Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168152.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_393, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29191

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2735--2938
112
1.8
112
83
5
270
34
13
12
39
1.82
3698--3732
12
2.9
12
95
0
61
8
25
20
45
1.79
3814--3858
4
11.2
4
85
0
63
24
6
0
68
1.13
4325--4372
25
2.0
24
88
12
71
66
0
12
20
1.24
5166--5341
85
2.1
86
86
5
241
33
2
20
43
1.64
6933--6994
25
2.4
25
83
5
70
35
4
20
38
1.74
8084--8132
17
2.9
16
77
17
55
77
2
12
8
1.07
10468--10493
2
13.0
2
100
0
52
50
0
0
50
1.00
13653--13690
14
2.8
14
84
4
51
65
0
0
34
0.93
13717--13753
17
2.1
18
90
5
58
67
0
0
32
0.91
13807--13841
15
2.3
15
90
0
52
54
0
0
45
0.99
15044--15080
19
1.9
19
100
0
74
27
0
16
56
1.40
15256--15290
18
1.9
18
94
0
61
51
2
5
40
1.40
16256--16312
22
2.5
24
80
11
66
45
14
10
29
1.78
16381--16414
15
2.3
15
100
0
68
67
23
0
8
1.18
20060--20113
25
2.2
25
93
0
90
35
9
16
38
1.81
20303--20337
17
2.1
17
100
0
70
17
17
31
34
1.93
20401--20447
23
2.0
23
95
0
85
25
19
31
23
1.98
20337--20575
87
2.7
87
96
0
442
23
17
35
23
1.96
20488--20534
23
2.0
23
95
0
85
25
19
31
23
1.98
20594--20638
23
2.1
21
88
12
65
26
20
31
22
1.98
20471--20821
104
3.4
104
95
0
641
22
17
34
25
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20786--20859
32
2.3
32
92
0
130
21
16
29
32
1.95
21081--21118
14
2.6
15
84
16
53
73
0
0
26
0.83
22924--22962
12
3.1
12
85
7
51
84
0
2
12
0.72
23004--23045
15
2.9
15
76
16
52
69
0
4
26
1.08
23934--23977
21
2.1
21
83
8
54
52
13
2
31
1.53
25856--25888
15
2.3
15
89
5
50
33
9
0
57
1.30

Tables:   1

The End!