Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168062.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 35950
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Found at i:18 original size:13 final size:14
Alignment explanation
Indices: 1--36 Score: 56
Period size: 13 Copynumber: 2.6 Consensus size: 14
1 TATTTTTTTGTA-T
1 TATTTTTTTGTATT
*
14 TATTTTTTGGTATT
1 TATTTTTTTGTATT
28 TATTTTTTT
1 TATTTTTTT
37 TGTACTTCGT
Statistics
Matches: 20, Mismatches: 2, Indels: 1
0.87 0.09 0.04
Matches are distributed among these distances:
13 11 0.55
14 9 0.45
ACGTcount: A:0.14, C:0.00, G:0.08, T:0.78
Consensus pattern (14 bp):
TATTTTTTTGTATT
Found at i:288 original size:26 final size:26
Alignment explanation
Indices: 259--311 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
249 CCGATCCGAT
259 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
* *
285 CTTAGACTGGGAATGAACTTCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
311 C
1 C
312 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:2965 original size:26 final size:26
Alignment explanation
Indices: 2927--2979 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
2917 CTAGTCTGAT
*
2927 CTTACACTAGGAATGAACTCCGTATG
1 CTTACACTAGGAATGAACCCCGTATG
* *
2953 CTTAGACTGGGAATGAACCCCGTATG
1 CTTACACTAGGAATGAACCCCGTATG
2979 C
1 C
2980 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.25, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTACACTAGGAATGAACCCCGTATG
Found at i:5972 original size:895 final size:894
Alignment explanation
Indices: 92--15501 Score: 18695
Period size: 896 Copynumber: 17.3 Consensus size: 894
82 GATGTCAACA
* * * * *
92 CACATCATGTGCGCACACCCCCACCCCCTTCAATCGTCGGAACCCCCAATGCCACTAGTCGGGTT
1 CACATCATGTGCGCACACCCCC-CCCCC-CCAATCGCCGGAA-CCCCAATGCCGCTGGTCAGGTT
* * * *** * *
157 CTCCGGCGATGCTACGACGATGGTGCCTTAGGCG-AAAAAAAATGCGACACCAGCACATGCCTGA
63 CTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGA
** ** * * *
221 -CCCAATATGT-CTACCCGTAACCTTCGGTCCGATCCGATCTTACACTGGGAATGAACTCCGTAT
128 GCCCAGCATGTGC-ACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTAT
* * * *
284 GCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACAAGCATGCGGGCACTCAG
192 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * ** *
349 TCGGCCAGAGGGGCAGAATGCCCTAGCAGGGGATCGATAGGGTCCCCCTACGTGCTGCCGATCCT
257 CCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTACGTGCTGCCAATCCT
* * * * * * *
414 ACTACTGCAACCCTC-GATCTGATCCGATCTTAGATTAGGAATGAACTCCGTATGCCTAAGCCAA
322 GCTACCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* ** * * *
478 CCGATGAAACGAGCAAGCGGGCGGGCACTACGTCAGCCAGAAAGGCGGGATGCGCAAGCCTTGGA
386 CCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
**
543 TCGATAGGGTGGTAGGCAGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTAT
451 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTAT
* * *
608 GGCTTGTAAATTCATACAAAGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCAT
516 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
* ** * * *
673 TTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGGGATTTTTTAAAAATTTTTTTAGAAG
581 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAG
* * *
738 GATTTTTTGCCCCAAACTTAGTAGACGTGATCCTTGTATTTGTT-TTGGCATGCACAAAAAAATT
646 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT-TTGTTGGCATGCACAAAAAAATT
* * ** * *
802 CAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAACGT-CCCATTCCGGACA
710 CAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * * *
866 CTTTAATGGCTACTAGCAGCATACTTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTT
775 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
931 AAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCG
840 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
*
986 CACATCATGTACGCACACCCCCCTCCTGCCCCCCAATCGCCGGAACCCCAATGCCG-TCGGTCAG
1 CACATCATGTGCGCACA--CCCC-CC--CCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAG
* *
1050 GTTCT-C--CGA---T-----GATGGTGCCCCAGGCGAAAAAAAAATGCGGCACCAGCACATGGC
60 GTTCTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCC
* * * * * **
1104 TGAGCCTAGCATGTGCACCCACATCCCTTGGTCTGGTCCAATCTTACACTGGGAATGAACTCCGT
125 CGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGT
* * * * * ** *
1169 ATGCTTAGAAT-AGAAT-AATTCCATATGCCTAAGTCAACCTACGAAACGAGTATGGCGAGCGCT
190 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT-GCGGGCGCT
* * * ** * * *
1232 TAGCAGGCCAGAGGGGCAGGATGCACAAGCTGGGGATCGGTCGGGTCCCCTCTATGTGCTGTCGA
254 CAGCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCC-CTACGTGCTGCCAA
* ** * * **
1297 -CCTACTATTGCAACCCTCAGTTCAGTCCAATCTTAGACT-GGAATGAACTCCGTATGCCTAAGC
318 TCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * *
1360 CAACCAATGAAACGA-CGAGGC--GCGGGCATTATGTAGGCCAGAGAGGCGGGATGCACAAGCCA
383 CAACCGACGAAACGAGCG-GGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
1422 TGGATCGATAGTGTGGTAGGTGGGTTTAGGCAC-T-TT-ATATTTTTTCCATGCCAATGCCATTT
447 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
1484 TTATGGCTTGTAAATTCATACAAT-GTCCCTTAAGCCTTCATGGGGAAGTTTCATGGCAAGAACG
512 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT-GTGAAGTTTCATGGCAAG-ACG
* * * *
1548 ACTCGTTTTCTATTTTCCCCCCCCCCCCTGATTTTTGAAACTTTTTACGGTTCGAGATTGCTTAA
575 ACTCGTTTTCTATTTT--------TCAC-GATTTTTGAAACTTTTTACGGTTCGGGATT--TT-T
* * ** * *
1613 ATAAAA-ATTTTCAGAAGGAGTTTCAAGCCCC-AACATGCGTAGACATGATCC-TGTATTTTT-T
628 TTAAAATTTTTTCAGAAGGAGTTT-TGGCCCCAAACTTG-GTAGACGTGATCCTTGTATTTTTGT
*
1674 TGGCATGCACAAAAAAATTCAGCCTAAAAACTCGAAGTGGTACAGCGAATTTTGTAAACCATTTG
691 TGGCATGCACAAAAAAATTCAG-CTAAAAACTCGAAGT-GTACAG-G-ATTTTGT-GACCATTTG
* * *
1739 AAAAAAGTGTCCCCA-TTCAGACACTTTAATTGCGATTGGCAGCAAACCTGTAAAATCTCAAATG
751 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
1803 CTCTTTTAATGGGGTGTGAGGTTTGCTTGAGGTTCGAT--GGGATAGGGGGCCAATATAA-GGCC
816 CTC-TTTAAGGGGGTGTGA-G-TT-CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
1865 AAGTACCAGCACCCATCG
877 AAGTACCAGCACCCATCG
* * * * * *
1883 CCACATCATGGGCGCACACCCCCGGCCCCCCCATAT-GTTCGAAACCAACAATGGCTGTTCGGTC
1 -CACATCATGTGCGCACACCCCC--CCCCCCCA-ATCG-CCGGAACC-CCAAT-GCCGCT-GGTC
** *
1947 AGGTTCT-CG--GA-----C-G-GATGGTGCCCC-GG-G-AAAAAAAATGTAGCACCAACACATG
58 AGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACAT-
* * * * *
1999 GCCCAAGCTCAGCATGTGCACCCACATCCCTTGGTCCGGTCTGATCTTACACTGGGAATGAACTT
122 GCCCGAGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTC
* * * **
2064 CGTATGCTTAGACTGGGAATGAATTTCGTTATTCCTAAGTCAACCCACG-AACGAAGCAGT-TTG
187 CGTATGCTTAGACTGGGAATGAACTCCG-TATGCCTAAGTCAACCCACGAAACG-AGC-GTGCGG
* * *
2127 GCGCTTAGCCGGCCAGA-GGGCAGGATGCCCATAG-CTGGGATCAGA-CGGGTCCCCCTTACGTG
249 GCGCTCAGCCGGCCAGAGGGGCAGGATGCACA-AGCCGGGGATC-GACCGGGTCCCCC-TACGTG
* * * * ** * ** * *
2189 CTACCGATCTTGCTGCTACAACCATC-GATCCAATCTGATCTTAGAATGGGAATGAACTCTGTAT
311 CTGCCAATCCTGCTACCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
2253 ACCTAAGCCAACCGACGAAACGAGCGGGCGGGTGGGCACTACGTCGGCCAGACAGACGGGCTGCA
375 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCG
*
2318 CAAGCCGTGGATCGATCA-GGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTGCCATGCCAA
440 CAAGCCGTGGATCGAT-AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAA
** *
2382 TGGTATTTTTATAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
504 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
* *
2447 AAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA-TGTTCGGGATTTTTTTAAAA
569 AAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTT-AAA
* * * *
2511 ATTTTTTCAGAAGGAGTTTTAGCCCTAAACTTGGTAGATGTAATCCTTGTATTTTTGTTGGCATG
633 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
2576 CAC-AAAAAATTCAGCTAAAAACTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAAAGTGTCC
698 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCC
2640 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGG
763 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
2704 GTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCAT
828 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
*
2769 CA
893 CG
*
2771 CACATCATGTGCGCACACCCCCCGCCCCCCCAATCGCCAGAACCCCAATGCCGC-GGATCAGGTT
1 CACATCATGTGCGCACA-CCCCC-CCCCCCCAATCGCCGGAACCCCAATGCCGCTGG-TCAGGTT
* * * *
2835 CT-C--CGA--------CGATGGTGCACTGAGTG-AAAAAAAATGCGGCACCAGCACATGCCCGA
63 CTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGA
* * * ** *
2888 GCCCAGCATGTGCGCCCGCAACCCTTGGTCTAGTCTGATCTTACACTAGGAATGAACTCCGTATG
