Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168077.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34568

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2019--2064
20
2.3
20
85
3
58
23
28
19
28
1.98
2285--2310
5
5.2
5
100
0
52
19
38
42
0
1.51
2303--2344
14
3.1
15
80
19
56
7
42
21
28
1.79
2303--2339
13
2.7
14
80
20
51
8
43
24
24
1.81
2393--2419
10
2.7
10
100
0
54
14
0
7
77
0.97
2391--2455
10
6.3
10
71
10
51
13
1
4
80
0.95
2413--2458
24
1.9
24
86
8
67
13
2
2
82
0.85
2575--3100
58
8.9
58
85
7
664
44
8
13
33
1.75
2567--3100
121
4.5
119
90
5
775
44
8
13
32
1.75
6803--6874
13
5.6
13
71
14
60
45
0
4
50
1.21
13951--14011
28
2.2
28
79
5
70
59
0
0
40
0.98
15806--15842
19
1.9
19
89
10
58
21
0
18
59
1.38
16334--16404
35
2.0
35
86
0
97
26
18
19
35
1.95
21496--21539
18
2.4
18
96
0
79
27
18
11
43
1.84
24919--24985
31
2.2
31
91
5
109
25
20
23
29
1.99
25470--25574
52
2.0
52
86
0
147
25
27
8
38
1.85
25599--25630
11
2.9
11
95
0
55
46
28
0
25
1.53
25874--25970
25
4.0
24
77
4
95
20
32
9
37
1.85
26470--26574
52
2.0
52
88
0
156
25
28
8
37
1.85
26599--26630
11
2.9
11
95
0
55
46
28
0
25
1.53
28390--28438
14
3.6
14
75
20
50
79
8
2
10
1.01
28406--28438
14
2.2
16
89
10
52
75
9
0
15
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29229--29262
16
2.1
16
88
0
50
47
8
8
35
1.66
29551--29637
30
2.9
29
79
8
86
34
16
2
47
1.59
34286--34324
20
2.0
20
84
0
51
15
7
0
76
0.99

Tables:   1

The End!