATGC
AAAAAAATTCAGCTAAAAACATCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
Found at i:14540811 original size:26 final size:26
Alignment explanation
Indices: 14540760--14540811 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
14540750 CCGGTCCGAT
* * *
14540760 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACAGGAAATGAACTCCATATG
*
14540786 CTTAGACAGGAAATGAACTCTATATG
1 CTTAGACAGGAAATGAACTCCATATG
14540812 TCTAAGTCAA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.33, C:0.17, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACAGGAAATGAACTCCATATG
Found at i:14543937 original size:26 final size:26
Alignment explanation
Indices: 14543908--14543960 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14543898 CTGGTCCGAT
*
14543908 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
* *
14543934 CTTAGATTGGGAAAGAACTTCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
14543960 C
1 C
14543961 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCGTATG
Found at i:14545241 original size:27 final size:25
Alignment explanation
Indices: 14545211--14545267 Score: 62
Period size: 26 Copynumber: 2.2 Consensus size: 25
14545201 TTTCTCACGA
* *
14545211 TTTTTGAAACTTTTTACGGTTCAGGAT
1 TTTTTGAAAATTTTTACGGAT--GGAT
*
14545238 TTTTT-AAAATTTTTTCGGATGGAT
1 TTTTTGAAAATTTTTACGGATGGAT
14545262 TTTTTG
1 TTTTTG
14545268 CCCCAAACTT
Statistics
Matches: 26, Mismatches: 3, Indels: 4
0.79 0.09 0.12
Matches are distributed among these distances:
24 9 0.35
26 12 0.46
27 5 0.19
ACGTcount: A:0.21, C:0.07, G:0.18, T:0.54
Consensus pattern (25 bp):
TTTTTGAAAATTTTTACGGATGGAT
Found at i:14545711 original size:25 final size:25
Alignment explanation
Indices: 14545671--14545723 Score: 70
Period size: 25 Copynumber: 2.1 Consensus size: 25
14545661 GGTCCAGTCC
14545671 TATCTTAGACTAGGAATCAACTCCG
1 TATCTTAGACTAGGAATCAACTCCG
* * * *
14545696 TATCTTAGATTGGGAATGAACTCTG
1 TATCTTAGACTAGGAATCAACTCCG
14545721 TAT
1 TAT
14545724 GCCTAAGTCA
Statistics
Matches: 24, Mismatches: 4, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
25 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.19, T:0.34
Consensus pattern (25 bp):
TATCTTAGACTAGGAATCAACTCCG
Found at i:14546451 original size:901 final size:884
Alignment explanation
Indices: 14543259--14547005 Score: 4693
Period size: 873 Copynumber: 4.2 Consensus size: 884
14543249 CCAAGTACCA
* * * *
14543259 GCACTACGTCGGCCAGAGAGACAAGATGCCAAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTA
1 GCACTATGCCGGCCAGAGAGACAAGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
14543324 GGCACATCTTCATATTTCTGTC-TGCCAATGCCATTTTTATGCCTTATAAATTCATACAATGGTC
66 GGCACATCTTCATATTTCTGACATGCCAATGCCATTTTTATGCCTTGTAAATTCATACAATGGTC
14543388 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCTTTTTTTATTTTTCATGATTTTTGAA
131 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCTTTTTTTATTTTTCATGATTTTTGAA
* *
14543453 ACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
196 ACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
14543518 CATGATCCTTGTA-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGA
261 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
14543582 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAAAGGCTACTGGCAGCAAACCT
326 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAGCAAACCT
*
14543647 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGGGCCA
391 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
14543712 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATC
456 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATC
* * **
14543777 GCCAGAACCCCAATGCCGCCGGTCAGGTTCTCTAGG-GATGCTCTAGCGATGGTGCCCCAGCGAA
520 GCCGGAACCCCAATGCCGCCGGTCAGGTTCTC-CGGCGATGCTCCGGCGATGGTGCCCCAGCGAA
* * *
14543841 GAAAAATGCGGCACCAGCACATGCCCGAGCCTAACATGTGCTGCC-TCAACCATCGGTCTGGTCC
584 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGT-AACC--C--TC--GT--
* * *
14543905 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAAAGAACTTCGTATGCCTAAGTCAA
640 GATC-T---CT-GG--T---CTCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * * * * *
14543970 CCCATGAAGCGAGCGTGTGGGCACTCAGTCGGCCA-ATGGGACGGCATGCGCAAGCTGGGGATCG
693 CCCACGAAACGAGCGTGCGAGCGCTCAGTCGGCCAGA-GGGGCGGGATGCGCAAGCCGGGGATCG
* * * * ** *
14544034 GTTGGGTCCCCCTCTACGTGCTGCCAATCTTGCTGCTGCAACCCTCAGTC-CGGTCTGATCTTAG
757 GTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCACAACCCTCAGTCGCGTTCTGATCTTAG
* * * *
14544098 ATTGGGAATGAACTCTGTATGCCTAAGCCAACCGACG-AA--A-CGA----GCGGACGGGTGG
822 ACTGGGAACGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGG
* * * * *
14544153 GCACTATACCGGCCAGAGAGAC-GGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTC
1 GCACTATGCCGGCCAGAGAGACAAGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* **
14544217 GGCACATCTGCATATTTCT-ACATGCCAATGCCATTTTTATGTGTTGTAAATTCATACAATGGTC
66 GGCACATCTTCATATTTCTGACATGCCAATGCCATTTTTATGCCTTGTAAATTCATACAATGGTC
* * **
14544281 CCTTAAGCCTTCACATGAAGTTTCATAGCAAGATGACT-TGTTTTCCATTTTTCATGATTTTTGA
131 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCT-TTTTTTATTTTTCATGATTTTTGA
* *
14544345 AACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGCA-TTTTGGCCCCAAACTTGGTA
195 AACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCAGAAGG-AGTTTTGGCCCCAAACTTGGTA
* * * * * *
14544409 GAGGTGATCCTTGTATTTTTTTTGGTATGAACAAAAACATTCAGCTAAAAACTTGAAGTGTACAA
259 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * **
14544474 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACGCTTTAATGGCTACTGATAGCAAAC
324 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAGCAAAC
* *
14544539 CTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
389 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
14544604 CAATATAAGGGCCAAGTACCAGCGCCCATCGCACATCATGTGCGCACA-----C--CCCTCCGAT
454 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGAT
* * * * * *
14544662 CGCCGGAACCCCAATGCCACTGGTTAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGGCAAA
519 CGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCAGCGAA
* * *
14544727 GAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATGTGCTACCGCAACCCTCG-G---TCTGG
584 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGTGATCTCTGG
14544788 TCT--GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG-G
649 TCTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAG
* * * * *
14544850 ACGCTCAGTCGGCCAGAGGGGCGGGATGTGCAAGTCGGGGATCGGTCGGGTCCCCATCTGCATGC
714 -CGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGC
* * * * * ** * *
14544915 TACCGATCCTGCTACCGCAACCCTCAATCGGGTT-TGTTCTTAGACCAGGAATGAACTCTATATG
778 TGCCGATCCTGCTACCACAACCCTCAGTCGCGTTCTGATCTTAGACTGGGAACGAACTCTGTATG
* * * * *
14544979 CCTAAGCCAACCGACAAAATGAGCGGGCGGACGGGCGGGTGGGCAG
843 CCTAAGCCAACCGACGAAACGAGC--G-AG-CGGGCGGGCGGGCGG
* ** * *
14545025 GCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTA
1 GCACTATGCCGGCCAGAGAGACAAGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
14545090 GGCACATCTTCATATTTCTG-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
66 GGCACATCTTCATATTTCTGACATGCCAATGCCATTTTTATGCCTTGTAAATTCATACAATGGTC
* * * * *
14545154 CCTTAAGCCTTCACATGAAGTTTCATGGCCAGATGACTCGTTTTTTATTTCTCACGATTTTTGAA
131 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCTTTTTTTATTTTTCATGATTTTTGAA
* * * * *
14545219 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGATGGATTTTTTGCCCCAAACTTGGTAGA
196 ACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
14545284 CGTGATGCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
261 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
14545349 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
326 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAGCAAACCT
* * *
14545414 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCGAAGTTTGATGAGGGATAGGGGACCA
391 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
14545479 ATATAAGGGCCAAGTACCAGCTCCCATCGCACATCATGAGTGCACACCCCCCGGCCCCCCGATCG
456 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCG
* * * * * * * *
14545544 TCGGAACCTCAATACCGCCAGTTAGGTTGTCCGGCGATGCTCCGGCGATGGTGCCCCGGTGAAGA
521 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCAGCGAAGA
*
14545609 AAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCAGTCCTAT
586 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTC-GT---G----AT
* *
14545674 CTTAGACTAGGAATCAACTCCGTATCTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCCA
643 C-T---CT-GG--T---CTCCG-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * *
14545739 C-AGTACGAGCGCGCGAGCGCTCAGTCGGCCAGAGAGGCGGGATGCACAAACCGAGGATCGGTCG
697 CGA-AACGAGCGTGCGAGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
* * * *
14545803 GGTCCCCCTCTACGTACTGCCGATCCTGCTACCACTACCCTCGGTC-CGTTCTGATCTTAGATTG
761 GGTCCCCCTCTACGTGCTGCCGATCCTGCTACCACAACCCTCAGTCGCGTTCTGATCTTAGACTG
*
14545867 GGAACGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGG
826 GGAACGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGG
*
14545926 GCATTATGCCGGCCAGAGAGACAAGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
1 GCACTATGCCGGCCAGAGAGACAAGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
14545991 GGCACATCTTCATATTTCTGTC-TGCCAATGCCATTTTTATGCCTTGTAAATTCATACAATGGTC
66 GGCACATCTTCATATTTCTGACATGCCAATGCCATTTTTATGCCTTGTAAATTCATACAATGGTC
14546055 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCTTTTTTTATTTTTCATGATTTTTGAA
131 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCTTTTTTTATTTTTCATGATTTTTGAA
14546120 ACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
196 ACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
14546185 CGTGATCCTTGTA-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
261 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
14546249 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAAAGGCTACTGGCAGCAAACCT
326 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAGCAAACCT
*
14546314 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGGGCCA
391 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* *
14546379 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCACCAATC
456 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCGATC
** * * * * * * **
14546444 ATCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGATGCCCCGGGGATGGTGCCCTAATGAAG
520 GCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCAGCGAAG
* * * * *
14546509 AAAAATGCGGCACAAGCACATGCTCGAGCCCAGCATGTGCTGCTGTAACCCT--TGGTC-C-GG-
585 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGTGATCTCTGGT
* *
14546569 -TCCGATCTTAGACTGGGAATTAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGAGC
650 CTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGC
* ** * *
14546633 GCTCAG-CAGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGTGTCCCCCTCTGCGTGCT
715 GCTCAGTC-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCT
** * ** * * * * * *
14546697 GGTGATTCTGCTGTCACATCCCTCGGTCTG-GTAC-AACCTTAGACTGGGAACAAACTCTGTATG
779 GCCGATCCTGCTACCACAACCCTCAGTC-GCGTTCTGATCTTAGACTGGGAACGAACTCTGTATG
* * * *
14546760 CCTAAGCCAACCGACGAAACAAACGAGTGGGCGAGCGGGC--
843 CCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGG
* * * * * * *
14546800 G-A--A---CGG---GTGGGCACTACATCGGCCAAAG-GGACAGGATCGATA-GGTGGTAGGT-G
1 GCACTATGCCGGCCAGAGAG-ACAAGAT--GCGAAAGCCG--TGGATCGATAGGGTGGTAGGTGG
* **
14546853 GTTTAGGCACATCTTCATATTTCT-ACGTGCCAATGCCATTTTTATGAATTGTAAATTCATACAA
61 GTTTAGGCACATCTTCATATTTCTGACATGCCAATGCCATTTTTATGCCTTGTAAATTCATACAA
* * * *
14546917 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
126 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCTTTTTTTATTTTTCATGATTT
* *
14546982 TTGAAACTTTTTACGGTTTAGGAT
191 TTGAAACTTTTTGCGGTTCAGGAT
14547006 GAACTCCTTA
Statistics
Matches: 2505, Mismatches: 276, Indels: 171
0.85 0.09 0.06
Matches are distributed among these distances:
859 1 0.00
860 164 0.07
861 7 0.00
862 1 0.00
863 1 0.00
864 3 0.00
865 3 0.00
866 7 0.00
867 145 0.06
868 19 0.01
869 11 0.00
870 2 0.00
871 1 0.00
872 29 0.01
873 437 0.17
874 1 0.00
875 1 0.00
876 185 0.07
877 9 0.00
878 1 0.00
880 114 0.05
881 1 0.00
882 2 0.00
884 3 0.00
885 2 0.00
886 103 0.04
887 5 0.00
889 1 0.00
891 2 0.00
892 2 0.00
893 223 0.09
894 232 0.09
895 1 0.00
896 2 0.00
897 2 0.00
898 1 0.00
899 1 0.00
900 227 0.09
901 368 0.15
902 4 0.00
903 1 0.00
904 5 0.00
905 174 0.07
906 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (884 bp):
GCACTATGCCGGCCAGAGAGACAAGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
GGCACATCTTCATATTTCTGACATGCCAATGCCATTTTTATGCCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCTTTTTTTATTTTTCATGATTTTTGAA
ACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAGCAAACCT
GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCG
CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCAGCGAAGA
AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGTGATCTCTGGTC
TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCG
CTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGC
CGATCCTGCTACCACAACCCTCAGTCGCGTTCTGATCTTAGACTGGGAACGAACTCTGTATGCCT
AAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGG
Found at i:14548242 original size:19 final size:19
Alignment explanation
Indices: 14548218--14548261 Score: 79
Period size: 19 Copynumber: 2.3 Consensus size: 19
14548208 GATTTTGTGA
14548218 CCATTTGAAAAAAGCGTCC
1 CCATTTGAAAAAAGCGTCC
14548237 CCATTTGAAAAAAGCGTCC
1 CCATTTGAAAAAAGCGTCC
*
14548256 CTATTT
1 CCATTT
14548262 CAGACACTTT
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
19 24 1.00
ACGTcount: A:0.34, C:0.25, G:0.14, T:0.27
Consensus pattern (19 bp):
CCATTTGAAAAAAGCGTCC
Found at i:14548581 original size:26 final size:26
Alignment explanation
Indices: 14548541--14548593 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14548531 CCAATCTAAT
* *
14548541 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
*
14548567 CTTAGACAGGGAATGAACTCTGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
14548593 C
1 C
14548594 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCGTATG
Found at i:14549446 original size:26 final size:26
Alignment explanation
Indices: 14549417--14549469 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14549407 CTGGTCCGAT
*
14549417 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14549443 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14549469 C
1 C
14549470 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:14550352 original size:26 final size:26
Alignment explanation
Indices: 14550316--14550365 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
14550306 TCAGTTCGAT
14550316 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14550342 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
14550366 AGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14551246 original size:26 final size:26
Alignment explanation
Indices: 14551217--14551269 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14551207 CCGGTCCGAT
*
14551217 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
14551243 CTTAGACTGCGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
14551269 C
1 C
14551270 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATG
Found at i:14551727 original size:899 final size:895
Alignment explanation
Indices: 14549294--14553930 Score: 6096
Period size: 901 Copynumber: 5.2 Consensus size: 895
14549284 ATCATCGAAA
* * **
14549294 CCCAATGCCGCCGGTCAGGTT-TTCCGACGATGCTCCGACGATGGTGCATCGACGAAGAAAAATG
1 CCCAATGCCGCCGGTCAGGTTCTT-CGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG
* ** * *
14549358 CGGCCCCAGCACATGCCCGAGCCCAGCATGTGCTGTTGTAACCCTCGGTCTGGTCCGATCTTAGA
65 -GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
* *
14549423 CTGGGAATGAACTCCGTATGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGGAA
129 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * * *
14549488 CGAGCGTGCGGGCACTCAACCGGCCAGAGGCGCGGGATGCGCAA-CTCAGGGATCGGTCGAGT-T
194 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC-CGGGGATCAGTCGGGTCC
* * * *
14549551 CCCTCTGCATGCT-TCCGATCCTGCTACCTCAACCCTCGGTCTGGTCTGATCCTAGACTAGGAAT
258 CCCTCTGCGTGCTGT-CGATCCTGCTGCC-CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
* *
14549615 GAATTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCGGGCGGGCACTACGCCGGCCA
321 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCA
* *
14549680 GAGAGACGGGATGCGCAAGCTGTGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATAT
386 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* * * *
14549745 TTCTGCATGCCAATGCCATTTTTATAGCCTGTAAATTCATACAAGGGTCCCTTAAGCCTTAACGT
451 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * *
14549810 GAAGTTTCATGGCGAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA
516 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
* * * *
14549875 GATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTT
581 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * ** * *
14549940 TTTTTTGCATGGACAAAAAAATTTTGCTAAAAACTCGAAGTGTACAAGATTTTGTGGCCATTTAA
646 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
14550005 AAAAAGTGTCCCCATTTCAGACAGTTTAACGGCTACTGGCAACAAACCTGTAAAATCTCAAATGC
711 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
14550070 TCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTA
776 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
*
14550135 CCAGCACCCATCACACATCATGTGCGCACACCCCCCTGGCCCCTCCGATCGTCGGAAC
841 CCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-GGCCCC-CCGATCGTCGGAAC
* * * *
14550193 CCCAATGCCGCCGGTCAGGTTATCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATAT
1 CCCAATGCCGCCGGTCAGGTTCTTCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAAT-G
* * * * *
14550258 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCAGTTCAGTTCGATCTTAGAC
65 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
* *
14550323 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAAGCCTAAGTCAACCCACGAGAC
130 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * ***
14550388 GAGCATGCGGGCGCTC-GACCGGCCAGAGGGGCGGGATGCCCAAGCTGGGGATCTGTCGGGTTTG
195 GAGCGTGCGGGCGCTCAG-CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCC
* * * * *
14550452 CCTCTGCGTGCTGCCAATCCTGCTACCACAACCCTCGGCCCAATTTGGTCTGATCTTAGACTAGG
259 CCTCTGCGTGCTGTCGATCCTGCTGCC-CAACCCTCGG-----TCTGGTCTGATCTTAGACTGGG
* * * *
14550517 AATGAACTCCGTATGCTTAAGCCAACCGACGAAACGAGCGGGCGGAC---AGGGCACTACGTCGG
318 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGG
* *
14550579 CCAAAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
383 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* *** * * *
14550644 TATTTTTATGTGCCAATGACGTTTTTATGGCTTGTAAATTCAGACAATGGTCCCTTAAGCCTTCA
448 TATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
** *
14550709 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTATGGTT
513 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT
* * *
14550774 CAGGATTTTTTAAAATTTTTTC-AGAAGGAGATTTGGCCCTAAACTTGGTAGACGTGATCCTTGT
578 CGGGATTTTTTAAAATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * *
14550838 ATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAATTCGAAGTGTACAAGATATTGTGACCAT
642 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
* * *
14550903 TTGAAAAAATTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAA
707 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
14550968 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
772 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * * ***
14551033 AGTACCAGCACCCATCGCCCATCATGTGTGCACACCCCCTGGCCCAGCCGATCGTAAAAAC
837 AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-GGCCC-CCCGATCGTCGGAAC
* * * *
14551094 GCCAATGCCGTCGGTTAGGTTCTTCGGCGATGCTCCGGCGATGGTGCCCCAACGAAGAAAAATGC
1 CCCAATGCCGCCGGTCAGGTTCTTCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG-
* * *
14551159 AGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGAC
65 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * * *
14551224 TGGGAATGAACTCCGTATGCTTAGACTGCGAATGAACTCCGTATGCCTAAGTTAACCAACAAAAC
130 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* *
14551289 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCAGCCGGGTCCCC
195 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCC
* * * * *
14551354 CTCTGCATGCTGTCGATCTTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGATTGGGAATGAA
260 CTCTGCGTGCTGTCGATCCTGCTGCC-CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAA
* * * * * * * ** *
14551419 CTCTGTATGCCTAAGCCAACCTACGAAACGAGCAGACGAGCGGACGGGGACTACGTTGGCTAGAG
324 CTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAG
** * *
14551484 AGACGGGATTTGCAAGCCATGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTC
389 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* *
14551549 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAGGCCTTCATGTGAA
454 TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
**
14551614 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTGAAAACTTTTTGGGGTTCGGGA
519 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG-AAACTTTTTACGGTTCGGGA
*
14551678 TTTTTTAAACTTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
583 TTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * **
14551743 GTTGGGATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACTAGCTGAAA
648 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* *
14551808 AAATTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTC
713 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * * **
14551873 TTTAAGGGGGTATGAGTTCTCAACGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTATG
778 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * *
14551938 GGCACCCTTCGCACATCATGGGCGCACACCCCCGAGCCCCCCGATCGTCGGAAC
843 AGCACCCATCGCACATCATGTGCGCACACCCCCG-GCCCCCCGATCGTCGGAAC
* * * * *
14551992 CCCAATGCCGTCGGTTAGGTTC-TCTGGCGATGCTCCGTCGATGGCGCCCCGACAAAGAAAAATG
1 CCCAATGCCGCCGGTCAGGTTCTTC-GGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG
* * * * * *
14552056 TGACACTAGCACATGCCC-AGCCCAGCATGTGCTGCCACAAACCTCGGTCCGATCTGATCTTAGA
65 -GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
* * * * *
14552120 CTTGGAATGAACTCCATATGCTTAAACTGGGAATGAACTCCGCATGCCTAAGTCAACCAACGAAA
129 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * *
14552185 CGAGCGTGCGGGCGCTCAGTCGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGAGTCCC
194 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCC
* * ** * * *
14552250 CCTCTACGTGC-GTCTGATACTATTGCTGCAACCCTTGATCTGGTCTGATCTTAGACTGGGAATG
259 CCTCTGCGTGCTGTC-GATCCTGCTGC-CCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATG
* * * ** * *
14552314 AATTTCGTATGCCTAAGCCAACTGATTAAACGAGCGGGCGGGCGGGTGGGCGGGCACTAGGCCGA
322 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC----GGGCGGGCACTACGCCGG
* * * *
14552379 CCAGAGAGGCAGGATTCGCTAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
383 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* * * *
14552444 TATTTCTGCATGCCGATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCTTTAATCCTTCA
448 TATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * * * *
14552509 CGCGAAGTTTCAGGGTAAGACGACTCATTTTCTATTTTTTACGATTTTTGAAACTTTTTACGGTT
513 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT
* * * * * *
14552574 CGGGATTTTCTAAAATTTTTTTGGAAGGAATTTTGGCCCCAAACTTTGTAGACATGATCCTTGTA
578 CGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
** *
14552639 TTTTTGTTGGCATGCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGGGACCATT
643 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* ** *
14552704 TGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGATAGCAAACCTGCAAAATCTCAAA
708 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* *
14552769 TGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGCGATAGGGGGCC-ATATAAGGGCCAA
773 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * * * **
14552833 GTACCAGCACGCATCGCACATCATGTGTTGCACACCCCCGACCCTCCTGATCACCGGAA-
838 GTACCAGCACCCATCGCACATCATGTG-CGCACACCCCCGGCCC-CCCGATCGTCGGAAC
* * * ** *
14552892 CCCAATGCCGTCGGTCAGGTTCTCCGGCAATGCTCCGGCGATGGTG-CCCGGTGAAG-AATATGT
1 CCCAATGCCGCCGGTCAGGTTCTTCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG-
* * * *
14552955 GGCACCAGCACATGCCCGAGCCCAACATGTGCTGTCGCAACCCTC-GTCGCGGTCCAATCATAGA
65 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CGGTCCGATCTTAGA
* ** *
14553019 CTAGGAAATGAACTCCGTATGCTTTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCATGA
129 CT-GGGAATGAACTCCGTATGC-TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * * * * *
14553084 AACAAGCGTACGGGCGCTCAGTCGGCCAGAGGGGTGAGATGCGTAAGCCAGGGATCAGCCGGGTC
192 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTC
* * * *
14553149 CCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCAGTCTGGTCTGATCGTAGATTGGGAAT
257 CCCCTCTGCGTGCTGTCGATCCTGCTGCC-CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
* *
14553214 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCGGGCGGGCACTACACCGGCCA
321 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCA
* * * *
14553279 GAGAGATGGGATGCACAAGCCGTGGATCAATAGGGT-GTAGGTGGGTTTTGGCACATCTTCATAT
386 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*
14553343 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCACGT
451 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
*
14553408 GAAGTTTCATGGCAAGACGACTCGTTGTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
516 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
* * **
14553473 GATTTTTTAAAATTTTTTCG-AATGAGTTCTGGCCCCAAACTTCTTAGACGTGATCCTTGTATTT
581 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--T
* * *
14553537 TTTTTTTCGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTGACCATTT
644 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * *
14553602 GAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATATCAAAT
709 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * *
14553667 GCTCTTTAAAGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAG
774 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * **
14553732 TACCATCACCCATCGCACATCATGTGCACACACCCCCCCGGCCCCCCCGATCACCGGAAC
839 TACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCGG-CCCCCCGATCGTCGGAAC
* *
14553792 CCCAATGCTGCCCGTCAGGTTC-TC--CGA--------CGATGGTGCCCCGACGAAGAAAAATGA