128 GCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATG
* *
2953 CTTAGACTGGGAATGAACCCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTTAGC
193 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * ** * *
3018 CGGCTAGAGGGGCAGGATGCGCAAGCTGGGGATCGGTCGGGTACCTCTGTGTGATGGCCAATCTT
258 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTACGTGCT-GCCAATCCT
* * *
3083 GCTTACCGCAACCCTCAGTCTGGTCTGAATCTTAAGACTGGTAATGAACT-CGCATTGCCTAAGC
322 GC-TACCGCAACCCTCAGTCCGGTCTG-ATCTT-AGACTGGGAATGAACTCCGTA-TGCCTAAGC
* * ** * *
3147 CAA-CAACGAAATGAGCAGAACGGGCAGGCCACTACGTCGGCC--AGAGGCGGGCATGCGCAACC
383 CAACCGACGAAACGAGC-GGGCGGGC-GGGCACTACGTCGGCCAGAGAGGCGGG-ATGCGCAAGC
* * * * * *
3209 CGTAGATCGGTA-GGTGGT-GATGGGTTTAGCCACATCTTCATATTTTTGCCA-GGCAATGCACA
445 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGC-CA
*
3271 -TTTTATGGC-TGTAAGATTCA-ACAGATGGTCCCTTAAGCCTTCACGTG-AGTTTCATGGGCAA
509 TTTTTATGGCTTGTAA-ATTCATACA-ATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT-GGCAA
* * * *
3332 GATGACTCGTTTTCTA-TTTTCATTGA--TTTGAAACTTTTTACTGTTTCGAGA-TTTTTTAAAA
571 GACGACTCGTTTTCTATTTTTCA-CGATTTTTGAAACTTTTTAC-GGTTCGGGATTTTTTTAAAA
* *
3393 TTTTTTCAGAAGGA--CTTGG-CCCAAAC-TGGTAGACGTGAATCCTTATATTTTTGTTGGCATG
634 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG-ATCCTTGTATTTTTGTTGGCATG
*
3454 CAAAAAAAAAATTTCAGCTAAAAACTC-ATAGTG-AC-GGA--TTGTGACCATTTGAAAAAAAGT
698 C-ACAAAAAAA-TTCAGCTAAAAACTCGA-AGTGTACAGGATTTTGTGACCATTTG-AAAAAAGT
* *
3514 GTGCCCATTTCAGACACCTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
759 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * *
3579 GGGGGTGTGAGTTTTCGAGGTTTAATGAGGCATTGGGGGCCAATATAAGGGCCAAGTACCAGCAC
824 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
3644 CCATCG
889 CCATCG
* *
3650 CACATCATGTGCGCAC-CCCCCGCCCCCCCAATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
1 CACATCATGTGCGCACACCCCC-CCCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCT
** * * *
3714 -C--CGA--------CGATGGTGCCATGGGCAAAAAAAAAATACGGCACCAGCACATGCCTGAGC
65 CCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAGC
* * *
3768 CCAGCATGTGCACCCACAACCCTCGGTACGGTCCGATCTTACACTGGGAATGAACTTCGTATGCT
130 CCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCT
* ** * * * * *
3833 TAGACTGGTAAAAAACTCCATATGCCTAAGTCAACCCACAAAAAGAACGTGCGGGCGCTCAGTCG
195 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * *
3898 GCCAGAGGGGCAGGATGCACAAGTCGGGGATCGACCGGGTGCCCCCTTGCGTGCTGCCAATCCTA
260 GCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCCC-TACGTGCTGCCAATCCTG
* * * * *
3963 CTGCTGCAGCCCTCAATCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACC
323 CTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * ** * *
4028 GATGAAACAAGCGGGCGGGCGGGCACTACGTCGGCC-GAGAGGCGGGATGCATAAGCCGTGAATT
388 GACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
*
4092 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGTCATTTTTATGG
453 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGG
* * *
4157 CTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAACTTTCATGGCAAGACGACTCGTTT
518 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * * *
4222 T-TCATTTTTCACGATTTTTGAAACTTTCTACGGCTCTGGATTTTTTTACAATTTTTTCATACGG
583 TCT-ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGG
* * *
4286 AGTTTTGGCCCTAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCT
647 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC-
* * *
4351 A-CAAAAAACTCGAAGTGTGCAGGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACAC
711 AGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
4415 TTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCG
776 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
4480 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCG
841 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* *
4534 CACATCATGTGCGCA-ATCCCCCCGCCCCCCAATCGTCGGAACCCCAATGCCGCTGGACAGGTTC
1 CACATCATGTGCGCACA-CCCCCC-CCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGTTC
** * * * * * * *
4598 TCCGGTGATACTCTGGTGATGGTACCCCGAGCGAAAAAAATATGTGGCACCAGCACATGCCCGAG
64 TCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAG
* * * *
4663 CCCAGCATGTGCACCCACAACCCTCTGTCTGGTCTGATCTTACATTGGGAATGAACTCCGTATGT
129 CCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGC
* * * * *
4728 TTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACAACCGTCCGGGCACTCAGCC
194 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* * * * * * *
4793 GGCCAGAGGGGTAGGATGCGCAAGCTGGGGATCAACCGGGTCCCCCCTGCGTGCTGTCGATCCTG
259 GGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCCCTACGTGCTGCCAATCCTG
** * * ** * *
4858 CTATTGTAACCCTCAATTTGGTCTGATCTTGGA-TCGGGAATGAACTTCGTATGCCTAAGCCAAC
323 CTACCGCAACCCTCAGTCCGGTCTGATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCAAC
* * * *
4922 CGACGAAACGAGCGGGCAGGCGGGCACTATGCTC-GCCAAAGAGGCGGGATGCGCAAGCCATGGA
387 CGACGAAACGAGCGGGCGGGCGGGCACTACG-TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
* *
4986 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTATAT
451 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTAT
*
5051 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACACGT
516 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG-
* ** * *
5116 TTTTTTATTTTTCACGATTTTCAAAACTTTTTACTGTTTGGGATTTTTTTAAAATTTTTTCAGAA
580 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAA
* *
5181 GG-GTTTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTTTTGGCATGCACAAAAAAAT
645 GGAG-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
5245 TCAGCTAAAAACTCGAAGTGTACAGGA-TTTGTGGCTATTTGAAAAAAGTGTCCCCATTTCAGAC
709 TCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
5309 ACTTTATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
774 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
5374 CGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCG
839 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
5430 TACATCATGTGTGCACACCCCCCACCCCCAATCACCAGAACCCCAATGCCGCTGGTCAGGTTCTC
1 CACATCATGTGCGCACACCCCCCCCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTC
** * * * *
5495 CGGTGATGCTCCGGCGATGGTGTCGCGGGC-ATAAAAAAATGCAGCACCAGCACATGCCCGAGCC
66 CGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * *
5559 CAGCATGTGCACCCACAACACTCGGTCCGATCTGATCTTACATTGGGAATGAACTCCATATGCAT
131 CAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTT
* * * * * *
5624 ACATTGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAACGAGCGTACGGGCGCTCAGCCTG
196 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * ** *
5689 CCAGAGGGGCAGGATGCATAAGCCGGGGATCGATCGGGTCCCCCCATGTGTGCTGCCAATCTTGC
261 CCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCCC-TACGTGCTGCCAATCCTGC
** **
5754 TACCATAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCAATATGCCTAAGCCAACCG
324 TACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * * *
5819 ACGAAATGAGCGGGTGGGCGGGCACTACGCCGGCCAGAGAAGCAGGATGCGCAAGCTGTGGATCG
389 ACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* * * ** *
5884 ATAGGGTAGTAGGTTGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGAAAATTTTATGGC
454 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGC
* *
5949 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAGACGACTCGTTTT
519 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* *
6014 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTTAGAAGGAG
584 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAG
* * * * *
6079 TTGTGGCCCCACACTTTGTAGACGTGATCCTTGTATTTTT-TTCGGCATGTACAAAAAAATTCAT
649 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAG
*
6143 CTAAAAACTCGAAGTGTACAGGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
713 CTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
6208 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTTCTCAAG
778 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
6273 GTTTGATGAGGGATATGGGGCCAATGTAAGGGCCAAGTACCAGCACCCATCG
843 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * ** * * * *
6325 CACATCAAGTGTGCAC-CCCCTGCCCCCTAATCACCGGAACCCCAATGTCGCCGGTCAGGTTCTC
1 CACATCATGTGCGCACACCCCCCCCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTC
* * * * *
6389 CAACAATGCTCCGGCGATGGTGCCCCAGGCGAAAAAAAAATACGGCACCAGCACATGCCCAAGCC
66 CGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAGCC
* *
6454 CAGCATGTGCA-CCGCAACCCTCGGT----TC-G---GT-C-C-------G-A-T-C-T-TGC--
131 CAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTT
