Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168159.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_4, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33012953
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Warning! 65000 characters in sequence are not A, C, G, or T
File 81 of 160
Found at i:15819838 original size:862 final size:863
Alignment explanation
Indices: 15817419--15820322 Score: 3749
Period size: 862 Copynumber: 3.3 Consensus size: 863
15817409 AAAAAATTTG
* * * * **
15817419 GCCGTGGATCGATAGGGTGGTAGGTGGATTTACGTACATCTTCATATTTCTAT-CGGGCCAATGC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TTTCCATGCCAATGC
* *
15817483 CATTTTTCAGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
65 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* * * *
15817548 ACGACTTGTTTTCTATTTTTCATGATTTTTAAAACTTTTTATGGTTCGAGATTTTTTAAAATTTT
130 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAAATTTT
15817613 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
194 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
15817678 AACAATTCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
259 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * * *
15817743 TCAGAAACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTAACGGGGTATG
324 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
15817808 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCGCAC
389 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * * * * *
15817873 ATTATTTACGCACACCCCCCCCGACCCCCCAATCGTCGGAGCCCCAATGCTGCCGGTTAAGTTCT
454 ATTATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTTAGGTTCT
* *
15817938 -TCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGTACATACCCGAGCCCAGCATGTGCT
518 CTCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
15818002 GCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTACGCTTAGACTGGGAAT
583 GCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
15818067 GAACTCCGTATGCCTAAGATAACCCATCAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAGGGGCG
648 GAACTCCGTATGCCTAAG-T-----A-C--A--A----------G---AGCCGGCCAGAGGGGCG
* * * * * *
15818132 GGATGTGCAAGCCGGGGATCGATCGAGTCCTCCTCTGCATGCTGTCAATCCTGCTGTCGCAACCT
689 GGATGTGCAAACCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTGTCGCAACCC
** * * *
15818197 TCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAACCAACCGATGAAACGA--
754 TCGGTCCAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAA-CGACGAAACGAGC
15818260 --GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGAGCAA
818 GGGCGGGCGGGCGGGCACTACGCC-GCCAGAGAGGCGGGATGAGCAA
* * * * *
15818305 GTCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCTTGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCATGCCAATGCC
* *
15818370 ATTTTTCTTGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * *
15818435 CGGCTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACTGTTCGGGATTTTTTAAAATTTTT
131 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTT
* * * *
15818500 TCAGAAGGCA-TTTTGGCCCCAAACTTGGTAGACATGATCCATGTATTTTTTTTGGCATGCAAAA
195 TCAGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
15818564 AAAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
259 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
15818629 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
324 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
15818694 AGTTCTCGAGGTTTGATGA-GGATAGGGGACCAATATATGGGCCAAGTACCAGCACCCATCGCAC
389 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
15818758 ATCATGTGCGCACACCCCCTGGCCCCCCCGATCGCCGGAACCCAAATGCCACCGGTCAGGTTCTC
454 ATTATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTTAGGTTCTC
*
15818823 -CGATGATGGTGTCCCCG-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
519 TCGACGATGGTGT-CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * * * * *****
15818886 GTCGCAACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCA
583 GCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG-CTTAGACTGGGAA
* ** * * *
15818951 GGAAACGAGCGTACGGGC--GGT-C-A-A-CCGGCCAGAGGGGCGGGATGTGCAAACCGGGGATC
647 TG-AAC-TCCGTA-TGCCTAAGTACAAGAGCCGGCCAGAGGGGCGGGATGTGCAAACCGGGGATC
* * * **
15819010 GGTCGGGTCCCCCTCTGCGTGCTACCAATCCTGCTATCGCAACCCTCAATCCAGTCTAATCTTAG
709 GATCGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTGTCGCAACCCTCGGTCCAGTCTAATCTTAG
* * *
15819075 ACTAGGAATGAACTCCATATGCCTAAACCAATCGACAAAACGAGCGGGCGGGCGGGCGGGCACTA
774 ACTGGGAATGAACTCCGTATGCCTAAACCAA-CGACGAAACGAGCGGGCGGGCGGGCGGGCACTA
* *
15819140 CGCCGACCAGAGATGCGGGATGCGCAA
838 CGCCG-CCAGAGAGGCGGGATGAGCAA
* * * *
15819167 GCCGTGGATCGATAGGGTAGTAGGTTGGTTTAGGTACATCTTCATATTTTTTCCATTCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCATGCCAATGCC
* * *
15819232 ATTTTTTTGGCTTGTAAATTTATACAATGTTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
15819297 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGCATTTTTTAAAATTTTT
131 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG-ATTTTTTAAAATTTTT
* * *
15819362 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTATTGGCATGTACAAA
195 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15819427 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
15819492 CCGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
325 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
**
15819557 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAACAGCCAAGTACCAGCACCCATCGCACA
390 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
15819622 TTATGTGCGCACACCCCCCGGCCCCCCTCGATCACCGGAACCCCAACGCCGTCGATTAGGTTCTC
455 TTATGTGCGCACACCCCCCGGCCCCCC-CGATCGCCGGAACCCCAATGCCGCCGGTTAGGTTCTC
* * * * * **
15819687 TAG-CGACGGTGTCCCGAAGAAGAAAAATGCGGCCCCAGCACACGCCCGAATCCAGCATGTGCTG
519 TCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* ** *
15819751 CCGCAACCCTCGATCCAATCCGATCTTAGACTAGGAACT-AACTCCGTATGCTTAGACTGGGAAT
584 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAA-TGAACTCCGTATGCTTAGACTGGGAAT
* * *
15819815 GAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCG
648 GAACTCCGTATGCCTAAGT------AC--AA-GAGC---C--G-GC-CAG-AGG---G-GCGG-G
* * *
15819880 A-GATGCACAACTCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCAATCCTGCTGCCGTAACC
691 ATG-TGCA-AAC-CGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTGTCGCAACC
* *
15819944 CTCGGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAG
753 CTCGGTCCAGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAAC-GACGAAACGAG
* * * *
15820009 CGGGCGGGCGAGCGGGCACTACAGCAGCCAGAGAGGCGGGATGTGCTA
817 CGGGCGGGCGGGCGGGCACTAC-GCCGCCAGAGAGGCGGGATGAGCAA
* * *
15820057 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTTTGCCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCATGCCAATGCC
* *
15820122 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCATGTGAAGTTCCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15820187 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCAAGATTTTTTAAAATTTTT
131 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTT
* *
15820252 ACAGAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAA
195 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
15820317 AAAATT
260 AAAATT
15820323 TGGCCGTGGA
Statistics
Matches: 1763, Mismatches: 200, Indels: 106
0.85 0.10 0.05
Matches are distributed among these distances:
858 123 0.07
859 1 0.00
860 2 0.00
861 8 0.00
862 422 0.24
863 78 0.04
864 119 0.07
865 2 0.00
869 1 0.00
872 1 0.00
873 1 0.00
874 1 0.00
875 1 0.00
878 2 0.00
880 1 0.00
881 2 0.00
882 3 0.00
883 2 0.00
884 139 0.08
885 65 0.04
886 377 0.21
887 10 0.01
888 8 0.00
889 4 0.00
890 386 0.22
891 4 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.27
Consensus pattern (863 bp):
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCATGCCAATGCC
ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGATTTTTTAAAATTTTTT
CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
TATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTTAGGTTCTCTC
GACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
CTCCGTATGCCTAAGTACAAGAGCCGGCCAGAGGGGCGGGATGTGCAAACCGGGGATCGATCGGG
TCCCCCTCTGCGTGCTGCCAATCCTGCTGTCGCAACCCTCGGTCCAGTCTAATCTTAGACTGGGA
ATGAACTCCGTATGCCTAAACCAACGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGCCA
GAGAGGCGGGATGAGCAA
Found at i:15820538 original size:268 final size:268
Alignment explanation
Indices: 15820061--15820590 Score: 889
Period size: 268 Copynumber: 2.0 Consensus size: 268
15820051 GTGCTAGCCA
* * * * *
15820061 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTTTGCCATGCCAATGCCATTT
1 TGGATCGATAGGGTGGTAGGTGGATTTACGCACATCCTCATATTTCTACCAGGCCAATGCCATTT
* *
15820126 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCATGTGAAGTTCCATGGCAAGACGAC
66 TTCAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGCAAGACGAC
* *
15820191 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCAAGATTTTTTAAAATTTTTACAG
131 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTACAG
15820256 AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
196 AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
15820321 TTTGGCCG
261 TTTGGCCG
* * * *
15820329 TGGATCGATAGGGTGGTAGGTGGATTTACGTACATCTTCATATTTCTATCGGGCCAATGCCATTT
1 TGGATCGATAGGGTGGTAGGTGGATTTACGCACATCCTCATATTTCTACCAGGCCAATGCCATTT
*
15820394 TTCAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
66 TTCAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGCAAGACGAC
* * * *
15820459 TTGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
131 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTACAG
*
15820524 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
196 AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
15820589 TT
261 TT
15820591 CAGCTAAAAA
Statistics
Matches: 243, Mismatches: 19, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
268 243 1.00
ACGTcount: A:0.25, C:0.16, G:0.20, T:0.38
Consensus pattern (268 bp):
TGGATCGATAGGGTGGTAGGTGGATTTACGCACATCCTCATATTTCTACCAGGCCAATGCCATTT
TTCAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTACAG
AAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTTGGCCG
Found at i:15820962 original size:26 final size:26
Alignment explanation
Indices: 15820933--15820985 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15820923 CCGGTCCGAT
15820933 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15820959 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15820985 C
1 C
15820986 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15822193 original size:892 final size:890
Alignment explanation
Indices: 15820325--15830975 Score: 12720
Period size: 892 Copynumber: 12.1 Consensus size: 890
15820315 AAAAAATTTG
* * * * **
15820325 GCCGTGGATCGATAGGGTGGTAGGTGGATTTACGTACATCTTCATATTTCTATCGGGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
15820390 ATTTTTCAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15820455 CGACTTGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
15820520 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15820585 AAAATTCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
261 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * * *
15820650 CAGAAACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTAACGGGGTATGA
326 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
15820715 GTTCTCGAGGTTTGATCAGGGATAGGGGGCCAATGTAAGGGTCAAGTACCAGCACCCATCGCACA
391 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * * * * *
15820780 TTATTTACGCACACCCCCCCGACCCCTCC-AATCGTCGGAGCCCCAATGCTGCCGGTGAAGTTCT
456 TCATGTGCGCACACCCCCCCGACCCC-CCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * * *
15820844 TCGACGATGGTGTCCCGACGAAGAAAAATACGACACCAGTACATACCCGAGCCCAGCATGTGCTA
520 CCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
15820909 CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
585 CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * *
15820974 AACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTACGGGCGCTCAGTCGGCCAAAGAGGCGG
650 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * * * ***
15821039 GATGCGCAAGCCAGGGATCGACCGGGTCCCCCTCTGCGGGCTGTCGATCTTGCTACCGTAACCCT
715 GATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAACCCT
* * * * * * *
15821104 CGATCCGATCTGATGTTAGACTGGGAATTAACTCTGTATGCCTAAGCCAACCGACGAATCGAACG
780 CGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG
* *
15821169 GGCGGGCGGGCGGGCACTACGTCGGCCAGAAAGGCGGGATGCACAA
845 GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * * * *
15821215 GCCATGAATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * * *
15821280 ATTTTTCTGGCTTGTAAATTCATAAAATGGTCGCTTAAGCCTTCATGTGAAGTTTCTTGGTAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * ** * *
15821345 TGACTCGTTTTCTATTTTTCACGATTTTCCAAACTTTTTAAGGTTCGGGAGTTTTTAAAATTTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
15821410 TCAGGAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15821475 AAAATTCAGCGAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
261 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
15821540 CAGACACTTTAGTAGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTATGA
326 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
15821605 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
391 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
*
15821670 TCATGTGCGCACACCCGCCCCCGACCCCCCTGATCGTCGGAACCCCAAAGCCGTCGGTCAGGTTC
456 TCATGTGCGCACA-CC-CCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
* * *
15821735 AT-CGGTGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCAAATGCCCAAGCCCAGCATGTGC
519 -TCCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * ** * * * * **
15821799 TGTCGCAACCCTCGGTCTGATTTGATCTTAGACTGGGAATTAACTCTGTATGCTAAGATTCAGAA
583 TGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * * *
15821864 TGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCATATGGGC
648 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGC
* * * ** * * *
15821929 GGGATGCACAAGCTGGGGATCGAGCCGGTCCCCCTCTGCGTGCTATCTATCCTACTACTACAGCC
713 GGGATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAACC
* ** *
15821994 CTCAGTCCAATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
778 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * ** *
15822059 CGGGCGGGCGGGTGGGCACTATGCCGCCCAGAGAGGCTTGACGCGCAA
843 CGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * *
15822107 GTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
15822172 ATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15822237 CGACTCGTTTTCTATTTTTCAT-ATTTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTT
131 CGACTCGTTTTCTATTTTTCATGA-TTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * * *
15822301 TTCAGAAGGAGTTTTGGCCCCAAACATGATAGACGTGATCCTTGTATTTTTGTTGGTATGCATAA
195 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
15822366 AAAAATTCAGCTACAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
260 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
15822431 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
325 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
15822496 AGTTCTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCATCGCAC
390 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * ** *
15822561 ATTATGTGCACACA-CCCCCCGTCCCCCCCGATCGTCGGAACCCCAATGCTTTCAGTCAGGTTCT
455 ATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * *
15822625 CCGACGATGGTATCCCGACAAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
520 CCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
* *
15822690 TCGTAACCCT---T---G---G----T-G-C-----A-G---TCCG-AT-CTTAGATTGGGAATG
585 CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * * *
15822729 AACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAACCGACCAGAGGGGCGA
650 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * * * * ** *
15822794 GATACGCAAGCCAGGGATTG-GTCGGGTCCCGCACTGCATGCTTTCGATCCTGC--CGTGCCAAC