1 CCCAATGCCGCCGGTCAGGTTCTTCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG-
* * * * **
14553846 GGCACTAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCGTCGATTCGGTTTGATCTTAGAC
65 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
14553911 TGGGAATGAACTCCGTATGC
130 TGGGAATGAACTCCGTATGC
14553931 GTAAGCCAAC
Statistics
Matches: 3257, Mismatches: 433, Indels: 105
0.86 0.11 0.03
Matches are distributed among these distances:
889 8 0.00
890 26 0.01
891 59 0.02
892 1 0.00
895 35 0.01
896 224 0.07
897 456 0.14
898 147 0.05
899 747 0.23
900 151 0.05
901 881 0.27
902 459 0.14
905 63 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
CCCAATGCCGCCGGTCAGGTTCTTCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGG
GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCC
TCTGCGTGCTGTCGATCCTGCTGCCCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACT
CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAG
ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTT
TTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
ACCCATCGCACATCATGTGCGCACACCCCCGGCCCCCCGATCGTCGGAAC
Found at i:14552166 original size:26 final size:26
Alignment explanation
Indices: 14552114--14552166 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
14552104 CCGATCTGAT
* * *
14552114 CTTAGACTTGGAATGAACTCCATATG
1 CTTAAACTGGGAATGAACTCCACATG
*
14552140 CTTAAACTGGGAATGAACTCCGCATG
1 CTTAAACTGGGAATGAACTCCACATG
14552166 C
1 C
14552167 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCACATG
Found at i:14553066 original size:27 final size:28
Alignment explanation
Indices: 14553015--14553067 Score: 72
Period size: 27 Copynumber: 1.9 Consensus size: 28
14553005 GGTCCAATCA
*
14553015 TAGACTAGGAAATGAACTCCGTATGCTT
1 TAGACTAGGAAATGAACTCCATATGCTT
* *
14553043 TAGACT-GGGAATGAACTCTATATGC
1 TAGACTAGGAAATGAACTCCATATGC
14553068 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 1
0.85 0.12 0.04
Matches are distributed among these distances:
27 16 0.73
28 6 0.27
ACGTcount: A:0.32, C:0.17, G:0.23, T:0.28
Consensus pattern (28 bp):
TAGACTAGGAAATGAACTCCATATGCTT
Found at i:14554624 original size:26 final size:26
Alignment explanation
Indices: 14554595--14554647 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14554585 CCGGTCCGAT
* *
14554595 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
14554621 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
14554647 C
1 C
14554648 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14555535 original size:26 final size:26
Alignment explanation
Indices: 14555496--14555549 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
14555486 TTTGGTCTGA
*
14555496 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
*
14555522 GCTTAGACTAGGAATGAACTTCGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
14555548 GC
1 GC
14555550 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
GCTTAGACTAGGAATGAACTCCGTAT
Found at i:14555703 original size:902 final size:888
Alignment explanation
Indices: 14553902--14556412 Score: 3226
Period size: 902 Copynumber: 2.8 Consensus size: 888
14553892 ATTCGGTTTG
* *
14553902 ATCTTAGACTGGGAATGAACTCCGTATGCGTAAGCCAACCGACGAAATC-AGC-A---GGTGGGC
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-CGAGCGAGCGGGCGGGC
*
14553962 GGGAACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
65 GGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * * * * *
14554027 TAGGCACATCTTAATATTTCTACATGCCAATGCTATTCTTATGGCCTGTAAATTCATACAATGGT
130 TTGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * * **
14554092 CCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACTCATTTTCTATTTTTCACAATTTTCAA
195 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
* * * *
14554157 AACTTTTTGCGGTTCGAGATTTTTTGAAATTTTTTTGAAAGGAGTTTTGGCACCAAAC-ATGGTA
260 AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAA-GAGTTTTGGC-CCAAACTA-GGTA
* * * *
14554221 GACATGATCCTTTTATTTTTG-T-CA-G--C--------T-A---AAAACTTGAAGTCTACAAGA
322 GACGTGATCCTTGTATTTTTGTTGCATGCACAAAAAAATTCAGCTAAAACTCGAAGTGTACAAGA
* * *
14554269 TTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACTT
387 TTTTATGACCATTTGAA-AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * * *
14554334 GTAAAATCTCAAATGTTTTTTAAGGGGGTGTGAGTTCTCGAGGTTT-ATGAGGGATAAGGGGCCA
451 GTAAAATCTCAAATGATCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
* * * *
14554398 ATATAAGGGCCAAGTACCAGCACCCATCGCCCATCATGTGTGCACACCCCCTTGGCCCAGCCGAT
516 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCC-CCCGAT
** * * *
14554463 CGTAAAAACGCCAATGCCGTCGGTTAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCAACGAA
579 CGTCGAAAC-CCAATG-CG-CCGTCAGGTTCTCCGG-GATGCTCC-ACGATGGTGCCCCAACGAA
* * * *
14554528 GAAAAATGCAGCACCAGCACATGCCCGAGTCTAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
639 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTG
*
14554593 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGCCTAAGTTAAC
704 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAAC
* * * *
14554658 CCAGGAAATGAACGTGCGGGCGCTCAGCCGACCAGAGTGACGGGATGCGCAAGTCGGGGATCAGC
769 CCACGAAATGAACGTGCGGGCGCTCAGCCGACCAGAGGGACGGGATGCGCAAGCCGAGGATCAGC
* ** * ***
14554723 CGGGTCCACCTCTGCATGTTGTCGATCCTGCTACCGTAACCCTCAGTCTGATTGG
834 CGGGTCCACCTCTGCATGCTACCGATCCTGCTACCGCAACCCTCAGTCTGATCCA
* *
14554778 ATCTTAGACTCGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGAGCGGGCGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGC-
* * * *
14554843 GGTGTGCACTACGTCGACTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
65 -G-G-GCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGG
** * *
14554908 GTTTTCACACATCTTCACATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
127 GTTTTGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
14554973 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGCTCGTTTTCTATTTTTCACGATTTT
192 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* *
14555038 TGAAACTTTTTCCGGTTCAAGATTTTTTAAAATTTTTTCGGAAGCAGTTTTGGCCGCAAACTAGG
257 TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAG-AGTTTTGGCC-CAAACTAGG
*
14555103 TAGACGTGATGCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTTAAAACTCGAAGTGTAC
320 TAGACGTGATCCTTGTATTTTTGTT-GCATGCACAAAAAAATTCAGC-TAAAACTCGAAGTGTAC
* *
14555168 AAGATTTTATGACCATTTGAAAAACGTGTCCTCATTTCAGACACTTTGATGGCTACTGGCAGCAA
383 AAGATTTTATGACCATTTGAAAAA-GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
14555233 ACCTGTAAAATCTCAAATGATCTTTAAGGGGGTGTGAGTTCTTAAAGTTTGATGAGGGACAGGGG
447 ACCTGTAAAATCTCAAATGATCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGG
*
14555298 GCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCG
512 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCG
*
14555363 ATCGTCGAAACCCTAATGTCGCCGATCAGGTTCTCCGGTGATGCTCCTACGATGGTGTCCCAACG
577 ATCGTCGAAACCC-AATG-CGCCG-TCAGGTTCTCCGG-GATGCTCC-ACGATGGTGCCCCAACG
* * ** **
14555428 AAGAAAAATGCGGCACCAACACATGCCCAAGCCCAGCATGTGCTATCGCAACCCTCGGTTTGGTC
637 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* * *
14555493 TGAGCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTTCGTATGCCTAAGTCA
702 TGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCA
* * * *
14555558 ACCCACGAAATGAGCGTGCGGGTGCTCAGCC-AGCCAGAGGGGCGGGATGTGCAAGCCGAGGAT-
767 ACCCACGAAATGAACGTGCGGGCGCTCAGCCGA-CCAGAGGGACGGGATGCGCAAGCCGAGGATC
* * * * * ** *
14555621 AGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTATCGCAACTCTTGGT-TCGGTCCA
831 A-GCCGGGTCCACCTCTGCATGCTACCGATCCTGCTACCGCAACCCTCAGTCT-GATCCA
* * *
14555680 ATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCG
* * *
14555745 GGCACTACACCGGCCAGAGAGATGGGATGCACAAGCCGTGGATCAATAGGGT-GTAGGTGGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
*
14555809 TGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAATACAATGGTC
131 TGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
14555874 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTGTCTATTTTTCATGATTTTTGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
* * ***
14555939 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-GAATGAGTTCTGGCCCCAAACTTCTTAGA
261 ACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAA-GAGTTTTGG-CCCAAACTAGGTAGA
*
14556003 CGTGATCCTTGTATTTTTTTTTTCGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
324 CGTGATCCTTGTA--TTTTTGTT-GCATGCACAAAAAAATTCAGCT-AAAACTCGAAGTGTACAA
* * *
14556068 GATTTTCTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAAC
385 GATTTTATGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
14556133 CTGTAAAATATCAAATGCTCTTTAAAGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
449 CTGTAAAATCTCAAATGATCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
* * *
14556198 TAATATAAGGGCCAAGTACCATCACCCATCGCACATCATGTGCACACACCCCCCCGGCCCCCCCG
514 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCG
** * *
14556263 ATCACCGGAACCCCAATGCTGCCCGTCAGGTTCTCC-----G----ACGATGGTGCCCCGACGAA
577 ATCGTC-GAAACCCAATGC-G-CCGTCAGGTTCTCCGGGATGCTCCACGATGGTGCCCCAACGAA
* * * * *
14556319 GAAAAATGAGGCACTAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCGTCGATCCGGTTTG
639 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTG
14556384 ATCTTAGACTGGGAATGAACTCCGTATGC
704 ATCTTAGACTGGGAATGAACTCCGTATGC
14556413 GTAAGCCAAC
Statistics
Matches: 1426, Mismatches: 160, Indels: 85
0.85 0.10 0.05
Matches are distributed among these distances:
875 1 0.00
876 47 0.03
877 1 0.00
880 6 0.00
882 1 0.00
883 3 0.00
884 243 0.17
885 2 0.00
887 2 0.00
888 1 0.00
889 99 0.07
890 1 0.00
894 1 0.00
896 32 0.02
897 170 0.12
898 248 0.17
899 16 0.01
900 28 0.02
901 16 0.01
902 324 0.23
903 120 0.08
904 64 0.04
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCG
GGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
TGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
ACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGAGTTTTGGCCCAAACTAGGTAGACG
TGATCCTTGTATTTTTGTTGCATGCACAAAAAAATTCAGCTAAAACTCGAAGTGTACAAGATTTT
ATGACCATTTGAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
ATCTCAAATGATCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATA
AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAA
ACCCAATGCGCCGTCAGGTTCTCCGGGATGCTCCACGATGGTGCCCCAACGAAGAAAAATGCGGC
ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGG
GAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAA
CGTGCGGGCGCTCAGCCGACCAGAGGGACGGGATGCGCAAGCCGAGGATCAGCCGGGTCCACCTC
TGCATGCTACCGATCCTGCTACCGCAACCCTCAGTCTGATCCA
Found at i:14557107 original size:26 final size:26
Alignment explanation
Indices: 14557078--14557130 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14557068 CCGGTCCGAT
* *
14557078 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
14557104 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
14557130 C
1 C
14557131 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14558018 original size:26 final size:26
Alignment explanation
Indices: 14557979--14558032 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
14557969 TTTGGTCTGA
*
14557979 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
*
14558005 GCTTAGACTAGGAATGAACTTCGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
14558031 GC
1 GC
14558033 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
GCTTAGACTAGGAATGAACTCCGTAT
Found at i:14558919 original size:26 final size:26
Alignment explanation
Indices: 14558883--14558935 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14558873 CCGGTCCGAT
* *
14558883 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
*
14558909 CTTAAACTGGGAATGAAGTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14558935 C
1 C
14558936 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:14559831 original size:26 final size:26
Alignment explanation
Indices: 14559781--14559833 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14559771 CTAGTCCGAT
*
14559781 CTTAGACTGGGAATGAACTTAGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
*
14559807 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCAGTATG
14559833 C
1 C
14559834 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCAGTATG
Found at i:14562429 original size:26 final size:26
Alignment explanation
Indices: 14562400--14562450 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14562390 CCGGTCTGAT
* *
14562400 CTTATACTTGGAATGAACTCCGTATC
1 CTTAGACTGGGAATGAACTCCGTATC
14562426 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
14562451 GCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.22, G:0.20, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATC
Found at i:14569872 original size:26 final size:26
Alignment explanation
Indices: 14569843--14569894 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
14569833 CCGATCTGAT
14569843 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14569869 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14569895 ACTAAGTCAA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14570128 original size:893 final size:887
Alignment explanation
Indices: 14567117--14590941 Score: 19393
Period size: 893 Copynumber: 26.9 Consensus size: 887
14567107 AGAGAGATCA
** *
14567117 AGCCCAGCATGTGCTATCGCAACCCTCGGTCC-AGTCTGATCTTAGACTAGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
14567181 TG---ATA--GGGAATGAACTCTGTATGCCTAAGTCAAGCCACGAAACGAGCGTGTGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * ** * * * *
14567241 GCCGACCAGAGGGGCGGGATGCGTAAGCCGAGGATCGACCAGGTCCCCCTCTACATGCTATCGAT
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * ** * *
14567306 CCTGCTACCACAACCCTTGGTAC-GGTCCAATCTTAGATTGGGAATGAACTCCGTATGCTTAAGC
195 CCTGCTGCCGCAACCCTCGGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * *
14567370 CAATCAATGAAACGAGCGGACGGGCGAGTGGGCCGACACTACGCCGTCCAGAGAGACGAGATGCG
259 CAACCGACGAAACGA--GG-CGGGCG-G-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
*
14567435 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
319 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
** * *
14567500 ATATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTGGCAA
384 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* *
14567565 GACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATA
449 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT-ACGGTTCGGGATTTTTTAAAATT
* *
14567629 TTTT-GGAAAAGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
513 TTTTCGG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
14567693 CAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTC
577 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* *
14567758 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTGAAATGCTCTTTAAGGGGGT
642 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * * *
14567823 GTGAGTTCTTGAGGTTTGATGAGAGATAGGGGGCCAGTATAAGGGCCAAGTGCTAGCACCCATCG
707 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * *
14567888 CACATCTTGTGCGCACACCCCCCTTGGCCCCTCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
772 CACATCATGTGCGCACACCCCCC--GGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCA-G
* *
14567953 TTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT-ACGGCACCAGCACATGCCCG
834 ------G-T--T-CTCCGACGATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
* * * * *
14568017 AGCCCAGTATGTGCTACCGCAACCCTCGGTCCGGT-TCGATCTTAGGCTGGGAATGAACTCCATA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCT-GATCTTAGACTGGGAATGAACTCCGTA
** * * * * * *
14568081 TGCTTAGACTGGGAATGAACTTAGTATGCCCAAGTCAACCCACGAAATGAGCCTGTGGGTGGTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * ** * *
14568146 G-CGACCAGAGTGGCGGG-TGCGCAAGCCGGGGATTAGTCGGGTCCCCCTCTACGTGCTGTTGAT
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* ** * * * * *
14568209 CCTGCTGTCGTGACCCTTGGACTGGTCCGATCTTAGACTGGGAATGAACTCCATTTGCCTAAGCC
195 CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
14568274 AACCGACGAAACGA-GCGGGC--GGGCGGGCACTACGGCGACTAGAGAGACGGGATGCGCAAGCC
260 AACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * * *
14568336 ATGGATCGATAGGGTGGTAGGTGGGTTTGGGCATATCTTCATATTTCTGCATGCCAATGGCATTT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
14568401 TTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
390 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
** * * * *
14568466 TTATTTTCTATTTTTCACGATTTTT-AAAATGTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCG
455 TCGTTTTCTATTTTTCATGATTTTTGAAACT-TTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * *
14568530 GATGGAGTTTTGGCCCCAAACTTGGTTGACATGATCCTTGTATTTTTGTTGGCATGCA-AAAAAA
519 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
14568594 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAA
584 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
14568659 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
649 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
14568724 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCA
714 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
14568789 TGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGTCAGTCAAGTTCTCCGG
779 TGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC--
*
14568854 TGATGATCCAGCGATGGTGCCCCGATGAAGAAAAAT-ACGGCACCAGCACATGCCCG
841 ----G----A-CGATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
* * * ** * * ** *
14568910 AACCTAGCATGTACTATCGCAACCCTCGGTCTGGTCTGATCTTAGACTGCAAATGAACTTCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14568975 GCTTAGAC-GAGGTATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTTCGGGCGCTCA
66 GCTTAGACTG-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
*** * * ** * * * *
14569039 ATAGGCTAGAGGGGCGAGATGCATAAGCTGAGGATCAG-CAGGGTACCCCTCTGCGTGCTGTCGA
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGA
** **
14569103 TCCTGCTATCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
194 TCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * * *
14569168 CAACCGACGAAACGAGCGGGTGGGCGGAAGGGCGAGTACTAGGTCGACGAGAGAGACGAGATGCG
259 CAACCGACGAAACGA---GGCGGGCGG--GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * *
14569233 CAAGCCATCGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
319 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
*
14569298 CAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
384 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * ** *
14569363 GATGACTCGTTTTCTATTTTTCATGATTTTTGAAACGTTTTGTGGTTCGGGATTTTTTTAAATTT
449 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * *
14569428 TTTCGAAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACA
514 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * *
14569493 AAACAATTCAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAACAGTGTCCCTAT
579 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14569558 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTATAATCTCAAATGCTCTTTAAAGGGGTGT
644 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
14569623 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAGCACCCATCGCA
709 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
14569688 CATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCCAATACCGTCGGTCAGGCTC
774 CATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
* *
14569753 TCCGACGATGGTGCCCCGATGACGAAAAATGAGACACCAACACATGCCCG
838 TCCGACGATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
*
14569803 AGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14569868 GCTTAGACTGGGAATGAACTCCGTATGACTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
14569933 CAGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCGTCTACATGCTG-CTGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-GAT
* * * * ** * *
14569997 CCTGCTGCTGCAAGCCTCGGTCCGATCCAATCTTAGACTGGGAACGAACTCCGTGTGCCTAAGCC
195 CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
*
14570062 AATCGACGAAACGAGTGGGCGGGCGGGCTGGCGGGCACTACGCCGAG-CAGAGAGACGGGATGCG
260 AACCGACGAAACGA---GGCGGGCGGG--GGCGGGCACTACGCCG-GCCAGAGAGACGGGATGCG
14570126 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
319 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
* * *
14570191 CCATTTTTATGGCTTGTAAATTGAAACAATGGTCCCTTAAGCCTTCACGTGATGTTTCATGGCAA
384 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * * * **
14570256 GACGACTCATTTTCTATTTTTCATGATTTTCGAAACGTTTTGCGGTTCGAGATTTTTTTTAATTT
449 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
** * * *
14570321 TTTTTGAAGGAGTTCTGGTCCC-AACTTGGTAGATGTGATCCTTGTA-TTTTGTTGGCATGCACA
514 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
14570384 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
579 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
14570449 TTCAAACACTTTAATGGCTAATGGCAGCAAACCTGTATAATCCCAAATGCTCTTTAAGGGGGTGT
644 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
14570514 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGTCCAAGTACTAGCACCTATCGCA
709 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
14570579 CATCATGTGCGCACACCCCCTGGCCCCCCC-ATCGTCGGAACCCCGACGCCGTCGGTCAGGTTCT
774 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * **
14570643 CCGGCGATGGTGCCCCGGTGAAGAAAAAT-ACGGTGCCAACACATGCCCG
839 CCGACGATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
* * *
14570692 AGCCCAGCATATGCTACCACAA----C---CC--TC-GATC-----C---G-AT---CT--G-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14570732 -CTTAGACTGGGAATGAACTCCGTATGACTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14570796 CAGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGATCGGGTCCACCTTTGGGTGCTGTCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* *
14570861 CTGCTGCCGCAACCCTCGGTGC-GATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCC
196 CTGCTGCCGCAACCCTCGGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
14570925 AATCGACGAAACGAGCGGGCGGACGGGCTGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGC
260 AACCGACGAAACGA---GGCGGGCGGG--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * * *
14570990 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCACATTTCTGTGTGGCAATAC
320 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
* * * *
14571055 CATTTTTATGGCTTGTAAATTGAAAAAATGGTCCCTTAACCCTTCACGTGAAGTTTCATGGCAAG
385 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
**
14571120 ACGACTCGTTTTCTATTTTTCATGATTTTTG-AACTTTTTGTGGTTCGGGATTTTTTAAAATTTT
450 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
** *
14571184 TT-GGAATTACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
515 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
14571248 AACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
580 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
14571313 TCAGACACTTTCATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTG
645 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
14571378 AGTTCTCGAGCTTTGATGAGGGATAGGGTGCCAATATAAGGGCCAAGTACCGGCACCCATCGCAC
710 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * **
14571443 ATCATGTGTGCACA-CCCCCGACCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCCC
775 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAAT---GCC-GTC-GG-T---
* * ** * *
14571507 CAGTGATGCTCCGGCGATGGTGCCCCGACAAAGAAAAATGCGACACCAACACATGCCCG
831 CAG-G-TTCTCCGACGATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
* * * * * *
14571566 AGCCCAGCATGTGGTGTCGTAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14571631 GCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAAAGAGCGTGC-GGCTGCTCA
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-GCTCA
* * ** * * * *
14571695 GCCAGCCATAGGGGCGGGATGTACAAGCCGGGGATCGACTC-GGTTCCCCTCTACGTGAT-TCCG
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG-GTCGGGTCCCCCTCTGCGTGCTGT-CG
* * ** ** *
14571758 ATCCTGCTACCACAACCCTCGGTCTGACCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAG
193 ATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
14571823 CCAACCGACGAAACGA-----GC--GGGCAGGCACTACACCGGCTAGAGAGACGGGATGCGCAAG
258 CCAACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * * *
14571881 TCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGTACATCTTCATATTTCTGTGTGCCAATCCCAT
323 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* *
14571946 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGTAAGACG
388 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
14572011 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGATCAGGATTTTTTAAAATTTTTTC
453 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * * *
14572076 AGATGGAGTTTTTGGCCCCAAACTCGATAGATGTGATACTTGTATTTTTGTTGGGATGCACAAAA
518 GGAAGGAG-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
14572141 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTT
582 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14572206 AGACACTTTAATGGCTACTGGCATCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGCGTGAG
647 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
14572271 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
712 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * * *
14572336 CATGTGCGCACACCCTCCCCGGCCACCCCGGTCACTGGAACCGCAATGTCGTCGATCAGGTTCTC
777 CATGTGCGCACA-CC-CCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * * *
14572401 CGGC-A--ATGCTCCG--G-CG----ATG-GTG--CC-TC-GATG---A
840 CGACGATGGTGCCCCGATGAAGAAAAATGAG-GCACCAACACATGCCCG
** * * *
14572432 AG---AG-AAATGCGGCAC-CAACCCTCGGTCCGGT-TCGATCTTAGACTGGGAATGAACTCCAT
1 AGCCCAGCATGTGCTGC-CGCAACCCTCGGTCCGATCT-GATCTTAGACTGGGAATGAACTCCGT
14572491 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
64 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* ** * ** ** *
14572556 AGCCGGCCAGAGGGGCAGGATGCTTAAGTCGGGGATCGACCGGGTTGCCCTCTGCGTTCTGTCGA
129 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
** *
14572621 TCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGG
194 TCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
14572686 CAACCAACAAAACGA-GCGGGC--GGGCGGGCACTACGCCGGCCAGAGAGAGGGGATGCGCAAGC
259 CAACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
14572748 CGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCATGCCATTGCCATT
324 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
* * **
14572813 TTTATGGCTTGTAAATTCATACAGTGGTCCCTTAATCCTTCATTTGAAGTTTCATGGCAAGACGA
389 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * **
14572878 CTCGTTTTCTATTTTTCACGATTTTCGAAACGTTTTACGGTTCAAGATTTTTTAAAATTTTTTCG