* * *
6494 --ACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCTGG
196 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
** ** * * * *
6557 CCAGAACGATAGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCCTATGTGCTACCAATCCTGCT
261 CCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCCCTACGTGCTGCCAATCCTGCT
*** * ** * * * *
6622 GTTGCAACCCTCAGTCCAGTCCAATCTTAGGCTGGGAATGAACTTCGTAAGCCTAAGCAAACCGA
325 ACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * *
6687 CGAAACAAGCGGGCGGGCGAGCACTACGTTGGCCAGAG-GGACGGGATGTGCAAGCCGTGGATCG
390 CGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGG-CGGGATGCGCAAGCCGTGGATCG
* * * *
6751 ATAGAGTGGTAGGTGAGTTTAGGCATATCTTTATATTTCTGCCATGCCAATGCCATTTTTAT-GC
454 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGC
* * *
6815 TTGTAAATTCATAGAATGGTCCCTTAAGCCTTCATGTGAAGTTTCGTGGCAAGACGACTCATTTT
519 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * * *
6880 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGAGCTTTTTTTAAAATTTTTTTAGAAGGAG
584 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAG
* * *
6945 TTGTGGCCCCACACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
649 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
** * *
7010 TAAAAACTCGCGGTGTACAGGATTTTGAGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
714 TAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
7075 AATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGG
779 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
7140 TTTGATAAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCG
844 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
7191 CACATCATGGGCGCAC-CCCCTGCCCCCCCTAATCGTCGAAACCCCAATGCC-ATCGGTCAGGTT
1 CACATCATGTGCGCACACCCC--CCCCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAGGTT
* * **
7254 CT-C--C-A-------GCGATGGTACCCCAGGCGAAAACAAAAATGCGGCACCAGCACATGCCTA
63 CTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAA-AAAAATGCGGCACCAGCACATGCCCG
** * * *
7308 AGCCCAGCATGTGCACCCGTAACCCTCGGTCTGGTCTGATCTTGCACTGGAAATGAACTCCGTAT
127 AGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTAT
* *
7373 GCTTAGACTGGGAATGAACTTTC-TATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCA
192 GCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * ** * * * *
7437 GCCGGCTAGAAGGGCAGGATGCGTAAGTCGAGGATCGGCCGGGTCCCCCTCACGTGTTGCCAATC
256 GCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCT-ACGTGCTGCCAATC
* * * ** * *
7502 CTGCTACTGCAACCCTCGGTCTGGTCTGATCTTAGGTTGGGAATGAACTCCATATGCCTAAGCTA
320 CTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
7567 ACCGACGAAACAAGCGAGCGGGCGAGCACTACGCCGGCCAGAG-GCGCGGGATGTGCAAGCCGTG
385 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAG-GCGGGATGCGCAAGCCGTG
* *
7631 GATCGATAGGGTGGTAGGTGAGTTTAGACACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
449 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
* * * *
7696 ATGGCGTGCAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAGTC
514 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * *
7761 GTTTTCTATTTTTCACGATTTTGGAAACTTTTTACAGTTCAGGATTTTTTTAAAATTTTTTTAAA
579 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGA
* * *
7826 AGGAGTTTTGGCCCGACACTTGGTAGACGTGATCCTAGTATTTTTGTTGGCATGCACAAAAAAAT
644 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
7891 TCAGCTAAAAACTCGATGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
709 TCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
7956 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCT
774 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
8021 CAAGTTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTG
839 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
8077 CACATCATGTGTGCACACTCCCCCTCGCCCCCCAATCTCCGGAACCCTAATGCCGCTAGTTAGGT
1 CACATCATGTGCGCACA--CCCCC-C-CCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGT
* * * * * ** *
8142 TCTCTGGCGATGCTCTGGCGAAGGTGCCCCAGATGAAAAAAGAATGCGGCACCAGCACATGCCCG
62 TCTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCG
* * * *
8207 AGCCCAGCATGTGCAGCCAAAACCCTCAGTCCGGTCCGATCTTACACTGGGAATGAACAT-CGTA
127 AGCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAAC-TCCGTA
** * * * *
8271 TGCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAGCCCACGAAATGAACGTGCGGGCGCTCA
191 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * * * *
8336 GCCTGCCAGATGGGTAGGATGCATAAGTCGAGGATCGGCTGGGTCCCCCCTGCGTGTTGCCAATC
256 GCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCCCTACGTGCTGCCAATC
* * * * * * *
8401 TTGCTGCCACAACCATCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
320 CTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * * * * *
8466 ACCGACGAAACGAGCGAACGGGTGGGCATTACGCCAGCCAGAGAGGCGGGATGCACAAGCCATGG
385 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
* * *
8531 ATCGATAGGGTGGTAGGTGGGTTTAGGCACGTCTTCATATTTCTACTATGCCAATGCCATTTTTA
450 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA
*
8596 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCATGACGACTCG
515 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * * *
8661 TTTTCTATTTTTCAAGATTTTTGAAACTATTTACGGTTCGAGA-TGTTTTGAAATTTTTTCAGAA
580 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAA
* *
8725 GGAGTTTTGGCCCCACACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
645 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
*
8790 CAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCAAGAT
710 CAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGAC
* *
8854 ACTTTTATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
774 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
8919 TGAGGTTTGATGAGGGATAAGGGGCCAATATAA-GGCCAAGTACCATCACCCATCA
839 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
** * * * * *
8974 CACAAAATGAGAGCACACCCCCCGCCCCCCCAATC-CCAGAACCCCAATGGCG-TCGATCAGGTT
1 CACATCATGTGCGCACA-CCCCC-CCCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAGGTT
* * * * *
9037 CTCCGACGATGCTCCGACGATGGTGCCTCAGGCG-AAAAAAAATGTGGCACCAGCACATGCCCAA
63 CTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGA
* * * * *
9101 GACTAGCATGTGCACCCCCAACCCTCGGTCCGGTCTGATCATACATTGGGAATGAACTCC-TATG
128 GCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATG
* * * * * *
9165 CTTAGACTGCGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATGCAGGCGTTCAGT
193 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * ** * *
9230 CGACCAGAGGGGCAGGATGCGTAAGCCGGAGATCGGCCGGGTCCCCCTACCTCCTATCGATCCTA
258 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTACGTGCTGCCAATCCTG
** * * *
9295 CTGTCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTACGTATGCCTAAGCCAACC
323 CTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
9360 AAC-AAATCGAG-GGG-GTGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAAGCCATGGA
388 GACGAAA-CGAGCGGGCG-GGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
* *
9422 TCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTT-TTCCTATGCCAATGCCATTTTTA
451 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC-ATGCCAATGCCATTTTTA
* * *
9486 TGGCTTGTAAATTCATAGAAGGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCG
515 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * * *
9551 TTTTTTATTTTTCACGATTTTTAAAACTTTTTATGGCTT-TGGATTTTTTTAAAATTTTTTTAGA
580 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCGGGATTTTTTTAAAATTTTTTCAGA
* * * *
9615 AGGAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTTTATTTTTGTTGGTATGCATAAAAAAAT
644 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * *
9680 TCATCTAAAAACTCGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGCGTCCCCATTTCAGAC
709 TCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
9745 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCT
774 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
9810 TGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCG
839 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *
9866 AACATCAGGTGCGCACACCCCCCGCCCCCCCAATTGTCGGAACCCCAATGCCGCCGATCAGGTTC
1 CACATCATGTGCGCACA-CCCCC-CCCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGTTC
* * * * * *
9931 TCCGATGATGCTCCGGTGATGGTGCCCCGGGTG--AAAAAAATGTGGCACCAGCACATTCCCAAG
64 TCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAG
* ** * * *
9994 CCTAGCATGTGCACCCGTAACCCTCAGTCCGGTCCGATCTTACACTGGAAATGAACTCCGTATGC
129 CCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGC
* * * * * * *