715 GATGCGCAAGCCGGGGATCGAG-CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAC-T-ACAAC
* * * * * * *
15822856 CCTCAGTCCGATCTGATCTTAGACTGGGAATTAACTCCGTAAGGCTAAGCCAACCGATGGAACGA
777 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * *
15822921 GCGGGCGGGCGGGCGGGCATGCACAACGCCAGCCAGAGAGGCGAGATGCGCAA
842 GCGGGCGGGCGGGC-GG---GCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* *
15822974 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTACCATGCCAATCCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * *
15823039 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGCGAAGTTTCATGACAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * *
15823104 CGACTCGTTTTCTATTTTTCATGATTTTTTAAACTTTTTACGGTTCAGTATTTTTTAAAATCTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
15823169 TCAGAAGGAATTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15823234 AAAATTCAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCACCA-TT
261 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
15823297 CTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTATGGGGGTGTC
326 C-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
15823362 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCAC
390 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * * *
15823427 ATCATGTGCGCCCACCCCCCAGGCCCACC-GATTGCCGGAACCCCGATGCCGTCGGTCAGGTTCT
455 ATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* ** * * * *
15823491 CTGATGATGGTGTCCTGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGGTG
520 CCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * **
15823556 CCGTAACCCTCGGTCCGGTCCGACCTTCGACTGGGAAAGAACTCCGTATGCTTAGACTCAGAATG
585 CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * * * *
15823621 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCAGCCAGAGTGCCGG
650 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGG
** * * **
15823686 GATGCGCAAGCCGGGGATCG-GTCGGGTCCCCCTCTATGTGCTGCCAATCTTGCTACTGTAACCC
715 GATGCGCAAGCCGGGGATCGAG-CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAACCC
* * * *
15823750 TCGATCCGGTCTAATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCAACCAACGAAACGAGT
779 TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA--
* * * *
15823815 GGGCTGGCGGGCGGGCGGGCAATATGCCGGCCAGAGAGGCGGGATGCGCAA
842 --GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * *
15823866 GCCGTGGATCGATAGGGTGGTAGGTGCGTTTAGGTACATCTTCATATTT-GA-CATTGCCAATGC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCA-TGCCAATGC
** * * *
15823929 TTTTTTTCTGGC-TGT-AA-CCGTACAATGGTCTCTT-AG--TT-A-GTGAAGTTT-A--GCAAG
65 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* * * * *** **
15823983 A-GA-GCG-TTTATA-TTTTCACGA-TTTTAAAAC--TTTA--GTTCACGG--CCCTTAAAA-GC
130 ACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC-GGGATTTTTTAAAATTT
* * *
15824036 TTTCAGAA--CGTTTT-G--CCAAACTTGGTAGAC-TG-TAC-TGTA--TTT-TTGGCATTC-CA
194 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * *
15824089 AAAAAATTCAG-T--ACACTCGATGCTGTTACAAGAATTTTGTGACCA-TTGCAGAAATGCTGTC
259 AAAAAATTCAGCTAAAAACTCGAAG-TG-TACAAG-ATTTTGTGACCATTTG-AAAAAAG-TGTC
** * * ** *
15824150 CCCATTTCAGAC-C-AAAATGGCTACT-GCAG-AAA-ATGT-TAA--T-AAATGCAATTTTAGGG
319 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
15824206 AGG-G-G-GTT-TCAAGGTTT-ATGA--GAT-GGGTGCCAAT-TAA-GGCTAA-TA--A-CACCC
384 -GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * * *
15824257 -T---A-TTCA--T---CACACCCCCCAG-CCCCTCTCGATCGCCGGAACCCTAATGCCGCCGGT
448 ATCGCACATCATGTGCGCACACCCCCCCGACCCCCCT-GATCGTCGGAACCCCAATGCCGTCGGT
* * * * * **
15824311 CAGGTTCTCCGGTGATGATGTCCAGGCGAAGAAAAATGCGGCACCAGCACATGCCCG-GCCTGGC
512 CAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGC
** * *
15824375 ATGTGCTGCCGTAACCCTCGGTGTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCGTAAAC
577 ATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * *
15824440 TGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCTGGCGCTCAGCCGGCCAG
642 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAG
** * *
15824505 AGGGGTAGGATGCGCAAGCCGTGGATCG-GCCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTAT
707 AGGGGCGGGATGCGCAAGCCGGGGATCGAG-CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTA-
* * * *
15824569 CGA-AACCCTTGGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
770 CTACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * * *
15824633 GAAACGAACGGGCAGACGGGCGGGCACTACGCCGGCTAGAGAGGTGGGATGTGCAA
835 GAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * * * * *
15824689 GCAGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTTTTCCATTCCAATGCA
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * *
15824754 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCAGGGCCAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * ** *
15824819 CGACTCGTTTCCTATTTTTCATGATTTTTGAAACTTTTGGCGGTTCGAGATTTTTTAAAATTTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * *
15824884 TCAGAATGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCATGTATTTTTGTTGGCCTGCACAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
15824949 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
261 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* ** *
15825014 CAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCAATTTAAGGGGGTATGA
326 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
15825079 GTTCTCGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGCCCAAGTACCAGCACCCATCGCACA
391 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
15825144 TCATGTGCGCACACACCCTCCGGCCCCCCTAATCGTCGGAACCCTAATGCCGCCGATCAGGTTCT
456 TCATGTGCGCACAC-CCCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
*** * ** *
15825209 CCGGCGATGGTG-CCCTGGTAAAGCAAAATGCCG-CACCAGCACATGCCCGATTCCAGTATGTGC
520 CCGGCGATGGTGTCCC-GACGAAGAAAAATG-CGACACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * *
15825272 TGCCGTAACCCTCGGTCCGGTCTGATCTTAGATTGGTAATAAACTCCGTATTCTTAGACTGGGAA
583 TGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
** * *
15825337 TGAACTCTATATGCCTAAGTCAACCCACGAAACAAGCGTACGGGCGCTCAACCGGCCAGAGGGGC
648 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * * ** * * * **
15825402 AGGTTGCACAAGCCGAGGATCG-GTCGGGTTCCCGTCTGCAAGCTACCGATCCTGTTGCTGTAAC
713 GGGATGCGCAAGCCGGGGATCGAG-CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAAC
** * *
15825466 CCTCGGTCCGGTCCAATCTTAGATTGGGAATGAACTCCGTCTGCCTAAGCCAACCGACGAAACGA
777 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * *
15825531 GCGGGTGGACGGACGGGCACTACGTCGGCCAGAGAGGCGGGATGCACAA
842 GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* *
15825580 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTGCCATTGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * * * * *
15825645 ATTTTTTTTGCTTGTAAATTCGTACAATGGTCCCTTAAACCTTCATGTGAAGTTTCACGACAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
15825710 CGACTCGTTTTCTATTTTTCATGATTTTT--AA------A---------A-----T----TTTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * * *
15825749 T-AGAAAGAGTTCTGGCCCCAAACTTGGTAGACTTGATCCTTGTATTTTTGTTAGCATCCAAAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAA
15825813 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
260 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
15825878 TCAGACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
325 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
15825943 AGTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTACCAGCACCAATCGCAC
390 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
15826008 ATCATGTGCGCACACCCCTCCCCGAACCCCCC-GATCGTCGGAACGCCAATACCGTCGGTCAGGT
455 ATCATGTGCGCACA-CCC-CCCCG-ACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGT
* ** ** * * * * *
15826072 TCTCCGACGAAAGTGTCCCGGTGAAGAAAAATACGGCACCAACACATGCCCTAGCCTAGCATGTG
517 TCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTG
* ** *
15826137 CTGTCGTAACCCTCGGTCCGGTAAGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGA
582 CTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* ** * * *
15826202 ATTAACTTTGTATGCCTAAGTTAACCCACGAAACGAGCGTACGGGCGCCCAGCCGACCAGAGGGG
647 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGG
* * * * * * *
15826267 CGGGATGCGTAAGCCGGGGATCGATCGGGTCCCCATCTGCGTTCTGCCAATCCTGTTACTGCAAC
712 CGGGATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAAC
* * * *
15826332 CCTCGGTCCGGTAC-GATCTTAGACTAGGAATGAACTCCATATGCCTCAGCCAACCGATGAAACG
777 CCTCGGTCCGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* **
15826396 AGCGGGCGGGCGGGCAGGCACTACGTCGGCCAGAGACACGGGATGCGCAA
841 AGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* *
15826446 GCCGTGGATCGATAGGTTGGTAGGTGGGCTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
15826511 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * *
15826576 TGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAACTTTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * *
15826641 TCAGAAGGACTTTTTGCCCCAAAGTTGGTAGACGTGATCCCTGTATTTTTGTTGGCATGCACAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15826706 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTAT-CCCATTT
261 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
15826770 CAGACACTTTAATGGCTACTGGCA-TAAACCTGTAAAATCTCAATTTCTCTTTTAACGGGG-GTG
326 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGTGTG
* * **
15826833 AGTTCTCGAGGTATGATGAGGTATAGGGCAACCCAAT-TAAAGGGCCAAGTACCCAGCACCCATC
390 AGTTCTCGAGGTTTGATGAGGGATAGGG--GGCCAATAT-AAGGGCCAAGTA-CCAGCACCCATC
* *
15826897 GTACATCATCGTGCGCACAACCACCCCCCGGCCGCCATGCCTGATCGTCGGAACCCCAAATGCCG
451 GCACATCAT-GTGCGCAC-A-C-CCCCCCGACC-CC---CCTGATCGTCGGAACCCC-AATGCCG
** *
15826962 ATCTGGTCAGGTTCTCCCGGCGGATGGTGTCCCGGTG-AGAAAAATACGAGCACCAGCAACATGC
507 -TC-GGTCAGGTTCT-CCGGC-GATGGTGTCCCGACGAAGAAAAATGCGA-CACCAGC-ACATGC
*
15827026 TCGAGGCCCAGCCATG-GCTGCGCCGTAA-CC-C--T-CGGTCCGATC-----C---------A-
566 CCGA-GCCCAG-CATGTGCT--GCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC
** * *
15827070 -----AT-CTTAGACT-GG-ATGAACTCCGTATGCCTAAGTCAACCCACGAATTGAGCGTGCGAG
627 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
* * ** * * * * *
15827127 CGCTCCGTCGAACAGAGGGGCCGAATGCGCAAGCTGGGGATCGATCGGGTACCCCTCTGCGTGCT
692 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCT
* * ** * * * *
15827192 GCCGATCCTTCTGCCGCAACCCTCAGTATACGGTCGTGATCTTTAAGACTGAGAATGAACTTCGT
757 GCCGATCCTGCTACTACAACCCTC-G-GTCCGGTC-TGATC-TT-AGACTGGGAATGAACTCCGT
* * * * * *
15827257 ATGCCAAAGGCAACCGACGAAACGAACGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCAG
817 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGG
15827322 GATGCGCAA
882 GATGCGCAA
* * *
15827331 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGCCATGCCAATCCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
15827396 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * *
15827461 TGACTCGTTTTCTATTTTTCATGATTTTTGAAAA-TTTTTACGATTCGAGATTTTATAAAATTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTT-AAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * *
15827525 TTCAGAAGGAGTTTTGGCCCTAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAA
195 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * **
15827590 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTAAAAAAAAAGTCCCCATT
260 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
15827655 TCAAACCCTTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
325 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
15827720 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAT-AGTGGCCAAGTACCAGCACCCATTGCA
390 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG-GGCCAAGTACCAGCACCCATCGCA
* * * *
15827784 CATCATGTGCGTACACCCCCCCGACCCCCCCGATCGTCGGAACCCTAATGCCGCCGGTCAGGTTC
454 CATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
* * * * *
15827849 TCCAGCGATGGTGTCCCGACAAAGAAAAATGCGACACCAGCACATGCTCGAGCCCAGCATTTGTT
519 TCCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCT
15827914 GCCGTAA-CC-C--T-C-G---G-TC-----C--------AA-TCCG-AT-CTTAGACTGGGAAT
584 GCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * ** *
15827953 GAACACCATATGCCTGGGTCAACCCAAGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCG
649 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCG
* * * * * * *
15828018 GGATGCGTAAGCCCGGGATCGATCGGGTCCCCCTCTGCGTTCTGCCAATGCTGCT-GT-CGTAAC
714 GGATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTAC--AAC
* ** * *
15828081 CCTCGGTCTGGTCTGATCTTATTCTGAGAATGAACTCCGTATGCCTAAGCCAACCAACGAAACGA
777 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * * * *
15828146 GTGGGCGAGCAGGCGGGCACTACGTCGGCTAGAGACGCGGGATGCGTAA
842 GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* *
15828195 GCCGTGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* *
15828260 ATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAATCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
*
15828325 CGACTCGTTTTCTATTTTTCAGGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * ** * * *
15828390 TTAGAAAGTCTTTTGGCCCCAAAGTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGTACAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
15828455 AAAATTCTGCTAAAAACTCGAAGTGTACAAGGTTTTGTGACCATTTGAAAAAAGTATCCCCATTT
261 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* ** * *
15828520 CAGACACTTTAATGCCTACTGGCATTAAACCTGTCAAATCTCAAATTCTCTTTAAGGGGGTGTGA
326 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
** *
15828585 GTTCTCGAGGTTTGATGAGGGATAGGGCACCAATATAAGGGCCAAGTACCAGCACCCATCACACA
391 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * * * *
15828650 TCATGTGCGCACACCACCCCCGGCCGCCCTGATCGTCAGAACTCGAATACCGTGGGTTAGGTTCT
456 TCATGTGCGCACACC-CCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * *
15828715 TCGGCAATGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCTAGTATGTGCTG
520 CCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * * *
15828780 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGAAATGAACTCCGTATGCTTGGATTGGGAATA
585 CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * ** ** *
15828845 AACTCCATATGCCTAAGACAACCCACGAAACGAGCGTGTGGGCGCTCAATCGGCCAGAGGGGCGA
650 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * * *
15828910 GATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTACGTGCTTCCGATCCTACTAC-AGCAACCC
715 GATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTA-CAACCC
* ** * * * *
15828974 TTGGTTTGGTCCGATCGTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAAGAGC
779 TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* ** * *
15829039 GGGTGGGCGGGCGGGCACTGTGTTGGCCAGATAGGCGGGATGCGCAA
844 GGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
*
15829086 GCCAG-GAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA-CAGTGCCAATG
1 GCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCA-TGCCAATG
* *
15829149 CCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGAGAAGTTTCATGGCAA
64 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* * *
15829214 GACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACTGTTTGGGATTTTTT-AAATTT
129 GACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * * * * *
15829278 TTTCAGAAAGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGCATTTTTCTAGGCTTTCACA
194 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
15829343 AAAAAATTCAGCTAAAAACTTGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
259 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
15829408 TTCAGACACTTTAATGGCTACTGGCAGCAAACCAGTAAAATCTCAAATGCTCTTTCAA--GGGTG
324 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTG
*
15829471 TGAGTTCCCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
388 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
15829536 ACATCATGTGCGCACACCCCCCTGACCCCCC-AATCATCGGAACCCCAATGCCGTCGATCAGGTT
453 ACATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTT
* ** * * * * *
