Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168159.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_4, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33012953
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Warning! 65000 characters in sequence are not A, C, G, or T
File 80 of 160
Found at i:15695662 original size:895 final size:890
Alignment explanation
Indices: 15692765--15697084 Score: 5712
Period size: 892 Copynumber: 4.9 Consensus size: 890
15692755 GTGCTGTCCC
* * * *
15692765 AACCCTCGGTCCAATCCGATCTTAGACTGGGAACGAACTCCGTATGCCTAAGCCAGCCGACGAAA
1 AACCCTCGGTCCGATCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * * * *
15692830 CGTGCGGGCTGGCAGGAGAGCACTACGTCGGCTAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
66 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG-CGTGGATCGAT
* * *
15692895 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTCCCATGTCAATGCCATTTTTCTGGCTT
130 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTT
15692960 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
195 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
** *
15693025 ATTTTTCACAAATTTT-GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTT
260 ATTTTTCA-TGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* *
15693089 TTGGCCCCAAACTTGTTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTA
324 TT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTA
*
15693154 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAA
388 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
15693219 TGGCTACTGGAAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
453 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
15693284 TGATGAGAG-ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA-TGTGCAC
518 TGATGAG-GCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATTGTGCAC
* * ** * *** *** * *
15693347 A-CACCCCCCCGGCCCCCCCGATCGTCGGGACACC-AT--CGCCGAAAAACCT-AAC--CGACGG
582 ACCGCCCCCCCGCCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCATCGGCGATGG
** * * * *
15693405 CAT--TG--G--G---GATTCGGCACCAGCACATCCCCGAGCCCAGCATGTGCTGCCGCAACCCT
647 TGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * *
15693461 TGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATAT
712 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
** * ** * * *
15693526 GCCTAAGTCAACAAACGAAACGAGCGAGCGGGCGGTCAGCCGGCCAGAGGGGTGGGATGCGTAAG
777 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * * **
15693591 CCGGGGATCGACCGGGTCCCCCTTTGCGAGCTACCGATCCTGCTGCCGT
842 CCGGGGATCGGCTGGGTCCCCCTCTACGTGCTGCCGATCCTACTATCGT
* * * * * *
15693640 AACCCTTGATCCAATCTGATCTTAGACTGGGAATGAACTTCGAATGCCTAAGCCAACCGACGAAA
1 AACCCTCGGTCCGATCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * * * *
15693705 --A------GAGCGGGCAGGTACTACGCCGGGCAAAGAGGCGGGATGCACAAGCCATGGATCGAT
66 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG-CGTGGATCGAT
* *
15693762 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTATGCCATGCCAATGCCTTTTTTCTAGCTT
130 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTT
*
15693827 TTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
195 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * * **
15693892 ATTTTTCATAATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGTCTTT
260 ATTTTTCATGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * *
15693957 TGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTCAGCTAAA
325 TGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAA
* *
15694022 AACTCGAATTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATG
390 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * *
15694087 GCTACTGGCAGCAAACTTGTAATATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGATGTTTG
455 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* *
15694152 ATGAGACATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGGACAC
520 ATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT-TGTGCACA-
* * * * * * *
15694217 CCGCCCTCCCGACCCCTCCGATCGTCAAAACTCCAATGCCGCCGGTCAGGTTCACCGGGGATGGT
583 CCGCCCCCCCGCCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCATCGGCGATGGT
* * * **** * * *
15694282 GTCCCGACGAACAAAAATGCGACACCAGCACATTTTTGAGCCCAGCATGTGCT-ACACAACCATC
648 GTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * *
15694346 GGTCCTGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATG
713 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * **
15694411 CCTAAGTCAACCCATGAAACGAGCATACGGGCACTCAGTCGGCCAGAGGGGCGGGATGCGCAAGC
778 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGGGATGCGCAAGC
* * * * *
15694476 CGAGGATCGGCTGGGACCCCCTCTACGTGCTGCCGATCCTGCT-GCCT
843 CGGGGATCGGCTGGGTCCCCCTCTACGTGCTGCCGATCCTACTATCGT
* * * * * *
15694523 CAACCCTCGGTCTGGTCAAATTTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAA
1 -AACCCTCGGTCCGATCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * *
15694588 ACGAGCGGGCGGGTGGGCGGGCACTACGTCGACCAGAGAGGCGGGTTGCGCAAACCGTGGATCGA
65 ACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGC-AAGCGTGGATCGA
* * * *
15694653 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGACACGGCAATGCCATTTTTCTGGCT
129 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCT
* * *
15694718 TGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTCCATGGCAAGATGACTCGTTTTC
194 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
15694783 TATTTTTCATGATTTTCGAAACTTTTTTCGATTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
259 TATTTTTCATGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * *
15694848 TTACCCCAAACTTGGTAGACGTGATCCTTGT-TATTTTGTTGGCATGCACAAAAAAATTTAGCTA
324 TTGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTTTTGGCATGCACAAAAAAATTAAGCTA
15694912 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
388 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * * * *
15694977 TGGCTACTGGTAGCAAACCTGTAATATCTCAAGTGCCCTTTAAGGGGGTGTGAGTTCTCGATGTT
453 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
15695042 TGATGAGGCATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCCCACATCATCTATGCAC
518 TGATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT-TGTGCAC
* *
15695107 ACCGGCCCCCCCCGACCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCATCAGCGA
582 ACC-G-CCCCCCCG-CCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCATCGGCGA
* * * * * *
15695172 TGGTGTCCCGACGAAGAAAAATGCGACACCAGCACCTGCTCGAGCCCAACATGTGCTGCCGTAAC
644 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * * *
15695237 CCTCAGTCCGATCCGATCTTAGACTGGGAATTAACTTCGTATGCTTAGACTGGGAATGAACTCCG
709 CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * *
15695302 TATACCTAAGTCAACCCACGAAAAGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGGGATGCGT
774 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGGGATGCGC
* * * *
15695367 AAGCCGGGGATCGGCTGGGTCCTCCTTTGCGTGCTGCCAATCCTACTATCGT
839 AAGCCGGGGATCGGCTGGGTCCCCCTCTACGTGCTGCCGATCCTACTATCGT
* * *
15695419 AACCCTCGGTCCGATCAAATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAACCGATGAAA
1 AACCCTCGGTCCGATCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*
15695484 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGTGGCGGGATGCGCAAGCGATGGATCGAT
66 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCG-TGGATCGAT
* * *
15695549 AGGGTGGTAGGTGGGTTTAGGCATATTTTCGTATTTCTGCCATGCCAATGCCATTTTTCTAGCTT
130 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTT
* *
15695614 GTAAATTCATACAATGGTCCCTCAACCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
195 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * * *
15695679 ATTTTTCATGATTTTTGAAACTTTTTACGATTTGGGATTTTTGAAAATTTTTTCAAAAGGAGTTT
260 ATTTTTCATGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
*
15695744 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGACATGCACAAAAAAATTAAGCTAA
325 T-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAA
* * * *
15695809 AAACTCAAAATGTAGAAG--TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAAT
389 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
*
15695872 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGTTCTCGAGGTTT
454 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
15695937 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA-TGTGCGCAC
519 GATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATTGTGCACAC
* * * * * *
15696001 AC-CCCCTCGGCCCCCCTCGATCGCCGAAACCCCAATGCCGTCGATCAGGTTC-TCTGGCGATGG
584 -CGCCCCCCCGCCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCATC-GGCGATGG
* ** * * * ** * *
15696064 TGTCCCTATTAGGAAAAATACGGCACTAACACATGCGAGAGTCCAGCATGTGCTGGCGCAACCCT
647 TGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * ** *
15696129 CAGTCCGGTCCGATCTTAGACTGGGTATGAACTCCGTATGCTTAGATTCAGAATCAACTCCGTAT
712 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
15696194 GCCTAAGTCAACCCATGAAACGAGTGTGCAGGCACTCAACCGGCCACAAGGGGCGGGTTGCACAA
777 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAACCGGCCA-GAGGGGCGGGATGCGCAA
* * * *
15696259 GCCGGGGATCGG-TCGGGTCCCCCTCTACCTACTGTCGATCCTACTATCGC
841 GCCGGGGATCGGCT-GGGTCCCCCTCTACGTGCTGCCGATCCTACTATCGT
* * *
15696309 AA-CCT-GTGATACGATCTGATCTTAGACTGGGAATTAACTCCGTATGCCTAAGCCAACCGACGA
1 AACCCTCG-G-TCCGATCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
15696372 AACAAGCGGGCGGACGGGCGGGAACTATGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
64 AACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG-CGTGGATCG
** * * *
15696437 ATAAAGTGGTAGGTGGGTTTAGGCACAACTTCATATTTTTTCCATGCCAATGCCATTTTTCTAGC
128 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGC
*
15696502 TTGTAAATTAATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
193 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * **
15696567 CTATTTTTCACGATTTTTGAAAGTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGT
258 CTATTTTTCATGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG-
*
15696632 TTTTACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCT
322 TTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCT
* * *
15696697 AACAACTCGAAGTGTACAAGATTTTGTGACAATTTGCAAAAAGTGTCCCCATTTCAGACACTTTA
387 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
*
15696762 ATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
452 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * * *
15696827 TTGATGAGGCATAGGTGGCCAATAT-AGTGGCCGAGTACCAACACCCATCGCACATCATGTGCGC
517 TTGATGAGGCATAGGGGGCCAATATAAG-GGCCAAGTACCAGCACCCATCGCACATCAT-TGTGC
* * * *** *
15696891 ACACCCGCCCCTCAGCCCCCCCCGATCGTCGAAACCACAATGCTATCGGTCAGGTTCACCGGCGA
580 ACA-CCGCCCCCCCGCCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCATCGGCGA
* *
15696956 TGGTGTCCCAACGAAGAAAAATACGGCACCAGAACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
644 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * *
15697021 CCTCGGTCCGGTCCGATCTTAAACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAGCTCC
709 CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
15697085 ATATTCTTAG
Statistics
Matches: 3014, Mismatches: 375, Indels: 92
0.87 0.11 0.03
Matches are distributed among these distances:
866 239 0.08
867 220 0.07
868 7 0.00
870 25 0.01
871 2 0.00
873 7 0.00
874 2 0.00
875 58 0.02
876 5 0.00
878 1 0.00
880 1 0.00
883 2 0.00
884 211 0.07
885 31 0.01
886 1 0.00
888 3 0.00
889 197 0.07
890 418 0.14
891 11 0.00
892 620 0.21
893 10 0.00
894 258 0.09
895 609 0.20
896 75 0.02
897 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
AACCCTCGGTCCGATCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGTGGATCGATA
GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTG
TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
TTTTTCATGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAA
ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
TGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATTGTGCACACCG
CCCCCCCGCCCCCCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCATCGGCGATGGTGTC
CCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
AAGTCAACCCACGAAACGAGCGTGCGGGCACTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGG
GGATCGGCTGGGTCCCCCTCTACGTGCTGCCGATCCTACTATCGT
Found at i:15697074 original size:26 final size:26
Alignment explanation
Indices: 15697038--15697116 Score: 113
Period size: 26 Copynumber: 3.0 Consensus size: 26
15697028 CCGGTCCGAT
* *
15697038 CTTAAACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTATATG
* * *
15697064 CTTAGACTGGGAATGAGCTCCATATT
1 CTTAGACTGGGAATGAACTCTATATG
15697090 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCTATATG
15697116 C
1 C
15697117 CTAAGTCAAC
Statistics
Matches: 45, Mismatches: 8, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 45 1.00
ACGTcount: A:0.29, C:0.18, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTATATG
Found at i:15697868 original size:26 final size:26
Alignment explanation
Indices: 15697818--15697870 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15697808 CCGGTCCGAT
**
15697818 CTTAGACTGGGAATGAACTTGGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15697844 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15697870 C
1 C
15697871 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15698736 original size:26 final size:26
Alignment explanation
Indices: 15698698--15698750 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15698688 CTGGTCTGAT
15698698 CTTAGACTAGGAATGAACT-TCGTATG
1 CTTAGACTAGGAATGAACTCT-GTATG
*
15698724 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
15698750 C
1 C
15698751 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCTGTATG
Found at i:15699617 original size:26 final size:26
Alignment explanation
Indices: 15699588--15699640 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15699578 CCGGTCTGAT
15699588 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15699614 CTTAGACTGGGACTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15699640 C
1 C
15699641 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15699910 original size:890 final size:888
Alignment explanation
Indices: 15697194--15713779 Score: 13552
Period size: 890 Copynumber: 18.6 Consensus size: 888
15697184 AGCCGGCTAA
* *
15697194 AGAGGCGGGATGCGCAAACCGTGGATCGACAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
*
15697259 TCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
15697324 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * * *
15697389 GATTTTTTAAACTTTTTTCAAAAGGAGTTTTGGCCCCAAGCTTGGTAGATGTGATCCTTGTATTT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
15697454 TTCTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACCATTTGG
261 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
15697519 AAAAAGTGTCCCCACTTCAGACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGC
326 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * *
15697584 TCTTTCAGGGGGTGTGAGTTCTCAAGGTTTGATAAGGGATAGGGGGCCAATATGAGGGCTAAGTA
391 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
15697649 CCAGCACCCATCGCACATCATGTGCGCATACCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGC
456 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGC
* * * ** *
15697714 CGCCGGTCAGGTTCTCCGGCGATGGTGT-TCGTTCAAAGAAAAATGTGGCACCAGCACATGCCTG
520 CGCCGGTCAGGTTCTCCGGCGATGGTGTCCCG-ACGAAGAAAAATACGGCACCAGCACATGCCCG
* * * * * **
15697778 AGCCTAGCATGTGCTACCTCAACTCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTGGTAT
584 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
15697843 GCTTATACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCTG
649 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
*
15697908 TCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
714 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * **
15697973 CAGCTGCCGCAACCCTCCGTATGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
779 CTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * **
15698038 ACCAACGAAACGAGCGGGC-GAGCAGACGGGAACTACGCCGATCAG
844 ACCGACGAAACAAGCGGGCGGA-CGGGCGGGCACTACGTCGGCCAG
15698083 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15698148 TCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACATTGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
15698213 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * * *
15698278 GATTTTTTAAAATCTTTTCAGATGGAGTTTTGGCCCCAAACTTGTTAGACGTGATTCTTGTATTT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
15698343 TTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCGCAGTGTACAAGATTTTGTGACCATTTGA
261 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* ** *
15698408 AAAAGGTGTTTCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
326 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
15698473 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTAATGAGAGATAGGGGCCCAATATAAGGGCCAAGTA
391 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
15698538 CCAGCACCCATCGCACGTCATGTGCGTACA--------CCCCCCGATCGTCGGAACCCCAATGCC
456 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC
* ** *
15698595 GCCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAG
521 GCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* * * * *
15698660 CCCAGCATGTGCTGCTGCAACCCTCGATCTGGTCTGATCTTAGACTAGGAATGAACTTCGTATGC
586 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * *
15698725 TTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCGTTCAACC
651 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* * * ** * * * *
15698790 GTCCAGAGGGGCGGGATGCACAAGCTGGGGATAAGCCGGGTCCCCCTCTGTGTGCTGCCAATCTT
716 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCT
* * * * * * * *
15698855 GCCGCCGTAATCCTCGGTCTGGTCTGAACTTAGACTAGGAATTAACTCCGTATGCCTAAGCCAAT
781 GCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* *
15698920 CGATGAAACAAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAG
846 CGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
* *
15698963 AGAGGCGGGATGCACAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15699028 TCTGCCATGCCAATGCCATTTTTTTGGCTTGCAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * *
15699093 GAAGTTTCATGGCAAGACGACTCGCTTTCAATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * * * *
15699158 GATTTTTTAAACTTTTTTCAAAAAGAGTTTTGGCCCCAAGCTCGGTAGACGTGATCCTTGTATTT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
15699223 TTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACCATTTGA
261 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
15699288 AAAAAATGTCCCCACTTCAGACACTTTAATGGCTATTGCCAGCAAACCTGTAAAATCTCAAATGC
326 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * *
15699353 TCTTTAAGGGGGTGTGAGTTCTTGAGTTTTGATCAGGTATAGGGGGCCAAAATAAGGGCCAAGTA
391 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
15699418 CTAGCACCCATCACACATCATGTGCGCACACCGCCCGGTCCCCTCCTATCGTTGGAACCCTAATG
456 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCC-CCGATCGTCGGAACCCCAATG
* * * * * *
15699483 TCGCCGGTCAGGTTCTTCGGTGATGGTGTCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCGG
519 CCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
* **
15699548 AGCCCAGCATGTGCTACCGCAACCCTCAATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
584 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * ** *
15699613 GCTTAGACTGGGACTGAACTCCGTATGCCTAAGTCAACCTACAAAACGAGCGTGCAGGCATTCAA
649 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
** * * * * *
15699678 CCATCCAGAGGGGCGGGATGTGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGTTGCCAATC
714 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * *
15699743 CTGCTGTCGTAACCCTCAGTCTGGTCTGATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCCA
779 CTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
15699808 ATCGATGAAACAAGTGGGTGGACAGGCGGGCACTACGTCGGCCAG
844 ACCGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
*
15699853 AGAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * * *
15699918 TCTGTGGCA--CCGATGCCATTTTTTTGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCAG
66 TC--TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* * *
15699981 GTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCTCGATTTTTGAAACTTTTTACGGTTC
129 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC
* *
15700046 GAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTT-ATAGACGTGATCCTTGTAT
194 GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
15700110 TTTTGTTGGCATGCACAAAAACATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
259 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * *
15700175 AAAAAAAGTGTCGCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAAT
324 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* *
15700240 GCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCACTATAAGGGCCAAG
389 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * *
15700305 TACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCGGCCCCCCTATCGCCAGAACCCCAAT
454 TACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGTCGGAACCCCAAT
* * * ** * * *
15700370 GCCGTCGGTCAAGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGACACCAACACATGCTC
518 GCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCC
* * *
15700435 GAGCCGAGAATGTGCTGCCGTAA-CC-C--T-C-G---G-TC-----C--GG--T---CT--G-A
583 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
15700475 T-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGTAACGAGCGTGCGGGCGTTCA
648 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * *
15700539 GCCGGCTAGAGGGGTGGGATGCGCTAGTCAGGGATCGGTTGGGTCCCCCTCTGCGTGCTGTCGAT
713 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGAT
* ** *
15700604 CTTGCTGCCGCAACCCTC-GATCCAGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGC
778 CCTGCTGCCGCAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * **
15700668 CAACCGACAAAACGAGCGGGCGGGCGGGCGGGCGGGCACTATATCGGCCAG
842 CAACCGACGAAAC-A---AGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
* *
15700719 AGAGGCAGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* ** *
15700784 TCGGCTGTGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * ** *
15700849 GAAGTTTCATGGCAAGACGACTCATTTTCTATTCTTCATGATTTTCAAAACTTTTTACGGTTCGA
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * *
15700914 GATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCTAACTTGGTAGACGTGATCCTTGTATTT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
15700979 TTTTTGG-AGTGCACAAAAACATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
261 TTGTTGGCA-TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
15701043 AAAAAAGAGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATG
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* ** * * * *
15701108 CTTTTTAATAGGGTGTGAGTCCTCGAGGTTTGATGAGGGATAGGGGGACAATATAGGGGACAAGT
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
15701173 ACCAGCACCCATCGCACATCATGTGCACACACCCTCCGGCCCCCCACGATCGTCGGAACCCTAAT
455 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCC-CGATCGTCGGAACCCCAAT
* * * *
15701238 GTCGCTGGTCAGGTTCTCCGGTC-AAGGTGTCCC-AGTGAAGAAAAATACGGCACCAGCACATGC
518 GCCGCCGGTCAGGTTCTCCGG-CGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGC
* * * * * * *
15701301 CCGAGCGCAGCATGTGCTGACGCAACCCTCGGTCTGGTCCGGTCTTAAACTGGGAATGAACTTCG
581 CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * *
15701366 TATACTTAGACTAGAAATGAACTCCGTATGCCTACGTCAACCAACGAAACGAGCGTGCGGGCGCT
646 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * * *
15701431 CAGCCAGCCAGAGGAGCGGGATACGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTGCCG
711 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCG
* ** * * *
15701496 ATCCTGCTGCCGCAACTCTTGGTCCGGTCTGATCTTAGACTGGGAATGCACTCCATATGCCTAAG
776 ATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
15701561 CCAACCGACGAAACCGGCGGACGGGCGGGCGGGCGGGCGGGCACTACGCCAGCCAG
841 CCAACCGACGAAA----C--A--AGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
* * * *
15701617 AGAGACGGGATGTGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCCTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
15701682 TCTG-TAGTGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATG
66 TCTGCCA-TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG
* * * *
15701746 TGAAGTTTCACGGCAAGACGACTCATTTTCTATATTTCATGATTTTTGAAACTTTTTACGGTTCG
130 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG
* * * *
15701811 GGATTTTTTTAAATTTTTTTAGATGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATT
195 GGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* *
15701876 TTTTTTGGCATGCA-AAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
15701940 AAAAAAGTGTCCTCATTTCAGATACTTTAATGGCTACTGGCAGCAAACCTGGAAAATCTCAAATG
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
** * *
15702005 CTCTTTAAGCCGGTGTGACTTCTCGAGGTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGT
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
15702070 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCACCCCCGATCG-CTGGAATCCCAA
455 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGC-CCCCCGATCGTC-GGAACCCCAA
* * ** * *
15702134 TGCCGTCGGTCAGGTTCTTCAACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATTCC
517 TGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCC
* * *
15702199 CGAGCCCAGCATGTGCTGCCTCAACCCTCGGTCCGGTCTGATCATAGACTGGGAATGCACTCCGT
582 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
* ** ** ** ** * *
15702264 ATGCCTAG---GCCAACCAA---CG-A-----AA-T----GGACG-GGCGGGCAG-GCGGGCACT
647 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGCGGGCGCT
* * * * * ** * ****** * *
15702310 -ACGCCAGCCAGAGAGGTGGGATACGCAAGCCGTGGATCAATAGGGT-GGTAGGTGGGT-TTAGG
711 CA-GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT--G
* * *** ** *
15702372 CAC-ATCTTCATATTTCTGCCATGCCAATGCCATTTTTTCTGG-CTTGTAAATTCATAC----AA
773 C-CGATC--C----TGCTGCC--G-CAA--CC-CTCAGTCTGGTC-TG-ATCTT-AGACTGGGAA
** * * * *** * *** * ** **** ***
15702431 TGGTC-CCTTAAGCCT---TCATGTGAAGTTTC-A-C-GGCAAGACGACTCGTTTTCTA--TTTT
822 TGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGC-GGACG-GGCGGGCACTACGTCGG
*
15702487 TCATG
885 CCA-G
***** ** **** * ** * *** ** ** * *
15702492 ATTTTTGAAACT-TTTTA-CGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGC-C--
1 AGAGGCGGGA-TGCGCAAGCCG-T--GGA---TCGATAGGGTGGT-AGGTGG-GTTTAGGCACAT
* ** * *** * *
15702552 C--CAAACTTGGTAGACATGATCC--TTTTATTTTTTTTGGCATGCTCAAAAAAATTCAGCTA-A
57 CTTCATA-TTTCT-GCCATG--CCAATGCCA-TTTTTCTGGCTTG-T-----AAATTCA--TACA
*** ** ** * * **
15702612 AAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTC-AGAC-ACT--T
109 ATGGTC--CCT-T--AAG--CCT-T---CATGTG----AAGT-T--TCATGGCAAGACGACTCGT
* * ** * * * * * * * * * **
15702673 TAATGGCTA-CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT-GTGAGTTCTGG
156 T--T-TCTATTTTTCA-C-GA--T-T----TTTGAAA--CT-TTTTA-CGGTTCGGGATTTTTTA
*** ** * ** ** * * * * *
15702736 GGGTTTGAT--G-AGG-GATAGGGGGCCAATA-TAAGGGCAAGTACCAGT-ACCCATTGCATATC
205 AAATTTTTTCAGAAGGAGTTTTGGCCCCAA-ACT--TGG-TAG-A-C-GTGATCC-TTGTAT-TT
* ****** * * ** * * * ** *** **
15702795 ATG-T-G--TGCAC--ACCCCCCCCGC--CACCCCCGATCGTCGGAACCCGAATGCCGTCGGTCA
261 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA-AGT--GTACAAG-ATTTTGT-GACCA
** ** * *** *** * ** ** * **
15702852 GGTTCTTCGATGATGGTGTCCCGA-CGAAGA-AAAAT-GTGGC-ACCAGCA-CATGCCCG--AGC
321 ---T-TT-GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* * ** *** ***** ** * ** * * **** *
15702910 CCAGCATGTGCTGCCGCAACCCTCAT-TCCGATC-CGATCTTAGACTG-GGTAT-GAACTCC-GT
381 TC-TCAAATGCT-CTTTAA-GGGGGTGTGAGTTCTCGAGGTTTGA-TGAGGGATAGGGGGCCAAT
* * * ** * *** * *
15702970 AT----GCTTAAGT--CA--ACCCA-CGGA-A-CGAGCGTGCGGGCGCTCAGTCGG---CCAGAG
442 ATAAGGGC-CAAGTACCAGCACCCATCGCACATC-A-TGTGCGCACAC-CCCCCGGCCCCCCGAT
* * **** * * * ** ** * *
15703021 GGGCGGGATGAGCAA-GCCG-GGGATCGGCCGGGTC-CCCCCTCTGCGTGCTACCGATC-----C
503 CGTC-GGAACCCCAATGCCGCCGG-T---CAGGTTCTCCGGCGATG-GTG-TCCCGA-CGAAGAA
* * * * ** * * * ** * ** * ** *
15703078 CATTGCTGCAACCCTCA-ATCTGGTCTGATCTTAG-AT-TG-GGAATG-AA--CTCTGT-ATGCC
560 AAATACGGC-ACCAGCACA--T-GCCCGAGCCCAGCATGTGCTG-CCGCAACCCTCGGTCCGGTC
* * * * ** * *** * * * *
15703135 TCAGC-CA-ACT--G-ACGAAACGGGCG-A-GC---GAGTGGGCGGGCACTACGCCA-ACC--AG
620 TGATCTTAGACTGGGAATG-AAC-TCCGTATGCTTAGACTGGGAATGAACTCCG-TATGCCTAAG
** ** ** ** * * * ** *
15703187 --AGAGGCGGGATGCGCAAGCCGTG-GATCGAT-AG--GG-TAGTAGGTG-GGTTTAG-GCACAT
682 TCA-ACCCACGAAACG--AG-CGTGCGGGCGCTCAGCCGGCCAG-AGGGGCGGGAT-GCGCA-AG
***** * * ** * * * *** * *
15703243 CTTCATATTTCTGCCCTG-CCAATGCCATTTTC-TGGCTTGTAAATTCATACAATGGTCC-CTTA
740 C--CGGGGATCGGTCGGGTCC----CCCTCTGCGT-GC-TGCCGA-TCCTGC--T-G-CCGC--A
* * * * * * ** * * ** *** ***
15703305 AGCCTTCA-TGTGAAGTTTCATGGTAAGAC-GACTCATTTTTTATTTTTCACG-ATTTTTAATAT
790 A-CCCTCAGTCTG--GTCTGAT-CTTAGACTG--GGA---ATGA--ACTC-CGTATGCCTAAGCC
* * * *** * ** * * **
15703367 AA-GGACCAATACCAGCACCCATCGCAC-ATCATGTGTGAAC-ACCCTCCGGCCCCC
843 AACCGACGAA-A-CA--AGCGGGCGGACGGGC--G-G-GCACTA-CGT-CGG-CCAG
* * ** * * * ** * ** *
15703421 CGA-TCGTCGGAACCCCAATGCCGTCGATC---AGGTTCTCTAATGATGGTGTCCCAACGAAGAA
1 AGAGGCG--GGATGCGCAA-GCCGTGGATCGATAGGGT-GGT-A-GGTGG-GT--TTA-G--GCA
* * * * * * * * * * * ** * *
15703482 GA-ATACAGCA--CCAGCACATGCCCGA-GCCCAGCATGTGCT-G-TCGTAACCCTCGATCCGAT
54 CATCTTCA-TATTTCTGC-CATG-CCAATG-CCA--TTTTTCTGGCTTGTAA-ATTC-ATACAAT
* * *** * * * * * * *** * * * *
15703541 CCGAT--CTT-AGACTGGGTATGAA-CTCCGTAT-GCTTAAGTCAACCCACG-GAACGAGTGTGC
111 --GGTCCCTTAAGCCTTCATGTGAAGTTTC--ATGGC--AAGACGA--CTCGTTTTCTATTTTTC
* * * ** * * ** **** ******* * **
15703600 GGGCGCTCAGTCGGAGA-----GA-GGGGCGGGA-TGCGCAAGCCGGGGATCGGCCGG-GTCCCC
168 --ACGAT--TTTTGAAACTTTTTACGGTTCGGGATTTTTTAA-AATTTTTTCAGAAGGAGT----
* * ** * * * * * * *
15703657 CTCTGCGTGCTACCGATCCCATTGCT-GCAACCCTCAATCC-GGTCCGATCTTAGATTGGGAATG
224 -T-T-TG-GC--CCCA-AAC-TTGGTAG--A-CGT-GATCCTTGT---ATTTTTG-TT-GGCATG
* ***** * * * * ***** * * ***
15703720 AAC-TCCGTATGCCTCAGC---CAACTGACGAAACGGGCGAGCGAGCGGGCGGGCACTATGCCAA
272 CACAAAAAAAT---TCAGCTAAAAACT--CG-AA-GTG-TA-CAAGATTTTGTG-ACCATTTGAA
* * * * *** ** * ** * * * * * ***** ** ** * **
15703781 CCAGAGAGGCGGGATGCGCA-AGC-CGTGGATCGATA-GGGTAGTAGGTGGGTTTAGGCACATCT
327 -AAAAGTGTCCCCAT-TTCAGA-CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * ** *** * * * * ** * **** * *
15703843 TCATATTT-CTGCCCTGTCAATGC-C-A-TTTTTCTG-GCTTG-TA--AATTC-ATACAATGGTC
389 GC-TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG--GGATAGGGGGCCAATATAA-GGGC
** * * * ** * ** ******* * *
15703899 C-CTTA--AGC-CTTCATGTGAAGTTTCATGGTAAGACG-ACTCGTTTTCTATTTTTCACGATTT
450 CAAGTACCAGCAC-CCAT-CGCA-CATCAT-GT--G-CGCACAC---CCCCCGGCCCCCCGA-TC
* *** ** * * * ** * ** ***
15703959 TTAATATAAGGACCAATACCAGCAC--CCA---TCGCACATC-ATGTGTGAACACCCCCCGCCCC
504 GT--CGGAA-CCCCAATGCC-GC-CGGTCAGGTTCTC-CGGCGATG-GTG---TCCCGACG-AAG
**** * * * * * * * * * ** * ***
15704018 CCCGATCGTCGGAACC-CCA-ATG-CC-A-TCGATCAGGTTCT--C-TAACGATGGTGTCCCAAC
558 AAAAAT--ACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-GTCCGGTC
*** * * * * * * *
15704075 -GA-AGAAGAATACAGCACCA-GCACATGCCCG-A-GCCTAG-CATGTGCTATCAT-AACCCTCG
620 TGATCTTAGACT--GGGA--ATGAAC-T--CCGTATGCTTAGAC-TG-G-GA--ATGAA--CTCC
* * ** ** * * * * * * ***
15704133 GTCCGAT-CC-GA-TCTTAGACTGGGAATGAAC-TCCGTATGC-CTAAGTCAACCCATTAAACGA
671 GT---ATGCCTAAGTC-AACCCACGAAACGAGCGTGCG--GGCGCTCAG-CCGGCC-----A-GA
* ** ** * ** *
15704193 GCGTGCGGGAGCTCAGTCGGCCAGAGGGGCGGGATGCGTAAGTCAGGGAT--CAATC-GAGCCCC
723 G-GGGCGGGA--T--G-C-G-CA-AGCCG-GGGAT-CG---GTC-GGG-TCCCCCTCTGCGTGCT
* * * * * * * * * ** *
15704255 CCTCTAT-GTGTTGTCG--ATCCTACTGTC-GGAACCCTCGATCTGGTCTGATCTTAGACTGGGA
772 GC-CGATCCTGCTGCCGCAACCCT-CAGTCTGG---TCT-GATCT--T-AGA-CTGGGAAT--GA
* * * * * * *
15704316 A-T--GAACT-CCATATGCTTAAGCCAACCG--ACGAAACGGGCGGGCGGGCGAGCACTACGTCG
825 ACTCCGTA-TGCC-TAAGC-CAA-CCGA-CGAAAC-AAGCGGGCGGACGGGCGGGCACTACGTCG
*
15704375 ACCAG
884 GCCAG
*
15704380 AGAGGCGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15704445 TCTGTCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCATAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * **
15704510 GAAGTTTCATGCCAAGACGACTCGTTTTCCATTTTTCACGATTTTCAAAACTTTTTACGGTTCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * **
15704575 GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCGCCAAACTTTATAGACGTGATCCTTGTAATT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-ATT
*
15704640 TTT-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGA-TTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
15704703 AAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCTAATG
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
15704768 CTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
15704833 ACCAGCAACCACCGCACATCATGTGCGCACACCCCCCCAGCCACCCCCGATCGTCGGAACCCCAA
455 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GGC-CCCCCGATCGTCGGAACCCCAA
* ** ** *
15704898 TGTCGCCGGTCAGGTTCTCCGATGATGGTGTCCCGACGAAGAAAAATGTGGCACCAACACATGCC
517 TGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCC
* * *
15704963 CAAGCCCAGCATGTGCTACCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACGTCGT
582 CGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC--G---G-TC-----C--GG--T---C-T-G-
15705028 ATGCTTAGACTGGGAATGAACGT-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
622 AT-CTTAGACTGGGAATGAAC-TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * *
15705092 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGAGGTGGGATGCGCAAGCCAGGGATCG
685 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
** ** * * *
15705157 ACCGGGTCCCCCTCTATGTGCTGTCGATCCTGCTGCTGCAACCCTCAGTCCGGTCTGATCTTAGA
750 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGA
* * * * *
15705222 CTGGGAATGAACTCCGTATGCCTAAGCTAACCAACGAAACAAGC---AGG-CGGGCGAGCACTAT
815 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGACGGGCGGGCACTAC
* *
15705283 GCCGGCTAG
880 GTCGGCCAG
*
15705292 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15705357 TCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * *
15705422 GAAGTTTAATGGCAAGACGACTCATTTTCTATTTTTCACGA-TTTTCAAATCTTTTTACGGTTCA
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA-CTTTTTACGGTTCG
*
15705486 GGATTTTTTAAAATTTTTTCAGAAGGCA-TTTTGGCCCCAAGCTTGGTAGACGTGATCCTTGTAT
195 GGATTTTTTAAAATTTTTTCAGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
15705550 TTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTT
259 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * * *
15705615 GAAAAAATTGTCCCTATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTATAAAATCTCAAAT
324 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * ** *
15705680 GCTTTTTAAGGGGGTATGAGTTCTCTCGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
389 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* *
15705745 TACCAGCACCCATCGCACATCATGGGCGCACACCCCCCGGCCCTCTCGATCGTCGGAACCCCAAT
454 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC-CCCGATCGTCGGAACCCCAAT
* * ** * ** * *
15705810 GCCGCCAGTCAGGTTCTCCGACGATGGTGTCCTTACGAAGAGAAATGTGGCACCAGCACATACCT
518 GCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCC
** * *
15705875 GAGCCCAGCATGTGCTGCCGCAACCCTTAGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTA
583 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
15705940 TGCTTAGACTGGGAATGAAATCCGTATGCCTAAGTGAACCTACGAAACGAGTGTGCGGGCGCTCA
648 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * ** * * *
15706005 GCCGACCAGAGGGACGGGATGCGCAAGTTGGGGATCGGTCGGGTCCCCCTTTACGTGCTGCTGAT
713 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * ** *
15706070 CCTGCTACGGCGACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
778 CCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * ** * * * *
15706135 AATCAATGAAACAGGCGGGCGGGTGAGCGGACGCTACGCCGGCCAG
843 AACCGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
* * * * * *
15706181 GGAGGCGGGATACGCAAGCCATGGATCGATAGGTTGCTAGGTGGGTTTAGGCATATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
15706246 TCTACCATGCCAATGCCATTTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCATG
66 TCTGCCATGCCAATGCCA-TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG
* *
15706311 TGAAGTTCCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG
130 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG
* *
15706376 AGATTTTTTAAAATTTTTTC---AGGAGTTTTGGCCTCAAACTTGGTAGACGTGATCCTTGTATT
195 GGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
** *
15706438 TTTGTTGGCATGCACAAAAAAATTTTGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * ** *
15706503 AAAAAAGTATCCCCATTTCAGACACTTTAATTGCTACTGATAGCAAACTTGTAAAATCTCAAATG
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
15706568 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCC----
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
15706629 A--AGCACCCGTCCCACATCATGTGCGCACAGCCCCCCGGTGCCCCCCGATCGTCGGAACCCCAA
455 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-G-GCCCCCCGATCGTCGGAACCCCAA
** * *
15706692 TGCCATCGGTCAAGTTCTCCAGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCC
517 TGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCC
* * * * * *
15706757 CGAGCCCAGCATGTGTTGTCACAACCCTCGGTCCAGTCCGATCTTTGACTGGGAATGAACTCCGT
582 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
*
15706822 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTC
647 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* ** * * **
15706887 AGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGTTATCGA
712 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGA
* * ** *
15706952 TCCTGTTGCAGCAACCCTC-GCTCTGGTCCAATCTTAGACTGGGAAAGAACTCCGTATGCCTAAG
777 TCCTGCTGCCGCAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
** ** * *
15707016 CCAACTAACGAAACAAGCGGGCGGGTGGGTGGGCACTACGTCGTCCAG
841 CCAACCGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
* * * * *
15707064 AGAGGCGGGATGCACAAGCGGTGGATCGATAGGCTGGTAGGTGGGTTTAGGCACATCATCATTTT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * * *
15707129 TTTGTCGTGCCAATACCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
*
15707194 AAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * ** *
15707259 GATTTTTCAAAATTTTTTCAAAAGGAGTTTTGGCCCCAAACGTTTTTAGACATGATCCTTGTATT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATT
* * * * *
15707324 TTTGATGGCATGAACAAAAAATTTCAGCCAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
15707389 AAAAAAGTGTCGCCATTTTCAGACACTTTAATGGCTACTTGCAGCAAACCTGTAAAATCTCAAAT
325 AAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
15707454 GCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAG
389 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * *
15707517 TACCAACACCCATCGCACATCATGTGCACACACTCCTCCCCGGCACCCCCCGATCTTCGGAACCC
454 TACCAGCACCCATCGCACATCATGTGCGCACA--CC-CCCCGG--CCCCCCGATCGTCGGAACCC
* * * * ** *
15707582 CAATGCTGCCGGTCAGGTTCTTCGACGGTGGTGTCCCGGTGAAGACAAATACGGCACCAGCACAT
514 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACAT
* * * *
15707647 GCCAGAGCCTAGCATGTGCTGCCGTAACCCTCGGTCCGAT-TGGATCTTAGACTGGGAATGAACT
579 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACT
* *
15707711 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACAAAACGAGCGTGCGGGC
643 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * *
15707776 GCTCAACCGGGCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGAGTGCTG
708 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTG
* * * * *
15707841 CCAATCCTACTACCACAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
773 CCGATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
** ** *
15707906 AAGCCAACCGACGAAACGGGCGGGCGGGTGGGCGGGCACTAAG-CTGGCCAG
838 AAGCCAACCGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTC-GGCCAG
* * * * *
15707957 AGAGGCGGAATGTGCATGCCGTGGATCGATAGGGTGGCAGCTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
15708022 TTTGCCGTGCGAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
**
15708087 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* **
15708152 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGTCCCCAAACTTGGTAGATATGATCCTTGTATTT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
15708217 TTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
261 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
15708282 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCAAACCTGTAAAATCTCAAATGC
326 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
15708347 TCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
391 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * *
15708412 CCAGCACCCATCGTACATCATGTGCGCACACCCCCCGGTCCCCCCCATTGCCGGAACCCTAATGC
456 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGC
* * * * * *
15708477 CGTCGGTTAGGTTCTCTGGTGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGACAGA
520 CGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGA
** * * * * **
15708542 GCCCAGCATGTGCTATCGCAAACCTTGGTTCGGTTTGATCTTAGGTTGGGAATGAACTCCGTATG
585 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
15708607 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCAGC
650 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
15708672 CGGCCAGAGGGGTGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTACGTGCTACCGATCC
715 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
15708737 TACTGCCACAACCCTCAATCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
780 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * * * *
15708802 CCAATGAAACGGGTGGGCGGGCGGGCGAGCACTACATCGGCTAG
845 CCGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
* * *
15708846 AGAGG-GGGATGCGCAATCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCACACT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15708910 TCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * *
15708975 GAAGTTTCATGGCAAGACGAC-CTGTTTTCTATTTTTGACAATTTTTGAAACTTTTTACGGTTTG
131 GAAGTTTCATGGCAAGACGACTC-GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG
* * * *
15709039 GGA-TTTTTAAAATTTTTTCAGAGGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGAATC
195 GGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
*
15709103 TTTATTGGCATGCACAAAAAAATTCAGCTAAAAACT---AGTGTACAAGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
15709165 AAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
15709230 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGT
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * ** *
15709295 ACTAGCACCCATCACACATCATGTGCGCACACCCCCCGACCCCCTCGATCCCCGAAACCCCAATG
455 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC-CGATCGTCGGAACCCCAATG
*
15709360 CCGCCCGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAA-A-GTGCCACCAGCACAT-CC
519 CCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACG-G-CACCAGCACATGCC
* **
15709422 TCGAGCCCAGCATGTGCTGGCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATG-A-----
582 -CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * ** *
15709481 -A--C-T----T-----TG-A------ATGCCTAAGCCAACCGACGAAAAAAGCGAGCGGGCGCT
646 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* *
15709526 CAGCCGGCCCA-AGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACC
711 CAGCCGG-CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCC
* * ** * * * ** *
15709590 GATCCTGATGCTGCAACCCTTGGTCCGGTCTGATCTTAGACTGGAAATGAATTTTGAATGCCTAA
775 GATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *
15709655 GCCAAACGACGAAAAGAGCGAGCGGGCGGACGGGCGGGCGGGCACTACG-CTGGTCAG
840 GCCAACCGACG--AA-A-CAAGCGGGCGGA----CGGGCGGGCACTACGTC-GGCCAG
*
15709712 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTACGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
** * * *
15709777 TGAGTCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGCTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* *
15709842 GAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* *
15709907 GATTTTTTAAAATTGTTTTC-GAAGGATTTTTGGCCCCAAACTTGGTAGACCTGATCCTTGTATT
196 GATTTTTTAAAATT-TTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
15709971 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* ** *
15710036 AAAAAAGTGTCCCCATTTCAGATACTTTAATGGCTACTTACAGCAAACCTGTAAAATCTGAAATG
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
15710101 CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * ** * *
15710166 ACCAGCAGCCATCGTACATCATGTCCGCACATCCCCCGCCCCCCCCCGATCGTCGGAATCCGAAT
455 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGCCCCCCGATCGTCGGAACCCCAAT
* * * * *
15710231 ACCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAACAAAAATAAGGCACCAGCACATGCCC
518 GCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCC
* * * * *
15710296 AAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGATCTAATCTTAGACTGGGAATGAACTCCGTA
583 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
15710361 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACTCATGAAACGAGCGTACGGGCGCTCA
648 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * *
15710426 GCCGGCCAGAGGGGTGCGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGAT
713 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGAT
* * ** * * * *
15710491 CCTACTGTCGCAACCCTTGGTCCGGTCTGAACTTAGACTAGGAATGAACTCCGTATGTCTAAGCC
778 CCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
15710556 AACCGATGAAACGATCGGGCTGG-CGGGCGAGCACTACGTCGGCCAG
843 AACCGACGAAACAAGCGGGC-GGACGGGCGGGCACTACGTCGGCCAG
* *
15710602 AGAGGCGGGATGCTCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCGTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15710667 TCTCCCATGTCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * *
15710732 GAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCAG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* *
15710797 GATTTTTTAACATTTTTTCAGAAGGA-TTTTAGGCCCCAAACTTGGTAGATGTGATCCTTGTATT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTT-GGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * *
15710861 TTTTTTGGCATGCATAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
15710926 AAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATG
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
15710991 CTCTTTAAGAGGGTGTGACTTCTCGAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGT
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * * *
15711056 GCCAGCACCCATCGCACATCATGCGCGCACAACCCCTCGACCCCCCCGATCGAT-GGAGCCCTAA
455 ACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCG-GCCCCCCGATCG-TCGGAACCCCAA
* * *
15711120 TGCCGCCGGTCAGGTTCT---TCGA--------CGATGAAGAAAAATACGACACCAGCACATGCC
517 TGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCC
* *
15711174 CGAGCCTAGCATGTGCTGCCGCAA----C---CC--AC-GATC-----C-----A-G---TCCG-
582 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
15711214 AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
647 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
** * * * * *
15711278 AGTAGGCCAGAGGGGCGGGATGCGCAAGTCGGCGATC-GACTGGGTCCCCCTCTGTGTGCTGCTG
712 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCG
* *
15711342 ATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
776 ATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* ** * * *
15711407 CCAACCGACAAAATGAGCGAGCGGACGGGTGGGCACTACGTCGGGCAG
841 CCAACCGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
* * *
15711455 AGAGGCGGGATTCGCAAGCCGTGGATCAATAGGGCGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* **
15711520 TCTACTGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* ** *
15711585 GAAGTTTGATGGCAAGACGACTCGTTTTCTATTTTTCTTGATTTTTGAAACTTTTTACTGTTCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
**
15711650 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTATTAGACGTGATCCTTGTATTT
196 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
15711715 TTG-TGGCATGCACAAAAAAATTCAGCTAAAAAATTGAAGTGTACAAGACTTTGTGACCATTTGA
261 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
15711779 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
326 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
15711844 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATGAGGGCCAAGTA
391 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
15711909 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGTTCCCCCCCATCGTCGGAACCCTAA
456 CCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGG--CCCCCCGATCGTCGGAACCCCAA
* * *
15711974 TGCCGCTGGTCAGGTTCTCCCGCGATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCC
517 TGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCC
* * * * *
15712039 CGAGCCCAGCATGTACT-ACGTAACCCTCGGTGCGGTCCGATCTTAGACTGGGAATGAACTCCGT
582 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
*
15712103 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAAC-AGGCGTGCGGGCGCT
647 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA-GCGTGCGGGCGCT
* * * * * *
15712167 CAGCCGTCCAAAGGGGCGGGATGTGCAAGCCAGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCG
711 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCG
* * * * *
15712232 ATCCTGCTACGGCAACCCTCATTCCGGTCTGATGTTAGACTGGGAATGAACTCCGTATGCCTAAG
776 ATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
15712297 CCAACCGATG--A-AA-CGGGCGG-C-GGCGGGCTATTACG-CGGTCGG
841 CCAACCGACGAAACAAGCGGGCGGACGGGCGGGC-ACTACGTCGGCCAG
*
15712339 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTCGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * *
15712404 TCTACCGTGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATCT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
*
15712469 GAAGTTTCAT-GCAAGACGACTCGTTTTCTATCTTTCACGA-TTTTGAAAC-TTTTACGCGTTCG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACG-GTTCG
* * **
15712531 AGATTTTTTTAAA-TTTTTCAGAA-GAGTTTTGGCAACAAACTTGGTAGACGTGATCCTTGTATT
195 GGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * ** *
15712594 TTTGTTGGCATGCACAAAAAAATTAAGCTAAAAACTCAAAGTCAACAGGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
15712659 AAAAAAGTGTCCCTATTTCAGACACTTTAAT-GCTTACTGGAAGCAAACCTGTAAAATCACAAAT
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGC-TACTGGCAGCAAACCTGTAAAATCTCAAAT
* * * * *
15712723 GCCCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATAGGGGGCCAAAATAAGGGCTAAG
389 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * * *
15712788 TACCAGCACCCATCGCACAACAAGTTCGCACACCCCCCGGTCCCCCC-ATCGCCGGAACCTCAAT
454 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAAT
* * * *
15712852 GCCGCCGGTCAGGTTATCCGGCAATGGTGTCCCAACGAA-AAAAATGCGGCACCAGCACATGCCC
518 GCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCC
* * * * * * *
15712916 AAGCCCAGCATGTGCTGCTGGAACCCTCGGTCCGGTCCGATCTTAGATTGGGAATGAACTCTGTT
583 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* *
15712981 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTTA
648 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* ** * * * * * *
15713046 GCTGGCCAGAGGGGTAGGATGAGCAAGTCGGGGATCGATCGGGTCCCCCTCTGTGTGCTACTGAT
713 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGAT
* ** *
15713111 CCTGCTGCCGCAACCCTCGGTCCT-GTCCCATCTTAGACTGGGAATGAACTACGTATGCCTAAGC
778 CCTGCTGCCGCAACCCTCAGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
** * *
15713175 CAACCGACGAAACGGGTGGGCAGGCGGACGGGCAGGCGGGCACTACGCCGGCCAG
842 CAACCGACGAAAC----AAGCGGGCGGAC--G--GGCGGGCACTACGTCGGCCAG
* * *
15713230 AGAGGCGGGATGCACAAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
1 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
15713295 TCTGCCGTGCCAATGCCATTTTTCTAGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCATGT
66 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * *
15713360 GAAGTTTGATGGCAAGACTACTCGTTTTTTATTTTTCACGATTTTTGAAA-TTTTTACGGTCCGG
131 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
** * * * * * *
15713424 GA-TTTTTACGATTTCTTTAAGAAGGATTTTTGGCCCCAAACTTGGTAGCCGTGATCTTTTTGTT
196 GATTTTTTAAAATTT-TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * *
15713488 TTTGTTGGCATGCATAAAAAAATTCAGCTAAATACTCAAAGTGTACAAGATTTTGTGACCATTTG
260 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
15713553 AAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATA
325 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
15713618 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGT
390 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
15713683 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCGGCCCCCCTCGATCGTCGGAACCCCAAT
455 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCC-CGATCGTCGGAACCCCAAT
* * * *
15713747 GGCGCCGGTCAGGTTATCCGACAATGGTGTCCC
518 GCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCC
15713780 AACGCAGAGG
Statistics
Matches: 12635, Mismatches: 2269, Indels: 1580
0.77 0.14 0.10
Matches are distributed among these distances:
851 1 0.00
852 211 0.02
853 446 0.04
854 42 0.00
855 4 0.00
857 3 0.00
858 148 0.01
859 4 0.00
860 2 0.00
861 2 0.00
862 181 0.01
863 3 0.00
864 8 0.00
865 47 0.00
866 272 0.02
867 404 0.03
868 168 0.01
869 12 0.00
870 3 0.00
871 178 0.01
872 124 0.01
873 13 0.00
874 13 0.00
875 13 0.00
876 44 0.00
877 269 0.02
878 20 0.00
879 122 0.01
880 837 0.07
881 253 0.02
882 164 0.01
883 442 0.03
884 449 0.04
885 265 0.02
886 146 0.01
887 368 0.03
888 281 0.02
889 1141 0.09
890 1370 0.11