10059 TTAGACTGGTAAAGAACTCTGTATGCCTAAGTTAACCCACGAAACGACCGTGTGGGCGCTCAGCT
194 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* * * * * *
10124 GGCCAGAGGGGCAGAATGCACAAGTCGGGGATCGACCGGGTCCCCCCTTGCATGCTGCAAATCTT
259 GGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCCC-TACGTGCTGCCAATCCT
** * * *
10189 GCTACCATAGCCCTC-GATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAGGGCAA
322 GCTACCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * **
10253 CCAATGAAACGAGCGGGCGGGTAGGCACTACGTCGGCCAGAGAGGCGAGG-TGCGCAAGCCGTGG
386 CCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG-GGATGCGCAAGCCGTGG
* * ** * *
10317 ATCGATAGGGTGGTAGGTGGCTTTAGACACATCTTCATATTT-TGGCTGTGCCAATTCCCTTTTT
450 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCCATGCCAATGCCATTTTT
* *
10381 ATGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCTTGGCAAGACGACTC
514 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * *
10446 GTTTTCTATTTTTTATGATTTTTGAAACTTTTTACGGTTCGAGATTTGTTTCAAATTTTTTCAGA
579 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGA
* * *
10511 AGGAGTTTTGGCCCTAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
644 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
10576 TCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
709 TCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
10641 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTTAGTTCT
774 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
10706 CGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
839 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* *
10762 CACGTCATGTGCGCACACCCCCCGCCCCCCAATCGTCGGAACCCCAATGCCG-TCGGTCAGGTTC
1 CACATCATGTGCGCACACCCCCC-CCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAGGTTC
* * *
10826 TCCGACGATGCTCCGGCGATGGTGCCCCGGGC-AAAAAAAAATGTGGCACCAGCACTTGCTCGAG
64 TCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAG
*
10890 CCCAGCATGTGCACCCACAACCCTCGGTCC-G---G----T---CT--GAATGAACTTCGTATGC
129 CCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGC
* *
10942 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGCGCGGGTGCTCAGCC
194 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* ** * * * *
11007 GGCCAGAGGGGCAAGATGCGTAAGCCGGGGATC-AGCGGGTCCCCCACTACATACTACCAATCCT
259 GGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCC-CTACGTGCTGCCAATCCT
* * * * * * *
11071 ACTACTGCAAACCTCATTTCGGTCTGATCTTAGACTGGGAATGAACTCTGTACGCCTAAGCCAAC
322 GCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * ** * * *
11136 CGATGAAACGAGCGGACGGGCAGGCACTATGTCGGCTGGAGAGGCGGGATGCACAAGCCTTGAAT
387 CGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* *
11201 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGTCATTTTTATG
452 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATG
*
11266 GCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
517 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * *
11331 TTCTATTTTTCATGATTTTTGAAACTTTTTACGGCTCTGGATTTTTTTAAAATTTTTTTACAAGG
582 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGG
* * * * *
11396 AGTTTTGGCTCCAAACTTAGTAGACGTGATCCTTTTATTTTTGTTGGTATGCATAAAAAAATTCA
647 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* * * *
11461 TCTAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGCAAAAAGTGTCCCCATTTCAGGCACT
712 GCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
11526 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-A
777 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * * *
11590 TGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACTAGCATCCATCT
842 -GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *
11644 CACATCATGTGCGCAAACCCCCCCGCCCCCCAATCGTC-AAAACCTAATGTCG-TCGGTCAGGTT
1 CACATCATGTGCGCACA-CCCCCC-CCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAGGTT
* * *
11707 CTCCGACAATGCTCCGGCGATGGTGCCCTGGGCG-AAAAAAAATGCGGCACCAGCACTTGCCCGA
63 CTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGA
* * * * *
11771 GCCCTGCATGTGCACCCATAACCCTCGGTCCAGTCTGATCTTACACTGGGAATGAACTTCGCATG
128 GCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATG
* * * * * * *
11836 CTTAGATTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATGTGGGTGCTCAAC
193 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * ** * *
11901 CGGCCAGAGGGGCAGGATGCACAAGCTGGGGATCGGTCGGGTCCCCCTGCATGCTGCTGATCTTA
258 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTACGTGCTGCCAATCCTG
* * * *
11966 CTACCGTAACCCTCAGTCTGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
323 CTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * *
12031 GACGAAACGAGCGGGTGGGCGAGCAATACGACGGCCAGAGGAGAGGCGAGATGCGCAAGCCGTGG
388 GACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCC--A-GAGAGGCGGGATGCGCAAGCCGTGG
* ** * *
12096 ATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCAT-TTTCTATCGTGCCAATGCCATTTTCA
450 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTA
* * *
12160 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGAAAGATGACTCA
515 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* *
12225 TTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAA
580 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAA
*
12290 GGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAACAT
645 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-AT
* * *
12355 TCTGCAAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAC
709 TCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
12420 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
774 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
12485 TGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCG
839 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* ** *
12541 CACATCATGTGCGCAACCCCCCCCACCCCCCAATCGGTGGAACCCCAATGCCG-TCGGTTAGGTT
1 CACATCATGTGCGC-ACACCCCCC-CCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAGGTT
* * * ** * *
12605 CTCCGGCGATGCTCCGACGATGGT-ACCCTTG-GAAAAAAAAATGTGGCACCAGCACATGCCCAA
63 CTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGA
* * * * * * *
12668 GCCCAGTATGTGCACCCGCAACCCTCTGTCTGGTCTGATCTTACACCGGGAATGAACGCTGTATT
128 GCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTA-T
* * * *
12733 G-TTAGACTGGGAATGAACTCCATATGTCTAAGTTAACCCACGAAACGATCGTGCGGGCGCTCAG
192 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * ** ** * *
12797 CCGACCAGAGGGGTAGGATGCGCAAGTGGGGGATCGGTCGGGTCCCCCACTACGTGCTGTCGATC
257 CCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT-CCCC-CTACGTGCTGCCAATC
* ** * * * * *
12862 CTGCTGCTACAACCCTCTA-TTCGGTCTAATCTTAGATTGGGAATGAACTCCTTATGCCTAAGCA
320 CTGCTACCGCAACCCTC-AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
12926 AATCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGCAA-CCGTG
384 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
* **** **
12990 GATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATTGTGCCAATGGAATTTTT
449 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
*
13055 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAATACGACTC
514 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * *
13120 ATTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTTTTAAATTATTGCAG
579 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTTAAAATTTTTTCAG
* * * *
13185 AATGACTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAAAA
643 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
13250 TTCAGCTAAAAACTCGAAGTGTACAAGATGTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
708 TTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
13315 CACTTTAATGGCTACGGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
773 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
13380 TTGTGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
838 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
*
13437 CACATCATGTGCGCA-ACCCCCCACCCCCCAATCGCC-GAACCCCAATGTCGCTGGTCAGGTTCT
1 CACATCATGTGCGCACACCCCCC-CCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCT
* * * * * * *
13500 CCGGCGATGCTCCGACGATGGTGCCTCGGACG-AAAAACAATGTGGTACCAGCACATGCCCGAGC
65 CCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAGC
** * * * * *
13564 CCAGCATGTGCACCCGTAACCCTCGGTCTGGTATGATCTTACACTGGGAATGAATTTCATATGCT
130 CCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCT
* * * * * *
13629 TAGATTGCGAATGAACTCCCTATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCGCTCAGCTG
195 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * * * * *
13694 GCCAGAGGGGCAGAATACGCAATCCGAGGATCGACCGGGTCCCCCCCTACGTGCTGCCAATCCTA
260 GCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGT--CCCCCTACGTGCTGCCAATCCTG
** * ** *
13759 CTACCAG-AACCCTTGGACCAATCTGATCTTAGACTGGGAGTGAACTCCGTATGCCTAAGCCAAC
323 CTACC-GCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
13823 CGACAAAACAAACGGGCGGGTGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGAT
387 CGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* * *
13888 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATACCATTTTTCTG
452 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATG
* *
13953 GCTTGTAAATTCATACAATGGTCCCATAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCCTT
517 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * **
14018 TTCAATTTTTCATGATTTTTAAAACTTTTTACGATTCAAGATTTTTTTAAAATTTTTTCAGAAGG
582 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGG
* *
14083 AGTTTTGGCCCTAAACTTGGTAAACGTGATCCTTGTAATTTTTGTTGGCATGCACAAAAAAATTC
647 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-ATTTTTGTTGGCATGCACAAAAAAATTC
*
14148 AGCAAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
711 AGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
14213 TTTAATGGCTACTGGCAGCAAACCTGTAAAATTTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCA
776 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* *
14278 AGGTTTGATGAGGGATAAGGGGCCAATATAAGTGCCAAGTACCAGCACCCATCG
841 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
14332 CACATCATGTGCACACACCCCCCCGCCCCCCAATCGCTGAAACCCCAATGTCG-TCGGTCAGGTT
1 CACATCATGTGCGCACA-CCCCCC-CCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAGGTT
** *
14396 CT-C--C-A-------GCGATGGTGCCCTAGAC-AAAAAAAAATGCGGCACCAGCACATGCCCGA
63 CTCCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGA
* * * * *
14449 GCCCAGCATGTGCACCCGCAACCCTCGGCCCCGTCTGATCTTACACTGGGAATGATCTTCGTATG
128 GCCCAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATG
* * *
14514 CTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAACAAGCGTGCGGGTGCTCAGC
193 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *** ***
14579 TGGCCAGAGGGGCAGGATGCCCATGTCGGGGAGCGACCAGCTCCGTGTTACGTGCTGTTGATCCT
258 CGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCC-CCCTACGTGCTGCCAATCCT
* ** * *
14644 ACTGTCGCAACCGTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
322 GCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
14709 CGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
387 CGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* *
14774 CGATAGGGTGGTAGGTGGGTTTAGGCACGTCTTCACATTTCTGCCATGCCAATGCCATTTTTATG
452 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATG
*
14839 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGTCTCGTT
517 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * *
14904 TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAAATTTTTTCAGAAGG
582 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGG
14969 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCA
647 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
15033 GCTAGAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCTCCATTTCAGACACT
712 GCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
15098 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTTAGTTCTCGA
777 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * * * *
15163 GGCTTGATGAGGGATAGAGGGCCAATATAAGGGCTAGGTACCAGCACCGATCG
842 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *
15216 CACATCTTGTGCGCACA-CCACCCCCCCCAATCACTGGAACCCCAATACCG-TCGGTTAGGTTCT
1 CACATCATGTGCGCACACCCCCCCCCCCCAATCGCCGGAACCCCAATGCCGCT-GGTCAGGTTCT
* ** *
15279 CCGACGAAGCTTTGGTGATGGTGCCCCGGGCGAAAAAAAAATAG-GGCACCAGCACATGCCCGAG
65 CCGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAAT-GCGGCACCAGCACATGCCCGAG
** * **
15343 CCCAATATGTGCA-CCAGCAACCCTCGGTCCGGT-TCGATCTTACACTAGGAATGAACTTTGTAT
129 CCCAGCATGTGCACCCA-CAACCCTCGGTCCGGTCT-GATCTTACACTGGGAATGAACTCCGTAT
* * * *
15406 GCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCCACGAAATGAGCGTGCGGGCACTCAG
192 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* *
15471 TCGGCCAGAGGGGCAGCATGCACAAGCCGGG
257 CCGGCCAGAGGGGCAGGATGCACAAGCCGGG
15502 TGTGACGAGC
Statistics
Matches: 12612, Mismatches: 1582, Indels: 645
0.85 0.11 0.04
Matches are distributed among these distances:
857 21 0.00
858 39 0.00
859 13 0.00
863 2 0.00
864 2 0.00
865 1 0.00
866 371 0.03
867 176 0.01
868 129 0.01
869 1 0.00
872 3 0.00
873 1 0.00
874 1 0.00
875 31 0.00
876 49 0.00
877 133 0.01
878 359 0.03
879 141 0.01
880 114 0.01
881 131 0.01
882 760 0.06
883 422 0.03
884 432 0.03
885 488 0.04
886 874 0.07
887 319 0.03
888 40 0.00
889 68 0.01
890 281 0.02
891 332 0.03
892 287 0.02
893 499 0.04
894 959 0.08
895 1323 0.10
896 1677 0.13
897 782 0.06
898 417 0.03
899 607 0.05
900 103 0.01
901 58 0.00
902 3 0.00
903 62 0.00
904 2 0.00
905 20 0.00
906 62 0.00
907 17 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (894 bp):
CACATCATGTGCGCACACCCCCCCCCCCCAATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTC
CGACGATGCTCCGGCGATGGTGCCCCGGGCGAAAAAAAAATGCGGCACCAGCACATGCCCGAGCC
CAGCATGTGCACCCACAACCCTCGGTCCGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTT
AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
CCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTACGTGCTGCCAATCCTGCTA
CCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
GAAACGAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGGCTT
GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTT
TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
AAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
Found at i:8283 original size:26 final size:26
Alignment explanation
Indices: 8247--8299 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
8237 CCGGTCCGAT
8247 CTTACACTGGGAATGAACATCGTATG
1 CTTACACTGGGAATGAACATCGTATG
* * *
8273 CTTAGACTGGGAATGAACTTTGTATG
1 CTTACACTGGGAATGAACATCGTATG
8299 C
1 C
8300 CTAAGCCAGC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTACACTGGGAATGAACATCGTATG
Found at i:10061 original size:26 final size:26
Alignment explanation
Indices: 10032--10084 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
10022 CCGGTCCGAT
10032 CTTACACTGG-AAATGAACTCCGTATG
1 CTTACACTGGTAAA-GAACTCCGTATG
* *
10058 CTTAGACTGGTAAAGAACTCTGTATG
1 CTTACACTGGTAAAGAACTCCGTATG
10084 C
1 C
10085 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 21 0.88
27 3 0.12
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTACACTGGTAAAGAACTCCGTATG
Found at i:14524 original size:26 final size:26
Alignment explanation
Indices: 14488--14538 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
14478 CCCGTCTGAT
* *
14488 CTTACACTGGGAATGATCTTCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
14514 CTTAGACTGGGAATGAACTCCGTAT
1 CTTACACTGGGAATGAACTCCGTAT
14539 ACCTAAGTCA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.25, C:0.20, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:15419 original size:26 final size:26
Alignment explanation
Indices: 15381--15433 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15371 CCGGTTCGAT
*
15381 CTTACACTAGGAATGAACTTTGTATG
1 CTTACACTAGGAATGAACTTCGTATG
* *
15407 CTTAGACTGGGAATGAACTTCGTATG
1 CTTACACTAGGAATGAACTTCGTATG
15433 C
1 C
15434 CTAAGCCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.23, T:0.32
Consensus pattern (26 bp):
CTTACACTAGGAATGAACTTCGTATG
Found at i:21939 original size:26 final size:26
Alignment explanation
Indices: 21910--21962 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21900 CTGGTCCAAT
* *
21910 CTTACACTGGGAATGAACTCTGTATG
1 CTTACACTAGGAATGAACTCCGTATG
*
21936 CTTAGACTAGGAATGAACTCCGTATG
1 CTTACACTAGGAATGAACTCCGTATG
21962 C
1 C
21963 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTACACTAGGAATGAACTCCGTATG
Found at i:23339 original size:899 final size:889
Alignment explanation
Indices: 21142--26402 Score: 4473
Period size: 888 Copynumber: 5.9 Consensus size: 889
21132 GGATCGACTG
* * * * * *
21142 GGTCCCCCCTTACATGCTACCGATCCTGCTGCCATAACCCTCAGTCTAGTTTGATCTTACACTGG
1 GGTCCCCCC-TGCATGCTATCGATCCTGCTACCATAACCCTCAGTCTGGTTTGATCTTAGACTAG
* *
21207 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGCGGGCGGGCACTACGTCGG
65 GAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGC--G-GGC-GGCGGGCACTACG-CGA
* * * * * *
21272 CCAGACAGGAAAGGATACGCAAGTCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTC
125 CCAGAGAGG-CAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * *
21337 ATATTTCTGTCGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTT
189 ATATTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
21402 CATGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG
254 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
* *** **
21467 TTCGAGATTTTGTAAAATTTTTTCAG-AGGCAG-TTTGGCCCCAAACTTGGTAGATGCGATCCCC
319 TTCGAGATTTTTTAAAATTTTTTCAGAAGG-AGTTTTGGCCCCAAACTTGGTAGACATGATCCTT
* * *
21530 GTATTTTTGTTGCCATGCACAAAAAATTCAGCTAAAAACTCTAAGTGTACAGGATTTTGTGACCA
383 GTATTTTT-TTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCA
* * *
21595 TTTGAAAAAAGTGTCCCCATTTCAGACACTTAAATGGCTACTAGCAGCAAACCTGTAAAATCTTA
447 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * *
21660 AATGCTCTTTAAGGGGGTGTGAGTTTTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCA
512 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* ** *
21725 AAGCACCAGCACCCATCGTGCATCATGTGCGTACACCCCCCCGCCCCCCCAATCGTCGGAACCCC
577 AAGTACCAGCACCCATCGAACATCATGTGCGCACACCCCCCCG--CCCCCAATCGTCGGAACCCC
* * * * *
21790 AATGTCGCCGGTCAGGTTCTCCGAAGATGCTCTGGCGATGGTGCCTCGAGCGAAAAAAATGCTGC
640 AATGCCGCCGGTCAGGTTCTCCGAAGATGCTCCGACGATGGTGCCCCGAGCAAAAAAAATGCTGC
* * * *
21855 ACTAGCACATGCCTGAGCTCAGCATGTGCACCCGCAACCCTTGATCTGGTCCAATCTTACACTGG
705 ACCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTTGATCTGGTCCAATCTTACACTGG
*
21920 GAATGAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
770 GAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * *
21985 CGTACGGGCGTTCAGCTGGCCAGAGGGGCAGGATGCACAAGCTGGGGATCACCCA
835 CGTACGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCACAAGCTAGGGATCACCCA
* * * **
22040 GGTCCCCCCTGCATGCTATCGATCCTACTACCATAACCCTCAGTCCGATCAGATCTTAGACTAGG
1 GGTCCCCCCTGCATGCTATCGATCCTGCTACCATAACCCTCAGTCTGGTTTGATCTTAGACTAGG
* * * * * **
22105 AATGAACTCCGTATGCCTAAGCTAATCGACGAAACGAGTGGACGGGGGGCACTACGCTAGTGAGA
66 AATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGGCGGGCACTACGCGA-CCAGA
* * *
22170 GAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTCGACACATCTTCATATTT
130 GAGGCAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
22235 TTGCCATGCCAAAGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
195 CTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
*
22300 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTC-AG
260 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGA-
* *
22364 GATTTTTTTAAAATTTTTTCTGAAGGTGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATT
324 GA-TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA-T
22429 TTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTG
387 TTTTTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTG
* *
22494 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAGCTATAAAATCTCAAATG
451 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* **
22559 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGAAAATATAAGGGCCAAGT
516 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * *
22624 ACTAGCACCCATCGCACATCATGTGCGCACACCCCTCTCGCCCCCTAATTGCCGGAACCCCAATG
581 ACCAGCACCCATCGAACATCATGTGCGCACACCCC-CCCGCCCCC-AATCGTCGGAACCCCAATG
* * * *
22689 CCGGCGGTCAGGTTCTCTGACGATGCTCCGATGATGGTGCCCCGAGCAAAAAAAAAATGC-GACA
644 CCGCCGGTCAGGTTCTCCGAAGATGCTCCGACGATGGTGCCCCGAGC--AAAAAAAATGCTG-CA
* * * *
22753 CCAGCACATGCCCGAGCCCAGCTTGTGCACCCACAA-CCTTCGGT-TCGGTCCGATCTTGCACTG
706 CCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTT-GATCT-GGTCCAATCTTACACTG
* *
22816 GGAATGAACTCCGTATGCTTAGACTGGGAATTAACTCCGTATGCCTAAGTCAACCCACGAAACGA
769 GGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* ***
22881 GCGTATGGGCGCTCAGCCGGCCAAAGGGGCAGGATGC-CAAAG-TCAGGGATCGGTCA
834 GCGTACGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCAC-AAGCT-AGGGATCACCCA
* * * *
22937 GGTCCTCCTCTGCGTGCTATCGATCCTGCTATCGTAACCCTC-GATCTGGTTTGATCTTAGACTA
1 GGTCC-CCCCTGCATGCTATCGATCCTGCTACCATAACCCTCAG-TCTGGTTTGATCTTAGACTA
* *
23001 CGAATGAACTCCGTATGCCTAAGCCGATCGACGAAACGAGCGGGCAGGCGGGCACTACGCCGACC
64 GGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGC-GGCGGGCACTACG-CGACC
** * *
23066 AGAGAGGCCTGATGCACAAGCCATGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATA
127 AGAGAGGCAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* *
23131 TTTCTGCCATACCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCGTAAGCCTTCAT
192 TTTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* * *
23196 TTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTC
257 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC
*
23261 GAGATTTTTTAAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTCGGTAGACATGATCCTTGTA
322 GAGATTTTTT-AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA
*
23326 TTTTTTCTGGCATGCACAAAAAAATTCAGCTAGAAACTCGAAGTGTACAGGATTTTGTGACCATT
386 TTTTTT-TGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATT
* *
23391 TGAAAAAAGTGTCCCCAATTCAGACACTTTGATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
449 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
*
23456 TGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
514 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* ** *
23521 GTACCAGCACCTATCGAACATCATCCGCGCACACCCCCCCCGCCCCCAATCATCGGAACCCCAAT
579 GTACCAGCACCCATCGAACATCATGTGCGCACA-CCCCCCCGCCCCCAATCGTCGGAACCCCAAT
* * * ** * * * * * *** *
23586 GGCACCAG-CACATGC-CCG-AG--CCT-AG-C-A-CGTGCACTC--GC---AACCCT-C-G-AT
643 GCCGCCGGTCAGGTTCTCCGAAGATGCTCCGACGATGGTGC-CCCGAGCAAAAAAAATGCTGCAC
* * **** * *
23634 C--CA-AT--CC-A----ATC-T-TACACTGGGAA----TGAACT--T-CATATGCTTAGACTGG
707 CAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTTGATCTGGTCCA-AT-CTTACACTGG
** * * * *** ** **** * ** * *
23680 GAATGAACTTAGTATGGCTAAGCCAACCCATGAAACGAGCG--TGCGGGCGCTCAGCCGGCCAGA
770 GAATGAACTCCGTAT-GCTTAGACTAGGAATG-AAC-TCCGTATGCCTAAG-TCAACCCACGAAA
* * * * * * ** ** * * * *** * * * *
23743 GGGGCATGAC--GCAC-AAGCTGG--GGATCGACTGGGTGC-CCCCCTACGTGCTGCTGATCCT
831 CGAGCGT-ACGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCACAAGCTA-G-G--GATCACCCA
* * * * * *** * * ** * *
23801 GCTACTACAACCCT-CA-GTCTGGTCTGGTCTTAGACTGGGAATGAA--CTCTGTAT-GCCTAAG
1 GGT-C--C-CCCCTGCATG-CT-ATC-GATCCT-G-CT-ACCAT-AACCCTCAGTCTGGTTTGAT
* * * * *** * ** * * * *
23861 C-CA-ATCGACGAAACGAGAGGGCG---GGC-GGGCACTACGTCGGCTAAA-GAG-GATGGATGC
55 CTTAGA-CTA-GGAATGA-ACTCCGTATGCCTAAGC-C-A-ATCGACGAAACGAGCG--GG-CG-
** * * * * * * *** * **
23918 GCAAGC-CGTTGA-TCGA-TAGGGTGGTAGG-TGAGTTCAA-CCACTTCTTC-ATA--TTTCTAC
110 GCGGGCAC--T-ACGCGACCAGAGAGGCAGGATGCG--CAAGCCA-TGGATCGATAGGGTGGTA-
** *** * * * * * * * * * *
23975 CAT--GCCAATGC-CATTTTTATGGCTTGTAAAT-TCAT-ACAATGGTCC---CTTAAGCCTTCA
168 GGTGGGTTTAGGCACATCTTCAT--ATT-T--CTGCCATGCCAAT-G-CCATTTTTATGGCTT--
* *** * * * * * ** ***** *
24032 CGTGAAGTT--T-C-ATGG--CAAGACGAC-TCGTTTCTATCTTTCATGATTTTTTATGA-T--T
224 -GT-AAATTCATACAATGGTCCCTTAAGCCTTCATGT-GAAGTTTCATG--GCAAGACGACTCGT
** * * ** *
24087 TTTGAAACTTTTT-ACG--GTTCCAGA--TTTT----T----------TTAAAATTTTTTCAGAA
284 TTT-CTA-TTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAA
* ** * *
24133 GGTGTTTTATCCCTAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAACAAATT
347 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTT-TTGGCATGCA-AAAAAAATT
* * * *
24198 CAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACAAATTTGAAAAAAGTGTCCCTATTTCAGAC
410 CAGCTAAAAACTCGAAGTGTACAGGATTTTGTGAC-CATTTGAAAAAAGTGTCCCCATTTCAGAC
*
24263 ACTTTAATAGCTACTGGCAGCAAACC-GATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
474 ACTTTAATGGCTACTGGCAGCAAACCTG-TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
24327 TCGAGATTTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
538 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGAACATCAT
** * **
24392 GTGCGCACA----CCC-CCATCAATCG-CTGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGTGA
603 GTGCGCACACCCCCCCGCCCCCAATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCCGAAGA
* * * *
24451 TGCTCCGACGATGGTGCACCGGGCAAAAAAAAATGCGGCA-CAGCACATGCTCGAGCCCAGCATG
667 TGCTCCGACGATGGTGCCCCGAGC-AAAAAAAATGCTGCACCAGCACATGCCCGAGCCCAGCATG
* * ** *
24515 TGCACCCACAACCCTCAGTTC-GGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTG
731 TGCACCCACAACCCT-TGATCTGGTCCAATCTTACACTGGGAATGAACTCCGTATGCTTAGACTA
* * * * *
24579 GGAATGCACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAG
795 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAAAG
* * *** **
24644 GGGCAGGATGCGCAAGC-CGTGGATTGGCTG
860 GGGCAGGATGCACAAGCTAG-GGATCACCCA
** * * * * ******* * * *
24674 GGTCCCCCCTGTGTGCTGTCGATCCTACTGCCACAACCCTCAGTCCAAACCAATCTTGGATTGGG
1 GGTCCCCCCTGCATGCTATCGATCCTGCTACCATAACCCTCAGTCTGGTTTGATCTTAGACTAGG
* * * *
24739 AATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCACTATGCCAGCC-G
66 AATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGC-GGCGGGCACTACGCGA-CCAG
* * *
24803 AAGAGGCAGAATGCGCAAGCCATGGATCGTTAGGGTGGTAGGAGGGTTTAGGCACATCTTCATAT
129 -AGAGGCAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*** *
24868 TTCTGTTGTGCCAATGCCATTTTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTCCATG
193 TTCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG
* * * *
24932 TGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGATACTTTTTACAGTTC-
258 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCG
* * * *
24996 AGGATTTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCACACTTGCTAGACGTGATCCTTGTA
323 A-GA-TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA
*
25061 TTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAAATCGAAGTGTACCA-GATTTTGTGACCAT
386 TTTTT-TTGGCATGC-AAAAAAAATTCAGCTAAAAACTCGAAGTGTA-CAGGATTTTGTGACCAT
** *
25125 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAACAGCTACTGGCAGCAAACCTATAAAATCTCAA
448 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
* * *
25190 ATGCTCTTTAAGGGGGTGTGAGTTCTGGAGGTTTGATGAGGGATAGGGTGCCAATATAAAGGCCA
513 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * * **
25255 AGTACCAGCACCCATCGCACATCATGTGCACACACCCCACCCCTGCGCCCGCAATCGCCCTAACC
578 AGTACCAGCACCCATCGAACATCATGTGCGCACA-CCC-CCCC-GC-CCC-CAATCGTCGGAACC
** * * *
25320 ATAATGCTGCCGATCAGG---T-------T-CTCCGACGATGGCGCCCCGAGCGAAAAAAAATG-
638 CCAATGCCGCCGGTCAGGTTCTCCGAAGATGCTCCGACGATGGTGCCCCGAGC-AAAAAAAATGC
* * * * *
25373 TGGCACCAGCACATGCCCGAGCCCAGCATGTGCACCCGCAACCCTCGGTCCGGTTCAATCTTACA
702 T-GCACCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTTGATCTGGTCCAATCTTACA
** * * * * *
25438 CTTTGAATGAACTCTGTATGCTTAGATTGGGAACGAACTCTGTATGCCTAAGTCAACCCACGAAA
766 CTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * * * **
25503 CGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGTAGGGTGCGCAAGCCAGGGATCGA-CTG
831 CGAGCGTACGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCACAAGCTAGGGATC-ACCCA
* * * * * ** ** * *
25562 GGTCCCCCCTACGTGCTTTCGATCCTGCTGCCACAACCCTCAGTCCAGTCCGATCTTAGATTGGG
1 GGTCCCCCCTGCATGCTATCGATCCTGCTACCATAACCCTCAGTCTGGTTTGATCTTAGACTAGG
* ** *
25627 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCACGCGGGCGGGCACTACGCCGGCCAG
66 AATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGC-GGCGGGCACTACG-CGACCAG
* * * *
25692 AAAGGCGGGGTGCGGAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
129 AGAGGCAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* **
25757 TCTACTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
194 TCTGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * * *
25822 GAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCACGATTTTCAAAACTTTTTATGGTTC-A
259 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGA
*
25886 GGATTTTTTTAAAAGTTTTTT----AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
324 -GA-TTTTTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA
* *
25947 TTTTTGTTAGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAGGATTTTGTGACCATT
386 TTTTT-TTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATT
* * *
26012 TGAAAAAGGTATCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
449 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* *
26077 TGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAA
514 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * *
26142 GCACCGGCACCCATC-ACACATCATGTGCGGACACCCCCCCGGCCCCCCAATCGTCGGAACCCCA
579 GTACCAGCACCCATCGA-ACATCATGTGCGCACACCCCCCC-G-CCCCCAATCGTCGGAACCCCA
* * * * * ** * **
26206 ATGCCGTCGGTTAGGTTCT-CTAGTGATGCTCTGGGGATGCTGCCCC-AGGCGAAAAAAAATGGG
641 ATGCCGCCGGTCAGGTTCTCCGA-AGATGCTCCGACGATGGTGCCCCGA-GC-AAAAAAAATGCT
* * * * *
26269 GCACCAGCACATGCCCGAGCCCAGCATGTGCTCCCGCAACCCTCGGT-TCGGTCCGATCTTACAC
703 GCACCAGCACATGCCCGAGCCCAGCATGTGCACCCACAACCCTTGATCT-GGTCCAATCTTACAC
* * *
26333 TGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCCTATGCC-AAGTCAACCCACGAAAC
767 TGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
26397 GAGCGT
832 GAGCGT
26403 GCGAGTGCTC
Statistics
Matches: 3487, Mismatches: 641, Indels: 475
0.76 0.14 0.10
Matches are distributed among these distances:
840 1 0.00
841 23 0.01
842 7 0.00
843 2 0.00
844 1 0.00
846 107 0.03
847 157 0.05
848 1 0.00
849 2 0.00
850 4 0.00
851 2 0.00
855 3 0.00
856 1 0.00
857 3 0.00
858 1 0.00
859 2 0.00
860 3 0.00
861 16 0.00
862 5 0.00
863 32 0.01
864 37 0.01
865 48 0.01
866 42 0.01
867 65 0.02
868 53 0.02
869 69 0.02
870 54 0.02
871 25 0.01
872 21 0.01
873 21 0.01
874 33 0.01
875 8 0.00
876 9 0.00
877 4 0.00
878 3 0.00
880 2 0.00
882 2 0.00
883 26 0.01
884 8 0.00
885 7 0.00
886 241 0.07
887 35 0.01
888 504 0.14
889 219 0.06
890 12 0.00
891 1 0.00
892 176 0.05
893 62 0.02
894 175 0.05
895 261 0.07
896 14 0.00
897 258 0.07
898 151 0.04
899 461 0.13
900 7 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (889 bp):
GGTCCCCCCTGCATGCTATCGATCCTGCTACCATAACCCTCAGTCTGGTTTGATCTTAGACTAGG
AATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGGCGGGCACTACGCGACCAGAG
AGGCAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
TGCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGA
TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTT
TTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAA
AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
CACCCATCGAACATCATGTGCGCACACCCCCCCGCCCCCAATCGTCGGAACCCCAATGCCGCCGG
TCAGGTTCTCCGAAGATGCTCCGACGATGGTGCCCCGAGCAAAAAAAATGCTGCACCAGCACATG
CCCGAGCCCAGCATGTGCACCCACAACCCTTGATCTGGTCCAATCTTACACTGGGAATGAACTCC
GTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGC
TCAGCCGGCCAAAGGGGCAGGATGCACAAGCTAGGGATCACCCA
Found at i:24580 original size:26 final size:26
Alignment explanation
Indices: 24544--24596 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
24534 TCGGTCTGAT
24544 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
* *
24570 CTTAGACTGGGAATGCACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
24596 C
1 C
24597 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:26362 original size:26 final size:26
Alignment explanation
Indices: 26326--26378 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
26316 TCGGTCCGAT
26326 CTTACACTGGGAATGAACTCCATATG
1 CTTACACTGGGAATGAACTCCATATG
* *
26352 CTTAGACTGGGAATGAACTCCCTATG
1 CTTACACTGGGAATGAACTCCATATG
26378 C
1 C
26379 CAAGTCAACC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCATATG
Found at i:27046 original size:30 final size:32
Alignment explanation
Indices: 27010--27079 Score: 83
Period size: 30 Copynumber: 2.3 Consensus size: 32
27000 CGAAATCAAT
* * *
27010 AAAATATTATTTTTTAAATATA-A-ATATTTA
1 AAAATATTATTATATAAATATATATATAATTA
*
27040 AAAATATCATTATATAAATATATATATAATTA
1 AAAATATTATTATATAAATATATATATAATTA
27072 AAAA-ATTA
1 AAAATATTA
27080 AAAAATTAAT
Statistics
Matches: 33, Mismatches: 5, Indels: 3
0.80 0.12 0.07
Matches are distributed among these distances:
30 19 0.58
31 4 0.12
32 10 0.30
ACGTcount: A:0.56, C:0.01, G:0.00, T:0.43
Consensus pattern (32 bp):
AAAATATTATTATATAAATATATATATAATTA
Found at i:27187 original size:11 final size:11
Alignment explanation
Indices: 27171--27195 Score: 50
Period size: 11 Copynumber: 2.3 Consensus size: 11
27161 CTTCATGCTA
27171 CCCGACCCGAC
1 CCCGACCCGAC
27182 CCCGACCCGAC
1 CCCGACCCGAC
27193 CCC
1 CCC
27196 CGATTTTCAA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 14 1.00
ACGTcount: A:0.16, C:0.68, G:0.16, T:0.00
Consensus pattern (11 bp):
CCCGACCCGAC
Found at i:33582 original size:26 final size:26
Alignment explanation
Indices: 33546--33598 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
33536 CTGGTCTGAT
33546 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
33572 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
33598 C
1 C
33599 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:34529 original size:877 final size:871
Alignment explanation
Indices: 32820--35946 Score: 4160
Period size: 877 Copynumber: 3.6 Consensus size: 871
32810 CGTGCTATCG
* * *
