Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168087.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_334, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34073

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2788--2901
14
7.9
14
69
11
68
24
0
23
51
1.48
2760--2986
88
2.6
87
79
8
246
25
0
24
50
1.49
2831--2989
57
2.7
57
78
12
155
25
0
25
49
1.50
2831--2994
28
5.7
28
75
7
116
24
0
24
51
1.49
3360--3409
18
2.7
19
75
25
54
74
6
0
20
1.03
4044--4079
13
2.6
14
91
4
56
5
2
8
83
0.89
5047--5095
22
2.2
23
85
10
66
34
16
18
30
1.93
4732--5294
218
2.6
222
79
5
570
38
17
19
23
1.93
5160--5629
111
4.2
111
81
3
446
40
17
17
24
1.91
5166--5627
222
2.1
222
81
5
522
40
17
17
24
1.90
5947--6230
137
2.1
135
84
5
367
36
14
14
34
1.86
9115--9149
9
3.8
9
88
7
52
14
0
2
82
0.77
9114--9150
10
3.8
10
89
7
58
13
0
2
83
0.74
10092--10165
38
1.9
38
97
0
139
31
10
13
44
1.78
13558--13666
30
3.7
28
73
15
85
22
0
27
48
1.57
13729--13764
17
2.1
17
89
0
54
16
0
27
55
1.42
15221--15259
3
13.0
3
88
0
60
28
0
0
71
0.86
15241--15286
24
1.9
24
82
8
58
45
2
2
50
1.26
15687--15915
67
3.4
67
73
10
239
44
15
18
21
1.86
15692--15787
33
2.9
32
77
7
102
46
17
17
17
1.84
15586--15936
137
2.6
134
86
5
451
46
13
17
22
1.83
15893--15981
45
2.0
45
93
0
151
47
15
17
19
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15970--16098
68
1.9
68
82
6
165
43
9
16
31
1.79
16065--16147
34
2.4
35
82
9
100
44
6
22
26
1.76
16166--16845
109
6.2
109
83
1
817
46
13
18
20
1.83
16337--16813
36
13.1
35
64
12
115
46
14
19
19
1.84
16362--16850
35
13.4
36
64
15
107
46
14
19
20
1.84
16166--16845
327
2.1
327
85
2
900
46
13
18
20
1.83
17925--17976
10
5.6
10
86
11
67
5
9
0
84
0.77
17926--17970
18
2.4
19
85
7
65
6
11
0
82
0.84
29006--29279
140
2.0
139
91
5
446
33
15
12
38
1.85
29416--29483
16
4.2
16
78
10
66
19
5
27
47
1.72
29945--30021
38
2.1
37
85
2
100
10
24
42
22
1.84
30583--30607
10
2.5
10
100
0
50
8
0
28
64
1.22
30969--31015
17
2.8
17
90
6
69
2
4
8
85
0.81
30966--31015
22
2.3
22
86
3
66
2
4
10
84
0.84
30952--31015
33
1.9
34
84
9
87
3
4
10
81
0.96
31177--31694
48
10.8
48
86
5
721
35
24
11
28
1.90

Tables:   1

The End!