891 257 0.02
892 181 0.01
893 650 0.05
894 431 0.03
895 55 0.00
896 10 0.00
897 323 0.03
898 449 0.04
899 14 0.00
900 4 0.00
901 25 0.00
902 22 0.00
903 24 0.00
904 35 0.00
905 33 0.00
906 18 0.00
907 13 0.00
908 11 0.00
909 10 0.00
910 17 0.00
911 134 0.01
912 321 0.03
913 178 0.01
914 21 0.00
915 41 0.00
916 37 0.00
917 22 0.00
918 23 0.00
919 23 0.00
920 19 0.00
921 26 0.00
922 34 0.00
923 58 0.00
924 59 0.00
925 25 0.00
926 29 0.00
927 28 0.00
928 12 0.00
929 22 0.00
930 18 0.00
931 19 0.00
932 23 0.00
933 5 0.00
934 12 0.00
935 13 0.00
936 20 0.00
937 10 0.00
938 8 0.00
939 12 0.00
940 8 0.00
941 2 0.00
942 10 0.00
943 14 0.00
944 16 0.00
945 16 0.00
946 6 0.00
947 15 0.00
948 10 0.00
949 27 0.00
950 28 0.00
951 24 0.00
952 11 0.00
953 4 0.00
954 5 0.00
955 4 0.00
956 4 0.00
957 18 0.00
958 12 0.00
959 11 0.00
960 8 0.00
961 5 0.00
962 1 0.00
963 2 0.00
964 7 0.00
965 7 0.00
966 9 0.00
967 7 0.00
968 7 0.00
969 5 0.00
970 4 0.00
971 3 0.00
972 2 0.00
973 1 0.00
974 1 0.00
975 4 0.00
976 7 0.00
979 2 0.00
980 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC
GCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCT
GCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTCGGCCAG
Found at i:15705041 original size:26 final size:26
Alignment explanation
Indices: 15705005--15705083 Score: 142
Period size: 26 Copynumber: 3.0 Consensus size: 26
15704995 CTGGTCTGAT
15705005 CTTAGACTGGGAATGAACGTCGTATG
1 CTTAGACTGGGAATGAACGTCGTATG
15705031 CTTAGACTGGGAATGAACGTCGTATG
1 CTTAGACTGGGAATGAACGTCGTATG
15705057 CTTAGACTGGGAATGAAC-TCCGTATG
1 CTTAGACTGGGAATGAACGT-CGTATG
15705083 C
1 C
15705084 CTAAGTCAAC
Statistics
Matches: 52, Mismatches: 0, Indels: 2
0.96 0.00 0.04
Matches are distributed among these distances:
25 1 0.02
26 51 0.98
ACGTcount: A:0.27, C:0.18, G:0.29, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACGTCGTATG
Found at i:15705945 original size:26 final size:26
Alignment explanation
Indices: 15705916--15705968 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15705906 CCAGTCCGAT
*
15705916 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
15705942 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
15705968 C
1 C
15705969 CTAAGTGAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTATG
Found at i:15707721 original size:26 final size:26
Alignment explanation
Indices: 15707692--15707744 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15707682 CCGATTGGAT
15707692 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15707718 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15707744 C
1 C
15707745 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15710373 original size:26 final size:26
Alignment explanation
Indices: 15710337--15710389 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15710327 CTGATCTAAT
15710337 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15710363 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15710389 C
1 C
15710390 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15712109 original size:26 final size:26
Alignment explanation
Indices: 15712080--15712132 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15712070 GCGGTCCGAT
15712080 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15712106 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15712132 C
1 C
15712133 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15714611 original size:26 final size:26
Alignment explanation
Indices: 15714575--15714627 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15714565 TGCATCCGAT
15714575 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
*
15714601 CTTAGACTGGGAATGAAGTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15714627 C
1 C
15714628 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15715628 original size:883 final size:885
Alignment explanation
Indices: 15713784--15718964 Score: 6410
Period size: 882 Copynumber: 5.9 Consensus size: 885
15713774 TGTCCCAACG
* * * * * *
15713784 CAGAGGGGTGGGATGGGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCTTGCTATCAATCCTGCT
1 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTGCT
* * **
15713849 ACCGTAACCCTCGGTCCGGT-TCAATCTTAGA-TAGGGAATTAACTTTGTATGCCTAAGCCAACC
66 ACCGCAACCCTCGGTCCGGTCT-AATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
15713912 GACGAAACGAGCGGGCGGGCGGGCATGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCTGTG
129 GATGAAACGGGCGGGCGGGC-GG---GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
*
15713977 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAATTCTGCCATGCCAATGCCATTTTT
190 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
*
15714042 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCGAGACGACTC
255 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * * * *
15714107 ATTTTCTATATTTCACTATTTTTTAAACTTTTTAAGGTTCGGGATTTTTGAAAATTTTTTAAGAA
320 ATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAA
* * *
15714172 -GAGTTTTAGCCCCAAACTCGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATT
385 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * *
15714236 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTAAGACA
450 CAGCTAAAAACTCGAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
15714301 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAA-AGGGTGTGAGTGCTC
515 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
*
15714365 GAGGTTTGATGAGGGATAGGGGGCCAATATGAGGGCCAAGTACCAGCACCCATCGCACATCATGT
580 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * *
15714430 GCGCACACCCCCCGGTTCCCCCC-ATCGCCGGCACCCCAATGTCGCTGGTCAGGTTCTCCGACGA
645 GCGCACACCCCCCGG-CCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACGA
* ** * * *
15714494 TGGTGTCCCGACGAAGAAAAATATGGCACAAGCACATGCCCGAGCCCAGCATGTACTACCGCAAC
709 TGGTGTCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * * *
15714559 CCTCGGTGC-ATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAAGTCTG
774 CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
*
15714623 TATGCCTAAGTCAACCCACGAAACGGGCGTGCGGGCGCTCAGCCGGC
839 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * *
15714670 CAGAGGGGCGGGATGTGTAAGCCAGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGCT
1 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTGCT
* * * * *
15714735 A-CGTCAACCCTCGTTTCGGTCTGATGTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCG
66 ACCG-CAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * *
15714799 ATGAAACGGGCGGGCGGGCGGGCACTACGCCGGTCGGGGAGGCGGGTTGCGCAAGCCATGGATCG
130 ATGAAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
15714864 ATAGGGTGGTAGGTGGGTTTCGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGC
195 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* *
15714929 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATTTGAAGTTTCATGGCAAGACGACTCGTTTT
260 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTT
* * *
15714994 CTATCTTTCACGATTTTTGAAACTTTTTACAGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAGT
325 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGT
** * *
15715059 TTTGGCAGCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTAAGCT
390 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* * *
15715124 AAAAACTCAAAGTCAACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTA
455 AAAAACTCGAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
** * *
15715189 ATGTTTACTGACAGCAAACCTGTAAAATCTCAAATGCCCTTTAAGGGGGTGTGAGTTCTCGAGGT
520 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * * *
15715254 TTGATGAGGGATAGGGGGCCAAAATAAGGGACAAGTACTAGCACCCATCGCACATCATGTTCGCA
585 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * * *** *
15715319 CACCCCCCGGTCCCCCC-ATCGCCGGAACCACAATGCCGCCGGTCAGGTTATCCGGTAATTGTGT
650 CACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACGATGGTGT
* * * *
15715383 CCCAACGAA-AAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGGAACCCTCAG
715 CCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * *
15715447 TCCGGTCCGATCTTAGACTGGGAATCAACTCCATTTGCTTAGACTGGGAATGAACTCCGTATGCC
780 TCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
*
15715512 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGGC
845 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * *
15715553 CAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTATGTGCTACCGATCCTGCT
1 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTGCT
**
15715618 ACCGCAACCCTCGGTCCGGTCCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAG----CC--
66 ACCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* *
15715677 ----A---GC--G-AGGCGGG-A-T------G-C----A--C---AT------GTCGTGGATCGA
131 TGAAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
*
15715708 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCT
196 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
* * * * *
15715773 TGTAAATTAATACAATGGTCCCTTAAGCTTTCATGTGAAGTTTCACGGCTAGACGACTCATTTTT
261 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTC
* ** * *
15715838 TATTTTTCACGATTTTTGAAA-TTTTTACGGTTCGGGA-TTTTTACGATTTGTTTAAGAAGGATT
326 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTT-TTTCAGAAGGAGT
* * * * *
15715901 TTTGACCCCAAACTTGGTAGCCGTGATCCTTTTGTTTTTGTTGGCATGCACAAAAAAATTCAGCA
390 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* * * ** * *
15715966 AAAAACTCGAAGTGTACAAGATTTTGTGACCTTTTTAAAAACCTGTCCACATTTCAAACACTTTA
455 AAAAACTCGAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* *
15716031 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGCGAGTTCTCGAGGT
520 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * *
15716096 TTGATGAGGGATAGCGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGGACATCATGTGCGCA
585 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
** * * * *
15716161 CA-CCCCTAG-CCCCCCGATCGTCGGAACCCCAATGTCGCTGGTCAGGTTCTCTGGCGATGGCGT
650 CACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACGATGGTGT
* ** ** * * * * *
15716224 CCCGATAAAGAAAAATATGGCACCAGCACATGCTCGGGCCCAGCATATGCTGCCGTAA-GCT---
715 CCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
*
15716285 T----T--GGTC-----C-----A-G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCC
780 TCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
15716328 TAAGTCAACCCATGAAACGAGCATACGGGCGCTCAACCGAC
845 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
** * * **
15716369 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTACCCCTCTACATGCTATCGATCCTATT
1 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTGCT
* * ** * * *
15716434 GCCACAACCCTCTATCCAGTCTAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCGACCGA
66 ACCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * *
15716499 TGAAACGAGCGGGCGGGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTG
131 TG-AA--A-CGGGCGGGC----GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
15716564 TGGATC-ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAAGACAATGCCATTT
188 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * * * *
15716628 TTCTGGCTTGTAAATTAATACAATGGTCTCTTATGCCTTCATGTGAAGTTTCATCGCGAGACGAC
253 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
*
15716693 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTCTT-A
318 TCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT-TTCA
* *
15716757 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAACA
382 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
15716822 ATTCAACTAAAAACTCAAAGTGC-ACAAGATTTTGTGACCATTTGAAAAAAGT-CCCCTCATTTC
447 ATTCAGCTAAAAACTCGAAGT-CTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC-CATTTC
*
15716885 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAG
510 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
**
15716950 TTCTCGAGGTTTGATGAGGGATA-GGGGAAAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
575 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* **
15717014 CATGTGCGCACACCCCCCCGGCCCCCCCGATCATCGGAACCCCAATGTCG-TTGTCAGGTTCTCC
640 CATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCC
* * * * *
15717078 GATGATGGTGTCCCGACGAAGAAAAATACGGTACCAGCACATGCCCGAGCCCAGCATGTGCTACC
704 GACGATGGTGTCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * *
15717143 GTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAATCCGTACGCTTAGACTGGGAATGAA
769 GCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * * *
15717208 CTCCGTATGCCCAAGTGAACCAATGGAACGAGCGTGCGGGCACTCAGCCGGC
834 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * * * *
15717260 CAAAGTGGCAGAATGCGCAAGTCAGGGATCGACCGGGTCCCCCTCTACGTGCTATCGATCCTGCA
1 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTGCT
* * * *
15717325 ACCGCAACCTTCGATCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
66 ACCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * *
15717390 TCAAATGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGGGGGACGCGCAAGCCGTGGA
131 T-GAA--A-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
* *
15717455 TCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTT
192 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
* * * *
15717520 GGCTTGTACATTCGTACAATGGTCCCTTACGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
257 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCAT
15717585 TTTCTATTTTTCACGATTTTTGAAA-TTTTTACGGTTCGAGATTTTTTAAAA-TTTTTCAGAAGG
322 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGG
* *
15717648 AGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTA
387 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* * * *
15717713 GCTAAAAAATCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCAAACACT
452 GCTAAAAACTCGAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
15717778 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAA
517 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
15717843 GGTTTGATGAGGGATAAGGGGCCAACATAAGGGCTAAGTACCAGCACCCATCGCACATCATGTGC
582 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * * *
15717908 GTACACCCCCCGCCCCCCCCGGATCGTTGGAACCCGAATTTTGTCGGTCAGGTTCT-C--CGA--
647 GCACACCCCCCGGCCCCCCC-GATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACGATG
* *
15717968 ------C-A--AAGAAAAATGCGACACCAGTACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
711 GTGTCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
*
15718024 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTG
776 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* ** * * *
15718089 TGCCTAAATCAACCCACGAAACGAGCGTGCATGCGCTTAACCGGT
841 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * ** *
15718134 CAGAGGGGCGAGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTTTACAAGCTACCGATCCTGCT
1 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTGCT
* * * * * * ** *
15718199 GCCGCAACCCTTGGTCCGATCTGATCTTATACTAGGAATGAACTTTGTATGCCTAGGCCAACCGA
66 ACCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG-
** * *
15718264 CAAAATGAGCGGGTGGGCGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGTATGCGCAA
130 ----ATGA-------AACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* * * * * * *
15718329 GCCGTGGATCAATAGGCTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTACCGTGCCACTACC
184 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
*
15718394 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGATGTTTCATGGCAAGA
249 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * * *
15718459 TGACTTATTTTTTATTTTTCATGATTTTTGAAACTTTTTAGGGTTC-AGGATTTTTTAAAATTTT
314 CGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTT
* *
15718523 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTATTTTTTTTGGCATGCACAA
378 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * *
15718588 AAATATTCAGCTAAAACCTCGAAGTGC-ATAAGATTTTATGACCATTTGAAAAAAGTGTCCCCAT
443 AAAAATTCAGCTAAAAACTCGAAGT-CTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
15718652 TTCAGACACTTTAATGGGTACTGGTAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGTGTGT
507 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
15718717 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCGAGTACCAACACCCATCGCA
572 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * * *
15718782 GATCATGTGCGCACAGCCCCCTCGCCCCCCCCGATCGTTGGAACCCCAATGCCGTCGGTAAGATT
637 CATCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTT
* * * *
15718847 CTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAACATGTGC
700 CTCCGACGATGGTGTCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * *
15718912 TGCAGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGAATGC
765 TGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
15718965 CTAAGCCAAC
Statistics
Matches: 3698, Mismatches: 465, Indels: 251
0.84 0.11 0.06
Matches are distributed among these distances:
816 168 0.05
817 1 0.00
818 3 0.00
820 2 0.00
822 1 0.00
827 1 0.00
829 1 0.00
832 3 0.00
833 2 0.00
834 1 0.00
835 1 0.00
838 1 0.00
840 12 0.00
841 60 0.02
842 296 0.08
843 150 0.04
848 1 0.00
849 2 0.00
852 1 0.00
853 1 0.00
854 1 0.00
855 1 0.00
858 3 0.00
859 1 0.00
863 191 0.05
864 216 0.06
865 88 0.02
866 30 0.01
867 6 0.00
868 1 0.00
869 1 0.00
870 2 0.00
873 2 0.00
874 245 0.07
875 3 0.00
876 1 0.00
877 1 0.00
878 1 0.00
879 4 0.00
880 1 0.00
882 450 0.12
883 435 0.12
884 341 0.09
885 43 0.01
886 350 0.09
887 141 0.04
888 154 0.04
889 4 0.00
890 1 0.00
891 184 0.05
896 1 0.00
897 1 0.00
899 86 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (885 bp):
CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTATCGATCCTGCT
ACCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
TGAAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTC
TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTT
TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
AAAACTCGAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACGATGGTGTC
CCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
CCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
Found at i:15717195 original size:26 final size:26
Alignment explanation
Indices: 15717165--15717214 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15717155 CCGATCCGAT
15717165 CTTAGACTGGGAATGAAATCCGTACG
1 CTTAGACTGGGAATGAAATCCGTACG
*
15717191 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAAATCCGTA
15717215 TGCCCAAGTG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTACG
Found at i:15720530 original size:25 final size:26
Alignment explanation
Indices: 15720502--15720553 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15720492 TCGATCCAAT
15720502 CTTAGACT-GGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15720527 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15720553 C
1 C
15720554 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.29, C:0.21, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15721435 original size:26 final size:26
Alignment explanation
Indices: 15721399--15721448 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
15721389 TGATCTTAGA
*
15721399 CTGGGAATGAACTCCGTATGCCTAGG
1 CTGGGAATGAACTCCATATGCCTAGG
*
15721425 CTGGGAATGAACTTCATATGCCTA
1 CTGGGAATGAACTCCATATGCCTA
15721449 AGTCAATCCA
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.26, C:0.22, G:0.26, T:0.26
Consensus pattern (26 bp):
CTGGGAATGAACTCCATATGCCTAGG
Found at i:15721959 original size:888 final size:888
Alignment explanation
Indices: 15719645--15729411 Score: 12714
Period size: 888 Copynumber: 11.1 Consensus size: 888
15719635 CTGGTCTGAT
* * * *
15719645 CTTAGGCTAGGAATGAACGCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * *
15719710 CAGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGATGGGTCCCCCTCTGTGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCC
* * * * * **
15719775 TGCTACCGCAACCCTCTATCTGGTCTGATCTTAGACTGGGAATGAACTCGGTATGCCTATTCCAA
131 TGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
15719840 CCGACGAAACGA--------ACGGACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCATGCCG
196 CCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
15719897 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCTA-ATCTTCATATTTCTGCCATGCCAATGCCATT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGC-ACATCTTCATATTTCTACCATGCCAATGCCATT
* * *
15719961 TTTTTGGCTCGTAAATTCATACAATGGTTCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * ** * *
15720026 CTCATTTTCTATTTTTCACGATTTTCAAAACCTTTTACGGTTCGAGATTTTCTAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAAATTTTTTCA
* *
15720091 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
15720156 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
15720221 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTTAAGGGGATTTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
15720286 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * *
15720351 TGTGCGCACACCTCCCCCGGCCCCTCTGATCGTCAGAATCCCAATGTCGTCGATCATGTTCTCCG
714 TGTGCGCACACC-CCCCCGGCCCCCCCGATCGTC-GAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * * * *
15720416 GCGATGGTGTCCCGACGAAGAAAAATACAGCGCCAGCACATGCCTGAGCCCAGCATAG-GCTACC
777 ACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT-GTGCTGCC
* * * *
15720480 ACAACCCTCGGTT-CGATCCAATCTTAGACT-GGAATGAACTCCATATG
841 GCAACCCTC-GTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
15720527 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * *** **** *
15720592 CAGCCAGAGGGGCGGGATGCGTAAGCTGAGGATTGGC-GAGAGGGGCAGGATGCATGCTACCGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTG-G-GTCCCCCTCTGCGTGCTACCGAT
* * ** * * *
15720656 CTTACTGCCACAACCCTC-AGTTCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAAC
129 CCTGCTGCTGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * *
15720720 CAACCGATTGAAAGGAACGGGCGGGCGGGCGGGTACTACACCGGCCAGAGAGGCGGGGTGCGCAA
193 CAACCGA-AGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
*
15720785 GCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* *
15720850 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGAGAAGCTTT-ATGGCAAG
322 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAG-TTTCATGGCAAG
*
15720914 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTT-AAATATT
386 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAAT-TT
15720978 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
449 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
15721043 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
15721108 TTAAGGCACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
15721173 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGAA
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * *
15721238 TATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGTAACCCCAATGTCGTCGGTCAGGTTC
709 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCG-AACCCCAATGCCGCCGGTCAGGTTC
* ** * ** ** * *
15721303 TCTGGTGATGGTGTCTCGACAAAGAAAAATGTAGCACCAGCACATGCCTGAGCCTAGCATGTGCT
773 TCCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * *
15721368 GCCGCAACCCTCATTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
838 GCCGCAACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * * * * *
15721419 CCTAGGCTGGGAATGAACTTCATATGCCTAAGTCAATCCATGAAATGCGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * *
15721484 CGGTC-GAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCTCTCTACGTGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCC
** * *
15721548 TGCTAATGGAATCCT-GATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * *
15721612 TAGAAGAAACGAGCAGGCGGGCGGGTGGGCACTACGCCGGTCAGAGAGGCGGGATGCGCAAGCTG
196 CCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
15721677 TGGATTGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
*
15721742 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
15721807 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGCTTTTTTTAAATTTTTTCAG
391 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCAG
* ** * *
15721872 AAGCAGTTTTGGCCCCAAACTTTTTAGATGTGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
15721937 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTGAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
15722002 CACTTTAATGGCAACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
15722067 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * * *
15722132 GTGCGCACA-CCCCTCAGCCCCCCCGATCGCCGCAAACCCAATGCCGCCGGTGAGATTCTCTGAT
715 GTGCGCACACCCCCCCGGCCCCCCCGATCGTCG-AACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * * *
15722196 GATGGTGTCCCGGTGAAGAAAAGTGCGGCACCGGCACATGCCCGAGCCCAGCATGTGCTACCGCA
779 GATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* ** * ** * *
15722261 ACCCTCGCTCCAATCCGATCTTATACTAAGAATGAAATTCGTATG
844 ACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15722306 CTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * * * *
15722371 CGGCCAGAGGGGTGGGATGCGTAAGCCGAGGATCGACCGGGACCCCGC-C-ACGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCC-CTCTGCGTGCTACCGATC
* * * * ** * *
15722434 CTACTGCCGCAACCTTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCATCTGCCTAAGCCA
130 CTGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
15722499 ACCGACGAAACGACCAGACGGGCGGGCGGGCACTAAGCCGGCCAGAGAGGCGGGATGCACAAGCC
195 ACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
** * *
15722564 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGTGCATCTTCATATTTTTGCCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATT
* *
15722629 TTTCTGCCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
15722694 CTTGTTTTTTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCA
* ** ** *
15722759 GAAGGATTTTTGGTGCCAAACTTTATAGACGTGATCCTTGTATTTTGGTTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
15722824 ATTCAGGC-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
519 ATTCA-GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
15722888 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* ***
15722953 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTTGTCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
15723018 ATGTGCGCACACCTCCCCCCCGGCCTCCCTGATCGTCAGAACCTCAATACTGCCGGTAAGGTTCT
713 ATGTGCGCACA---CCCCCCCGGCCCCCCCGATCGTC-GAACCCCAATGCCGCCGGTCAGGTTCT
** * * *
15723083 CCGGTGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCATCATGTCCTG
774 CCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * *
15723148 CAGCAACCCTCAG-TCTGGTTCGATCTTAGACTGGGAATGAACTCTGTATG
839 CCGCAACCCTC-GTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15723198 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCCTGCAGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * *
15723263 CGGCCAGAGGGGCGGGATAG-GCAAGCCTGGTATC-GATCGGGTCCCCCTCTGGGTGTTGCCGAT
66 CGGCCAGAGGGGCGGGAT-GCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCGTGCTACCGAT
* * * * *
15723326 CCTGCTGCTGCAACCCTCTATCTGGT-TCAATCTTAGACTGGGAATAAACTCCGTAGGCCTAAGC
129 CCTGCTGCTGCAACCCTCGATCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
15723390 CAACCGATGAAACGAGTGTGCGGGCAGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAG
193 CAACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
*
15723455 CCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCA
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCA
*
15723520 TATTTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGACAAGA
323 T-TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * * *
15723584 CGGCTTGTTTTCTATTTTTCATGATTTTCGAAAATTTTTACAGTTCGAGATTTTTTAAAATTTTT
387 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAAATTTTT
*
15723649 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAA
451 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
15723714 ACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCTCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
15723779 CGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
15723844 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* ** *
15723909 TCATGTGCGCACACCCCCCTCGACCCCGCCTAATCGTCGTAACCCCAATGCTGCCGGTCAGGTTC
711 TCATGTGCGCACACCCCCC-CGGCCCC-CCCGATCGTCG-AACCCCAATGCCGCCGGTCAGGTTC
* * **
15723974 TCTGACGATGGTGTCCCGACGAAGAAAAATGCTACACCAGCACATGCCCGAGCCCAGCATGTGCT
773 TCCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * *
15724039 GCCGTAACCCTCGGTCCGATCCGATCTTAGACTTTGGG-ATGAACTTCGTATG
838 GCCGCAACCCTCGTTCCGGTCCGATCTTAGAC--TGGGAATGAACTCCGTATG
* *
15724091 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCTTGCGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * * *
15724156 CGGCCAGAGGGACGGGATACGCAAGCCGAGGATCGG-TCAGGTCTCCCTCTACGTACTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCGTGCTACCGATC
* * * *
15724220 CTGCTACTGGAATCCTCGATCCGGTGTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * *
15724285 TCCGAAGAAAAGAACGGGCGGACGGGTGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCT
195 ACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
15724350 GTCGATCGATAGGGTGGTCGATGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATT
*
15724415 TTTCTGGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
15724480 CTCGTTTTCTATTTTTCATGATTTTTGAAAGTTTTTACGGTTCAGGCTTTTTTTAAATTTTTTCA
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCA
** * * * *
15724545 GAAGGAGTTTTGGCCCCAAACTTTTTAGACGTGACCCTTGTATTTTTTTTGGCAAGCCCAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
15724610 ATTTAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
**
15724675 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAACTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
15724740 CTAG-GGTTTGATGAGGGATGGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
15724804 TGTGCGCACA--CCCCCTGCCCCCCCGATCGCTGGAACCCTAATGCCGTCAGTCAAGTTCT-C--
714 TGTGCGCACACCCCCCCGGCCCCCCCGATCG-TCGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* *
15724864 C----G-G---C---GAAGAAAAATCCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGC
778 CGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * *
15724918 AACCCTCGATCCGGTTCGATCTTAGACTTTGGAATGAACTCCGTATG
843 AACCCTCGTTCCGGTCCGATCTTAGAC-TGGGAATGAACTCCGTATG
* * ** * * * *
15724965 ATTAGACTGTGAATGAACTTTGTATCCCTAAGTCAACCCACGAAACAAGCGTGTGGGCACTCAG-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * ** * *
15725029 CTGGCGAGAGGGGCGAGATGCGCAAACCGGGGATTAG-TCGGGTCCCCCTTTGCTTGCTACCGAT
66 C-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCGTGCTACCGAT
* * ** * *
15725093 CCTACTGTTGCAACCCTC-ATTCTAGTTTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGC
129 CCTGCTGCTGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
15725157 CAACCGAAGAAACGAACGGGCGGGTGGGCAGGCACTATGCCAGCCAGAGAGGCGGGATGCGCAAG
193 CAACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* * * *
15725222 CCGTGGATCGATATGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCTAATGCCA
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCA
* *
15725287 TTTTTTTGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
323 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* *
15725352 GACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTT
388 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTT
* *
15725417 CAGAAGGAGTTTTGACCCCAAA-TTGGTAGACGTGATCCTTGTGTTTTT-TTGGCATGCACAAAA
452 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
15725480 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCAATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15725545 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
** * * * *
15725610 TTCTCGAGGTTTGATGAGGGATAACGAGCCAATATAAGAGCCAAGTACTAGTACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * **
15725675 CATGTGCGCATA--------G-CCCCCCGATCGTCAGAACCCCAATGCCACCATTCAGGTTCTCC
712 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * * * *
15725731 GACGATGGTGTCTCGGTGAAGAAAAATGAGGCACCAACACATGCCTGAG-CCAGTATGTGCTACC
776 GACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* ** * * *
15725795 GTAACCCTCGGTT-CAATTCGATCCTAGACTGGGAATCAACTCCGTATG
841 GCAACCCTC-GTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15725843 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * *
15725908 CGGCCAGAGGGGCGGGATGCACAAGTCGGGGAT-GGACCGGGTCCCCCTCTGTGTGCTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG-CTGGGTCCCCCTCTGCGTGCTACCGATC
* * * * * * *
15725972 CTACT-ATCGCAAACCTC-AGTCTGGCCTGATCTTAGACTGGGAATGAACTCTGTATGGCTAAGC
130 CTGCTGCT-GCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * ** * * * * *
15726035 CTATCGACGAAACGAGCAGGCGGGCAAGCGGGCACTACGTCGGTCAGAGAGCCGAGATGCCCAAG
193 CAACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* *
15726100 CCGGGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCA
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCA
**
15726165 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGTT
323 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
*
15726230 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAGGGTTTCGGATTTTTTAAAATTTTTT
388 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TTCGGATTTTTTAAAATTTTTT
** * * *
15726295 CAGATCGAGTTTTGGCCCCAAACTCGGTAGACGTGATCCTTATATTTTTGTTGGCATGCACAAAG
452 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
15726360 AAATTCAGCAAAAAATTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15726424 AGACACTTTAATGGCTAATGGCAGCAATCCTATAAAATCTCAAATGCTCTTTAA-GGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15726488 TTCTCAAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
15726553 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCACCGGTCATGTTCTCC
712 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCG-AACCCCAATGCCGCCGGTCAGGTTCTCC
* * ** *
15726618 GATGATGGTGTCTCGGGGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACC
776 GACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * * *
15726683 GCAACCCTTGGTCCGGTCCAATCTTAGAGTGGGAATGAACTCTGTATG
841 GCAACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
15726731 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACAAACGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * * *
15726796 CAGCCA-AGGGGCGGGATGCGCAAGCCAGGGATCGGTCT-TGTCCCCCTCTGTGGGGTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG-CTGGGTCCCCCTCTGCGTGCTACCGATC
* * * * * *
15726859 CTGTTGCCGCAACCATCGGTCCGGTCTAATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** * * *
15726924 ACCGATGAAATGAGCGGGCGGGCGAGCAAGCACTACGCCGGTCAGAGAGCCGGGATGCGCAAGTC
195 ACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
15726989 ATGGATCAATAGGGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTACCAT-CCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATT
* *
15727053 TTTATGGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * * * *
15727118 CTCATTTTCTATTTTTCATAATTTTTTAAACTTTTTAGGGTTCCGGATTTTTAAAAATTTTTTCG
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT-CGGATTTTTTAAAATTTTTTCA
* * * *
15727183 GAAAGAGTTTTGGCCCCAAACTTGGTAGCCATGATCCTTGTATTTTTGTTGGCATGCACAAAAAT
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
15727248 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCA
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCA
15727313 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
15727378 TCTCGAGGTTTGATGAGAGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * ** * *
15727443 ATGTGCGTACA-CCCCCTGGCCCCCCTCGATCGTCGGAACCGTAATGTCGTCGGTCAGGTTCTCC
713 ATGTGCGCACACCCCCCCGGCCCCCC-CGATCGTC-GAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * *
15727507 GATGATGGTGTCCC-AGTGAGGAAAAATACGACACCAGCACATGCCCGAG-CCAGCAT-TTCTGC
776 GACGATGGTGTCCCGA-TGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * *
15727569 CGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
840 CGCAACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
15727618 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAACTTACAGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * ** * *
15727683 CGACCAAAGGGACGAGATGCGCAAGCCGGGGATCGACCT-GGTCCCCCTCTATGTACTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG-GCTGGGTCCCCCTCTGCGTGCTACCGATC
* * * * * *
15727747 CTGCTGCTGGAATCCTCGATCCGATCCGATCTTAGACTGAGAATGAACTTCGTATGCCTAAGCCA
130 CTGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
15727812 ACCGAAGAAACGAGCGGGCGGGCGGG-TGGC-C-A-----GCCAAAGAGGCGTGATGCGCAAGCT
195 ACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
*
15727869 GTGGATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATT
*
15727934 TTTCTGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
15727999 CTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGCTTTTTTTAAATTTTTTCA
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCA
* ** * *
15728064 GAAGGAGTTTTGACCCCAAACTTTTTAGACGTGATCCTTGTATTTTTTTTGGCATGCCCAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
15728129 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTTAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
15728194 TCACTTTAATGGCTACTGGCAGCAAACCTGTGAAATCTCAAAAGCTCTTTAA-GGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
15728258 CTCGACGTTTGATGAGGGAT-GGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATC
649 CTCGAGGTTTGATGAGGGATAGGGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
15728322 ATGTGCGCACACACCCCC-GCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
713 ATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * ** *
15728386 GCGATGGTGTCCCGGTGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCG
777 ACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
15728451 TAACCCTCGGTT-CGGTCC-A----A-TCT-----T--A----G-A--
842 CAACCCTC-GTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15728478 CTT----T-GGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCACTCAG-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * *
15728537 CTGGCCAGAGGGGCGGGATGCGCAAACCGGAGATTGG-TCGGGTCCCCCTTTGCGTGCTACCGAT
66 C-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCGTGCTACCGAT
* * *
15728601 CCTGCTGCTGCAACCCTC-ATTCGGGT-TCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAG
129 CCTGCTGCTGCAACCCTCGA-TCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
15728664 CCAATCGAAGAAACGAGCGGGCGGGTGGGTGGGCACTAGGCCGGCCAGAGAGGCGGGATGCGCAA
192 CCAACCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* * * * *
15728729 GCCATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCGTGCCAATGCC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
15728794 ATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
322 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * * *
15728859 TGAATCGTTTCCTATTTTTTATGATTTTTGAAACTTTTTACGGTTCGGGATTTTGTAAAATTTTT
387 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTT
* * * **
15728924 TCAGAAGGAGTTTTGGCCCCAAA-TTGGTAGACGTGATCCTTGTGTTTTTTTTGGTATGTTCAAA
451 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15728988 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
15729053 GAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
15729118 GTTCTTGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * ** *
15729183 TCATGTGCGCACA--------GCCCCCCAGATCGTCAAAACCCCAATGTCGCCATTTAGGTTCTC
711 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GAACCCCAATGCCGCCGGTCAGGTTCTC
* * *
15729240 CGGCGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAG-CCAGCATGTGCTGC
775 CGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * * *
15729304 TGTAACCCTCGGTT-CGGTCCGATCCTAGACTGGGAATCAACTCTGTATG
840 CGCAACCCTC-GTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
15729353 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGCG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
15729412 GGCGGACACT
Statistics
Matches: 7791, Mismatches: 941, Indels: 308
0.86 0.10 0.03
Matches are distributed among these distances:
853 1 0.00
854 2 0.00
855 205 0.03
856 89 0.01
857 1 0.00
858 1 0.00
860 4 0.00
861 2 0.00
862 150 0.02
863 297 0.04
864 5 0.00
865 1 0.00
866 34 0.00
867 3 0.00
868 1 0.00
869 2 0.00
872 141 0.02
873 92 0.01
874 497 0.06
875 4 0.00
877 4 0.00
878 582 0.07
879 210 0.03
880 287 0.04
881 244 0.03
882 96 0.01
883 73 0.01
884 6 0.00
885 4 0.00
886 239 0.03
887 611 0.08
888 1385 0.18
889 214 0.03
890 37 0.00
891 160 0.02
892 956 0.12
893 1140 0.15
894 11 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCC
TGCTGCTGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGAAGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGATTTTTTAAAATTTTTTCAGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCCGGCCCCCCCGATCGTCGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
TGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
CCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:15723201 original size:26 final size:26
Alignment explanation
Indices: 15723172--15723224 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15723162 CTGGTTCGAT
*
15723172 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15723198 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15723224 C
1 C
15723225 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15724114 original size:26 final size:26
Alignment explanation
Indices: 15724064--15724117 Score: 74
Period size: 26 Copynumber: 2.0 Consensus size: 26
15724054 CCGATCCGAT
*
15724064 CTTAGACTTTGGGATGAACTTCGTATG
1 CTTAGAC-TTGGGATGAACTCCGTATG
15724091 CTTAGAC-TGGGAATGAACTCCGTATG
1 CTTAGACTTGGG-ATGAACTCCGTATG
15724117 C
1 C
15724118 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 3
0.86 0.03 0.10
Matches are distributed among these distances:
25 4 0.16
26 14 0.56
27 7 0.28
ACGTcount: A:0.24, C:0.19, G:0.26, T:0.31
Consensus pattern (26 bp):
CTTAGACTTGGGATGAACTCCGTATG
Found at i:15725848 original size:26 final size:26
Alignment explanation
Indices: 15725819--15725869 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15725809 AATTCGATCC
15725819 TAGACTGGGAATCAACTCCGTATGCT
1 TAGACTGGGAATCAACTCCGTATGCT
* *
15725845 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATCAACTCCGTATGC
15725870 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATCAACTCCGTATGCT
Found at i:15726741 original size:26 final size:26
Alignment explanation
Indices: 15726705--15726757 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15726695 CCGGTCCAAT
*
15726705 CTTAGAGTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15726731 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15726757 C
1 C
15726758 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15727621 original size:26 final size:26
Alignment explanation
Indices: 15727592--15727644 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15727582 CTGGTCCGAT
15727592 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15727618 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15727644 C
1 C
15727645 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15729365 original size:26 final size:26
Alignment explanation
Indices: 15729329--15729379 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15729319 GGTCCGATCC
*
15729329 TAGACTGGGAATCAACTCTGTATGCT
1 TAGACTGGGAATCAACTCCGTATGCT
*
15729355 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATCAACTCCGTATGC
15729380 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATCAACTCCGTATGCT
Found at i:15730093 original size:26 final size:26
Alignment explanation
Indices: 15730057--15730109 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15730047 CTGGTCTGAT
* *
15730057 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15730083 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15730109 C
1 C
15730110 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15730156 original size:722 final size:716
Alignment explanation
Indices: 15728632--15730172 Score: 2121
Period size: 721 Copynumber: 2.1 Consensus size: 716
15728622 CGGGTTCAAT
* * * * * * * * * *
15728632 CTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAATCGAAGAAACGAGCGGGCGGGTGGGTGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGGGCGGG-CGGCGGA
*
15728697 CACTAGGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAAGGTGGTAGGTGGGTTTAG
65 CACTA----GGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAAGGTGGTAGGTGCGTTTAG
*
15728762 GCACATCTTCATATTTTTGCCGTGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCC
126 GCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCC
* * * * ** *
15728827 CTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAATCGTTTCCTATTTTTTATGATTTTTGAAA
191 CCTAAGCCATCATGTGAAGTGTCATGGCAAGACGAATCGTTTCCTATTTTTTACAATTTTTAAAA
*
15728892 CTTTTTACGGTTCGGGATTTTGTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAATTGGTAGACG
256 CTTTTTACGGTTCGGGATTTTGTAAAATTTTTTCAGAAGGAGTTTTGGCCCAAAATTGGTAGACG
* * * ** *
15728957 TGATCCTTGTGTTTTTTTTGGTATGTTCAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
321 TGATCCTTGTATTTTTGTTGGCATGTAAAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATT
* *
15729022 TTGTGACCATTTGAAAAAAGTGTCCACATTTGAGACACTTTAATGGCTACTGGCAGCAAACCTGT
386 TTGTGACCAATTGAAAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * **
15729087 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGATTTGATGAGGGATAGGGGGCCAAT
451 AAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCTTAAGATTTGATGAGGGATAGGGGAACAAT
**
15729152 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCCAGATCGTCAAAACC
516 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCCAGATCACCAAAACC
* * * ** * *
15729217 CCAATGTCGCCATTTAGGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCACA
581 ACAATGCCGCCATTCAGGTTCTCCAACGATGGTGTCCCGGTGAAGAAAAATGCGACACCAGCACA
* * * *
15729282 TGCCCGAGCCAGCATGTGCTGCTGTAACCCTCGGTTCGGTCCGATCCTAGACTGGGAATCAACTC
646 TGCCCGACCCAGCATGTGCTACCGCAACCCTCGGTTCGGTCCGATCCTAGACTGGGAATCAACTC
15729347 TGTATG
711 TGTATG
* *
15729353 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGCGGGCGGA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGGGCGGGC-GGCGGA
* * *
15729418 CACTACGCCAGCCAGAGAGGCGGGATGTGCAAGCTA-GAGATCGATAGGGTGGTAGGTGCGTTTA
65 CACTA-G---GCCAGAGAGGCGGGATGCGCAAGCCATG-GATCGATAAGGTGGTAGGTGCGTTTA
*
15729482 GGCACATCTTCATATTTTTTCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTC
125 GGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTC
* *
15729547 CCCTAAGCCATCATGTGAAGTGTCATGGCAAGACGACTCGTTTTCTATTTTTTACAATTTTTAAA
190 CCCTAAGCCATCATGTGAAGTGTCATGGCAAGACGAATCGTTTCCTATTTTTTACAATTTTTAAA
* * *
15729612 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCAAAATTTGGTAGA
255 ACTTTTTACGGTTCGGGATTTTGTAAAATTTTTTCAGAAGGAGTTTTGGCCCAAAA-TTGGTAGA
15729677 CGTGATCCTTGTATTTTTGTTGGCATG-AAAAAAAAGATTCAGCTAAAAACTCAAAGTGTACAAG
319 CGTGATCCTTGTATTTTTGTTGGCATGTAAAAAAAA-ATTCAGCTAAAAACTCAAAGTGTACAAG
* *
15729741 ATTTTGTGACCAATTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGTCTACTGGCAGCAAACC
383 ATTTTGTGACCAATTGAAAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
*
15729806 TGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGAAC
448 TGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCTTAAGATTTGATGAGGGATAGGGGAAC
*
15729871 AATATAAGGGCCAAGTACCCGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCGCCCCA-A
513 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-------GCC-CCCCAGA
**
15729935 TCACCGGAACCACAATGCCGCC-TGTCAGGTTCTCCAACGATGGTGTCCC-GTCGAAGAAAAATG
570 TCACCAAAACCACAATGCCGCCAT-TCAGGTTCTCCAACGATGGTGTCCCGGT-GAAGAAAAATG
** * *
15729998 CGACATTAGCACATGCCCGAACCCAGCATGTGCTACCGCAACCCTCGG-TCTGGTCTGATCTTAG
633 CGACACCAGCACATGCCCG-ACCCAGCATGTGCTACCGCAACCCTCGGTTC-GGTCCGATCCTAG
* *
15730062 ATTGGGAATGAACT-TCGTATG
696 ACTGGGAATCAACTCT-GTATG
* ***
15730083 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGTGCGGGC-GTTTA-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGGGCGGGCGGCGGAC
*
15730146 ACT-GGCCAGAGGGGCGGGATGCGCAAG
66 ACTAGGCCAGAGAGGCGGGATGCGCAAG
15730173 TTGGGGATCG
Statistics
Matches: 728, Mismatches: 72, Indels: 39
0.87 0.09 0.05
Matches are distributed among these distances:
718 2 0.00
720 1 0.00
721 286 0.39
722 247 0.34
725 1 0.00
727 3 0.00
728 5 0.01
729 71 0.10
730 112 0.15
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (716 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGGGCGGGCGGCGGAC
ACTAGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAAGGTGGTAGGTGCGTTTAGGCACA
TCTTCATATTTTTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCCTAA
GCCATCATGTGAAGTGTCATGGCAAGACGAATCGTTTCCTATTTTTTACAATTTTTAAAACTTTT
TACGGTTCGGGATTTTGTAAAATTTTTTCAGAAGGAGTTTTGGCCCAAAATTGGTAGACGTGATC
CTTGTATTTTTGTTGGCATGTAAAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTG
ACCAATTGAAAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
CTCAAATGCTCTTTAAGGGGGAGTGAGTTCTTAAGATTTGATGAGGGATAGGGGAACAATATAAG
GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCCAGATCACCAAAACCACAAT
GCCGCCATTCAGGTTCTCCAACGATGGTGTCCCGGTGAAGAAAAATGCGACACCAGCACATGCCC
GACCCAGCATGTGCTACCGCAACCCTCGGTTCGGTCCGATCCTAGACTGGGAATCAACTCTGTAT
G
Found at i:15730981 original size:26 final size:27
Alignment explanation
Indices: 15730945--15731002 Score: 91
Period size: 26 Copynumber: 2.2 Consensus size: 27
15730935 CTGATCCAAT
*
15730945 CTTAGACTGGGGATGAACTCCGTATG-
1 CTTAGACTGGGAATGAACTCCGTATGC
*
15730971 CTTAGACTGGGAATGAACTTCGTATGC
1 CTTAGACTGGGAATGAACTCCGTATGC
15730998 CTTAG
1 CTTAG
15731003 TCAACCCACG
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
26 24 0.83
27 5 0.17
ACGTcount: A:0.24, C:0.19, G:0.28, T:0.29
Consensus pattern (27 bp):
CTTAGACTGGGAATGAACTCCGTATGC
Found at i:15731534 original size:889 final size:886
Alignment explanation
Indices: 15729353--15731860 Score: 3755
Period size: 888 Copynumber: 2.8 Consensus size: 886
15729343 ACTCTGTATG
* *
15729353 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGCGGGCGGA
1 CTTAGACTGGGAATGAACTCCGTATGCCT-AG-CAACCAACGAAACGAGCGGGCGGGCGGGCGGG
* * * *
15729418 CACTACGCCAGCCAGAGAGGCGGGATGTGCAAGCTA-GAGATCGATAGGGTGGTAGGTGCGTTTA
64 CACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCAATG-GATCGATAGGGTGGTAGGTGGGTTTA
* * *
15729482 GGCACATCTTCATATTTTTTCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTC
128 GGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTACCTTGTAAATTCATACAATGGTC
* * * * *
15729547 CCCTAAGCCATCATGTGAAGTGTCATGGCAAGACGACTCGTTTTCTATTTTTTACAATTTTTAAA
193 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAA
* *
15729612 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCAAAATTTGGTAGA
258 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCAAAACTTGGTAGA
* *
15729677 CGTGATCCTTGTATTTTTGTTGGCATG-AAAAAAAAGATTCAGCTAAAAACTCAAAGTGTACAAG
323 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAG
* *
15729741 ATTTTGTGACCAATTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGTCTACTGGCAGCAAACC
387 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * **
15729806 TGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGAAC
452 TGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCC
* * *
15729871 AATATAAGGGCCAAGTACCCGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCGCCCCAAT
517 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
* * *
15729936 CACCGGAACCACAATGCCGCCTG-TCAGGTTCTCCAACGATGGTGTCCCGTCGAAGAAAAATGCG
582 CACCGGAACCACAATGCCGTC-GATCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATGCG
** * * *
15730000 ACATTAGCACATGCCCGAACCCAGCATGTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGATT
646 ACACCAGCACATGCCCGAACCCAGCATGTGCTGCCACAACCCTCGGTCTGGTCCGATCTTAGATT
*
15730065 GGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACA
711 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACA
* * * * ** *
15730130 AACGTGCGGGCGTTTAACTGGCCAGAGGGGCGGGATGCGCAAGTTGGGGATCGGTCGGTCCCCCT
776 AACATGCGGGCGTTCAACTGGCCAGAGGGGCAGGATACGCAAGCCGAGGATCGGTCGGTCCCCCT
* ** *
15730195 CTGTGTGCTGTCAATCCTACTACCGTAACCCTCGGTTCGATCTGAT
841 CTATGTGCTCCCAATCCTACTACCGTAACCCTCGATTCGATCTGAT
* *
15730241 CTTAGACTAGGAATGAACTCCGTATGCCTACGCCAACCAACGAAATGAGCGGGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTA-G-CAACCAACGAAACGAGCGGGCGGGCGGGCGGG
* * * ** *
15730306 CACTACGCCGGCCAAAAAGGTGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAG
64 CACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCAATGGATCGATAGGGTGGTAGGTGGGTTTAG
** * *
15730371 AAACGTCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCC-TGTAAATTCATACAATGGTC
129 GCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCT-ACCTTGTAAATTCATACAATGGTC
* *
15730435 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
193 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAA
* * **
15730500 ACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCACTCTTGGTAGA
258 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCAAAACTTGGTAGA
* *
15730565 CGTGATCCTTGTATTTTTGTTGTCATGCACAAAATAATTCAGCTAAAAACTCGAAGTGTACAAGA
323 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
15730630 TTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
388 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * * *
15730695 GTAAAATCTCAATTGCTCTTTAAGTGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGGGCCA
453 GTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
* *
15730760 ATATAAGGGCCAAGTACCAGCACCCATTGCACATCATTTGCGCACACCCCCCGGCCCCCCCGATC
518 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC
* * * *
15730825 ACCGGAACCCCAATACCGTCGATCAGGTTCTCCGACGATGGTGACCCGGCGAAGAAAAATACGAC
583 ACCGGAACCACAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATGCGAC
* * * * * *
15730890 ACCAGCACATGCCCGACCCCAGCAAGTGCTGCCACAACCCTCAGTCTGATCCAATCTTAGACTGG
648 ACCAGCACATGCCCGAACCCAGCATGTGCTGCCACAACCCTCGGTCTGGTCCGATCTTAGATTGG
* * * * *
15730955 GGATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTTAGTCAACCCACGAAACGAG
713 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAA
15731020 CATGCGGGCGTTCAACTGGCCAGAGGGGCAGGATACGCAAGCCGAGGATCGGTCGGGTCCCCCTC
778 CATGCGGGCGTTCAACTGGCCAGAGGGGCAGGATACGCAAGCCGAGGATCGGTC-GGTCCCCCTC
* * * * *
15731085 TATGTGCTCCCGATCCTGCTATCGTAACCCTCGATTTGGTCTGAT
842 TATGTGCTCCCAATCCTACTACCGTAACCCTCGATTCGATCTGAT
* * * *
15731130 CTTAGACTGGGAATGAACTCCATATGCCTCAGCGAACCGACGAAACGAGCGGGCTGGCGGGTGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCT-AGC-AACCAACGAAACGAGCGGGCGGGCGGGCGGG
* *
15731195 CACTACGTCGGCTAGAGAGGCGGGATGCGCAAGCAATGGATCGATAGGGTGGTAGGTGGGTTTAG
64 CACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCAATGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
15731260 GCACATCTTTATATTTCTACCATGCCAATGCCATTTTTCTACCTTGTAAATTCAAACAATGGTCC
129 GCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTACCTTGTAAATTCATACAATGGTCC
* * *
15731325 CTTAAACCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAGGATTTTCAAAA
194 CTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAA
* * *
15731390 CTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCTAAACTTGGTAGAC
259 CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCAAAACTTGGTAGAC
*
15731455 GTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGAT
324 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * *
15731520 TTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCAGCAAATCTG
389 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
15731585 TAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
454 TAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
* *
15731650 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCTCCCGATCG
519 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCA
* * * * * * *
15731715 CTGGAACCTCAATGCCGTCGATCAGGTTCTCTGGCGATGGTGTCCCGGGGAAGAAAAATGCGGCC
584 CCGGAACCACAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATGCGACA
* * *
15731780 CCAGGACATGCTCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCTGGTCCGATCTTAGATTGGG
649 CCAGCACATGCCCGAACCCAGCATGTGCTGCCACAACCCTCGGTCTGGTCCGATCTTAGATTGGG
*
15731845 AAAGAACTCCGTATGC
714 AATGAACTCCGTATGC
15731861 CTAAGTCAAC
Statistics
Matches: 1453, Mismatches: 158, Indels: 17
0.89 0.10 0.01
Matches are distributed among these distances:
887 2 0.00
888 736 0.51
889 714 0.49
890 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (886 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAGCAACCAACGAAACGAGCGGGCGGGCGGGCGGGCA
CTACGCCGGCCAGAGAGGCGGGATGCGCAAGCAATGGATCGATAGGGTGGTAGGTGGGTTTAGGC
ACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTACCTTGTAAATTCATACAATGGTCCCT
TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACT
TTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCAAAACTTGGTAGACGT
GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
AAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACC
GGAACCACAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATGCGACACC
AGCACATGCCCGAACCCAGCATGTGCTGCCACAACCCTCGGTCTGGTCCGATCTTAGATTGGGAA
TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACAT
GCGGGCGTTCAACTGGCCAGAGGGGCAGGATACGCAAGCCGAGGATCGGTCGGTCCCCCTCTATG
TGCTCCCAATCCTACTACCGTAACCCTCGATTCGATCTGAT
Found at i:15732108 original size:159 final size:159
Alignment explanation
Indices: 15731813--15732207 Score: 483
Period size: 159 Copynumber: 2.5 Consensus size: 159
15731803 TGTGCTGCCA
* * *
15731813 CAACCCTCGGT-CTGGTCCGATCTTAGATTGGGAAAGAACTCCGTATGCCTAAGTCAACCCACGA
1 CAACCCTCGGTCCT-GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * *
15731877 AACGAGCGTGCGGGCGCTCTGCCGACCAGAGGGGTGGGATACGCAAGCCGGGGATCGGCTGGGCC
65 AACGAGCGTGCGGACGCTCAGCCGACCAGAGGGATGGGATACGCAAGCCGGGCATCGGCTGAGCC
* * * * *
15731942 CCCCTCTTTGTGCTGTCAATCCTGCTACTG
130 CCCCTCTTCGTGCTGCCAACCCTACTACCG
*
15731972 CAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAA
1 CAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * *
15732037 ATGAGCGTGCGGACGCTCAGCCGGA-CAGAGGGATGGGATGCGCAAGCTGGGCATCAGGC-GAGT
66 ACGAGCGTGCGGACGCTCAGCC-GACCAGAGGGATGGGATACGCAAGCCGGGCATC-GGCTGAGC
* * *
15732100 CCCTCTCTTCGTGCTGCCGACCCTACTGCCG
129 CCCCCTCTTCGTGCTGCCAACCCTACTACCG
* * * * *
15732131 CAACCCTCGATCC-GATCTGATCTTAGACTAGGAATGAACTCCGTATGCATAAGCCAACCGACGA
1 CAACCCTCGGTCCTG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
*
15732195 AACGAGCGGGCGG
65 AACGAGCGTGCGG
15732208 GCGGGCGGGC
Statistics
Matches: 203, Mismatches: 29, Indels: 8
0.85 0.12 0.03
Matches are distributed among these distances:
158 1 0.00
159 195 0.96
160 7 0.03
ACGTcount: A:0.22, C:0.30, G:0.29, T:0.19
Consensus pattern (159 bp):
CAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
ACGAGCGTGCGGACGCTCAGCCGACCAGAGGGATGGGATACGCAAGCCGGGCATCGGCTGAGCCC
CCCTCTTCGTGCTGCCAACCCTACTACCG
Found at i:15733183 original size:185 final size:185
Alignment explanation
Indices: 15732856--15733226 Score: 431
Period size: 185 Copynumber: 2.0 Consensus size: 185
15732846 CTGGTCTGAT
* * * * *
15732856 CTTAGATTGGGAATGAACTTCGTATGTCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGACGCTCAGC
* * * * * * ** * * *
15732921 CGACCAGAGGGGTGGGATACGCAAGTTGGGAATCGGCCGGGCCCCCCTTTTTGTGCTGTCGATCT
66 CGACCAGAGAGGCGAGATACGCAAGCTGGGAATCGGCCGAGCCCCCCTCTGCGTGCTGCCGACCC
* ** * *
15732986 TGCTGTCGTAACCCTCGATCCGATCTAATCTTAGACTGGGAATGAACTCCATATG
131 TACTACCGTAACCCTCGATCCGATCTAATCTTAGACTAGGAATGAACACCATATG
*
15733041 CTTAGACTGGGAATGAAC-TCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGACGCTCAG
1 CTTAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGACGCTCAG
* * * *
15733105 CCGGCTAGAGAGGCGAGATGCGCAAGCTGAGG-ATCGGCCGAGTCCCCCTCTGCGTGCTGCCGAC
65 CCGACCAGAGAGGCGAGATACGCAAGCTG-GGAATCGGCCGAGCCCCCCTCTGCGTGCTGCCGAC
* * * * *
15733169 CCTACTACCGTAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACACCGTATG
129 CCTACTACCGTAACCCTCGATCCGATCTAATCTTAGACTAGGAATGAACACCATATG
15733226 C
1 C
15733227 GTAAGCCAAC
Statistics
Matches: 153, Mismatches: 31, Indels: 4
0.81 0.16 0.02
Matches are distributed among these distances:
184 2 0.01
185 149 0.97
186 2 0.01
ACGTcount: A:0.23, C:0.27, G:0.28, T:0.22
Consensus pattern (185 bp):
CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGACGCTCAGC
CGACCAGAGAGGCGAGATACGCAAGCTGGGAATCGGCCGAGCCCCCCTCTGCGTGCTGCCGACCC
TACTACCGTAACCCTCGATCCGATCTAATCTTAGACTAGGAATGAACACCATATG
Found at i:15733947 original size:26 final size:26
Alignment explanation
Indices: 15733909--15733961 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15733899 CCGGTTCGAT
* *
15733909 CTTAGACTTGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15733935 CTTAGACTGGGAATGTACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15733961 C
1 C
15733962 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.19, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15734993 original size:26 final size:26
Alignment explanation
Indices: 15734956--15735008 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15734946 CCGGTCCGAT
* *
15734956 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACGGGGAATGAACTCTGTATG
15734982 CTTAGACGGGGAATGAACTCTGTATG
1 CTTAGACGGGGAATGAACTCTGTATG
15735008 C
1 C
15735009 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.15, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACGGGGAATGAACTCTGTATG
Found at i:15735126 original size:185 final size:185
Alignment explanation
Indices: 15734805--15735159 Score: 462
Period size: 185 Copynumber: 1.9 Consensus size: 185
15734795 ATCTCAGATT
* * *
15734805 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGCGCTCAGTCGGCCAGA
1 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACAGACGCTCAGCCGGCCAGA
* * * * ** * * * * *
15734870 GGGGTGGGTTACGCAAGCCGGGGATCGGTCGGGCCCCCTTCTTTATGCTGTCGATCCTGCTGCCG
66 GGGGCGGGATACACAAGCCGGGGATCGGCCGGGCCCCCTTCTGCATGCTGCCGACCCTACTACCA
*
15734935 CAACCCTCGATCCG-GTCCGATCTTAGACTGGGAATGAACTTTGTATGCTTAGACG
131 CAACCCTCGAT-CGAGTCCGATCTTAGACTAGGAATGAACTTTGTATGCTTAGACG
* * *
15734990 GGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAATGAGCGTGCAGACGCTCAGCCGGCCAGA
1 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACAGACGCTCAGCCGGCCAGA
* * * *
15735055 GGGGCGGGATGCACAAGCTGGGGATCGGCCGAGTCCCCC-TCTGCGTGCTGCCGACCCTACTACC
66 GGGGCGGGATACACAAGCCGGGGATCGGCCG-GGCCCCCTTCTGCATGCTGCCGACCCTACTACC
* *
15735119 ACAACCCTCGGTCGAGTCTGATCTTAGACTAGGAATGAACT
130 ACAACCCTCGATCGAGTCCGATCTTAGACTAGGAATGAACT
15735160 CCGTATGCGT
Statistics
Matches: 144, Mismatches: 24, Indels: 4
0.84 0.14 0.02
Matches are distributed among these distances:
184 2 0.01
185 136 0.94
186 6 0.04
ACGTcount: A:0.22, C:0.28, G:0.30, T:0.20
Consensus pattern (185 bp):
GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACAGACGCTCAGCCGGCCAGA
GGGGCGGGATACACAAGCCGGGGATCGGCCGGGCCCCCTTCTGCATGCTGCCGACCCTACTACCA
CAACCCTCGATCGAGTCCGATCTTAGACTAGGAATGAACTTTGTATGCTTAGACG
Found at i:15735874 original size:26 final size:26
Alignment explanation
Indices: 15735845--15735897 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15735835 CTGGTTCGAT
*
15735845 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15735871 CTTAGACTGGGAATGTACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15735897 C
1 C
15735898 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15737809 original size:26 final size:26
Alignment explanation
Indices: 15737773--15737825 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15737763 CCAGTTTGAT
15737773 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15737799 CTTAGACTGGGAATGTACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15737825 C
1 C
15737826 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15738681 original size:26 final size:26
Alignment explanation
Indices: 15738652--15738702 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15738642 TGATCTGATC
*
15738652 TTAGACTGGGAATGAACTCTGTATGG
1 TTAGACTGGGAATGAACTCCGTATGG
15738678 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
15738703 CCTAAGCCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.14, G:0.29, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGG
Found at i:15739411 original size:26 final size:26
Alignment explanation
Indices: 15739375--15739425 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
15739365 TGGTCTGACC
15739375 TTAGACTGGGAATGAACTCCGTATGG
1 TTAGACTGGGAATGAACTCCGTATGG
15739401 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
15739426 CCTAAGCCAA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.16, G:0.29, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGG
Found at i:15739589 original size:723 final size:720
Alignment explanation
Indices: 15737959--15740129 Score: 3292
Period size: 723 Copynumber: 3.0 Consensus size: 720
15737949 CGGTTCGATC
* ** * * *
15737959 TTAGACTGGGAGTGAACTCCGTATGCCTAAGCCAACCGACAAAACGAGCGGAGGGACAGGTGGGC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGCGGG-CGGGAGGGC
* ** * * * * *
15738024 ACTACGTCGAACAGAGAGGCGGATGTGTAAGCCGTAGATCGATAGGGTGGTAGGTGGGTTTAGGC
65 ATTACGTCGGCCAGAGAGGCGGATGCGCAAGCTGTGGCTCGATAGGGTGGTAGGTGGGTTTAGGC
* * * *
15738089 ACATCTTCATATTTTTGCCGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCT
130 ACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCACACAATGGTCCCT
* * * * **
15738154 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTTGTTTTC-TATTTTAATGATTTTCAAAACT
195 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCAAATTTTCACGATTTTTGAAACT
*
15738218 TTTTACGGTTTCAGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTAGGTAGACG
260 TTTTACGG-TTCAGATTTTTTAAAATTTTTTT-AGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * * *
15738283 TGATGCTTTTATTTTTGTTGTCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
323 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
15738348 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGT
388 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGT
*
15738413 AAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
453 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
15738478 ATAAGGGCCAAGTACCAGCAACTGTCGCATATCATGTGCG--CA-CCCCCCCGATCGCCGGAACC
518 ATAAGGGCCAAGTACCAGCAACTGTCGCATATCATGTGCGCACACCCCCCCCGATCGCCGGAACC
* *
15738540 CTAATGCCGTCGATCAAGTTCTCCGACAATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACA
583 CTAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACA
* * * *
15738605 TGCCCAAGCCCAGCATGTGCTGTCGCAACCCTCGATCTGATCTGATCTTAGACTGGGAATGAACT
648 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACT
*
15738670 CTGTATGG
713 CCGTATGG
* *
15738678 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACAAGCGGGCGGACGGGAGGGC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGC-GGCGGGCGGGAGGGC
* *
15738743 ATTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTATGGCTCGATAGGGTGGTAGGTGGGTTTAGG
65 ATTACGTCGGCCAGAGAGGC-GGATGCGCAAGCTGTGGCTCGATAGGGTGGTAGGTGGGTTTAGG
* * * *
15738808 CACGTCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATACACACAATGGTCAC
129 CACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCACACAATGGTCCC
*
15738873 TTAAGCCTTCATTTGAAGTTTCATGGCAAGACGACTCGTTTTCAAATTTTCACGATTTTTGAAAC
194 TTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCAAATTTTCACGATTTTTGAAAC
* *
15738938 TTTTTACAGTTCAAGATTTTTTTAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
259 TTTTTACGGTTC-AGATTTTTTAAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* *
15739003 TGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCAAAAAACTCGAAGTGTACAAGATT
323 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15739068 TTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGT
388 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGT
15739133 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
453 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
*
15739198 ATAAGGGCCAAGTACCAGC-ACTTGTCGCATATCATGTGCGCACACCCCCCCCGACCGCCGGAAC
518 ATAAGGGCCAAGTACCAGCAAC-TGTCGCATATCATGTGCGCACACCCCCCCCGATCGCCGGAAC
* **
15739262 CCTAATGCCGCCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCAATAGCAC
582 CCTAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCAC
* * *
15739327 ATGCTCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCTGGTCTGACCTTAGACTGGGAATGAAC
647 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAAC
15739392 TCCGTATGG
712 TCCGTATGG
15739401 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCAGGCGGGCGGGAGGGC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGC-GGCGGGCGGGAGGGC
* * * *
15739466 ATTACATCGGCCAGAGAGGCGAGATGCGCAAGCTGTGGCTCGTTAGGGTGGTAGGTGGGTTTTGC
65 ATTACGTCGGCCAGAGAGGCG-GATGCGCAAGCTGTGGCTCGATAGGGTGGTAGGTGGGTTTAGG
15739531 CACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCACACAATGGTCCC
129 CACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCACACAATGGTCCC
* * * * * *
15739596 TTAAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCAATTTTTCCCAATCTTTGAAAC
194 TTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCAAATTTTCACGATTTTTGAAAC
* * *
15739661 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGAGTTTTGGCCCTAAACTTGGTAGACA
259 TTTTTACGGTTC-AGATTTTTTAAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
*
15739726 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATACAGCTAAAAACTCGAAGTGTACAAGATT
323 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * * *
15739791 TTGTGAGCATTTTAAAAAAGTATCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGT
388 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGT
*
15739856 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAAT
453 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
**
15739921 ATAAGGGCCAAGTACCAGCAACCATCGC-TCATCATGTGCGCACACCCCCCGGCCCCCCCGATCG
518 ATAAGGGCCAAGTACCAGCAACTGTCGCAT-ATCATGTGCGCACA-----C--CCCCCCCGATCG
* * * * * * *
15739985 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGACGATGGTGTCTCGATGAAGAAAAATGCGGTA
575 CCGGAACCCTAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCA
** * * * *
15740050 CCAGCACATGCCCGAGCCGGGCATGTGCTGCCACAACCCTTGGTCCGGTCCGATCTTAGACTGGG
640 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGG
*
15740115 AATGAACTCCATATG
705 AATGAACTCCGTATG
15740130 CCTAAGTCAA
Statistics
Matches: 1317, Mismatches: 117, Indels: 25
0.90 0.08 0.02
Matches are distributed among these distances:
719 70 0.05
720 398 0.30
721 43 0.03
722 4 0.00
723 663 0.50
724 2 0.00
728 1 0.00
730 136 0.10
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (720 bp):
TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGCGGGCGGGAGGGCA
TTACGTCGGCCAGAGAGGCGGATGCGCAAGCTGTGGCTCGATAGGGTGGTAGGTGGGTTTAGGCA
CATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCACACAATGGTCCCTT
AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCAAATTTTCACGATTTTTGAAACTT
TTTACGGTTCAGATTTTTTAAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAA
ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
AGGGCCAAGTACCAGCAACTGTCGCATATCATGTGCGCACACCCCCCCCGATCGCCGGAACCCTA
ATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGC
CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCG
TATGG
Found at i:15740988 original size:26 final size:26
Alignment explanation
Indices: 15740959--15741008 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15740949 CTGGTCCGAT
*
15740959 CTTAGGCTGGGAATGAACTCCGTAGG
1 CTTAGACTGGGAATGAACTCCGTAGG
15740985 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
15741009 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.20, G:0.30, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTAGG
Found at i:15741272 original size:881 final size:857
Alignment explanation
Indices: 15739403--15741517 Score: 2889
Period size: 881 Copynumber: 2.4 Consensus size: 857
15739393 CCGTATGGTT
* * * * *
15739403 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCAGGCGGGCGGGAGGGCAT
1 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAG-GGGCGGGCAC
* * * * * * * *
15739468 TACATCGGCCAGAGAGGCGAGATGCGCAAGCTGTGGCTCGTTAGGGTGGTAGGTGGGTTTTGCCA
65 TACGTCGACCAGAGAGGCGGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* * *
15739533 CATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCACACAATGGTCCCTT
130 CATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
* * * * * *
15739598 AAGCCTTCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCAATTTTTCCCAATCTTTGAAACTT
195 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
* * *
15739663 TTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGAGTTTTGGCCCTAAACTTGGTAGACATG
260 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
15739728 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATACAGCTAAAAACTCGAAGTGTACAAGATTTT
325 ATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* * * * *
15739793 GTGAGCATTTTAAAAAAGTATCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
390 ATGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAA
* * *
15739858 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATAT
455 AATCTCAAATGCTCTTTAAGGAGGTGTGACTTCTCGAGGTTTGATGAGGAATAAGGGGCCAATAT
* * *
15739923 AAGGGCCAAGTACCAGCAACCATCGCTCATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCG
520 AAGGGCCAAGTACCAGCAACCATCGCACATCATGTACGCACACCCCCCGG-----CCGATCACCG
* * * * * *
15739988 GAACCCCAATGCCGTCGGTCAGGTTCTCTGACGATGGTGTCTCGATGAAGAAAAATGCGGTACCA
580 GAACCCCAATGCCGTCGGTCAGGTTCTCAGACGATGGTGTCCCAACGAAGAAAAATACGGCACCA
** * *
15740053 GCACATGCCCGAGCCGGGCATGTGCTGCCACAACCCTTGGTCCGGTCCGATCTTAGACTGGGAAT
645 GCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTTGGTCCGGTCCGAGCTTAGACTGGGAAT
* * *
15740118 GAACTCCATATGCCTAAGTCAAGCCACAAAATGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGACG
710 GAACTCCATATGCCTAAGTCAACCCACAAAACGAGCGTACAGGCGCTCAGCCGGCCAGAGGGACG
* * * *
15740183 AGATGCGCAAGCCAGGGATCGGTCGGGTCCCCTTCTGCGTGCTGTCGATCCTGCTGCCGCAACCT
775 AGATGCGCAAGCCAGGGATCGGTCGGGTCCCCTTCTACGTGCTGCCAATCCTACTGCCGCAACCT
* * * *
15740248 TCATTCTGGTCTGATCTT
840 TCAGTCCGGTCAGATCTA
* * *
15740266 AGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAATGAGCGGGCGGACGGGCGGGCAC
1 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GAGGGGCGGGCAC
* * * *
15740331 TACGTC-AGCCAGAGAGGCGGAATACGCATGCTACGGATCGATAGGGTGGTAGGTGGGTTTAGGC
65 TACGTCGA-CCAGAGAGGCGGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGC
*
15740395 ACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCT
129 ACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCT
* * *
15740460 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTT-TTTTTTTCACGATTTTTGAAACA
194 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT
*
15740524 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
259 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
15740589 GATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
324 GATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
15740654 TATTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTTGGCAGCAAACCTAT
389 TATGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTAC-TGGCAGCAAACCTAT
*
15740719 AAAATCTCAAATGCTCTTTAAGGAGGTGTGACTTCTCGAGGTTTGATGAGGAATAGGGGGCCAAT
453 AAAATCTCAAATGCTCTTTAAGGAGGTGTGACTTCTCGAGGTTTGATGAGGAATAAGGGGCCAAT
* * *
15740784 ATAAGGGTCAATTACCAGCAACCATCGCACATCATGTACGCACA-CCCCC-G-CGATCATCGGAA
518 ATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTACGCACACCCCCCGGCCGATCACCGGAA
* *
15740846 CCCCAATGCCGTCGGTCAGGTTTTCCAG-CGATTGTGTCCCAACGAAGAAAAATACGGCACCAGC
583 CCCCAATGCCGTCGGTCAGGTTCT-CAGACGATGGTGTCCCAACGAAGAAAAATACGGCACCAGC
* *
15740910 ACATGCTCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGGCTGGGAATGA
647 ACATGCCCGAGCCCAGCATGTGCTACCACAA-CC-C--T-T-G---G-TC-----C---G---G-
* ** *
15740975 ACTCCGTAGGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACG
690 --TCCG-A-GCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACAAAACGAGCGTACA
*
15741040 GGCGCTCAGCCGGCCAGAGGGACGAGATGCGTAAGCCAGGGATCGGTCGGGTCCCCCTT-TACGT
751 GGCGCTCAGCCGGCCAGAGGGACGAGATGCGCAAGCCAGGGATCGGTCGGGT-CCCCTTCTACGT
* *
15741104 GCTGCCAATCCTATTGCGGCAACCTTCAGTCCGGTCCAG-TCTA
815 GCTGCCAATCCTACTGCCGCAACCTTCAGTCCGGT-CAGATCTA
15741147 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAGGTGGCGGGCAC
1 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAGG-GGCGGGCAC
* * *
15741212 TACGCCGACCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTCGTAGGTGGGTTTAGGCA
65 TACGTCGACCAGAGAGGCGGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* *
15741277 CATCTTCATATTTCTGCCATGCCATTGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTT
130 CATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
* *
15741342 AAGCCTTCCTGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
195 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
* * * * * *
15741407 TTTAC-GTTATGGGATTTTTTAAACTTTTTTCAGAGGGAGTTTTGGCCCCAAACTGGGAAAACGT
260 TTTACGGTT-CGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
*
15741471 GATCCTTGTATTTTTGTTGGCATGCACAAAACAATTTAGCTAAAAAC
324 GATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAAC
15741518 ATCATGTGCG
Statistics
Matches: 1102, Mismatches: 114, Indels: 53
0.87 0.09 0.04
Matches are distributed among these distances:
855 89 0.08
856 4 0.00
857 1 0.00
859 1 0.00
860 1 0.00
861 2 0.00
862 189 0.17
863 320 0.29
864 2 0.00
865 2 0.00
870 1 0.00
873 1 0.00
876 1 0.00
879 4 0.00
880 4 0.00
881 351 0.32
882 129 0.12
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (857 bp):
AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAGGGGCGGGCACT
ACGTCGACCAGAGAGGCGGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
ATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTA
AGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
TTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
TCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTA
TGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAA
ATCTCAAATGCTCTTTAAGGAGGTGTGACTTCTCGAGGTTTGATGAGGAATAAGGGGCCAATATA
AGGGCCAAGTACCAGCAACCATCGCACATCATGTACGCACACCCCCCGGCCGATCACCGGAACCC
CAATGCCGTCGGTCAGGTTCTCAGACGATGGTGTCCCAACGAAGAAAAATACGGCACCAGCACAT
GCCCGAGCCCAGCATGTGCTACCACAACCCTTGGTCCGGTCCGAGCTTAGACTGGGAATGAACTC
CATATGCCTAAGTCAACCCACAAAACGAGCGTACAGGCGCTCAGCCGGCCAGAGGGACGAGATGC
GCAAGCCAGGGATCGGTCGGGTCCCCTTCTACGTGCTGCCAATCCTACTGCCGCAACCTTCAGTC
CGGTCAGATCTA
Found at i:15741692 original size:26 final size:26
Alignment explanation
Indices: 15741663--15741715 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15741653 CCGATCCGAT
*
15741663 CTTAGACTGGGAATGCACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15741689 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15741715 C
1 C
15741716 CTATGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15742719 original size:713 final size:706
Alignment explanation
Indices: 15740963--15743092 Score: 2416
Period size: 704 Copynumber: 3.0 Consensus size: 706
15740953 TCCGATCTTA
15740963 GGCTGGGAATGAACTCCGTAGGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
1 GGCTGGGAATGAACTCCGTAGGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
* *
15741028 AACGAGCGTACGGGCGCTCAGCCGGCCAG-AGGGACGAGATGCGTAAGCCAGGGATCGGTCGGGT
66 AACGAGCGTACGGGCGCTCAGCTGGCCAGAAGGG-CG-GATGCGCAAGCCAGGGATCGGTCGGGT
* * * * * *
15741092 CCCCCTTTACGTGCTGCCAATCCTATTGCGGCAACCTTCAGTCCGGTCCAGTCTAAGACTGGGAA
129 CCCCCTCTACGTGCTGCCGATCCTGTTGC-GCAACCCTCGGTCCGGTCCA-TCTTAGACTGGGAA
* * *
15741157 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGAGGTGGCGGGCACTACGCCGACC
192 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-AGGCGGCGGGCACTACGTCGGCC
*
15741222 AGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATA
256 AGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* *
15741287 TTTCTGCCATGCCATTGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCCT
321 TTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* *
15741352 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGTTAT
386 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAGGTT-C
* * * *
15741417 GGGATTTTTTAAACTTTTTTCAGAGGGAGTTTTGGCCCCAAACTGGGAAAACGTGATCCTTGTAT
450 GAGATTTTTTAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTAT
* * ** ******* * *
15741482 TTTTGTTGGCATGCACAAAACAATTTAGCTAAAAACATC-ATGTGCGCACA-CCCCCCCGATCGT
514 TTTTGTTGGCATGCACAAAACAATTCAGCTAAAAA-ATCGAAGTGAACA-AGATTTTGTGACCAT
* ** * ** *** *** * * * * *
15741545 TGGAACCCCAA-TG-CCGTC-GGTCAGGTTCTCCGACGATGGTGTCTCG-A-CGAA--GAAAAAT
577 TTGAA--AAAAGTGTCC-CCATTTCAGACACTTTAAC-A-GCT-ACTGGCAGCAAACTGTAAAAT
**** ** ** * * * * ** * ** ** *
15741603 AC-GAAA--C-C----AGCACATGCCAGAGC-CCAGCATGTGTTGCCGTAACACTCGATCC-GAT
636 -CTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG-ATTTGATG-AGGGATA-GGGGGCCATAT
** ** **
15741658 CCGATCTTA-
697 AAGGGCCAAG
* * * * *
15741667 GACTGGGAATGCACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTATGTCAACCCATGA
1 GGCTGGGAATGAACTCCGTAGGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
* * * *
15741732 AACGAGCGTACGGGCACTCAACTGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGCCGGGTC
66 AACGAGCGTACGGGCGCTCAGCTGGCCAGAAGGGC-GGATGCGCAAGCCAGGGATCGGTCGGGTC
* * * * ** *
15741797 CTCCTCTGCGTGTTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAAT
130 CCCCTCTACGTGCTGCCGATCCTG-TTGCGCAACCCTCGGTCCGGTCC-ATCTTAGACTGGGAAT
* * *
15741862 GAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCAGGGGGGCGGGCACCACGTCGGCCA
193 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCA-GGCGGCGGGCACTACGTCGGCCA
* ** * * * *
15741927 GAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGAAGGTTGTTTTAAGCACATCTTCATAT
257 GAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* ** * ** *
15741992 TTCTGCCATGCCAATGCCATTTTTTTTCCTTGTAAATTCATACAGTGGTCAATTAAGCCTTCGTG
322 TTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG
* * * *
15742057 TGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTGGAAACTTTTTATGGCTCG
387 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA-GGTTCG
* * *
15742122 AGATTTTTTCAAATTTTTTC-GACAGGATTTTTGGCCCCAAACTTGGTATACATGATCCTTGTAT
451 AGATTTTTT-AAATTTTTTCAGA-AGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTAT
* * *
15742186 TTTTGTTGGCATGCACAAAACAATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGGCCATTT
514 TTTTGTTGGCATGCACAAAACAATTCAGCTAAAAAATCGAAGTGAACAAGATTTTGTGACCATTT
*
15742251 GAAAAAAGTGTCCCCATTTCAGACACTTTAACAGCTACTGGCAGCAAACCTGTCAAATCTGAAAT
579 GAAAAAAGTGTCCCCATTTCAGACACTTTAACAGCTACTGGCAGCAAA-CTGTAAAATCTGAAAT
15742316 GCTCTTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
643 GCTCTTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCC-ATATAAGGGCCAAG
*
15742381 GGCTGGGAATGAACTCCGTAGGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
1 GGCTGGGAATGAACTCCGTAGGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
* * *
15742446 AACGAGCGTGCGGGCGCTCAGCTGGCCAGAAGGGCGGATGCGCAAGCCGGGGATCGGTTGGGTCC
66 AACGAGCGTACGGGCGCTCAGCTGGCCAGAAGGGCGGATGCGCAAGCCAGGGATCGGTCGGGTCC
* *
15742511 CCCTCTACGTGCTGCCGATCCTGTTGGCACAACCCTCGGTCCAGTCCTATCTTAGACTGGGAATG
131 CCCTCTACGTGCTGCCGATCCTGTT-GCGCAACCCTCGGTCCGGTCC-ATCTTAGACTGGGAATG
* * * * *
15742576 AACTCCGTATGCCTAAACCAACCGACGAAACTAGTGGGCTGGCGAGCGGGCACTACGTCGGTCAG
194 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCG-GCGGGCACTACGTCGGCCAG
*
15742641 AGAGGTGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
258 AGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * **
15742706 TCTGGCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAT
323 TCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* *
15742771 GAAGTTTCATGGCGAGACGACTCGTATTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGA
388 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA-GGTTCGA
* * * *
15742836 GATCTTTTAAAATTTTTTCAGAAGGAGTTTTGTCCCCAAACTTGGTAGACGTGATCCTTTTATTT
452 GAT-TTTTTAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTATTT
* * * *
15742901 TTGTTGGCACGAACAAAACAATTCAGCTAAAAACTCGAACT-AACAAGATTTTGTGACCATTTGA
516 TTGTTGGCATGCACAAAACAATTCAGCTAAAAAATCGAAGTGAACAAGATTTTGTGACCATTTGA
* ** *
15742965 AAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGC
581 AAAAAGTGTCCCCATTTCAGACACTTTAACAGCTACTGGCAGCAAAC-TGTAAAATCTGAAATGC
* *
15743030 TCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCTATATAAGGGCCAAG
645 TCTTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCC-ATATAAGGGCCAAG
15743093 TACAAGCACC
Statistics
Matches: 1198, Mismatches: 193, Indels: 62
0.82 0.13 0.04
Matches are distributed among these distances:
701 3 0.00
702 5 0.00
703 13 0.01
704 495 0.41
705 13 0.01
706 9 0.01
708 1 0.00
709 1 0.00
711 4 0.00
712 146 0.12
713 409 0.34
714 99 0.08
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (706 bp):
GGCTGGGAATGAACTCCGTAGGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
AACGAGCGTACGGGCGCTCAGCTGGCCAGAAGGGCGGATGCGCAAGCCAGGGATCGGTCGGGTCC
CCCTCTACGTGCTGCCGATCCTGTTGCGCAACCCTCGGTCCGGTCCATCTTAGACTGGGAATGAA
CTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGCGGGCACTACGTCGGCCAGAGA
GGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
GCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAA
GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAGGTTCGAGATT
TTTTAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTATTTTTGTT
GGCATGCACAAAACAATTCAGCTAAAAAATCGAAGTGAACAAGATTTTGTGACCATTTGAAAAAA
GTGTCCCCATTTCAGACACTTTAACAGCTACTGGCAGCAAACTGTAAAATCTGAAATGCTCTTTA
AGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCCATATAAGGGCCAAG
Found at i:15743286 original size:25 final size:26
Alignment explanation
Indices: 15743251--15743302 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
15743241 TCCGGTCTGA
15743251 CTTAGACTGGGAATGAACTCC-TATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15743276 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15743302 C
1 C
15743303 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 20 0.80
26 5 0.20
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15744123 original size:455 final size:454
Alignment explanation
Indices: 15743266--15744176 Score: 1231
Period size: 455 Copynumber: 2.0 Consensus size: 454
15743256 ACTGGGAATG
* * *
15743266 AACTCCTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAACGAGTGTGCA
1 AACTCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTACA
* * * * *
15743331 GACGCCCAGCCGGCCAGAGGGGCGGGATGCGTAAGTCGGGGATCGATCGGGTCCCCCTCTACGTG
66 GACGCCCAGCCAGCCAGAGGGGCGGGAAGCGCAAGTCGAGGATCGACCGGGTCCCCCTCTACGTG
* * * ** * * **
15743396 CTGCTGATCCTGCTGCTGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATAAACTCCGTATG
131 CTACCGATCCTACCACTACAACCCTCGATCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATG
* *
15743461 CCTAAGCCAACCGACGAAACGAACGAACGGGTGGAAGGGCACTACGCCAGCCAGAGAAGCGGGAT
196 CCTAAGCCAACCGACGAAACGAACGAACGGGAGGAAGGGCACTACGCCAACCAGAGAAGCGGGAT
** * **
15743526 GCGTAAGCCACGGATCGATAGGGTGGTAGGTGCGTTTATTCACATCTTCATATTTTTGCCATGCC
261 GCACAAGCAACGGATCGATAGGGTGGTAGGTGCGTTTAGGCACATCTTCATATTTTTGCCATGCC
*
15743591 AATGCCATTTTTCTTACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATATGAAGTTTCATG
326 AATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATATGAAGTTTCATG
* * *
15743656 GCAAGACGACTCGATTTT-TATTTTTCATGATTTTCAAAACTTTTTATGGTTTGAGATTTTTTAA
391 GCAAGACGACTCG-TTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAA
*
15743720 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC
1 AACTCC-TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTAC
* * * * * ** **
15743785 GGGCGCTCAGCCAGCCAGAGGGGCGGGAAGCGCAAG-CTGAGGATTGACCGGGTCTCGTTCTGTG
65 AGACGCCCAGCCAGCCAGAGGGGCGGGAAGCGCAAGTC-GAGGATCGACCGGGTCCCCCTCTACG
* *
15743849 TGCTACCGATCCTACCACTACAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCTGTA
129 TGCTACCGATCCTACCACTACAACCCTCGATCCAGTCCGATCTTAGACTGGGAATAAACTCCGTA
** * * * *
15743914 TGCCTAAGCCAGTCGATGAAACGAAC-AGGCGGGCAGG-CGGGCACTATGCCAACCAGA-AAGGC
194 TGCCTAAGCCAACCGACGAAACGAACGA-ACGGG-AGGAAGGGCACTACGCCAACCAGAGAA-GC
*
15743976 GGGATGCACAAGCAATGGATCGATAGGGTGGTAGGTAG-GTTTAGGCACATCTTCATATTTTTGC
256 GGGATGCACAAGCAACGGATCGATAGGGTGGTAGGT-GCGTTTAGGCACATCTTCATATTTTTGC
* * *
15744040 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTACGCCTTCATGTGAAGT
320 CATGCCAATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATATGAAGT
* * **
15744105 TTCATGGCAGGACGACTCGTTTTCTATTTTTTACGATTTTTGAAACTTTTTACGGTTCGAGATTT
385 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTT
15744170 TTTAA
450 TTTAA
15744175 AA
1 AA
15744177 TTTTTTCAGA
Statistics
Matches: 396, Mismatches: 54, Indels: 13
0.86 0.12 0.03
Matches are distributed among these distances:
454 14 0.04
455 379 0.96
456 3 0.01
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (454 bp):
AACTCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTACA
GACGCCCAGCCAGCCAGAGGGGCGGGAAGCGCAAGTCGAGGATCGACCGGGTCCCCCTCTACGTG
CTACCGATCCTACCACTACAACCCTCGATCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATG
CCTAAGCCAACCGACGAAACGAACGAACGGGAGGAAGGGCACTACGCCAACCAGAGAAGCGGGAT
GCACAAGCAACGGATCGATAGGGTGGTAGGTGCGTTTAGGCACATCTTCATATTTTTGCCATGCC
AATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATATGAAGTTTCATG
GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAA
Found at i:15744618 original size:26 final size:26
Alignment explanation
Indices: 15744589--15744641 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15744579 CCGCTCCAAT
15744589 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15744615 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15744641 C
1 C
15744642 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15745483 original size:26 final size:26
Alignment explanation
Indices: 15745447--15745530 Score: 141
Period size: 26 Copynumber: 3.2 Consensus size: 26
15745437 CCCGAGCCTA
* *
15745447 GTATGCTTAGATTTGGAATGAACTTC
1 GTATGCTTAGACTGGGAATGAACTTC
*
15745473 GTATGCTTAGACTGGGAATGAACTCC
1 GTATGCTTAGACTGGGAATGAACTTC
15745499 GTATGCTTAGACTGGGAATGAACTTC
1 GTATGCTTAGACTGGGAATGAACTTC
15745525 GTATGC
1 GTATGC
15745531 CTAAGTCAAC
Statistics
Matches: 54, Mismatches: 4, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 54 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
GTATGCTTAGACTGGGAATGAACTTC
Found at i:15745924 original size:27 final size:28
Alignment explanation
Indices: 15745893--15745951 Score: 68
Period size: 26 Copynumber: 2.2 Consensus size: 28
15745883 AGATGACTCG
** *
15745893 TTTTTTATTTTTCACGA-TTTTT-AAAA
1 TTTTTTATGGTTCAAGATTTTTTAAAAA
*
15745919 CTTTTTATGGTTCAAGATTTTTTAAAAA
1 TTTTTTATGGTTCAAGATTTTTTAAAAA
15745947 TTTTT
1 TTTTT
15745952 CAGAAGGAGT
Statistics
Matches: 26, Mismatches: 5, Indels: 2
0.79 0.15 0.06
Matches are distributed among these distances:
26 13 0.50
27 5 0.19
28 8 0.31
ACGTcount: A:0.27, C:0.07, G:0.07, T:0.59
Consensus pattern (28 bp):
TTTTTTATGGTTCAAGATTTTTTAAAAA
Found at i:15746391 original size:26 final size:26
Alignment explanation
Indices: 15746362--15746414 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15746352 CTGATCCGAT
15746362 CTTAGACTGGGAAAGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
*
15746388 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
15746414 C
1 C
15746415 CTAACTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCGTATG
Found at i:15747289 original size:25 final size:26
Alignment explanation
Indices: 15747255--15747306 Score: 97
Period size: 25 Copynumber: 2.0 Consensus size: 26
15747245 CCGATTTGAT
15747255 CTTAGACTGGGAATGAACT-CGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15747280 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15747306 C
1 C
15747307 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 19 0.73
26 7 0.27
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15747646 original size:893 final size:889
Alignment explanation
Indices: 15743720--15752525 Score: 11091
Period size: 893 Copynumber: 10.0 Consensus size: 889
15743710 GATTTTTTAA
*
15743720 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * * * ** *
15743785 GGGCGCTCAGCCAGCCAGAGGGGCGGGAAGCGCAAGCTGAGGATTGACCGGGTCTCGTTCTGTGT
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGT
* * ** * * * * *
15743850 GCTACCGATCCTACCACTACAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTCTGTAT
131 GCTGCCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
** * * * * ** *
15743915 GCCTAAGCCAGTCGATGAAACGAACAGGCGGGCAGGCGGGCACTATGCCAACCAGAAAGGCGGGA
196 GCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGA
* ** *
15743980 TGCACAAGCAATGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTTTGCCATGC
260 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGC
*
15744045 CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTACGCCTTCATGTGAAGTTTCAT
325 CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * *
15744110 GGCAGGACGACTCGTTTTCTATTTTTTACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAA
390 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAA
** *
15744175 AATTTTTTCAGAAGGTTTTTTGGCCCCAAACTTGGT--A---G-TCATTGTATTTTTGTTGGCAT
455 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * * * *
15744234 GCATAAAAAACTTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACCATTTGAAAAATGTTTC
520 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * * *
15744299 CCCACTTCGGACACTTTAATGGCTACTGGCAGTAAACCCGTAAAATCTCAAATGCTCTTTAAGGT
585 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
15744364 GGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
650 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * * *
15744429 TCACACATCATGTGCGTAAACCCCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCACCGGAC
715 TCGCACATCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTC
** * *
15744493 AGGTTCTCCGGTGATGGTGTCCCGACGAAGAAAAATGCAGCACTAGCACATGCCCGAGCCCAGCA
779 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * *
15744558 TGTGCTGCTGCAACCCTCGGTCCGCTCCAATCTTAGACTGGGAATG
844 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
*
15744604 AACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * *
15744669 GGGCGCTCAGCCCGCCAGA-GGGCAGGATGCACAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGT
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGT
* * * * * * * * *
15744733 GCTACTGTTCTTGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTAA
131 GCTGCCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * *
15744798 GCCTAAGCCAACCAACGAAATGA---ACGGGC-GGC---CACTACACCGGCCAGAGAGGCAGGAT
196 GCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
* * * *
15744856 GCGCAAGCGGCGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTCCCTATGC
261 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCC-ATGC
*
15744921 CAATGCCATTTTTC-GGCTTGT-AATTCAATTACACAT-GTCCCTTAAGCCTTTCATGGGAAGTT
325 CAATGCCATTTTTCTGGCTTGTAAATTC-A-TACA-ATGGTCCCTTAAGCC-TTCATGTGAAGTT
* * *
15744983 TCAT-GCAAGACGTACTCCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAAGGTTTGAGATT
386 TCATGGCAAGACG-ACT-CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGA--
* * * *
15745047 TTTTTTAAAAATTTGTTCATGAA-G-TTTTTTGCCCC-AACTTGGTTGACGTAGCATCCTTGTAT
447 TTTTTT-AAAATTTTTTCA-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGT-G-ATCCTTGTAT
* *
15745109 TTTGTGAT-GCATGCAC-AAAAAATATCAGCTTAAAAACTCGAAGTGTACATGATTTTGTGACCA
508 TTT-TGTTGGCATGCACAAAAAAAT-TCAGC-TAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
15745172 TTTTGAAAAAAGTAGTCCCCATTTCGGACACTTTAATGGCTCACT-GCAAG-AAACCTGCAAAAT
570 -TTTGAAAAAAGT-GTCCCCATTTCAGACACTTTAATGGCT-ACTGGC-AGCAAACCTGTAAAAT
* * *
15745235 CTTCAAATGTTGCTTTAA--GGGTGTGATGTTCTCAAAGGTTTGATGA-GGATTAGGGGGCCACT
631 C-TCAAATGCT-CTTTAAGGGGGTGTGA-GTTCTC-GAGGTTTGATGAGGGA-TAGGGGGCCAAT
* * **
15745297 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCTGGCCCCTTCGATCG
691 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCG
* * * * ** **
15745362 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGGTGGTGTCTCGGTGAAGAAAAATGCGGTG
756 CCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCA
* * ** * * *** *
15745427 CCAGCACATGCCCGAGCCTAG--TATGCT-TAG--A--TTTGGAATGAACTTCGTATGCTTAGAC
821 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG-A-TCCG-AT-CTTAGAC
15745485 TGGGAATG
882 TGGGAATG
* * *
15745493 AACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAAAGAGCGTAC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
15745558 GGGCCCTCAGCCGGCCAGAGGGGCGGGATGCGCCAGCCGGGGATTGG-TCGGGTCCCCCTCTGTG
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCG
* * ** * *
15745622 TGCTGTCGATCCTACTGCTGCAACCCTC-AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCAT
130 TGCTGCCGATCCTGCTGCCACAACCCTCGA-TTCGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
15745686 ATGCCTAAGCCAATCGACGAAACGA---GCGGACGGGCGGGCACTACGTCGGCCAAAGAGGCGGG
194 ATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
* * * *
15745748 ATGCGCAAGCCATGGACCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATG
259 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
*
15745813 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
324 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * * * * *
15745878 TCGCAAGATGACTCGTTTTTTATTTTTCACGATTTTTAAAACTTTTTATGGTTCAAGATTTTTTA
389 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTA
* * *
15745943 AAAATTTTTCAGAAGGAGTTTTGGCCCCAAACTAGGTAGACGTGATCCTTGTATTTTTATTGGCA
454 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * *
15746008 TGCACAAAAAAATCCAACTAGAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
519 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
*
15746073 CCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
584 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
15746138 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTA-CAGCACCC
649 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * ** * * *
15746202 ATCACACATCATGTGTGCACA-CCCCCCGGCCCCCCCGATCTACGGAACCCCAATACCGTCGGTC
714 ATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTC
* * ** * **
15746266 AGGTTCTCCGGCGATGGTGTCCAGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCGTGCA
779 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * *
15746331 TGTGCTGCCGCTACCCTCGGTCTGATCCGATCTTAGACTGGGAAAG
844 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
* * * * *
15746377 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAACTTAACACATGAAAGGAGCGTGC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * ** *
15746442 AGGAGCTCAGCTGACCAGAGGGGTGGGATGCGCAAGCCGGGGATCGACTGGGTCCCTTTCTGTGT
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGT
* * ** * * *
15746507 GCTGTCAATCCTAATGCCGCATCCCTCG-GTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
131 GCTGCCGATCCTGCTGCCACAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTA
* *
15746571 TACCTAAGCCAACTC-ACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGG
195 TGCCTAAGCCAAC-CGACGAAACGAGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGG
* * *
15746635 GATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTGCCAT
258 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCAT
* * *
15746700 GCCAATGCCTTTTTTTTGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
323 GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * * *
15746765 ATGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTTTTAAACTTTTTACTGTTCGGGATTTTT
388 ATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTTGAAACTTTTTACGGTTCGAGATTTTT
* ** * * *
15746830 TAAAATTTTCTCAGGCGAAGTTTTGGCCCCAAACGTGGTAGACGTGATCCTTGTATTTTTTTTGG
452 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
*
15746895 TATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
517 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * * *
15746960 ATCCCCATTTCAGACACTTTAATGTCTACTGGCAGCAAACCTGTAAAATCTCAACTGCTCTTTAC
582 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
15747025 GGGGGTGAGAGTTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCAC
647 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * *
15747090 CCATCGTACATCATGTGCGCACACCCCCCCCGACCCCCTCCGATTGCCGAAACCCCAATACCGTC
712 CCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCCC-CCGATCGCCGAAACCCCAATGCCGCC
* * * * * * * **
15747155 GATCAAGTTCTCGGGCGATGGTGTCCCGACAAAGAAAAATGCCGG-ACCAGCCCTTGCCCGAGGA
775 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATG-CGGCACCAGCACATGCCCGAGCC
* **
15747219 CAGCATGTGCTGCCGGAACCCTCGGTCCGATTTGATCTTAGACTGGGAATG
839 CAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
* *
15747270 AACT-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAGCGTGC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
15747334 GGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCTGCTGGGTCCCCCCTCTACG
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGT-CCCCCTCTGCG
* * *
15747399 TGCTGCCGATCCTGCTGCCCCAACCCTCTATTCGGCCTGATCTTAGACTGGGAATGAACTCCGTA
130 TGCTGCCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
15747464 TGCCTAAGCTAACCGACGAAACGAGCGAGCAGGCAGGCGAGCACTACGCCGACCAGAGAGGCGGG
195 TGCCTAAGCCAACCGACGAAACGAGCG-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
* * * * *
15747529 ATGCACAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAGTTGTACCATG
259 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
*
15747594 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAGGCCTTCATGTGAAGTTTCA
324 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
** *
15747659 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTT
389 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGA-TTTTTT
* * * *
15747724 TAAATTTTTTCAAAAGGAGTTTTGGCCCCAAAATTGGTAGACGTGATCCTTGTATTTTTTTTGGC
453 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
*
15747789 ATGCACAAAAAAATTCAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
518 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
*
15747854 TCCCCATTTCAGACACTTTAATGGCTACTAGG-AGCAAACCTGTAAAATCTCAAATGCTCTTTCA
583 TCCCCATTTCAGACACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* ** *
15747918 GGAGGTGTGAGTTCTTAAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
647 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * *
15747983 CCATCGCACATCATGTGCGCACA-CCCCCCGACCCCCCCCGATCGCCGAAACCCCAATGCTGCAG
712 CCATCGCACATCATGTGCGCACACCCCCCCG-GCCCCCCCGATCGCCGAAACCCCAATGCCGCCG
* * * * *
15748047 GTCAAGTTCTCCGATGATGGTGTCCCAACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCA
776 GTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * *
15748112 GCATGCGCTGTCGGAACCCTCGGTCCAATCCAATCTTAGACTGGGAATG
841 GCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
** * *
15748161 AACTTTGTATGCTTAGACAGGGAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * * *
15748226 GGGTGCTTAGCCGGCCAGAGGGGCGGGATGCGTAAGCTGGGGATCAG-TCGAGTCCCCTTCTACG
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCG
** * ** * * * * * * * * *
15748290 TGCTGTTGATCGTTTTGCCGCAACCATCGGTTTGTTTTGATCTTAGACTAGGAATGAACTTCATA
130 TGCTGCCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
15748355 TGCCTAAGCCAACAGACGAAACGAGCGGGCGGGCGGACGGGCACTATGCCGGCCAAAGAGGCGGG
195 TGCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
* * *
15748420 ATGCGCATA-CCGTGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCAT
259 ATGCGCA-AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCAT
*
15748484 GCCAATGCCATTTTTCTGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
323 GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * * * *
15748549 ATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACCTTTTACGATTCGATATTTTTG
388 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT
15748614 AAAATTTTTTCAGAA-GAGGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAATATTTTG--
453 AAAATTTTTTCAGAAGGA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT-AT-TTTTGTT
* * * * *
15748676 GGCATGCCCAAAAATATTCAGCTAAAAACTCGAACTGTAC-AGATTTTTTGACAATTTGAAAAAA
515 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
*
15748740 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTT
580 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* ** * * *
15748805 AAGGAGGTGTGAGTTCTCGACATTTGATCAGGTATAGGGGGCCAATACAAGGGCCAAGTACCAGC
645 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
** **
15748870 ACCCATCGCACATCATGTGCGCACA--CCCCCGGCCCCCCCGATCGTTGAAGGCCCAATGCCGCC
710 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCC
15748933 GGTC-GGTTCTCCGACGATGGTGTCCCGACGAAG----A------A--A--A-AT----------
775 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * *
15748972 -G-A--TG-T--CGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGTATG
840 AGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
* * *
15749015 AACTCTGTATGCTTAGACTGGG-ATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGAGTGC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * * * * *
15749079 GGGTGTTCAGTCGCCCAGAGGGGTGGGATGTGTAACCCGGGGATCAG-TCGGGTCCCCCTCT--A
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCG
* * * * * * * * *
15749141 TG-TG-C--T-AT-C-G---CAACCGTCGGTCCGATCTGATCTTAGAATGAGAATGAACTCCATT
130 TGCTGCCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
15749196 TGCCTAAGCCAACCAACGAAATGAGCGGACGGGCGGGCGGGCACTACGTCGGCCAGAGAGGTGGG
195 TGCCTAAGCCAACCGACGAAACGAGCGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
*
15749261 ATGCGCAAGCCGTTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
259 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
* *
15749326 CCAATGCCATTTATCTGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
324 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
** *
15749391 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACAATTCAAGATTTTTTA
389 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTA
** * *
15749456 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTTTTAGATGGGATCCTTGTATTTTTGTTGGCA
454 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
15749521 TGCACAAAAAAATCCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
519 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
**
15749586 CCCTGTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
584 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
15749651 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCC
649 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * *
15749716 ATTGCACATCATGTGCGCA-AACCCCCC-GCCCCCCCGGATCGCC-AAACCCTAATGCCGTCGGT
714 ATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC-GATCGCCGAAACCCCAATGCCGCCGGT
* * *
15749778 CAAGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCAAATGCCCGAGCCCAAC
778 CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* *
15749843 ATGTGCTGCCGTAACCCTGGGTCC-AGTCCGATCTTAGACTGGGAATG
843 ATGTGCTGCCGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATG
* * *
15749890 AACTCCGTATGCTTAGACTGTGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCATGC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * *
15749955 GGGCGCTCAGCCAGCCAGAGGGGCGGGATACGCAAGCCGAGGATCGGTTGGGTCCCTCTCTGCAT
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGT
* **
15750020 GCTGCCCGATCCTGCTGCCACAACCCTTGA-TCTGGTCTGATCTTAGACTTAGAATGAACTCCGT
131 GCTG-CCGATCCTGCTGCCACAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGT
* * *
15750084 ATGCCTAAGCCAACCGA-TAAA--A----CGAGCGGGCGGGCACTACACCGGCCAGAGAGGCGGG
194 ATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
* * * *
15750142 ATGCGCAAGCTGTTGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
259 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
* *
15750207 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCATGTCAAGTTTCA
324 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* *
15750272 TGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
389 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTA
* * * *
15750337 AAATTTTTTCAGAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTATAGGCA
454 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* * * *
15750402 TGCACAAAACAATTCAGCTAAAAACTCGAAGTGTAGAAGATTTTGTGACTATTTGAAAAATGTGT
519 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* *
15750467 CCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGGAAAATCTCAAATGCTCTTTAAGG
584 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * *
15750532 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATGTAAGGGTCAAGTACCAGCACCC
649 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * *
15750597 ATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCAATCGTCGGAACCCTAATGCCGCCGGTC
714 ATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTC
** * * *
15750662 AGGTTCTCCGGTGATGGTGTCCCGCCGAAGAAAAATGCGGCACCAGCACATTCCCAAGCCCAGCA
779 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* *
15750727 TGTGTTGTCGCAA--C-C--T----T-CGATC-----CT--G--T-
844 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
*
15750753 --CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * *
15750812 -GGCGCTCAACCGGCTAGAGGGGCGGGATGTGCAAGCCGAGGATCGGCCGAGTCCCCCTCTGTGT
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGT
* ** * *
15750876 GCTGCCGATCTTGCTGCTGCAACCCTCGATTTGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
131 GCTGCCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
15750941 GCCTAAGACAATCGACGAAAC---TGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
196 GCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
* **
15751003 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCTGTGCC
261 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCC
*
15751068 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT-AAGTTTAATG
326 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * * *
15751132 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACCTTTTACAGTTCGGGATTTTTTTAA
391 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAA
* *
15751197 ATTTTTTCAGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATG
456 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
15751262 CACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
521 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
15751327 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGAAAAATCTCAAATTCTCTTTAAGGGG
586 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
15751392 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
651 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
15751457 CGTACATCATGTGCGCACACCCCCCCGGCCCCCTCGATCGGCGAAACCCCAATGCCGCTGATCAG
716 CGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTCAG
* * * *
15751522 GTTCTCCGACGATGGTGTCCCGACGAA-AAAAATGTGGCACCAGCAAATGCCCTAGCCTAGCATG
781 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* *
15751586 TGCTGCCGCAACCCTCGATCCAATCCGATCTTAGACTGGGAATG
846 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
* *
15751630 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACAAGCGTGC
1 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * *
15751695 GGGCGCTTAGCCAGCCTGTGGGGCGGGATGCGCAAGCCGGGGATC-GATCGGGTCCCTCTCTACG
66 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGCG
* * * * *
15751759 TGTTGCCGATCCTGCTGCCACAACCCTCG-GTCTGGTCCGATCTTAGACTGAGAATGAACTTCGT
130 TGCTGCCGATCCTGCTGCCACAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
15751823 ATGCCTAAGCCAACCAATGAAATGA---GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGTGGG
194 ATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
* * * *
15751885 ATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTCGTG
259 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
** * *
15751950 CCAATGCCATTTTTCTCACTTGTAAATTCATACAATGGTCCTTTAAGCCTTCATGTGAAGTTTAA
324 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * *
15752015 TGGCAAGACGACTCATTTTTTATTTTTCACGATTTTTGAAACTTTTTTA-GGTTCGGGATTTTTT
389 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC-TTTTTACGGTTCGAGATTTTTT
* * *
15752079 AAAATTTTTTCAGAAGGAGTTTTTGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTAGGC
453 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* * * *
15752144 ATGCACAAAACATTTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACTATTTGAAAAAAGTG
518 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
*
15752209 TCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAG
583 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* *
15752274 AGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
648 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * * * * *
15752339 CATCTCACATCATGTGCGCACATCCCCGCGGCCCCCTCGATCGCTGGAACCCGAATGCCGTCGGT
713 CATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGGT
* ** * * * *
15752404 CAGGTTCTCCGACGATGGTGTCTCGGTGAAGAAAAATACAGCACCAGCACATTCCTGAGCCCAGC
778 CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* ** *
15752469 ATGTGCTGCCGCAAACCTCGGTTTGGTCCGATCTTAGACT-GGAATG
843 ATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
15752515 AACTCCGTATG
1 AACTCCGTATG
15752526 TCGTAACGGT
Statistics
Matches: 6921, Mismatches: 805, Indels: 391
0.85 0.10 0.05
Matches are distributed among these distances:
839 5 0.00
840 5 0.00
841 351 0.05
842 190 0.03
843 38 0.01
844 1 0.00
846 1 0.00
847 2 0.00
850 2 0.00
851 2 0.00
853 91 0.01
854 51 0.01
855 65 0.01
856 62 0.01
857 93 0.01
858 398 0.06
859 150 0.02
860 2 0.00
861 2 0.00
862 1 0.00
864 1 0.00
866 2 0.00
867 5 0.00
868 2 0.00
870 1 0.00
871 2 0.00
872 5 0.00
873 6 0.00
874 8 0.00
875 132 0.02
876 126 0.02
877 22 0.00
878 49 0.01
879 17 0.00
880 16 0.00
881 578 0.08
882 46 0.01
883 297 0.04
884 571 0.08
885 461 0.07
886 115 0.02
887 92 0.01
888 273 0.04
889 605 0.09
890 295 0.04
891 485 0.07
892 416 0.06
893 687 0.10
894 89 0.01
895 5 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (889 bp):
AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGCGT
GCTGCCGATCCTGCTGCCACAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCC
AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAA
ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTCAG
GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
Found at i:15748196 original size:26 final size:26
Alignment explanation
Indices: 15748146--15748198 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15748136 CCAATCCAAT
* **
15748146 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACAGGGAATGAACTACGTATG
15748172 CTTAGACAGGGAATGAACTACGTATG
1 CTTAGACAGGGAATGAACTACGTATG
15748198 C
1 C
15748199 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.15, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTACGTATG
Found at i:15749044 original size:25 final size:26
Alignment explanation
Indices: 15749000--15749051 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
15748990 CCGGTCTGAT
* *
15749000 CTTAGACTAGGTATGAACTCTGTATG
1 CTTAGACTAGGGATGAACTCCGTATG
15749026 CTTAGACT-GGGATGAACTCCGTATG
1 CTTAGACTAGGGATGAACTCCGTATG
15749051 C
1 C
15749052 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 16 0.67
26 8 0.33
ACGTcount: A:0.25, C:0.19, G:0.25, T:0.31
Consensus pattern (26 bp):
CTTAGACTAGGGATGAACTCCGTATG
Found at i:15749904 original size:26 final size:26
Alignment explanation
Indices: 15749875--15749927 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15749865 CCAGTCCGAT
15749875 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15749901 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15749927 C
1 C
15749928 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15751644 original size:26 final size:26
Alignment explanation
Indices: 15751615--15751667 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15751605 CCAATCCGAT
15751615 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15751641 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15751667 C
1 C
15751668 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15753529 original size:16 final size:16
Alignment explanation
Indices: 15753505--15753567 Score: 65
Period size: 16 Copynumber: 3.9 Consensus size: 16
15753495 GGATTTTTTT
*
15753505 AGGACTTTGGATTTCA
1 AGGATTTTGGATTTCA
*
15753521 AGGATTTTGGATTTCGG
1 AGGATTTTGGATTTC-A
* *
15753538 GGGGTTTTGGATTT-A
1 AGGATTTTGGATTTCA
15753553 ATGGATTTTGGATTT
1 A-GGATTTTGGATTT
15753568 TTAAGGGTTT
Statistics
Matches: 38, Mismatches: 7, Indels: 4
0.78 0.14 0.08
Matches are distributed among these distances:
16 26 0.68
17 12 0.32
ACGTcount: A:0.19, C:0.05, G:0.32, T:0.44
Consensus pattern (16 bp):
AGGATTTTGGATTTCA
Found at i:15753576 original size:33 final size:33
Alignment explanation
Indices: 15753510--15753578 Score: 86
Period size: 33 Copynumber: 2.1 Consensus size: 33
15753500 TTTTTAGGAC
**
15753510 TTTGGATTTCAAGGATTTTGGATTTCGGGGGGT
1 TTTGGATTTCAAGGATTTTGGATTTCGAAGGGT
**
15753543 TTTGGATTT-AATGGATTTTGGATTTTTAAGGGT
1 TTTGGATTTCAA-GGATTTTGGATTTCGAAGGGT
15753576 TTT
1 TTT
15753579 AGAATCCTAG
Statistics
Matches: 31, Mismatches: 4, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
32 2 0.06
33 29 0.94
ACGTcount: A:0.17, C:0.03, G:0.30, T:0.49
Consensus pattern (33 bp):
TTTGGATTTCAAGGATTTTGGATTTCGAAGGGT
Found at i:15754223 original size:27 final size:26
Alignment explanation
Indices: 15754193--15754243 Score: 66
Period size: 26 Copynumber: 1.9 Consensus size: 26
15754183 CGGATCCTTC
* *
15754193 TTTAGTTAAAACGGCGTTGTTTTGGGT
1 TTTA-TTAAAACGACGTCGTTTTGGGT
*
15754220 TTTATTGAAACGACGTCGTTTTGG
1 TTTATTAAAACGACGTCGTTTTGG
15754244 CTATTGATAA
Statistics
Matches: 21, Mismatches: 3, Indels: 1
0.84 0.12 0.04
Matches are distributed among these distances:
26 17 0.81
27 4 0.19
ACGTcount: A:0.20, C:0.10, G:0.27, T:0.43
Consensus pattern (26 bp):
TTTATTAAAACGACGTCGTTTTGGGT
Found at i:15754866 original size:12 final size:12
Alignment explanation
Indices: 15754851--15754930 Score: 63
Period size: 12 Copynumber: 6.7 Consensus size: 12
15754841 ATAGGGTGGC
*
15754851 TGGTCGGGTAGT
1 TGGTCGGGTAAT
**
15754863 TGGTAAGGTAAT
1 TGGTCGGGTAAT
*
15754875 TGGTCGGAG-AGT
1 TGGTCGG-GTAAT
*
15754887 TGGTTGGGTAAT
1 TGGTCGGGTAAT
* *
15754899 TGGTCGGGGAGT
1 TGGTCGGGTAAT
**
15754911 TGGTTAGGTAAT
1 TGGTCGGGTAAT
15754923 TGGTCGGG
1 TGGTCGGG
15754931 GCAGTTCGGC
Statistics
Matches: 49, Mismatches: 17, Indels: 4
0.70 0.24 0.06
Matches are distributed among these distances:
11 1 0.02
12 47 0.96
13 1 0.02
ACGTcount: A:0.16, C:0.05, G:0.46, T:0.33
Consensus pattern (12 bp):
TGGTCGGGTAAT
Found at i:15754931 original size:24 final size:24
Alignment explanation
Indices: 15754851--15754936 Score: 127
Period size: 24 Copynumber: 3.5 Consensus size: 24
15754841 ATAGGGTGGC
* *
15754851 TGGTCGGGTAGTTGGTAAGGTAAT
1 TGGTCGGGGAGTTGGTTAGGTAAT
* *
15754875 TGGTCGGAGAGTTGGTTGGGTAAT
1 TGGTCGGGGAGTTGGTTAGGTAAT
15754899 TGGTCGGGGAGTTGGTTAGGTAAT
1 TGGTCGGGGAGTTGGTTAGGTAAT
15754923 TGGTCGGGGCAGTT
1 TGGTCGGGG-AGTT
15754937 CGGCGTCGTA
Statistics
Matches: 55, Mismatches: 6, Indels: 1
0.89 0.10 0.02
Matches are distributed among these distances:
24 51 0.93
25 4 0.07
ACGTcount: A:0.16, C:0.06, G:0.45, T:0.33
Consensus pattern (24 bp):
TGGTCGGGGAGTTGGTTAGGTAAT
Found at i:15754994 original size:4 final size:4
Alignment explanation
Indices: 15754977--15755023 Score: 51
Period size: 4 Copynumber: 11.8 Consensus size: 4
15754967 TTATTTCCGT
* * *
15754977 TTTG TTTT TTTG TTTG -TTG TTCTT TTTG TTTG TTTT TTTG TTTG TTT
1 TTTG TTTG TTTG TTTG TTTG TT-TG TTTG TTTG TTTG TTTG TTTG TTT
15755024 TGTTAAATAT
Statistics
Matches: 35, Mismatches: 6, Indels: 4
0.78 0.13 0.09
Matches are distributed among these distances:
3 3 0.09
4 29 0.83
5 3 0.09
ACGTcount: A:0.00, C:0.02, G:0.17, T:0.81
Consensus pattern (4 bp):
TTTG
Found at i:15754994 original size:12 final size:12
Alignment explanation
Indices: 15754976--15755024 Score: 66
Period size: 12 Copynumber: 4.1 Consensus size: 12
15754966 CTTATTTCCG
15754976 TTTTGTTT-TTT
1 TTTTGTTTGTTT
15754987 TGTTTG-TTGTTCT
1 T-TTTGTTTGTT-T
15755000 TTTTGTTTGTTT
1 TTTTGTTTGTTT
15755012 TTTTGTTTGTTT
1 TTTTGTTTGTTT
15755024 T
1 T
15755025 GTTAAATATT
Statistics
Matches: 34, Mismatches: 0, Indels: 7
0.83 0.00 0.17
Matches are distributed among these distances:
11 3 0.09
12 24 0.71
13 7 0.21
ACGTcount: A:0.00, C:0.02, G:0.16, T:0.82
Consensus pattern (12 bp):
TTTTGTTTGTTT
Found at i:15755264 original size:49 final size:49
Alignment explanation
Indices: 15755199--15755683 Score: 597
Period size: 49 Copynumber: 9.9 Consensus size: 49
15755189 ACAAGAAAGG
* * *
15755199 GCTCCTCTTAACAGAGGCTCAACAACTTTAAAAATCTCATCTAGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTTGAAAAA
* *
15755248 GCTCCTCTCAACAGAGGCTCCACAAGTTTAAAAATCTCATC-TGGAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTTGAAAAA
** * * *
15755296 GCTCCTCTCAGTAGAGGCTCAACAACTTT-AAAATCTCATATGGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTTGAAAAA
* *
15755344 GCTCTTCTCAACAGAGGCTCCACAACTTT-AAAATCTCAACTTGAAAAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTTG----AAAAA
*
15755396 GCTCCTCTCAGCAGAGGCTCCACAACTTTAAAAATTCTC-TCTTGAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTTG-AAAAA
* * * * *
15755446 ACTCCTCTTAGCAGAGGTTCCACAACTTTAAAAATCTCAT-TTGGAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTTGAAAAA
*
15755494 GCTCCTCTCAACAGAGGCTCCATAACTTTAAAAATTCTC-TCTTGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTTGAAAAA
* * * *
15755543 GCTCCTCTCAATAGAGGCTCGACAACTTTAAAATTCTCATCTTGGAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTTGAAAAA
* *
15755592 GCTCCTCTCAACAGAAGCTCAACAACTTTAAAAATTCTCATC-TGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTTGAAAAA
* *
15755641 GCTCCTCTCAACAAAGGCTCCACAACTTTAAAATTTCTCATCT
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAA-ATCTCATCT
15755684 GTTTTCAAAT
Statistics
Matches: 376, Mismatches: 46, Indels: 27
0.84 0.10 0.06
Matches are distributed among these distances:
47 10 0.03
48 109 0.29
49 168 0.45
50 45 0.12
52 32 0.09
53 8 0.02
54 4 0.01
ACGTcount: A:0.36, C:0.26, G:0.11, T:0.26
Consensus pattern (49 bp):
GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTTGAAAAA
Found at i:15761112 original size:16 final size:16
Alignment explanation
Indices: 15761088--15761150 Score: 65
Period size: 16 Copynumber: 3.9 Consensus size: 16
15761078 GGATTTTTTT
*
15761088 AGGACTTTGGATTTCA
1 AGGATTTTGGATTTCA
*
15761104 AGGATTTTGGATTTCGG
1 AGGATTTTGGATTTC-A
* *
15761121 GGGGTTTTGGATTT-A
1 AGGATTTTGGATTTCA
15761136 ATGGATTTTGGATTT
1 A-GGATTTTGGATTT
15761151 TTAGGGGTTT
Statistics
Matches: 38, Mismatches: 7, Indels: 4
0.78 0.14 0.08
Matches are distributed among these distances:
16 26 0.68
17 12 0.32
ACGTcount: A:0.19, C:0.05, G:0.32, T:0.44
Consensus pattern (16 bp):
AGGATTTTGGATTTCA
Found at i:15761158 original size:33 final size:33
Alignment explanation
Indices: 15761093--15761161 Score: 95
Period size: 33 Copynumber: 2.1 Consensus size: 33
15761083 TTTTTAGGAC
*
15761093 TTTGGATTTCAAGGATTTTGGATTTCGGGGGGT
1 TTTGGATTTCAAGGATTTTGGATTTCGAGGGGT
**
15761126 TTTGGATTT-AATGGATTTTGGATTTTTAGGGGT
1 TTTGGATTTCAA-GGATTTTGGATTTCGAGGGGT
15761159 TTT
1 TTT
15761162 AGAATCCTAG
Statistics
Matches: 32, Mismatches: 3, Indels: 2
0.86 0.08 0.05
Matches are distributed among these distances:
32 2 0.06
33 30 0.94
ACGTcount: A:0.16, C:0.03, G:0.32, T:0.49
Consensus pattern (33 bp):
TTTGGATTTCAAGGATTTTGGATTTCGAGGGGT
Found at i:15762534 original size:24 final size:24
Alignment explanation
Indices: 15762507--15762560 Score: 74
Period size: 24 Copynumber: 2.2 Consensus size: 24
15762497 ATAGGGTGGC
15762507 TGGTCGG-GTAGTTGGTAAGGTAAT
1 TGGTCGGAG-AGTTGGTAAGGTAAT
**
15762531 TGGTCGGAGAGTTGGTTGGGTAAT
1 TGGTCGGAGAGTTGGTAAGGTAAT
15762555 TGGTCG
1 TGGTCG
15762561 AGGCAGTTTG
Statistics
Matches: 27, Mismatches: 2, Indels: 2
0.87 0.06 0.06
Matches are distributed among these distances:
24 26 0.96
25 1 0.04
ACGTcount: A:0.17, C:0.06, G:0.44, T:0.33
Consensus pattern (24 bp):
TGGTCGGAGAGTTGGTAAGGTAAT
Found at i:15762632 original size:14 final size:15
Alignment explanation
Indices: 15762613--15762645 Score: 50
Period size: 14 Copynumber: 2.3 Consensus size: 15
15762603 TTTCATTTTT
15762613 TTTTTTGTTTG-TTG
1 TTTTTTGTTTGTTTG
*
15762627 TTTTTTTTTTGTTTG
1 TTTTTTGTTTGTTTG
15762642 TTTT
1 TTTT
15762646 GTTAAATATT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
14 10 0.59
15 7 0.41
ACGTcount: A:0.00, C:0.00, G:0.15, T:0.85
Consensus pattern (15 bp):
TTTTTTGTTTGTTTG
Found at i:15762632 original size:15 final size:15
Alignment explanation
Indices: 15762612--15762645 Score: 52
Period size: 15 Copynumber: 2.3 Consensus size: 15
15762602 TTTTCATTTT
15762612 TTTTTTTGTTTG-TTG
1 TTTTTTT-TTTGTTTG
15762627 TTTTTTTTTTGTTTG
1 TTTTTTTTTTGTTTG
15762642 TTTT
1 TTTT
15762646 GTTAAATATT
Statistics
Matches: 18, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
14 4 0.22
15 14 0.78
ACGTcount: A:0.00, C:0.00, G:0.15, T:0.85
Consensus pattern (15 bp):
TTTTTTTTTTGTTTG
Found at i:15762632 original size:18 final size:18
Alignment explanation
Indices: 15762609--15762643 Score: 70
Period size: 18 Copynumber: 1.9 Consensus size: 18
15762599 TTATTTTCAT
15762609 TTTTTTTTTTGTTTGTTG
1 TTTTTTTTTTGTTTGTTG
15762627 TTTTTTTTTTGTTTGTT
1 TTTTTTTTTTGTTTGTT
15762644 TTGTTAAATA
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.00, C:0.00, G:0.14, T:0.86
Consensus pattern (18 bp):
TTTTTTTTTTGTTTGTTG
Found at i:15763615 original size:26 final size:26
Alignment explanation
Indices: 15763586--15763638 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15763576 CCGATCTGAT
15763586 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15763612 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15763638 C
1 C
15763639 CTAAGTAAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15764441 original size:890 final size:889
Alignment explanation
Indices: 15762716--15778831 Score: 15322
Period size: 890 Copynumber: 18.1 Consensus size: 889
15762706 GTGTCTACAA
* * * * *
15762716 CGTATACTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACCAACGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * * *
15762781 CTCAGCTGGCTAGAGGGGCGGGAAGCGCAAGTCGGGGATCGATCGGGTCCCCCTCTGCGTCCTGC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * * * * * *
15762846 CGATCCAGCTACAGCAACCCTCGGTCCGGTCCGATCTTAGAATGGGAATCAACTCTGTATGCCTA
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
15762911 AGCCAACCGATGAAATGAGCGGGCGGGCGGGTGGGCACTACGCCGGTCAGAGAGACGGGATGCGC
196 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
*
15762976 AAGCCGTGGATCGATAGGGTGGTAGGTGCGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
261 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
* *
15763041 CCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCATGTGAAGTTTCATGGCAA
326 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* ** *
15763106 GACGATTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTCAAAATTT
391 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAATTT
15763171 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
456 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* **
15763236 AAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTTCCAT
521 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
15763301 TTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGT
586 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
15763366 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGTA
651 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * *
15763431 CATCATGTGCGCACACCCCCCCAGCCCCCCCGATCGCCGGAACTCCAATGCCACCGGTCAGGTTC
716 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* * ** * *
15763496 TCTGACAATGGTGTCCC-GACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCTAGCATGTGC
781 TCCGACGATGGTGTCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * *
15763560 TGCCACAATCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTC
845 TGCCGCAACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * * * *
15763606 CGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTAAACCCACGGAACAAGCGTGCAGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * *** * * * *
15763671 CTTAGCCGGCCAGAGGGGCGCGATATACAAGCTGGGGATCGATCGGGTCCACCTTTGCGTGCTGC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * *** * *
15763736 TGATCCTACTGCCACAACCCTCGGTTTAGTTTGATCTTAGACTGAGAATGAACTCCGTATGCCTA
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * **
15763801 AGCGAACCGATGAAACGAGCAGGCGGGCGGATGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
196 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
** *
15763866 AAGTTGTGGATCGATAGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTTCTGCCATGCCAATG
261 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
* * *
15763931 CCATTTTTCTGGCTTGTAAATTTATACAATGGTCCTTTAAGCCTTGATGTGAAGTTTCATGGCAA
326 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
*
15763996 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTAAAAATTT
391 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAATTT
* * *
15764061 TTGCAGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTAGGCATGCACA
456 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
15764126 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATCTTGTGACCATTTGAAAAAAGTGTCACCAT
521 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
15764191 TTCAGACACTTTAACGGCTACTGGCACCAAACCTGTAAAATCTCAAATGCTCTTTCAGGTGGTGT
586 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
15764256 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
651 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** * *
15764321 CATCATGTGAGCACACCCCCCCGGCCCCCCCGATTACCGAAACCGCAATGCCGCCGGTCAGGTTC
716 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * *
15764386 TCCGACGATGGTGTCCCAGCGAAGAAAAATATGGCACCGGCACATGCCCAAGCCTAGCATGTGCT
781 TCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * *
15764451 GCCACAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTT
846 GCCGCAACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTC
* *
15764496 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTGAGTCAACCCATGAAACGAGCGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * *
15764561 CTCGGCCAGCCAGAGGGGCGGGATACGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * ** * **
15764626 TGATCCTACTACCGTAACCCTCAATCAGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTA
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
15764691 AGCCAACCGATGAAACGA--------GCGGGCAGGCACTACGCCGACCAGATAGGCGGGATGCGC
196 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
* * * *
15764748 AAGCCGTGGATCGATAGGCTGGTCGGTGGGTTTAGGCACATCCTCATATTTCTACCATGCCAATG
261 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
* *
15764813 CCATTTTTCTAGCCTGTAAATTCATACAATGGTCCCTT-AGACCTTCATGTGAAGTTTCATGGCA
326 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCATGTGAAGTTTCATGGCA
* * *
15764877 AGATGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGCTT-GAGATTTTTTAAAAT
390 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAG-GATTTTTTAAAAT
*
15764941 TTTTTCAGAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
454 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
15765006 CAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCC
519 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* *
15765071 ATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTCAA-GTGG
584 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGG
* *
15765135 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAGCCATC
648 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
15765200 GCACATCATGTGTGCACAACCCCCCGG-CCCCCCGAT-GTCGGAACCCCAATGTCGGCGGTCAGG
713 GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* * * * * *
15765263 TTTTCCGGCGATGGTGTCCC-GACGAAGAAAAATACGGCACCAGCGCTTGCTCGAGCTCAGCATG
778 TTCTCCGACGATGGTGTCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
15765327 TGCTGCCGAAACCCACGATCCGGCCCAATCTTAGACTAAGAATGAACTCCGTATGCATAGACTGA
842 TGCTGCCGCAACCCTCG-TCCGG--------T---C------TG-A-T-C---T---TAGACTGG
15765392 GAATGAACTC
880 GAATGAACTC
* * * * *
15765402 CGTATGCATAGACTGAGAATGAACTCCGTATGTCTAAGTCAACCCACGAAACGAGCGTGCAGGCA
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
** * * * *
15765467 CTCAGCAAGCCAGAGGGGTGGGATGCACAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGAGCTG-
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * *
15765531 TCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAAACTGGGAATGAACTCCGTATGCCT
131 T-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
15765596 AAGCAAACTGACGAAACGA----GTGGACGGGTGGGCACTACGTCGGCCAGAGAGGCGGGATGCG
195 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCG
* *
15765657 CAAGCCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTATGCCAAT
260 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
*
15765722 GCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
325 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * *
15765787 AGACGACTCGTTTTTTATTTTTCACGA-TTTTGAAAACATTTTACGGTTT-GAGATTTTTTAAAA
390 AGACGACTCGTTTTCTATTTTTCATGATTTTTG-AAACTTTTTACGGTTTAG-GATTTTTTAAAA
*
15765850 TTCTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
453 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * * *
15765915 ACAAAAACATTCAGCTAAAAAATC-AATGTGTACAAGATTTTGTGACCATTGGAAAAAAGTATCC
518 ACAAAAAAATTCAGCTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
15765979 CCATTTTAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATTTCAAATGCTCTTTAAGGCG
582 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * *
15766044 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGCGCTACTATAAGGGCCAAGTACCAGCACCCAT
647 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
15766109 CGTACATCACGTGCGCACACTCCCTCGGCCCCCCCGATCGCCGGAACCCCAATGTCGCCGGTCAG
712 CGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* ** * * *
15766174 GTTCTCCGACGACGGTGTCCTGGCGAAGAAAAATATGACACCAGCACATGCTCGAGCCCAGCATG
777 GTTCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* *
15766239 TGCTGCTGTAA-CC-C-T-C-G---G----T---CT-GG--T---CT-
842 TGCTGCCGCAACCCTCGTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * **
15766265 -G-AT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGATG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * *
15766327 CTCAACCGACCAGAGGGGCAGGATGCGCAAGCCGGGGATC-GACTGGGTCCCCCTCTGCGTG-TC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCT-
* * * * ** *
15766390 ACCGATCCTGCTGCAGTAACCCTCGGTTTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCC
129 GCTGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* *
15766455 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGGCGGGATGC
194 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGC
*
15766520 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTGCCATGCCAA
259 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAA
* *
15766585 TGCTATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
324 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
15766650 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTT-GAGATTTTTTAAAA
389 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAG-GATTTTTT-AAA
* ** * * *
15766714 AATTTTT-AGAAGGCCTTTTGGCCCCAAACATGGTAGACGTGATCCATATATTTTTGTTGGCATG
452 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
15766778 CAAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
517 C-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * * *
15766843 CCCATTTTAGACACTTTAATGGCTCCTCGCAGCAAACCTGAAAAATCTCAAATGCCCTTTAAGGG
581 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
15766908 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
646 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * *
15766973 TCACACATGATGTGCGCACA-CCCCCCGGCCCCCCCGATTGCCGAAACCCCAATGCCGAGCGGGC
711 TCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCG-CCGGTC
* * * * * * * * * *** *** * **
15767037 GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATA-GG--GTGGTAGGTGG
775 AGG---TTCTCC-G--A-CGATG-GTG-T-C-CCAGCGA-AGAAAAATACGGCACCAGCACAT-G
**** ** * * * ** ** * *
15767099 GTTTAGGCACATCTTCATATTTCTGCCACGCCAATGCCATTTTTTTGG-CTTGTAAATTCATACA
827 CCCGA-GC-C--CAGCAT-GTGCTG-C-CG-CAA--CC-CTCGTCCGGTC-TG---A-TCTTAGA
* *** * *
15767163 ATGGTCCCTTAA-GC
876 CTGG-GAATGAACTC
* * * ** * ** ** ***** *
15767177 CTTCATG-TGAAGTTTCATGTCAA-GACGACT-CAT-TTTCTATTTTTCACGATTTTTGAAAC-T
1 CGT-ATGCT-TAG--AC-TGGGAATGA--ACTCCGTATGCCTA--AGTCA--ACCCACGAAACGA
*** * * *** ** * *** ** ** * *
15767237 TTTTACGGTGAAGAAAAATACGACACTAGCACATGCCCGA-GCGC-AGCATGTG--CTGTC--G-
55 GCGTGCGG-G-CG-CTCAGCCGGC-C-AG-AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
* * * * * * **
15767295 CAACCCTC-G-GTCCGGTTGGATCTTAGACTG--GGAA---T--GAAC--TCTGTATGCTTAGAC
114 C-CCCCTCTGCGTGCTGCT-GATCCT-G-CTGCCGCAACCCTCGGTCCGGTCTG-AT-CTTAGAC
* * * * * *
15767349 TGGGAATGAACTCTGTATGCCTAAGTCAACCCACAAAACGA--GTGC--GCGGGC--GCTC-A-G
173 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* ** * * * * * * ****** * *
15767406 CCAACCTGAGGGGCGAGATACGAAAGCCAG-GGATCGATCGGGTCCCCCTCTGCGTGCT--GC-C
238 TCGGCCAGAGAGGCGGGATGCGCAAGCC-GTGGATCGATAGGGT-GGTAGGTGGGT-TTAGGCAC
** * * ** * ** * * * * ** ** * *
15767467 GATCTTGTTGTTGCAACCCTCAGTCCGGT-TCAATCTTC-GAC-TGGGAATGAACTCCGTAT-G-
300 -ATCTTCATATTTCTGCCAT--G-CCAATGCCATTTTTCTGGCTTGTAAATTCA-TAC-AATGGT
** * *** ** * * ****
15767527 -CC-TAAGCCAACCGACGATACGAGCAGACGGGCGGGCGGGCACTACGCCGGC-CAGAGAGGCGG
359 CCCTTAAGCC-TTC-ATG-T--GA--AG--TTTC---ATGGCA--A-GACGACTC-G-TTTTC--
* *** * ** * *** ** * ** * * * **
15767589 GATGCGT-AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTTCTACCG
405 TATTTTTCATG--AT-TTTTGA-AACTTTTTA---CGGTTTAGG-ATTTTTTAAAATTT-TTTC-
* * * *** ** * * * ***
15767653 GGCCAATGCCATCTTTCTGGCTTGTAAA-TTCATACA-ATGGTCCCTTAAGCCTTCATGTGAAGT
460 AG--AA-G-GA-GTTT-TGGC-CCCAAACTTGGTAGACGTGAT-CCTT--G---T-AT-TTTTGT
* * * ** * * * **** * ** * *
15767716 T-TCATG-GCAAGACCACTC-GTTTTTTATTTTTC-AAGATTTTTGA-AACTTTTTACGGTTCAA
510 TGGCATGCACAAAAAAATTCAG---CTAAAAACTCGAAG---TGT-ACAAGATTTT---G-TGAC
* *** * * * * * * * *
15767776 GATTTTTTAAAA-T-T----TTTTCAAAAGGAGTTTTA-GCCCTAACTTGGTAGACGAGATCCTT
564 CATTTGAAAAAAGTGTCCCCATTTC-AGA-CACTTTAATG-GCT-AC-TGGCAG-C-A-AACC-T
*** *** * *** ****** * ** * * ** *
15767834 GTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAATCTCGAAGTGT-AT-A-GGATTTTGTG
620 GTA-AAATC-TCAAATGCTCTTTAAGGGGGTG-TGAGTTCTCGAGGTTTGATGAGGGA-TAGGGG
* * ** * * * ***
15767896 ACC-ATTTGAA---AAAAGT----GTC-CCCATTTCAGACACTTTAATGGCTACTGGCA-ACAAA
681 GCCAATAT-AAGGGCCAAGTACCAG-CACCCA--TC-G-CAC-ATCAT-G-TGC--GCACACCCC
* ***** *** * ** ***** ** *
15767951 CCTGTAAAATCTTAATTGCTCTTTAA-GGGGGTGTGAGCTC--TCAAGGTT-T--GATGA-GG-G
735 CCCG-GCCCCCCCGATCGC-C-GGAACCCCAATG-CCGC-CGGTC-AGGTTCTCCGACGATGGTG
** * * * * * * * * *
15768008 AT---AG-GGGGTCAATATAAGTGC-CAAGTACCA-GCACCCATCGCACATCATGTCCGCGCGCC
794 -TCCCAGCGAAG-AAAAATACG-GCACCAGCA-CATGC-CCGA--GCCCAGCATGT--GC-TGCC
* * ** * * *
15768067 GGAACCCCAATGCCGT-CGGT-TAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATAC
849 GCAA-CCC--T--CGTCCGGTCT--GATCTTAGAC--T-G-G----GA--ATG--AACT-C
* * * ** * ** * ** ** **
15768126 AGCACCAGCACATGCCTGAGCGCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
1 CGTA--TGCTTA-GACTG-G-G-A--ATGAACT-CCGTATGCCTAAGT-C-AACC---C----AC
* * * * * * *** ** *
15768191 TGGGAATGAAC-TCCGTATGC-CTAAGTCAACCCACGAAACGAGCGTGCGGGCACCCAGTC-GGC
48 --GAAACGAGCGTGCG--GGCGCTCAG-CCGGCCA-G--A-G-G-G-GCGGG-ATGC-G-CAAGC
* * * ** * * **
15768253 CAGAGGG-GCTGGATGCGCAAGTCGACGATCGGTCGAGTTCCCCTCTGCGTGCTATCGATCCTAT
98 C-G-GGGATC-GG-T-CG--GGTC-CCCCTC--T-GCG-T----GC----TGC--T-GATCCTGC
* * *
15768317 TGCCGCAACCCTCCGTTCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCG
140 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * *
15768382 ACAAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCACAAGCCGTGG
205 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
*
15768447 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAG-CATGGCAATGCCATTTTT
270 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCCATGCCAATGCCATTTTT
*
15768511 CTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
334 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * *
15768576 GTTTTCTATTTTTCATGTTTTTTGAAACTTTTTACGG-TTCGAGATTTTTTTAAATTTTTCCAGA
399 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAG-GATTTTTTAAAATTTTTTCAGA
** * * * *
15768640 AGGAGTTTTTACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCATAAAAAATT
463 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * * *
15768705 TCAGCTAAAATCTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTTAGAC
528 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
15768770 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGTTCT
593 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* ** *
15768835 CGAGGTTTGATGAGGGATAGGGGGCCAAAATAAGGGCCAAGTACCAGCACCCATCATAGATCATG
658 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * ** * * * * *
15768900 CGCGAACACCCCCCTGGCCCCCTTGATCGTCGGAACCCCAATGTCGCTGGGCAGGTTCTCCGGCG
723 TGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
* * *
15768965 ATGGTGTCCCAGCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAA
788 ATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* *
15769030 CCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTC
853 CCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * *
15769068 CCTATGCTTAGACTGGGAATGAACTCCGTATGACTAAGTCAACCCACGAAACGAGTGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * *
15769133 CTCAGCCAGCCAGAGGGGCGGGATGTGCAAGCCGAGGATCGGTCGGGTTCCCCTCTGTGTGCTGC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
** * * * *
15769198 CAATCTTGCTGCTGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAACGAACTCCGTATGCCTA
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
15769263 AGTCAACCAACGAAACGAGCGGGCGGGCGGACGAGCACTACGTCGGCAAGAGAGACGGGATGCGC
196 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
* * *
15769328 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGCCGTGGCAATG
261 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
* *
15769393 CCATTTTT-TGGCTTGAAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCAA
326 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* ** *
15769457 GACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAAGTT
391 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAATTT
* *
15769522 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTATTGGCATGCACA
456 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * *
15769587 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTAACCATTTGAAAAAAGTGCCCCCAT
521 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
15769652 TTAAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
586 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
** * * *
15769717 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATACTGGCCAAATACCAGCTCCCATCACA
651 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * *
15769782 CATCATGTGCACACACCCCCCC-GCCCGTCCCGATCGCCGGAA-CCCAGTGCCGTCAGTCAGGTT
716 CATCATGTGCGCACACCCCCCCGGCCC-CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
** * *
15769845 CTCCGGTGATGGTGTCCC-GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTG
780 CTCCGACGATGGTGTCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * *
15769909 CTGCCACAACCCTCAGTCTGATCCGATCTTAGACTGGGAATGAACTC
844 CTGCCGCAACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTC
*
15769956 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* *
15770021 CTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTTCCCCTCTGCGTGCTGC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * * * *
15770086 CGATCTTGCTGCTGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAACGAACTCTGTATGCCTA
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
15770151 AGTCAACCGACGAAACAAGCGGGCGGGCGGGCGGGCGGGCGGGCACTATGTCGGCAAGAGAGGCG
196 AGCCAACCGACG--A-AA-----CGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG
* * *
15770216 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACACCTTCATATTTCTACCA
253 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* *
15770281 TGGCAATGCCATTTTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
318 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * **
15770345 CAAGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTT
383 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTT
* * *
15770410 TTAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTATTGG
448 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* *
15770475 -ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTAACCATTTGAAAAAAGT
513 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * * * *
15770539 GTCACCATTTTAGACACTTTAATGGCGACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTAA
578 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
15770604 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAGGTACCAGCAC
643 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * * *
15770669 CCAACGTACATCATGTGCCCACACCCCCCCGG-CCCCCCGATCGCTGGAACCCTAAT---G-CGA
708 CCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGG
* * **
15770729 T--GG-TGT-C--C-----TG----A-CGAAGAAAAATGCGGCACCAGCACATGCCCGAG-TTAG
773 TCAGGTTCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
* * *
15770777 CATGTGCTACCGCAACCCTCGGTCCGGTCCGATCTTAGACAGGGAATGAACTC
838 CATGTGCTGCCGCAACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * *
15770830 CGTATGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACCCTCGAAACGAGCGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * *
15770895 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGAGGATCGGCCGGGTCCCCTTCTGCGTGCTGC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
** * ** * * * *
15770960 CAATCCTACTGCTACAACCC-CTAGACCAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCT
131 TGATCCTGCTGCCGCAACCCTC-GGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
** * * *
15771024 AAGCCAACCGACGAAACGAGCGGGCACGCGGGCGGGCACTACGCCAGCCAGAGAGGAGGGATGCG
195 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCG
** * * *
15771089 CAAGCCGTGGATCGATAGGGTGGTAGGAAGGTTTAGGCACATCTTCATATTTCTGTCGTTCCAAT
260 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
* * * *
15771154 GTCATTTTTTTTGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCA
325 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
** *
15771219 AGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCAGGATTTTTTAAAATT
390 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAATT
* * *
15771284 TTTTCAAAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTTGGCATGCA
455 TTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCA
* * * **
15771349 CTAAAACATTCAGCTAAAAACTCAAAGTGTACAATTTTTTGTGACCATTTGAAAAAAGTGTCCCC
519 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
15771414 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATATCAAATGCTATTTAA-GGGGT
584 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * *
15771478 GTGAGTTCTCAAGATTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCGGCACCCATCG
649 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * **
15771543 TACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATATCGCCGGTCAGGT
714 CACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGT
* **
15771607 TGTCC-AGCGATGGTGTCCC-GACGAAGAAAAATACGGCACCAGCACATAACCGAG-CCA--ATG
779 TCTCCGA-CGATGGTGTCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
*
15771667 TTTGCTGCCACAA-CC-C-T-C-G---G----T---CT--G---G---TC
842 --TGCTGCCGCAACCCTCGTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * * *
15771694 CG-AT-CTTAGACTGGGAAAGAACTCCGTATGCCTAAGTTAACCCACGAAATGAGCGTGCAGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* ** * * * * *
15771757 CTCAGCTGGTAAGAGGGGTGGGATGCGCAAGTCGCGGATCGGCCGGGTCACCCTCTGCGTGCTG-
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * * * * *
15771821 TCGATCTTGCTGCTGCAACCCTAGGTCTGGTCTGATGTTAGA-TTGGAATGAACTCCGTATGCTT
131 T-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* *
15771885 AAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCG
195 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCG
* * * *
15771950 CAAGCCGTGGATCAATAGGGTGGTAGGTGTGGGTTTAGGCACATCTTCATATTTGTTCCGTGCCA
260 CAAGCCGTGGATCGATAGGGTGGTA-G-GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
* * * *
15772015 ATGCCATTTTTCTAGCCTGTAAATTCATACAATGGTCCCTTACGCCTTCATGTAAAGTTTCATGG
323 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* ** * * *
15772080 CAAGACGACTCGTTTTTTATTTTTCACAATTTTTAAAACTTTTTAAGGTTCAGGATTTTTTAAAA
388 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAA
* *
15772145 TTTTTTCAGAAGGTGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
453 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* *
15772210 ATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCC
518 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
15772275 TATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTTAAAGGGG
583 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
15772340 TGTGAGTTCTCAAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATA
648 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
15772405 GCACATCATGTGCGCCCACCACCCCCGGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAG
713 GCACATCATGTGCGCACACC-CCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* ** * *
15772470 GTTCTTCGGTGATGGTGTCCCAACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACATG
777 GTTCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
15772535 TGCTGCCGCAA-CC-C-T-C-G---G-TC-----C--GG--T---CT-
842 TGCTGCCGCAACCCTCGTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * *
15772561 -G-AT-CATAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCGCGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * * *
15772623 CTCAGCCTGCTAGAGGGGCGGGATGTGCAAG-CGAGGGATTGGTCGGGTCCCGCTTTGCGTGCT-
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG-GGGATCGGTCGGGTCCCCCTCTGCGTGCTG
* * * * *
15772686 ATCGATCCTGCTGCCGTAACCCTTGGTTCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCC
130 CT-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * * * *
15772751 TAAGTCGACCGACGAAATGAGCGGGCGGGCGGGCAGGCACTACATCGACTAGAGAGGAGGGATGC
194 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGC
** *
15772816 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCGTGCCAA
259 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAA
* *
15772881 TGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCGCTTAAGCCTTCATGTGAAGTTTCATGGC
324 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
* * ** * ** * * *
15772946 AAGACGACTCGTTTTTTATTTTTTACAATTATCAAAAATTTTTACGG-TTCGAGATTTTTTTAAA
389 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAG-GATTTTTTAAAA
* * * * *
15773010 -TTTTTAATAAAGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATCC
453 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * *
15773074 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTTCAAGATATTGTGACCATTTGAAAGAAGTGTCCC
518 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
15773139 CATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGG
583 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
15773204 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATAAAAGGGCCAAGTACCAGCACCCATC
648 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *** * *** ** ** *
15773269 GCACATCATGTGCGCACGA---TCTTAG--ACTAGGAAT-----GAACTCCGTATGGTTAGACTG
713 GCACATCATGTGCGCAC-ACCCCCCCGGCCCCCCCG-ATCGCCGGAAC-CCCAAT-G-CCG-CCG
** **** * * * ** *** **
15773324 GGAATAAACTCCGTATGCCTAAGTCAACCCA-CGAA-ACGAGCGTACGGGCGTTCAGC-CA-GCC
772 GTCAGGTTCTCCG-ACG-AT-GGT-GTCCCAGCGAAGA--AAAATAC-GGC-ACCAGCACATGCC
* **** * * ** * * ** **
15773385 AGAGGGGTGGGATGTGCAAGCCG-AA-GATAGATCGGGTCCCCTTCTACGTGTACCGATTCTGCT
829 CGA-GCCCAGCATGTGC-TGCCGCAACCCTCG-TCCGGT---CTGAT-C-T-TA--GA--CTGGG
**
15773448 ACCGCAACCCTC
881 AATG-AA--CTC
* * * * *
15773460 AGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGTTAACCCACGAAATGAGCGT
1 -----CGTATG--CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* ** * * *
15773525 ACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCATAAACCGGGGATCGGTCAGGTCCCCCTCTAC
59 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGC
* * ** * ** * *
15773590 GTGCTG-TCGATCCTACTGTCATAACCCTCAGTCCGGTCCAATCTTAGACTAGGAATGAACTCTG
124 GTGCTGCT-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * *
15773654 TTTGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGGTG
188 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG
* *
15773719 GGATGCGCAAGCCGTGGATCGATAGGGTGATAGGTGAGTTTAGGCACATCTTCATATTTCTGCCA
253 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* *
15773784 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATAGAATGGTCCCTTAACCCTTCATGTGAAGTTT
318 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * *
15773849 CACGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTAAGGATTTTT
383 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTT
* * * *
15773914 TAAAATTTTGTCAGAAGGACTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTTTTGG
448 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* *
15773979 CATGCACAAAAAAATTCAGCCAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGT
513 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * * *
15774044 GTCCCCATTTCAGACACTTTAACGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCCCGTTAA
578 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
15774109 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
643 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * ** *
15774174 CCATTGCACATCATGTGTGCACA-CCCCCCGGCCCCCCCGATCGCTAGAACCCCAATGCCGTCGG
708 CCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGG
* * * *
15774238 TCAGGTTCTCCGACGATGGTGTCTCAGTGAAGAAAAATACGACACTAGCACATGCCCGAGCCCAG
773 TCAGGTTCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
**
15774303 CATGTGCTATCGCAA-CC-C-T-C-G---G----T---CT-GG--T---CT-
838 CATGTGCTGCCGCAACCCTCGTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * * *
15774333 -G-AT-CTTATACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACTAGCGTGCGGACG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * ** * *
15774395 CTCAGTCGACCAAAGGGATGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTACTG-
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * * * * * *
15774459 TCGATCTTGCTACCGGAACCCTCGGTTCAGTCTGATCTTAGACTAGGAATGAACTCCATATGCCG
131 T-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
15774524 AAGCCAACCGACGAAATGAGGGGGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATGCG
195 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCG
* ** *
15774589 CATGCCGCAGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
260 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
* * * *
15774654 GCCATTTTTCTAGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTAATCTGAAGTTTCATGGCA
325 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * * *
15774719 AGACGACTCGTTTTCTTTTTTTCACGATTTTTGAAACATTTTACGG-TTCGAGATTTTTTAAAAT
390 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAG-GATTTTTTAAAAT
* *
15774783 TTTTTCAGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCA
454 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
15774848 CAAAACAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
519 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
15774913 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGT
584 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *** * *
15774978 GTGAGTTCTTGAGGTTTGATGAAGGATAGGATACCAAAATAACGGCCAAGTACCAGCACCCATCG
649 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * * * *
15775043 TACATCATGTTCGCACACCCCCCATGG-CCCCCCGACCGTCGGAACCCCAATACTGTCGGTCAGG
714 CACATCATGTGCGCACACCCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* * *
15775107 TTCTCTGGCGATGGTGTCCC-GACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATG
778 TTCTCCGACGATGGTGTCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * *
15775171 TGCTGCTGCAAACCTCGGTCCGGT-TCAATGTTATACTAGGAATGAACTC
842 TGCTGCCGCAACCCTC-GTCCGGTCT-GATCTTAGACTGGGAATGAACTC
* * *
15775220 CGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCAGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * ** *
15775285 CTCAGCCGGCCAGAGGGGAGGGATGCGCAAGTCGGGGATCGACCGAGT---CC-C--C-T-CTG-
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * *
15775341 TG----TGCTGCCACAACCCTCGGTCTGGTCTGATCTCAGACTGGGAATGAACTTCGTATGCCTA
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* ** * * * *
15775402 AACCAACCGACGAAACGAGCGATCGGGC-GGCTAGGCACTACATCGGCCAAAGAGGCGGGATACG
196 AGCCAACCGACGAAACGAGCGGGCGGGCGGGC-GGGCACTACGTCGGCCAGAGAGGCGGGATGCG
*
15775466 CAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
260 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
**
15775531 GCCATTTTTCTATCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
325 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * * *
15775596 AGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG-TTCGAGATTTTTTAAATT
390 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAG-GATTTTTTAAAAT
** * *
15775660 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTTTTAGACGTAATCCTTGTATTTTTTTGTGGCATGC
454 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGC
* * * *
15775725 ACAAAAACATTCAGCAAAAAACTCGAAGCGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
518 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
15775790 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCACATGCTCTTTAAGGGGG
583 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
15775855 TGTAAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCGTT
648 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * ** *
15775920 GCACATTATGTGCGTACACCCCCCCCCGACCCCTTCGATCGTCGGAACCCCAATGCCGCCGGTCA
713 GCACATCATGTGCG--CACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCA
* ** *
15775985 CGTTCTCCGACGATGGTGTCCC-GACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCAAGCA
776 GGTTCTCCGACGATGGTGTCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * * *
15776049 TATGCTGCTGCAACCTTCGATCTGGTCTGATCTTAGACTGGGAATGAACTC
840 TGTGCTGCCGCAACCCTCG-TCCGGTCTGATCTTAGACTGGGAATGAACTC
* * *
15776100 CGTATGCTTAGACTGGAAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAACGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * * * *
15776165 CTCAGCCGGCCAGAGGGGTGGGATACGCAAGCTGAGGATCGATCAGGTCCCCCTCTGCGTGTTGC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * ** * *
15776230 CGATCCTGCTGCCGCAACCCTCGATCTAGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTG
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
15776295 AGCCAACCGACGAAATGGGTGGGTGACGGACGGGTAGGCGGCACTACGTCGGCCAAAGAGGCGGG
196 AGCCAACCGACGAAACGAG-CGG-G-CGGGCGGG--CG-GGCACTACGTCGGCCAGAGAGGCGGG
* * * *
15776360 ATGCGCAAGCCGCGGAGCGGTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG
255 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
* *
15776425 TCAATGCCATTTTTCTGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
320 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* ** * *
15776490 TGGCAAGACGACTCGTTTT-TGATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATGTTGT
385 TGGCAAGACGACTCGTTTTCT-ATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTT
* * * *
15776554 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCATTTTATTTTTATTGGC
449 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* * **
15776619 ATGCATAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCA
514 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
*
15776684 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAACATCTCAAATGCTCTTTAAG
579 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
*
15776749 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACC
644 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * *
15776814 CATCGCACACCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCTGCCGGT
709 CATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGT
* * * *
15776877 CAGGTTCTCCGATGATGGTGTCCC-GACGAAGAGAAATACAGTACCAGCACATGCCCGAGCCCAG
774 CAGGTTCTCCGACGATGGTGTCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