454 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* ** * *
14572943 GAAGGGGTTTTTACCCCAAACTTGGTAGACATGATCCTTGTGTTTTTGTTGGCATGCACAAAAAA
519 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
14573008 TTTCAGCTAAAAACTC-AGAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTTTCCCCATTTCA
584 ATTCAGCTAAAAACTCGA-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
14573072 GACACTTTAATGGCTACTGGGAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
648 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
14573137 TCTCGAGGTTTTATG-GTGGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACAT
713 TCTCGAGGTTTGATGAG-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * *
14573201 TATGTGCGCACACCCTCCCCGG-CCCCCCGATCATCAGAACCCCAATGCCGTCGGTTAGGTTCTC
777 CATGTGCGCACA-CC-CCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
** ** * *
14573265 CGGTGATGGTTTCCC-AGTGAAGAAAAAT-ACGGCACCAGCACATGCCTG
840 CGACGATGGTGCCCCGA-TGAAGAAAAATGA-GGCACCAACACATGCCCG
* * * * * *
14573313 AGCCCAGCATGTGCTGCCGTAAGCCTCGGTCTGGTCCGATCTTAGCCTGGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14573378 GCTTAGACTGGGAATGAACTCCTTATGCCTAAGTCAACCCACGACACGAGCGTGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * * * *
14573443 CCGGCCAGAAGGGTGGGATGCGTAA-CTCAGGGATCGGCCAGGTCCCTCGCTACGTGCTGTCGAT
131 CCGGCCAGAGGGGCGGGATGCGCAAGC-CGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * *
14573507 CCTGCTGCCGCAACCCTCGGTGC-GATCCGATCTTAGACTGGCAATGAACTCCGTATGCCTAAGC
195 CCTGCTGCCGCAACCCTCGGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
14573571 CAATCGATGAAACGAGCGGGCGGACGGGCTGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
259 CAACCGACGAAACGA---GGCGGGCGGG--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
*
14573636 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATG
319 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
* *
14573701 CTATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
384 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* *
14573766 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAA-TT
449 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
** * ** *
14573830 TTTCGGAATTACTTTTGGCCCCAAACTTCTTAGACATGATCCTTGTATTTTTGTTGGCATGCACA
514 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
14573895 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
579 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
14573960 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
644 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
14574025 GAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACCAACACCCATTGCA
709 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
**
14574090 CATCATGTGCGCACACCCCCCGG-CCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCT
774 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGG---T
** *
14574154 CCAACGATGCTCCGACGATGGTGCCTTGACGAAGAAAAATGCA-GCACCAACACATGCCCG
836 -------T-CTCCGACGATGGTGCCCCGATGAAGAAAAATG-AGGCACCAACACATGCCCG
* *
14574214 AGCCCAGCATGTGCTGCTGTAA-CC-C--T-C-A---G----T---CT-GG--T---CT--G-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
*
14574254 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * **
14574318 CTGGCCAGTA-GGACGGGATGCGCAAGTCGGGGATCGGCCGGGTCCCCCT-TCGCATGCTACCGA
131 CCGGCCAG-AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT-GCGTGCTGTCGA
* * * * *
14574381 TCCTGCAGCCACAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATACCTAAGC
194 TCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
14574446 CAACCGACG-AA--A------------C--G----A-----G-C-G-G-G-CGGG-TG-G--A--
259 CAACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
14574474 CG-GGATCGATAGGGTGGTAGGTGGGTTTTA-GCACATCTTCATATTTCTGCGTGCCAATGCCAT
324 CGTGGATCGATAGGGTGGTAGGTGGG-TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* *
14574537 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAGG
388 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
** ** *
14574602 ACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGTGGTTCGGTATTTTTTAAAATTTTTTC
453 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* *
14574667 GGAAGGAGTTTT-ACACCCAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAA
518 GGAAGGAGTTTTGGC-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
14574731 AAATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTC
582 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14574796 AAACACTTTACTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
647 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
14574861 TTCTCGAGGTTTGATGAGGGATAGGGGG-CAATACAAGGGCCAAGTACCAGCACCCATTGCACAT
712 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * * *
14574925 CATGTGCGCACACCCTCTTCGG-CCCCCCGATCATCGGAACCCTAATGCCTTCGGTTAGGTTCTC
777 CATGTGCGCACACCC-C-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* *** * *
14574989 CGGCGATGGTTTACC-AGTGAAGAAAAAT-ACGGCACCAGCACATGCCTG
840 CGACGATGGTGCCCCGA-TGAAGAAAAATGA-GGCACCAACACATGCCCG
*
14575037 AGCCCAGCATGTGCTGCCGTAA-CC-C--T-CG----G----T---CT--G---G---TCCG-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
14575077 -CATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGACACGAGCGTACGGGCACTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14575141 CCGGCCAGAAGGGTGGGATGCACAAGTCGGGGATCGGTCGGGTCCCCCGCTACGTGCTGTCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * **
14575206 CTGCTGCCGTAACCCTCAGG-CCGGTCTGATCTTAGACTGGGAATGAACTCCTTATAACTAAGCC
196 CTGCTGCCGCAACCCTC-GGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
14575270 AACCGACGAAACGA-GCGGAC--GGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
260 AACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
14575332 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGGCATTT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* *
14575397 TTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCGAGACGAC
390 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
14575462 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGATTCGGGATTTTTTAAAATTTTTTCGA
455 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * * *
14575527 AAGGATTTTTGGTCCCAAACTTGGTAAACGTGATCATTGTATTTTTGTTGGCATGCACAAAAAAA
520 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
14575592 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCAAA
585 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14575657 CATTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAAT-CTTCTTTAA-GGGGTGTGAGTT
650 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC-TCTTTAAGGGGGTGTGAGTT
*
14575720 CTCGTGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAATATAAGGGCCAAGTACCAGCACC
714 CTCGAGGTTTGATGAGGGATA----G--------GGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * *
14575785 CATCACACATCATGTGCGCATACCCCCCCGGGCCCCCCGATCGCCGGAACCTCAATGCCATCGGT
767 CATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGT
* * * * *
14575850 CAGGTTCTCTGGCGATGGTGCCCCTA-CAAGGAAAAATGCA-GCACCAGCACATGCCCG
831 CAGGTTCTCCGACGATGGTGCCCCGATGAA-GAAAAATG-AGGCACCAACACATGCCCG
* * * * * * * *
14575907 AGCCCAACTTGTGCTGCTGCAACCCTCGGTCTGGTCTGAACTTAAACT-GGAATGAA-TCAGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
14575970 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAACGAGCGAGTGGGCACTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
14576035 CCGCCCAAAGGGGCGGG-T-CGATCAAGCCGGGGATCTGTCGGGTCCCCCTCTGCGTCCTATCGA
131 CCGGCCAGAGGGGCGGGATGCG--CAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
* * ** * * * *
14576098 TCCTACTACCATAATCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTACGCTTAGAT
194 TCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA-A-
** * ** * ** * *
14576163 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGC--CTGCAGGCGCT-CAGCCGGC
257 ---G--CCAA--CCG-A---C---G--AA---ACGAGGCGGGCGGGGGCGGGCACTAC-GCCGGC
* * * * * * * ** ** * * * * *
14576225 CAGAGGGGCAGGATGAGAAAGTCGGGGATCGACCGGGTCCCCCTCTACGT-GCTGT-CG-ATCCT
302 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT-----GGTAGGTGGGTTTAGGCA-CAT
** *** ** * * * ** * *
14576287 ACTGTCGCAACCCTTG-GT-CCGGT-CTGA-TCTTA-GACTATG--AATGAACTCCGTAT-G--C
361 -CT-TCATATTTC-TGCGTGCCAATGC-CATTTTTATGGCT-TGTAAATTCA-TAC-AATGGTCC
** ** ** * * * * *** ****
14576342 C-TAAGCCAACCGACGAAACGAGCGT-GTGGGC-GGGCGGGC-CG-GCACTACGTCGGCCA-GA-
419 CTTAAGCC-TTC-ACGTGA--AGTTTCAT-GGCAAGAC-GACTCGTTTTCTA--TTTTTCATGAT
* **** * ** * ** ** * * * *
14576400 ----GAGACGGGATACGCAAG-CCGTGGA---TCGATAAGGTGGTAGG--TGAGTTTAGG-CAC-
476 TTTTGAAACTTTTTACG---GTTCG-GGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* ** **** * * * * * * *
14576453 ATCTTCATATTTTTGCATGCCAATGCCATTTTT-ATGGCTTGTA-AATTCATACAATGGTC-CCT
537 AACTTGGTAGACGTG-AT-CC-TTG-TATTTTTGTTGGCATGCACAA---A-AAAAT--TCAGCT
* ** * *** * * *** ** * * * **
14576515 TAAGCCTTCACGTGAAGT-TTCATA-A-CAAGACGACTCGTTT--TCTATTTTTCACGATTTTTG
592 AAAAAC-T--C--GAAGTGTACA-AGATTTTG-TGAC-CATTTGAAAAAAGTGTCCCCATTTCAG
* * * * *** * * * * * * **
14576575 AAACTTT-TTGCGGT--T--CGGC-ATTTTTTAAAATTTTTTGAAAGGATTTTTGACCCCAAACT
649 ACACTTTAATG-GCTACTGGCAGCAAACCTGTAAAA---TCTCAAATGCTCTTT-------AAGG
* * * * * ** * ****** * * * **
14576634 TGGTAGACATGA-TCCTTGTA-TTTTCGTTGGCATGCACAAAAAAATTCAGCTAAAAGCTCGCTG
703 GGGT-G---TGAGTTCTCG-AGGTTT-GAT-G-A-G-GGATAGGGGGCCA-ATATAAG--GGCCA
* * ** * * * *** * * * * * **** *
14576697 TGTACAAG-A--TTTTGTGAC--CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
755 AGTACCAGCACCCATCG-CACATCATGTGCGCACA----CCCC---CCGGCCCCCCCGATCGC--
** * *** * * ** ** * * * * *
14576757 CTGG--CAGCAA-ACCTGTAAAATCTCAAATGCTCTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
810 C-GGAACCCCAATGCC-GT---CGGTC--AGGTTC-TCCGACGATG-GTG-CCCCGA----TGAA
** * * * * * *
14576819 GAGGGAAGGGGGCCAACATAAAGGGCCAAGTACC-
861 GA-AAAATGAGG-CACCA-ACA----CATG-CCCG
** * * *** ** **
14576853 AGCACCCATCGCACAT-CATGTCGCACACCCCCCGG-CCCCCCTGATCGGTCGGAAC--CCAATG
1 AG--CCCA--GCATGTGC-TGCCGCA-A-CCCTCGGTCCGATCTGATC--TTAG-ACTGGGAATG
* * * * * * * * * *
14576914 -CCGCGGTCAGGTG-TT--CCCGGCCG-ATG-CCTCC-TACG-AT-GGTGC--CCAAC-AAA-GA
56 AACTCCGT-A--TGCTTAGACTGG--GAATGAACTCCGTATGCCTAAGT-CAACCCACGAAACG-
*** * * * * ** * * * * * **
14576966 AAAATAC-GGCAC-CAGCACCACTGCCCTGA-GCCCAGCATGTTGCTA-CCCGCAACCCCTCGGT
114 AGCGTGCGGGCGCTCAG---C-C-GGCCAGAGGGGCGGGATG-CGCAAGCCGGGGA----TCGGT
* * ** * * *** * ** **
14577027 CCGGT-TCGATCTTAGAC-TG-GGAATCGACTCTTG-TTATGCTTAGACT-GGT-TAAGAAACCT
169 CGGGTCCCCCTC-T-G-CGTGCTG--TCGA-TCCTGCTGCCGC-AACCCTCGGTCT--G--GTCT
* * * * * *
14577086 GTATGCCTTAGACTGGCGAAATG-ACTCTGTATGCCTAAGTCAACCCACAAAACGA---GTG-TG
223 G-AT--CTTAGACTGG-G-AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGGGCGG
* * * * * * * * *** ** *
14577146 TGGC-CGCTC-A-GCCGGCCA-AGGGGACGGAATGTGCTAGCCGGGGATCGGCCGGGTCCCCCTT
283 GGGCGGGCACTACGCCGGCCAGA-GAGACGGGATGCGCAAGCCGTGGATCGATAGGGT---GGTA
* * * * * * *** * * * * **
14577207 TGTGTG-CT-GTC-GATCTTGCCCCTGCAACCCT-C-TATCTAAT-CCGA-TCTTA--GATTGGG
344 GGTGGGTTTAGGCACATCTT---CAT--ATTTCTGCGT-GCCAATGCC-ATTTTTATGGCTTGTA
* * * * * ** * ** * * * ** ***
14577263 AA-TGA-ACTCA-GTTGCC-TCAGCCAACCGACG-AAACG-AGCA-GGC-GGGCGGGCGGGTGGA
402 AATTCATAC-AATGGTCCCTTAAGCC-TTC-ACGTGAA-GTTTCATGGCAAGAC-GACTCGTTTT
* ***** ***** ** ***** * * ** *** ** ** ****
14577320 CGGGCAGGCGGGCACT-ACGCCGGCCA-GAGAGAGGGATGCGCAAGCCATGGATCGATAGGGTCG
462 C---TA-TTTTTCA-TGATTTTTGAAACTTTTTACGG-TTCGGGA-TTTTTTA-AAATTTTTTCG
* * * * * * ** ** * * * *
14577383 TAGGTGGGTTTAGG-CAC-ATCTTCATATTTC-TGCATGCCAATGTCATTTTT-ATGGCTTGTA-
519 GAAG-GAGTTTTGGCCCCAAACTTGGTA-GACGTG-AT-CC-TTGT-ATTTTTGTTGGCATGCAC
** * ** * * *
14577443 AATTCATACCATGGTC--CCATAAGCCTTC-ACGTG---AAG-TTTCATGGCAAGACGACTCGTT
578 AA---A-AAAAT--TCAGCTA-AAAAC-TCGAAGTGTACAAGATTT--T-G--TGACCA-T--TT
**** ** * *** * * * * *** * *
14577501 -TTCTATTTTTCATGATTTCCA-AAACTTT-TTGGGGT--T--CAG-GATTTTTTAAAATTTTTT
627 GAAAAAAGTGTCCCCATTT-CAGACACTTTAAT-GGCTACTGGCAGCAAACCTGTAAAA---TCT
* * * * * * ** * ** *
14577558 CGAAAGGAGT-TTTGGGCCAAACTTGGTTGATGTGA-TCCTTGTATTTTTGTTCGCATGCACAAA
687 C-AAATG-CTCTTT------AA---GG-GGGTGTGAGTTCTCG-AGGTTTGAT-G-A-G-GGATA
****** * * *** * * * ** **** * * * *** *
14577621 AAAATTCAGCTAAAAACTCGAAAT-CTAAAAGATTTTGTGAC--CATTTGAAAAAAGTGTCCCCT
735 GGGGGCCA-ATATAAGGGCCAAGTACCAGCACCCATCG-CACATCATGTGCGCACA----CCCC-
* ***** * * * * * ** *
14577683 TTTCAGAGACTTTAATGGCTACTGGCAGAAAACCTATAAAATCTCATATGCTTTTTAAGGGGGTG
793 ---CCG-G-C---CCCCCCGA-TCGCCG-GAACC--------C-CA-ATGC------CGTCGGTC
* * * * *** ** * * * * * ** * *
14577748 TGAGTTCT-CGAGGTTTGATG-ATGGATAGGGGGCCAATATAAGG-GCCAAGTACCAGCACCC
832 AG-GTTCTCCGACG-ATGGTGCCCCGAT--GAAG-AAAAATGAGGCACCAA-CACATGCC-CG
* * * * * * ** *
14577808 ATCGCACATCATGTGC-G-CACACCCCCTCGGCCCCCCGATCGCTGGAACCCCAATGCCACTGGT
1 A--GCCCAGCATGTGCTGCCGCA-ACCCTCGG---TCCGAT--CT-G-A-TCTTA-G--ACTGGG
* * ** * *** * ***
14577871 CAGGTTCTCCGGCGATGCTTCAGTGA-TGGTGCCCCG-GCGAAGAATAATGCGGC-ACCAG-CAC
52 AATGAACTCC-G-TATGCTT-A--GACTGG-G-AATGAACTCCG--T-ATGC--CTA--AGTCA-
* ** * ** * * * * ** *
14577932 ATGCC-CGAGCCCAGCATGTGCTACCGCAACCCTCAATCCGGTCTGATCTTAGACTGGGAAT--G
102 A-CCCACGAAACGAGC--GTG----CG-GGCGCTC-AGCCGGCCAGA---GGGGC-GGG-ATGCG
* * * ** ** * * ** *
14577994 -AA-CTC-CGTAT--GCCTAAGTCAACCTATGAGACGAGC-GTGCGGGCGCTCAGCTGGC-CATA
153 CAAGC-CGGGGATCGGTC-GGGTCCCCCTCT--G-CGTGCTGT-CGATC-CT--GCTGCCGCA-A
*** * ** * * ** ** * * * * ** *
14578052 AGGTTGGGATGCG-C-AAGCCGTT-GA-TCGGTCA-GGTCCCCCTCTGCGTGCTGTCAATCCTG-
208 CCCTCGGTCTG-GTCTGA-TC-TTAGACT-GGGAATGAACTCCGTATGCCT-AAGCCAA-CC-GA
** ** ** ** * * ** ** * *
14578111 CTGCCAC-AAAC-CTC-GGTCCGGTCTGATCTTA-GACTGGGAATGA-ACTCTGTATGC-CTAAG
266 C-GAAACGAGGCGGGCGGGGGCGGGC--A-C-TACG-CCGGCCA-GAGAGACGGGATGCGC-AAG
*** * * * ** ** * * *** *
14578170 CCAACCGA-CGAAACGAGCGGGCGGATGGGCACTACGC-C-TGC--CAGAGAGAC-GGGATGCAC
323 CC-GTGGATCGATA-GGGTGGTAGG-TGGG-TTTAGGCACAT-CTTCATA-TTTCTGCG-TGC-C
* ** * *** * *
14578229 AAGCTGTGGATCGATAGGGTGGTAGGTGGGTT-TAGGCACATCTTCATATTTCTGCATGCC--AA
380 AA----T-G--CCAT----TTTTA--TGGCTTGTA---A-A--TTCATA-CAATG-GTCCCTTAA
* * * * * ** * *
14578291 TGTCATTTTTATGGCTTGTAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTC-ATGG
424 -G-C--CTTCA---CGTG-AAGTT--T--CATGG---C--AAGACGACTCGT----TTTCTAT-T
**** * * **
14578355 CAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTATGGGGTTCGGGATTTTTTAAAA
467 TTTCATGA-T--TTTT-----------G-------AAACTTTTTACGGTTCGGGATTTTTTAAAA
* * * *
14578420 TTTTTTCGGAAGGAGTTTTGG-GCCAAACTTGGTTGATGTGATCCTTGTATTTTTGTTCGCATGC
511 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * *
14578484 ACAAAAAAATTCAGCTAAAAACTCGAAATCTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
576 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
** * * *
14578549 TTTTTCAGAGACTTTAATGGCTACTGGCAGAAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGG
641 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
14578614 TGTGAGTTCTCGAGGTTTGATGACGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATC
706 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
14578679 ACACATCATGTGCGCACACCCCCTCGG-CCCCCCGATCGCTGGAACCCTAATGCC-ACTGGTTAG
771 GCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GGTCAG
* * *
14578742 GTTCTCCGGCGATGCTCCAGTGATGGTGCCCCGGTGAAGAATAATGCGGCACCAACACATGCCCG
834 GTTCT-C--CGA-----C---GATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
* *
14578807 AGCCCAGCATGTGCTGCCGTAA----C---CC--TC-GA---T---CT--G---G---TCC-AAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
14578847 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTATGAGACGAGCGTCCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * ** * * *
14578911 CTGGCCATAGGGTTGGGATGCGCAAGCCGTGGATCGGTCAGGTCCCCCTCTGCGTGCTGTTGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * *
14578976 CTGCTGCCACAAACCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * **
14579041 ACCGACGAAACGA-GCGGGC--GGATGGGCACTACGCCGGCCAGAGAGACGGGATGTGCAAGCTA
261 ACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * *
14579103 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTACATGCCAATGTCATTTT
326 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
14579168 TATGGCTTGTAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAAACGACT
391 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
** ** *
14579233 CGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGGGGTTCCGGATTTTTTAAAATTTTTTCGGA
456 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * * *
14579298 AGGAGTTTTGG-GCCAAACTTGGTTGATGTGATCCTTGTATTTTTGTTCGCATGCACAAAAAAAT
521 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * * *
14579362 TCAGCTAAAAACTCGAAATCTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCTTTTCAGAG
586 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * *
14579427 ACTTTAATGGCTACTGGCAGAAAACCTATAAAATCTCATATGCTTTTTAAGGGGGTGTGAGTTCT
651 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
14579492 CGAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
716 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* ** * **
14579557 TGCGCACACACACCCGGCCCCCCCGATCATCGGAACCCTAATGCCG-CTGGTCAGGTTCTCCGGT
781 TGCGCACAC-CCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGAC
* **
14579621 GATGGTGCCCCGACGAAGAAAAAT-ACGGCACCAGTACATGCCCG
844 GATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
* ** * *
14579665 AGCCTAGCATGTGCTGCCGCAACCCTCGGTCCGATCCAATCTTAGATTGTGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
*
14579730 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * ** * *
14579795 CCGACCAGAGGGGCGGGAAGCGCAAGTCGGGGATCGACCAGGTCCCCCTCTGCGTGCTGCCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * * * *
14579860 CTTCTACCACAACCCTCAGTCTGATCCGATCTTTGACTGGGAATGAACTCCGTATGCCTAAGCTA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
14579925 ACCGACGAAACGA---GTGAGGGGGCGAGCACTACGCCGGCCAAAGAGACGAGATGCGCAAGCCG
261 ACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
** *
14579987 TGGATCGATAGGGTGGTAGGTGGGTTTACTCACATCTTCATATTTCTGCATGCCAATGCCATTTT
326 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*
14580052 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACT
391 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
14580117 CGTTTTATATTTTTCATGATTTTTTAAAACTTTTTACGGTTTGGGATTTTTTTTAAATTTTTTCG
456 CGTTTTCTATTTTTCATGA-TTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTCG
* * *
14580182 GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCAAAAAAA
519 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAA
*
14580247 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCA
583 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
14580312 GACACATTAATGGCTACT-GCTAGCAAA-GTAGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
648 GACACTTTAATGGCTACTGGC-AGCAAACCT-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
14580375 GTTCTTGAGGTTTGATGAGGGATAGGGGCCCAAAATAAGGGCCAAGCACCAGCACCCATCGCACA
711 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
14580440 TCATGTGCGCACACCACCCTGGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGGCCAGGTTCTC
776 TCATGTGCGCACACC-CCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGG---T-
* * *
14580505 CGGCAATGCTCCGGCAATGCTTCAGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCATCACAT
836 ------T-CT-C--C---G----A-CGATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACAT
*
14580570 GCACG
883 GCCCG
* * *
14580575 AGCCCAGTATCTACTGCCGCAACCCT---T--G----G----T---CT--G---G---TCCG-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
** *
14580615 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCATGCGGTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
14580679 CCGGCCAGAGGGGCAGGATGCGCACGCCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
14580744 TTGCTGCCACAACCCTCGGTTTGGTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCGA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * *
14580809 ACCGAC-AGAACGA-GTAGGCTGGCGGGCGAGCACTACGCTGGCCAAAGACACGGGATGCGCAAG
261 ACCGACGA-AACGAGGCGGGC-GG-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* *
14580872 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGCGCCAATGCCAT
323 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
*
14580937 TTTTATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
388 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* ** **
14581002 ACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCTCGATTTTTTAAAATTTTTTC
453 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
*
14581067 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAAA
518 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
14581132 AACTCAGCT-AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
583 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
14581196 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
648 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
14581261 TCTCGAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
713 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
14581326 ATGTGCGCACACCCCCCCGACCCCCTGATCACCGGAACCCCAATGCCGCCGGTAAGGTTCTTCGA
778 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGG----T---
** * * * * *
14581391 CGATGCTCCGACGATGGTGCCCCGACAAAGAAAAGTGCGGAACCAGCACATGCCTG
836 ---T-CTCCGACGATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
* * *
14581447 AGCCCAGCATGTGCTGCCGCAACCCTCGATCC-AGTTTGATCTTAGACTGGGATTGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGTA
* * ** ** *
14581511 TGC-TAGACTGCGAATGAACTCTGTATTTCTAAGTCAACAAACGAAACAAGCGTGCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * ** * * * *
14581575 ACCGGCCAGAGGGGCTGGATGCACAAGCTAGGGATCGGTCGGGTCCCTCTCTGCGTACTATCAAT
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * * ** *
14581640 CCTACTACTGCAACCCTCAGTCTGGTCCAATCTTACACTGGGAATGAACTCCGTATGCCTAAGCC
195 CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
14581705 AACCGACGAAACGA-GCGGGC--GAGCGGGCGCTATGCTGGCC------A---GA---G--A---
260 AACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* *
14581750 ---GA-C----GGGTGGTAGGTGGGTTTAGGCACAACTTCATATTTCTGCATGCCAATGCCATTT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
14581807 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT-ATGGCAAGATGAC
390 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * ** *
14581871 TGGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTTCAAGATTTTTTAAAATTTTTTCAG
455 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
14581936 AAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAATA
520 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
14582001 TTCAGCTAAAAACT-GAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
585 TTCAGCTAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
14582065 ACACTTTAATGGCTACTTGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTT
649 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
14582130 TTCGAGGTTTGATGAGGGATAGGGGCCCAAAATAAGGGCCAAGTACCAGCACCCATCGCACATCA
714 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
14582195 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAAAGCCGCCGGTCAGGTTCTCCGGT
779 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCC-AA--TGCC-GTC-GG---TCAGGT
* **
14582260 GGTGCTCCGACGATGGTG-CCCGGTGAAGAAAAATGCA-GCACCGGCACATGCCC-
836 --T-CTCCGACGATGGTGCCCCGATGAAGAAAAATG-AGGCACCAACACATGCCCG
* * *
14582313 ATGCCCAGCATGTGCTGCTGTAACCCT---T--G----G-TC-----C-------G-A-TCC-AA
1 A-GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTA
* *
14582353 T-CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * *
14582417 GCCGACCAGAGGGGCGGGAAGCGCAAGTCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGTCGAT
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * * * *
14582482 CCCT-CTACCACAACCCTCAGTCTGATCCGATCTTCGACTGGGAATGAACTCCGTATGCCTAAGC
195 -CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * *
14582546 TAACCGACGAAACGA---GTGAGGGGGCAGGCACTACGCCGGCCAAAGAGACGAGATGCGTAAGC
259 CAACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
14582608 CGTGGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAAATGCCAT
324 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC-AATGCCAT
* *
14582673 TTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACG
388 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * *
14582738 ACTCGTTTTATATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTTAAATTTTTT
453 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTT
* * * * *
14582803 CGGAAGGATTTTTGGCCCCAATCTTGGTAGACGTGATTCTTGTATTTTTTTTGGCATGCAAAAAA
517 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
14582868 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-TGTCCCCATTTC
582 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
14582932 AGACACATTAATGGCTACT-ACTAGCAAACCAGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
647 AGACACTTTAATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14582996 GTTCTCGAGGTTTGATGAGGGATA-GGGGCCAAAATAAGGGCCAAGCACCAGCACCCATCGCACA
711 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
14583060 TCATGTGCGCACACCACCCCGGCCGCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
776 TCATGTGCGCACACC-CCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* *
14583125 CGACGATGCTCCGACAATGCTCCAGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACAT
840 CGACGATG----G----TGC-CC--CGA-----------TGAAGAAAAATGAGGCACCAACACAT
*
14583190 GCACG
883 GCCCG
* * *
14583195 AGCCCAGTATCTGCTGCTGCAACCCT---T--G----G----T---CT--G---G---TCCG-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* ** *
14583235 -CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCATGCGGTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14583299 CCGGCCAGAGGGGCAGAATGCGCACGCCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * *
14583364 CTGCTGCCACAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCGA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * * *
14583429 ACCGACGGAACGA-GTAGGCTGGCGGGCGAGCACTACGCTGGCCAAAGACACGGGATGCGCAAGC
261 ACCGACGAAACGAGGCGGGC-GG-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
14583493 CGTGGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGTGCGCCAATGCCATT
324 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
* *
14583558 TTTATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGA
389 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* ** **
14583623 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCTCGATTTTTTAAAATTTTTTCG