32820 ATCCTACTACCGTAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
1 ATCCTACTACTGCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
32885 CCAACCGACGAAACGAGCGGGCGGGCGGGCACTACGCGGCCAGAGAGGCGGGATGCGCAAGCCGT
66 CCAACCGACGAAACGAGCGGGCGGGCAGGCACTAC-CAGCCAGAGAGGCAGGATGCGCAAGCCGT
32950 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
130 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
33015 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
195 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
33080 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCA-
260 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAG
* *
33144 AAAGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
325 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
*
33208 TTTAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
390 TTCAGCTAAAAACTCGAAGTGTACAGGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
33273 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
454 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
33338 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
519 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
* * **
33403 GTGCGCACA-CCCCCGCCCCCCCAATCGTGGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
584 GTGCGCACACCCCCCG-CCCCCCAATCGTCG-AACCCCAATGCCGCCGGTCAGGTTCTCCGGTGA
* *
33467 TGGTGCCC-AGCAAAAAAAAATGTGGCACCAGCACATGCGAGCCCAGCATGTGCACCCGCAACCC
647 TGGTGCCCGAGCGAAAAAAAATGCGGCACCAGCACATGCGAGCCCAGCATGTGCA--CGCAACCC
*
33531 TCGGTCTGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
710 TCGGTCTGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTAGG-ATGAACTCCGTA
* * *
33596 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAA
774 TGCCTAAGTCAACCCACGAAACGAGCGT--GGGCGCTCAGCCGACCAGAAGGGCAGGATGTGCAA
* *
33661 GTCGGGGATCGGTCGGGTCCCCCCTACGTGCTGCTG
837 GTCGGGGATCGGCCGGGTCCCCCCTACGTGCTGC-A
* * *
33697 ATCCTACTACTGCAACCCTTAGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAG
1 ATCCTACTACTGCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
33762 CCAATCGACGAAACGAGAGGGCGGGCAGGCACTACGTTAGCCAGAGAGGTAGGATGCGCAAGTCG
66 CCAACCGACGAAACGAGCGGGCGGGCAGGCACTAC--CAGCCAGAGAGGCAGGATGCGCAAGCCG
* * * * *
33827 TTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATTTTTGCCATGCCAATACCAATT
129 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
33892 TTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
194 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
33957 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCA
259 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCA
** * * * *
34022 GAAGGAGTTTTGGCAACAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGTATGTACAAAAAC
324 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
*
34087 ATTCAGCTAAAAACTTGAAGTGTACAGG-TTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGA
389 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
34150 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTC
454 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * **
34215 TCAAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACTATTACCCATCACACATCAT
519 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
*
34280 GTGCGCACACCCCCCGCCCCCCAATCGTCGAACCCCAATGCCACCGGTCAGGTTCTCCGGTGATG
584 GTGCGCACACCCCCCGCCCCCCAATCGTCGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATG
* * *
34345 GTGCCACGAGTGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCACTGGTAACC
649 GTGCC-CGAGCGAAAAAAAATGCGGCACCAGCACATG--CGAGCCCAGCATGTGCAC--GCAACC
**
34410 CTCGGTCCAGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTAGGATTGAACTCCGT
709 CTCGGTCTGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTAGGA-TGAACTCCGT
*
34475 ATGCCTAAGTCAACCCACGAAACGAGCGT-GGCGCTCAGCCGACCAGATGGGCAGGATGTGCAAG
773 ATGCCTAAGTCAACCCACGAAACGAGCGTGGGCGCTCAGCCGACCAGAAGGGCAGGATGTGCAAG
* * * *
34539 CCAGGGATTGGCCGGATCCCCCCTACGTGCTGCCA
838 TCGGGGATCGGCCGGGTCCCCCCTACGTGCTG-CA
* * * * **
34574 ATCCTGCTA-TCGCAACCCTCAGT-CGGTCTAATCTTATACTATGAATGAACTCCGTATGCCTAA
1 ATCCTACTACT-GCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
34637 GCCAACTGATGAAACGAGCGGGTGGGCA--CTAC-ACCAGCCAGAGAGGCGGGATGCGCAAGCCG
65 GCCAACCGACGAAACGAGCGGGCGGGCAGGC-ACTACCAGCCAGAGAGGCAGGATGCGCAAGCCG
* *
34699 TGGATCGATAGGGTGGTAGGTGGGTTTAGGGACATCTTCATATTTCTGCCATACCAATGCCATTT
129 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
34764 TTGTGGCTTGTAGATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAAC
194 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* ** *
34829 TCCTTTTCTATTTTTCACGATTTTTGAAACTTTTTATAGTTCG-GATTTTTTAAAAATTTTTTCA
259 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCA
* * *
34893 GAAGGAGTTTTTGGCCCCAAACTAGGTAGACATGATCCTTGTA-CTTTTTTGGCATGCACAAAAA
324 GAAGGAG-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
34957 AATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
388 AATTCAGCTAAAAACTCGAAGTGTACAGGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
35022 GACACTTTAATGGCTACTGGCAGCAAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGGTGTGA
452 GACACTTTAATGGCTACTGGCAGC-AAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGA
*
35087 GTTCTTTGAGGTTT-ATGAGGGAATAAGGGGGCCAATAT-AGGGCCAAAGGTACCAGCACCCAT-
515 GTTC-TCGAGGTTTGATGAGGG-AT-AGGGGGCCAATATAAGGGCC-AA-GTACCAGCACCCATC
* * * * * *
35149 ACAC-TCATGTGCGCACGCCCCCCACCCCCCCATCCGTCCGGAACTCCAATGCTGCCAAGTCAGC
575 ACACATCATGTGCGCACACCCCCCGCCCCCCAAT-CGT-C-GAACCCCAATGCCGCC-GGTCAG-
* * *
35213 GTTCTCGGTGATGCTACACGATGGTGCCCGGGCGAAAATAAATGCGGCA-CAGCACATGGTCGAG
635 GTTCTC--CG--G-T----GATGGTGCCCGAGCGAAAAAAAATGCGGCACCAGCACAT-G-CGAG
* * * * * *
35277 GCCAG-ATGTGCACCCAA-CCTTGATCTGGTCTGATC-TACACTAAGGAATGAACTTCGTATGCT
689 CCCAGCATGTGCACGCAACCCTCGGTCTGGTCTGATCTTACACT-GGGAATGAACTCCGTATGCT
*
35339 TAGACTAGGATGAACTCCGTATGCCTTAAAGTCAA-CCACGAAA-GAGCGTGCGGGCGATCAGCC
753 TAGACTAGGATGAACTCCGTATGCC-T-AAGTCAACCCACGAAACGAGCGT--GGGCGCTCAGCC
* * * * *
35402 -AGCCA-AAGGGTTAGGATGTGC-AGTCGGGGATCGGCCGCGT-CCCCTTCCATGCTGCA
814 GA-CCAGAAGGG-CAGGATGTGCAAGTCGGGGATCGGCCGGGTCCCCCCTACGTGCTGCA
* *** * * * * *
35458 AT-CTACTGCCATAACCTTC-GTCTGATCCGATCTTAGACTGGGAATGAACCCCGTATACCTAAG
1 ATCCTACTACTGCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
35521 CCAACCGACGAAACTAGCGGACGGGCGGGCACTA-CATCC---G-GTCAGAGA-G-GC-A-----
66 CCAACCGACGAAACGAGCGGGCGGGCAGGCACTACCAGCCAGAGAGGCAG-GATGCGCAAGCCGT
*
35573 --A--GATAGGGTGGTAGGGTGGG-TTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTT
130 GGATCGATAGGGTGGTA-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
35633 TTATGGCTTGTAAATTCATTCAATGGTCCCTTAAGCCTTCATGTGAACTTTCATGGCAAGACGAC
194 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
35698 TCGTTTTCTATTTTTCATGATTTTTTGAAACTTTTTAAGGTTTGAGATTTTTTTAAAAATTTTTT
259 TCGTTTTCTATTTTTCACGA-TTTTTGAAACTTTTTACGGTTCGAGATTTTTTT-AAAATTTTTT
*
35763 CAG-AGGAGTTTTGGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAAA
322 CAGAAGGAGTTTTGG-CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* *
35827 AACATTCAGCTAAAAAACTCAAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGT-CCCATT
386 AAAATTCAGCT-AAAAACTCGAAGTGTACAGGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
35891 TCAGACAC-TTAATGGCTACTGGCCAGCAAACCTTTAAAATCTCAAATGCTCTTTAA
449 TCAGACACTTTAATGGCTACTGG-CAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
35947 AGGG
Statistics
Matches: 1996, Mismatches: 192, Indels: 131
0.86 0.08 0.06
Matches are distributed among these distances:
869 127 0.06
870 34 0.02
871 153 0.08
872 269 0.13
873 69 0.03
874 36 0.02
875 28 0.01
876 116 0.06
877 367 0.18
878 289 0.14
879 26 0.01
880 198 0.10
881 8 0.00
882 8 0.00
883 63 0.03
884 38 0.02
885 64 0.03
886 29 0.01
887 23 0.01
888 8 0.00
889 16 0.01
890 18 0.01
891 9 0.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.27
Consensus pattern (871 bp):
ATCCTACTACTGCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
CCAACCGACGAAACGAGCGGGCGGGCAGGCACTACCAGCCAGAGAGGCAGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAGGATTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGT
GCGCACACCCCCCGCCCCCCAATCGTCGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGGT
GCCCGAGCGAAAAAAAATGCGGCACCAGCACATGCGAGCCCAGCATGTGCACGCAACCCTCGGTC
TGGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTAGGATGAACTCCGTATGCCTAA
GTCAACCCACGAAACGAGCGTGGGCGCTCAGCCGACCAGAAGGGCAGGATGTGCAAGTCGGGGAT
CGGCCGGGTCCCCCCTACGTGCTGCA
Done.