Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168142.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29638

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285--369
45
1.9
45
90
7
138
36
21
10
31
1.87
1569--1659
21
4.4
21
78
8
96
31
12
10
45
1.76
7633--7679
23
2.0
25
84
16
64
25
10
4
59
1.49
7563--7697
66
2.0
68
84
5
177
25
5
7
60
1.46
7863--7902
17
2.5
16
88
8
55
45
2
2
50
1.28
8267--8299
16
2.1
16
94
5
59
63
0
0
36
0.95
8517--8571
21
2.6
21
79
0
65
54
0
0
45
0.99
9372--9413
11
3.8
11
87
0
66
23
0
26
50
1.50
9448--9594
52
2.8
53
86
4
140
38
7
27
26
1.83
10546--10700
52
3.0
52
81
3
152
42
7
22
27
1.81
11264--11340
24
3.1
25
83
9
79
41
7
31
19
1.80
11272--11343
24
2.9
24
84
12
101
38
6
33
20
1.80
11647--11803
52
3.0
52
84
5
176
42
8
23
25
1.83
12374--12442
24
2.8
24
77
18
79
36
10
36
17
1.84
12374--12450
25
3.1
25
77
17
88
35
9
36
19
1.84
12693--12734
11
3.8
11
93
0
75
21
0
28
50
1.49
12692--12734
22
2.0
22
100
0
86
23
0
27
48
1.51
12759--12912
51
3.0
51
83
4
150
42
8
22
25
1.82
17441--17584
62
2.3
63
80
11
163
40
13
12
34
1.82
17527--17921
124
3.2
123
78
4
389
35
15
13
35
1.87
19920--19975
21
2.7
21
80
8
69
17
19
21
41
1.91
21844--21875
8
4.0
8
100
0
64
87
0
0
12
0.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26410--26453
14
3.2
13
84
9
61
81
4
11
2
0.92
26795--26851
12
4.9
12
76
8
55
78
0
14
7
0.94
26798--26881
34
2.4
34
84
9
100
72
0
17
9
1.10
26798--26851
17
3.2
17
78
19
67
77
0
14
7
0.97
28040--28548
21
22.8
21
69
17
212
40
10
14
34
1.79
28008--28476
25
19.7
24
68
19
138
41
11
13
34
1.79
28012--28171
47
3.4
47
91
0
232
41
11
13
33
1.79
28038--28545
46
11.4
45
74
17
196
40
10
13
35
1.79
28199--28270
36
2.0
35
94
2
126
38
11
15
34
1.83
28218--28341
14
10.3
13
62
29
53
41
11
13
33
1.80
28227--28545
92
3.5
91
82
7
328
42
9
12
35
1.76
28801--28839
20
2.0
20
89
0
60
33
15
23
28
1.95
28803--28897
42
2.3
42
81
3
111
31
12
21
34
1.91
28954--28996
16
2.6
16
85
3
59
41
9
11
37
1.74
29182--29307
42
3.0
42
76
11
132
22
11
19
46
1.82

Tables:   1

The End!