15829600 CTCCGGCAATGGTGTCCCGGGGAA-AAAAATGTGGCA-CAGCACATGCCCGAGCCCAGTACGTGT
518 CTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGC
* * ** * *
15829663 TGCCGTAACCCTTGGTCCAGTCTAATCTTAGACTGGGAATGAACTTCGTATGGTTAGACTGGGAA
583 TGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* ** *
15829728 TGAACTCCGTATGCCTAATTCAACCCACGAAATAAGCGTACGGGCGCTCAGCCGGCCAGAGGGGA
648 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * *
15829793 GGGATGCACAAGTCGGGGATC-AGCTGGGTCCCCCTCTGCGTGCTACCGATCCTACTGCCACAAC
713 GGGATGCGCAAGCCGGGGATCGAGC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAAC
* * * *
15829857 CCTTGGTCCAGTCTGATCTTACACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGA
777 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * * *
15829922 GCGGGCGGACGGGCGGGCACTGCGTTGGCCAGATAGGCGGGATGCGTAA
842 GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
15829971 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
15830036 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * *
15830101 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACTGTTCGAGATTTTTTAAAATTCTT
131 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * * * *
15830166 TCATAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTCTAGGCTTTCACAAA
196 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
**
15830230 AAAATTCAGCTAAAAACTCGAAGCATACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
261 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
15830295 CAGACAGTTTAATGGCTACTGGCAGCAAACCAGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGA
326 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
15830359 GTTCTCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
391 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
15830424 TCATGT--GCACACCCCCCCGA------T--T-GCCGGAACCCCAATACC-TCCAGTCAGGTTCT
456 TCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGT-CGGTCAGGTTCT
* * * * * * *
15830477 CCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACTTGCCTGAGCCCTGCATGTACTG
520 CCGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * * * *
15830542 CCGCAACCCTTGATCTGGTCCGATCTTTGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATG
585 CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * ***
15830607 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCTTACGGGCGCTCAGCTGACCAGAGGCATGG
650 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * * * *
15830672 GATGCACAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTG-TAGATACAACCC
715 GATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTA-CTACAACCC
* * * * *
15830736 TTGGTTCGGTCTGATCTTAGACGGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAATGAGC
779 TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * *
15830801 GGGCGGGCGGGCGGGCACTACATTGGCCAGAGAGGCGAGATGCGCAA
844 GGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
*
15830848 GCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
15830913 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
15830976 AAAGAACTCC
Statistics
Matches: 8424, Mismatches: 1068, Indels: 551
0.84 0.11 0.05
Matches are distributed among these distances:
823 85 0.01
824 18 0.00
825 5 0.00
826 6 0.00
827 259 0.03
828 77 0.01
830 3 0.00
831 1 0.00
832 11 0.00
833 2 0.00
835 5 0.00
836 3 0.00
837 7 0.00
838 5 0.00
839 8 0.00
840 10 0.00
841 5 0.00
842 5 0.00
843 10 0.00
844 7 0.00
845 6 0.00
846 12 0.00
847 8 0.00
848 8 0.00
849 1 0.00
850 13 0.00
851 17 0.00
852 2 0.00
853 4 0.00
854 7 0.00
855 11 0.00
856 10 0.00
857 55 0.01
858 57 0.01
859 34 0.00
860 9 0.00
861 16 0.00
862 9 0.00
863 194 0.02
864 565 0.07
865 324 0.04
866 783 0.09
867 329 0.04
868 12 0.00
869 134 0.02
870 21 0.00
871 24 0.00
872 20 0.00
873 23 0.00
874 9 0.00
875 65 0.01
876 41 0.00
877 416 0.05
878 5 0.00
879 10 0.00
880 128 0.02
881 6 0.00
882 15 0.00
883 36 0.00
884 32 0.00
885 1090 0.13
886 72 0.01
887 98 0.01
888 28 0.00
889 208 0.02
890 736 0.09
891 867 0.10
892 1105 0.13
893 71 0.01
894 11 0.00
895 12 0.00
896 15 0.00
898 3 0.00
899 14 0.00
900 6 0.00
901 2 0.00
902 11 0.00
903 23 0.00
904 20 0.00
905 8 0.00
906 9 0.00
907 6 0.00
908 6 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
TCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
CGGCGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGC
CGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGG
ATGCGCAAGCCGGGGATCGAGCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAACCCTC
GGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
Found at i:15826200 original size:26 final size:26
Alignment explanation
Indices: 15826164--15826216 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15826154 CCGGTAAGAT
15826164 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
* *
15826190 CTTAGACTGGGAATTAACTTTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15826216 C
1 C
15826217 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.15, G:0.25, T:0.34
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15827451 original size:885 final size:865
Alignment explanation
Indices: 15820325--15830975 Score: 11210
Period size: 885 Copynumber: 12.1 Consensus size: 865
15820315 AAAAAATTTG
* * * * **
15820325 GCCGTGGATCGATAGGGTGGTAGGTGGATTTACGTACATCTTCATATTTCTATCGGGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
15820390 ATTTTTCAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * *
15820455 CGACTTGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
*
15820520 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
196 TCAGAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15820585 AAAATTCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * * *
15820650 CAGAAACTTTAATGGCTACTGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTAACGGGGTATGA
325 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
15820715 GTTCTCGAGGTTTGATCAGGGATAGGGGGCCAATGTAAGGGTCAAGTACCAGCACCCATCGCACA
390 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * * * * * *
15820780 TTATTTACGCACACCCCCCCGACCCCTCC-AATCGTCGGAGCCCCAATGCTGCCGGTGAAGTTCT
455 TCATGTGCGCACACCCCCCCGACCCC-CCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCT
* * * * * * *
15820844 TCGACGATGGTGTCCCGACGAAGAAAAATACGACACCAGTACATACCCGAGCCCAGCATGTGCTA
519 CCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
15820909 CCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
584 CCGTAA-CC-C--T-CGGTCCGATC-T---C-------G-A------AT-CTTAGACTGGGAATG
* * * * *
15820974 AACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTACGGGCGCTCAGTCGGCCAAAGAGGCGG
625 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCGG
* * * * * *
15821039 GATGCGCAAGCCAGGGATCGACCGGGTCCCCCTCTGCGGGCTGTCGAT-CTTGCTACCGTAACCC
690 GATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTT-CTGCCGCAACCC
* * * * * * * * *
15821103 TCGATCCGATCTGATGTTAGACTGGGAATTAACTCTGTATGCCTAAGCCAACCGACGAATCGAAC
754 TCGGTTCGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* *
15821168 GGGCGGGCGGGCGGGCACTACGTCGGCCAGAAAGGCGGGATGCACAA
819 GGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * * * *
15821215 GCCATGAATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * * *
15821280 ATTTTTCTGGCTTGTAAATTCATAAAATGGTCGCTTAAGCCTTCATGTGAAGTTTCTTGGTAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* ** * *
15821345 TGACTCGTTTTCTATTTTTCACGATTTTCCAAACTTTTTAAGGTTCGGGAGTTTTTAAAATTTTT
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
15821410 TCAGGAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA
196 TCAGAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15821475 AAAATTCAGCGAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
15821540 CAGACACTTTAGTAGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTATGA
325 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
15821605 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
390 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