* ** *
15776941 CATGTGCTACCATAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTC
838 CATGTGCTGCCGCAACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTC
* * * * *
15776994 CGTATGCTTAGATTGGGAATGAACTTCGTATGCCCAAGTGAACCCATGAAACGAGCGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * *
15777059 CTCAGCTGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTAC
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* ** * ** * *
15777124 CGATCCTGCTATCGTAACCCTCAATCCAGTCTGATCTTAGACTGGGAATGAAATCCGTATGCCTA
131 TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
15777189 AGCAAACCGAGGAAACAAGCGGGCGAGTGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGC
196 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
* * * *
15777254 AGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTGTCGTGCCAATG
261 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
*
15777319 CCATTTTTCTGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
326 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
** * * *
15777384 GACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTATTACGGTTCAAGATTTTTTAAAATTT
391 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAATTT
* * *
15777449 TTTCAGAAAGAGTTTTGGCCCCAAACTAGGTACACGTGATCCTTGTATTTTTGTTGGCATGCACA
456 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * *
15777514 AAACAATTCAGCAAAAAACTTGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCAT
521 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
15777579 TTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTAAAATGCTCTTGAAGGGGGTGT
586 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
15777644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGCCCAAGTACCAGCACCCATCGCA
651 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** * * ***
15777709 CATCATGTGCGTACA-CCCCTTGG-CCCCCC-ATTCGCCGGAACCCTAATGTCATTGGTCAGGTT
716 CATCATGTGCGCACACCCCCCCGGCCCCCCCGA-TCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* ** * *
15777771 TTCCGGTGATGGTGT-CCAGGTGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTG
780 CTCCGACGATGGTGTCCCA-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * *
15777835 CTGTCGTAACCCTCAATCCGGTTTGATCTTAGACTGCGAATGAACTC
844 CTGCCGCAACCCTC-GTCCGGTCTGATCTTAGACTGGGAATGAACTC
* *
15777882 TGTATGCTTAGACTGGGAATGAACTCCGTATGACTAAGTCAA-CC-CGAAACGAGCGTGCGGGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * * * *
15777945 CTCAGCTGACCAGAAGGGCAGGATGGGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTG-
66 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * ** *
15778009 TCGATCCTGCTGTCGCAACCCTTGGTCCAGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCT
131 T-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
** * ** *
15778074 AAGCTGACCGATGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGACCAGAGAGGCGGGA
195 AAGCCAACCGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
* *
15778139 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTAC
256 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
* *
15778204 CAATGCCATTTTTCTGGCTTGTACATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCAT
321 CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * **
15778269 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTGACGGTTCGGGATTTTTTAA
386 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAA
* ** *
15778334 AATTTTTTTAGAAGGAGTTTTAACCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTGGCAT
451 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* *
15778399 GCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAATATTTTGTGACCATTTGAAAAAAGTGTC
516 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * ** *
15778464 TCCATTTCAGACACTGTAATGGCTACTGATAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGG
581 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* ** * *
15778529 GGTGTGAGTTCTCAAGGTTTGATGATAGATAAGGGGCCAATATAAGGGACAAGTACCAGCACCCA
646 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * *
15778594 TCACCCATTATGTGCGCACACCCCCTGTCC--CCCCCCCGATCGCCGGAACCCTAATGTCGCTGG
711 TCGCACATCATGTGCGCACACCCCC---CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGG
* * *
15778657 TCAGGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
773 TCAGGTTCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
* ** * *
15778722 CATGTGCTGCCGTAACCCTCGTTCCGGTCCAATCTTAGACTAGGAATGAACTG
838 CATGTGCTGCCGCAACCCTCG-TCCGGTCTGATCTTAGACTGGGAATGAACTC
* * *
15778775 TGTATGCTTAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCG
1 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
15778832 GGAGGGCAGG
Statistics
Matches: 12569, Mismatches: 2028, Indels: 1253
0.79 0.13 0.08
Matches are distributed among these distances:
855 3 0.00
856 4 0.00
858 1 0.00
859 12 0.00
860 174 0.01
861 110 0.01
862 274 0.02
863 926 0.07
864 675 0.05
865 459 0.04
866 269 0.02
867 272 0.02
868 118 0.01
869 120 0.01
870 4 0.00
871 4 0.00
872 8 0.00
873 4 0.00
874 243 0.02
875 41 0.00
876 12 0.00
877 338 0.03
878 196 0.02
879 9 0.00
880 331 0.03
881 17 0.00
882 479 0.04
883 12 0.00
884 3 0.00
886 151 0.01
887 12 0.00
888 986 0.08
889 383 0.03
890 1722 0.14
891 16 0.00
892 2 0.00
893 243 0.02
894 334 0.03
895 233 0.02
896 297 0.02
897 4 0.00
898 207 0.02
899 253 0.02
900 3 0.00
901 1 0.00
902 3 0.00
903 3 0.00
905 13 0.00
906 210 0.02
907 62 0.00
908 28 0.00
909 416 0.03
910 734 0.06
911 26 0.00
912 97 0.01
913 19 0.00
914 9 0.00
915 49 0.00
916 7 0.00
917 10 0.00
918 8 0.00
919 9 0.00
920 22 0.00
921 19 0.00
922 19 0.00
923 8 0.00
924 11 0.00
925 9 0.00
926 10 0.00
927 5 0.00
928 1 0.00
929 10 0.00
930 6 0.00
931 2 0.00
932 2 0.00
933 8 0.00
934 7 0.00
935 1 0.00
936 3 0.00
937 12 0.00
938 21 0.00
939 20 0.00
940 10 0.00
941 6 0.00
942 10 0.00
943 7 0.00
944 16 0.00
945 10 0.00
946 21 0.00
947 9 0.00
948 11 0.00
949 5 0.00
950 21 0.00
951 9 0.00
952 13 0.00
953 15 0.00
954 17 0.00
955 27 0.00
956 11 0.00
957 5 0.00
958 16 0.00
959 11 0.00
960 25 0.00
961 21 0.00
962 29 0.00
963 12 0.00
964 13 0.00
965 30 0.00
966 6 0.00
967 9 0.00
968 5 0.00
969 22 0.00
970 3 0.00
971 13 0.00
972 10 0.00
973 7 0.00
974 2 0.00
975 1 0.00
976 1 0.00
977 3 0.00
978 10 0.00
979 7 0.00
980 6 0.00
981 1 0.00
982 2 0.00
984 2 0.00
985 4 0.00
986 13 0.00
987 3 0.00
990 5 0.00
991 3 0.00
992 1 0.00
993 3 0.00
994 5 0.00
995 1 0.00
996 14 0.00
997 2 0.00
999 5 0.00
1001 47 0.00
1002 3 0.00
1003 7 0.00
1004 2 0.00
1005 6 0.00
1006 4 0.00
1007 13 0.00
1008 11 0.00
1009 53 0.00
1010 4 0.00
1011 6 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (889 bp):
CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
TGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGGATTTTTTAAAATTT
TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
TCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
GCCGCAACCCTCGTCCGGTCTGATCTTAGACTGGGAATGAACTC
Found at i:15764512 original size:26 final size:26
Alignment explanation
Indices: 15764476--15764528 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15764466 CTGGTCTAAT
*
15764476 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15764502 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15764528 C
1 C
15764529 CTGAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15765387 original size:26 final size:26
Alignment explanation
Indices: 15765358--15765433 Score: 143
Period size: 26 Copynumber: 2.9 Consensus size: 26
15765348 GGCCCAATCT
*
15765358 TAGACTAAGAATGAACTCCGTATGCA
1 TAGACTGAGAATGAACTCCGTATGCA
15765384 TAGACTGAGAATGAACTCCGTATGCA
1 TAGACTGAGAATGAACTCCGTATGCA
15765410 TAGACTGAGAATGAACTCCGTATG
1 TAGACTGAGAATGAACTCCGTATG
15765434 TCTAAGTCAA
Statistics
Matches: 49, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 49 1.00
ACGTcount: A:0.36, C:0.18, G:0.22, T:0.24
Consensus pattern (26 bp):
TAGACTGAGAATGAACTCCGTATGCA
Found at i:15767352 original size:26 final size:26
Alignment explanation
Indices: 15767316--15767368 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15767306 CCGGTTGGAT
15767316 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15767342 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15767368 C
1 C
15767369 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15769084 original size:26 final size:26
Alignment explanation
Indices: 15769048--15769099 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15769038 CCGATCCGAT
15769048 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
*
15769074 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
15769100 ACTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:15769965 original size:26 final size:26
Alignment explanation
Indices: 15769936--15769988 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15769926 CTGATCCGAT
15769936 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15769962 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15769988 C
1 C
15769989 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15770178 original size:4 final size:4
Alignment explanation
Indices: 15770169--15770194 Score: 52
Period size: 4 Copynumber: 6.5 Consensus size: 4
15770159 GACGAAACAA
15770169 GCGG GCGG GCGG GCGG GCGG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GC
15770195 ACTATGTCGG
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 22 1.00
ACGTcount: A:0.00, C:0.27, G:0.73, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:15770839 original size:26 final size:26
Alignment explanation
Indices: 15770810--15770862 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15770800 CCGGTCCGAT
*
15770810 CTTAGAC-AGGGAATGAACTCCGTATG
1 CTTAGACTA-GGAATGAACTCCATATG
15770836 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
15770862 C
1 C
15770863 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.32, C:0.21, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:15772120 original size:863 final size:862
Alignment explanation
Indices: 15767342--15778773 Score: 12552
Period size: 888 Copynumber: 13.0 Consensus size: 862
15767332 ACTCTGTATG
* * * *
15767342 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACAAAACGAGTGCGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
*** * * * * * * * *
15767407 CAACCTGAGGGGCGAGATACGAAAGCCAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCT
66 TGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCTCTGCGTGCTGTCGATCC
* * * * *
15767472 TGTTGTTGCAACCCTCA-GTCCGGT-TCAATCTTCGACTGGGAATGAACTCCGTATGCCTAAGCC
130 TGCTGCTGCAACCCT-AGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
15767535 AACCGACGATACGAGCAGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGTAAGC
193 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
* * * **
15767600 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTTCTACCGGGCCAATGCCAT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* *
15767665 CTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACC
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * *
15767730 ACTCGTTTTTTATTTTTCAAGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTC
388 ACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTC
* * * * *
15767795 AAAAGGAGTTTTAG-CCCTAACTTGGTAGACGAGATCCTTGTATTTTTCTTGGCATGCACAAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
15767859 AATTCAGCTAAAATCTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
15767924 GACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTTAATTGCTCTTTAAGGGGGTGTGAGC
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
15767989 TCTCAAGGTTTGATGAGGGATAGGGGGTCAATATAAGTGCCAAGTACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *
15768054 ATGT-----------CC-G------CG--CGCCGGAACCCCAATGCCGTCGGTTAGGTTCTCCGG
713 ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGG
* * *
15768099 CGATGGTGTCCCGACGAAGAAAAATACAGCACCAGCACATGCCTGAGCGCAGCATG-TGCTGCCG
778 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CATGTTGCTGCCG
*
15768163 CAACCCTCGGTCCGGTCCGAT
842 CAACCCTCGGTCTGGTCCGAT
* *
15768184 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACCCAG-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * *
15768248 TCGGCCAGAGGGGCTGGATGCGCAAGTCGACGATCGGTCGAGTTCCCCTCTGCGTGCTATCGATC
66 T-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG-GGTCCCCTCTGCGTGCTGTCGATC
** * ** *
15768313 CTATTGCCGCAACCCTCCGT-TCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCC
129 CTGCTGCTGCAACCCTAGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
15768377 AACCGACAAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCACAAGC
193 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
*
15768442 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAG-CATGGCAATGCCA
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCCATGCCAATGCCA
*
15768506 TTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
322 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * * *
15768571 GACTCGTTTTCTATTTTTCATGTTTTTTGAAACTTTTTACGGTTC-GAGATTTTTTTAAATTTTT
387 GACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTT
* ** * * *
15768635 CCAGAAGGAGTTTTTACCCCAAACCTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCATAAA
451 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * * *
15768700 AAATTTCAGCTAAAATCTCGAAGTGTATAGGATTTTGTGACCATTTGAAAAATGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
15768765 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* ** *
15768830 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAAATAAGGGCCAAGTACCAGCACCCATCATAGA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * ** * *
15768895 TCATGCGCGAACACCCCCCTGGCCCCCTTGATCGTCGGAACCCCAATGTCG-CTGGGCAGGTTCT
711 TCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCT
* *
15768959 CCGGCGATGGTGTCCC-AGCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATG-TGC
774 CCGGCGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CATGTTGC
* *
15769022 TGCTGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCCTAT
837 TGCCGCAA-CC-C--T-CG----G----T---CT--G---G---T-CCGAT
* *
15769073 GCTTAGACTGGGAATGAACTCCGTATGACTAAGTCAACCCACGAAACGAGTGTGCGGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
** * * * * *
15769138 CCAGCCAGAGGGGCGGGATGTGCAAGCCGAGGATCGGTCGGGTTCCCCTCTGTGTGCTGCCAATC
65 CTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG-TCCCCTCTGCGTGCTGTCGATC
* * * *
15769203 TTGCTGCTGCAACCCTCA-GTCCGGTCTGATCTTAGACTGGGAACGAACTCCGTATGCCTAAGTC
129 CTGCTGCTGCAACCCT-AGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
15769267 AACCAACGAAACGAGCGGGCGGGCGGACGAGCACTACGTCGGCAAGAGAGACGGGATGCGCAAGC
193 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
15769332 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGCCGTGGCAATGCCAT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* *
15769397 TTTT-TGGCTTGAAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCAAGACG
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * *
15769461 ACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAAGTTTTTC
388 ACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTC
* *
15769526 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTATTGGCATGCACAAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * *
15769591 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTAACCATTTGAAAAAAGTGCCCCCATTTAA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
15769656 GACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
** * * *
15769721 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATACTGGCCAAATACCAGCTCCCATCACACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
15769786 ATGTGCACACACCCCCCCGCCCGTCCCGATCGCCGGAA-CCCAGTGCCGTCAGTCAGGTTCTCCG
713 ATGTGCGCACACCCCCCGGCCC-CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * *
15769850 GTGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATG-TGCTGCC
777 GCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CATGTTGCTGCC
*
15769914 ACAACCCTCAGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTAT
841 GCAA-CC-C--TC-G----G----T---CT--G---G---TCCG-AT
*
15769961 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
** *
15770026 CCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTTCCCCTCTGCGTGCTGCCGATC
65 CTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG-TCCCCTCTGCGTGCTGTCGATC
* * * * *
15770091 TTGCTGCTGCAACCCTCA-GTCCGGTCTGATCTTAGACTGGGAACGAACTCTGTATGCCTAAGTC
129 CTGCTGCTGCAACCCT-AGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
15770155 AACCGACGAAACAAGCGGGCGGGCGGGCGGGCGGGCGGGCACTATGTCGGCAAGAGAGGCGGGAT
193 AACCGACG--A-AA-----CGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* * * *
15770220 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACACCTTCATATTTCTACCATGGC
250 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* *
15770285 AATGCCATTTTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAAG
315 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * *
15770349 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTTAA
380 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAA
* *
15770414 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTATTGG-ATG
445 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * *
15770478 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTAACCATTTGAAAAAAGTGTCA
510 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
15770543 CCATTTTAGACACTTTAATGGCGACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGG
575 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
15770608 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAGGTACCAGCACCCAA
640 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* *
15770673 CGTACATCATGTGCCCACACCCCCCCGG-CCCCCCGATCG-CTGG------AA--CC--C--T-A
705 CGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCA
* * * **
15770723 ----AT---GCGATGGTGTCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG-TTAGCAT
768 GGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CAT
* *
15770780 G-TGCTACCGCAACCCTCGGTCCGGTCCGAT
832 GTTGCTGCCGCAACCCTCGGTCTGGTCCGAT
*
15770810 CTTAGACAGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACCC
1 CTTAGACTGGGAATGAACTCCGTATGC-----CT---AA-G---T-CA-A--CC-----C-A---
* * * *
15770875 TCGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGAGGATCGGCCG
41 -CGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
* * * * * ** *
15770940 GGTCCCCTTCTGCGTGCTGCCAATCCTACTGCTACAACCCCTA-GACCAGTCTAATCTTAGACTG
105 GGTCCCC-TCTGCGTGCTGTCGATCCTGCTGCTGCAA-CCCTAGGTCTGGTCTGATCTTAGACTG
** *
15771004 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCACGCGGGCGGGCACTACGCC
168 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTC
* * **
15771069 AGCCAGAGAGGAGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGAAGGTTTAGGCACATCTT
233 GGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * * * * *
15771134 CATATTTCTGTCGTTCCAATGTCATTTTTTTTGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
298 CATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * *
15771199 TCATGTGAAGTTTCAAGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACG
363 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
* *
15771264 GTTCAGGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTT
428 GTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * * * **
15771329 GTATTTTTTTTTGGCATGCACTAAAACATTCAGCTAAAAACTCAAAGTGTACAATTTTTTGTGAC
493 GTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* *
15771394 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATAT
557 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * * *
15771459 CAAATGCTATTTAA-GGGGTGTGAGTTCTCAAGATTTGATGAGGGATAGGGAGCCAATATAAGGG
622 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* *
15771523 CCAAGTACCGGCACCCATCGTACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACC
687 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACC
** * * *
15771588 CCAATATCGCCGGTCAGGTTGTCCAGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACA
752 CCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACA
** *
15771653 TAACCGAG-CCA-ATGTTTGCTGCCACAACCCTCGGTCTGGTCCGAT
817 TGCCCGAGCCCACATG-TTGCTGCCGCAACCCTCGGTCTGGTCCGAT
* * * *
15771698 CTTAGACTGGGAAAGAACTCCGTATGCCTAAGTTAACCCACGAAATGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * *
15771763 TGGTAAGAGGGGTGGGATGCGCAAGTCGCGGATCGGCCGGGTCACCCTCTGCGTGCTGTCGATCT
66 TGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC-CCCTCTGCGTGCTGTCGATCC
* * *
15771828 TGCTGCTGCAACCCTAGGTCTGGTCTGATGTTAGA-TTGGAATGAACTCCGTATGCTTAAGCCAA
130 TGCTGCTGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
15771892 CCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * *
15771957 TGGATCAATAGGGTGGTAGGTGTGGGTTTAGGCACATCTTCATATTTGTTCCGTGCCAATGCCAT
260 TGGATCGATAGGGTGGTA-G-GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * * *
15772022 TTTTCTAGCCTGTAAATTCATACAATGGTCCCTTACGCCTTCATGTAAAGTTTCATGGCAAGACG
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * *
15772087 ACTCGTTTTTTATTTTTCACAATTTTTAAAACTTTTTAAGGTTCAGGATTTTTTAAAATTTTTTC
388 ACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTC
* * *
15772152 AGAAGGTGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
15772217 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCTATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
15772282 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTTAAAGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
15772347 TCTCAAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATAGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
15772412 ATGTGCGCCCACCACCCCCGGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAGGTTCTTC
713 ATGTGCGCACA-C-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* *
15772477 GGTGATGGTGTCCCAACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACATG-TGCTGC
776 GGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC-ACATGTTGCTGC
* *
15772541 CGCAACCCTCGGTCCGGTCTGAT
840 CGCAACCCTCGGTCTGGTCCGAT
* * *
15772564 CATAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCGCGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-
* * * * *
15772629 CT-GCTAGAGGGGCGGGATGTGCAAG-CGAGGGATTGGTCGGGTCCCGCTTTGCGTGCTATCGAT
65 CTGGCCAGAGGGGCGGGATGCGCAAGCCG-GGGATCGGTCGGGTCCC-CTCTGCGTGCTGTCGAT
* * * * *
15772692 CCTGCTGCCGTAACCCTTGGT-TCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGT
128 CCTGCTGCTGCAACCCTAGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * * *
15772756 CGACCGACGAAATGAGCGGGCGGGCGGGCAGGCACTACATCGACTAGAGAGGAGGGATGCGCAAG
192 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAG
** *
15772821 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCGTGCCAATGCCA
257 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
* *
15772886 TTTTTTTGGCTTGTAAATTCATACAATGGTCGCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
322 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * * * * * *
15772951 GACTCGTTTTTTATTTTTTACAATTATCAAAAATTTTTACGGTTC-GAGATTTTTTTAAA-TTTT
387 GACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTT
* * * * *
15773014 TAATAAAGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATCCACAAA
451 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
15773079 AAAATTCAGCTAAAAACTCGAAGTGTTCAAGATATTGTGACCATTTGAAAGAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
15773144 CAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
15773209 GTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATAAAAGGGCCAAGTACCAGCACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
** ** *** * * **
15773274 TCATGTGCGCACGATCTTAGACTAGGAATGAACTCCGTATGGTTAGACTGGGAATAAACTCCGTA
711 TCATGTGCGCAC-A-C---CCCCCGG---CCCCCCCG-ATCG-T---C--GG----AAC-CCCAA
** *** * * * * * ****** *
15773339 TGCC-TAAGTCA-ACCCACGAAACGAGCGTACGGGCGTTCAGCCAGCCAGAGGGGTGGGATGTGC
756 TGCCGTCGGTCAGGTTCTC----CG-GCG-A-TGGTG-TC--CC-GAC-GAAGAAAAATACG-GC
* * ** * * ** * * *
15773402 AAGCC-GAAGATAGATCGGGTCCC-C---TT-CT-ACGTGTA--C-CGATTCTGCTACCGCAACC
808 -A-CCAGCACAT-GCCCGAG-CCCACATGTTGCTGCCG-CAACCCTCG-GTCTGGT-CCG--A-T
* ** * * ** * * ** * * ** *
15773457 CTCAGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGT-ATGCCCAAGTTAACCCACGAAATGA
1 CTTAGACTGG---GA-ATGA-ACTCCGTATG-CCTAAGTCA-ACCCACG--AA---ACG-AGCGT
** ** * * ** * *
15773521 GCGTACGGGC-GCTCAGCCGGCCAGAGGGGCGGGATGCATAAACCGGGGATCGGTCAGGTCCCCC
53 GCGGGCGCTCAGCT-GGCCA----GAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCC
* * * ** *
15773585 TCTACGTGCTGTCGATCCTACTG-T-CATAACCCTCA-GTCCGGTCCAATCTTAGACTAGGAATG
112 TCTGCGTGCTGTCGATCCTGCTGCTGC--AACCCT-AGGTCTGGTCTGATCTTAGACTGGGAATG
* * * *
15773647 AACTCTGTTTGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAA
174 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAG
* * *
15773712 AGAGGTGGGATGCGCAAGCCGTGGATCGATAGGGTGATAGGTGAGTTTAGGCACATCTTCATATT
239 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15773777 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAGAATGGTCCCTTAACCCTTCATGT
304 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * * *
15773842 GAAGTTTCACGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTAAG
369 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAG
* * *
15773907 GATTTTTTAAAATTTTGTCAGAAGGACTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTT
434 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
15773972 TTTTTGGCATGCACAAAAAAATTCAGCCAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGA
499 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
15774037 AAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAACAAACCTGTAAAATCTCAAATGC
564 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
15774102 CCGTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
629 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
15774167 CCAGCACCCATTGCACATCATGTGTGCACACCCCCCGGCCCCCCCGATCG-CTAGAACCCCAATG
694 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATG
* * * * *
15774231 CCGTCGGTCAGGTTCTCCGACGATGGTGTCTC-AGTGAAGAAAAATACGACACTAGCACATGCCC
758 CCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCC
** *
15774295 GAGCCCAGCATG-TGCTATCGCAACCCTCGGTCTGGTCTGAT
822 GAGCCCA-CATGTTGCTGCCGCAACCCTCGGTCTGGTCCGAT
* * * *
15774336 CTTATACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACTAGCGTGCGGACGCTCAG-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * *
15774400 TCGACCAAAGGGATGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTACTGTCGATC
66 T-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCTCTGCGTGCTGTCGATC
* * * * * * * * *
15774465 TTGCTACCGGAACCCTCGGT-TCAGTCTGATCTTAGACTAGGAATGAACTCCATATGCCGAAGCC
129 CTGCTGCTGCAACCCTAGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
15774529 AACCGACGAAATGAGGGGGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATGCGCATGC
193 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
** *
15774594 CGCAGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * * *
15774659 TTTTCTAGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTAATCTGAAGTTTCATGGCAAGACG
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * *
15774724 ACTCGTTTTCTTTTTTTCACGATTTTTGAAACATTTTACGGTTC-GAGATTTTTTAAAATTTTTT
388 ACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTT
* *
15774788 CAGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAA
452 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
15774853 CAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15774918 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *** * * *
15774983 TTCTTGAGGTTTGATGAAGGATAGGATACCAAAATAACGGCCAAGTACCAGCACCCATCGTACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
15775048 CATGTTCGCACACCCCCCATGG-CCCCCCGACCGTCGGAACCCCAATACTGTCGGTCAGGTTCTC
712 CATGTGCGCACACCCCCC--GGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* *
15775112 TGGCGATGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATG-TGCTG
775 CGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CATGTTGCTG
*
15775176 CTGCAAACCTCGGTCCGGTTCAATGTTATACTAGGAATGAACTCCGTAT
839 CCGC-AACC-C--T-C-G------G---T-CT--G---G---TCCG-AT
* * *
15775225 GCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCAGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * ** *
15775290 CCGGCCAGAGGGGAGGGATGCGCAAGTCGGGGATCGACCGAGT-CCC-CT-C-TG-TGT-G---C
65 CTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTCTGCGTGCTGTCGATCC
* * * * *
15775346 TGC--C-ACAACCCTCGGTCTGGTCTGATCTCAGACTGGGAATGAACTTCGTATGCCTAAACCAA
130 TGCTGCTGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * *
15775408 CCGACGAAACGAGCGATCGGGC-GGCTAGGCACTACATCGGCCAAAGAGGCGGGATACGCAAGCC
195 CCGACGAAACGAGCGGGCGGGCGGGC-GGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
*
15775472 GTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
**
15775537 TTTCTATCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
324 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
15775602 CTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTC-GAGATTTTTTAAATTTTTTTC
389 CTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTC
** * *
15775666 AGAAGGAGTTTTGGCCCCAAACTTTTTAGACGTAATCCTTGTATTTTTTTGTGGCATGCACAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACAAAA
* * * *
15775731 ACATTCAGCAAAAAACTCGAAGCGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15775796 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCACATGCTCTTTAAGGGGGTGTAAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15775861 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCGTTGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
15775926 TATGTGCGTACACCCCCC-CCCGACCCCTTCGATCGTCGGAACCCCAATGCCGCCGGTCACGTTC
712 CATGTGCGCACACCCCCCGGCC--CCCC--CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
* ** * *
15775990 TCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCAAGCAT-ATGC
773 TCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CATGTTGC
*
15776054 TGCTGCAACCTTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
837 TGCCGCAACC--C--TC--G---G----T---CT--G---G---TCCG-AT
* * *
15776105 GCTTAGACTGGAAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAACGTGCGGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * * * *
15776170 CCGGCCAGAGGGGTGGGATACGCAAGCTGAGGATCGATCAGGTCCCCCTCTGCGTGTTGCCGATC
65 CTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCTCTGCGTGCTGTCGATC
* * * * * *
15776235 CTGCTGCCGCAACCCTCGATCTAGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTGAGCCA
129 CTGCTGCTGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
15776300 ACCGACGAAATGGGTGGGTGACGGACGGGTAGGCGGCACTACGTCGGCCAAAGAGGCGGGATGCG
194 ACCGACGAAACGAG-CGG-G-CGGGCGGG--CG-GGCACTACGTCGGCCAGAGAGGCGGGATGCG
* * * * *
15776365 CAAGCCGCGGAGCGGTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGTCAAT
253 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
*
15776430 GCCATTTTTCTGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
318 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * * *
15776495 AGACGACTCGTTTT-TGATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATGTTGTAAAAT
383 AGACGACTCGTTTTCT-ATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAAT
* * * *
15776559 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCATTTTATTTTTATTGGCATGCA
447 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * **
15776624 TAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCATCCCC
512 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
15776689 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAACATCTCAAATGCTCTTTAAGGGGGT
577 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
15776754 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCG
642 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * *
15776819 CACACCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTT
707 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTT
** * * *
15776883 CTCCGATGATGGTGTCCCGACGAAGAGAAATACAGTACCAGCACATGCCCGAGCCCAGCATG-TG
772 CTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CATGTTG
* ** *
15776947 CTACCATAACCCTCGGTCTGGTCTGAT
836 CTGCCGCAACCCTCGGTCTGGTCCGAT
*
15776974 CTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTTCGTATGCCCAAGTGAACCC
1 CTTAGACTGGGAATGAACT-C-----C---G--T----ATG--C--C---T----AAGTCAACCC
* * *
15777039 ATGAAACGAGCGTGCGGGCGCTCAGCTGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCG
40 ACGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
* ** * * * **
15777104 GGTCCCCCTCTACGTGCTACCGATCCTGCT-ATCGTAACCCTCA-ATCCAGTCTGATCTTAGACT
105 GGT-CCCCTCTGCGTGCTGTCGATCCTGCTGCT-GCAACCCT-AGGTCTGGTCTGATCTTAGACT
* * * * * * *
15777167 GGGAATGAAATCCGTATGCCTAAGCAAACCGAGGAAACAAGCGGGCGAGTGGGCGGGCACTACGC
167 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGT
* *
15777232 CGGCCAGAGAGGCGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCT
232 CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* * *
15777297 TCATATTTCTGTCGTGCCAATGCCATTTTTCTGGCTTGTAAATTTATACAATGGTCCCTTAAGCC
297 TCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * *
15777362 TTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTATTAC
362 TTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAC
* * * *
15777427 GGTTCAAGATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTAGGTACACGTGATCCT
427 GGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* * * *
15777492 TGTATTTTTGTTGGCATGCACAAAACAATTCAGCAAAAAACTTGAAGTGTACAAGATTTTGCGAC
492 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
*
15777557 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCT
557 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * *
15777622 AAAATGCTCTTGAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGC
622 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* ** *
15777687 CCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCTTGG-CCCCCC-ATTCGCCGGAAC
687 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGA-TCGTCGGAAC
* * * * * * * **
15777750 CCTAATGTCATTGGTCAGGTTTTCCGGTGATGGTGTCCAGGTGAAGAAAAATACGGCACCAGCAC
751 CCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCAC
* * *
15777815 ATGCTCGAGCCCAGCATG-TGCTGTCGTAACCCTCAATCCGGTTTGATCTTAGACTGCGAATGAA
816 ATGCCCGAGCCCA-CATGTTGCTGCCGCAA-CC-C--T-C-G---G----T---CTG-G--T---
15777879 CTCTGTAT
858 C-C-G-AT
*
15777887 GCTTAGACTGGGAATGAACTCCGTATGACTAAGTCAA-CC-CGAAACGAGCGTGCGGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * *
15777950 CTGACCAGAAGGGCAGGATGGGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
65 CTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCTCTGCGTGCTGTCGATC
* ** ** * *
15778015 CTGCTG-TCGCAACCCTTGGTCCAGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCT
129 CTGCTGCT-GCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * ** *
15778079 GACCGATGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGACCAGAGAGGCGGGATGCGC
193 AACCGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGC
* *
15778144 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTACCAATG
254 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
* *
15778209 CCATTTTTCTGGCTTGTACATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAA
319 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* * *
15778274 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTGACGGTTCGGGATTTTTTAAAATTT
384 GACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTT
* ** *
15778339 TTTTAGAAGGAGTTTTAACCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
449 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * *
15778404 AAAAAATTCAGCTAAAAACTCAAAGTGTACAATATTTTGTGACCATTTGAAAAAAGTGTCTCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* ** *
15778469 TTCAGACACTGTAATGGCTACTGATAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* ** * * * *
15778534 GAGTTCTCAAGGTTTGATGATAGATAAGGGGCCAATATAAGGGACAAGTACCAGCACCCATCACC
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * *
15778599 CATTATGTGCGCACACCCCCTGTCCCCCCCCCGATCGCCGGAACCCTAATGTCG-CTGGTCAGGT
709 CATCATGTGCGCACACCCCCCG--GCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGT
**
15778663 TCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG-T
771 TCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA-CATGTT
* * * *
15778727 GCTGCCGTAACCCTCGTTCCGGTCCAAT
835 GCTGCCGCAACCCTCGGTCTGGTCCGAT
*
15778755 CTTAGACTAGGAATGAACT
1 CTTAGACTGGGAATGAACT
15778774 GTGTATGCTT
Statistics
Matches: 9105, Mismatches: 1110, Indels: 725
0.83 0.10 0.07
Matches are distributed among these distances:
842 400 0.04
843 232 0.03
848 26 0.00
849 2 0.00
850 4 0.00
853 3 0.00
854 2 0.00
856 4 0.00
857 1 0.00
858 1 0.00
860 1 0.00
861 112 0.01
862 229 0.03
863 859 0.09
864 444 0.05
865 258 0.03
866 271 0.03
867 305 0.03
868 129 0.01
869 124 0.01
870 12 0.00
871 8 0.00
872 5 0.00
873 18 0.00
874 164 0.02
875 54 0.01
876 14 0.00
877 336 0.04
878 222 0.02
879 15 0.00
880 230 0.03
881 13 0.00
882 17 0.00
883 15 0.00
884 10 0.00
885 14 0.00
886 150 0.02
887 18 0.00
888 986 0.11
889 397 0.04
890 874 0.10
891 20 0.00
892 16 0.00
893 175 0.02
894 265 0.03
895 211 0.02
896 310 0.03
897 5 0.00
898 222 0.02
899 267 0.03
900 1 0.00
901 6 0.00
902 4 0.00
903 3 0.00
904 7 0.00
905 15 0.00
907 1 0.00
908 2 0.00
909 314 0.03
910 259 0.03
912 1 0.00
913 3 0.00
914 19 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (862 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
TGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTCTGCGTGCTGTCGATCCT
GCTGCTGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCACATGTTGCTGCCGCAAC
CCTCGGTCTGGTCCGAT
Found at i:15773327 original size:26 final size:26
Alignment explanation
Indices: 15773290--15773340 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15773280 GCGCACGATC
*
15773290 TTAGACTAGGAATGAACTCCGTATGG
1 TTAGACTAGGAATAAACTCCGTATGG
*
15773316 TTAGACTGGGAATAAACTCCGTATG
1 TTAGACTAGGAATAAACTCCGTATG
15773341 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.16, G:0.25, T:0.27
Consensus pattern (26 bp):
TTAGACTAGGAATAAACTCCGTATGG
Found at i:15773690 original size:159 final size:158
Alignment explanation
Indices: 15773316--15773682 Score: 419
Period size: 158 Copynumber: 2.3 Consensus size: 158
15773306 CTCCGTATGG
* *
15773316 TTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGTTCAGCC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCC
* ** * * * * *
15773381 AGCCAGAGGGGTGGGATGTGCAAGCCGAAGATAGATCGGGTCCCCTTCTACGTGTACCGATTCTG
66 AGCCAGAGGGGCGGGATGCACAAACCGAAGATAGATCAGGTCCCCCTCTACGTGTACCGATCCTA
* ** **
15773446 CTACCGCAACCCTCAGTTTGGTCTGATC
131 CTACCACAACCCTCAGTCCGGTCCAATC
* * *
15773474 TTAGACTGGGAATGAACTCCGTATGCCCAAGTTAACCCACGAAATGAGCGTACGGGCGCTCAGCC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCC
* * ** * * **
15773539 GGCCAGAGGGGCGGGATGCATAAACCGGGGATCGGTCAGGTCCCCCTCTACGTGCTGTCGATCCT
66 AGCCAGAGGGGCGGGATGCACAAACCGAAGATAGATCAGGTCCCCCTCTACGTG-TACCGATCCT
** *
15773604 ACTGTCATAACCCTCAGTCCGGTCCAATC
130 ACTACCACAACCCTCAGTCCGGTCCAATC
* * * * *
15773633 TTAGACTAGGAATGAACTCTGTTTGCCTAAGCCAACCGACGAAACGAGCG
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
15773683 GGCGGGCGGG
Statistics
Matches: 171, Mismatches: 37, Indels: 1
0.82 0.18 0.00
Matches are distributed among these distances:
158 102 0.60
159 69 0.40
ACGTcount: A:0.25, C:0.28, G:0.27, T:0.20
Consensus pattern (158 bp):
TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCC
AGCCAGAGGGGCGGGATGCACAAACCGAAGATAGATCAGGTCCCCCTCTACGTGTACCGATCCTA
CTACCACAACCCTCAGTCCGGTCCAATC
Found at i:15776120 original size:26 final size:26
Alignment explanation
Indices: 15776080--15776132 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15776070 CTGGTCTGAT
*
15776080 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
15776106 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
15776132 C
1 C
15776133 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:15777010 original size:26 final size:26
Alignment explanation
Indices: 15776974--15777026 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15776964 CTGGTCTGAT
15776974 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
15777000 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15777026 C
1 C
15777027 CCAAGTGAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15777544 original size:888 final size:888
Alignment explanation
Indices: 15772566--15778831 Score: 7542
Period size: 863 Copynumber: 7.1 Consensus size: 888
15772556 GGTCTGATCA
* *
15772566 TAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCGCGCGGGCGCTCAGCCT
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CT
* * * * * * *
15772631 -GCTAGAGGGGCGGGATGTGCAAG-CGAGGGATTGGTCGGGTCCCGCTTTGCGTGCTATCGATCC
65 GGCCAAAGGGGCGGGATGCGCAAGCCG-GGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * *
15772694 TGCTGCCGTAACCCTTGGTTCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCGA
129 TGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * *
15772759 CCGACGAAATGAGCGGGCGGGCGGGCAGGCACTACATCGACTAGAGAGGAGGGATGCGCAAGCCG
194 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
** *
15772824 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCGTGCCAATGCCATTT
259 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
15772889 TTTTGGCTTGTAAATTCATACAATGGTCGCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
324 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * * * * * * *
15772954 TCGTTTTTTATTTTTTACAATTATCAAAAATTTTTACGGTTCGAGATTTTTTTAAA-TTTTTAAT
389 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * *
15773018 AAAGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATCCACAAAAAAA
454 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
15773083 TTCAGCTAAAAACTCGAAGTGTTCAAGATATTGTGACCATTTGAAAGAAGTGTCCCCATTTCAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
15773148 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
15773213 TCGAGGTTTGATGAGGGATAGGGGCCCAATAAAAGGGCCAAGTACCAGCACCCATCGCACATCAT
649 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *** * *** * ** * * ** ****
15773278 GTGCGCACGA--TCTTAG-ACTAGGA--AT--GAACTCCGTATGGTTAGACTGGGAATAAACTCC
714 GTGCGCAC-ACCCCCCGGCCCCCCGATCGTCGGAAC-CCCAAT-GCT-G-CCGGTCAGGTTCTCC
* * * *** ** * **** *
15773336 -G-TATGCCTAAGTCAACCCACGAA-ACGAGCGTACGGGCGTTCAGC-CA-GCCAGAGGGGTGGG
774 GGCGATG-GT--GTC--CCGACGAAGA--AAAATAC-GGC-ACCAGCACATGCCCGA-GCCCAGC
* * *** ** ** **
15773396 ATGTGCAAGCCGAAGATAGATCGGGTCCCCTTCT-A-CGTGTACCGATTCTGCTACCGCAACCCT
829 ATGTGC-TGCCGCA-A-CCCTC-GGT-CCGGTCTGATC-T-TA--GA--CTGGGAATG-AA--CT
* *
15773459 CAGTTTGGTCTGATCT
880 C-----CGTATG--CT
* * * * *
15773475 TAGACTGGGAATGAACTCCGTATGCCCAAGTTAACCCACGAAATGAGCGTACGGGCGCTCAGCCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
* ** * * * *
15773540 GCCAGAGGGGCGGGATGCATAAACCGGGGATCGGTCAGGTCCCCCTCTACGTGCTGTCGATCCTA
66 GCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTG
* ** * * ** * * *
15773605 CTGTCATAACCCTCAGTCCGGTCCAATCTTAGACTAGGAATGAACTCTGTTTGCCTAAGCCAACC
131 CTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* *
15773670 GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGGTGGGATGCGCAAGCCGTG
196 GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
* *
15773735 GATCGATAGGGTGATAGGTGAGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
261 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
* * * *
15773800 CTGGCTTGTAAATTCATAGAATGGTCCCTTAACCCTTCATGTGAAGTTTCACGGCAAGACGACTT
326 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * *
15773865 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT-AAGGATTTTTTAAAATTTTGTCAGA
391 GTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCAGA
* * *
15773929 AGGACTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTTTTGGCATGCACAAAAAAAT
455 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
15773994 TCAGCCAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
520 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * *
15774059 ACTTTAACGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCCCGTTAAGGGGGTGTGAGTTCT
585 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
15774124 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATG
650 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
15774189 TGTGCACACCCCCCGGCCCCCCCGATCG-CTAGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
715 TGCGCACACCCCCCGG-CCCCCCGATCGTC-GGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCG
* * * * **
15774253 ATGGTGTCTC-AGTGAAGAAAAATACGACACTAGCACATGCCCGAGCCCAGCATGTGCTATCGCA
778 ATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
15774317 A-CC-C--T-C-G---G----T---CT-GG--T---CT--G-AT-CT
842 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * *
15774338 TATACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACTAGCGTGCGGACGCTCAG-TC
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCT-
* ** * * *
15774402 GACCAAAGGGATGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTACTGTCGATCTT
65 GGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCT
* * * * * *
15774467 GCTACCGGAACCCTCGGTTCAGTCTGATCTTAGACTAGGAATGAACTCCATATGCCGAAGCCAAC
130 GCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
15774532 CGACGAAATGAGGGGGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATGCGCATGCCGC
195 CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* *
15774597 AGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
260 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
* * * *
15774662 TCTAGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTAATCTGAAGTTTCATGGCAAGACGACT
325 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * *
15774727 CGTTTTCTTTTTTTCACGATTTTTGAAACATTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
390 CGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
* * *
15774792 TGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAACAAT
455 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
15774857 TCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
520 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
15774922 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCT
585 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *** * * *
15774987 TGAGGTTTGATGAAGGATAGGATACCAAAATAACGGCCAAGTACCAGCACCCATCGTACATCATG
650 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
15775052 TTCGCACACCCCCCATGGCCCCCCGACCGTCGGAACCCCAATACTGTCGGTCAGGTTCTCTGGCG
715 TGCGCACACCCCCC--GGCCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCG
* *
15775117 ATGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAA
778 ATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* * * * *
15775182 ACCTCGGTCCGGT-TCAATGTTATACTAGGAATGAACTCCGTATGCT
843 CCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCT
* * * *
15775228 TAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCAGGCGCTCAGCCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
* * * ** *
15775293 GCCAGAGGGGAGGGATGCGCAAGTCGGGGATCGACCGAGT---CC-C--C-T-CTGT-G----TG
66 GCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTG
* ** * * *
15775345 CTGCCACAACCCTCGGTCTGGTCTGATCTCAGACTGGGAATGAACTTCGTATGCCTAAACCAACC
131 CTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
** * ** * *
15775410 GACGAAACGAGCGATCGGGC-GGCTAGGCACTACATCGGCCAAAGAGGCGGGATACGCAAGCCGT
196 GACGAAACGAGCGGGCGGGCGGGC-GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
*
15775474 GGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
260 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
**
15775539 TCTATCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
325 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
*
15775604 CGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAATTTTTTTCAGA
390 CGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
** * * *
15775669 AGGAGTTTTGGCCCCAAACTTTTTAGACGTAATCCTTGTATTTTTTTGTGGCATGCACAAAAACA
455 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACAAAAAAA
* * *
15775734 TTCAGCAAAAAACTCGAAGCGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
15775799 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCACATGCTCTTTAAGGGGGTGTAAGTTC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
15775864 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCGTTGCACATTAT
649 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
15775929 GTGCGTACACCCCCCCCCGACCCCTTCGATCGTCGGAACCCCAATGCCGCCGGTCACGTTCTCCG
714 GTGCG--CA-CACCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCG
* ** * * *
15775994 ACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCAAGCATATGCTGCTG
775 GCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * *
15776059 CAACCTTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
840 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * *
15776108 TAGACTGGAAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAACGTGCGGGCGCTCAGCCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
* * * * * * * * *
15776173 GCCAGAGGGGTGGGATACGCAAGCTGAGGATCGATCAGGTCCCCCTCTGCGTGTTGCCGATCCTG
66 GCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTG
* * * *
15776238 CTGCCGCAACCCTCGATCTAGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTGAGCCAACC
131 CTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * * *
15776303 GACGAAATGGGTGGGTGACGGACGGGTAGGCGGCACTACGTCGGCCAAAGAGGCGGGATGCGCAA
196 GACGAAACGAG-CGG-G-CGGGCGGG--CG-GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* * * * *
15776368 GCCGCGGAGCGGTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGTCAATGCC
255 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
*
15776433 ATTTTTCTGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
320 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * *
15776498 CGACTCGTTTT-TGATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATGTTGTAAAATTTT
385 CGACTCGTTTTCT-ATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * * * *
15776562 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCATTTTATTTTTATTGGCATGCATAA
449 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* **
15776627 AAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCATCCCCATT
514 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
15776692 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAACATCTCAAATGCTCTTTAAGGGGGTGTG
579 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
15776757 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCGCAC
644 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
*
15776822 ACCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCC
709 ATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCC
** * * * *
15776887 GATGATGGTGTCCCGACGAAGAGAAATACAGTACCAGCACATGCCCGAGCCCAGCATGTGCTACC
774 GGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
** *
15776952 ATAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
839 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * *
15777002 TAGATTGGGAATGAACTTCGTATGCCCAAGTGAACCCATGAAACGAGCGTGCGGGCGCTCAGCTG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
* * **
15777067 GCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATCCTG
66 GCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTG
** * ** * *
15777132 CTATCGTAACCCTCAATCCAGTCTGATCTTAGACTGGGAATGAAATCCGTATGCCTAAGCAAACC
131 CTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * *
15777197 GAGGAAACAAGCGGGCGAGTGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAGGCCGTG
196 GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
* * *
15777262 GATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTGTCGTGCCAATGCCATTTTT
261 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
*
15777327 CTGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
326 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * *
15777392 GTTTTCTATTTTTCATGATTTTCAAAACTTATTACGGTTCAAGATTTTTTAAAATTTTTTCAGAA
391 GTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAA
* * * *
15777457 AGAGTTTTGGCCCCAAACTAGGTACACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATT
456 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * *
15777522 CAGCAAAAAACTTGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
521 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
15777587 CTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTAAAATGCTCTTGAAGGGGGTGTGAGTTCTC
586 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
*
15777652 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGCCCAAGTACCAGCACCCATCGCACATCATGT
651 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* ** * * * * *
15777717 GCGTACACCCCTTGGCCCCCC-ATTCGCCGGAACCCTAATG-T-CATTGGTCAGGTTTTCCGGTG
716 GCGCACACCCCCCGGCCCCCCGA-TCGTCGGAACCCCAATGCTGC--CGGTCAGGTTCTCCGGCG
* ** * * *
15777779 ATGGTGTCCAGGTGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCGTAA
778 ATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
** * * *
15777844 CCCTCAATCCGGTTTGATCTTAGACTGCGAATGAACTCTGTATGCT
843 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
*
15777890 TAGACTGGGAATGAACTCCGTATGACTAAGTCAA-CC-CGAAACGAGCGTGCGGGCGCTCAGCTG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
* * * * *
15777953 ACCAGAA-GGGCAGGATGGGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCT
66 GCCA-AAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCT
* * ** * **
15778017 GCTGTCGCAACCCTTGGTCCAGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCTGAC
130 GCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * *
15778082 CGATGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACACCGACCAGAGAGGCGGGATGCGCAAG
195 CGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* *
15778147 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTACCAATGCCA
256 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
* *
15778212 TTTTTCTGGCTTGTACATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
321 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * *
15778277 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTGACGGTTCGGGATTTTTTAAAATTTTTT
386 GACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
* ** *
15778342 TAGAAGGAGTTTTAACCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
451 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
15778407 AAATTCAGCTAAAAACTCAAAGTGTACAATATTTTGTGACCATTTGAAAAAAGTGTCTCCATTTC
516 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* ** *
15778472 AGACACTGTAATGGCTACTGATAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
581 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* ** * * * *
15778537 TTCTCAAGGTTTGATGATAGATAAGGGGCCAATATAAGGGACAAGTACCAGCACCCATCACCCAT
646 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * * *
15778602 TATGTGCGCACACCCCCTGTCCCCCCCCCGATCGCCGGAACCCTAATG-TCGCTGGTCAGGTTCT
711 CATGTGCGCACACCCCC---CGGCCCCCCGATCGTCGGAACCCCAATGCT-GCCGGTCAGGTTCT
**
15778666 CCGGCGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
772 CCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * ** * **
15778731 CCGTAACCCTCGTTCCGGTCCAATCTTAGACTAGGAATGAACTGTGTATGCT
837 CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
* *
15778783 TAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
15778832 GGAGGGCAGG
Statistics
Matches: 4644, Mismatches: 615, Indels: 210
0.85 0.11 0.04
Matches are distributed among these distances:
863 642 0.14
864 97 0.02
865 6 0.00
866 2 0.00
867 1 0.00
868 1 0.00
869 1 0.00
870 1 0.00
874 2 0.00
876 3 0.00
877 331 0.07
878 195 0.04
879 5 0.00
880 226 0.05
881 11 0.00
882 4 0.00
883 6 0.00
884 2 0.00
886 146 0.03
887 9 0.00
888 626 0.13
889 5 0.00
890 564 0.12
891 5 0.00
892 1 0.00
893 242 0.05
894 316 0.07
895 24 0.01
896 6 0.00
897 2 0.00
898 205 0.04
899 256 0.06
900 1 0.00
903 1 0.00
906 1 0.00
907 6 0.00
908 14 0.00
909 390 0.08
910 258 0.06
911 3 0.00
912 3 0.00
913 10 0.00
914 2 0.00
915 4 0.00
916 4 0.00
917 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
GCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTG
CTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAA
GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATG
GTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCT
Found at i:15777901 original size:26 final size:26
Alignment explanation
Indices: 15777862--15777913 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
15777852 CCGGTTTGAT
*
15777862 CTTAGACTGCGAATGAACTCTGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
*
15777888 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
15777914 ACTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATG
Found at i:15778805 original size:26 final size:26
Alignment explanation
Indices: 15778755--15778807 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15778745 CCGGTCCAAT
* **
15778755 CTTAGACTAGGAATGAACTGTGTATG
1 CTTAGAATAGGAATGAACTCCGTATG
*
15778781 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATAGGAATGAACTCCGTATG
15778807 C
1 C
15778808 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.15, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATAGGAATGAACTCCGTATG
Found at i:15780413 original size:26 final size:26
Alignment explanation
Indices: 15780374--15780426 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15780364 CTGGCCCGAT
*
15780374 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
15780400 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
15780426 C
1 C
15780427 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:15780513 original size:888 final size:884
Alignment explanation
Indices: 15778788--15781383 Score: 3702
Period size: 888 Copynumber: 2.9 Consensus size: 884
15778778 ATGCTTAGAA
* * *
15778788 TGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCGGGAGGGCAGGCGAGCACTACG
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-GGG-GGGCGGGCACTACG
* * * * *
15778853 TTGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGGAGGTGGGTTTAGGTAGATC
64 TCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATC
*
15778918 TTCATATTTCTGCCCTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
129 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* *
15778983 CTTCATGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTA
194 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA
* * * * *
15779048 AGGTTCGGGA-TTTTTAAAATTTTTTCAAAAGGAGTTTTGGACCCAAACTTGGTAGACGTGATCC
259 CGGTTCGAGATTTTTTAAAATTTTTT-AGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCC
*
15779112 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
323 TTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * ** * * *
15779177 CCTTTTGAGAAACCTGTCCATATTTAAGACACTTTAATGGCTACTTGCAACAAACCTGTAAAATC
388 CCATTTGAAAAAACTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* *
15779242 TCAAATGCTCTTTCAGGGGGTGCGAGTTCTCGAGGTTTGATGAGGGATAGCGGGCCAATATAAGG
453 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG-GGGCCAATATAAGG
* * * * *
15779307 GCCAAGTACCAGCACCCATTGGACATCATGTGCGCTCACCTCCCCGGCCCCCCCGATCGCCGAAA
517 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCGACCCCCCCGATCGTCGAAA
* * * * * * *
15779372 CCTCAATGCCGCCGGTTAGGTTCTCAGGCGATGGCGTCCCGATGAAGAAAAATATGGCACCAGCA
580 CCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCA
* * * *
15779437 CGTGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTCAGTCCAATCTTAGACTGGTAATGAA
645 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTT-GGTCCGATCTTAGACTGGGAATGAA
* *
15779502 CTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
709 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* *
15779567 GCGCTCAGCCGGTCGGAGGGGCGGGATGCGCAAGCCGGGGATC-GATCAAGTACCCCTCTGCGTG
774 GCGCTCAGCCGGTCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGATCAAGTACCCCTCTACGTG
* * * *
15779631 -T-TGCTGATCCTGCTGCCACAACCCTCTA-TCCGGTCTGATCTTAAAC
839 CTAT-C-GATCCTACTACCACAACCCTC-AGTCCAGTCCGATCTTAAAC
*
15779677 TGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGTGGGGGGCGGGCACTACGT
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-GGGGGGCGGGCACTACGT
* *
15779742 CGGCTAGAGCGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCT
65 CGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCT
* * * * * * *
15779807 TCATATTTCTACCATGACAGTGCCATTTTTTTGGCTTGTGAATTAATACAATGGTCCCTTATGCC
130 TCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * *
15779872 TTCATGTGAAGTTTCATGGCGAGACGACTCGTTTT-TATTTTTCACAATTTTTGAAACATTTTAC
195 TTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
15779936 GGTTCGAGATTTTTTAAAATGTTTTTAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCT
260 GGTTCGAGATTTTTTAAAAT-TTTTTAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCT
*
15780001 TGTATTTTTGTTGGCGTGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
324 TGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
*
15780066 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
389 CATTTGAAAAAACTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
15780131 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGCCCATTATAAGGG
454 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG-CCAATATAAGGG
*
15780196 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTTCGACCCCACCCGATCGTCGGAA
518 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC--CGACCCC-CCCGATCGTCGAAA
* * * *
15780261 CCCCAATACCGTCGGTCAGGTTCTCCGACGATGGTGTCCTGGCGAAGAAAAATGTGGCACCAGCA
580 CCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCA
** * *
15780326 CATGCCCGAGCCCAGCATGTGCTATCGCAACCCTCGGTCTGGCCCGATCTTAGACTGGGAATGAA
645 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGT-TGGTCCGATCTTAGACTGGGAATGAA
* * **
15780391 CTCCGTATGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAT
709 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * * ** * *
15780456 ACGCTCAACCGGTCAGAGGGGCGGGATGCGC-AGTCGGGGATCGGCT-TGGTCCCCCTCTATGTG
774 GCGCTCAGCCGGTCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGATCAAGTACCCCTCTACGTG
** * *
15780519 CTATCGATCCTACTACCGTAACCCTCAGTCCAGTCCGATCTTAGAT
839 CTATCGATCCTACTACCACAACCCTCAGTCCAGTCCGATCTTAAAC
* * *
15780565 TGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGC--GAGCGGGCGGGCACTACGTC
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGGGGGGGCGGGCACTACGTC
* * * *
15780628 GGCCAGCGAGGCGAGATGCGTAAGCCGTGGATCGATAGGGTGGTGGGTGGGTTTAGGCACATCTT
66 GGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTT
* ** * *
15780693 CATATTTTTGCTGTGCCAATGCCATTTTTCTAGCTTTTAAATTCATACAATGGTCCCTTAAGCCT
131 CATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
*
15780758 TCATGTGAAGTTTTATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACG
196 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACG
* * * *
15780823 GTTC-AGGATTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCTAAACTTGGCAAACATGATCCT
261 GTTCGA-GATTTTTTAAAA-TTTTTTAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCT
15780887 TGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
324 TGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* *
15780952 CATTTGAACAAACTGTCCCCATTTCAGACGCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
389 CATTTGAAAAAACTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * *
15781017 CAAATGCTATTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGTATATGGGGCCAATATAAGGG
454 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGG
* * *
15781082 CCAAGTACCAGCATCCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCATCGAAACC
518 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCGA-CCCCCCCGATCGTCGAAACC
* * **
15781147 CCAATGTCGCCGGTCAGGTTCTCCGACGATGGTGTCCCAGTGAAGAAAAATGCAGCACCAGCACA
582 CCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCACA
*** * * * * *
15781212 TGCCCGAGGATAGCATGTGCTGCCGCAATCCTCAATTTGATCTGATGTTAGACTGGGAATGAACT
647 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-AGTTGGTCCGATCTTAGACTGGGAATGAACT
* *
15781277 CCGTATGCTTAGACTGGGAAAGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGC
711 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * *
15781342 GCTCAGTCGGCCAGAGGGGAGGGATGCGCAAGCCGGGGATCG
776 GCTCAGCCGGTCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
15781384 ATCGGGTCTG
Statistics
Matches: 1520, Mismatches: 169, Indels: 40
0.88 0.10 0.02
Matches are distributed among these distances:
884 207 0.14
885 178 0.12
886 309 0.20
887 44 0.03
888 516 0.34
889 264 0.17
890 2 0.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (884 bp):
TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGGGGGGGCGGGCACTACGTC
GGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTT
CATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACG
GTTCGAGATTTTTTAAAATTTTTTAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
TATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
TTTGAAAAAACTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCA
AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCGACCCCCCCGATCGTCGAAACCCCAA
TGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCACATGCC
CGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTGGTCCGATCTTAGACTGGGAATGAACTCCGTA
TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
GCCGGTCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGATCAAGTACCCCTCTACGTGCTATCGA
TCCTACTACCACAACCCTCAGTCCAGTCCGATCTTAAAC
Found at i:15781295 original size:26 final size:26
Alignment explanation
Indices: 15781259--15781310 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15781249 TGATCTGATG
*
15781259 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAAAGAACTCCGTATGC
15781285 TTAGACTGGGAAAGAACTCCGTATGC
1 TTAGACTGGGAAAGAACTCCGTATGC
15781311 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.27, T:0.25
Consensus pattern (26 bp):
TTAGACTGGGAAAGAACTCCGTATGC
Found at i:15782797 original size:26 final size:26
Alignment explanation
Indices: 15782761--15782811 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15782751 GATCCGATCA
15782761 TAGACTGGGAATGAACTCTGTATGCT
1 TAGACTGGGAATGAACTCTGTATGCT
*
15782787 TAGACTGGGAATGAACTTTGTATGC
1 TAGACTGGGAATGAACTCTGTATGC
15782812 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.14, G:0.27, T:0.31
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCTGTATGCT
Found at i:15783682 original size:26 final size:26
Alignment explanation
Indices: 15783653--15783705 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15783643 CTGATCCGAT
* *
15783653 CTTATACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15783679 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15783705 C
1 C
15783706 CTAACTCCAA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15784579 original size:26 final size:26
Alignment explanation
Indices: 15784543--15784592 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15784533 CCAGTCCGAT
*
15784543 CTTAGACTGGGAATGAACTTCGTAAG
1 CTTAGACTGGGAATGAACTCCGTAAG
15784569 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
15784593 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.18, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTAAG
Found at i:15784719 original size:890 final size:886
Alignment explanation
Indices: 15781496--15804842 Score: 21312
Period size: 890 Copynumber: 26.5 Consensus size: 886
15781486 CCGATGTTAT
* *
15781496 TTTTGGCCTCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15781561 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
15781626 AATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTTTTTAAAGGTGTGTGAGTTCTTGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTTGAGG
* * * *
15781691 TTTGATGAGGGATAGGGGTCCAATATAAGGGCCAAGTACCAGTACCCAACGCACATCATGTACGC
195 TTTGATGAGGGATAGGGG-GCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* *
15781756 -ACACCCCCCAGCCCCCCCGGATCGTCGGAACCCCAATGCAGTCGGTCAGGTTCTCCGACGA---
259 AAC-CCCCCCGGCCCCCCC-GATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
* **
15781817 AG---C-A-AAATG-----TG-G-CACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCC
321 TGTCCCGACAAA-GAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
* *** *
15781870 TCGGTCCGGTGTAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTA
385 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * * * * *
15781935 TACCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTTAGCCGGTCAGAAGGGCGAGATGCGTAA
450 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
** * * * * *
15782000 GTTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCAATCCTACTGCCGCAACCCT-GGAT-CTG
515 GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGG-TCCAG
* * * *
15782063 ATCTGACCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGC
579 -TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
* * * * * *
15782128 AGGCGGGCACTACGTCGGTCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAAGGTGGCAGGCG
643 GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
15782193 GG-CTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGAAAATTCATACA
708 GGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
* * * *
15782257 ATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTACGATT
773 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * * * **
15782322 TTCAAAACTTTTTAGGGTTCGAGACTTTTTAAAATTTTTTCAGAAGCCG
838 TTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
*
15782371 TTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15782436 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
15782501 AATGGCTACTGG-AGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
*
15782565 TTTGATGAGGGATA---GG--------GGGCCAAGTACCAGCACCCACCGCACATCATGTGCGC-
195 TTTGATGAGGGATAGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * * * * *
15782618 ACACCCCCGGCTCCTCCGATCGCCAGAACCTCAATGCCGCCGGTCAGGTTCACCGGCGATGGTGT
260 ACCCCCCCGGCCCCCCCGATCGTCGGAACC-CAATGCCGTCGGTCAGGTTCTCCGACGATGGTGT
* * * ** * *
15782683 CCC-ACCGAAGAAAAATACGGCACCAGCACATGCCCGAGTGCAGCATGTGTTGCCGCAACCCTCG
324 CCCGA-CAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCG
* * * **
15782747 ATCCGATCCGATCATAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTTGTATGC
388 GTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
15782812 CTAAGTCAACCCACGAAAGGAGCGTGTGGGCACTCAACCGGCCAGAGGGGCGGGATGCGTAAGTC
453 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCC
* * * * * * * ** *
15782877 GGGGATCGGCCAGGTCTCCCTCTGCGTGCTGTCGATCCTGTTGCTGCAACCCTCGATCTGGTCTG
518 GAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGTCCG
* * * * * * *
15782942 ATCTTAGACTGGGAATGAACTCCGTAGGCCTAACCCAACCAACGAAACAAGCGAGTGGGCGGGCG
583 ATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCG
* * *
15783007 GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGTGTGGTAGGTGGGCTT
648 GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
15783072 AGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTAATAAAATGGT
713 AGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGT
* * * *
15783137 CCCTTAAGCCTTCATGTGAAGTTTCAGGGCAAGACAACTCATTTTCTATTTTTCATGATTTTCGA
778 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGA
* * *
15783202 AACATTTTACGGTTCAGGATTTTGTAAAATTTTTTCAGAAGGAG
843 AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* *
15783246 TTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAAATTCAG
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAAATTCAG
* * *
15783311 TTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACACTT
65 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
*
15783376 TAATGGCTACTGGCAGCAAACCTGGAAAATCTCAAATGCT-TTTCAAAGGGGTGTGAGTTCTTGA
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT--AAGGGGTGTGAGTTCTTGA
* * * *
15783440 GGTTTGATAAGGGATAGGGGGCCAATATAAGGTCCAACTGCCAGCACCCATCGCACATCATGT--
193 GGTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * * *
15783503 GC-A--CACAC--CTCCCCCGATCATCGAAACTCCAATGCCGACGGTCAGGTTCTTCGACGATGG
257 GCAACCCCCCCGGCCCCCCCGATCGTCGGAAC-CCAATGCCGTCGGTCAGGTTCTCCGACGATGG
*
15783563 TGTCCCGACGAAAAAAAATATGGCAACAGCACATGCCCAGCACATGCCCGAGCCCAGCATGTGCT
321 TGTCCCGAC-AAAGAAAA-AT-G---C-G-ACA---CCAGCACATGCCCGAGCCCAGCATGTGCT
* * *
15783628 GTCGCAACCCTCGGTCTGATCCGATCTTATACTGGGAATGGACTCCGTATGCTTAGACTGGGAAT
375 GTCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * * * * * *
15783693 GAACTCCGTATGCCTAACTCCAA-ACACGAAACGAGCGTACGGGTGCTCAGCCGACCAGATGGGC
440 GAACTCCGTATGCCTAAGT-CAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGC
* * * * * *
15783757 GGGATGCCCAAGCTGAGGATCGACCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTACCGTAACC
504 GGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * *
15783822 CTCGGTCCACTCCAATCTTAGACTGGAAATGAACTCCATATGCCTAAGCCAATCGATGAAACGAG
569 CTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAG
* * * *
15783887 TGGGCGGGCGGGCGGACACTATGCCGGCCAGAGAGGCGGGATGCGCAAACCGTGGATCGATAGGG
634 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* * *
15783952 TGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACCGTGCCAATGCCATCTTTTTTGGCTTGTA
699 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAT-TTTTCTGGCTTGTA
* * *
15784017 ATTTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCGTGGCAAGATGACTCGTTTTCTATT
763 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * ** *
15784082 TTTCAAGATTTTTGAAACTTTTTTTGGTTCGGGATTTTTTAAAATATTTTCAGAAGGCA-
828 TTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGG-AG
* * *
15784141 TTTTGGCCCCAAACATGGTAGACGTGATCATTGTA-TTTTGTTGGCATGCACAAAAAAATTCAGG
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15784205 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGATAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
15784270 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTTGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG-GGTGTGAGTTCTTGAGG
** *
15784335 TTTGATGATAGATAGCGGGGCAATATAAGGGCCAAGTACCACCACCCATCGCACATCATGTGCGC
195 TTTGATGAGGGATAG-GGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
*
15784400 AAACCCCCCCGGCCCCCCCGATCGTCGGAACTCCGAA-GCCGTCGGTTAGGTTCTCCGACGATGG
259 -AACCCCCCCGGCCCCCCCGATCGTCGGAAC-CC-AATGCCGTCGGTCAGGTTCTCCGACGATGG
* *
15784464 TGTCCCGACAAAGAAAAATGCGACACCAGCACATGCTCGAGCCCAGCATCTGCTGTCGCAACCCT
321 TGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT
* * *
15784529 TGGTCC-AGTCCGATCTTAGACTGGGAATGAACTTCGTAAGCTTAGACTGGGAATGAACTCCGTA
386 CGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* *
15784593 TGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAATCGGCCAGAGGGGCGGGATGCGCAA
450 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * * * *
15784658 GCCAAAGAACGGTCGGGTCCCCCTCTGTGTGTTGTCGATCCTGTTGCCACAACCCTCGGTCCGGT
515 GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGT
* * *
15784723 CCGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAATCGACGAAACGAGCAGGCGGGCGG
580 CCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * *
15784788 GCGGGCACTACGCCGGCTAGAGAGGCGGGATGCGCAAGCCGTAGATCGATAGGATGGTAGGTGGG
645 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
15784853 TTTAGGCACATCTTCAAATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAAT
710 TTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
*
15784918 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTT
775 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* *
15784983 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAG
840 CGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
** * * * * * *
15785030 TTTTGGTGCCAAACTTGGTAGACGCGATCCTCGTATTTTTTTTGGCATGCATAAAAAAACTAAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * *
15785095 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGGGTCCCTATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
15785160 AATTGCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGG-GTGAGTTCTCGAGGT
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTTGAGGT
* * *
15785223 TTGATGAGGGATAGGGGGCCAATATAAGGCCCAAGTACCAGCACCAATCACACATCATGTGCGCA
196 TTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * * * *
15785288 CACCCCCCGGGCCACCCACGATTGTCGAAACCCCAATGCCATCGATCAGGATCTCCGACGATGGT
260 -ACCCCCCCGGCC-CCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
* * * * **
15785353 GTCCCGACGAAGAAAAATGCGGCACCAGAACAAGCCATAGCCCAGCATGTGCTGTCGCAACCCTC
322 GTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTC
* * * * ** *
15785418 GGTCCGATCCGATCTTAGACTGGAAATGAACTCCGCATGCCTAAACTAACCG-ATGAA--ACG-A
387 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT--GGGAATGAACTCCGTA
* * ** *** * * * * ** *
15785479 -G--T-GGGC-A--GGCG-GGTGGGCGGGCAGGCACT-ATGTCGGCCAGAGAGGCGGGATGCGCA
450 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA-ACCGGCCAGAGGGGCGGGATGCGCA
* **** ****** * * *** * * **** ** *
15785535 AGCCGTGGATCAATAGGGT-GGTAGGTGGGT-TTAGGTAAAT-TTTCATATTTCTGCCAT--G-C
514 AGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCT--GCCGATCCTGC-TGCCGCAACCCTCGGTC
* * * ** ** * * ** * * *
15785594 CAATGCAAT-TT-TTCT-GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG-TGAAA-T
576 CAGTCCGATCTTAGACTGGGAATG-AACTCCAT---AT-G--CC-TAAGCCAAC-CGACGAAACG
** * * * ** ** * *** ****** * **** * *
15785654 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAGCTTTTTACGGTTCAAG--AT
632 AGC-GGGC-GGGCG-GGCG--GGC-ACTACGC-CGGCCAGAGAGGCGGGATGC-G--CAAGCCGT
** ** * *** ** ** * * * ** * * *
15785717 -TTTTTAAAATTTTTTCAGAAGGATTTTTGG-AC--C--CAAACTTGGTAGACGTGATCC-TTG-
687 GGATCGATAGGGTGGT-AGGTGG-GTTTAGGCACATCTTCATA-TTTCTA-CCATG--CCAATGC
* * * * * *** * * * * *
15785774 TATTTTTGTTGCAATGCACAAAAAAAAAAACTCAAAGTGT-AC--AAG-ATT-TTGTGACCA-TT
746 CATTTTTCTGGC-TTG----TAAATTCATA--CAATG-GTCCCTTAAGCCTTCATGTGA--AGTT
* * ** * *** * * ** **** * *
15785833 TCA----AA-A-AAGT-G-TCCCCATTTCAGAC-ACTTT--AATGGCTATTGGCAGCAAACCTGC
801 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAA--ACT-TT-TTA-CGGTTCGGG
*** * * *
15785887 AAAATCTCAAATGCTCTTT-A-AAGG-G
861 ATTTTTTAAAAT--TTTTTCAGAAGGAG
* * * * ** * * **** * * ** * * * *
15785912 -TGTGAGTTCTCGAGGTTTG-ATGA-GGGATAGAGGGCCAATATAAG--GGCCAAGTACCAGCAC
1 TTTTG-G-CCCCAAACTTGGTA-GACGTGAT-CCTTG--TATTTTTGTTGG-CATGCA-CA-AAA
** * * * ****** **** ***** *
15785972 CCA-TC-GC---ACA-TC-ATGTGCACACACCCCCCG-GCACCCCCCGATCTCCG-GAACCCCAA
57 AAATTCAGCTAAAAACTCGAAGTGTACA-AGATTTTGTG-ACCATTTGAAAAAAGTG-TCCCC-A
* * * * * * * * * ** *** * *
15786028 TGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAG-AAAAATGTGGCACCTGCACATGC
118 T---TTCAGACA-CTT-T-----AATGG-CTACTG--GCAGCAAACCTGTAAAATCT-CAAATGC
* **** ** * ** * * ** *** **
15786092 CCGAGCCCAGCAAGTGCTGCCGCAACCCT-CGGTCCGATCCGA-TCTTAGACTGG-AA-ATGAA-
169 TC--TTTAAG-GGGTG-TG-AG--TTCTTGAGGTTTGAT--GAGGGATAG-GGGGCAATAT-AAG
** * * * * * ** * * *** * **
15786152 CTCCATA-TGCTTAG-A--C-TGGGA-ATTAACTCCGTATA---CCTAAGTCAACCC-A---T--
223 GGCCA-AGTAC-CAGCACCCATCGCACATCATGTGCGCA-ACCCCCCCGGCCCCCCCGATCGTCG
* * * * * * * ** * ** ***
15786202 GAAACGAGCGTGCGGGCGGTCA-GTAAACT-AGAAGGGCGGGATGG-G-CAAGCCAGGGATCGAT
285 GAACCCA--ATGCCGTCGGTCAGGT--TCTCCG-A---C--GATGGTGTCCCGACAAAGAAAAAT
* * * ** ** * * * * * * * * *
15786263 CGGGTCCCCCTCTACATG---TTGTCGATC-T-TGCTGCCGCAACCATTGATCTGATCCAATCTT
340 -GCGACACCAGC-ACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGATCCGATCTT
* * * ** * * *
15786323 AGACTGGGGATGAACTCCTTATGCCTA-A----G--CCAA--CCG-ATG---AA-ACGA-GCA-G
403 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * * * * ***
15786372 -AA-GGGCGGGTGGGCACT-ACGCCGGCCATAGGGGCGGGATGCGCAAGCCGTGGATCGATAGGG
468 AAACGAGCGTGCGGGCGCTCA-ACCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGG
****** * * * * **** * * * * **
15786434 T-GGTAGGTGGGT-TTAGGCGCAT-CTTCATATTTCTATCAT--G-CCAATGCC-AT-TT-TTCT
532 TCCCCCTCTGCGTGCT-GCCG-ATCCTGC-TGCCGCAACCCTCGGTCCAGT-CCGATCTTAGACT
** * * ** ** *** * * *
15786490 -GGCTTGTAAATTCATACAATGGTTCCTTAAGCC-TTC-ACGTGA--AG-TTTCAAGGCAAGAC-
593 GGGAATG-AACTCCAT---AT-G--CC-TAAGCCAACCGACGAAACGAGCGGGC-GGGC-GGGCG
**** * ***** ** *** ** * ** * * * **
15786548 -G-ACT-CGTTTTCTA-TTTTTCATGATTTTCAAAAC-T--TTTTAT-GGTTCG-AGAT-TTTTT
648 GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * ** *
15786603 A---AAATCTTTTCAGAAGGAGTTTTGGCT-CCAAACTTGGTTGAAGTGATCCTTGTATTTTTGT
713 AGGCACATC--TTC---A-TA--TTT--CTACC--A--T-G-CCAA-TG--CC----ATTTTT-C
* * * ** ** * *
15786664 TGGCATGCACAA---AAAC-AT--TCAGTTAAAAAC-TCGAAGTGTACAAGATTT--T-G--TGA
754 TGGCTTGTA-AATTCATACAATGGTCCCTT-AAGCCTTC--A-TGT-GAAG-TTTCATGGCAAGA
* **** ** * * * * * * * *** *
15786717 CCA-T--TTGAAAAAAGTGTCCCCA-TTTC-AGACATTTTAAGGGCTACTGGCAGCAAACCTATA
812 CGACTCGTT-TTCTATTTTTCACGATTTTCGAAAC-TTTTTACGG-TTC-GG--G--ATTTTTTA
**
15786777 AAATTCAAATGCTTT-TTAAGG-G
869 AAATT----T--TTTCAGAAGGAG
* * * ** ** * * * ****
15786799 GTTTGAGTTCACAAGGTT--T-GA--TGA---GGGTA---TAG--GG---GCCCAATTAAGGCCC
1 TTTTG-G-CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA-AAAAATTC
* * * ** * ** * ****** * * *
15786848 AAG-TAACCAGCACCCA-TCGCCACATCA-TGTGCTGCACCA--CCCCCCAGGCCGCCCCCCGAT
63 -AGCTAA-AAACTCGAAGT-G-TACAAGATTTTG-TG-ACCATTTGAAAAAAG-TG-TCCCC-AT
* * *** **** *
15786908 CGTCGGA-ACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCTCGGTGAAGAA----AAA
119 -TTCAGACACTTTAATG--G-C--T-A----CT--GGC-A-GCAAAC-CTGT-AA-AATCTCAAA
* *** ** * ** **** ** ** *
15786968 TGCGAC-ACCAGGACATGCTCGAG-CCCAGCATGTGCTATTGCAACCCTCGG-TCCGGTCCGATC
166 TGC-TCTTTAAGG-GGTG-T-GAGTTCTTG-A-G-G-T-TTG--A-TGAGGGATAGGGGGCAAT-
* ** * * * * ** * * * * ** * * ** *** * *
15787030 TTAGACTGCGAATGAACTCCGTATGCTTAGACTAGGAATAAACTCCG-TATGCCTAAGTCAACCC
218 ATA-AGGGCCAA-GTAC-CAGCACCCATCG-C-A--CATCATGTGCGCAACCCCCCCGGC-CCCC
* * * * * *** * ** * ***
15787094 ACGAAATGAGCGTACGG-GCGC--T-CAGTCGGCCAGAGGGGT--G-GGAT-GTG-CAAGCCGGG
275 CCG--AT---CGT-CGGAACCCAATGCCGTCGGTCAG-GTTCTCCGACGATGGTGTCCCGACAAA
*** * * * * * * * * * ** * *
15787150 GATCGA-CCGGCTCC--C-CCT-CTACGTGCTGCTG-ATCCTGCTG-CTGCAACCCTCATTTCGG
333 GAAAAATGCGACACCAGCACATGC-CCGAGC-CCAGCAT-GTGCTGTC-GCAACCCTCGGTCCGA
* * * * *
15787208 TCCCATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTCGTATGACTAAGT
394 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
15787273 CAACCCACAAAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCTTGA-GA
459 CAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGC-CGAGGA
* * * ** ** * * * *
15787337 TCAGTCGGGTCCCTCTCTAAGTGCTATCGATCCTAGTATG--ACAACCCTCGGTCCGGTTCGATC
523 TCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCT-G-CTGCCGCAACCCTCGGTCCAGTCCGATC
* * * *
15787400 TTAGACTGGGAATGAACTCCGTATGCTTAAGCCAACCGACGAAACGAGCGGGCGGGTGGGTGGGC
586 TTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC
* * *
15787465 ACTACGTCGGCCAGAGAGGCGGGATGTGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
651 ACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* * * *
15787530 CACGTCTTTATATTTTTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACATTGGTCCC
716 CACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCC
* *
15787595 TTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAAC
781 TTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAAC
* * **
15787660 TTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAAAAACAG
846 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* *
15787701 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG-AGTGCACAACATAATTCAG
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTCAG
* *
15787765 CTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCGTTTC-GAACACT
65 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACT
* * *
15787829 TTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAAGGGTGTGAGTTCTCGA
129 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTTGA
15787894 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
193 GGTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
** * * * * * *
15787959 GC-ACACCCCCCGGCCCCCTAGATCGTTGAAACGCCAATGCTGCCGGTTAGGTTCTCCGGCGATG
257 GCAAC-CCCCCCGGCCCCCCCGATCGTCGGAAC-CCAATGCCGTCGGTCAGGTTCTCCGACGATG
*** * * *
15788023 GTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
320 GTGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
* * *
15788088 TCAGTCC-ATCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTA
385 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * * * * * **
15788152 TGACTACGTCAACCCACAAAACGAGCGTGCAGGTGCCCAGCCGGCCAGAGGGGCGGGTTGCATAA
450 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * *** * * **
15788217 GCTGGGGATCGACCGGGTCCCCCTCTGTGTGCTGCTGATCCTACTATGGTAACCCTCAGTCTGGT
515 GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGT
* * * *
15788282 CCAATCTTAGACTGGGAATGAACTCCGTATGCTTAAGCCAACTGACG-AACTGAGCGGGCGGGCG
580 CCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAAC-GAGCGGGCGGGCG
* * * *
15788346 GGCGGCCACTATGCCGGCCAGAGAGGCGGGATGCGTAAGCTGTGGATCGATAGGGTGGTAGGTGG
644 GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
15788411 GTTTAGGTAGATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAA
709 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
* *
15788476 TGGTCCCCTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTCACGATTT
774 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
** * * *
15788541 TTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGCAT
839 TCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
*
15788589 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGAATGCACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * * *
15788654 TAAAAACTTGAAGTGTACAAGATTTTCTTACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * **
15788719 AACGGCTACT-ACTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGTTCTCAAG
131 AATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG-TGTGAGTTCTTGAG
* * *
15788783 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAGCAGCACCCATCGCACATTATGTGTG
194 GTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * *
15788848 CACACCCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGTCATCGGTCAGGTTCTCCGAC-ATTG
258 CA-ACCCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGA-TG
* *** * * * *
15788912 GTGTCTCGGGGAAGAAAAATACGGCACCATCACGCACATGCCCGAGCCTAGCATGTGCTGTCGTA
320 GTGTCCCGACAAAGAAAAATGC-G-A-CACCA-GCACATGCCCGAGCCCAGCATGTGCTGTCGCA
* * * * * *
15788977 ACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATTTGCTT-GACTGGGAATGAACTT
381 ACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * * *
15789041 TGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGTGTGCTCAGCTGACCAGAGGGGCGGGATGC
446 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGC
* * * ** * * ** * *
15789106 ACAAGGC-AGGGATCGGCCGGGTCCCCCTCTGCATGCTATCGATCC-GTTGCTGTGACCCTTGAT
511 GCAAGCCGA-GGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGT
* * * * *
15789169 TCGGTCCGATCTTAGACT-GGAATGAACTCCGTAAGCCTAAGCCAACCGACGAAACGAGTGGGCG
575 CCAGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCG
* * * * * * *
15789233 GACGGGCTGGCACTACGTCGGCCAGAGAGGCGGGATACGGAAGCCGCGGATCGATAGGGCGGTAG
640 GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
** * * *
15789298 GT-GG--TAGGCGGGATGCGT-A-A-----GCCGTGCCAATGCCA-TTTTCTGGCTTGTAAATTC
705 GTGGGTTTAGGC-ACAT-CTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
* *
15789352 ATACAATGGTCCCTTAAGCCTTCATATGAAGTTTCGTGGCAAGA-GCACTCGTTTTCTATTTTTC
768 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG-ACTCGTTTTCTATTTTTC
* * *
15789416 ACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAATTTTTTTCAGAAGGAG
832 ACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * *
15789471 TTTTGGCCCCAAACTTGGTAGACCTGATCCTTGTATTTTTGTTAGCATGCACAAAACAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
**
15789536 TAAAAACTCGAACCGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
15789601 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTTGAGG
*
15789666 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGC
195 TTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * *
15789731 ACACCCCCCCCGACCGCCCTGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCAATGG
259 A-A-CCCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
*** * * ** * *
15789796 TGTCCCGGTGAAGAAAAATGTGACACCAGCACATGCCCGAGCCCAGCATGTACTACCGTAACCCC
321 TGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT
* * * * * * * *
15789861 CGGTCTGGTCCAATCTTAGACTGTGAATGAACTCCATATTCCTAGACTAGGAATGAACTCCGTAT
386 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* **
15789926 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCATAAG
451 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAG
* * * * *
15789991 CC-AGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAATCGTCGGTCCGGT
516 CCGA-GGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGT
* * * *
15790055 CCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCCACGAAACGAGCGGGCGGACGG
580 CCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * *
15790120 GCGGGAACTACGCCGGCCAGAGAGGCGGGATGTGCAAGCCGTGGATCGATAGGGTGGTTGGTGGG
645 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * *
15790185 TTTAGGCACATCTTCATATTTCTGCCATGCCAATACCATTTTTCTGACTTTTAAATTCATACAAT
710 TTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
* *
15790250 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTATCTATTTTTCATGATTTT
775 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** * * *
15790315 TAAAACTTTTTACGTTTCAGGATTTTTTAAACTTTTTTCAGAAGGAG
840 CGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
** * *
15790362 TTTTGGCCCCAAACAAGGTAGACGTGATCCTTGTTTTTTTTTTTGGCATGCACAAAAAAATTCAG
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTG-TATTTTTGTTGGCATGCACAAAAAAATTCAG
* * * *
15790427 CCAAAAACTCGAAGGGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCAATTTCAGACACTT
65 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
15790492 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCGAG
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTTGAG
* * *
15790557 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTACCAGCTCCCATCGCACATCATGCGCG
194 GTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
** * * * * * * *
15790622 CACACCCCCCCCGATCGCTCTGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGGCAAAG
258 CA-A-CCCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATG
* ** * * * * ** *
15790687 GTGTGCCGATGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCGTGTGCTACCGTAACCC
320 GTGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
* *
15790752 TCGGT-CTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACCCCGT
385 TCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * * ** * * *
15790816 ATGCCTAAGTCAAGCCACAAAACGAGCATGCGGGCACTCAGTCGACCAGAGGGGCCGGATGCGTA
449 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCA
* * * * * * * *
15790881 AGCCAAGGATCGACCGGGTCTCCCTCTGCGTGCTGTCGATCCTACTACCGCAACCCTAGGTTC-G
514 AGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAG
* ** * * *
15790945 ATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTATGCGAA-CGAACGAAACGAGCGGGTGGG
579 -TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCG-ACGAAACGAGCGGGCGGG
* * * * * *
15791009 CGGCCGGGCACTACACCAGCCAGAGAGGCGGGATCCGCAAGTCGAGGATCGATAGGGTGGTAGGT
642 CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * * *
15791074 TGGTTTAGGCACATCTTCATATTTCTGCCATACCAATGCCATTTTTCTGGCCTGTAAATTCATAC
707 GGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
* * *
15791139 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGATGACTCGTTTTTTATTTTTCACGAT
772 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * * * *
15791204 TTTCAAAACTTTTTACGGTTCAGGATTTTTT-AAAGTCTTACAGAAGGAG
837 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * *
15791253 TTTTGGCCCCAAACTTGGTAGACGCGATCCTTGTACTTTTGTTGGCATGCATAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * * *
15791318 TAAAAACTTGAACTTTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
15791383 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGT
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
* * ** *
15791448 TTTGATGAGGGATAAGGGGCCAACATAACAGCCAAGTACCAGCACCCATCACACATCATGTGCGC
195 TTTGATGAGGGAT-AGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
15791513 -ACACCCCCCGGCACCCCCCAATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGATGG
259 AAC-CCCCCCGGC-CCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
* ** * * * *
15791577 TATCCCGATGAAGAAAAATGTGGCACTAGCACATGGCCGAGCCCAGCATGTGCTGTCGCAACCCT
321 TGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT
* * * * * *
15791642 CGGACCAATCTGATCTTAGACTGGGAATGAACTCCATATGCTTGGACTGGGAATGAACTTCGTAT
386 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
15791707 GTCTAAGTCAACCCATGAAACGAACGTGCGGGCTCTCAGCCGGCCAGAGGGGCGGGATGCGTAAG
451 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAG
* * * *
15791772 CCGAGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTTGGTCCGGTC
516 CCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGTC
* * * ** * *
15791837 TGGTCTTAGACTGGGAATTAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGTGGGTGGG
581 CGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
*
15791902 CGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
646 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** *
15791967 TTAGGCACATCTTCATATTTCTGCTGTGCCAATGCCATTTTTCTGGTTTGTAAATTCATACAATG
711 TTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
* *
15792032 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCAAGATTTTC
776 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * ** * *
15792097 AAAACTTTTTATGGTTCAAGATTTTTTAAAATTTTTTCAGAAGTAT
841 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * *
15792143 TTTTGGCCCCAAACATT-GTAGACGTGATCCTTGTATTTTTATTGGCACGCACAAAAAAATTTAG
1 TTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* *
15792207 CTAAAAACTCTAAGTATACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
65 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
*
15792272 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAG
* *
15792337 GTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGC
194 GTTTGATGAGGGATAGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * *
15792402 -ACACCCCCTGACCCCTCCGATCGCCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGATGATGGT
259 AAC-CCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
* * * * * * * *
15792466 GTCCCGACGAAGAAAAATACGGCACCAGCACGTGCCTGAGACCAGCATGTGCTGCCACAA-CC-C
322 GTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTC
* *
15792529 --T-CG----G-TC-----C-----A-G---TCCG-AT-CTTAGACAGGGAATGAACTCTGTATG
387 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* ** * * **
15792570 CCTAAGTCAACCCATGAAACGAGCGT-ATGGCGCTCACCCGGCCAGAGGGGCGAGATGCATAAGC
452 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGC
** * ** * * ** *
15792634 CGATCATCGACCGGGTTTCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCT
517 CGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGTCC
* * * * **
15792699 GATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCGAACCGACAAAACGAGCGGGCAAGCGGGC
582 GATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC
* *
15792764 GGGCACTACGCCGGCAAGAGAGGCGGGATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGGTT
647 GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * *
15792829 TAGGCACATCTTCATATTTCTGCCATGCCAATGCCA-TTTTCTTGGTTTCTAAATTCATACAATG
712 TAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTC-TGGCTTGTAAATTCATACAATG
* * *
15792893 GTCCCTTTAGCCTTCATGAGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
776 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * *
15792958 GAAACTTTTTACGATTCGGGATTTTTTAAAATTTTTTTAGAAGGAT
841 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * *
15793004 TTTTGGCCCCAAACTTAGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAAC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15793069 TAAAAACTCGAAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
15793134 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT-TTCAAG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTT-GAG
* * *
15793198 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATTGCACATCATGTGTG
194 GTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * * * *
15793263 C-A------C--ACCCCCCGATCTTCGGAACCCCAATACCGCCGGTCAGCTTCTCCGACGATGAT
258 CAACCCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
** * * * * *
15793319 GTCCCGATGAAGAAAAATACGGCACCAGCACAT-CCCGAGCCCAACATGTGCTGCCACAACCCTC
322 GTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTC
* * * * *
15793383 GGTCCGGTTCGATCTTAGACTGGGAATGAACCCCGTATGTTTAGACTAGGAATGAACTCCGTATG
387 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* ** *
15793448 CCTAAGTCAACCCACGACACGAGCGTGCGAACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
452 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGC
* * * ** * ** * * * **
15793513 TGAGGATCGCCCGGGTCCCCTTCTATGT-ATGCCTAAGATCGGGATG-TGGAACCCTCGGTCTGG
517 CGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCC---GATCCTGCTGCCGCAACCCTCGGTCCAG
* * * * * * *
15793576 TCCAATCTTAGACTGCGAAAGAACTCCGTATGCCTAAGCCAACTGATGAAACGAGCGGACGGGCG
579 TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
* * *
15793641 GGCGGGCACTACGCCGGCCCGAGAGGCGGGATGCGCAAACCGTGGATCGAAAGGGTGGTAGGTGG
644 GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
15793706 GTTTAGGCACATCTTCATATTTCTGCCATGCTAATACCATTTTTCTGGCTTGTAAATTCATACAT
709 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
* *
15793771 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACCATTT
774 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
*
15793836 TTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG-AGTGAG
839 TCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAG-GAG
* * * * * * * * * *
15793884 TTTTGGCCACAAACTCGATAGATGTCATCATTGTATTTTTGTTGGCATGTACGAAACAATTCAAC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15793949 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTGCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
15794014 AATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGTGTGAGTTCTTGAGG
* * * *
15794079 TTTGTTGTGTGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
195 TTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * *
15794144 ACACCCCCCTCGGCCCCCCCGATCGT-TGAACCCTAATGTCGTCGGTTAGGTTCTCCGATGATGG
259 A-ACCCCCC-CGGCCCCCCCGATCGTCGGAACCC-AATGCCGTCGGTCAGGTTCTCCGACGATGG
*** * * * * *
15794208 TGTCCCGGTGAAGAAAAATGTGGCACCAGCACATGTCCGAGCTCAGCATGTGCTGTCGTAA-CC-
321 TGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT
* *
15794271 C--T-CG----G---TT---C---G---G---TCCG-AT-CTTAGACTGGGAATGAAATCCGAAT
386 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * *
15794312 GCCTAAGTCAACCCAC-AAGACGAGCGTGCGGGCACTCAGCCGTCGAGAGGGGTGGGATGCGCAA
451 GCCTAAGTCAACCCACGAA-ACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
** * * *** *
15794376 GCCTG-GGATCGATCGGGTCCTCCTTTGCGTGCTATTGATCCTGCTGCCGCAACCCTTGGTCC-G
515 GCC-GAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAG
* * * *
15794439 ATCTGATCTTAGACTGGGAAAGAACT-CATATGCCTAAGCCAACCGATGAAACGGGCGGGCGGGC
579 -TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
* *
15794503 GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATTGATAGGGTGGTTGGTG
643 GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * **
15794568 GCTTTAGGCACATCTTC-TCATTTTTGCTGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
708 GGTTTAGGCACATCTTCAT-ATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
* *
15794632 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTTACGAT
772 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* **
15794697 TTTCAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAG
837 TTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * *
15794747 TTTTGGCCCCAAATTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAAATCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
15794812 TAAAAAATCTG-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACAT
66 TAAAAACTC-GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * * *
15794876 TAATAGATACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAG
* *
15794941 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATCTTGTGCG
194 GTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
** * *
15795006 C-ACACCCCCCGGCCCCCCCGATCGTCAAAACCCCAATACCGCCGGTCAGGTTCTCC-AGCGATG
258 CAAC-CCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGA-CGATG
* * ** * * * * *
15795069 ATGTCTCGATGAAGAAAAATACGGCACCAGTACATGCTCGAGCCCAGCATGTGCTGCCGCAACCC
320 GTGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
* * *
15795134 TAGGTCCGATCCAATCTTAGACTGGGAATGGACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
385 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * ** * * *
15795199 TGCCCAAGTCAACCCACAAAACGAGCATGCGGGCGTTCAGTCGACCAGAGGGGCGAGATGCACAA
450 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * * * * * **
15795264 GCCGGGGATCGGCCAGGTCCCCCTTTGTGTGCTGTCGATCTTGCTACCGTAATCCTTGCTCTGGT
515 GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGT
* * * * *
15795329 CTGATCTTAGACTGGGAAGGAACTCCGTATGTCTAAGCCAACCGATGAAACGAGCGGGCGGGGGG
580 CCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGC---GGG
* * * * * *
15795394 ACGGGCGGGCACTATGTCAGCCCGAGAGGCGGGATGCACAAGCCATGGATCGATAGGGTGGTAGG
642 -CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
**** *
15795459 TGGGTTTAGGCACATCTTCATATTTCTGTGGTGCCAATACCATTTTTCTGGCTTGTAAATTCATA
706 TGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
*
15795524 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTAT-AATTTTTCACG
771 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT-TCTATTTTTCACG
* * * * *
15795588 ATTTTCAAAACTTTTTACAGTTCAGGATTTTTTAAAAATTTTTCAGAATGAG
835 ATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * * * *
15795640 TTTTGGACCCAAACATGGTAGACATGATCCCTGTATTTTTCTTGGCATGCACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
15795705 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
15795770 AATGGCTATTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
* * * * * *
15795835 TTTGATGAGGGATATCGGGCCAAAATAAGGGCCAAGTACTAGTACCCATCGCACATCATGTGTGC
195 TTTGATGAGGGATA-GGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
** * * * *
15795900 ACACCCCCCCGGCCCCCTTGATCGTTGGAACCCCATTGCCGCCGGTCAGGTTCTTCGACGATGGT
259 A-ACCCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
* * * * * *
15795965 GTCCCGACGAAGGAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCACAA-CC-C
322 GTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTC
*
15796028 --T-CG----G---TT----T--G---G---TCCG-AT-CTTCGACTGGGAATGAACTCCGTATG
387 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * ** *
15796069 CCTAAGTCAACTCACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGC
452 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGC
** * * * * ** ** **
15796134 C-AGGGATCGATCGTGTCCCCCAT-TGCATACTACCGATCCTGCTGGTGCAACCCTCAATCTGGT
517 CGA-GGATCGGCCGGGTCCCCC-TCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGT
* * * * *
15796197 CTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGAGCGG
580 CCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * **
15796262 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTGGGTGCA
645 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
15796327 TTTAGGCACATCTTCATATTTCT-GCAGTGCCAATACCATTTTTCTGGCTTGTAACTTCATACAA
710 TTTAGGCACATCTTCATATTTCTACCA-TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
* * *
15796391 TGGTCCCTTAAGCCTCCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTT
774 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * *
15796456 TCGAAACTTTTTACGATTCAGGATTTTTTTAAATTTTTTCAAAAGGAG
839 TCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * * *
15796504 TTTTGGCCCCAAACTTGGTAAACGTGATCCTTGTATTTTTTTTGGCATGCATAATAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15796569 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
**
15796634 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
* * *
15796699 TTTCATGAGGGATAGGGGGCCAACATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
195 TTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
** * * * * **
15796764 -ACACCCCTTGGCCCCCCCGATGGCCGGAACCCCAATGCCATCGATCAGGTTCTTTGACGATGGT
259 AAC-CCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
*** * *
15796828 GTCCCGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAG-ATGTGCT-ACATCAACCCT
322 GTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTC-GCAACCCT
* * * * * * *
15796891 CGGTCTGGTTCGATGTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATAT
386 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * ** *
15796956 GGCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGGCGGGAGGCGCAAG
451 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * *
15797021 TCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTTGGTTCGGTC
516 CCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGTC
* * *
15797086 TGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
581 CGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* * *
15797151 CGAGCACTACGCCGGCCAAAGAGGCGGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
646 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
15797216 TTAGGCACATCTTCATATTTCTACCATGCCAATGCCA-TTTTCTGGCTTGTAAATTCATACAACG
711 TTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
* * * *
15797280 GTCCCCTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
776 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
** * *
15797345 GAAACTTTTTACGGTTCAAGATTTTTTTAAATTTTTTTAGAAGGAG
841 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
*
15797391 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15797456 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * * *
15797521 AATGGCTACCGTCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
* *
15797586 TTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGC
195 TTTGATGAGGGAT-AGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
15797651 ACAGCCCCCCCGGTCCCCCCAATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGACGATGG
259 A-A-CCCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
*** * * * * * * * * *
15797716 TGTCCCGGTGAAGAAAAATACGAAAGCAGCAAATGCCCAAGCCCAACATTTGCTGCCGTAACCCT
321 TGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT
** * * * ** *
15797781 CAATCTGATTCTATCTTAGGTTGGGAATGAACTCCGTATGCTTAGCCTGGGAATGAACTCCGTAT
386 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * ** * *
15797846 GCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTTAGCAAGCTAGAGGGGCGGGATGTGCAAG
451 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAG
* ** * * * * * * * * *
15797911 CCGGGGATCTTCCAGGTCCCCCTCTGTGTGCTGTCGATCCTACTACCGTAACCCTCGATTCGGTC