454 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
*
14583688 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAAAA
519 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
14583753 ACTCAGCT-AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAG
584 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
14583817 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
649 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
14583882 CTCGAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
714 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
14583947 TGTGCGCACACCCCTCCGACCCCCCTGATCACCGGAACCCCAATGCCGCCGGTAAGGTTCTTCGA
779 TGTGCGCACACCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGG----T---
** * * * * *
14584012 CGATGCTCCGACGATGGTGCCCCGACAAAGAAAAGTGCGGAACCAGCACATGCCTG
836 ---T-CTCCGACGATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
* *
14584068 AGCCCAGCATGTGCTGCCGCAACCCTCGATCC-AGTTTGATCTTAGACTGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGTA
* ** ** *
14584132 TGC-TAGACTGGGAATGAACTCTGTATTTCTAAGTCAACAAACGAAACAAGCGTGCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * *
14584196 ACCGACCAGAGGGGCTGGATGCACAAGCTGGGGATCGGTCGGGTCCCTCTCTGCGTACTATCGAT
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * ** *
14584261 CCTGCTACTGCAACCCTCAGTCTGGTCCAATCTTACACTGGGAATGAACTCCGTATGCCTAAGCC
195 CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
14584326 AACCGATGAAACGA-GCGGGC--GAGCGGGCGCTATGCCGGCC------A---GA---G--A---
260 AACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* *
14584371 ---GA-C----GGGTGGTA----GG--T-GGCACAACTTCATATTTCTGCATGCCAATGCCATTT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
14584421 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT-ATGGCAAGACGAC
390 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * ** *
14584485 TGGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTTCAAGATTTTTTAAAATTTTTTCAG
455 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* *
14584550 AAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAATA
520 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
14584615 TTTAGCTAAAAACT-GAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
585 TTCAGCTAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * *
14584679 ACACTTTAATGGCTACTTGCAGCAAACCTATAAAATCTTAAATGCTTTTTAAGGGGGTGTGAGTT
649 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
14584744 CTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCA
714 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * *
14584809 TGTGCG-------CCCGGCCCCCACGATTGTCGGAACCCCAACGTCGCCGGTCAAGTTCTCCTG-
779 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC-GA
* *
14584866 CGATGGTGCCTCGACGAAGAAAAAT-ACGGCACCAACACATGCCCG
843 CGATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
** * * * * * *
14584911 AGCGTAGCATGGGCTGTCGCAACCCTCGATCTGATCTTATCTTAGACTGGGAATGAACTCTGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
14584976 GCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
** * * * * * *
14585041 CCAACCAGAGGGGTGGGATGCACAAGCTGGGGATCGGCCGGGT-CCCCTCAGCGTGCTATCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
** * * *
14585105 CCACTACCGTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * ** *
14585170 ATTGGCGAAACGA-GAGGGC--GGGCGGGCACTACGTCAACCAGAGAGACGGGATGCGCAAGTCG
261 ACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
14585232 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
326 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
14585297 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
391 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
14585362 CATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTT-GAG
456 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG-G
* * * * *
14585426 AAGGACTTTTGGCCCCAAACTTGGTAGACGTTATCATTTTAATTTTT-TTGGCATGCAAAAAAAA
520 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-ATTTTTGTTGGCATGC-ACAAAAA
* **
14585490 AATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTAATTTCA
583 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
14585555 GACGCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
648 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * * *
14585620 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACTAGTATCCATCGCACATC
713 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
14585685 ATGTGTGCACACCCCCCGGCCCCCCTGATCGCCGGAACCCCAATGTCTCCAATAAGGTTCTCCGA
778 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATG---CC-GT-CGG---T-C-A
* * * * *
14585750 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACTTGCCCG
833 -GGTTCTCCGACGATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
* * * *
14585806 AGCCCAGCATGTCCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGATTGGGAATGAACTCCGTA-
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
14585870 ---T-G-C---GAA--AA-T-C--A-ACCT-A-T--------GAAATGAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * *
14585910 CCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCCGGTCCCTCTCTACGTGTTGTCGATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * *
14585975 CGGCGGCCGCAACCCTCGGTCCGATCTGATCTTAGACTTGGAATGAACTCCGTATGCCTAAGCCA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
14586040 ACCGACGAAACGAGGGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
261 ACCGACGAAACGA---GGCGGGC-GG-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * * *
14586105 AGCCGCGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTTTGTGTGCCAAAGCC
321 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
* * * * *
14586170 ATTTTTATGGCATATAAATTCATACAATGGTCTCTTAAGCTTTCACATGAAGTTTCATGGCAAGA
386 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * *
14586235 CGACTCGTTTTTTGTTTTTCATGATTTTTAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTT
451 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * **
14586300 TCGGGAGGCGTTTTGGCCCCAAACTTGGTAGACGTGATACTTGTATTTTTGTTGGTGTGCACAAA
516 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
14586365 AAATTTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
581 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
14586430 TAGACATTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
646 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14586495 GTTCTCGAGGTTTTATGAGGGATAGCGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
711 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
14586560 TCATGTGCGCACACCCCCCGACCCCCCCGATCACCGGAACCCCAATGCCGTCGGTAAGGTTCTCC
776 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT-C
* * * * * *
14586625 GACGATGCTCCGATGATGGTGCCCCGGTAAAGAAAAATGCGGAACCAGCACATGCCTG
840 --CGA-----C---GATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
** * *
14586683 AGCCCAGCATGTGCT-ATGACAACACTCGGTCCAGTTC-GATCTTAGACTGGGAATGAACTCCGT
1 AGCCCAGCATGTGCTGCCG-CAACCCTCGGTCC-GATCTGATCTTAGACTGGGAATGAACTCCGT
* *** *
14586746 ATGC-TAGAGTGGGAATGAACTCCGTATGCCTAAGTCAATAAACGAAACGAGCGTACGGGCGCTC
64 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * * *
14586810 AACCGGCCAGAAGGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCTCTCTGCGTGCTGTTGA
129 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
* * * ** * *
14586875 TCCTACTTCTGCAACCCTCGGTCTGGTCCAATCTTAGACTGAGAATGAACTTCGTATGCCTAAGC
194 TCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* *
14586940 CAACCGACGAAACGA-GCGGGC--GGGCAGGCGCTACGCCGGCC------A---GA---G--A--
259 CAACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
14586986 ----GA-C----GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACTTGCCAATGCCATT
324 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
*
14587042 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTT-ATGGCAAGACGA
389 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * *** *
14587106 CTGGTTTTCTATTTTTCATGATTTTCGGAACTTTTTGCGGTTCAAAATTTTTTAAAATTTTTTCA
454 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* *
14587171 GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAT
519 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
14587236 ATTCAGCTAAAAACT-GAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
584 ATTCAGCTAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
** * *
14587300 GACACTTTAATGGCTACTTACAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGTGGTGTGAGT
648 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
14587365 TCTCGAGGTTTGATGAGCGATAAGGGGCCAATATAAAGGACAAGTACCAGCACCCATCGCACATC
713 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** * * * * *
14587430 ATGT--G--TA---CCCAACCCCCCCGATTGTCGGAACCCCAATGTCGCCGGTCAAGTTCTCCGA
778 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* *
14587488 CGATGGTGCCTCGGTGAAGAAAAAT-ACGGCACCAACACATGCCCG
843 CGATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
* * * *
14587533 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGT-TCAATCTTAGACTGGGAATGAACTTCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCT-GATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
14587597 TGCTTAGACTGGGAATCAACTCCATATGCCTAAGTCAACCCACGAAATGAGCATGTGGGTGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * *
14587662 GCCAGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGTCGGGT-CCCCTCAGCATGCTGTCGAT
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * * * * *
14587726 CCTACTACCGTAACCCTTGGTCTGGTCTGATGTTAGACTGGGAATGAACTCTGTATGCATAAGCC
195 CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * ** * *
14587791 AATCGACGAAACGA-ACGGGC--GGGCCGGCACTACATCGACCAGAGAGACGGGATGCGCATGCC
260 AACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
*
14587853 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
14587918 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC-AC
390 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * ** * *
14587982 TCATTTTCTATTTTTCACGATTTTTGAAACTTTTGGCGGTTTGGGATTTTTTAAAATTTTTTCAG
455 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * * * * * * *
14588047 AAGGACTTTTGTCCCCAAACTTGGTAGACGTTATCTTTTTATTTTTTTTTGCATGCAAAAAAAAA
520 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
14588112 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
585 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14588177 CGCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
650 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
14588242 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTATCTATCGCACATCAT
715 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
14588307 GTGCGCACACCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGTCATCGATAAGGTTCTCCGACG
780 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATG-C--CG-T-CGG---T-C-A-G
* * * *
14588372 ATGCTCCGATGATGGTGCCCCGATGAAGAAAAATGTGGCACCAACACATGCCCG
834 GTTCTCCGACGATGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
*
14588426 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-AGTCCGATCTTAGACTGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGTA
* * ** * * * *
14588490 TGCATAGACTGGGAATGAACTTCGTATGCCTAAGTCAACTTATGAAACGAGCGTACGGGTGCTTA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * *
14588555 GTCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCCGGTCCCCCGCTGCGTGTTGTCGAT
130 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGAT
* *
14588620 CCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTTGGAATGAACTCCGTATGCCTAAGCC
195 CCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
14588685 AACCGACGAAACGA-GCAGGC--AGGCGGCCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCC
260 AACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
** * * * ** *
14588747 GCAGATCGATAGGGTGGTAGGTTGGTTTGGGCACAGCTTCATATTTCTGTATGCCAAAGCCATTT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* *
14588812 TTATGGCATGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGAC
390 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
14588877 TCGTTTTTTATTTTTCATGATTTTTAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGG
455 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * * **
14588942 AAGGTGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTAGTGTGCACAAAAAAA
520 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
14589006 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
585 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14589071 CACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
650 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
14589136 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCGCACATCCT
715 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * ** * *
14589201 ATGCACACACCGCCTCGG-CCCCCGGATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCCAAC
780 GTGCGCACACC-CCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
* *
14589265 GGTGGTGCCCCGGTGAAGAAAAAT-ATGGCACCAACACATGCCCG
844 GATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
* ** * * * *
14589309 AGCCTAGCATGTTTTGCCGAAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTTCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * *
14589374 GCTTAGACTGGGAATAAACTCCGTATGCCTAAGTAAACCCATGAAACGAGCGTACGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
** * * * * * ** *
14589439 CCGGTTAAAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCGTATGCATGCTACCAATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
14589504 CTGCTGCTGTAACCCTTGATCTGGTCTAAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14589569 ACCGACGAAACGA-GCGGGCGGGCGG-GTAGGCACTACGTCGGCCAAAGAGACGGGATGCGCAAG
261 ACCGACGAAACGAGGCGGGCGGG-GGCG--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * *
14589632 CCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCTAT
323 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* *
14589697 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGATG
388 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * ** *
14589762 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCCATTTGGGATTTTTTAAAATTTTTTC
453 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
*
14589827 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGTTCCTTGTATTTTTGTTGGCATGCAC--AAA
518 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
14589890 AATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCG
583 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14589955 GACACTTTAATGGCTACTAGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
648 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
14590020 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGAACATC
713 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
14590085 ATGTGCGCACACCCCCTGGCCCCCCCGATCGACGGAACCCCAATGCCGCCAGTCAGGTTCTCGAC
778 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC--C
*
14590150 GATGCTCCGACAATGGTGCCCCGACGAAGAAAAAT-ACGGCACCAACACATGCCCG
841 GA-----CG---ATGGTGCCCCGATGAAGAAAAATGA-GGCACCAACACATGCCCG
14590205 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG----G-TC-----C---G-AT---CT---TA-
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
** * * *
14590249 ---T--ACTGGGAATGAACTTTGTATGCGTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * *
14590309 CTGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCAGCCGGGTCCCCCTCTGAGTGCTGCCAATC
131 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * * *
14590374 CTGCTGCCGCAAACCTCGATCCGGTTTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGGCA
196 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14590439 ACCGACGAAACGA-GCGGGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
261 ACCGACGAAACGAGGCGGGC-GG-GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * ** *
14590503 CATGGATCGATAGGGTGGTAGGT--G----GGCACATCTTCATATTTCTACAAGCCAATTCCATT
324 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
*
14590562 TTTATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCCTTCACGTGAAGTTTCATGGCAAGACG
389 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTGAAGTTTCATGGCAAGACG
** * *
14590627 ACTCGTTTTCTATTTTTCACAATTTTAGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTT
453 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTT
* * *
14590692 TGGAAGGTGTTTTGG-CCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTT--CATGTGCACAA
517 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA--TGCACAA
* *
14590754 AAAAATTCAGCTAAAAACTCGAAGTGTACAATATTTTGTGACCATTTGAAAAAATTGTCCCCATT
580 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
14590819 TCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
645 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
14590884 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCC
710 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
14590942 GATCAAGTTC
Statistics
Matches: 18895, Mismatches: 2804, Indels: 2485
0.78 0.12 0.10
Matches are distributed among these distances:
821 2 0.00
822 3 0.00
823 243 0.01
824 6 0.00
826 1 0.00
831 1 0.00
832 220 0.01
833 220 0.01
834 37 0.00
835 2 0.00
837 2 0.00
838 2 0.00
839 4 0.00
840 3 0.00
841 3 0.00
842 189 0.01
843 207 0.01
844 97 0.01
845 1 0.00
846 1 0.00
847 1 0.00
848 2 0.00
849 5 0.00
850 197 0.01
851 97 0.01
852 5 0.00
853 3 0.00
854 33 0.00
855 4 0.00
856 2 0.00
857 41 0.00
858 413 0.02
859 3 0.00
860 1 0.00
861 195 0.01
862 550 0.03
863 626 0.03
864 112 0.01
865 363 0.02
866 268 0.01
867 420 0.02
868 1069 0.06
869 394 0.02
870 583 0.03
871 19 0.00
872 78 0.00
873 60 0.00
874 83 0.00
875 654 0.03
876 137 0.01
877 520 0.03
878 261 0.01
879 16 0.00
880 17 0.00
881 246 0.01
882 87 0.00
883 528 0.03
884 974 0.05
885 388 0.02
886 346 0.02
887 282 0.01
888 653 0.03
889 142 0.01
890 63 0.00
891 480 0.03
892 294 0.02
893 1139 0.06
894 938 0.05
895 552 0.03
896 75 0.00
897 181 0.01
898 193 0.01
899 22 0.00
900 235 0.01
901 62 0.00
902 150 0.01
903 375 0.02
904 259 0.01
905 50 0.00
906 3 0.00
907 2 0.00
908 4 0.00
909 11 0.00
910 72 0.00
911 10 0.00
912 12 0.00
913 21 0.00
914 8 0.00
915 24 0.00
916 55 0.00
917 27 0.00
918 16 0.00
919 40 0.00
920 23 0.00
921 26 0.00
922 9 0.00
923 6 0.00
924 11 0.00
925 3 0.00
926 11 0.00
927 9 0.00
928 17 0.00
929 23 0.00
930 25 0.00
931 4 0.00
932 18 0.00
933 12 0.00
934 18 0.00
935 25 0.00
936 47 0.00
937 66 0.00
938 6 0.00
939 17 0.00
940 16 0.00
941 13 0.00
942 23 0.00
943 10 0.00
944 14 0.00
945 7 0.00
946 11 0.00
947 200 0.01
948 27 0.00
949 8 0.00
950 35 0.00
951 28 0.00
952 11 0.00
953 29 0.00
954 30 0.00
955 11 0.00
956 21 0.00
957 13 0.00
958 8 0.00
959 9 0.00
960 9 0.00
961 4 0.00
962 18 0.00
963 19 0.00
964 9 0.00
965 5 0.00
966 6 0.00
967 3 0.00
970 2 0.00
971 4 0.00
974 1 0.00
975 1 0.00
976 9 0.00
977 7 0.00
978 12 0.00
979 7 0.00
980 8 0.00
981 12 0.00
982 4 0.00
983 12 0.00
984 9 0.00
985 9 0.00
986 11 0.00
987 17 0.00
988 11 0.00
989 6 0.00
991 5 0.00
992 5 0.00
993 1 0.00
994 1 0.00
995 3 0.00
997 14 0.00
998 5 0.00
999 5 0.00
1000 10 0.00
1001 9 0.00
1002 4 0.00
1003 4 0.00
1004 1 0.00
1007 2 0.00
1008 5 0.00
1009 6 0.00
1010 7 0.00
1011 2 0.00
1014 1 0.00
1015 2 0.00
1016 3 0.00
1019 4 0.00
1020 2 0.00
1021 11 0.00
1022 8 0.00
1023 7 0.00
1024 317 0.02
1025 309 0.02
1026 360 0.02
1027 252 0.01
1028 192 0.01
1029 253 0.01
1030 462 0.02
1031 368 0.02
1032 313 0.02
1033 200 0.01
1034 206 0.01
1035 226 0.01
1036 328 0.02
1037 230 0.01
1038 246 0.01
1039 212 0.01
1040 200 0.01
1041 208 0.01
1042 190 0.01
1043 156 0.01
1044 217 0.01
1045 120 0.01
1046 97 0.01
1047 110 0.01
1048 104 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (887 bp):
AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTAT
GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATC
CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
ACCGACGAAACGAGGCGGGCGGGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
TGGTGCCCCGATGAAGAAAAATGAGGCACCAACACATGCCCG
Found at i:14571642 original size:26 final size:26
Alignment explanation
Indices: 14571606--14571658 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14571596 TCGGTCTGAT
*
14571606 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14571632 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
14571658 C
1 C
14571659 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14572504 original size:26 final size:26
Alignment explanation
Indices: 14572468--14572520 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14572458 CCGGTTCGAT
14572468 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14572494 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14572520 C
1 C
14572521 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14573382 original size:26 final size:26
Alignment explanation
Indices: 14573353--14573405 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14573343 CTGGTCCGAT
*
14573353 CTTAGCCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14573379 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14573405 C
1 C
14573406 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14575759 original size:12 final size:12
Alignment explanation
Indices: 14575742--14575773 Score: 55
Period size: 12 Copynumber: 2.7 Consensus size: 12
14575732 TGAGGGATAG
14575742 GGGGCCAATATA
1 GGGGCCAATATA
14575754 GGGGCCAATATA
1 GGGGCCAATATA
*
14575766 AGGGCCAA
1 GGGGCCAA
14575774 GTACCAGCAC
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
12 19 1.00
ACGTcount: A:0.34, C:0.19, G:0.34, T:0.12
Consensus pattern (12 bp):
GGGGCCAATATA
Found at i:14575979 original size:24 final size:26
Alignment explanation
Indices: 14575947--14575997 Score: 70
Period size: 25 Copynumber: 2.0 Consensus size: 26
14575937 CTGGTCTGAA
14575947 CTTAAACT-GGAATGAA-TCAGTATG
1 CTTAAACTGGGAATGAACTCAGTATG
* *
14575971 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCAGTATG
14575997 C
1 C
14575998 CTAAGTCAAA
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
24 7 0.30
25 8 0.35
26 8 0.35
ACGTcount: A:0.31, C:0.18, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCAGTATG
Found at i:14576166 original size:26 final size:26
Alignment explanation
Indices: 14576130--14576179 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
14576120 CTGGTCTGAT
14576130 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
*
14576156 CTTAGATTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
14576180 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:14576285 original size:185 final size:184
Alignment explanation
Indices: 14575926--14576338 Score: 499
Period size: 185 Copynumber: 2.2 Consensus size: 184
14575916 TGTGCTGCTG
* * * * *
14575926 CAACCCTCGGTCTGGTCTGAACTTAAACTGGAATGAA-TCAGTATGCTTAGACTGGGAATGAACT
1 CAACCCTTGGTCTGGTCTGATCTTAGACTGGAATGAACTCCGTACGCTTAGACTGGGAATGAACT
* * ** *
14575990 CCGTATGCCTAAGTCAAACCACGAAACGAGCGAGTGGGCACTCAGCCGCCCAAAGGGGCGGGTCG
66 CCGTATGCCTAAGTCAAACCACAAAACGAGCCAGCAGGCACTCAGCCGCCCAAAGGGGCGGATCG
** * *
14576055 ATCAAGCCGGGGATCTGTCGGGTCCCCCTCTGCGTCCTATCGATCCTACTACCA
131 AGAAAGCCGGGGATCTGCCGGGTCCCCCTCTACGTCCTATCGATCCTACTACCA
* * *
14576109 TAATCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTACGCTTAGATTGGGAATGAAC
1 CAACCCTTGGTCTGGTCTGATCTTAGACT-GGAATGAACTCCGTACGCTTAGACTGGGAATGAAC
* * * * *
14576174 TCCGTATGCCTAAGTCAACCCACAAAACGAGCCTGCAGGCGCTCAGCCGGCCAGAGGGGCAGGAT
65 TCCGTATGCCTAAGTCAAACCACAAAACGAGCCAGCAGGCACTCAGCCGCCCAAAGGGGC-GGAT
* * * ** *
14576239 -GAGAAAGTCGGGGATC-GACCGGGTCCCCCTCTACGTGCTGTCGATCCTACTGTCG
129 CGAGAAAGCCGGGGATCTG-CCGGGTCCCCCTCTACGTCCTATCGATCCTACTACCA
* *
14576294 CAACCCTTGGTCCGGTCTGATCTTAGACTATGAATGAACTCCGTA
1 CAACCCTTGGTCTGGTCTGATCTTAGACT-GGAATGAACTCCGTA
14576339 TGCCTAAGCC
Statistics
Matches: 193, Mismatches: 33, Indels: 6
0.83 0.14 0.03
Matches are distributed among these distances:
183 24 0.12
184 9 0.05
185 157 0.81
186 3 0.02
ACGTcount: A:0.24, C:0.28, G:0.27, T:0.22
Consensus pattern (184 bp):
CAACCCTTGGTCTGGTCTGATCTTAGACTGGAATGAACTCCGTACGCTTAGACTGGGAATGAACT
CCGTATGCCTAAGTCAAACCACAAAACGAGCCAGCAGGCACTCAGCCGCCCAAAGGGGCGGATCG
AGAAAGCCGGGGATCTGCCGGGTCCCCCTCTACGTCCTATCGATCCTACTACCA
Found at i:14579027 original size:868 final size:869
Alignment explanation
Indices: 14577092--14590941 Score: 15967
Period size: 868 Copynumber: 15.8 Consensus size: 869
14577082 ACCTGTATGC
* ** * * *
14577092 CTTAGACTGGCGAAATG-ACTCTGTATGCCTAAGTCAACCCACAAAACGAGTGTGTGGCCGCTCA
1 CTTAGACTGG-G-AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCA
* * * * * *
14577156 GCCGGCCA-AGGGGACGGAATGTGCTAGCCGGGGATCGGCCGGGTCCCCCTTTGTGTGCTGTCGA
64 GCCGGCCAGAGGGG-TGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGA
* * ** ** * * * *
14577220 TCTTGC-CCCTGCAACCCTCTATCTAATCCGATCTTAGATTGGGAATGAACTCAGT-TGCCTCAG
128 TCCTGCTGCC-GCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
14577283 CCAACCGACGAAACGAGCAGGCGGGCGGGCGGGTGGACGGGCAGGCGGGCACTACGCCGGCCAGA
192 CCAACCGACGAAAC--G-A---------GC--G-GG-C--G--GGCGGGCACTACGCCGGCCAGA
* *
14577348 GAGA-GGGATGCGCAAGCCATGGATCGATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATATTT
237 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * *
14577412 CTGCATGCCAATGTCATTTTTATGGCTTGTAAATTCATACCATGGTCCCATAAGCCTTCACGTGA
302 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
** ** *
14577477 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTCCAAAACTTTTTGGGGTTCAGGA
367 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGA
* * * *
14577542 TTTTTTAAAATTTTTTCGAAAGGAGTTTTGG-GCCAAACTTGGTTGATGTGATCCTTGTATTTTT
432 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * *
14577606 GTTCGCATGCACAAAAAAATTCAGCTAAAAACTCGAAATCTAAAAGATTTTGTGACCATTTGAAA
497 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAA
* * * * * *
14577671 AAAGTGTCCCCTTTTCAGAGACTTTAATGGCTACTGGCAGAAAACCTATAAAATCTCATATGCTT
562 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
*
14577736 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACC
627 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
14577801 AGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCGATCGCTGGAACCCCAATGCCA
692 AGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCGATCGCCGGAACCCCAATGCCG
* * * * * * *
14577866 CTGGTCAGGTTCTCCGGCGATGCTTC-AGTGATGGTGCCCCGGCGAAGAATAATGCGGCACCAGC
757 CCGGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAAC
* * * *
14577930 ACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCAATCCGGTCTGAT
821 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGGTCCGAT
* *
14577979 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTATGAGACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** * * *
14578044 TGGCCATAAGGTTGGGATGCGCAAGCCGTTGATCGGTCAGGTCCCCCTCTGCGTGCTGTCAATCC
66 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * *
14578109 TGCTGCCACAAACCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * *
14578174 CCGACGAAACGAGCGGGCGGATGGGCACTACGCCTGCCAGAGAGACGGGATGCACAAGCTGTGGA
196 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
*
14578239 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGTCATTTTTATG
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
*
14578304 GCTTGTAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
326 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * **
14578369 TTCTATTTTTCATGATTTTCAAAACTTTATGGGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
391 TTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* * * *
14578434 GTTTTGG-GCCAAACTTGGTTGATGTGATCCTTGTATTTTTGTTCGCATGCACAAAAAAATTCAG
456 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* * ** *
14578498 CTAAAAACTCGAAATCTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTTTTTCAGAGACTT
521 CTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14578563 TAATGGCTACTGGCAGAAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAG
586 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* * *
14578628 GTTTGATGACGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCACACATCATGTGCG
651 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * * * *
14578693 CACACCCCCTCGGCCCCCCGATCGCTGGAACCCTAATGCCACTGGTTAGGTTCTCCGGCGATGCT
716 CACACCCCCTCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT
* *
14578758 CC-AGTGATGGTGCCCCGGTGAAGAATAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT
781 CCGA-CGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT
* *
14578822 GCCGTAACCCTCGATCTGGTCCAAT
845 GCCGCAACCCTCGATCTGGTCCGAT
* * *
14578847 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTATGAGACGAGCGTCCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14578912 TGGCCATAGGGTTGGGATGCGCAAGCCGTGGATCGGTCAGGTCCCCCTCTGCGTGCTGTTGATCC
66 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * *
14578977 TGCTGCCACAAACCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * **
14579042 CCGACGAAACGAGCGGGCGGATGGGCACTACGCCGGCCAGAGAGACGGGATGTGCAAGCTATGGA
196 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
14579107 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTACATGCCAATGTCATTTTTATG
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* *
14579172 GCTTGTAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAAACGACTCGTT
326 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* ** *
14579237 TTCTATTTTTCATGATTTTCAAAACTTTTTGGGGTTCCGGATTTTTTAAAATTTTTTCGGAAGGA
391 TTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* * * *
14579302 GTTTTGG-GCCAAACTTGGTTGATGTGATCCTTGTATTTTTGTTCGCATGCACAAAAAAATTCAG
456 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* * * *
14579366 CTAAAAACTCGAAATCTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCTTTTCAGAGACTT
521 CTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * * *
14579431 TAATGGCTACTGGCAGAAAACCTATAAAATCTCATATGCTTTTTAAGGGGGTGTGAGTTCTCGAG
586 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
*
14579496 GTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
651 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* ** * *
14579561 CACACACACC-CGGCCCCCCCGATCATCGGAACCCTAATGCCGCTGGTCAGGTTCT-C--CG--G
716 CACAC-CCCCTCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
** * ** *
14579620 -T-----GATGGTGCCCCGACGAAGAAAAATACGGCACCAGTACATGCCCGAGCCTAGCATGTGC
779 CTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGC
14579679 TGCCGCAACCCTCGGTCCGATCCAATCTTAGATTGTGAATGAACTCCGTAT
844 TGCCGCAA-CC-C--T-CG-----ATC--------TG---G---TCCG-AT
* *
14579730 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
* * * * * * *
14579795 CCGACCAGAGGGGCGGGAAGCGCAAGTCGGGGATCGACCAGGTCCCCCTCTGCGTGCTGCCGATC
65 CCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * * * *
14579860 CTTCTACCACAACCCTCAGTCTGATCCGATCTTTGACTGGGAATGAACTCCGTATGCCTAAGCTA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
14579925 ACCGACGAAACGAGTGAGG-GGGCGAGCACTACGCCGGCCAAAGAGACGAGATGCGCAAGCCGTG
195 ACCGACGAAACGAGCG-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
**
14579989 GATCGATAGGGTGGTAGGTGGGTTTACTCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
*
14580054 TGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * *
14580119 TTTTATATTTTTCATGATTTTTTAAAACTTTTTACGGTTTGGGATTTTTTTTAAATTTTTTCGGA
389 TTTTCTATTTTTCATGA-TTTTTAAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTCGGA
* * *
14580184 AGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCAAAAAAAAA
452 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAA
* *
14580249 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGA
516 TTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14580314 CACATTAATGGCTACT-GCTAGCAAA-GTAGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
581 CACTTTAATGGCTACTGGC-AGCAAACCT-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
14580377 TCTTGAGGTTTGATGAGGGATAGGGGCCCAAAATAAGGGCCAAGCACCAGCACCCATCGCACATC
644 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
*
14580442 ATGTGCGCACACCACCCT-GGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGGCCAGGTTCTCC
709 ATGTGCGCACACC-CCCTCGGCCCCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * *
14580506 GGCAATGCTCCGGCAATGCTTCAGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCATCACATG
772 GACGATGCT-C--C---G----A-CGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATG
* * * * * *
14580571 CACGAGCCCAGTATCTACTGCCGCAACCCTTGGTCTGGTCCGAT
826 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGGTCCGAT
* ** *
14580615 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCATGCGGTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
** * * * *
14580680 CGGCCAGAGGGGCAGGATGCGCACGCCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCT
66 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
14580745 TGCTGCCACAACCCTCGGTTTGGTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCGAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14580810 CCGAC-AGAACGAGTAGGCTGGCGGGCGAGCACTACGCTGGCCAAAGACACGGGATGCGCAAGCC
196 CCGACGA-AAC--G-A-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
***
14580874 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGCGCCAATGCCATTT
256 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
*
14580939 TTATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
321 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * **
14581004 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCTCGATTTTTTAAAATTTTTTCGG
386 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
*
14581069 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAAAAA
451 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
14581134 CTCAGCT-AAAACTC-AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
516 TTCAGCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
14581197 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
580 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
14581262 CTCGAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
645 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
14581327 TGTGCGCACACCCCCCCGACCCCCTGATCACCGGAACCCCAATGCCGCCGGTAAGGTTCTTCGAC
710 TGTGCGCACACCCCCTCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
*** * * * *
14581392 GATGCTCCGACGATGGTGCCCCGACAAAGAAAAGTGCGGAACCAGCACATGCCTGAGCCCAGCAT
775 GATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
** **
14581457 GTGCTGCCGCAACCCTCGATCCAGTTTGAT
840 GTGCTGCCGCAACCCTCGATCTGGTCCGAT
* *
14581487 CTTAGACTGGGATTGAACTCCGTATGCTAGACTGCGAATGAACTCTGTATTTCTAAGTCAACAAA
1 CTTAGACTGGGAATGAACTCCGTA---T-G-C--C---T-AA----G----TC-AA--C--C-CA
* * * * ** *
14581552 CGAAACAAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCT-GGATGCACAAGCTAGGGATCGGTCG
41 TGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG-TGGGATGCGCAAGCCGGGGATCGGCCG
* * * * * * * * ** *
14581616 GGTCCCTCTCTGCGTACTATCAATCCTACTACTGCAACCCTCAGTCTGGTCCAATCTTACACTGG
105 GGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGG
* * * *
14581681 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAGCGGGCGCTATGCTGGCC-
170 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCA
*
14581745 -----A---GA---G--A------GA-C----GGGTGGTAGGTGGGTTTAGGCACAACTTCATAT
235 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
14581786 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
300 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * * * **
14581851 GAAGTTT-ATGGCAAGATGACTGGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTTCAA
365 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGG
* *
14581915 GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
430 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
14581980 TTGTTGGCATGCACAAAAATATTCAGCTAAAAACT-GAAAGTGTACAAGATTTTGTGACCATTTG
495 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTG
* *
14582044 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCAGCAAACCTATAAAATCTCAAATG
559 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * * *
14582109 CTTTTTAAGGGGGTGTGAGTTTTCGAGGTTTGATGAGGGATAGGGGCCCAAAATAAGGGCCAAGT
624 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
*
14582174 ACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGCCGGAACCCCAAA
689 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGG-CCCCCCGATCGCCGGAACCCCAAT
** * *
14582238 GCCGCCGGTCAGGTTCTCCGGTGGTGCTCCGACGATGGTG-CCCGGTGAAGAAAAATGCAGCACC
753 GCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACC
** * * * * * * *
14582302 GGCACATGCCC-ATGCCCAGCATGTGCTGCTGTAACCCTTGGTCCGATCCAAT
818 AACACATGCCCGA-GCCCAGCATGTGCTGCCGCAACCCTCGATCTGGTCCGAT
* * *
14582354 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14582419 CGACCAGAGGGGCGGGAAGCGCAAGTCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGAT-C
* * * * * * *
14582484 CT-CTACCACAACCCTCAGTCTGATCCGATCTTCGACTGGGAATGAACTCCGTATGCCTAAGCTA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
14582548 ACCGACGAAACGAGTGAGG-GGGCAGGCACTACGCCGGCCAAAGAGACGAGATGCGTAAGCCGTG
195 ACCGACGAAACGAGCG-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
*
14582612 GATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCATGCCAAATGCCATTTTT
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-AATGCCATTTTT
* *
14582677 ATGGCTTCTAAATTCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTC
323 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * * *
14582742 GTTTTATATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTTAAATTTTTTCGGA
388 GTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTCGGA
* * * * *
14582807 AGGATTTTTGGCCCCAATCTTGGTAGACGTGATTCTTGTATTTTTTTTGGCATGCAAAAAAAAAT
452 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
14582872 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA-TGTCCCCATTTCAGAC
517 TCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
14582936 ACATTAATGGCTACT-ACTAGCAAACCAGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
582 ACTTTAATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
14583000 TCGAGGTTTGATGAGGGATA-GGGGCCAAAATAAGGGCCAAGCACCAGCACCCATCGCACATCAT
646 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
14583064 GTGCGCACACCACCC-CGGCCGCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
711 GTGCGCACACC-CCCTCGGCC-CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* *
14583128 CGATGCTCCGACAATGCTCCAGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCA
774 CGATGCT-C--C---G----A-CGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCC
* * * * *
14583193 CGAGCCCAGTATCTGCTGCTGCAACCCTTGGTCTGGTCCGAT
828 CGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGGTCCGAT
* * ** *
14583235 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCATGCGGTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
** * * * *
14583300 CGGCCAGAGGGGCAGAATGCGCACGCCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * *
14583365 TGCTGCCACAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCGAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14583430 CCGACGGAACGAGTAGGCTGGCGGGCGAGCACTACGCTGGCCAAAGACACGGGATGCGCAAGCCG
196 CCGACGAAAC--G-A-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* ***
14583495 TGGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGTGCGCCAATGCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
14583560 TATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * **
14583625 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCTCGATTTTTTAAAATTTTTTCGGA
387 CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* *
14583690 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAAAAAC
452 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
14583755 TCAGCT-AAAACTC-AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGA
517 TCAGCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
14583818 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
581 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
14583883 TCGAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
646 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
14583948 GTGCGCACA-CCCCTCCGACCCCCCTGATCACCGGAACCCCAATGCCGCCGGTAAGGTTCTTCGA
711 GTGCGCACACCCCCT-CGGCCCCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
*** * * * *
14584012 CGATGCTCCGACGATGGTGCCCCGACAAAGAAAAGTGCGGAACCAGCACATGCCTGAGCCCAGCA
774 CGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
** **
14584077 TGTGCTGCCGCAACCCTCGATCCAGTTTGAT
839 TGTGCTGCCGCAACCCTCGATCTGGTCCGAT
*
14584108 CTTAGACTGGGAATGAACTCCGTATGCTAGACTGGGAATGAACTCTGTATTTCTAAGTCAACAAA
1 CTTAGACTGGGAATGAACTCCGTATGC----C------T-AA----G----TC-AA--C--C-CA
* * * * * * *
14584173 CGAAACAAGCGTGCGGGCGCTCAACCGACCAGAGGGGCT-GGATGCACAAGCTGGGGATCGGTCG
41 TGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG-TGGGATGCGCAAGCCGGGGATCGGCCG
* * * * * * ** *
14584237 GGTCCCTCTCTGCGTACTATCGATCCTGCTACTGCAACCCTCAGTCTGGTCCAATCTTACACTGG
105 GGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGG
* * * *
14584302 GAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGAGCGGGCGCTATGCCGGCC-
170 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCA
*
14584366 -----A---GA---G--A------GA-C----GGGTGGTA----GG--T-GGCACAACTTCATAT
235 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
14584400 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
300 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * * **
14584465 GAAGTTT-ATGGCAAGACGACTGGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTTCAA
365 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGG
* *
14584529 GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
430 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
14584594 TTGTTGGCATGCACAAAAATATTTAGCTAAAAACT-GAAAGTGTACAAGATTTTGTGACCATTTG
495 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTG
* * *
14584658 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCAGCAAACCTATAAAATCTTAAATG
559 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
14584723 CTTTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGT
624 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * *
14584788 ACCAGCACCCATCACACATCATGTGCG-------CC-CGGCCCCCACGATTGTCGGAACCCCAAC
689 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCC-CGATCGCCGGAACCCCAAT
* * * ** *
14584845 GTCGCCGGTCAAGTTCT----C----CT--G-CGATGGTGCCTCGACGAAGAAAAATACGGCACC
753 GCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACC
** * *
14584899 AACACATGCCCGAGCGTAGCATGGGCTGTCGCAACCCTCGATCTGATCTTATCTTAGACTGGGAA
818 AACACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC-G-----A---T---CT-GG--
14584964 TGAACTCTGTAT
864 T---C-C-G-AT
* * *
14584976 GCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGTGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
** * * * *
14585041 CCAACCAGAGGGGTGGGATGCACAAGCTGGGGATCGGCCGGGT-CCCCTCAGCGTGCTATCGATC
65 CCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
** * * *
14585105 CCACTACCGTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * ** *
14585170 ATTGGCGAAACGAGAGGGCGGGCGGGCACTACGTCAACCAGAGAGACGGGATGCGCAAGTCGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
14585235 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
*
14585300 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCAT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * *
14585365 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTT-GAGAAG
390 TTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG-GAAG
* * * * *
14585429 GACTTTTGGCCCCAAACTTGGTAGACGTTATCATTTTAATTTTT-TTGGCATGCAAAAAAAAAAT
454 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-ATTTTTGTTGGCATGC-ACAAAAAAAT
* * **
14585493 TCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTAATTTCAGAC
517 TCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
14585558 GCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
582 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * * *
14585623 CAAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACTAGTATCCATCGCACATCATG
647 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * ** *
14585688 TGTGCACACCCCC-CGGCCCCCCTGATCGCCGGAACCCCAATGTCTCCAATAAGGTTCTCCGACG
712 TGCGCACACCCCCTCGGCCCCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
** *
14585752 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACTTGCCCGAGCCCAGCATG
776 ATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * * * *
14585817 TCCTGCCGTAACCCTCGGTCCGGTCTGAT
841 TGCTGCCGCAACCCTCGATCTGGTCCGAT
* ** * * * *
14585846 CTTAGATTGGGAATGAACTCCGTATGCGAAAATCAACCTATGAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14585911 CGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCCGGTCCCTCTCTACGTGTTGTCGATCC
66 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
14585976 GGCGGCCGCAACCCTCGGTCCGATCTGATCTTAGACTTGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
14586041 CCGACGAAACGAGGGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGA--------GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * ** *
14586106 GCCGCGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTTTGTGTGCCAAAGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * * *
14586171 TTTTTATGGCATATAAATTCATACAATGGTCTCTTAAGCTTTCACATGAAGTTTCATGGCAAGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14586236 GACTCGTTTTTTGTTTTTCATGATTTTTAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTT
383 GACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * **
14586301 CGGGAGGCGTTTTGGCCCCAAACTTGGTAGACGTGATACTTGTATTTTTGTTGGTGTGCACAAAA
448 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
14586366 AATTTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
513 AAATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
14586431 AGACATTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
578 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
14586496 TTCTCGAGGTTTTATGAGGGATAGCGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
643 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
14586561 CATGTGCGCACACCCCC-CGACCCCCCCGATCACCGGAACCCCAATGCCGTCGGTAAGGTTCTCC
708 CATGTGCGCACACCCCCTCG-GCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * *
14586625 GACGATGCTCCGATGATGGTGCCCCGGTAAAGAAAAATGCGGAACCAGCACATGCCTGAGCCCAG
772 GACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAG
** *
14586690 CATGTGCTATGACAACACTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTCCGTAT
837 CATGTGC--TG-CCGCA-AC---CC---TCGA---T---CT--G---G---TCCG-AT
* *** * * *
14586748 GC-TAGAGTGGGAATGAACTCCGTATGCCTAAGTCAATAAACGAAACGAGCGTACGGGCGCTCAA
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
14586812 CCGGCCAGAAGGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCTCTCTGCGTGCTGTTGATC
65 CCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * ** * *
14586877 CTACTTCTGCAACCCTCGGTCTGGTCCAATCTTAGACTGAGAATGAACTTCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14586942 ACCGACGAAACGAGCGGGCGGGCAGGCGCTACGCCGGCC------A---GA---G--A------G
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
14586987 A-C----GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACTTGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
* *
14587047 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTT-ATGGCAAGACGACTGGT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
*** * *** *
14587111 TTTCTATTTTTCATGATTTTCGGAACTTTTTGCGGTTCAAAATTTTTTAAAATTTTTTCAGAAGG
390 TTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* *
14587176 ATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAATATTCA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
14587241 GCTAAAAACT-GAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
520 GCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
** * *
14587305 TTTAATGGCTACTTACAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGTGGTGTGAGTTCTCG
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * * *
14587370 AGGTTTGATGAGCGATAAGGGGCCAATATAAAGGACAAGTACCAGCACCCATCGCACATCATGT-
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* ** * * * *
14587434 -G--TA-CCCAAC--CCCCCCGATTGTCGGAACCCCAATGTCGCCGGTCA---------A-G-TT
714 CGCACACCCCCTCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
* *
14587482 CTCCGACGATGGTGCCTCGGTGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGC
779 CTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGC
*
14587547 TGTCGCAACCCTCGGTCCGGTTCAATCTTAGACTGGGAATGAACTTCGTAT
844 TGCCGCAA-CC-C--T-C-G----A---T---CT-GG--T---C--CG-AT
* * * * * * *
14587598 GCTTAGACTGGGAATCAACTCCATATGCCTAAGTCAACCCACGAAATGAGCATGTGGGTGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
* * * * *
14587663 CCAGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGTCGGGT-CCCCTCAGCATGCTGTCGATC
65 CCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * * *
14587727 CTACTACCGTAACCCTTGGTCTGGTCTGATGTTAGACTGGGAATGAACTCTGTATGCATAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** * *
14587792 ATCGACGAAACGAACGGGCGGGCCGGCACTACATCGACCAGAGAGACGGGATGCGCATGCCGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
14587857 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
* *
14587922 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC-ACTCAT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * ** * *
14587986 TTTCTATTTTTCACGATTTTTGAAACTTTTGGCGGTTTGGGATTTTTTAAAATTTTTTCAGAAGG
390 TTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* * * * * * * *
14588051 ACTTTTGTCCCCAAACTTGGTAGACGTTATCTTTTTATTTTTTTTTGCATGCAAAAAAAAATTCA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
*
14588116 GCTAAAAACTC-AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACGC
520 GCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
14588180 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * *
14588245 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTATCTATCGCACATCATGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* ** * *
14588310 CGCACACCCCCT-GGCCCCCCCGATCGCCGGAACCCCAATGTCATCGATAAGGTTCTCCGACGAT
714 CGCACACCCCCTCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * *
14588374 GCTCCGATGATGGTGCCCCGATGAAGAAAAATGTGGCACCAACACATGCCCGAGCCCAGCATGTG
778 GCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTG
14588439 CTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTAT
843 CTGCCGCAA----C---CC--T-CGA---T---CT--G---G---TCCG-AT
* * ** * * *
14588491 GCATAGACTGGGAATGAACTTCGTATGCCTAAGTCAACTTATGAAACGAGCGTACGGGTGCTTAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
* * * * *
14588556 TCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCCGGTCCCCCGCTGCGTGTTGTCGATC
65 CCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
* *
14588621 CTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTTGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * **
14588686 ACCGACGAAACGAGCAGGCAGGCGGCCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGCAG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * * * *
14588751 ATCGATAGGGTGGTAGGTTGGTTTGGGCACAGCTTCATATTTCTGTATGCCAAAGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
* *
14588816 GGCATGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * *
14588881 TTTTTATTTTTCATGATTTTTAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGG
390 TTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* * * **
14588946 TGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTAGTGTGCACAAAAAAATTCA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
*
14589010 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
520 GCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
14589075 TTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGA
585 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
14589140 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCGCACATCCTATGC
650 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * *
14589205 ACACACCGCCTCGGCCCCCGGATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCC-A--A---
715 GCACACCCCCTCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGC
** * **
14589264 --CG--G-TGGTGCCCCGGTGAAGAAAAATATGGCACCAACACATGCCCGAGCCTAGCATGTTTT
780 TCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCT
*
14589324 GCCGAAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTTCGTAT
845 GCCGCAA--C-C---C---T-CGA---T---CT-GG--T---C--CG-AT
* * * *
14589374 GCTTAGACTGGGAATAAACTCCGTATGCCTAAGTAAACCCATGAAACGAGCGTACGGGTGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
** * * * * * * * ** *
14589439 CCGGTTAAAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCGTATGCATGCTACCAATC
65 CCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
14589504 CTGCTGCTGTAACCCTTGATCTGGTCTAAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14589569 ACCGACGAAACGAGCGGGCGGGCGGGTAGGCACTACGTCGGCCAAAGAGACGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* *
14589634 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCTATTT
256 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
14589699 TTATGGCTTGTAAATTCATACAATGGTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGATGAC
321 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * ** *
14589764 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCCATTTGGGATTTTTTAAAATTTTTTCGG
386 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
*
14589829 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGTTCCTTGTATTTTTGTTGGCATGCAC--AAAAA
451 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
14589892 TTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGA
516 TTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
14589957 CACTTTAATGGCTACTAGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
581 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
14590022 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGAACATCAT
646 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
14590087 GTGCGCACACCCCCT-GGCCCCCCCGATCGACGGAACCCCAATGCCGCCAGTCAGGTTCT-CGAC
711 GTGCGCACACCCCCTCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* ** *
14590150 GATGCTCCGACAATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCAT
775 GATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* *
14590215 GTGCTGCCGCAACCCTCGGTCCGGTCCGAT
840 GTGCTGCCGCAACCCTCGATCTGGTCCGAT
* ** * * * *
14590245 CTTATACTGGGAATGAACTTTGTATGCGTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14590310 TGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCAGCCGGGTCCCCCTCTGAGTGCTGCCAATCC
66 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * *
14590375 TGCTGCCGCAAACCTCGATCCGGTTTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGGCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
14590440 CCGACGAAACGAGCGGGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCA
196 CCGACGAAACGAGCGGGCGGGC----GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
14590505 TGGATCGATAGGGTGGTAGGT--G----GGCACATCTTCATATTTCTACAAGCCAATTCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
14590564 TATGGCTTGTAAATTCATACAACGGTCCCTTAAGCCCTTCACGTGAAGTTTCATGGCAAGACGAC
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
14590629 TCGTTTTCTATTTTTCA-CAATTTTAGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTT
386 TCGTTTTCTATTTTTCATGATTTTTA-AAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTC
* *
14590693 GGAAGGTGTTTTGG-CCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTT--CATGTGCACAAA
449 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA--TGCACAAA
* * *
14590755 AAAATTCAGCTAAAAACTCGAAGTGTACAATATTTTGTGACCATTTGAAAAAATTGTCCCCATTT
512 AAAATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
14590820 CAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
577 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14590885 GTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCC
642 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
14590942 GATCAAGTTC
Statistics
Matches: 11314, Mismatches: 1220, Indels: 878
0.84 0.09 0.07
Matches are distributed among these distances:
842 157 0.01
843 165 0.01
844 65 0.01
845 7 0.00
846 4 0.00
847 8 0.00
848 7 0.00
849 5 0.00
850 182 0.02
851 93 0.01
852 4 0.00
853 1 0.00
854 37 0.00
855 2 0.00
856 7 0.00
857 2 0.00
858 60 0.01
859 6 0.00
860 3 0.00
861 165 0.01
862 269 0.02
863 13 0.00
864 75 0.01
865 103 0.01
866 33 0.00
867 466 0.04
868 2085 0.18
869 461 0.04
870 452 0.04
871 8 0.00
872 101 0.01
873 102 0.01
874 7 0.00
875 487 0.04
876 128 0.01
877 498 0.04
878 271 0.02
879 14 0.00
880 20 0.00
881 255 0.02
882 81 0.01
883 498 0.04
884 984 0.09
885 157 0.01
886 462 0.04
887 321 0.03
888 464 0.04
889 2 0.00
890 3 0.00
891 7 0.00
892 9 0.00
893 205 0.02
894 570 0.05
895 135 0.01
896 60 0.01
897 138 0.01
898 146 0.01
899 1 0.00
900 2 0.00
901 3 0.00
902 176 0.02
903 1 0.00
905 1 0.00
906 1 0.00
908 1 0.00
909 2 0.00
910 56 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (869 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCC
TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCTCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT
CCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTCGATCTGGTCCGAT
Found at i:14579734 original size:26 final size:26
Alignment explanation
Indices: 14579705--14579757 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14579695 CCGATCCAAT
* *
14579705 CTTAGATTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14579731 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14579757 C
1 C
14579758 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14581528 original size:25 final size:25
Alignment explanation
Indices: 14581489--14581536 Score: 69
Period size: 25 Copynumber: 1.9 Consensus size: 25
14581479 AGTTTGATCT
* *
14581489 TAGACTGGGATTGAACTCCGTATGC
1 TAGACTGCGAATGAACTCCGTATGC
*
14581514 TAGACTGCGAATGAACTCTGTAT
1 TAGACTGCGAATGAACTCCGTAT
14581537 TTCTAAGTCA
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
25 20 1.00
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (25 bp):
TAGACTGCGAATGAACTCCGTATGC
Found at i:14584144 original size:25 final size:25
Alignment explanation
Indices: 14584110--14584157 Score: 87
Period size: 25 Copynumber: 1.9 Consensus size: 25
14584100 AGTTTGATCT
14584110 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
*
14584135 TAGACTGGGAATGAACTCTGTAT
1 TAGACTGGGAATGAACTCCGTAT
14584158 TTCTAAGTCA
Statistics
Matches: 22, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
25 22 1.00
ACGTcount: A:0.29, C:0.17, G:0.27, T:0.27
Consensus pattern (25 bp):
TAGACTGGGAATGAACTCCGTATGC
Found at i:14584980 original size:26 final size:26
Alignment explanation
Indices: 14584951--14585003 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14584941 CTGATCTTAT
14584951 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
14584977 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
14585003 C
1 C
14585004 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:14586759 original size:25 final size:25
Alignment explanation
Indices: 14586725--14586774 Score: 91
Period size: 25 Copynumber: 2.0 Consensus size: 25
14586715 AGTTCGATCT
14586725 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
*
14586750 TAGAGTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
14586775 CTAAGTCAAT
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
25 24 1.00
ACGTcount: A:0.28, C:0.18, G:0.30, T:0.24
Consensus pattern (25 bp):
TAGACTGGGAATGAACTCCGTATGC
Found at i:14587624 original size:26 final size:26
Alignment explanation
Indices: 14587573--14587625 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14587563 CCGGTTCAAT
* * *
14587573 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATCAACTCCATATG
14587599 CTTAGACTGGGAATCAACTCCATATG
1 CTTAGACTGGGAATCAACTCCATATG
14587625 C
1 C
14587626 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCATATG
Found at i:14588497 original size:26 final size:26
Alignment explanation
Indices: 14588468--14588518 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
14588458 AGTCCGATCT
14588468 TAGACTGGGAATGAACTCCGTATGCA
1 TAGACTGGGAATGAACTCCGTATGCA
*
14588494 TAGACTGGGAATGAACTTCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
14588519 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.18, G:0.27, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCA
Found at i:14588967 original size:894 final size:895
Alignment explanation
Indices: 14584385--14590941 Score: 8273
Period size: 894 Copynumber: 7.5 Consensus size: 895
14584375 GGTGGTAGGT
*
14584385 GGCACAACTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
14584450 CTTAAGCCTTCACGTGAAGTTT-ATGGCAAGACGACTGGTTTTCTATTTTTCATGATTTTTGAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
** *
14584514 CTTTTTAC-GTTTCAAGATTTTTTAAAATTTTTTCAGAAGGAT-TTTTGGCCCCAAACTTGGTAG
131 CTTTTTACGGTTT-GGGATTTTTTAAAATTTTTTCGGAAGG-TGTTTTGGCCCCAAACTTGGTAG
* *
14584577 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAATATTTAGCTAAAAACT-GAAAGTGTACAA
194 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG-AAGTGTACAA
*
14584641 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGCAGCAAAC
258 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * * *
14584706 CTATAAAATCTTAAATGCTTTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGC
323 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
14584771 CAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCG------CCC-GGCCCCCACGA
388 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGA
* * * * * *
14584829 TTGTCGGAACCCCAACGTCGCCGGTCAA-GTTCT-C--C--TG---C--GATGGTGCCTCGACGA
453 TCGCCGGAACCCCAATGTCGCCGAT-AAGGTTCTCCGACGATGCTCCGAGATGGTGCCCCGATGA
** * * * *
14584883 AGAAAAATACGGCACCAACACATGCCCGAGCGTAGCATGGGCTGTCGCAACCCTCGAT-CTGATC
517 AGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAG-TC
** * * *
14584947 TTATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCA
581 CGATCTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCA
** *
14585012 ACCCATGAAATGAGCGTGCGGGTGCTCAGCCAACCAGAGGGGTGGGATGCACAAGCTGGGGATCG
646 ACCCATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCG
* * ** * * *
14585077 GCCGGGT-CCCCTCAGCGTGCTATCGATCCCACTACCGTAACCCTCGGTCTGATCTGATCTTAGA
711 GCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGA
** * *
14585141 CTGGGAATGAACTCCGTATGCCTAAGCCAATTGGCGAAACGAGAGGGCGGGC-GGGCACTACGTC
776 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGGCACTACGTC
** *
14585205 AACCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTA
841 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
14585260 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* *
14585325 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* * **
14585390 CTTTTTACGGTTCGGGATTTTTTTAAATTTTTT-GAGAAGGACTTTTGGCCCCAAACTTGGTAGA
131 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCG-GAAGGTGTTTTGGCCCCAAACTTGGTAGA
* * * * *
14585454 CGTTATCATTTTAATTTTT-TTGGCATGCAAAAAAAAAATTCAGCTAAAAACTTGAAGTGTACAA
195 CGTGATCCTTGT-ATTTTTGTTGGCATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
** *
14585518 GATTTTGTGACCATTTGAAAAAAGTGTCCTAATTTCAGACGCTTTAATGGCTACTGGCAGCAAAC
258 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
14585583 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
323 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * * * * *
14585648 CAATATAAAGGCCAAGTACTAGTATCCATCGCACATCATGTGTGCACACCCCCCGGCCCCCCTGA
388 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGA
* * *
14585713 TCGCCGGAACCCCAATGTCTCCAATAAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGA
453 TCGCCGGAACCCCAATGTCGCCGATAAGGTTCTCCGACGATGCTCCGA-GATGGTGCCCCGATGA
* * * *
14585778 AGAAAAATGCGGCACCAACACTTGCCCGAGCCCAGCATGTCCTGCCGTAACCCTCGGTCC-G---
517 AGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCC
** *
14585839 G----T---CT--G-AT---CT---TA-G-AT----TGGGAATGAACTCCGTATGCGAAAATCAA
582 GATCTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
*
14585882 CCTATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGG
647 CCCATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGG
* * * * * * * *
14585947 CCCGGTCCCTCTCTACGTGTTGTCGATCCGGCGGCCGCAACCCTCGGTCCGATCTGATCTTAGAC
712 CCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGAC
*
14586012 TTGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGGGCGGGCGGGCGGGCGGGCAC
777 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGC--G-GGGCAC
* * *
14586077 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGCGGATCGATAGGGTGGTAGGTGGGTTTG
835 TACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* ** * * * *
14586138 GGCACATCTTCATATTTTTGTGTGCCAAAGCCATTTTTATGGCATATAAATTCATACAATGGTCT
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * *
14586203 CTTAAGCTTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTTTGTTTTTCATGATTTTTAAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* * *
14586268 CTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGGGAGGCGTTTTGGCCCCAAACTTGGTAGAC
131 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACTTGGTAGAC
* ** * *
14586333 GTGATACTTGTATTTTTGTTGGTGTGCACAAAAAATTTCAGCTAAAAAATCGAAGTGTACAAGAT
196 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * *
14586398 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACATTTTAATGGCTACTAGCAGCAAACCTG
261 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
14586463 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTTATGAGGGATAGCGGGCCAA
326 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
14586528 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCA
391 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCG
* * * * *
14586593 CCGGAACCCCAATGCCGTCGGTAAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGTAAAGA
456 CCGGAACCCCAATGTCGCCGATAAGGTTCTCCGACGATGCTCCGA-GATGGTGCCCCGATGAAGA
* * * * ** * *
14586658 AAAATGCGGAACCAGCACATGCCTGAGCCCAGCATGTGCT-ATGACAACACTCGGTCCAGTTCGA
520 AAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCG-CAACCCTCGGTCCAGTCCGA
* **
14586722 TCTTAGACTGGGAATGAACTCCGTATGC-TAGAGTGGGAATGAACTCCGTATGCCTAAGTCAATA
584 TCTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * * * *
14586786 AACGAAACGAGCGTACGGGCGCTCAACCGGCCAGAAGGGCGGGATGCACAAGCCGGGGATCGGTC
649 CATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCC
* * * * * **
14586851 GGGTCCCTCTCTGCGTGCTGTTGATCCTACTTCTGCAACCCTCGGTCTGGTCCAATCTTAGACTG
714 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTG
* * * * *
14586916 AGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-AGGCGCTACGCCGGC
779 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGGCACTACGTCGGC
14586980 C------A---GA---G--A------GA-C----GGGTGGTAGGTGGGTTTA
844 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
14587007 GGCACATCTTCATATTTCTACTTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * *
14587072 CTTAAGCCTTCACATGAAGTTT-ATGGCAAGACGACTGGTTTTCTATTTTTCATGATTTTCGGAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* **** *
14587136 CTTTTTGCGGTTCAAAATTTTTTAAAATTTTTTCAGAAGGAT-TTTTGGCCCCAAACTTGGTAGA
131 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGG-TGTTTTGGCCCCAAACTTGGTAGA
*
14587200 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAATATTCAGCTAAAAACT-GAAAGTGTACAAG
195 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG-AAGTGTACAAG
**
14587264 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTACAGCAAACC
259 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * *
14587329 TGTAAAATCTCAAATGCTTTTTAAGGTGGTGTGAGTTCTCGAGGTTTGATGAGCGATAAGGGGCC
324 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * **
14587394 AATATAAAGGACAAGTACCAGCACCCATCGCACATCATGT--G--TA--CCC-AACCCCCCCGAT
389 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGAT
* * * * *
14587452 TGTCGGAACCCCAATGTCGCCGGTCAA-GTTCT-C--CGA-----C--GATGGTGCCTCGGTGAA
454 CGCCGGAACCCCAATGTCGCCGAT-AAGGTTCTCCGACGATGCTCCGAGATGGTGCCCCGATGAA
* * * *
14587506 GAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCA
518 GAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCG
* * * *
14587571 ATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATCAACTCCATATGCCTAAGTCAAC
583 ATCTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * *
14587636 CCACGAAATGAGCATGTGGGTGCTCAGCCAGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGT
648 CCATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGC
* * * * * * *
14587701 CGGGT-CCCCTCAGCATGCTGTCGATCCTACTACCGTAACCCTTGGTCTGGTCTGATGTTAGACT
713 CGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACT
* * * * * * *
14587765 GGGAATGAACTCTGTATGCATAAGCCAATCGACGAAACGAACGGGCGGGC-CGGCACTACATCGA
778 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGGCACTACGTCGG
*
14587829 CCAGAGAGACGGGATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
843 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
14587882 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
14587947 CTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC-ACTCATTTTCTATTTTTCACGATTTTTGAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
** * ** *
14588011 CTTTTGGCGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGACTTTTGTCCCCAAACTTGGTAGAC
131 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACTTGGTAGAC
* * * * * * *
14588076 GTTATCTTTTTATTTTTTTTTGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
196 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
14588141 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACGCTTTAATGGCTACTGGCAGCAAACCTG
261 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
14588206 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
326 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
14588271 TATAAGGGCCAAGTACCAGTATCTATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCG
391 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCG
**
14588336 CCGGAACCCCAATGTCATCGATAAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGATGAAGA
456 CCGGAACCCCAATGTCGCCGATAAGGTTCTCCGACGATGCTCCGA-GATGGTGCCCCGATGAAGA
**
14588401 AAAATGTGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGAT
520 AAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGAT
* **
14588466 CTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTTCGTATGCCTAAGTCAACTT
585 CTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * * *
14588531 ATGAAACGAGCGTACGGGTGCTTAGTCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCC
650 ATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCG
* * * *
14588596 GGTCCCCCGCTGCGTGTTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTTG
715 GGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGG
* * * * *
14588661 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCAGGC-GGCCACTATGCCGGCC
780 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGGCACTACGTCGGCC
** * *
14588725 AGAGAGACGGGATGCGCAAGCCGCAGATCGATAGGGTGGTAGGTTGGTTTG
845 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * * *
14588776 GGCACAGCTTCATATTTCTGTATGCCAAAGCCATTTTTATGGCATGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
14588841 CTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTAAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
*
14588906 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGTGTTTTGG-CCCAAACTTGGTAGAC
131 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACTTGGTAGAC
* * **
14588970 GTGATCCTTTTATTTTTGTTAGTGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
196 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
14589035 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTG
261 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
14589100 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
326 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * * * *
14589165 TATAAGGGCCAAGAACCAGCACCCATCGCACATCCTATGCACACACCGCCTCGG-CCCCCGGATC
391 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCT-GGCCCCCCCGATC
* * * * *
14589229 GTCGGAACCCCAATGCCACCGATCAGGTTCTCC-A--A-----CG-G-TGGTGCCCCGGTGAAGA
455 GCCGGAACCCCAATGTCGCCGATAAGGTTCTCCGACGATGCTCCGAGATGGTGCCCCGATGAAGA
* * ** * *
14589284 AAAATATGGCACCAACACATGCCCGAGCCTAGCATGTTTTGCCGAAACCCTCGGT-CTGATCCGA
520 AAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAG-TCCGA
* * * *
14589348 TCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTAAACC
584 TCTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * ** * * * * *
14589413 CATGAAACGAGCGTACGGGTGCTCAGCCGGTTAAAGGGGCGGGATGCGCAAGCCGAGGATCGGTC
649 CATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCC
* * * ** * * * * * * *
14589478 GGGTCCCCGTATGCATGCTACCAATCCTGCTGCTGTAACCCTTGATCTGGTCTAAACTTAGACTG
714 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTG
14589543 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGTAGGCACTACGTC
779 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-GG--GGCACTACGTC
* *
14589608 GGCCAAAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTA
841 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
14589663 GGCACATCTTCATATTTCTGCATGCCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
14589728 CTTAGGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* ** *
14589793 CTTTTTGCCATTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
131 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACTTGGTAGAC
* *
14589858 GTGTTCCTTGTATTTTTGTTGGCATGCAC--AAAAATTCAGCTAAAAATTCGAAGTGTACAAGAT
196 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * * *
14589921 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACTAGTAGCAAACCTA
261 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
14589986 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
326 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
*
14590051 TATAAGGGCCAAGTACCAGCACCCATCGAACATCATGTGCGCACACCCCCTGGCCCCCCCGATCG
391 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCG
* * * * *
14590116 ACGGAACCCCAATGCCGCC-AGTCAGGTTCT-CGACGATGCTCCGACAATGGTGCCCCGACGAAG
456 CCGGAACCCCAATGTCGCCGA-TAAGGTTCTCCGACGATGCTCCGA-GATGGTGCCCCGATGAAG
*
14590179 AAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGA
519 AAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGA
*
14590244 TCTTATACTGGGAATGAA---C-T-T---T-G--T----ATG-----C----G--TAAGTCAACC
584 TCTTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * *
14590283 CACGAAATGAGCGTGCGGGTGCTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCAGCC
649 CATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCC
* * * * * * * *
14590348 GGGTCCCCCTCTGAGTGCTGCCAATCCTGCTGCCGCAAACCTCGATCCGGTTTGATCTTAGACTA
714 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTG
* *
14590413 GGAATGAACTCTGTATGCCTAAGGCAACCGACGAAACGAGCGGGCGGGCGGGTGGGCACTACGTC
779 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC--G-GGGCACTACGTC
*
14590478 GGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT--G----
841 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * * *
14590527 GGCACATCTTCATATTTCTACAAGCCAATTCCATTTTTATGGCTTGTAAATTCATACAACGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
** *
14590592 CTTAAGCCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTAGAA
66 CTTAAG-CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
** *
14590657 ACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTTGGAAGGTGTTTTGG-CCCAAACTTGGTAG
130 ACTTTTTACGGTTTGGGA-TTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACTTGGTAG
*
14590721 ATGTGATCCTTGTATTTTTGTT--CATGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
194 ACGTGATCCTTGTATTTTTGTTGGCA--TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * *
14590784 ATATTTTGTGACCATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAA
257 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
14590849 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGG
322 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
14590914 CCAATATAAGGGCCAAGAACCAGCACCC
387 CCAATATAAGGGCCAAGTACCAGCACCC
14590942 GATCAAGTTC
Statistics
Matches: 4962, Mismatches: 572, Indels: 304
0.85 0.10 0.05
Matches are distributed among these distances:
850 200 0.04
851 91 0.02
853 1 0.00
856 1 0.00
858 3 0.00
859 2 0.00
860 1 0.00
861 35 0.01
862 6 0.00
863 2 0.00
864 66 0.01
865 107 0.02
866 30 0.01
867 180 0.04
868 307 0.06
869 186 0.04
870 305 0.06
871 3 0.00
872 2 0.00
873 2 0.00
874 12 0.00
875 483 0.10
876 121 0.02
877 518 0.10
878 252 0.05
879 2 0.00
880 1 0.00
881 10 0.00
882 38 0.01
883 286 0.06
884 36 0.01
885 13 0.00
886 242 0.05
887 222 0.04
888 45 0.01
889 2 0.00
890 2 0.00
891 4 0.00
892 2 0.00
893 196 0.04
894 536 0.11
895 135 0.03
896 88 0.02
897 4 0.00
898 12 0.00
902 170 0.03
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (895 bp):
GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACTTGGTAGAC
GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCG
CCGGAACCCCAATGTCGCCGATAAGGTTCTCCGACGATGCTCCGAGATGGTGCCCCGATGAAGAA
AAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATC
TTAGACTGGGAATGAACTCCGTATGCATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
TGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCGG
GTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGG
AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGGCACTACGTCGGCCA
GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
Found at i:14589385 original size:26 final size:26
Alignment explanation
Indices: 14589349--14589401 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14589339 CTGATCCGAT
* *
14589349 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14589375 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14589401 C
1 C
14589402 CTAAGTAAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:14591078 original size:26 final size:26
Alignment explanation
Indices: 14591042--14591094 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14591032 CTGATCCGAT
* *
14591042 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
14591068 CTTAGATTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14591094 C
1 C
14591095 CTAAGTAAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:14593694 original size:26 final size:26
Alignment explanation
Indices: 14593665--14593717 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14593655 CTGGTCTGAT
14593665 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
*
14593691 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
14593717 C
1 C
14593718 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:14595462 original size:26 final size:26
Alignment explanation
Indices: 14595426--14595504 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
14595416 CTGGTCTGAT
*
14595426 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
*
14595452 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
14595478 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
14595504 C
1 C
14595505 CTAAGTCAAC
Statistics
Matches: 50, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.30
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCGTATG
Found at i:14597262 original size:26 final size:26
Alignment explanation
Indices: 14597233--14597283 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
14597223 AGTCCGATCC
* *
14597233 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTAGGAATGAACACCGTATGCT
*
14597259 TAGACTAGGAATGAGCACCGTATGC
1 TAGACTAGGAATGAACACCGTATGC
14597284 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.20, G:0.27, T:0.24
Consensus pattern (26 bp):
TAGACTAGGAATGAACACCGTATGCT
Found at i:14598101 original size:899 final size:895