15821670 TCATGTGCGCACACCCGCCCCCGACCCCCCTGATCGTCGGAACCCCAA-AGCCGTCGGTCAGGTT
455 TCATGTGCGCACA-CC-CCCCCGACCCCCCTGATCGTCGGAACCCCAATA-CCGTCGGTCAGGTT
* * * * * *
15821734 CAT-CGGTGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCAAATGCCCAAGCCCAGCATGTG
517 C-TCCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * *
15821798 CTGTCGCAACCCTCGGTCTGATTTGATCTTAGACTGGGAATTAACTCT-GTATGCTAAGATTCAG
581 CTGCCGTAACCCTCGGTC-----CGATC-T---C---GAA-T--CT-TAG-A--CT--G----GG
* * * * * *
15821862 AATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCATATGG
621 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGG
* * * * ** * * * ** *
15821927 GCGGGATGCACAAGCTGGGGATCGAGCCGGTCCCCCTCTGCGTGCTATCTATCCTACTACTACAG
686 GCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCGCAA
* * **
15821992 CCCTCAGTCCAATCTGATCTTAGACT-AGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
751 CCCTCGGTTCGGTCTGATCTTAGACTGA-GAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * ** *
15822056 GAGCGGGCGGGCGGGTGGGCACTATGCCGCCCAGAGAGGCTTGACGCGCAA
815 GAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * *
15822107 GTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
15822172 ATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * *
15822237 CGACTCGTTTTCTATTTTTCAT-ATTTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTT
131 TGACTCGTTTTCTATTTTTCATGA-TTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * * * *
15822301 TTCAGAAGGAGTTTTGGCCCCAAACATGATAGACGTGATCCTTGTATTTTTGTTGGTATGCATAA
195 TTCAGAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
15822366 AAAAATTCAGCTACAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
259 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
15822431 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
324 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
15822496 AGTTCTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCATCGCAC
389 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * ** *
15822561 ATTATGTGCACACA-CCCCCCGTCCCCCCCGATCGTCGGAACCCCAATGCTTTCAGTCAGGTTCT
454 ATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCT
* * * * *
15822625 CCGACGATGGTATCCCGACAAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
519 CCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * *
15822690 TCGTAACCCTTGGTGC-AGTC-CG-ATCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACC
584 CCGTAACCCTCGGTCCGA-TCTCGAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * * *
15822752 CACGAAATGAGCGTGCGGGCGCTCAACCGACCAGAGGGGCGAGATACGCAAGCCAGGGATTGGTC
648 CACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC
* * * ** * * * *
15822817 GGGTCCCGCACTGCATGCTTTCGATCCTGCCGTG-C-CAACCCTCAGTCCGATCTGATCTTAGAC
713 GGGTCCCCCTCTGCGTGCTGCCGATCCT-TC-TGCCGCAACCCTCGGTTCGGTCTGATCTTAGAC
* * * * * *
15822880 TGGGAATTAACTCCGTAAGGCTAAGCCAACCGATGGAACGAGCGGGCGGGCGGGCGGGCATGCAC
776 TGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC-GG---GCAC
* * * *
15822945 AACGCCAGCCAGAGAGGCGAGATGCGCAA
837 TACGTCGGCCAGAGAGGCGGGATGCGCAA
* *
15822974 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTACCATGCCAATCCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * *
15823039 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGCGAAGTTTCATGACAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * * *
15823104 CGACTCGTTTTCTATTTTTCATGATTTTTTAAACTTTTTACGGTTCAGTATTTTTTAAAATCTTT
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
15823169 TCAGAAGGAATTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
196 TCAGAAAG-ATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15823234 AAAATTCAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCACCA-TT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
15823297 CTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTATGGGGGTGTC
325 C-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
15823362 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCAC
389 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * * * *
15823427 ATCATGTGCGCCCACCCCCCAGGCCCACC-GATTGCCGGAACCCCGATGCCGTCGGTCAGGTTCT
454 ATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCT
* ** * * ** *
15823491 CTGATGATGGTGTCCTGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGGTG
519 CCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* **
15823556 CCGTAACCCTCGGTCCGGTCCGACCTTCGACTGGGAAAGAACTCCGTATGCTTAGACTCAGAATG
584 CCGTAA-CC-C--T-CGGT-----C--CGA-T---------CT-CGAAT-CTTAGACTGGGAATG
* * * * *
15823621 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTC-AGCCAGAGTGCCG
625 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGA-CCAGAGGGGCG
* ** * * * *
15823685 GGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTATGTGCTGCCAAT-CTTGCTACTGTAACC
689 GGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTT-CTGCCGCAACC
* * * *
15823749 CTCGATCCGGTCTAATCTTAGACTG-GAAATGAACTCCGTATGCCTAAGCCAACCAACGAAACGA
753 CTCGGTTCGGTCTGATCTTAGACTGAG-AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * *
15823813 GTGGGCTGGCGGGCGGGCGGGCAATATGCCGGCCAGAGAGGCGGGATGCGCAA
817 ----GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * *
15823866 GCCGTGGATCGATAGGGTGGTAGGTGCGTTTAGGTACATCTTCATATTT-GA-CATTGCCAATGC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCA-TGCCAATGC
** * * *
15823929 TTTTTTTCTGGC-TGT-AA-CCGTACAATGGTCTCTT-AG--TT-A-GTGAAGTTT-A--GCAAG
65 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* * * * *** **
15823983 A-GA-GCG-TTTATA-TTTTCACGA-TTTTAAAAC--TTTA--GTTCACGG--CCCTTAAAA-GC
130 ATGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC-GGGATTTTTTAAAATTT
* * *
15824036 TTTCAGAACG-TTTT-G--CCAAACTTGGTAGAC-TG-TAC-TGTA--TTT-TTGGCATTC-CAA
194 TTTCAGAAAGATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * *
15824090 AAAAATTCAG-T--ACACTCGATGCTGTTACAAGAATTTTGTGACCA-TTGCAGAAATGCTGTCC
259 AAAAATTCAGCTAAAAACTCGAAG-TG-TACAAG-ATTTTGTGACCATTTG-AAAAAAG-TGTCC
** * * ** *
15824151 CCATTTCAGAC-C-AAAATGGCTACT-GCAG-AAA-ATGT-TAA--T-AAATGCAATTTTAGGGA
319 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG-
* * *
15824207 GG-G-G-GTT-TCAAGGTTT-ATGA--GAT-GGGTGCCAAT-TAA-GGCTAA-TA--A-CACCC-
383 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * * *
15824257 T---A-TTCA--T---CACACCCCCCAG-CCCCTCTCGATCGCCGGAACCCTAATGCCGCCGGTC
448 TCGCACATCATGTGCGCACACCCCCCCGACCCCCCT-GATCGTCGGAACCCCAATACCGTCGGTC
* * * * **
15824312 AGGTTCTCCGGTGATGATGTCCAGGCGAAGAAAAATGCGGCACCAGCACATGCCCG-GCCTGGCA
512 AGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
15824376 TGTGCTGCCGTAACCCTCGGTGTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCGTAAACT
577 TGTGCTGCCGTAACCCTC-----GGTCCGATC-T---C---GAAT---CT---TA---G---ACT
* * * * *
15824441 GGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCTGGCGCTCAGCCGGCCAGA
618 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGA
** * ** * * **
15824506 GGGGTAGGATGCGCAAGCCGTGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTATCG
683 GGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCG
* * * *
15824571 AAACCCTTGG-TCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
748 CAACCCTCGGTTC-GGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * * *
15824635 AACGAACGGGCAGACGGGCGGGCACTACGCCGGCTAGAGAGGTGGGATGTGCAA
812 AACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * * * * *
15824689 GCAGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTTTTCCATTCCAATGCA
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * *
15824754 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCAGGGCCAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * ** *
15824819 CGACTCGTTTCCTATTTTTCATGATTTTTGAAACTTTTGGCGGTTCGAGATTTTTTAAAATTTTT
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * *
15824884 TCAGAATGAGTTTTGGCCCCAAACTTGTTAGACGTGATCCATGTATTTTTGTTGGCCTGCACAAA
196 TCAGAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
15824949 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* ** *
15825014 CAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCAATTTAAGGGGGTATGA
325 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
15825079 GTTCTCGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGCCCAAGTACCAGCACCCATCGCACA
390 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * * *
15825144 TCATGTGCGCACACACCCTCCGGCCCCCCTAATCGTCGGAACCCTAATGCCGCCGATCAGGTTCT
455 TCATGTGCGCACAC-CCCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCT
** * * * ** *
15825209 CCGGCGATGGTG-CCCTGGTAAAGCAAAATGCCGCACCAGCACATGCCCGATTCCAGTATGTGCT
519 CCGGCGATGGTGTCCC-GGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
*
15825273 GCCGTAACCCTCGGTCCGGTCTGATCTTAGATTGGTAATAAACTCCGTATTCTTAGACTGGGAAT
583 GCCGTAA-CC-C--T-CGGTC----C--------G--AT---CT-CG-AATCTTAGACTGGGAAT
** * * * *
15825338 GAACTCTATATGCCTAAGTCAACCCACGAAACAAGCGTACGGGCGCTCAACCGGCCAGAGGGGCA
624 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCG
* * * * * * ** * * *
15825403 GGTTGCACAAGCCGAGGATCGGTCGGGTTCCCGTCTGCAAGCTACCGATCCTGT-TGCTGTAACC
689 GGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCT-TCTGCCGCAACC
* ** * * *
15825467 CTCGGTCCGGTCCAATCTTAGATTGGGAATGAACTCCGTCTGCCTAAGCCAACCGACGAAACGAG
753 CTCGGTTCGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * *
15825532 CGGGTGGACGGACGGGCACTACGTCGGCCAGAGAGGCGGGATGCACAA
818 CGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* *
15825580 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTGCCATTGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* * * * * *
15825645 ATTTTTTTTGCTTGTAAATTCGTACAATGGTCCCTTAAACCTTCATGTGAAGTTTCACGACAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15825710 CGACTCGTTTTCTATTTTTCATGATTTTT-AAA------A----T-----TTTTTTAGAA-----
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * *
15825754 --AG--AG-TTCTGGCCCCAAACTTGGTAGACTTGATCCTTGTATTTTTGTTAGCATCCAAAAAA
196 TCAGAAAGATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAA
15825814 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
15825879 CAGACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
325 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
15825944 GTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTACCAGCACCAATCGCACA
390 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
*
15826009 TCATGTGCGCACACCCCTCCCCGAACCCCCC-GATCGTCGGAACGCCAATACCGTCGGTCAGGTT
455 TCATGTGCGCACA-CCC-CCCCG-ACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTT
* ** * * * *
15826073 CTCCGACGAAAGTGTCCCGGTGAAGAAAAATACGGCACCAACACATGCCCTAGCCTAGCATGTGC
517 CTCCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
*
15826138 TGTCGTAACCCTCGGTCCGGTAAGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
582 TGCCGTAACCCTCGGTCC-----GATC-T---C-------G-A------AT-CTTAGACTGGGAA
* ** * *
15826203 TTAACTTTGTATGCCTAAGTTAACCCACGAAACGAGCGTACGGGCGCCCAGCCGACCAGAGGGGC
623 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGC
* * * * * *
15826268 GGGATGCGTAAGCCGGGGATCGATCGGGTCCCCATCTGCGTTCTGCCAATCCTGT-TACTGCAAC
688 GGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCT-TCTGCCGCAAC
* * * *
15826332 CCTCGGTCCGGTAC-GATCTTAGACT-AGGAATGAACTCCATATGCCTCAGCCAACCGATGAAAC
752 CCTCGGTTCGGT-CTGATCTTAGACTGA-GAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* **
15826395 GAGCGGGCGGGCGGGCAGGCACTACGTCGGCCAGAGACACGGGATGCGCAA
815 GAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* *
15826446 GCCGTGGATCGATAGGTTGGTAGGTGGGCTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
15826511 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15826576 TGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAACTTTTT
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * *
15826641 TCAGAAGGACTTTTTGCCCCAAAGTTGGTAGACGTGATCCCTGTATTTTTGTTGGCATGCACAAA
196 TCAGAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
15826706 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTAT-CCCATTT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
15826770 CAGACACTTTAATGGCTACTGGCA-TAAACCTGTAAAATCTCAATTTCTCTTTTAACGGGG-GTG
325 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC-TTTAAGGGGGTGTG
* * **
15826833 AGTTCTCGAGGTATGATGAGGTATAGGGCAACCCAAT-TAAAGGGCCAAGTACCCAGCACCCATC
389 AGTTCTCGAGGTTTGATGAGGGATAGGG--GGCCAATAT-AAGGGCCAAGTA-CCAGCACCCATC
* * *
15826897 GTACATCATCGTGCGCACAACCACCCCCCGGCCGCCATGCCTGATCGTCGGAACCCCAAATGCCG
450 GCACATCAT-GTGCGCAC-A-C-CCCCCCGACC-CC---CCTGATCGTCGGAACCCC-AATACCG
*
15826962 ATCTGGTCAGGTTCTCCCGGCGGATGGTGTCCCGGTG-AGAAAAATACGAGCACCAGCAACATGC
506 -TC-GGTCAGGTTCT-CCGGC-GATGGTGTCCCGGCGAAGAAAAATACG-GCACCAGC-ACATGC
*
15827026 TCGAGGCCCAGCCATG-GCTGCGCCGTAACCCTCGGTCCGATC-C-AATCTTAGACT-GG-ATGA
565 CCGA-GCCCAG-CATGTGCT--GCCGTAACCCTCGGTCCGATCTCGAATCTTAGACTGGGAATGA
** * * * * * * *
15827086 ACTCCGTATGCCTAAGTCAACCCACGAATTGAGCGTGCGAGCGCTCCGTCGAACAGAGGGGCCGA
626 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCGGG
* *
15827151 ATGCGCAAGCTGGGGATCGATCGGGTACCCCTCTGCGTGCTGCCGATCCTTCTGCCGCAACCCTC
691 ATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCGCAACCCTC
* * * *
15827216 AGTATACGGTCGTGATCTTTAAGACTGAGAATGAACTTCGTATGCCAAAGGCAACCGACGAAACG
756 GGT-T-CGGTC-TGATC-TT-AGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * *
15827281 AACGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCAGGATGCGCAA
816 AGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
* * *
15827331 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGCCATGCCAATCCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
15827396 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * *
15827461 TGACTCGTTTTCTATTTTTCATGATTTTTGAAAA-TTTTTACGATTCGAGATTTTATAAAATTTT
131 TGACTCGTTTTCTATTTTTCATGATTTTT-AAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * * *
15827525 TTCAGAAGGAGTTTTGGCCCTAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAA
195 TTCAGAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * **
15827590 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTAAAAAAAAAGTCCCCATT
259 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
15827655 TCAAACCCTTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
324 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
15827720 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAT-AGTGGCCAAGTACCAGCACCCATTGCA
389 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG-GGCCAAGTACCAGCACCCATCGCA
* * * * *
15827784 CATCATGTGCGTACACCCCCCCGACCCCCCCGATCGTCGGAACCCTAATGCCGCCGGTCAGGTTC
453 CATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTTC
* * * * * * * *
15827849 TCCAGCGATGGTGTCCCGACAAAGAAAAATGCGACACCAGCACATGCTCGAGCCCAGCATTTGTT
518 TCCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * **
15827914 GCCGTAACCCTCGGTCCAATC-CG-ATCTTAGACTGGGAATGAACACCATATGCCTGGGTCAACC
583 GCCGTAACCCTCGGTCCGATCTCGAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * *
15827977 CAAGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCCGGGATCGATC
648 CACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC
* * * * * * **
15828042 GGGTCCCCCTCTGCGTTCTGCCAATGCTGCTGTCGTAACCCTCGG-TCTGGTCTGATCTTATTCT
713 GGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCGCAACCCTCGGTTC-GGTCTGATCTTAGACT
* * * *
15828106 GAGAATGAACTCCGTATGCCTAAGCCAACCAACGAAACGAGTGGGCGAGCAGGCGGGCACTACGT
777 GAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGT
* * *
15828171 CGGCTAGAGACGCGGGATGCGTAA
842 CGGCCAGAGAGGCGGGATGCGCAA
* *
15828195 GCCGTGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
* *
15828260 ATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAATCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15828325 CGACTCGTTTTCTATTTTTCAGGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * *
15828390 TTAGAAAGTCTTTTGGCCCCAAAGTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGTACAAA
196 TCAGAAAG-ATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
15828455 AAAATTCTGCTAAAAACTCGAAGTGTACAAGGTTTTGTGACCATTTGAAAAAAGTATCCCCATTT
260 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* ** * *