516 CCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGTC
* * ** *
15797976 TGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGG
581 CGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* * * * *
15798041 CGGACACTACGTCGGCCAGAGAGGCGGGATACGTAAGCCATGGATCGATAGGGTGGTAGGTGGGT
646 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
**
15798106 TTAGGCACATCTTCATATTTCTACCGCGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
711 TTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
15798171 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA--C----TC-A-TTTT--C-----T-
776 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * * *
15798220 ---A-TTTTT-C--AT---GATTTTTTAAAACTTTTTCAAAAGGAC
841 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
*** * *
15798256 TTTCAACCCCAAACTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * *
15798321 TAAAAACTCGAAGTGTACAAGATTTTGTAAGCATTTGAAAAAAGTATCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * * *
15798386 AATTGCTACTGACAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTT-TTCAAG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTT-GAG
* *
15798450 GTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCGGCACCCATCGCACATCATGTGCG
194 GTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * ** ** * * * *
15798515 CACACCCCCCTCGGTCGCCTTGATCACCGTAACCCCAATGTCGTCGATCAGGTTCTCCGACGATT
258 CA-ACCCCCC-CGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATG
* ** * * * * *
15798580 GTGTCCCGACGAAGAAAAATATGACACCAGCACATGCTCGATCCCAGCTTGTGCAGCCGCAACCC
320 GTGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
* * **
15798645 TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTTGTA
385 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * *** * * *
15798710 TGCCTAAGTCAACCCCCAAAAAGAGCGTGCGGGTGCTCTGTCGACCAGGGGGGCCGGATGCGCAA
450 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * *
15798775 GCTG-GTGATCGACCGGGTCCCCCTCTGTGTGCTGCCAATCCTGTTGCCACAACCCTCGAT-CTG
515 GCCGAG-GATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAG
* * * * * * *
15798838 ATCCCATCTTTGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACAAAACGAGCAGGCGGGT
579 -TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
* ** * * * *
15798903 GGGTGGGCACTACATCGGCCAGAGAGACGGGATGCGAAAGCCGTGGATCAATAGGGTGATAGGTG
643 GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* *
15798968 GGTTTAGGCACATCTTCATGTTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
708 GGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
* * *
15799033 ATGGTCCCTGAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCATGATT
773 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * * *
15799098 TTCAAAACTTTTTACAGTTCGGGATTTTATAAAATTTTTTCAGAAGGTG
838 TTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* *
15799147 TTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
15799212 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
15799277 AATGGCTACCT-GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
131 AATGGCTA-CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAG
* *
15799341 GTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCG
194 GTTTGATGAGGGAT-AGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * * * **
15799406 CACACCCCCCAGCCCCCCCCGATCGTTGAAACCCTAATGCCGTCTGTCAGGTTCTCCGGTGATGG
258 CA-ACCCCCCCGGCCCCCCCGATCGTCGGAACCC-AATGCCGTCGGTCAGGTTCTCCGACGATGG
* * * *
15799471 TGTCCCGGCAAAGAAAAATGC-AGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGTAACCC
321 TGTCCCGACAAAGAAAAATGCGA-CACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
* * *
15799535 TCGGTCC-AGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTTGATTGGGAATGAACTCCGT
385 TCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * ** ** * *
15799599 ATGCCTAAGCCAACCCACGAAACGAGCGTGTGGGCATTCAGTCGGCCAGAAGGGCGGGATGCGTA
449 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCA
* * * ** * * *
15799664 AGCCGGGGATCGACCGGGTCCCCCTCAGCGTGCTATCGATCCTGCTGCTGCAACCCTAGGTCTAG
514 AGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAG
* * * *
15799729 GCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACG
579 TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
* * *
15799794 AGCGGGCACTACGACGGCCAGAGAGGCGGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
644 GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
15799859 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAATTTTCTGGCTTGTAAATTCATACAA
709 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
* * *
15799924 TGGTCCCCTAAGCCTTCAAGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
774 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
*
15799989 TCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
839 TCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* ** **
15800037 TTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCGTAAAATGATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
15800102 TAAAAATTTC-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTCAGACACTT
66 TAAAAA-CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
** * * *
15800166 TAATGGCTACTGAAAGCAAACCTGTAGAATCTCAAATGCTCTTTAAGAGGGTTTGAGTTCTCGAG
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTTGAG
* * *
15800231 GTTTGATGAGGGATAGGGGACCAATATAAGTTG--AAGTACCAGCACCCATCGTACATCATGTGC
194 GTTTGATGAGGGATAGGGG-GCAATATAAG-GGCCAAGTACCAGCACCCATCGCACATCATGTGC
** * *** * *
15800294 GC-ACACCCCCCGGCCCCCCCGATCACCGAAATCCCAATGCTACCGGTCAGGTTCTCTGGCGATG
257 GCAAC-CCCCCCGGCCCCCCCGATCGTCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATG
* ** * * * *
15800358 ATGTCCC-AGTGAA-AAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCACAACC
320 GTGTCCCGA-CAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACC
* * * *
15800421 CTTGGTCC-ATTCTGACCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCA
384 CTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
15800485 TATGCCTAAGTCAACCCATGAAACGAGCGGGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGTG-
448 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGC
* * ** * * * * *
15800548 AATACCGGGGATCGATCGGGTCCCCCTTTGCGTGCTACCGATCCTGCTGCTGCAACCCTCAGTCT
513 AA-GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCC
* * * * * * *
15800613 GGTCCAATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGCCAACAGATGAAATGAGCGGGCGGG
577 AGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
* * * *
15800678 CGGGCAGGCACTACGTCGGCCAGAGAGGCGGGATGCACAAGCCGTGGATC-AGTAGGGTGCTAGG
642 CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-TAGGGTGGTAGG
*
15800742 TGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATA
706 TGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
* *
15800807 CAATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
771 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* *
15800872 TTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAG
836 TTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * *
15800923 TTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGT
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15800988 TAAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * * **
15801053 AATGGCTACTGGTAGCAAACTTGTAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
* * * *
15801118 TTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCATCCCACATCGTGTGCGC
195 TTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* **
15801183 -ACACCCCCCGGCCCCCCCGATC-TCCGGAACCTCAATGCCGTCGGTCAGGTTCTTCGGTGATGG
259 AAC-CCCCCCGGCCCCCCCGATCGT-CGGAACC-CAATGCCGTCGGTCAGGTTCTCCGACGATGG
*** * * * * * *
15801246 TGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCAAGCCCAGTATGTGTTGCCGTAA-CC-
321 TGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT
15801309 C--T-C-A---G-TC-----C------T--A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTAT
386 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * ** *** * * *
15801350 GCCCAAGTCAACCCACAAAACGAGCAGT-CGAGCGGGCAGTTGACCAAAAGGGCGGGATGCGCAA
451 GCCTAAGTCAACCCACGAAACGAGC-GTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * **
15801414 GTCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCCTCGGTCTGGT
515 GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGT
* * * *
15801479 CTGATCTTAGACTAGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
580 CCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * ** * * *
15801544 GCAGGCACTACGTCTACCACAGAGGCTGCATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
645 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * *
15801609 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGCCTTTTAAATTCATACAAC
710 TTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
* * *
15801674 GGTCCCGTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTATATTTTTCACGATTTT
775 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** * * * *
15801739 TAAAACTTTTTGCAGTTCGGGATTTTTCAAAATTTTTTTTAGAAGGAG
840 CGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCAGAAGGAG
* * * * * * *
15801787 TTTCGGCCTCAAACTTGGTAGACATGATCCTTCTATTTTTATTAGCATGCATAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * *
15801852 TAAAAACTCGAAGTGTACGAGATTTTGTGGCCATTAGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
**
15801917 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
* *
15801982 TTTGATGAGGGATAGGGGGCCAATCTATGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
195 TTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * *
15802047 -ACACCCCCCGGCCCCTCCCGATC-TCCGGAACCTCATTGCC-ACTGGCCAGGTTCTTCGATGAT
259 AAC-CCCCCCGGCCCC-CCCGATCGT-CGGAACC-CAATGCCGTC-GGTCAGGTTCTCCGACGAT
* * * * *
15802109 GGTGTCCCGGCAAAGAAAAATTTC-ACACTAGCACATGCCCGAGCCCAACATGTGCTGCCGCAAC
319 GGTGTCCCGACAAAGAAAAA-TGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAAC
* * * * *
15802173 CCTCGGTCTGATCCAATCTTAGACTGGAAATGAACTCGGTATGCTTAGACTGGGAATGAACTCCA
383 CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * * *
15802238 TATGCCTAAGTCAACCCACAAAATGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGCGC
448 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGC
* ** * * * * *
15802303 AAGCCGTA-GATCGACCGGGTCCTTCTTTGCGTGCTGTCGATCCTGCTGCTGCAACCCTCGATCT
513 AAGCCG-AGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCC
* * * * * *
15802367 GGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGA
577 AGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
* * * *
15802432 CGGGCGGGCACTATGCCAGCCAGA-AGGGGGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGG
642 CGGGCGGGCACTACGCCGGCCAGAGA-GGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * *
15802496 CGGGTTTAGGCACATCTTTC-TATTTCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCAT
706 TGGGTTTAGGCACATC-TTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
* * *
15802560 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCCAGAGGACTCGTTTTCTATTTTTCACG
770 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* * * *
15802625 ATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTTAGAAAGA-
835 ATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * * * *
15802676 TATTTGGCCCCAACCTTAGTAGACGTGATCCTTGTATTTTTTTTGGCTTGCATAAAAAAATTCAG
1 T-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* **
15802741 CTACAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCCTCCCCATTTCAGACACTT
65 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
*
15802806 TAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAG
130 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAG
* * * *
15802871 GTTTGATGAGGGATAAGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGC
194 GTTTGATGAGGGATAGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * *
15802936 -A------C--ACCCCCCGATCGTCGGTACCCCAATG-CGACCGATCAGGTTCTCTGACGATGGT
259 AACCCCCCCGGCCCCCCCGATCGTCGG-AACCCAATGCCG-TCGGTCAGGTTCTCCGACGATGGT
* * * * * ** *
15802991 GTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGTCTAGCATGTGCTACCGTAA----C
322 GTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTC
15803052 ---CC--T-CGA---T---CT--G-AT---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATG
387 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
15803095 CCTAAGTCAACCCACGAAACGAGCATGCGGGCGTTTAGCCGGTCAGAGGGGCGGGATGTGCAAGC
452 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGC
** ** * * * * ** * ***
15803160 CGAGGATCAACTAGGTCCCCCTCTGCGAGCTACCAATCCTGCTACTACAACCCTCAGTTTGGTCC
517 CGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGTCC
* * * * * ** *
15803225 AATCATAGACTAGGAATGAACTTCATATGCCTAAGCCAATCGATTAAACGAGCGGGCGGACGGGC
582 GATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC
* * *
15803290 AGGCACTACGTCGGCCAGAGAGGCGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
647 GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * * *
15803355 TAGGCACATCTTCCTATTTCTATCGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGG
712 TAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGG
* * * *
15803420 TCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTG
777 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG
** * *
15803485 AAACTTTTTACGGTTCAAGATTTTTTTAAATTTTTTTAGAAGGAG
842 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
*
15803530 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * *
15803595 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTATCCCCATTTTAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*** * *
15803660 AATGGCTACTAATAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTCGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
* *
15803725 TTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCCCACATCATGTGCGC
195 TTTGATGAGGGAT-AGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * *
15803790 -ACACCCCCTGGCACCCCTCAATCG-CTGAAACCCAAATGCCGTCGGTCAGGTTCTCCAACGATG
259 AAC-CCCCCCGGC-CCCCCCGATCGTC-GGAACCC-AATGCCGTCGGTCAGGTTCTCCGACGATG
** * * * * *
15803853 GTGTCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGTATGTGCTGCCGTAACCC
320 GTGTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCC
* * * *
15803918 TCAGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTA
385 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * *
15803983 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGTG-AA
450 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAA
* ** * * * * * **
15804047 TGCCGGGGATCGATCGGGTCCCCCTTTACGTGCTACCGATCCTGCTGCTGCAACCCTCAGTCTGG
515 -GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAG
* * * * * *
15804112 TCCAATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGCCAACAGATGAAATGAGCGGGCGGGCG
579 TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
* * *
15804177 GGCGGGCACTACGTCGGCCAGAGAGGCGGGAAGCACAAGCCGTGGATCGATAGGGTGGTAGGTGG
644 GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * * * *
15804242 GTTTAGGCACATCTTCATATTTTTTCCGTGCCAATGTCATTTTTCTCGCATGTAAATTCATACAA
709 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
* *
15804307 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTACGATTT
774 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * *
15804372 TTGAAACTTTTTACGATT----ATTTTTTTAAATTTTTTCAGAAGGAG
839 TCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* *
15804416 TTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTGTTGGCATGCACAAAAACATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15804480 TAAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
15804545 AATGTCTACTGGTAGC-AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
131 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTTGAGG
*
15804609 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGC
195 TTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * *
15804674 -ACACCCCCCGACCCCCCCGATCATCGGAACTCCAATGCCGTGGGTCAGGTTCTCCGGCGATGCT
259 AAC-CCCCCCGGCCCCCCCGATCGTCGGAAC-CCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
* * * * ** *
15804738 ATCCCGACGAAGAAAAATACGGCACCAGTGCATGCCCGAGCCCAGCATGTGCTATCGCAACCCTC
322 GTCCCGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTC
* *
15804803 GGTCCGATCCAATCTTAGACTAGGAATGAACTCCGTATGC
387 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
15804843 CTAAGCCAAC
Statistics
Matches: 18721, Mismatches: 2931, Indels: 1632
0.80 0.13 0.07
Matches are distributed among these distances:
852 27 0.00
853 664 0.04
854 53 0.00
855 1 0.00
856 1 0.00
857 5 0.00
859 7 0.00
860 43 0.00
861 592 0.03
862 270 0.01
863 940 0.05
864 882 0.05
865 910 0.05
866 14 0.00
867 17 0.00
868 184 0.01
869 10 0.00
870 13 0.00
871 15 0.00
872 12 0.00
873 27 0.00
874 382 0.02
875 358 0.02
876 110 0.01
877 96 0.01
878 140 0.01
879 252 0.01
880 691 0.04
881 216 0.01
882 513 0.03
883 329 0.02
884 160 0.01
885 164 0.01
886 679 0.04
887 722 0.04
888 1472 0.08
889 1166 0.06
890 2641 0.14
891 1062 0.06
892 820 0.04
893 803 0.04
894 595 0.03
895 167 0.01
896 11 0.00
897 15 0.00
898 13 0.00
899 12 0.00
900 18 0.00
901 69 0.00
902 30 0.00
903 11 0.00
904 18 0.00
905 14 0.00
906 17 0.00
907 5 0.00
908 11 0.00
909 16 0.00
910 11 0.00
911 23 0.00
912 79 0.00
913 25 0.00
914 22 0.00
915 13 0.00
916 11 0.00
917 13 0.00
918 14 0.00
919 4 0.00
921 4 0.00
922 5 0.00
923 3 0.00
924 4 0.00
925 2 0.00
927 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (886 bp):
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTTGAGGT
TTGATGAGGGATAGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAA
CCCCCCCGGCCCCCCCGATCGTCGGAACCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCC
CGACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTC
CGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGAG
GATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCAGTCCGATC
TTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC
ACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
CACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAAC
TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
Found at i:15787058 original size:26 final size:26
Alignment explanation
Indices: 15787029--15787081 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15787019 CCGGTCCGAT
*
15787029 CTTAGACT-GCGAATGAACTCCGTATG
1 CTTAGACTAG-GAATAAACTCCGTATG
15787055 CTTAGACTAGGAATAAACTCCGTATG
1 CTTAGACTAGGAATAAACTCCGTATG
15787081 C
1 C
15787082 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATAAACTCCGTATG
Found at i:15787384 original size:185 final size:184
Alignment explanation
Indices: 15787006--15787428 Score: 512
Period size: 185 Copynumber: 2.3 Consensus size: 184
15786996 CATGTGCTAT
*
15787006 TGCAACCCTCGGTCCGGTCCGATCTTAGACTGCGAATGAACTCCGTATGCTTAGACTAGGAATAA
1 TGCAACCCTCAGTCCGGTCCGATCTTAGACTG-GAATGAACTCCGTATGCTTAGACTAGGAATAA
* * * * * *
15787071 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGCGCTCAGTCGGCCAGAGGGGTGGG
65 ACTCCGTATGACTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAGCCAGCCAGAGGGGCGGG
* * * *
15787136 ATGTGCAAGCCGGGGATCGACCGGCTCCCCCTCTACGTGCTGCTGATCCTGCTGC
130 ATGCGCAAGCCGGAGATCGACCGGCTCCCCCTCTAAGTGCTGCTGATCCTGCTGA
* * * * * *
15787191 TGCAACCCTCATTTCGGTCCCATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGA
1 TGCAACCCTCAGTCCGGTCCGATCTTAGACT-GGAATGAACTCCGTATGCTTAGACTAGGAATAA
* *
15787256 ACTTCGTATGACTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGG
65 ACTCCGTATGACTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAGCCAGCCAGAGGGGCGGG
** * * * *
15787321 ATGCGCAAGCTTGAGATC-AGTCGGGTCCCTCTCTAAGTGCT-ATCGATCCTAG-T-A
130 ATGCGCAAGCCGGAGATCGA-CCGGCTCCCCCTCTAAGTGCTGCT-GATCCT-GCTGA
* *
15787375 TGACAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
1 TG-CAACCCTCAGTCCGGTCCGATCTTAGACT-GGAATGAACTCCGTATGCTTA
15787429 AGCCAACCGA
Statistics
Matches: 201, Mismatches: 32, Indels: 10
0.83 0.13 0.04
Matches are distributed among these distances:
184 4 0.02
185 195 0.97
186 2 0.01
ACGTcount: A:0.23, C:0.28, G:0.27, T:0.22
Consensus pattern (184 bp):
TGCAACCCTCAGTCCGGTCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTAGGAATAAA
CTCCGTATGACTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAGCCAGCCAGAGGGGCGGGA
TGCGCAAGCCGGAGATCGACCGGCTCCCCCTCTAAGTGCTGCTGATCCTGCTGA
Found at i:15788132 original size:26 final size:26
Alignment explanation
Indices: 15788102--15788153 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15788092 TCCATCTGAT
15788102 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15788128 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15788154 ACTACGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15788514 original size:888 final size:887
Alignment explanation
Indices: 15787212--15804842 Score: 22197
Period size: 890 Copynumber: 20.0 Consensus size: 887
15787202 TTTCGGTCCC
* * * *
15787212 ATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTCGTATGACTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * ** *
15787277 CCACAAAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCTTGAGATC-AG
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-
* * ** ** * *
15787341 TCGGGTCCCTCTCTAAGTGCTATCGATCCTAG-TAT-GACAACCCTCGGTCCGGT-TCGATCTTA
129 CCGGGTCCCCCTCTGCGTGCTGCCGATCCT-GCTATCG-CAACCCTCAGTCTGGTCT-GATCTTA
* * *
15787403 GACTGGGAATGAACTCCGTATGCTTAAGCCAACCGACGAAACGAGCGGGCGGGTGGGTGGGCACT
191 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACT
* *
15787468 ACGTCGGCCAGAGAGGCGGGATGTGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
256 ACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * * * *
15787533 GTCTTTATATTTTTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACATTGGTCCCTTA
321 ATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTA
* *
15787598 AGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTT
386 AGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTT
* **
15787663 TTACGGTTCAGGATTTTTTAAAATTTTTTCAAAAACAGTTTTGGCCCCAAACTTGGTAGACGTGA
451 TTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
* * *
15787728 TCCTTGTATTTTTGTTGG-AGTGCACAACATAATTCAGCTAAAAACTTGAAGTGTACAAGATTTT
516 TCCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
15787792 GTGACCATTTGAAAAAAGTGTCCCCGTTTC-GAACACTTTAATGGCTACTAGCAGCAAACCTGTA
580 GTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTA
**
15787856 AAATCTCAAATGCTCTTTAAAAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
644 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
** *
15787921 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCTAGATCGTT
709 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTC
* * * * * *
15787986 GAAACGCCAATGCTGCCGGTTAGGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGGCACC
774 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACC
* *
15788051 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCATCTG
839 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCATCCG
* * *
15788100 ATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGACTACGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * ** *
15788165 CCACAAAACGAGCGTGCAGGTGCCCAGCCGGCCAGAGGGGCGGGTTGCATAAGCTGGGGATCGAC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * * **
15788230 CGGGTCCCCCTCTGTGTGCTGCTGATCCTACTATGGTAACCCTCAGTCTGGTCCAATCTTAGACT
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGACT
* * * *
15788295 GGGAATGAACTCCGTATGCTTAAGCCAACTGACG-AACTGAGCGGGCGGGCGGGCGGCCACTATG
195 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-GAGCGGGCGGGCGGGCGGGCACTACG
* * * * *
15788359 CCGGCCAGAGAGGCGGGATGCGTAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTAGATC
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * *
15788424 TTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCCTAAGC
324 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
*
15788489 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTCACGATTTTTAAAACTTTTTA
389 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTA
* * * *
15788554 CGGTTCGGGATTTTTTAAAATTTTTTCAAAAGCATTTTTGGCCCCAAACTTGGTAGACGTGATCC
454 CGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * * *
15788619 TTGTATTTTTGTTGGAATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTCTTA
519 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * *
15788684 CCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAACGGCTACT-ACTAGCAAACCTGTAAAAT
584 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC-AGCAAACCTGTAAAAT
* *
15788748 CTCAAATGCTCTTTAAGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAG
648 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * *
15788813 GGCCAAGTAGCAGCACCCATCGCACATTATGTGTGCACACCCCCCTGGCCCCCCCGATCGTCGGA
713 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGA
* ** * **
15788878 ACCCCAATGTCATCGGTCAGGTTCTCCGAC-ATTGGTGTCTCGGGGAAGAAAAATACGGCACCAT
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGA-TGGTGTCCCGATGAAGAAAAATACGGCA-C--
* * * ** *
15788942 CACGCACATGCCCGAGCCTAGCATGTGCTGTCGTAACCCTCGGTCTGGTCCA
838 CA-GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CATCCG
* * **
15788994 ATCTTAGACTGGGAATGAACTCCATTTGCTT-GACTGGGAATGAACTTTGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * *
15789058 CCACGAAACGAGCGTGCGTGTGCTCAGCTGACCAGAGGGGCGGGATGCACAAGGCAGGGATCGGC
66 CCACGAAACGAGCGTGCG-GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* ** * * * *
15789123 CGGGTCCCCCTCTGCATGCTATCGATCCGTTGCTGT-G--ACCCTTGATTC-GGTCCGATCTTAG
130 CGGGTCCCCCTCTGCGTGCTGCCGATCC--TGCTATCGCAACCC-TCAGTCTGGTCTGATCTTAG
* * * *
15789184 ACT-GGAATGAACTCCGTAAGCCTAAGCCAACCGACGAAACGAGTGGGCGGACGGGCTGGCACTA
192 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTA
* * * * **
15789248 CGTCGGCCAGAGAGGCGGGATACGGAAGCCGCGGATCGATAGGGCGGTAGGT-GG--TAGGCGGG
257 CGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC-AC
* *
15789310 ATGCGT-A-A-----GCCGTGCCAATGCCA-TTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
321 AT-CTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
* * *
15789367 AAGCCTTCATATGAAGTTTCGTGGCAAGA-GCACTCGTTTTCTATTTTTCACGATTTTTGAAACT
385 AAGCCTTCATGTGAAGTTTCATGGCAAGACG-ACTCGTTTTCTATTTTTCACGATTTTTAAAACT
* *
15789431 TTTTACGGTTCAGGATTTTTTAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACCT
449 TTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* * **
15789496 GATCCTTGTATTTTTGTTAGCATGCACAAAACAATTCAGCTAAAAACTCGAACCGTACAAGATTT
514 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
15789561 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
579 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
15789626 AAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
644 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * *
15789691 TAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCCGACCGCCCTGATCG
709 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCG
* * * ** *
15789756 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCAATGGTGTCCCGGTGAAGAAAAATGTGACA
772 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCA
* * * * ** *
15789821 CCAGCACATGCCCGAGCCCAGCATGTACTACCGTAACCCCCGGTCTGGTCCA
837 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CATCCG
* * * * *
15789873 ATCTTAGACTGTGAATGAACTCCATATTCCTAGACTAGGAATGAACTCCGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * ** * *
15789938 CCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCGGGATGCATAAGCCAGGGATCGGC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * * * * *
15790003 CGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAATCGTCGGTCCGGTCCGATCTTAGATT
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGACT
* * * *
15790068 GGGAATGAACTCCGTATGCCTAAGCCAACCCACGAAACGAGCGGGCGGACGGGCGGGAACTACGC
195 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGT
* *
15790133 CGGCCAGAGAGGCGGGATGTGCAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCT
260 CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* * *
15790198 TCATATTTCTGCCATGCCAATACCATTTTTCTGACTTTTAAATTCATACAATGGTCCCTTAAGCC
325 TCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* *
15790263 TTCATGTGAAGTTTCATGGCAAGACGACTCGTTATCTATTTTTCATGATTTTTAAAACTTTTTAC
390 TTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAC
* * **
15790328 GTTTCAGGATTTTTTAAACTTTTTTCAGAAGGAGTTTTGGCCCCAAACAAGGTAGACGTGATCCT
455 GGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* * * *
15790393 TGTTTTTTTTTTTGGCATGCACAAAAAAATTCAGCCAAAAACTCGAAGGGTACAAGATTTTGTGA
520 TG-TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* *
15790458 CCATTTGAAAAAAGTATCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
584 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
*
15790523 TCAAATGCTCTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
649 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * ** * * *
15790588 GCCATGTACCAGCTCCCATCGCACATCATGCGCGCACACCCCCCCCGATCGCTCTGATCGTCGGA
714 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGTCGGA
* * * * * *
15790653 ACCCCAATGCCGTCGGTCAAGTTCTCCGGCAAAGGTGTGCCGATGAAGAAAAATACGGCACCAGC
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGC
* * * * *
15790718 ACATGCCCAAGCCCAGCGTGTGCTACCGTAACCCTCGGTCTAGTCCG
842 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCA-TCCG
* *
15790765 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACCCCGTATGCCTAAGTCAAG
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * * **
15790830 CCACAAAACGAGCATGCGGGCACTCAGTCGACCAGAGGGGCCGGATGCGTAAGCCAAGGATCGAC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * *
15790895 CGGGTCTCCCTCTGCGTGCTGTCGATCCTACTACCGCAACCCT-AGGT-TCGATCTGATCTTAGA
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCA-GTCT-GGTCTGATCTTAGA
* * * * *
15790958 CTGGGAATGAACTCTGTATGCCTATGCGAA-CGAACGAAACGAGCGGGTGGGCGGCCGGGCACTA
193 CTGGGAATGAACTCCGTATGCCTAAGCCAACCG-ACGAAACGAGCGGGCGGGCGGGCGGGCACTA
** * * * * *
15791022 CACCAGCCAGAGAGGCGGGATCCGCAAGTCGAGGATCGATAGGGTGGTAGGTTGGTTTAGGCACA
257 CGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* *
15791087 TCTTCATATTTCTGCCATACCAATGCCATTTTTCTGGCCTGTAAATTCATACAATGGTCCCTTAA
322 TCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * *
15791152 GCCTTCATGTGAAGTTTCATGCCAAGATGACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTT
387 GCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTT
* * * *
15791217 TACGGTTCAGGATTTTTT-AAAGTCTTACAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGCGAT
452 TACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * * *
15791281 CCTTGTACTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTTGAACTTTACAAGATTTTGT
517 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
*
15791346 GACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
582 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* * *
15791411 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGTTTTGATGAGGGATAAGGGGCCAACATAA
647 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
** * *
15791476 CAGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCACCCCCCAATCGTCGG
712 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC-CCCCCCGATCGTCGG
* * ** *
15791541 AACCCCAATGCCGCCAGTCAGGTTCTCCGACGATGGTATCCCGATGAAGAAAAATGTGGCACTAG
776 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAG
* * * *
15791606 CACATGGCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGACCAATCTG
841 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-ATCCG
* * * *
15791654 ATCTTAGACTGGGAATGAACTCCATATGCTTGGACTGGGAATGAACTTCGTATGTCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * *
15791719 CCATGAAACGAACGTGCGGGCTCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGAGGATCGGC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * ** ** * *
15791784 TGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTTGGTCCGGTCTGGTCTTAGACT
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGACT
* * * *
15791849 GGGAATTAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGTGGGTGGGCGGGCACTACGT
195 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGT
15791914 CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
260 CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
** *
15791979 TCATATTTCTGCTGTGCCAATGCCATTTTTCTGGTTTGTAAATTCATACAATGGTCCCTTAAGCC
325 TCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * * *
15792044 TTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCAAGATTTTCAAAACTTTTTAT
390 TTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAC
* * *
15792109 GGTTCAAGATTTTTTAAAATTTTTTCAGAAGTATTTTTGGCCCCAAACATT-GTAGACGTGATCC
455 GGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCC
* * * * *
15792173 TTGTATTTTTATTGGCACGCACAAAAAAATTTAGCTAAAAACTCTAAGTATACAAGATTTTGTGA
519 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
15792238 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
584 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
15792303 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGG
649 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * * *
15792367 GCCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCTGACCCCTCCGATCGCCGGAAC
714 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
* * * *
15792432 CCCAATGTCGTCGGTCAGGTTCTCCGATGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCAC
779 CCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCAC
* * * *
15792497 GTGCCTGAGACCAGCATGTGCTGCCACAACCCTC-G-------G
844 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCATCCG
* *
15792533 -TC-----C-----A-G---TCCG-AT-CTTAGACAGGGAATGAACTCTGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* ** * * ** ***
15792581 CCATGAAACGAGCGTATGGCGCTCACCCGGCCAGAGGGGCGAGATGCATAAGCCGATCATCGACC
66 CCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC
** * * ** * *
15792646 GGGTTTCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGATTG
131 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGACTG
* * ** *
15792711 GGAATGAACTCCGTATGCCTAAGCGAACCGACAAAACGAGCGGGCAAGCGGGCGGGCACTACGCC
196 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTC
* *
15792776 GGCAAGAGAGGCGGGATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
261 GGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * *
15792841 CATATTTCTGCCATGCCAATGCCA-TTTTCTTGGTTTCTAAATTCATACAATGGTCCCTTTAGCC
326 CATATTTCTGCCATGCCAATGCCATTTTTC-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* *
15792905 TTCATGAGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
390 TTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAC
* * * * * *
15792970 GATTCGGGATTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCCAAACTTAGTAGACATGATCCT
455 GGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* *
15793035 TGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTGCAAGATTTTGTGAC
520 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
15793100 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
585 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
15793165 CAAATGCTCTTTAAGGGGGTGTGAGTTTTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
650 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * *
15793230 CCAAGCACCAGCACCCATTGCACATCATGTGTGCACA---------CCCCCCGATCTTCGGAACC
715 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACC
* * *
15793286 CCAATACCGCCGGTCAGCTTCTCCGACGATGATGTCCCGATGAAGAAAAATACGGCACCAGCACA
780 CCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCACA
* * * *
15793351 T-CCCGAGCCCAACATGTGCTGCCACAACCCTCGGTCCGGTTCG
845 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-ATCCG
* * *
15793394 ATCTTAGACTGGGAATGAACCCCGTATGTTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * *
15793459 CCACGACACGAGCGTGCGAACGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGAGGATCGCC
66 CCACGAAACGAGCGTGCG-GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* ** * ** * * * * **
15793524 CGGGTCCCCTTCTATGT-ATGCCTAAGATCGGGATGT-GGAACCCTCGGTCTGGTCCAATCTTAG
130 CGGGTCCCCCTCTGCGTGCTGCC---GATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAG
* * * * *
15793587 ACTGCGAAAGAACTCCGTATGCCTAAGCCAACTGATGAAACGAGCGGACGGGCGGGCGGGCACTA
192 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTA
* * * *
15793652 CGCCGGCCCGAGAGGCGGGATGCGCAAACCGTGGATCGAAAGGGTGGTAGGTGGGTTTAGGCACA
257 CGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* * *
15793717 TCTTCATATTTCTGCCATGCTAATACCATTTTTCTGGCTTGTAAATTCATACATTGGTCCCTTAA
322 TCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAA
* * *
15793782 GCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACCATTTTTGAAACTTTT
387 GCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTT
* * * * * *
15793847 TACGGTTCGGGATTTTTTAAAATTTTTTCAG-AGTGAGTTTTGGCCACAAACTCGATAGATGTCA
452 TACGGTTCAGGATTTTTTAAAATTTTTTCAGAAG-GAGTTTTGGCCCCAAACTTGGTAGACGTGA
* * * * *
15793911 TCATTGTATTTTTGTTGGCATGTACGAAACAATTCAACTAAAAACTCGAAGTGTACAAGATTTTG
516 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* *
15793976 TGACCATTTGAAAAAAGTGTGCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAA
581 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * * *
15794041 ATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGTTGTGTGATAGGGGGCCAACATA
646 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
15794106 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTCGGCCCCCCCGATCGT-
711 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCGTC
* * * * * * * **
15794170 TGAACCCTAATGTCGTCGGTTAGGTTCTCCGATGATGGTGTCCCGGTGAAGAAAAATGTGGCACC
774 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACC
* * * *
15794235 AGCACATGTCCGAGCTCAGCATGTGCTGTCGTAACCCTC-G-------G
839 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCATCCG
* *
15794276 ---TT---C---G---G---TCCG-AT-CTTAGACTGGGAATGAAATCCGAATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * *
15794324 CCAC-AAGACGAGCGTGCGGGCACTCAGCCGTCGAGAGGGGTGGGATGCGCAAGCCTGGGATCGA
66 CCACGAA-ACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA
* * * *** ** ** * *
15794388 TCGGGTCCTCCTTTGCGTGCTATTGATCCTGCTGCCGCAACCCTTGGTCCGATCTGATCTTAGAC
129 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGAC
* * * *
15794453 TGGGAAAGAACT-CATATGCCTAAGCCAACCGATGAAACGGGCGGGCGGGCGGGCGGGCACTACG
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * * *
15794517 CCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATTGATAGGGTGGTTGGTGGCTTTAGGCACATC
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* **
15794582 TTC-TCATTTTTGCTGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG
324 TTCAT-ATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
15794646 CCTTCATGTGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTTACGATTTTCAAAACTTTTT
388 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTT
* *
15794711 ACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAATTTGGTAGACGTGATC
453 ACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * *
15794776 CTTTTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAAATCTG-AGTGTACAAGATTTTGT
518 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC-GAAGTGTACAAGATTTTGT
* * * *
15794840 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACATTAATAGATACTGGCAGTAAACCTGTAAAA
582 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
15794905 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
647 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * **
15794970 GGGCCAAGTACCAGCACCAATCGCACATCTTGTGCGCACACCCCCCGGCCCCCCCGATCGTCAAA
712 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGA
* * *
15795035 ACCCCAATACCGCCGGTCAGGTTCTCC-AGCGATGATGTCTCGATGAAGAAAAATACGGCACCAG
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGA-CGATGGTGTCCCGATGAAGAAAAATACGGCACCAG
* * * *
15795099 TACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTAGGTCCGATCCA
841 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-ATCCG
* *
15795147 ATCTTAGACTGGGAATGGACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * * *
15795212 CCACAAAACGAGCATGCGGGCGTTCAGTCGACCAGAGGGGCGAGATGCACAAGCCGGGGATCGGC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * * * * * *
15795277 CAGGTCCCCCTTTGTGTGCTGTCGATCTTGCTACCGTAATCCT-TGCTCTGGTCTGATCTTAGAC
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAG-TCTGGTCTGATCTTAGAC
* * *
15795341 TGGGAAGGAACTCCGTATGTCTAAGCCAACCGATGAAACGAGCGGGCGGGGGGACGGGCGGGCAC
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC---GGG-CGGGCGGGCAC
* * * * *
15795406 TATGTCAGCCCGAGAGGCGGGATGCACAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
255 TACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
*** *
15795471 CATCTTCATATTTCTGTGGTGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
320 CATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
* *
15795536 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTAT-AATTTTTCACGATTTTCAAAACT
385 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT-TCTATTTTTCACGATTTTTAAAACT
* * * * * *
15795600 TTTTACAGTTCAGGATTTTTTAAAAATTTTTCAGAATGAGTTTTGGACCCAAACATGGTAGACAT
449 TTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* *
15795665 GATCCCTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
514 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
*
15795730 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTA
579 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* ** *
15795795 AAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATATCGGGCCAAAA
644 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * **
15795860 TAAGGGCCAAGTACTAGTACCCATCGCACATCATGTGTGCACACCCCCCCGGCCCCCTTGATCGT
709 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGT
* * * * * *
15795925 TGGAACCCCATTGCCGCCGGTCAGGTTCTTCGACGATGGTGTCCCGACGAAGGAAAATGCGGCAC
773 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCAC
* *
15795990 CAGCACATGCCCGAGCCTAGCATGTGCTGCCACAACCCTC-G-------G
838 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCATCCG
*
15796032 ---TT----T--G---G---TCCG-AT-CTTCGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * *
15796080 TCACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGAT
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * * *
15796145 CGTGTCCCCCAT-TGCATACTACCGATCCTGCTGGT-GCAACCCTCAATCTGGTCTGATCTTAGA
130 CGGGTCCCCC-TCTGCGTGCTGCCGATCCTGCT-ATCGCAACCCTCAGTCTGGTCTGATCTTAGA
* * *
15796208 TTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGAGCGGGCGGGCACTAC
193 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTAC
* * * **
15796273 GCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTGGGTGCATTTAGGCACAT
258 GTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *
15796338 CTTCATATTTCTG-CAGTGCCAATACCATTTTTCTGGCTTGTAACTTCATACAATGGTCCCTTAA
323 CTTCATATTTCTGCCA-TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * **
15796402 GCCTCCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTT
387 GCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTT
* * * *
15796467 TACGATTCAGGATTTTTTTAAATTTTTTCAAAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGAT
452 TACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * *
15796532 CCTTGTATTTTTTTTGGCATGCATAATAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGT
517 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
15796597 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
582 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* * *
15796662 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTCATGAGGGATAGGGGGCCAACATAA
647 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* ** * *
15796727 AGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTTGGCCCCCCCGATGGCCGGA
712 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGA
** * ** * * *
15796792 ACCCCAATGCCATCGATCAGGTTCTTTGACGATGGTGTCCCGGTGAAGAAAAATGCGACACCAGC
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGC
* ** ** *
15796857 ACATGCCCGAGCCCAG-ATGTGCTACATCAACCCTCGGTCTGGTTCG
842 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CATCCG
* * * * *
15796903 ATGTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGGCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * **
15796968 CCACGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGGCGGGAGGCGCAAGTCGGGGATCGGT
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* ** **
15797033 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTTGGT-TCGGTCTGATCTTAGAC
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCT-GGTCTGATCTTAGAC
* *
15797097 TAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGAGCACTACG
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * *
15797162 CCGGCCAAAGAGGCGGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * *
15797227 TTCATATTTCTACCATGCCAATGCCA-TTTTCTGGCTTGTAAATTCATACAACGGTCCCCTAAGC
324 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
15797291 CTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA
389 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTA
* * *
15797356 CGGTTCAAGATTTTTTTAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
454 CGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
*
15797421 TTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
519 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * *
15797486 CCATTTGAAAAAAGTGTCCCCAATTCAGACACTTTAATGGCTACCGTCAGTAAACCTGTAAAATC
584 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
*
15797551 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGG
649 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * *
15797616 GCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAGCCCCCCCGGTCCCCCCAATCGTCGGA
714 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGTCGGA
* * * ** *
15797681 ACCCCAATGTCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGAAAGCAGC
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGC
* * * * * ** * * *
15797746 AAATGCCCAAGCCCAACATTTGCTGCCGTAACCCTCAATCTGATTCT
842 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CATCCG
** *
15797793 ATCTTAGGTTGGGAATGAACTCCGTATGCTTAGCCTGGGAATGAACTCCGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * ** * * **
15797858 CCACAAAACGAGCGTGCGGGCGCTTAGCAAGCTAGAGGGGCGGGATGTGCAAGCCGGGGATCTTC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * * * *
15797923 CAGGTCCCCCTCTGTGTGCTGTCGATCCTACTACCGTAACCCTCGATTC-GGTCTGATCTTAGAC
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTC-AGTCTGGTCTGATCTTAGAC
* * * *
15797987 TAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGACACTACG
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * *
15798052 TCGGCCAGAGAGGCGGGATACGTAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* **
15798117 TTCATATTTCTACCGCGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
324 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
15798182 CTTCATGTGAAGTTTCATGGCAAGACGA--C----TC-A-TTTT--C------T---A---TTT-
389 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTA
* * * * *** *
15798224 ---TTCATGATTTTTTAAAACTTTTTCAAAAGGACTTTCAACCCCAAACTTGGCAGACGTGATCC
454 CGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* *
15798286 TTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTAA
519 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * * *
15798351 GCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATTGCTACTGACAGCAAACTTGTAAAATC
584 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * * *
15798416 TCAAATGCTCTTTAAGAGGGTGTGAGTTTTCAAGGTTTGATGAGGGATAGGGGGCCAATATAACG
649 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * ** ** *
15798481 GCCAAGTACCGGCACCCATCGCACATCATGTGCGCACACCCCCCTCGGTCGCCTTGATCACCGTA
714 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCGTCGGA
* * * * * * *
15798546 ACCCCAATGTCGTCGATCAGGTTCTCCGACGATTGTGTCCCGACGAAGAAAAATATGACACCAGC
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGC
* * * * *
15798611 ACATGCTCGATCCCAGCTTGTGCAGCCGCAACCCTCGGTCCGGTCCG
842 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-ATCCG
* **
15798658 ATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTTGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * * * * * *
15798723 CCCCAAAAAGAGCGTGCGGGTGCTCTGTCGACCAGGGGGGCCGGATGCGCAAGCTGGTGATCGAC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * ** * * ** *
15798788 CGGGTCCCCCTCTGTGTGCTGCCAATCCTGTTGCCACAACCCTC-GATCTGATCCCATCTTTGAC
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAG-TCTGGTCTGATCTTAGAC
* * * * * *
15798852 TGGGAATGAACTCCGTATGCCTAAGCCAATCGACAAAACGAGCAGGCGGGTGGGTGGGCACTACA
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * * *
15798917 TCGGCCAGAGAGACGGGATGCGAAAGCCGTGGATCAATAGGGTGATAGGTGGGTTTAGGCACATC
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* *
15798982 TTCATGTTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTGAAGC
324 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
15799047 CTTCATGTGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
389 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTA
* * * * *
15799112 CAGTTCGGGATTTTATAAAATTTTTTCAGAAGGTGTTTTGGACCCAAACTTGGTAGACGTGATCC
454 CGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
*
15799177 TTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
519 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
15799242 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACCT-GCAGCAAACCTGTAAAAT
584 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA-CTGGCAGCAAACCTGTAAAAT
*
15799306 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAG
648 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * * *
15799371 GGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCCCAGCCCCCCCCGATCGTTGAA
713 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGA
* * * ** *** * *
15799436 ACCCTAATGCCGTCTGTCAGGTTCTCCGGTGATGGTGTCCCGGCAAAGAAAAATGCAGCACCAGC
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGC
* *
15799501 ACATGCTCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAGTCCG
842 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCA-TCCG
* * * *
15799548 ATCTTAGACTGGGAATGAACTCCATATGCTTTGATTGGGAATGAACTCCGTATGCCTAAGCCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * *
15799613 CCACGAAACGAGCGTGTGG-GCATTCAGTCGGCCAGAAGGGCGGGATGCGTAAGCCGGGGATCGA
66 CCACGAAACGAGCGTGCGGCGC--TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA
* ** *
15799677 CCGGGTCCCCCTCAGCGTGCTATCGATCCTGCT-GCTGCAACCCT-AGGTCTAGG-CTGATCTTA
129 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATC-GCAACCCTCA-GTCT-GGTCTGATCTTA
* *
15799739 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGAGCGGGCACT
191 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACT
* *
15799804 ACGACGGCCAGAGAGGCGGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
256 ACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * *
15799869 ATCTTCATATTTCTACCATGCCAATGCCAATTTTCTGGCTTGTAAATTCATACAATGGTCCCCTA
321 ATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTA
* * *
15799934 AGCCTTCAAGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTT
386 AGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTT
* *
15799999 TTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGACCCCAAACTTGGTAGACGTGA
451 TTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
** ** *
15800064 TCCTTGTATTTTTGTTGGCATGCGTAAAATGATTCAGCTAAAAATTTC-AAGTGTACAAGATTTT
516 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA-CTCGAAGTGTACAAGATTTT
* ** *
15800128 GTGACCATTTGAAAAAAGTGTCCGCATTTCAGACACTTTAATGGCTACTGAAAGCAAACCTGTAG
580 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* * *
15800193 AATCTCAAATGCTCTTTAAGAGGGTTTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATAT
645 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * **
15800258 AAGTTG--AAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACC
710 AAG-GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTC
* * ** * * * *
15800321 GAAATCCCAATGCTACCGGTCAGGTTCTCTGGCGATGATGTCCC-AGTGAA-AAAAATGCGGCAC
774 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGA-TGAAGAAAAATACGGCAC
* * * *
15800384 CAGCACATGCCCGAGCCTAGCATGTGCTGCCACAACCCTTGGTCCATTCTG
838 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCA-TCCG
* *
15800435 ACCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * *
15800500 CCATGAAACGAGCGGGCGGCGCTCAGCCGGCCAGAGGGGCGGGATGTG-AATACCGGGGATCGAT
66 CCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA-GCCGGGGATCGAC
* * * **
15800564 CGGGTCCCCCTTTGCGTGCTACCGATCCTGCT-GCTGCAACCCTCAGTCTGGTCCAATCTTAGAC
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATC-GCAACCCTCAGTCTGGTCTGATCTTAGAC
* * * * *
15800628 TGGGAATGAACTCCGTTTGCCTAAGCCAACAGATGAAATGAGCGGGCGGGCGGGCAGGCACTACG
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* *
15800693 TCGGCCAGAGAGGCGGGATGCACAAGCCGTGGATC-AGTAGGGTGCTAGGTGGGTTTAGGCACAT
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-TAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
15800757 CTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCTTTAAG
323 CTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG
* *
15800822 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT
388 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTT
*
15800887 ACGGTTC-GAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGAT
453 ACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* *
15800951 CCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGT
517 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* * *
