Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168097.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_343, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32981

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1715--1740
1
26.0
1
100
0
52
100
0
0
0
0.00
4247--4281
14
2.5
14
95
0
61
20
22
8
48
1.76
6035--6075
21
2.0
21
85
0
55
56
9
12
21
1.65
7393--7704
20
15.4
20
73
14
194
53
11
5
29
1.58
7384--7706
41
7.9
41
85
4
352
54
11
4
29
1.56
7729--7821
20
4.6
20
79
1
78
51
10
6
31
1.62
7842--7882
18
2.3
18
77
22
50
48
12
4
34
1.62
7808--7871
32
2.0
33
81
9
78
54
9
3
32
1.48
7845--7882
20
2.0
18
90
10
58
47
10
5
36
1.61
12911--13073
19
8.3
19
77
10
123
37
4
4
53
1.40
12906--13032
10
12.9
10
71
14
86
37
2
3
56
1.31
12899--13056
10
15.9
10
71
12
76
39
3
3
53
1.35
15114--15171
29
2.1
27
83
6
71
56
1
1
39
1.19
15234--15294
12
4.8
13
76
11
56
50
0
1
47
1.10
15275--15299
10
2.5
10
100
0
50
64
0
0
36
0.94
18720--18787
34
2.0
34
85
0
91
48
10
2
38
1.52
24920--25076
52
3.0
52
88
3
219
39
8
26
24
1.85
26409--26443
14
2.5
14
95
0
61
20
22
8
48
1.76
29538--29606
22
3.1
22
80
14
79
57
13
1
27
1.44
29575--29850
20
13.9
20
70
15
171
53
10
5
30
1.57
29545--29855
41
7.7
41
83
5
341
54
11
4
29
1.55
29545--29856
81
3.9
81
82
8
343
54
11
4
29
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29896--29988
20
4.6
20
82
1
87
51
9
6
32
1.60
30009--30049
18
2.3
18
77
22
50
48
12
7
31
1.68
29975--30039
32
2.0
33
82
8
80
53
9
4
32
1.53
30012--30049
20
2.0
18
90
10
58
47
10
7
34
1.67
31121--31146
2
13.0
2
100
0
52
50
0
0
50
1.00
32456--32482
2
13.5
2
100
0
54
51
0
48
0
1.00

Tables:   1

The End!