Alignment explanation
Indices: 14590951--14599518 Score: 10567
Period size: 899 Copynumber: 9.6 Consensus size: 895
14590941 CGATCAAGTT
* ** * *
14590951 CTCCGACGGTGGTGCCCCGGTGAAGAAAAATATGGCACCAACACATGCCCGAGCCCAGCATGTGC
1 CTCCGA-GATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* ** * *
14591016 TGTCGCAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGATTGGGAA
65 TGCCGCAA-CCTCAGTCTG-T-CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * * * *
14591081 TAAACTCCGTATGCCTAAGTAAACCCATGAAACGAGCGTACGGGTGCTCAGCCGGCTAGAGGGGC
127 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * * * *** *
14591146 GGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCGTATGCATGCTACCAATCCTGCTATTGTAACC
192 GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAA-C
* * ** *
14591211 CTTGA-TCTGGTCTAAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
256 CTTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * * *
14591275 GCGGGCGGGCGGGTC-AGCACTACGTCAGCCAAAGAGACGGGATGCGCAAGCCATGGATCGATAG
321 GCGGGCGGGCGGG-CGGGCACTACGACGGCCAGAGAGACGGGATGCGCAAG-CGTGGATCGATAG
*
14591339 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCTATTTTTATGGCTTGTA
384 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* *
14591404 AATTCATACAATGGTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATT
449 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** *
14591469 TTTCACGATTTTTGAAACTTTTTGCCATTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
514 TTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * *
14591534 CCCCAAACTTGGTAGACGTGTTCCTTGTATTTTTGTTGGCATGCAC-AAAAAGTTTAGCTAAAAA
579 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
14591598 TTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGC
644 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * * *
14591663 TACTAGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGAT
709 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
*
14591728 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGAACATCATGTGCGCACA-CC
774 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * *
14591792 CCCTGGCCCCCCCGATCGACGGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGATG
839 CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* *
14591849 CTCCGACAATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGC
1 CTCCGA-GATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
*
14591914 TGCCGCAACC-C--TC-G--G-TC-----C---G---G---TCCG-AT-CTTATACTGGGAATGA
65 TGCCGCAACCTCAGTCTGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
** * * * *
14591956 ACTTTGTATGCGTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCTGGCCAGAGGGGCAGG
130 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * *
14592021 ATGTGCAAGCTGGGGATCAGCCGGGTCCCCCTCTGA-GTGCTGCCAATCCTGCTGCCGCAAACCT
195 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT-ACGTGCTGCCGATCCTGCTGCCGC-AACCT
* ** * *
14592085 TGA-TCCGGTTTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGGCAACCGACGAAACGAGC
258 TCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * *
14592149 GGGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGT
323 GGGCGGGCGGGCGGGCACTACGACGGCCAGAGAGACGGGATGCGCAAG-CGTGGATCGATAGGGT
* * *
14592214 GGTAGGT--G----GGCACATCTTCATATTTCTACAAGCCAATTCCATTTTTATGGCTTGTAAAT
387 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
14592273 TCATACAACGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
452 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * * *
14592338 CATAATTTTAGAAACTTTTTACGGTTCAGGATTTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
517 CATGATTTTTGAAACTTTTTGCGGTTCGGGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
* *
14592403 CC-AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGTTAAAAACT
581 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
14592467 CGAATTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
646 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * *
14592532 CTGACAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCGAGGTTTGATGA
711 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
*
14592597 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCC
776 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * * * *
14592662 TCGGCCGCCCCGAAT-GCCGGAACCCCAGTGCCGTCGGTTAGGTTCTCCGGCGATG
841 CCGGCCCCCCCG-ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* ** * * * * *
14592717 CTCCGGTGATGGTG-CCCGGTGAAGAAAAATGCGACACCAACACTTGCTCGAGCCCAGCATGTGC
1 CTCC-GAGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* **
14592781 TGTCATAACC-C--TC-G--G-TC-----C-------G-A-TCCG-AT-CTTAGACTGGGAATGA
65 TGCCGCAACCTCAGTCTGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * *
14592823 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGTGCTCAACCGGCCAAAGGGGTGGG
130 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * ***
14592888 ATGCGCAAGCCGAGGATC-GACTGGGTCCCCGTCTACGTGCTACCGATCCTGCTATTGCAACCCT
195 ATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAA-CCT
* * * * * *
14592952 TGA-TCCGGTCTGAACTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGC
258 TCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * * *
14593016 AGACGGGCGGGCAGGCACTAC-ACCAGCC-GAGAGACGGGATGCGCAAGCCGT-GATCGATAGGG
323 GGGCGGGCGGGCGGGCACTACGA-CGGCCAGAGAGACGGGATGCGCAAG-CGTGGATCGATAGGG
* *
14593078 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATTCCAATGCCATTTTTATGGCTTGTAGA
386 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* *
14593143 TTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTT
451 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * *
14593208 TCAAGATTTTTGAAATTTTTTGCAGTTCGGGATTTTTTTAAATATTTTT-GGAAGGAGTTTTGGC
516 TCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAAT-TTTTTCGGAAGGAGTTTTGGC
* *
14593272 CCCAAACTTGGTAGACGTGACCCTTGTATTTTTGTTGGCATGCACAAAAAAGTTCAGCTAAAAAC
580 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
*
14593337 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCT
645 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* *
14593402 ACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
710 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * * * *
14593467 AGAGATAGGTGGCCAATATAAGGACCAAGTGCCAGCACCCATCGCACATCATGTGCGCACA-CAC
775 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * *
14593531 CCTGG-CCCCCCGATCGTCGCAACCCCAATGCCGCCGGTTAGGTTCTCCGGCGA--
840 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
*
14593584 -T--G-G-T-G-G-CCCG-TGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT-CT
1 CTCCGAGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC-
* * *
14593639 TGCCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAA
65 TGCCGCAA-CCTCAGTCT-GTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
** * * * *
14593704 TGAACTTTGTATGCCTAAGTCAACCCACGAAACAAGCGCGCGGGCGCTCAGTCGGCCAGAAGGGC
127 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * *
14593769 GGGGTGCGCAAGCTGCGGATCGGTCGGGTCCCCCTCTACGTGCTGCCAATCCTGTTGCCGTAACC
192 GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACC
* * * * *
14593834 CTCGGTCCGGTTCGATCTTAGACTGGGAATGAAC-CCTGTATGCCTAAGCCAACCGATGAAACAA
257 TTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCC-GTATGCCTAAGCCAACCGACGAAACGA
* * * *
14593898 GCGGGCGGGTGGGTGGGCCGGCACTAC-ACCAGCCAGAGAGACGGGATGCGTAAGCCGTGGATCG
321 GCGGGC----GGGCGGGCGGGCACTACGA-CGGCCAGAGAGACGGGATGCGCAAG-CGTGGATCG
* * *
14593962 ATAGGGTGCTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTCTGGCC
380 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* * * *
14594027 TGTAAATTCATACATTGGTCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGAAGACTCGTTTTC
445 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * * *
14594092 TATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTCTTTAAAATTTTTTCGAAAGGAGTT
510 TATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTT
14594157 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
575 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* * *
14594222 AAAACTCAAAGTGTACTAGATTTTGTGACCATTTGTAAAAAGTGTCCCCATTTCAGACACTTTAA
640 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
14594287 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
705 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * *
14594352 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGAACCCATCACACATCATGTGCGCAC
770 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
** * * * *
14594417 A-CCCCCCGGCCCCCTTGATCGTCGGAATCCCAATGCCGCCGATCAGGTTCTGCGGTGATG
835 ACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* *
14594477 CTCCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGTGC
1 CTCCGA-GATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * **
14594542 TACTGCAACC-C--TC-G--G-TC-T--A----G--T---CT--G-AT-CTTAGACAAGGAATGA
65 TGCCGCAACCTCAGTCTGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * *** *
14594584 ACTCTGTATCCCTAAGTCAACCGACGAAACGAGTGTGCGGTCGCTCAATTGGCCAGAGGGGCGAG
130 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * *
14594649 ATGCGCAAGCCAGGGATCGGTCGGGTCCCGCTCTACGTGCTGCCAATCCTGCTGCCGCAACCCTC
195 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCTTC
* * * * * * * *
14594714 GGTCTGATCTGATCTTAGATTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAATGA----
260 AGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* ** * * * *
14594775 GCGGGCTGGCGGGCACTGTGCCGGCTAGAGAGACGGGATGCGCAACCCGTGGATCGATTGGGTGG
325 GCGGGCGGGCGGGCACTACGACGGCCAGAGAGACGGGATGCGCAA-GCGTGGATCGATAGGGTGG
14594840 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
389 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
14594905 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTA
454 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * *
14594970 GGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTCAAAATTTTTTTGGAAGGAGTTTTGGACCCA
519 TGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* * * * *
14595035 AACTTGGTAGACATGATGCTTGTATTTTTGTTGGCGTGCACAAAAAAATTCAACTAAAAACTTGA
584 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
*
14595100 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTG
649 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * *
14595165 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCAAGGTTTGATGGGGG
714 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
14595230 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGCACATCATGTGCACACA-CCCCCCG
779 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG
* * * * *
14595294 GCCCCCCCGATCGTCGAAACCCCAATACCGTCGATTAGGTTCT-C--CG--G
844 GCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * *
14595341 ---C--GATGGTGCCCCGGCAAAGAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATGTGCT
1 CTCCGAGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
*
14595401 GCCGCAACCCTTAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAAT
66 GCCGCAA-CCTCAGTCT-GTC-GATCTTAGACTGGGAATGAACTCCGTATGC------T-----T
*
14595466 GAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTG
117 --A----G-A--C------TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* *
14595531 CGGGCGCTCAGCCGGCCAGAGGGG-GGGAATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTTTGC
167 CGGGCGCTCAGCCGGCCAGAGGGGCGGG-ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTAC
* ** * * * * **
14595595 GTGCTACCGATCCTATTGTCGTAACCCTCAGTCCGGTTCGATCTTAGACTGGGAATGAACT-ATT
231 GTGCTGCCGATCCTGCTGCCGCAACCTTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * *
14595659 ATGCCTAAGCCAACCGACGAAACGTGCGGGCGTGCGGGCGGGGACTAC-ATCGGCCAGAGAGACG
296 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGA-CGGCCAGAGAGACG
* * ***
14595723 GGATGCGCACGATGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGT
360 GGATGCGCAAG-CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* * * ** * *
14595788 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGGTTCTTTAAAACTTCACATGAAGTTTA
424 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* *
14595853 ATGGCAAGACAACTCGTTTTTTTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
489 ATGGCAAGACGACTCG-TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTT
* * *
14595918 TAAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCATGTATTTTTTTTG
553 T-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * *
14595983 GCATGCAAAAAAAAATTCAGCTAAAAACTTGAAGTGTACAGGATTTTGTGATCATTTGAAAAAAG
617 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * *
14596048 TGTCCTCATTTTAGACACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTT
682 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTT
* *
14596113 AAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGC
746 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * ** * *
14596178 ACTCATCGCACATCATGCGCGCACAACCCCCCGGCCCCCCCGGTTATCGGAACCCTAATGCCGCT
811 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
14596243 GGTCAGGTTCTCCGGCGATG
876 GGTCAGGTTCTCCGGCGATG
* * * * * *
14596263 CTCTGGCGATGGTGCCCTGGCAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAGGTGC
1 CTC-CGAGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* *
14596328 TGTCACAACC-C--TC-G--G----T---CT--G---G---TCCG-AT-CTTAGACTGGGAATGA
65 TGCCGCAACCTCAGTCTGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * *
14596370 ACTCCGTATGCCTAAGTCAAACCACGAAATGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
130 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * *
14596435 ATGCGCAAGCCGGGGATAGGTCGGGTCCCCTTCTACGTGCTGCCAATCCTGCTGGCACAACCCTT
195 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAA-CCTT
* *
14596500 -GGTACGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG
259 CAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-
* * * * *
14596564 GACAGGTGGGCGGGTGGGCACTACGCCGGCCAGAGAGACGGGATGTGCAAACCGTGGATCGATAG
323 G---GGCGGGCGGGCGGGCACTACGACGGCCAGAGAGACGGGATGCGC-AAGCGTGGATCGATAG
* * *
14596629 GCTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTA
384 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
*
14596694 AATTAATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
449 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** * *
14596759 TTTCACGATTTTCAAAACTTTTTGCGGTTCAGGCTTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
514 TTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * * * *
14596824 CCCCAAACTTGGTAGACATGATCCTTCTATTTTT-TTGGTATGGACCAAAAAATTCAGCTAAAAA
579 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
14596888 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGC
644 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
14596953 TACTGGCAGCAAACCTGTAAAATGTCAAATGCTCTTTAAGGGCGTGTGAGTTCTCGAGGTTTGAT
709 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
14597018 GAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTGTGCAAACCC
774 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* ** * * * * * *
14597083 CCCCGACCGTCTCGATCGTCGAAAGCTCAATGCCGCTGGTCAGGTTCTCTGGCGATG
839 CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * * * *
14597140 CTCCGGTGATGGTGCCTCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCTAGCATGTGC
1 CTCC-GAGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * *
14597205 TACCGCAACCTTCAGTCTAGTCCGATCCTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAA
65 TGCCGCAACC-TCAGTCT-GT-CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * * *
14597270 TGAGCACCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAAAGGGGT
127 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * ** * ** *
14597335 GGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTTCGTGCTATCGATCTTGCTATCGTAACC
192 GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACC
* * *
14597400 TTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTACGCCAACCGACGAAACGAG
257 TTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * *
14597465 CGGGCGGGTGGGTGGGCACTACGACGACCAGAGAGACGGGATGCGCAAGCTTGGATCGATAGGGT
322 CGGGCGGGCGGGCGGGCACTACGACGGCCAGAGAGACGGGATGCGCAAGCGTGGATCGATAGGGT
*
14597530 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCACGCCAATGCCATTTTTATGGCTTGTAAAT
387 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
* *
14597595 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTCT
452 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* ** * * * *
14597660 CACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTTGGAAGGTGTTTTGGCCC
517 CATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * * * * *
14597725 CAAACTTAGTAGACATGATCCTTGTATTTTTTTTCGTATGCATAAAAAAATTCAGCTAAAAACTC
582 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
14597790 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCATACACTTTAATGGCTAC
647 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
14597855 TGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGCGGTGTGAGTTCTCGAGGTTTGATGAG
712 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * * * *
14597920 AGATAGGGGGCCAATATAAGAGCCAAGTACCATCACCCATCGCACATCATGCGCACACACCCCCC
777 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * *
14597985 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATA
842 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * * * * * *
14598039 CTCCGAAGATGGTGGCTCGACGAAGCAAAATGCAGCACCAGCACATGCTCAAGCCCAGCATGTGC
1 CTCCG-AGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * *
14598104 TACCGCAACCCTCGGTCTAGTCGGATCTTAGATTGGGAGTGAACTCCGTATGCTTAGACTGGGAA
65 TGCCGCAA-CCTCAGTCT-GTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * *
14598169 TGAACTCTGTATGCCTAAGTCAACGCATGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGA-GGGC
127 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * * * **
14598233 GGGATACGTAAGCCGAGGATCGGTCGGGTCCCCCTCCATGTGCTACCGATCCTGCGGCTACAACC
192 GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACC
* * * * *
14598298 TACGGTCCGGTACAATCTTAGAATGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-
257 TTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * *
14598362 ---GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGACGCGCAAGCCGTGGATCGATATGG
322 CGGGCGGGCGGGCGGGCACTACGACGGCCAGAGAGACGGGATGCGCAAG-CGTGGATCGATAGGG
* * *
14598424 TGGTAGGTGGGTTTAGGCACATTTTCAAATTTCTGCATGCCAATGCCATGTTTATGGCTTGTAAA
386 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* * *
14598489 GTCATACAATGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTT
451 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * *
14598554 TCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGAC
516 TCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
*
14598619 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAGAATTCAGCTAAAAACT
581 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * *
14598684 CGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCTATTTCAGACACTTTAATGGCTA
646 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* *
14598749 CTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGA
711 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
** *
14598814 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTGCCTATCGCACATCATGT--GCACATCCCC
776 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCC
* * *
14598877 CCCGGCACCCCCGATCATCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
840 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * ** *
14598933 CTCCAACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGTGCATGACCGAGCCCAGCATGTGC
1 CTCCGA-GATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* *
14598998 TGCCGCAACCCTCGGTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAA
65 TGCCGCAA-CCTCAGTCTG-T-CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * * *
14599063 TGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGTGTGCGGGCGCTCAACCAGTCAGAGGGGC
127 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * * * * * *
14599128 GGGATGCGCAAGCTGAGGATCGGTTGGGTCCCCCACTGCATGCTGTCGAACCTACTACCGCAACC
192 GGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACC
* ** *
14599193 CTC-GATTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
257 TTCAG-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
14599257 GCGGGCGGGCGGGCGGGCTCTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGG
321 GCGGGCGGGCGGGCGGGCACTACGACGGCCAGAGAGACGGGATGCGCAAG-CGTGGATCGATAGG
* * * *
14599322 GTGGTAGGTGGGTTTAGGTACTTCTTCACATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAA
385 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
* * *
14599387 ATTCATAAAATGGTCCCTTAAGCCTTCACGTGATGTTTCATGGCAAGATGACTCGTTTTCTATTT
450 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * **
14599452 TTCTTGATTTTTGAAACTTTTTGCAGTTCGGGATTTGCTAAAATTTTTTCGGAAGGAGTTTTGGC
515 TTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
14599517 CC
580 CC
14599519 AAGGGGGTGT
Statistics
Matches: 6675, Mismatches: 793, Indels: 403
0.85 0.10 0.05
Matches are distributed among these distances:
857 1 0.00
858 103 0.02
859 9 0.00
860 2 0.00
861 2 0.00
862 5 0.00
863 1 0.00
864 3 0.00
865 19 0.00
866 201 0.03
867 493 0.07
868 64 0.01
869 550 0.08
870 34 0.01
871 373 0.06
872 240 0.04
873 7 0.00
874 3 0.00
875 1 0.00
876 144 0.02
877 405 0.06
878 122 0.02
879 57 0.01
880 47 0.01
881 162 0.02
882 6 0.00
883 11 0.00
884 171 0.03
885 3 0.00
886 2 0.00
888 24 0.00
889 29 0.00
890 429 0.06
891 41 0.01
892 1 0.00
893 11 0.00
894 263 0.04
895 526 0.08
896 2 0.00
897 4 0.00
898 410 0.06
899 693 0.10
900 3 0.00
901 7 0.00
902 15 0.00
903 227 0.03
904 6 0.00
907 1 0.00
909 25 0.00
910 143 0.02
912 2 0.00
913 157 0.02
914 45 0.01
915 173 0.03
916 86 0.01
917 40 0.01
918 1 0.00
919 1 0.00
920 2 0.00
922 2 0.00
924 2 0.00
927 2 0.00
928 61 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
CTCCGAGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
GCCGCAACCTCAGTCTGTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
TGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCTTCA
GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
CGGGCGGGCGGGCACTACGACGGCCAGAGAGACGGGATGCGCAAGCGTGGATCGATAGGGTGGTA
GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
ATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGC
CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
Found at i:14598166 original size:26 final size:26
Alignment explanation
Indices: 14598130--14598182 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14598120 CTAGTCGGAT
* *
14598130 CTTAGATTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14598156 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14598182 C
1 C
14598183 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.17, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14599053 original size:26 final size:26
Alignment explanation
Indices: 14599024--14599076 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14599014 CTGATCCGAT
14599024 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14599050 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14599076 C
1 C
14599077 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14600638 original size:26 final size:26
Alignment explanation
Indices: 14600602--14600654 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14600592 CCGATTCGAT
14600602 CTTACACTGGGAATGAACTCCATATG
1 CTTACACTGGGAATGAACTCCATATG
* *
14600628 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCATATG
14600654 C
1 C
14600655 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCATATG
Found at i:14601529 original size:26 final size:26
Alignment explanation
Indices: 14601500--14601552 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14601490 CCGATCCGAT
*
14601500 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
14601526 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
14601552 C
1 C
14601553 CTAAGTGAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:14601686 original size:898 final size:899
Alignment explanation
Indices: 14599736--14608971 Score: 12158
Period size: 898 Copynumber: 10.2 Consensus size: 899
14599726 CTGATCTAAT
* * ** ** *
14599736 CTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTATGGGCACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * ** * * ** ** * * * *
14599801 CAGCCAGAAGCACGAGATGCGCAAGCCGAGGATCGGCCACGTACCCCTCTACGTGCTGGCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
** * * * * *
14599866 TATTACC-CAACCCTCGATCTAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTTAGGCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14599930 TCGACGAAACGA----GCGGGCGGGCGGGCACTATGCCAGCCATAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
14599991 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATCTTT-TCGCGTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCGTGCCAATGCCATTT
*
14600055 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGACAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * *
14600120 TCGTTTTCTATTTTTCATGATTTTTGAAAC-CTTTGCGGTT-TGAGATTTTTTTAAATTTTTTCG
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCG
* * * * * *
14600183 AAAGGCGTTTTGG-CCCGAACGTGGTAGACCTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
14600247 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTCCAA
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
14600312 ACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
14600377 CTCGAGGTTTGATGAGGGATAGGGGGCCAACAAAAGGGCCAAGTACCAGCACCCATCGTACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * **
14600442 TATGCGCACACCCCCCGGCCCCCCCGATCGTCAGAACCCCAATGCCGTCGGTAAGGTTCTCCAAC
714 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
*** * ** * * *
14600507 GATGCTCCAATGATTGTGCCCCGGGGAAGAAAAATGCGACACCAACACATGCCTGAGCCAAGCAT
779 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* * * * *
14600572 GTGCTGACGTAACCCTCGGTCCGATTCGATCTTACACTGGGAATGAACTCCATATG
844 GTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
*
14600628 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * ** * * *
14600693 CGACCAGAGGGGCGGGATGCGTAAGCTGGGGATCGATCGACTCCCCCTCTGCAAGCTACCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
* *
14600758 TGCTACCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCTTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** *
14600823 ACGACAAAACGAGCGGGCGGGTGGAAGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * *
14600888 TGTATCGATAGGGTGGTAGGTGGATTTTGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * *
14600953 TATCGCTTGTAAATTCATACAATGGTCCCTTAAGCGTACACGTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
*
14601018 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCAGGATTTTTTAAAATTTTTTCGGA
391 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
* * * * *
14601083 AGGAGTTTTGGCACCAAACTTGGTAGACGTGATCTTTGTATTTTTTTTGGCATGCATAAAACAAT
456 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
14601148 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
521 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
14601213 ACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTT-AGGGGGTGTGAGTTCT
586 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * **
14601277 CGAGGTTTGATGAGGGAGAGGGGGCCAATTTAAGGGCCAAGTAGTAGCACCCATCGCACATCATG
651 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * *
14601342 TGCGCACACCCCCTGGCCCCCCCGATCGTCGGATCCCCAATGCCGCTGGTCAGGTTCTCCGGCGA
716 TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
* * **
14601407 TGCTTCGGCGATGGTGCCTCGATTAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGT
781 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGT
*
14601472 GCTGGCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
846 GCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * **
14601526 CTTAGACTGGGAACGAACTCCGTATGCCTAAGTGAACCCACGGAACGAGAATGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * *
14601591 CGGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGACCGGCTCCCCCTTTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
** * * *
14601656 TGCTGTCACAACCCTCGGTCTGATCTGATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14601721 CCGACGAAACGAGCAGATGGGCGCGTGGGCGGGCGGGCACTATGCCGACTAGAGATATGGGATGC
196 CCGACGAAACGAGC-----GG-GC--GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * * * *
14601786 GCAAGTCGTGGATTGATAGGATGGTAGGTGGGTTTAGGCACATCTTCCTATTTCTGCATGCCAAT
253 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
* **
14601851 ACCATTTTTATGGCTTGTAAATTTGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
318 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* ** ** *
14601916 AGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTGTGGTTCGGGATTTTTTAAAAT
383 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTTACGGTTCAGGATTTTTTAAAAT
* *
14601981 TTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
447 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * ** * * *
14602046 TAAAACAATTCAGCTAAAAACTTAAAGTGTACAAGATTTTGGGACCACTTAAAAAAAGTGTCCCC
512 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* *
14602111 ATTTCAGATACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGT
577 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
14602176 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCG
642 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * ****
14602241 CACATCATGTGTGCATGCCACTCCCCGG-CCCCCCGATCACCGGAACCCCAATGCCATTAGTCAG
707 CACATCATGTGCGCA---CACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* * * * *
14602305 GTTCTCCGGGGATGCTCCGGTGATGGTGCCCCGATGAAGAAAAATGTGGCACCAACATATGCCCG
769 GTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCG
** * *
14602370 AG-CCAGCATGTGCTGCCGCAACCCTCATTCC-AGTCTGATCTTAGATTGGGAATGAACTCCGTA
834 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTA
14602433 TG
898 TG
* * * * * **
14602435 CTTAGACCGGGAGTGAACTCTGTATGACTAAGTCAAACCACGAAATAAG-GTTGCGGGTGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG-TGCGGGTGCTCAG
* * * * *
14602499 CCAGCTAGAGGGGCGAGATGCGCAAGCCGGGGATCGATTGGGTCCCCCTCTGCATGCTGTCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATC
* * * ** *
14602564 CTGCTGCAGTAACCCTCAATCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
14602629 ATCGATGAAACGAGCGGGTGGGCAGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAGC----GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
14602694 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTACATGCCAATGCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
14602759 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCCTCACGTGAAGTTTCATGGCAAGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
14602824 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCAAGATTTTTTAAAAATTTT
386 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTT
* ** **
14602889 TCGGAAGGAGTTTTAGCATCAATA-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTGCAA
451 TCGGAAGGAGTTTTGGCCCCAA-ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
14602953 AAAAATTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
14603018 TCAGACACTTTAATGGGTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14603083 AGTTCTGGAGGTTTGATGAGGGATAGGGGACCAATATAAGAGCCAAGTACCAGCACCCAACGCAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
14603148 ATCATTTGCGCACACCCCCCGGCCCCCCCGATCGACGAAACCCCAATGCCGCCGGTTAAGTTCTC
710 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * * * * *
14603213 TGACGATGCTCAGGTGATGATGCCCCGGCAAAGAAAAATGCGGCACCAACACGTGCCCAAGCCCA
775 CGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCA
* * * * * * *
14603278 GCATGTGGTGCTGCAACCCTCGGTCTGGTCCAATCTTAGATTGGGAATGAACTCCATATG
840 GCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14603338 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCATGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * ** *
14603403 CGGCCAGAAGGGCGGGATGCACAAGTCGGGGATCGACCGGGTCCCCCCTCTGTGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT-CCCCCTCTGCATGCTGCCGATC
** * *
14603468 CTGCTACCATAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14603533 ACCAACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* *
14603598 GTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCTGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
14603663 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * **
14603728 TAGTTTTCTATTTTTCATAACTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGG
390 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGG
* * * *
14603793 AAGGTGTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTTGTTGGCACGCACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
14603858 TTCAGCAAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14603923 CACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
14603988 TGGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * *
14604053 GTGCGCACACCCCCCCCGG-CCCCCCGACCGCCAGAACCCCATTACTGCCGGGCAGGTTCTCCAG
715 GTGCGCACA--CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * * *
14604117 CGATGCTCCGGCAATGGTGGCCCGATGAAGAAAAATGCGGCACCAACACATGCCTGAGCCTAGCA
778 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* * * * * * *
14604182 TGTTCTGTCGCAACCCTCGGTCTGGTCAGATCTTAGACTAGGAATGAACTCCATATG
843 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
14604239 CTTAGACTGGGAATGAGCTCCATATGCCTAAATCAACCCACTAAACGAACGTGCGGGTGGTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * *
14604304 CGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGTTGAGTGCCTCTCTGCATGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * * * * * ** *
14604369 TACTGCTGCAACCCTCAGTCAGGTATAATCTTAGACTACGAATGAACTCCATATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14604434 CCGACAAAATGAGCGGGCAGGCGGGGGGGCGGGCACTACGTCAGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGC--G--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
14604499 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
14604564 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** *
14604629 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCAGGATTTCTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTT
* *
14604694 CGAAAGGAGTTTTGGCCCCAAACTTGGTGGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
14604759 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCTATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14604824 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
14604889 TTCTCGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
14604954 CATGTGTGCACACCCCCCCG-ACCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCG
712 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** * ** * *
14605018 GTGATGCTTTGGCGATGGTGCCCCAACGAAGAAAAATATGGCACCAGCACATGCTCGAGCCCAGC
777 GCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGC
*
14605083 ATGTGCAGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGATTGATCTTTGTGAGCTTAGAC
842 ATGTGCTGCCGCAACCCTCGGT-C---C-GATC-----C-------GA------T---CTTAGAC
14605148 TGGGAATGAACTCCGTATG
881 TGGGAATGAACTCCGTATG
* * * * *
14605167 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * * *
14605232 CGGCCAGAGTGGTGAGATGCGCAAGCCGGGGATCGATCGAGTCCACCTCTACGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * * *
14605297 TACTATCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGCATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14605362 CCGACAAAACGAGCGGGTGGGCAGGCGGGCATTACGTCGGCCAGAGAGACGGGATGCGCAAGCCA
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * * *
14605427 TTGATCGATAGGGTGGTAGGTGGCTTTAGACACATCTTCATATTTCTGCATTCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
14605492 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * * * *
14605557 CGTTTTATATTTTTCACGATTTTTCAAACTTTTTATGGTTCGGGAGTTTTTAAAATTTTTTTGAA
391 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
* * * * * * *
14605622 AGGATTTTTTGTCCCAAACTTGGTACACATGATCCTTGTATTTTTTTTGGTATGCACAAAAAAAT
456 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
14605687 TCAGCTAAAAACACGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCTGAC
521 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
14605752 ACTTTAATGGCTACTGACAGCAAA-CTCGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
586 ACTTTAATGGCTACTGGCAGCAAACCT-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
** *
14605816 TTTAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
14605881 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGCACCCCAATGCCGCCGGTCAAGTTCTCCGGTG
715 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* *
14605946 ATGCTCCGGCGATGGTGCCCC-AGCGAAGAAAAATGCGGCACCAGCACCTGCCCGAGCCCAGCAT
780 ATGCTCCGGCGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCAT
* *
14606010 GTGCTGTCGCAACCCTCGGTCC-AGTCCGATCTTAGACTGGGAATGAAGTCCGTATG
844 GTGCTGCCGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14606066 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
** * * *
14606131 CGGCCAGAGGGATGGGATGCGCAAGTCGGGGATCGATCGGCTCCCCCTCTAG-GTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCT-GCATGCTGCCGATC
* * * *
14606195 CTACTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCCAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
14606260 ACCGACAAAACGAGCAGACGAGCAGGCGGGCACTACGTCGGCTAGAGAGACGGGATGCGCAAGCT
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * **
14606325 ATGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
14606390 TTATGGCTTGTAAATTCATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * * *
14606455 TCGTTTTCTATTTTTCACAAATTTT-AATACTTTTTATGGTTC-GAGATTTTTTTAAATTTTTTT
390 TCGTTTTCTATTTTTCACGATTTTTGAA-ACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTC
* * ** *
14606518 GAAAAGAGTTTTATCCCCAAACTTGGTAGACGTGACCCTTGTATTTTT-TTGGCATGCACAAAAA
453 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
14606582 AATTCAGCTATAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14606647 GACACTTTAATGGCAACTGCCAGCAAACCTGTAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
14606712 TCTTGAGGTTTGATGAGGGATAGGGGGACAATATAAGGGCCAAGTACCAGCACCCATCGTACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * * *
14606777 ATGTGCGCGCACCCCCCGACACCCCCGATCACCGGAACCCCAATGTCGCCTGTCAGGTTCTCCGA
713 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * * * *
14606842 CGATGGTCTGGCGATGGTGCCCCAATGAAGAAAAATGCGGTACCAGCACATGCCCGAGCCCAGCA
778 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCA
* * * * * * ** * *
14606907 TGTGTTGCTGCAACCCTCAGTCTGGTCCAATCTTTCACTGGGAATGAACTCCCTTTG
843 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
*
14606964 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * ** * ** *
14607029 CGGCCAGAGGGGCGGGATGCGTAGGCCGGGGATCGGCCGGGTCCCTCTCTGTGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
** * * ** *
14607094 TGCTATAGAAACCCTCAGTCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14607159 CCGACGAAACGA-------GG-GGGCGGGCACTACGCTGGCCAGAGCGACGGGATGCGCAAGTCA
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * **
14607216 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGTGATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
14607281 TATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * ** *
14607346 CCTTTTCTATATTTCACGATTTTCAAAACTTTTTGCGGTTC-GAGATTTTTTAAAATTTTTTCGG
391 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCGG
* ** * *
14607410 AAGGAGTTTTGGCCCCAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGATACGCACAAAACAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
14607475 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGGGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14607540 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAACCTCAAATGCTTTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
14607605 TTGAGGTTTGACGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * * *
14607670 GTGTGCACACCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCGTCGATCAAGTTCCCCAGCG
715 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * *
14607735 ATGCTCCGGTGATGGTGCACAGACGAAGAAAAATGCGGCACCAACACATGCCTGAGCCCAGCATG
780 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATG
* * * * *
14607800 TGGTGCCGCAACCCTCGTTCCGGTTCGATCTTAGACTGGGAATGAACTCGGTATG
845 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * ***
14607855 CTTAGACCGGGAATGAACTCGGTATGCCTAAGTCAACCCATGAAATGAGCGTGCCGACACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * *
14607920 CGGCCAGAGGGGCGGGATACGTAAGCCGGGGATCGGTCGGGTCCCACTCTGCATGCTGCCGGTCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
* * * *** *
14607985 TGCTGCCGTAACCCTCGATCCAATCTGACCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** *
14608050 TCGAC-AAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCTGGCCCTACAGACGGGATGCGCAA
196 CCGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
14608114 GCCGTGGATCGATAGGGTGGTAGGTGGCTTTAGGGACATCTTCATATTTCTACGTGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
**
14608179 TTTTTATGGCTTGTAAATTCATACAATGGTCGTTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
14608244 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT-TGAGATTTTTTAAAATTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTT
* * * *
14608308 TCGGAAGGTGTTTTAGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGC-TCGCACAA
451 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT-GCACAA
* * *
14608372 AAAAATTCACCTGAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCGTT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
14608437 TCAAACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * **
14608502 AGTTCTCAAGGTTTGGTGAGGGATAGGGGGCCAATATAAAAGCCAAGTACCAGCACCCATCGCAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
14608567 ATCATGTGCGCACACCCCCCGG-CCCCTCGATCGCCGGAACCCCAATGCCGCCGGTTAGGTTCTT
710 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * *
14608631 CGACGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTGGCACCAACACATGCTCGAGGCCA
775 CGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCA
* *
14608696 GCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
840 GCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14608756 CTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAGGAGCGTGTGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
* * * * * * *
14608821 CGGCCAGAGGGGCGGGTTGTGCAAGCTGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
* * ** * * * *
14608886 TGCTACCGGAACCCTTGGTCCT-GTCCAATCTTAGGCTGGGAATGAACTCCGTATACTTAAGTCA
131 TGCTACCGCAACCCTCGGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14608950 ACCCACGAAACGAGCGTGCGGG
195 ACCGACGAAACGAGCGGGCGGG
14608972 TGCTCAACCG
Statistics
Matches: 7314, Mismatches: 938, Indels: 178
0.87 0.11 0.02
Matches are distributed among these distances:
890 255 0.03
891 519 0.07
892 106 0.01
893 60 0.01
897 190 0.03
898 1002 0.14
899 628 0.09
900 555 0.08
901 544 0.07
902 674 0.09
903 145 0.02
904 845 0.12
905 187 0.03
906 179 0.02
907 202 0.03
908 87 0.01
909 232 0.03
910 90 0.01
911 8 0.00
915 1 0.00
919 3 0.00
920 2 0.00
921 1 0.00
923 2 0.00
924 482 0.07
925 117 0.02
926 1 0.00
928 197 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (899 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCGATCC
TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGT
GCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:14603341 original size:26 final size:26
Alignment explanation
Indices: 14603312--14603364 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14603302 CTGGTCCAAT
*
14603312 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14603338 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14603364 C
1 C
14603365 CTAAGTGAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14604251 original size:26 final size:26
Alignment explanation
Indices: 14604213--14604265 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14604203 CTGGTCAGAT
14604213 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
* *
14604239 CTTAGACTGGGAATGAGCTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
14604265 C
1 C
14604266 CTAAATCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14605169 original size:26 final size:26
Alignment explanation
Indices: 14605140--14605193 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
14605130 ATCTTTGTGA
*
14605140 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
14605166 GCTTAGACTAGGAATGAACTCCGTAT
1 GCTTAGACTAGGAATGAACTCCGTAT
14605192 GC
1 GC
14605194 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
GCTTAGACTAGGAATGAACTCCGTAT
Found at i:14606071 original size:26 final size:26
Alignment explanation
Indices: 14606032--14606092 Score: 90
Period size: 26 Copynumber: 2.4 Consensus size: 26
14606022 CCCTCGGTCC
14606032 AGTCCG-AT-CTTAGACTGGGAATGA
1 AGTCCGTATGCTTAGACTGGGAATGA
14606056 AGTCCGTATGCTTAGACTGGGAATGA
1 AGTCCGTATGCTTAGACTGGGAATGA
* *
14606082 ACTCCATATGC
1 AGTCCGTATGC
14606093 CTAAGTCAAC
Statistics
Matches: 33, Mismatches: 2, Indels: 2
0.89 0.05 0.05
Matches are distributed among these distances:
24 6 0.18
25 2 0.06
26 25 0.76
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
AGTCCGTATGCTTAGACTGGGAATGA
Found at i:14607858 original size:26 final size:26
Alignment explanation
Indices: 14607829--14607881 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14607819 CCGGTTCGAT
*
14607829 CTTAGACTGGGAATGAACTCGGTATG
1 CTTAGACCGGGAATGAACTCGGTATG
14607855 CTTAGACCGGGAATGAACTCGGTATG
1 CTTAGACCGGGAATGAACTCGGTATG
14607881 C
1 C
14607882 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.30, T:0.25
Consensus pattern (26 bp):
CTTAGACCGGGAATGAACTCGGTATG
Found at i:14608759 original size:26 final size:26
Alignment explanation
Indices: 14608730--14608782 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14608720 CCGGTCCGAT
*
14608730 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14608756 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
14608782 C
1 C
14608783 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:14609118 original size:157 final size:159
Alignment explanation
Indices: 14608756--14609122 Score: 450
Period size: 159 Copynumber: 2.3 Consensus size: 159
14608746 ACTCCGTATG
* * * * *
14608756 CTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAGGAGCGTGTGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * * ** *
14608821 CGGCCAGAGGGGCGGGTTGTGCAAGCTGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCC
66 CGGCCAAAGGGGCGAGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCAATCC
* * * *
14608886 TGCTACCGGAACCCTTGGTCCTGTCCAAT
131 TGCCACCGCAACCCTCGGTCCAGTCCAAT
* * * *
14608915 CTTAGGCTGGGAATGAACTCCGTATACTTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* *
14608980 CGGCCAAAGGGGTGAGATGTGCAAGCCGGTGATCGGTCGGGT-CCCC-CTACGTGCTACCAATCC
66 CGGCCAAAGGGGCGAGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCAATCC
* **
14609043 TGCCATCGCAACCCTCGGTCCAGTCTGAT
131 TGCCACCGCAACCCTCGGTCCAGTCCAAT
* * * **
14609072 CTTAGACTAGGAATGAACTCCGTATGCCTATGCCAACAGACGAAACGAGCG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
14609123 GGCAGGCACT
Statistics
Matches: 175, Mismatches: 33, Indels: 2
0.83 0.16 0.01
Matches are distributed among these distances:
157 79 0.45
158 4 0.02
159 92 0.53
ACGTcount: A:0.22, C:0.29, G:0.29, T:0.20
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
CGGCCAAAGGGGCGAGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCAATCC
TGCCACCGCAACCCTCGGTCCAGTCCAAT
Found at i:14610510 original size:719 final size:718
Alignment explanation
Indices: 14609127--14610516 Score: 2264
Period size: 719 Copynumber: 1.9 Consensus size: 718
14609117 CGAGCGGGCA
* * * * *
14609127 GGCACTACGTCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
1 GGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTT
* * *
14609192 AGGTACATCTTCAGATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
66 AGGCACATCTTCAGATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGCC
* * *
14609257 CCTTAAGCCTTCACGTGAAGTTTCATGGCGAGACGACTCGTGTTATATTTTTCACGATTTTTAAA
131 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATGTTATATTTTTCACAATTTTTAAA
* * * *
14609322 ACTTTTTACGGTTCGTGATTTTTTAAAATTTTTTTGGAGGGAGTATTGGCTCCAAACTTGGTAGA
196 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGAAAGGAGTATTGGCCCCAAACTTGGTAGA
* *
14609387 CATGATCCTTGTATTTTTTTTCACATGCAAAAAAAAATTCAGCTAAAAAATTGAAGTGTACAAGT
261 CATGATCCTTGTATTTTTTTTCACATGCAAAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGA
* *
14609452 TTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAGTGGCTACTGGCAGCAAACCT
326 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
14609517 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCATGAGGTTTGATGAGGGATAGGGGGCCA
391 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCATGAGGTTTGATGAGGGATAGGGGGCCA
14609582 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCGACCCCCTCGATC
456 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCGACCCCCTCGATC
* * * * * *
14609647 GTCGGAACCCCAATGCTGCCAGTTAGGTTCTCCGACGATGCTCCGACGATGGTGCCTCGATGAAG
521 GTCGGAAACCCAACGCCGCCAGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG
* *
14609712 AAAAATTCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGGAACCCTCGGTCCGGTCTGA
586 AAAAATTCGGCACCAACACATGCCCGAACCCAGCATGTGCTACCGGAACCCTCGGTCCGGTCTGA
14609777 TCTTAGACTGGGAATGAACTCTGTTTGCAAAAGCGAACCGATAAAATGAGCGAGCGGGCGGGCGA
651 TCTTAGACTGGGAATGAACTCTGTTTGCAAAAGCGAACCGATAAAATGAGCGAGCGGGCGGGCGA
14609842 GCG
716 GCG
14609845 GGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTT
1 GGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTT
* *
14609910 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTGAATTCATAAAATGGCC
66 AGGCACATCTTCAGATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGCC
* * *
14609975 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACAATTTTTGAA
131 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATGTTATATTTTTCACAATTTTTAAA
** * *
14610040 ACTTTTTGTGGTTCGGGATTTTTTAAAAATTTTTTTGAAAGGTGTTTTGGCCCCAAACTTGGTAG
196 ACTTTTTACGGTTCGGGATTTTTT-AAAATTTTTTTGAAAGGAGTATTGGCCCCAAACTTGGTAG
* ** *
14610105 ACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
260 ACATGATCCTTGTATTTTTTTTCACATGCAAAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAG
14610170 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
325 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
14610235 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCATGAGGTTTGATGAGGGATAGGGGGCC
390 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCATGAGGTTTGATGAGGGATAGGGGGCC
* *
14610300 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CTCCCTGGCTCCCC-CG
455 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGC-CCCCGAC-CCCCTCG
* * * *
14610363 ATCGTCGGAAACCCAACGCCGCCGGTCAGGTTCTCTGGCGATGCTCGGACGATGGTGCCCCGACG
518 ATCGTCGGAAACCCAACGCCGCCAGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACG
* * * *
14610428 AAGAAAAATGT-GGCACCAGCACATGCCCGAACCGAGCATGTGCTATCGTAACCCTCGGTCCGGT
583 AAGAAAAAT-TCGGCACCAACACATGCCCGAACCCAGCATGTGCTACCGGAACCCTCGGTCCGGT
*
14610492 CTGATCTTAGATTGGGAATGAACTC
647 CTGATCTTAGACTGGGAATGAACTC
14610517 CGTATGCCTA
Statistics
Matches: 617, Mismatches: 51, Indels: 7
0.91 0.08 0.01
Matches are distributed among these distances:
718 201 0.33
719 411 0.67
720 5 0.01
ACGTcount: A:0.26, C:0.22, G:0.24, T:0.27
Consensus pattern (718 bp):
GGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCAGATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGGCC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATGTTATATTTTTCACAATTTTTAAA
ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGAAAGGAGTATTGGCCCCAAACTTGGTAGA
CATGATCCTTGTATTTTTTTTCACATGCAAAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCATGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCGACCCCCTCGATC
GTCGGAAACCCAACGCCGCCAGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG
AAAAATTCGGCACCAACACATGCCCGAACCCAGCATGTGCTACCGGAACCCTCGGTCCGGTCTGA
TCTTAGACTGGGAATGAACTCTGTTTGCAAAAGCGAACCGATAAAATGAGCGAGCGGGCGGGCGA
GCG
Found at i:14610874 original size:26 final size:26
Alignment explanation
Indices: 14610824--14610876 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
14610814 CTGGTCCGAT
* **
14610824 CTTAGATTGGGAAAGAACTTTGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
*
14610850 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
14610876 C
1 C
14610877 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.15, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCGTATG
Found at i:14612242 original size:26 final size:26
Alignment explanation
Indices: 14612213--14612265 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14612203 CCGGTCCGAT
* *
14612213 CTTAGACTGGGAATGAGCTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14612239 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
14612265 C
1 C
14612266 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Done.