15801016 CACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACTTGTAAAA
582 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* * *
15801081 TCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCCAATATAA
647 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * *
15801146 GGGCCAAGTACCAGTACCCATCCCACATCGTGTGCGCACACCCCCCGGCCCCCCCGATC-TCCGG
712 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGT-CGG
* * * ** * *
15801210 AACCTCAATGCCGTCGGTCAGGTTCTTCGGTGATGGTGTCCCGGTGAAGAAAAATACGACACCAG
776 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAG
* * * *
15801275 CACATGCCCAAGCCCAGTATGTGTTGCCGTAA-CC-C--T-CA---G
841 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCATCCG
*
15801314 -TC-----C------T--A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* ** ** * * * * *
15801362 CCACAAAACGAGCAGT-CGAGCGGGCAGTTGACCAAAAGGGCGGGATGCGCAAGTCGGGGATCGG
66 CCACGAAACGAGC-GTGCG-GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA
* * * * *
15801426 TCGGGTCCCCCTCTACGTGCTGCCGATCCTACTGTCGCAACCCTCGGTCTGGTCTGATCTTAGAC
129 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGAC
* * *
15801491 TAGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCACTACG
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
** * * *
15801556 TCTACCACAGAGGCTGCATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * * *
15801621 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGCCTTTTAAATTCATACAACGGTCCCGTAAGC
324 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
15801686 CTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTATATTTTTCACGATTTTTAAAACTTTTTG
389 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTA
* * * * * * *
15801751 CAGTTCGGGATTTTTCAAAATTTTTTTTAGAAGGAGTTTCGGCCTCAAACTTGGTAGACATGATC
454 CGGTTCAGGATTTTTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * * * *
15801816 CTTCTATTTTTATTAGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACGAGATTTTGTG
518 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
15801881 GCCATTAGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
583 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * *
15801946 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATCTATG
648 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
15802011 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCTCCCGATC-TCCGG
713 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCCGATCGT-CGG
* * * * * * * *** * * *
15802075 AACCTCATTGCCACTGGCCAGGTTCTTCGATGATGGTGTCCCGGCAAAGAAAAATTTC-ACACTA
776 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAA-TACGGCACCA
* * *
15802139 GCACATGCCCGAGCCCAACATGTGCTGCCGCAACCCTCGGTCTGATCCA
840 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CATCCG
* * *
15802188 ATCTTAGACTGGAAATGAACTCGGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * **
15802253 CCACAAAATGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGCGCAAGCCGTAGATCGAC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
** * * *
15802318 CGGGTCCTTCTTTGCGTGCTGTCGATCCTGCT-GCTGCAACCCTC-GATCTGGTCTGATCTTAGA
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATC-GCAACCCTCAG-TCTGGTCTGATCTTAGA
* * * *
15802381 CTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGACGGGCGGGCACTAT
193 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTAC
* * * * *
15802446 GCCAGCCAGA-AGGGGGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGCGGGTTTAGGCACA
258 GTCGGCCAGAGA-GGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
*
15802510 TCTTTC-TATTTCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTA
322 TC-TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTA
* * * *
15802574 AGCCTTCATGTGAAGTTTAATGGCCAGAGGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
386 AGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTT
* * * *
15802639 TTACGGTTCAGGATTTTTTAAAATTTTTTTAGAAAGA-TATTTGGCCCCAACCTTAGTAGACGTG
451 TTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGT-TTTGGCCCCAAACTTGGTAGACGTG
* * * *
15802703 ATCCTTGTATTTTTTTTGGCTTGCATAAAAAAATTCAGCTACAAACTCGAAGTGTACAAGATTTT
515 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
** *
15802768 GTGACCATTTGAAAAAAGCCTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAA
580 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* * *
15802833 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA-AGGGCCAATAA
645 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
*
15802897 AAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACA---------CCCCCCGATCGTCG
710 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCG
* * * *
15802953 GTACCCCAATG-CGACCGATCAGGTTCTCTGACGATGGTGTCCCGACGAAGAAAAATACGGCACC
775 GAACCCCAATGCCG-CCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACC
* * * *
15803017 AGCACATGCCCGAGTCTAGCATGTGCTACCGTAA----C---CC-T-CG
839 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCATCCG
15803057 A---T---CT--G-AT---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * *
15803106 CCACGAAACGAGCATGCGGGCGTTTAGCCGGTCAGAGGGGCGGGATGTGCAAGCCGAGGATCAAC
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
** * * * * * ** *
15803171 TAGGTCCCCCTCTGCGAGCTACCAATCCTGCTA-CTACAACCCTCAGTTTGGTCCAATCATAGAC
130 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATC-GCAACCCTCAGTCTGGTCTGATCTTAGAC
* * * * ** * *
15803235 TAGGAATGAACTTCATATGCCTAAGCCAATCGATTAAACGAGCGGGCGGACGGGCAGGCACTACG
194 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
*
15803300 TCGGCCAGAGAGGCGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
259 TCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* ** * *
15803365 TTCCTATTTCTATCGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
324 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * *
15803430 CTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTA
389 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTA
* * *
15803495 CGGTTCAAGATTTTTTTAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
454 CGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
*
15803560 TTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
519 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * ***
15803625 CCATTTGAAAAAGGTATCCCCATTTTAGACACTTTAATGGCTACTAATAGCAAACCTGTAAAATC
584 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* *
15803690 TCAAATGCTCTTTAAGGGGGTGTGAGCTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGG
649 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * * *
15803755 GCCAAGTACCAGCACCCATCCCACATCATGTGCGCACACCCCCTGGCACCCCTCAATCG-CTGAA
714 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC-CCCCCCGATCGTC-GGA
* * *
15803819 ACCCAAATGCCGTCGGTCAGGTTCTCCAACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGC
777 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGC
* * * * *
15803884 ACATGCCCGAGCCCAGTATGTGCTGCCGTAACCCTCAGTCCGGTCTG
842 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-ATCCG
*
15803931 ATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* *
15803996 CCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGTG-AATGCCGGGGATCGA
66 CCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA-GCCGGGGATCGA
* * * * * **
15804060 TCGGGTCCCCCTTTACGTGCTACCGATCCTGCT-GCTGCAACCCTCAGTCTGGTCCAATCTTAGA
129 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATC-GCAACCCTCAGTCTGGTCTGATCTTAGA
* * * *
15804124 CTGGGAATGAACTCCGTTTGCCTAAGCCAACAGATGAAATGAGCGGGCGGGCGGGCGGGCACTAC
193 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTAC
* *
15804189 GTCGGCCAGAGAGGCGGGAAGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
258 GTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * * * * *
15804254 CTTCATATTTTTTCCGTGCCAATGTCATTTTTCTCGCATGTAAATTCATACAATGGTCCCTTAAG
323 CTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
15804319 CCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTACGATTTTTGAAACTTTTT
388 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTT
* * *
15804384 ACGATT----ATTTTTTTAAATTTTTTCAGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATC
453 ACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* *
15804445 CTTGTA-TTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTC
518 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
15804509 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGTCTACTGGTAGC-AACCTGTAAAAT
583 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
*
15804573 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
648 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * *
15804638 GGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCATCGGAA
713 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAA
* ** * * * * **
15804703 CTCCAATGCCGTGGGTCAGGTTCTCCGGCGATGCTATCCCGACGAAGAAAAATACGGCACCAGTG
778 CCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCA
** *
15804768 CATGCCCGAGCCCAGCATGTGCTATCGCAACCCTCGGTCCGATCCA
843 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-ATCCG
*
15804814 ATCTTAGACTAGGAATGAACTCCGTATGC
1 ATCTTAGACTGGGAATGAACTCCGTATGC
15804843 CTAAGCCAAC
Statistics
Matches: 14613, Mismatches: 1790, Indels: 685
0.86 0.10 0.04
Matches are distributed among these distances:
852 31 0.00
853 664 0.05
854 54 0.00
855 1 0.00
857 2 0.00
860 9 0.00
861 573 0.04
862 249 0.02
863 929 0.06
864 879 0.06
865 919 0.06
866 9 0.00
867 8 0.00
868 178 0.01
869 9 0.00
870 6 0.00
871 6 0.00
872 4 0.00
873 10 0.00
874 6 0.00
875 4 0.00
876 5 0.00
877 4 0.00
878 62 0.00
879 210 0.01
880 650 0.04
881 31 0.00
882 473 0.03
883 224 0.02
884 132 0.01
885 118 0.01
886 629 0.04
887 613 0.04
888 1309 0.09
889 872 0.06
890 2150 0.15
891 1047 0.07
892 781 0.05
893 607 0.04
894 141 0.01
895 5 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (887 bp):
ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
CCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC
GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGACTG
GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTC
GGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
CATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
GTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCC
CAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCACAT
GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCATCCG
Found at i:15789906 original size:26 final size:26
Alignment explanation
Indices: 15789877--15789930 Score: 74
Period size: 26 Copynumber: 2.1 Consensus size: 26
15789867 GGTCCAATCT
*
15789877 TAGACT-GTGAATGAACTCCATATTCC
1 TAGACTAG-GAATGAACTCCATATGCC
*
15789903 TAGACTAGGAATGAACTCCGTATGCC
1 TAGACTAGGAATGAACTCCATATGCC
15789929 TA
1 TA
15789931 AGTCAACCCA
Statistics
Matches: 25, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.31, C:0.22, G:0.19, T:0.28
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCATATGCC
Found at i:15790796 original size:26 final size:26
Alignment explanation
Indices: 15790767--15790819 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15790757 CTAGTCCGAT
*
15790767 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACCCCGTATG
15790793 CTTAGACTGGGAATGAACCCCGTATG
1 CTTAGACTGGGAATGAACCCCGTATG
15790819 C
1 C
15790820 CTAAGTCAAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACCCCGTATG
Found at i:15793434 original size:26 final size:26
Alignment explanation
Indices: 15793397--15793447 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15793387 CGGTTCGATC
*
15793397 TTAGACTGGGAATGAACCCCGTATGT
1 TTAGACTAGGAATGAACCCCGTATGT
*
15793423 TTAGACTAGGAATGAACTCCGTATG
1 TTAGACTAGGAATGAACCCCGTATG
15793448 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TTAGACTAGGAATGAACCCCGTATGT
Found at i:15795178 original size:26 final size:26
Alignment explanation
Indices: 15795149--15795201 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15795139 CCGATCCAAT
*
15795149 CTTAGACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15795175 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15795201 C
1 C
15795202 CCAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15796942 original size:26 final size:26
Alignment explanation
Indices: 15796906--15796956 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15796896 TGGTTCGATG
*
15796906 TTAGACTAGGAATGAACTCCGTATGC
1 TTAGACTAGGAATGAACTCCATATGC
15796932 TTAGACTAGGAATGAACTCCATATG
1 TTAGACTAGGAATGAACTCCATATG
15796957 GCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.33, C:0.18, G:0.22, T:0.27
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCATATGC
Found at i:15800473 original size:26 final size:26
Alignment explanation
Indices: 15800437--15800489 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15800427 CCATTCTGAC
*
15800437 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15800463 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15800489 C
1 C
15800490 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15802241 original size:26 final size:26
Alignment explanation
Indices: 15802190--15802242 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15802180 CTGATCCAAT
**
15802190 CTTAGACTGGAAATGAACTCGGTATG
1 CTTAGACTGGAAATGAACTCCATATG
*
15802216 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGAAATGAACTCCATATG
15802242 C
1 C
15802243 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCATATG
Found at i:15803969 original size:26 final size:26
Alignment explanation
Indices: 15803933--15803985 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15803923 CCGGTCTGAT
*
15803933 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15803959 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15803985 C
1 C
15803986 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15805560 original size:26 final size:26
Alignment explanation
Indices: 15805522--15805574 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15805512 CCAGTTCAAT
* * *
15805522 CTTAGCCTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15805548 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15805574 C
1 C
15805575 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15806447 original size:26 final size:26
Alignment explanation
Indices: 15806411--15806463 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15806401 CTGGTCCGAT
* *
15806411 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15806437 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15806463 C
1 C
15806464 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15807697 original size:874 final size:879
Alignment explanation
Indices: 15804789--15808493 Score: 4961
Period size: 874 Copynumber: 4.2 Consensus size: 879
15804779 CCAGCATGTG
** *
15804789 CTATCGCAACCCTCGGTCC-GATCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA-
1 CTATCGCAACCCTCGGTCCAG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * ** *
15804852 CGACGAAATGAGCTGGCGGGCGGGCGGGCACTACACCAGCGAGAGAGTTGGGATGCGCAAGCCAT
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCC-GCCAGAGAGGCGGGATGCGCAAGCCGT
* *
15804917 GGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
129 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-TATGCCAATGCCATTTT
*
15804982 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCATGTGAAGTTTCATGGCAAGACGACT
193 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * * * *
15805047 CATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTATACAATTTTTTTAGA
258 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGA
* * * * *
15805112 AGGATTTTTGCCCCCAAATTTGATAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
323 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
*
15805177 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
388 TCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
15805242 ACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
453 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTCCT
15805307 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
518 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
15805372 TGCACACACCCCTCCCCGGCCCCCCCGATCGTCGGAACCCCATTGCCATCGGTAAGGTTCTCCGG
583 TGCACACA--CCTCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCATCGGTAAGGTTCTCCGA
* * * * *
15805437 CGATGGTGTCCCGGTGAAGAAAAATGCGGCGCCAGCACATGCCCGAGCCCAACATGTGCTACCGC
646 CGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * * * *
15805502 AACCCTCGGTCCAGTTCAATCTTAGCCTGGGAATGAACTTCGTATGCTTAGACTAGGAATGAACT
711 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * *
15805567 CCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCTGCCGGCCAGAGGGGAGGGATG
776 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA--GG-CGGATG
* * *
15805632 CGCATGCCAGGGATCGATCGGGTCCCCTTTTACGTGCTACCGATCCTA
838 CGCAT--C---GA-CGATCGGGTCCCCCTCTGCGTGCTACCGATCCTA
** * * * *
15805680 CTGCCACAAACTTCGGTTCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
1 CTATCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * *
15805745 GATGAAACGAGCGGGCGGGCAGGCGGGCACTACACCGGCCAAAGAGGCGGGATGCACAAGCCATG
66 GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCC-GCCAGAGAGGCGGGATGCGCAAGCCGTG
*
15805810 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TTTCCAT-CTCAATGCCATTT
130 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGT--ATGC-CAATGCCATTT
* *
15805873 TTCTAGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
192 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
15805938 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAC
257 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAG
* * * *
15806003 AAGGACTTTTGGCCGCAAACTTGGTTGACGTGATCCTTCTATTTTTTTTGGCATGCACAAAAAAA
322 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
* * * *
15806068 TTCAACTAAAAACTCAAAGTGTACAAGATTTCGTGACCATTTGAAAAAAGTGTCACCATTTCAAA
387 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
15806133 CAATTTAATGGCTAC-GGCAGTAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGACTTC
452 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA-GTC
* *
15806197 C-CGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAATTACTAGCACCCATCGCACATCA
516 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * *
15806260 TGTGCGCAACCCCTCCCCGGCCCCCCCGATCGCCGGAACCCCATTGCCATCGGTAAGGTTCTCCG
581 TGTGCAC-ACACCTCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCATCGGTAAGGTTCTCCG
* ** * *
15806325 ACGATGGTGTCCCAGTAAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCTG
645 ACGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * *
15806390 CAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAAC
710 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* *
15806455 TCCGTATGCCTAAGTCAACCCATG-AACGAGCGTGCGGGCGCTCAACCGACCAGAGGGGCGGGAT
775 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA--GGC-GGAT
* * * *
15806519 GCGCAAGCCGGGGATCGATCTGTTCCCCCTCTGCGTGCTATCGATCCT-
837 GCGC-A-TC---GA-CGATCGGGTCCCCCTCTGCGTGCTACCGATCCTA
* * ** *
15806567 GTAGCTGCAACCCTCAATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT-AGACCAA
1 CTATC-GCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG-CCAA
* * * * * * * * * * *
15806631 CCGACGAAACGAGCGGACGAGTGAGTGGGCACTACGTCGGCCAGAAAGGCGGGAAAG-ACAGGAC
64 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG-CCGCCAGAGAGGCGGG-ATGCGCAAGCC
*
15806695 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
127 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG-TATGCCAATGCCATT
*
15806760 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCATTCATGTGAAGTTTCATGGCAAGACGA
191 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
15806825 CTCGTATTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTTGAGATTTTTTAAAATTGTTTCA
256 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCA
15806890 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
321 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
* * * * *
15806955 ATTTAGCTAAAAATTCGAAGTGTACAAGAGTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAG
386 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
15807020 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGTC
451 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTC
* *
15807085 CTCGAGGTTTGATGAGGGATAGGGGGCAAATATAAGTGCCAAGTACCAGCACCCATCGCACATCA
516 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
** * ** * *
15807150 TGTGCACACACC-CCCCGGCCCCCCACGATCATCGGAACCCTAATGCCGCCAGTCAGGTTCTCCG
581 TGTGCACACACCTCCCCGGCCCCCC-CGATCGCCGGAACCCCAATGCCATCGGTAAGGTTCTCCG
* * * *
15807214 GCGATGGTGTTCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCCG
645 ACGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * * *
15807279 TAACCCTCGGTCTGGTCCGGTCTTAAACTGAGAATGAACTCCGTATGGTTAGACTGGGAATGAAC
710 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
15807344 TCCGTATGCCTAAGTCAAACCACGAAACGAGTGTGCGGGCGCTCAGCC-AGCCAGA-GCTG-TG-
775 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGA-CCAGAGGCGGATGC
**
15807405 G-ATC-A-G-TCGGGTCCCCCTCTGCGTGCGGCCGATCCTA
839 GCATCGACGATCGGGTCCCCCTCTGCGTGCTACCGATCCTA
*
15807442 CTATCGCAACCCTTGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
1 CTATCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * *
15807507 GACGAAACGGGCGGGCGGGCGGGCGGGCACTATGCCGCCTAGAGAGACGGGATGTGGAAGCTGTG
66 GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGCC-AGAGAGGCGGGATGCGCAAGCCGTG
* * *
15807572 GATCGATAGGGTGGTAGGTTGGTTTAGGCTCATCGTCATATTTCTGTAGTGCCAATGCCATTTTT
130 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTA-TGCCAATGCCATTTTT
* *
15807637 TTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGACGACTC
194 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
** *
15807702 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG-TTCAGGATTTTTTAAAATTTTTTCAGA
259 GTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGA-GATTTTTTAAAATTTTTTCAGA
* * * * * *
15807766 TGGAGTGTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTATTGGCATTCTCAAAAAAAT
323 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
* *
15807831 TCAGCT-AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTTAGAC
388 TCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
15807895 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
453 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTCCT
*
15807960 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATA
518 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * * * *
15808025 TG--CGCACC-CCCCGGCCAACCCCGATCGCCGAAACCCCAATGCCGTCTGTCAGGTTCTCCGAT
583 TGCACACACCTCCCCGGCC-CCCCCGATCGCCGGAACCCCAATGCCATCGGTAAGGTTCTCCGAC
* * *
15808087 GATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGTA
647 GATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * *
15808152 ACCCTCGGTCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTG
712 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * *
15808217 CTTATGCTTAAGTCAACCCACGGAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG-GG-T-CG-A
777 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGCGGATGCGCA
* ** * * * *
15808278 -GGATCGGCCAGGTCCCTCTCTGCGTGCTGCCGATCCTG
842 TCGA-CGATCGGGTCCCCCTCTGCGTGCTACCGATCCTA
** * *
15808316 CTA-CTGCAACCCTCAATTCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
1 CTATC-GCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
15808380 CGACGAAATGGGCGGGCGAGCGGGCGGGCACTACGTCGGCCAAAGAGGCGGGATGCGTAAGCCGT
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG-CCGCCAGAGAGGCGGGATGCGCAAGCCGT
15808445 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTA
129 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTA
15808494 GTTTTTAAAA
Statistics
Matches: 2491, Mismatches: 284, Indels: 95
0.87 0.10 0.03
Matches are distributed among these distances:
871 214 0.09
872 5 0.00
873 191 0.08
874 540 0.22
875 10 0.00
877 1 0.00
881 1 0.00
882 1 0.00
884 1 0.00
885 2 0.00
886 1 0.00
887 6 0.00
888 489 0.20
889 429 0.17
890 118 0.05
891 117 0.05
892 365 0.15
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (879 bp):
CTATCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGCCAGAGAGGCGGGATGCGCAAGCCGTGG
ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTATGCCAATGCCATTTTTCT
GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
TTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGG
AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTCCTCGA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
ACACACCTCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCATCGGTAAGGTTCTCCGACGATG
GTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGCGGATGCGCATCGA
CGATCGGGTCCCCCTCTGCGTGCTACCGATCCTA
Found at i:15808200 original size:26 final size:26
Alignment explanation
Indices: 15808171--15808226 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
15808161 CCGGTCTGAT
*
15808171 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
15808197 CTTAGACTGGGAATGAACTGCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15808223 CTTA
1 CTTA
15808227 AGTCAACCCA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15808968 original size:26 final size:26
Alignment explanation
Indices: 15808919--15808971 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15808909 CGGGTCCGAT
***
15808919 CTTAGACTGGGAATGAATTTCGTATG
1 CTTAGACTGGGAATGAACAACGTATG
15808945 CTTAGACTGGGAATGAACAACGTATG
1 CTTAGACTGGGAATGAACAACGTATG
15808971 C
1 C
15808972 CTAAGTCAAA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.15, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACAACGTATG
Found at i:15809841 original size:26 final size:26
Alignment explanation
Indices: 15809812--15809864 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15809802 CTGGTCCGAT
* *
15809812 CTTAGATTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15809838 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15809864 C
1 C
15809865 CTAAGTCAAT
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15811642 original size:26 final size:26
Alignment explanation
Indices: 15811606--15811658 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15811596 CTGATCTGAT
*
15811606 CTTAGACTGGGAATGAAGTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15811632 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15811658 C
1 C
15811659 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15812520 original size:26 final size:26
Alignment explanation
Indices: 15812491--15812543 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15812481 CTGGTCCGAT
15812491 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15812517 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15812543 C
1 C
15812544 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15813252 original size:885 final size:889
Alignment explanation
Indices: 15808495--15817416 Score: 11900
Period size: 886 Copynumber: 10.1 Consensus size: 889
15808485 ATTTCTGTAG
* * *
15808495 TTTTTAAAATTTTTTCAGGAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * * *
15808560 TTGGCATGCTCAAAAAAATTCAGCTAAAAACTCAAAGTGTAGAAGATTTTGTAACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
*
15808625 AAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
*
15808690 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAA-TACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * * * **
15808754 GCACCCATCGCACATCATGTGTGAACACCCCCC-GGCCCTCCGATCGTCGGAACCCCTATGCCAC
261 GCACCCATCGCACATCATGTGCGCACACCCCCCTGCCCCCCCGATCGTCGGAACCCCAATGCCGT
* * * * * *
15808818 CGGTCAGGTTCTCCGATGATGGTGTCCCAACGAAGAAGAATACGGCAGCAGCACATGCCCCAGCC
326 CGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * *
15808883 CAACATGTGCTGCCGCAACCCTCGGTCGGGTCCGATCTTAGACTGGGAATGAATTTCGTATGCTT
391 CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
** * * * * * *
15808948 AGACTGGGAATGAACAACGTATGCCTAAGTCAAACCACGAAATGAGAGTACGGACGCTCAACCGG
456 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * *
15809013 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGATCCCTCTCTGCGTGGTACCGATCCTAC
521 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCC-CTCTGCGTGCTACCGATCCTGC
* * *
15809078 TATCGTAACCCTCGGTCC-GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAGCCAACC
585 TACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
15809142 GACGAATCAA-GCAGGCAGGCGGGCGGACGGGCACTACACCGACCAGAGAGGCGGGAT-CGCAAG
650 GAC-AA--AACG-A-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* * * * * * *
15809205 CCGTAGATCGATAGGATGGTGGGTTGGTTTAGGCACATCTTCATACTTCTACCATGCCAATGCCA
710 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCA
* * *
15809270 TTTTTCTGGCTTGTAAATTCATACAACGATCCCTTAAGCCTTCATGTGAAGTTTCATGGCTAGAC
775 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * *
15809335 GACTCGTTTTTTATTTGTCACGATTTTTGAAACTTTTTACGGTTCGAGAT
840 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * *
15809385 TTTTTTAAATTTTTTCAGAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTT
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * *
15809450 TTGGCATGCACAAAAAAATTCAGCGAAAAGCTCGAAGTGTACAAGATTTTGTGACCGTTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * * * *
15809515 AGGTGTCCCCATTTCAGACACTTTAATGGCTAGTAGCAGCAAACCTGTAAAATCTTAAACGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
15809580 TGAAGGGGGTGTGAGTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * *
15809645 GCACCCATCGCACATAATGTGCGTACACCACCCTAGCCCCCCCGATCGCCGGAACCCCAATGCCG
261 GCACCCATCGCACATCATGTGCGCACACCCCCCT-GCCCCCCCGATCGTCGGAACCCCAATGCCG
* * * *
15809710 TCGGTTAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCAGAACCAGCACATGCCCGAGT
325 TCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * *
15809775 CCAGTATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGATTGGTAATGAACTCCGTATGCT
390 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * *
15809840 TAGACTGGGAATGAACTCTGTATGCCTAAGTCAATCCACGAAACGAGCGTACAGGCGCTCAGTCG
455 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * * * * * * *
15809905 GCCAGATGGGCAGGATGTGCAAGCTGGGGATCGGTCGGGTTCCTCTCTGTGTGCTATCGATCCTG
520 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGG-TCCCCTCTGCGTGCTACCGATCCTG
* ** * * *
15809970 CTACCATAACCCTCGGTCTAG-TCTAATCTTAGAATGGGAATGAACTCCGTATGCTTAAGCCAAC
584 CTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * *
15810034 CGACGAATCGAGCGGGTGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAAAGAGGCGGGATGCG
649 CGAC-AA---AAC----GAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCG
* *
15810099 TAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
706 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAAT
15810164 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
771 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * *
15810229 AGACGA-TCCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACAGTTTGGGAT
836 AGACGACT-CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * *
15810283 TTTTTAAAATTTTCTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTT
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
*
15810348 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACGAGATTTTGTGACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
**
15810413 AAGTGTCCCCATTTCAGACACTTTAATGGCCGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
15810478 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGAGCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * *
15810543 GCACCCATCGCACATCATGTGCGCACACCCCCCAGACCCCTCTCCGATCGCCAGAACCCCAATGC
261 GCACCCATCGCACATCATGTGCGCACACCCCCCTG-CCCC-C-CCGATCGTCGGAACCCCAATGC
* ** * * * * *
15810608 CGTCGGTCAGGTTCTCAGGTGATGGTGCCCCGAAGAAGAAAAAAGCGGCACCAGCACAAGCCCCA
323 CGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * *
15810673 ACCCAGCATTTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGAGAATGAACTCCGTATG
388 GCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*** * * * *
15810738 CTTAGACTGGGAATGAAAAACATATGCCTAAGTCAACCCACGAAACGAGAGTGCGGACGCTCAAC
453 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
15810803 CGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCTCTCTGCATGGTACCGATCC
518 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCC-CTCTGCGTGCTACCGATCC
* * * * **
15810868 TGCTATCGTAACCCTCGGT-CTGATCTGATCTTAGACTGGGAATGAACTCCATATGCGAAAGCCA
582 TGCTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * *
15810932 ACCGACGAATCAAAC-AGATAGGCGGGCGGGCGGGCACTACTCCGGCCAGAGAGGCGGGATACGC
647 ACCGAC--A--AAACGAG-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGC
* * * *
15810996 AAGGCGTAGATCGATAGGATGGTGGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATG
707 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATG
15811061 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
772 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
*
15811126 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGAT
837 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* *
15811179 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGATAGACGTGATCCTTGTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
*
15811244 TTGGCATGCACAAAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* *
15811309 AAGTGTCCACATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* * * * *
15811374 TTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAACGGCCAAGTGCAA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * * * *
15811439 GCACCCATCGCACATCATGTGCACACACCCCCCCGGCCCCCCCGATCGTCGAAACCCCATTGTCA
261 GCACCCATCGCACATCATGTGCGCACA-CCCCCCTGCCCCCCCGATCGTCGGAACCCCAATGCCG
** * * *
15811504 TCGGTCAATTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATTCCCGAGC
325 TCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * *
15811569 CCAGCATGTGCTACCACAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAAGTCCGTATGCT
390 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* *
15811634 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGTGCGGGCGCTCAGCCG
455 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * ** * * * * *
15811699 ACGAGAGGGGCAAGATGCGCAAGCCGAGGATCGACCGGATCCCCTTCTACGTGCTGCCGATCCTG
520 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC-TCTGCGTGCTACCGATCCTG
* * * *
15811764 CTACCATAACCCTCGATCCGG-TCCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAAC
584 CTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * **
15811828 TGAC-GAA--A-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCCAGATGCGCAAGCCGT
649 CGACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* * *
15811889 GGATCGATAGGTTGGTAGGTGGGATTAGGCACATCTTCATATTTTTGCCGTGCCAATGCCATTTT
714 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTT
* * ** *
15811954 TTTGGCTTGTAGATTCATACAATGGTTTCTTAAGCCTTCATGTGAAGTTTCACGGCAAGACGACT
779 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* *
15812019 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTGAAGGTTCGGGAT
844 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* *
15812065 TTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * * *
15812130 TTGGCATGCATAAAACAATTCAGCAAAAAACTCGAAGTGTACAAGATTTCGTGACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * * *
15812195 GAGTGTCCCCATTTTAGAGACTTTAATGGCTACTGGCAGCAAACCTGTAAACTCTCAAATGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
15812260 TTAAGGCGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGACAATATAAGGGCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * *
15812325 GCACCCATCGTACATCATGTGCGTACACCCCCCGGTCCCCCCC-ATCGTCGGAACCCCAATGTCG
261 GCACCCATCGCACATCATGTGCGCACACCCCCCTG-CCCCCCCGATCGTCGGAACCCCAATGCCG
* * ** * * * ** * *
15812389 CCAGTCAGGTTCTCCGGTGATGGTGTCTCGATGAAGAAAAAAGTTGCCCCAGCACATGCCTGAGC
325 TCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * *
15812454 CTAGCATGTGCTGCTGCAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCT
390 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * *
15812519 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGAT-TGGGCTCCCAGCC
455 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG-TGCGGGCGCTCAGCC
* ** * * *
15812583 GGCCAAAGGGGCGGGATGCGCAAGCCGGTTATCGGTCGGGTCCCCGTCTACGTGCTGCCGATCCT
519 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC-TCTGCGTGCTACCGATCCT
* ** * * *
15812648 ACTACCGTAACCCTCAATCCGGTTC-AATCTTAGACTGGGAATGAACTCTGTATGCCTTAGCCAA
583 GCTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * ** *
15812712 CCGACAAAACGAGCGGGCGGATGAGCGGGCACTACGCCTGCTGGAGAGGCGGGATGCGTAAGCCG
648 CCGACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
15812777 TGGATCGATAGGGTGGTAGGT-GGTTTAGGCACATCTTCATATTTTTGCCATGGCAATGCCATTT
713 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTT
* *
15812841 TTCTGGCTTGTAAATTCATACAACGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
778 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
15812906 TCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGGGAT
843 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * * * * *
15812953 TTTTCAACATTTTTTCAGAAGGCGTTTTGGCCCCAAA-TTGGCAGATGTGATCCTTCTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
*
15813017 TTGGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * * *
15813082 AAGTATCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCGCAAATACTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
15813147 TTAAGGAGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * * *
15813212 GCACCCATCGCACATCATGTGCGTACA-CCCCCTACCCCCCCGATCGTCGGAGCCCTAATGCTGT
261 GCACCCATCGCACATCATGTGCGCACACCCCCCTGCCCCCCCGATCGTCGGAACCCCAATGCCGT
* * * * *
15813276 CGGTCAGGTTTTTCGACGATGGTGTCCC-AGTGAAGAAAAATGCGGCACCAGCAAATGCTCGAGC
326 CGGTCAGGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * ** ***
15813340 CCAGCATGTGCTGCCGTAACCCTCGATCCAGTTTTATCTTAGACTGGGAATGAACTCCGTATGCT
390 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * ** *
15813405 TAGACTGGG-ATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAATCA
455 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * *
15813469 GCCAGAAGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCATCTACGTGCTACCGATCCTA
520 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC-TCTGCGTGCTACCGATCCTG
* ** * *
15813534 CTGCCACAACCCTCAGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTTAGCCAAC
584 CTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * **
15813598 CGACAAAATGAACGGGCGGGTGGGCGGGCACTACGCCTGCCAGAGAGGCGGGATGTACAAGCCGT
649 CGACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* * *
15813663 GGATCGATAGGGTGGTAGGT-GGTTTAGGCACATCTTCATCTTTCTGCCATGGCAATGCCATTTT
714 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTT
* *
15813727 TCTAGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
779 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * *
15813792 CGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGAT
844 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * * *
15813838 TTTTTAACATTTTTTCAGAAGGCGTTTTGGCCCCAAA-TTGGCAGACGTGATCCTTCTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
15813902 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
*
15813967 AAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
*
15814032 TTAAGGGGATGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
15814097 GCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCGCCCCGATCGTCGGAACCCCAATGCC
261 GCACCCATCGCACATCATGTGCGCACACCCCCCT-GCCC-CCCCGATCGTCGGAACCCCAATGCC
* * * *
15814162 GTCGGTTAGGTTCTCCGACGATGGGGTCCC-AGCGAAGAAAAATACAGCACCAGCACATGCCCGA
324 GTCGGTCAGGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * * * *** * * *
15814226 GCCTAGCATGTGCTGCCGTAATCTTCGATCCATTCTGATCTTATACTGGGAATGAACTTCGTATG
388 GCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
15814291 CTTAGACTGGGAATGAACTCCGTATG-C----T-------C---A--A--------GCG---A--
453 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
15814326 ---CCAGAGGGGCGGGATGCGCAAGCCAGGGATCGATCGGGTCCCCCTCTGCATTCTACCGATCC
518 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCC
* * * * *
15814388 TGCTACCGCAACCCTCTGTCCGG-TCCGGTCTTAGACAGGGAAT-AAGCTCCGTATGCCTAAGCC
582 TGCTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAA-CTCCGTATGCCTAAGCC
** * * *
15814451 AACCGATGAAACGAGCGGGCGGGCGGG-GGGCACTACGCTGGCCAGAAAGGCGGGATACGCAAGC
646 AACCGACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
15814515 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCAT
711 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCAT
* *
15814580 TTTTCTGGCTTGTAAATTCATACAATAGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATG
776 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* *
15814645 AGTCGTCTTT-TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGAT
841 ACTCGT-TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * *
15814694 TTTTTAGAACTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
*
15814759 TTGGCATGCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * *
15814823 AAGTATCCCCATTTCAGACACTTTAATGGTTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* *
15814888 TTAAGTGGGTGTGCA-TTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACC
196 TTAAGGGGGTGTG-AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
15814952 AGCACCCATCACACATCATGTGTGCACACCCCCTTCGGCCCCCCCGATCGCCGGAACCCCAATGC
260 AGCACCCATCGCACATCATGTGCGCACACCCCC--CTGCCCCCCCGATCGTCGGAACCCCAATGC
* * *
15815017 CGACGGTCAAGTTTTCCGACGATGGTGTCCCGACGAAGAAAAAT-CTGGCACCAGCACATGCCTC
323 CGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGC-GGCACCAGCACATGCC-C
* * * *
15815081 -AGCCCAGCACGTGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGATTGGGAATGAACTCCGTA
386 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
15815145 TGCTTAGATTGAGAATGAACTCCGTATGCCTAAGAT-AACTCATGAAACGAGCGTGCGGGCGCTT
451 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAG-TCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * *
15815209 AGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCGACCGAGTCCACCTCTGCGTGCTATCGA
515 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCC-CCTCTGCGTGCTACCGA
* * * * * * * *
15815274 TCCTGCTGCCGTAACCTTCGGTCTGG-TCTGATATTAAACTGGGAATGAACTCTGTATGCCCAAA
579 TCCTGCTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
** *
15815338 CCAACCGATGAAACGA----GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGAGCAA
644 CCAACCGACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* * * *
15815399 GCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCTTGCCAATGCC
709 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCC
* *
15815464 ATTTTTCTTGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
774 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15815529 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACTGTTCGGGAT
839 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * * *
15815580 TTTTTAAAACTTTTTCAGAAGGCGTTTTGGCCCCAAACTTGGTAGACATGATCCATGTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* *
15815645 TTGGCATGCAAAAAAAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
15815710 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* * *
15815775 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGATAGGGGACCAATATATGGCCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * *
15815839 GCACCCATCGCACATCATGTGCGCACA-CCCCCTGGCCCCCCCGATCGCCGGAACCCAAATGCCA
261 GCACCCATCGCACATCATGTGCGCACACCCCCCT-GCCCCCCCGATCGTCGGAACCCCAATGCCG
* ** *
15815903 CCGGTCAGGTTCTCCGGTGATGGTGTCCCCACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
325 TCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
*
15815968 CCAGCATGTGCTGTCGCAA-CC-C--T-T-G---G-TC-----C--GG--T---CT--G-AT-CT
390 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * **
15816007 TAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCAGGAAACGAGCGTACGGGCGGTCAATCG
455 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* ** *
15816072 GCCAGAGGGGCGGGATGTGCAAGCCAAGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTG
520 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCCTG
* * ** * * * * * *
15816137 CTATCGCAACCCTCAATCCAG-TCTAATCTTAGACTAGGAATGAACTCCATATGCCTAAACCAAT
584 CTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * *
15816201 TGACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGATGCGGGATGCGCAAGCTGT
649 CGACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* * * * *
15816266 GGATCGATAGGGTAGTAGGTTGGTTTAGGTACATCTTCATATTTTTTCCATTCCAATGCCATTTT
714 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTT
* *
15816331 TTTGGCTTGTAAATTCATACAATGTTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
779 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* *
15816396 CGTTTTCTATTTTTAACGATTTTTGAAACTTTTTACGGTTCGGCAT
844 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * * * * *
15816442 TTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGTTAGATGTGATCTTTGTATTTTTA
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* *
15816507 TTGGCATGTACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAA
66 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * *
15816572 AAGTGTCCCCATTTCCGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATACTCT
131 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
**
15816637 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAACAGCCAAGTACCA
196 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * *
15816702 GCACCCATCGCACATTATGTGCGCACACCCCCCGGCCCCCCTCGATCATCGGAACCCCAACGCCG
261 GCACCCATCGCACATCATGTGCGCACACCCCCCTGCCCCCC-CGATCGTCGGAACCCCAATGCCG
* * * * *
15816767 TCGATTAGGTTCTCC-AGCGACGGTGTCCCGAAGAAGAAAAATGCGGCACCAGCACATGCCCGAA
325 TCGGTCAGGTTCTCCGA-CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * ** *
15816831 TCCAGCATGTGCTGCCGCAACCCTTGGTCCAGTCCGATCTTAGACTAGGAACT-AACTCCGTATG
389 CCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAA-TGAACTCCGTATG
* * *
15816895 CTTAGATTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
453 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
15816960 CGGCCAGAGGGGCGAGATGCACAAGTCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCAATCC
518 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCC
* * * **
15817025 TGTTGCCGTAACCCTCGGTCCAG-TCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
582 TGCTACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
15817089 ACAGACGAAATGAGCAGGCGGGCGGGCGGGCACTATAG-CAGCCAGAGAGGCGGGATGTGCTAGC
647 ACCGACAAAACGAGCGGGCGGGCGGGCGGGCACTA-CGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
15817153 CATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTTTGCCATGCCAATGCCAT
711 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCAT
* *
15817218 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCATGTGAAGTTCCATGGCAAGACG
776 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
** **
15817283 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATTGTTCAAGAT
841 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
* * *
15817332 TTTTTAAAATTTTTACTGAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTG
1 TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
15817397 TTGGCATGCACAAAAAAATT
66 TTGGCATGCACAAAAAAATT
15817417 TGGCCGTGGA
Statistics
Matches: 7089, Mismatches: 812, Indels: 262
0.87 0.10 0.03
Matches are distributed among these distances:
855 59 0.01
856 604 0.09
857 101 0.01
858 168 0.02
859 4 0.00
860 1 0.00
861 1 0.00
862 420 0.06
863 60 0.01
864 97 0.01
865 3 0.00
867 2 0.00
868 1 0.00
870 1 0.00
871 1 0.00
872 1 0.00
873 2 0.00
874 5 0.00
875 1 0.00
878 1 0.00
879 1 0.00
880 1 0.00
881 5 0.00
882 1 0.00
883 4 0.00
884 104 0.01
885 989 0.14
886 996 0.14
887 325 0.05
888 324 0.05
889 194 0.03
890 692 0.10
891 35 0.00
893 305 0.04
894 298 0.04
895 4 0.00
896 483 0.07
897 47 0.01
898 445 0.06
899 6 0.00
900 295 0.04
901 1 0.00
903 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (889 bp):
TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
GCACCCATCGCACATCATGTGCGCACACCCCCCTGCCCCCCCGATCGTCGGAACCCCAATGCCGT
CGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTCTGCGTGCTACCGATCCTGCT
ACCGTAACCCTCGGTCCGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
ACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTC
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGAT
Found at i:15813423 original size:25 final size:26
Alignment explanation
Indices: 15813377--15813428 Score: 97
Period size: 25 Copynumber: 2.0 Consensus size: 26
15813367 CCAGTTTTAT
15813377 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15813403 CTTAGACTGGG-ATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15813428 C
1 C
15813429 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 15 0.58
26 11 0.42
ACGTcount: A:0.25, C:0.21, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15814301 original size:26 final size:26
Alignment explanation
Indices: 15814265--15814318 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
15814255 CCATTCTGAT
* *
15814265 CTTATACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15814291 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15814317 CT
1 CT
15814319 CAAGCGACCA
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15815150 original size:26 final size:26
Alignment explanation
Indices: 15815121--15815173 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15815111 CCGGTTCGAT
*
15815121 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGAGAATGAACTCCGTATG
15815147 CTTAGATTGAGAATGAACTCCGTATG
1 CTTAGATTGAGAATGAACTCCGTATG
15815173 C
1 C
15815174 CTAAGATAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGATTGAGAATGAACTCCGTATG
Found at i:15816907 original size:26 final size:26
Alignment explanation
Indices: 15816869--15816921 Score: 63
Period size: 26 Copynumber: 2.0 Consensus size: 26
15816859 CCAGTCCGAT
15816869 CTTAGACTAGGAACT-AACTCCGTATG
1 CTTAGACTAGGAA-TGAACTCCGTATG
* * *
15816895 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15816921 C
1 C
15816922 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
25 1 0.04
26 22 0.96
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15817327 original size:26 final size:26
Alignment explanation
Indices: 15817288--15817346 Score: 73
Period size: 26 Copynumber: 2.2 Consensus size: 26
15817278 AGACGACTCG
* * *
15817288 TTTTCTATTTTTCACGATTTTTGAAAC
1 TTTT-TATTGTTCAAGATTTTTGAAAA
*
15817315 TTTTTATTGTTCAAGATTTTTTAAAA
1 TTTTTATTGTTCAAGATTTTTGAAAA
15817341 TTTTTA
1 TTTTTA
15817347 CTGAAGGAGT
Statistics
Matches: 28, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
26 24 0.86
27 4 0.14
ACGTcount: A:0.25, C:0.08, G:0.07, T:0.59
Consensus pattern (26 bp):
TTTTTATTGTTCAAGATTTTTGAAAA
Found at i:15817632 original size:268 final size:268
Alignment explanation
Indices: 15817155--15817684 Score: 853
Period size: 268 Copynumber: 2.0 Consensus size: 268
15817145 GTGCTAGCCA
* * * * *
15817155 TGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTTTGCCATGCCAATGCCATTT
1 TGGATCGATAAGGTGGTAGGTGGATTTACGCACATCCTCATATTTCTACCAGGCCAATGCCATTT
* * *
15817220 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCATGTGAAGTTCCATGGCAAGACGAC
66 TTCAGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGCAAGACGAC
* * *
15817285 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATTGTTCAAGATTTTTTAAAATTTTTACTG
131 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCAAGATTTTTTAAAATTTTTACAG
15817350 AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
196 AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
15817415 TTTGGCCG
261 TTTGGCCG
* * * * *
15817423 TGGATCGATAGGGTGGTAGGTGGATTTACGTACATCTTCATATTTCTATCGGGCCAATGCCATTT
1 TGGATCGATAAGGTGGTAGGTGGATTTACGCACATCCTCATATTTCTACCAGGCCAATGCCATTT
*
15817488 TTCAGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
66 TTCAGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGCAAGACGAC
* * * *
15817553 TTGTTTTCTATTTTTCATGATTTTTAAAACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTCAG
131 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCAAGATTTTTTAAAATTTTTACAG
* *
15817618 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAA
196 AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
15817683 TT
261 TT
15817685 CAGCTAAAAA
Statistics
Matches: 239, Mismatches: 23, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
268 239 1.00
ACGTcount: A:0.25, C:0.17, G:0.20, T:0.39
Consensus pattern (268 bp):
TGGATCGATAAGGTGGTAGGTGGATTTACGCACATCCTCATATTTCTACCAGGCCAATGCCATTT
TTCAGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCAAGATTTTTTAAAATTTTTACAG
AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTTGGCCG
Found at i:15818056 original size:26 final size:26
Alignment explanation
Indices: 15818027--15818076 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
15818017 CCGGTCCGAT
15818027 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
15818053 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
15818077 TGCCTAAGAT
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.22, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:15819804 original size:26 final size:26
Alignment explanation
Indices: 15819775--15819827 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
15819765 CCAATCCGAT
15819775 CTTAGACTAGGAACT-AACTCCGTATG
1 CTTAGACTAGGAA-TGAACTCCGTATG
* *
15819801 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15819827 C
1 C
15819828 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Done.