Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168085.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34227

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
548--573
3
8.7
3
100
0
52
30
0
0
69
0.89
3849--3887
16
2.6
15
88
8
53
41
20
7
30
1.80
5499--5531
17
1.9
17
100
0
66
54
3
24
18
1.57
10326--10368
9
4.7
9
85
5
59
86
0
9
4
0.71
10484--10563
16
4.8
16
73
18
58
25
1
5
68
1.17
11061--11102
10
4.4
10
77
22
54
61
0
38
0
0.96
11353--11389
3
12.3
3
100
0
74
32
0
0
67
0.91
23301--23359
19
3.0
20
80
14
68
55
8
3
32
1.46
23406--23650
39
6.1
41
83
6
281
53
13
5
27
1.62
23480--23551
18
3.9
18
72
12
65
51
13
5
29
1.64
23664--23728
20
3.2
20
86
0
85
50
9
9
30
1.65
23662--23756
40
2.3
41
80
1
102
51
9
6
32
1.59
23704--23756
21
2.6
21
90
3
81
52
11
3
32
1.55
23761--23806
16
2.9
16
80
0
56
56
8
4
30
1.49
23744--23806
32
1.9
33
87
3
92
55
9
3
31
1.48
23780--23817
20
2.0
18
90
10
58
47
10
7
34
1.67
24444--24485
19
2.2
19
87
8
59
73
2
0
23
0.94
25538--25684
76
1.9
76
84
2
197
38
5
15
40
1.71
27422--27447
2
13.0
2
100
0
52
0
50
0
50
1.00
33171--33282
55
2.0
56
91
1
181
44
9
13
32
1.76

Tables:   1

The End!