Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168119.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31355

Tables:   1   

This is table  1  of  1  ( 75 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1114--1155
22
1.9
22
85
0
57
73
2
4
19
1.12
1110--1220
56
2.0
56
84
7
145
73
1
11
12
1.17
2876--2947
13
5.6
12
76
18
65
77
1
9
11
1.05
2874--2924
17
3.0
17
80
11
52
78
0
7
13
0.96
3206--3263
30
2.0
28
83
9
73
67
3
13
15
1.36
3678--3718
22
1.9
21
85
5
55
75
2
2
19
1.03
4388--4438
16
3.0
17
77
8
50
70
5
7
15
1.30
4515--4567
23
2.3
24
80
9
65
77
1
7
13
1.06
4747--4788
20
2.2
19
87
12
59
76
0
16
7
1.00
4747--4788
19
2.2
20
86
4
59
76
0
16
7
1.00
5611--5654
23
1.9
24
81
9
56
72
2
15
9
1.19
7325--7397
13
5.6
12
76
15
65
78
1
9
10
1.04
7333--7374
17
2.4
18
81
18
54
80
0
7
11
0.88
7655--7712
30
2.0
28
83
9
73
67
3
13
15
1.36
7819--7893
8
8.8
8
69
13
51
77
2
6
13
1.07
8119--8159
22
1.9
21
85
5
55
75
2
2
19
1.03
8434--8493
13
4.6
12
75
22
50
76
1
10
11
1.09
8434--8494
17
3.5
17
74
26
56
75
1
11
11
1.12
8767--8822
28
2.0
27
83
10
69
66
1
16
16
1.35
8823--8873
16
3.0
17
77
8
50
70
5
7
15
1.30
8950--9002
23
2.3
24
80
9
65
77
1
7
13
1.06
9186--9223
18
2.1
19
85
5
51
76
0
15
7
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10918--10990
13
5.6
12
76
15
65
78
1
9
10
1.04
10926--10967
17
2.4
18
81
18
54
80
0
7
11
0.88
11013--11054
17
2.5
17
77
14
50
73
4
9
11
1.22
11246--11303
30
2.0
28
83
9
73
67
3
13
15
1.36
12425--12475
16
3.0
17
77
8
50
70
5
7
15
1.30
12553--12605
23
2.3
24
80
9
65
77
1
7
13
1.06
12786--12827
20
2.2
19
87
12
59
76
0
16
7
1.00
12786--12827
19
2.2
20
86
4
59
76
0
16
7
1.00
13606--13647
22
1.9
22
85
0
57
73
2
4
19
1.12
13655--13698
23
1.9
24
81
9
56
72
2
15
9
1.19
13602--13715
56
2.2
52
83
12
135
74
1
11
12
1.15
15370--15442
13
5.6
12
76
15
65
78
1
9
10
1.04
15378--15419
17
2.4
18
81
18
54
80
0
7
11
0.88
15698--15755
30
2.0
28
83
9
73
67
3
13
15
1.36
15878--15946
32
2.1
34
81
13
81
73
4
5
15
1.18
16134--16174
22
1.9
21
85
5
55
75
2
2
19
1.03
16842--16892
16
3.0
17
77
8
50
70
5
7
15
1.30
16969--17021
23
2.3
24
80
9
65
77
1
7
13
1.06
17724--17781
23
2.5
23
80
2
62
72
5
8
13
1.26
17988--18093
54
2.0
53
81
9
126
72
1
12
13
1.20
19753--19825
13
5.6
12
76
15
65
78
1
9
10
1.04
19761--19802
17
2.4
18
81
18
54
80
0
7
11
0.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20083--20140
30
2.0
28
83
9
73
67
3
13
15
1.36
20518--20558
22
1.9
21
85
5
55
75
2
2
19
1.03
20898--20941
12
3.4
13
84
6
54
84
6
2
6
0.86
21351--21401
23
2.3
22
86
3
66
76
1
7
13
1.09
21583--21620
19
2.0
19
90
10
60
78
0
13
7
0.94
21624--21683
26
2.3
25
83
13
68
75
3
6
15
1.15
21743--21778
17
2.1
17
89
5
54
75
5
5
13
1.17
22383--22423
22
1.9
21
85
5
55
73
2
4
19
1.13
24147--24186
16
2.5
17
80
19
50
80
0
7
12
0.91
24184--24248
20
3.2
19
77
16
60
80
7
7
4
1.03
24202--24239
12
3.2
12
92
0
58
86
10
2
0
0.66
25688--25750
32
1.9
33
87
12
94
68
3
6
22
1.27
26075--26128
22
2.4
22
79
14
56
75
5
7
11
1.16
26150--27804
536
3.0
534
66
18
1309
65
4
12
17
1.41
26678--26737
15
4.2
15
74
18
56
80
1
10
8
0.99
26678--26803
22
6.0
21
74
14
93
79
3
7
9
1.04
26676--26804
65
2.0
65
81
13
151
78
3
8
10
1.07
26697--26812
54
2.1
56
81
10
132
78
4
8
8
1.08
27171--27216
18
2.8
18
81
15
55
78
0
8
13
0.97
27479--27518
21
1.9
21
85
10
55
75
2
2
20
1.04
27787--27844
20
3.1
19
73
19
50
74
3
8
13
1.19
28136--28177
20
2.2
19
87
8
59
78
2
7
11
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29201--29289
22
4.0
22
76
5
67
78
6
6
7
1.09
29678--29728
22
2.4
22
81
12
54
76
0
5
17
0.98
29689--29751
26
2.4
25
76
10
65
76
3
6
14
1.11
29984--30024
22
1.9
21
85
5
55
75
2
2
19
1.03
30153--30182
13
2.4
12
94
5
51
83
0
13
3
0.77
30608--30663
28
2.0
27
83
10
69
66
1
16
16
1.35
30664--30714
16
3.0
17
77
8
50
70
5
7
15
1.30
30791--30843
23
2.3
24
80
9
65
77
1
7
13
1.06
30978--31056
32
2.4
32
81
8
88
72
5
8
13
1.26

Tables:   1

The End!