Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167858.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_128, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72428

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20254--20278
1
25.0
1
100
0
50
100
0
0
0
0.00
21974--22375
201
2.0
201
88
2
603
20
22
22
34
1.97
23219--23266
21
2.3
21
75
3
53
8
39
0
52
1.32
24219--24247
15
1.9
15
100
0
58
13
27
6
51
1.66
26644--26669
10
2.6
10
100
0
52
30
0
0
69
0.89
27469--27501
16
2.1
16
94
0
57
12
9
36
42
1.74
29901--29949
24
1.9
24
84
12
62
34
6
2
57
1.35
37846--37880
15
2.2
16
90
10
54
68
2
0
28
1.04
38009--38078
12
6.2
11
70
17
54
48
0
4
47
1.21
37999--38043
22
2.0
23
86
4
65
51
0
2
46
1.13
38611--38654
22
2.0
22
86
8
63
50
2
0
47
1.13
38757--38790
16
2.2
16
89
5
52
52
2
0
44
1.16
39331--39363
15
2.1
17
88
11
52
36
6
9
48
1.60
40361--40403
23
1.9
23
85
4
61
9
4
2
83
0.87
40592--40631
21
2.0
20
85
14
55
40
2
0
57
1.12
41612--41690
27
3.1
23
72
18
50
46
1
0
51
1.08
41587--41644
25
2.4
25
83
13
70
44
0
1
53
1.10
41604--41712
50
2.2
50
79
9
116
50
1
0
46
1.18
41802--41892
43
2.3
42
81
11
111
67
2
0
30
1.03
45860--45889
11
2.7
11
100
0
60
20
0
26
53
1.46
45915--46070
52
3.0
52
80
1
179
43
9
21
25
1.83
46225--46256
16
2.1
16
94
5
57
31
18
37
12
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46649--46713
25
2.6
25
82
0
85
32
6
40
21
1.78
46649--46735
25
3.6
22
75
14
66
32
5
37
24
1.79
46947--46976
11
2.7
11
100
0
60
20
0
26
53
1.46
47003--47158
52
3.0
52
83
5
190
41
9
23
25
1.84
47314--47346
16
2.1
16
100
0
66
30
18
39
12
1.87
53115--53195
41
2.0
41
90
4
128
38
13
9
38
1.78
53624--53675
16
3.4
16
75
20
56
40
0
1
57
1.10
53624--53689
30
2.2
30
83
0
78
43
0
1
54
1.09
54969--55011
19
2.3
19
88
8
61
41
0
0
58
0.98
55207--55233
2
13.5
2
100
0
54
51
0
0
48
1.00
56045--56078
16
2.1
16
88
0
50
47
11
8
32
1.71
63809--63888
34
2.4
34
83
8
92
18
8
10
62
1.52
64461--64492
16
1.9
17
93
6
57
46
6
0
46
1.27
64465--64518
28
2.0
27
82
17
67
48
3
0
48
1.19
64712--64764
23
2.3
23
77
6
54
9
16
9
64
1.49
65106--65149
22
2.0
22
91
8
72
22
22
4
50
1.67
67174--67214
20
2.0
20
100
0
82
29
34
4
31
1.79
71237--71268
13
2.4
14
85
15
50
34
0
0
65
0.93
71906--71962
20
2.8
20
82
10
55
56
0
15
28
1.40

Tables:   1

The End!