Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168079.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34426

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3093--3206
33
3.5
33
85
4
149
34
14
26
24
1.94
7298--7376
27
2.6
31
75
13
85
39
6
0
54
1.26
7240--7391
30
5.1
29
69
15
87
38
3
1
55
1.27
9507--9580
18
3.8
21
77
18
97
54
10
4
31
1.54
9582--9625
21
2.1
21
86
0
61
47
6
6
38
1.57
9707--9735
3
9.7
3
100
0
58
68
31
0
0
0.89
9758--9805
19
2.6
19
77
6
55
75
0
14
10
1.06
11399--11595
17
11.5
17
67
15
59
37
17
14
30
1.90
11386--11589
51
3.9
51
72
11
148
36
16
14
32
1.89
11543--11587
17
2.6
17
92
0
81
37
15
11
35
1.83
11893--12029
44
3.1
43
77
7
139
45
13
5
36
1.65
11947--12027
22
3.7
21
75
12
81
46
13
7
32
1.71
11896--12093
90
2.2
89
85
2
254
46
12
6
34
1.68
13178--13215
13
2.9
13
84
11
51
10
21
2
65
1.35
16674--16712
2
20.5
2
87
10
55
53
0
2
43
1.14
16742--16790
23
2.1
24
81
11
57
59
10
4
26
1.48
18057--18115
19
3.2
19
82
2
75
54
10
1
33
1.44
18120--18188
21
3.4
21
78
8
70
53
7
7
31
1.56
18246--18341
3
32.0
3
91
0
57
66
15
0
17
1.25
18242--18341
6
16.5
6
91
1
83
66
16
0
18
1.26
18242--18341
9
11.3
9
81
7
71
66
16
0
18
1.26
19915--19945
2
15.5
2
100
0
62
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21028--21094
29
2.3
29
82
5
82
29
13
2
53
1.54
22048--22085
21
1.9
21
89
10
62
23
2
2
71
1.12
23024--23049
1
26.0
1
100
0
52
0
0
0
100
0.00
24007--24178
50
3.4
51
77
7
181
40
13
8
37
1.75

Tables:   1

The End!