15828520 CAGACACTTTAATGCCTACTGGCATTAAACCTGTCAAATCTCAAATTCTCTTTAAGGGGGTGTGA
325 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
** *
15828585 GTTCTCGAGGTTTGATGAGGGATAGGGCACCAATATAAGGGCCAAGTACCAGCACCCATCACACA
390 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * * *
15828650 TCATGTGCGCACACCACCCCCGGCCGCCCTGATCGTCAGAACTCGAATACCGTGGGTTAGGTTCT
455 TCATGTGCGCACACC-CCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCT
* * * * * *
15828715 TCGGCAATGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCTAGTATGTGCTG
519 CCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * *
15828780 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGAAATGAACTCCGTATGCTTGGATTGGGAATA
584 CCGTAA-CC-C--T-CGGTCCGATC-T---C--G-AAT---CT---TA------GACTGGGAATG
* * ** ** * *
15828845 AACTCCATATGCCTAAGACAACCCACGAAACGAGCGTGTGGGCGCTCAATCGGCCAGAGGGGCGA
625 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCGG
* * * * * * *
15828910 GATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTACGTGCTTCCGATCCTACTACAGCAACCCT
690 GATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCGCAACCCT
* * * * * * *
15828975 TGGTTTGGTCCGATCGTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAAGAGCG
755 CGGTTCGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG
* ** * *
15829040 GGTGGGCGGGCGGGCACTGTGTTGGCCAGATAGGCGGGATGCGCAA
820 GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
*
15829086 GCCAG-GAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA-CAGTGCCAATG
1 GCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCA-TGCCAATG
* *
15829149 CCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGAGAAGTTTCATGGCAA
64 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* * * *
15829214 GACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACTGTTTGGGATTTTTT-AAATTT
129 GATGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * * *
15829278 TTTCAGAAAGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGCATTTTTCTAGGCTTTCACA
194 TTTCAGAAAGA-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
15829343 AAAAAATTCAGCTAAAAACTTGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
258 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
15829408 TTCAGACACTTTAATGGCTACTGGCAGCAAACCAGTAAAATCTCAAATGCTCTTTCAA--GGGTG
323 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTG
*
15829471 TGAGTTCCCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
387 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * *
15829536 ACATCATGTGCGCACACCCCCCTGACCCCCC-AATCATCGGAACCCCAATGCCGTCGATCAGGTT
452 ACATCATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTT
* * ** * * *
15829600 CTCCGGCAATGGTGTCCCGGGGAA-AAAAATGTGGCA-CAGCACATGCCCGAGCCCAGTACGTGT
517 CTCCGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
*
15829663 TGCCGTAACCCTTGGTCCAGTCTAATCTTAGACTGGGAATGAACTTCGTATGGTTAGACTGGGAA
582 TGCCGTAACCCTCGGTCC-G----ATC-T---C-------GAA--TC------TTAGACTGGGAA
* ** * *
15829728 TGAACTCCGTATGCCTAATTCAACCCACGAAATAAGCGTACGGGCGCTCAGCCGGCCAGAGGGGA
623 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGC
* * * * * *
15829793 GGGATGCACAAGTCGGGGATC-AGCTGGGTCCCCCTCTGCGTGCTACCGATCCTACTGCCACAAC
688 GGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCGCAAC
* * * * * *
15829857 CCTTGGTCCAGTCTGATCTTACACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGA
752 CCTCGGTTCGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * * *
15829922 GCGGGCGGACGGGCGGGCACTGCGTTGGCCAGATAGGCGGGATGCGTAA
817 GCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
15829971 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
15830036 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * *
15830101 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACTGTTCGAGATTTTTTAAAATTCTT
131 TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * * *
15830166 TCATAAAGATTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTCTAGGCTTTCACAAAA
196 TCAGAAAGATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
**
15830231 AAATTCAGCTAAAAACTCGAAGCATACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
261 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15830296 AGACAGTTTAATGGCTACTGGCAGCAAACCAGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAG
326 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15830360 TTCTCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
391 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
15830425 CATGT--GCACACCCCCCCGA------T--T-GCCGGAACCCCAATACC-TCCAGTCAGGTTCTC
456 CATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGT-CGGTCAGGTTCTC
* * ** * * * *
15830478 CGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACTTGCCTGAGCCCTGCATGTACTGC
520 CGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
*
15830543 CGCAACCCTTGATCTGGTCCGATCTTTGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGA
585 CGTAACCC----TC-GGTCCGATC--T--C-------G-A------AT-CTTAGACTGGGAATGA
* * ***
15830608 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCTTACGGGCGCTCAGCTGACCAGAGGCATGGG
626 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCGGG
* * * * * * ***
15830673 ATGCACAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGT-AGATACAACCCT
691 ATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCT-TCTGCCGCAACCCT
* * * * *
15830737 TGGTTCGGTCTGATCTTAGACGGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAATGAGCG
755 CGGTTCGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG
* * *
15830802 GGCGGGCGGGCGGGCACTACATTGGCCAGAGAGGCGAGATGCGCAA
820 GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAA
*
15830848 GCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
1 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
15830913 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
66 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
15830976 AAAGAACTCC
Statistics
Matches: 8331, Mismatches: 1042, Indels: 789
0.82 0.10 0.08
Matches are distributed among these distances:
810 1 0.00
811 1 0.00
813 1 0.00
816 3 0.00
818 2 0.00
819 1 0.00
820 3 0.00
821 2 0.00
822 2 0.00
823 86 0.01
824 19 0.00
825 6 0.00
826 9 0.00
827 214 0.03
828 79 0.01
830 3 0.00
831 1 0.00
832 11 0.00
833 2 0.00
835 5 0.00
836 3 0.00
837 7 0.00
838 5 0.00
839 8 0.00
840 10 0.00
841 5 0.00
842 5 0.00
843 10 0.00
844 7 0.00
845 6 0.00
846 13 0.00
847 8 0.00
848 7 0.00
849 2 0.00
850 14 0.00
851 17 0.00
852 5 0.00
853 4 0.00
854 10 0.00
855 11 0.00
856 10 0.00
857 56 0.01
858 57 0.01
859 36 0.00
860 9 0.00
861 20 0.00
862 5 0.00
863 183 0.02
864 558 0.07
865 317 0.04
866 745 0.09
867 342 0.04
868 13 0.00
869 137 0.02
870 30 0.00
871 28 0.00
872 21 0.00
873 24 0.00
874 6 0.00
875 72 0.01
876 40 0.00
877 398 0.05
878 9 0.00
879 15 0.00
880 133 0.02
881 9 0.00
882 31 0.00
883 41 0.00
884 39 0.00
885 1061 0.13
886 72 0.01
887 103 0.01
888 30 0.00
889 208 0.02
890 739 0.09
891 834 0.10
892 1060 0.13
893 66 0.01
894 12 0.00
895 14 0.00
896 16 0.00
897 2 0.00
898 3 0.00
899 14 0.00
900 8 0.00
901 2 0.00
902 12 0.00
903 22 0.00
904 20 0.00
905 11 0.00
906 8 0.00
907 5 0.00
908 17 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (865 bp):
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
TGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
TCAGAAAGATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
CATGTGCGCACACCCCCCCGACCCCCCTGATCGTCGGAACCCCAATACCGTCGGTCAGGTTCTCC
GGCGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
GTAACCCTCGGTCCGATCTCGAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
GAAACGAGCGTACGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGG
TCCCCCTCTGCGTGCTGCCGATCCTTCTGCCGCAACCCTCGGTTCGGTCTGATCTTAGACTGAGA
ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGC
CAGAGAGGCGGGATGCGCAA
Found at i:15829726 original size:26 final size:26
Alignment explanation
Indices: 15829690--15829740 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15829680 CAGTCTAATC
*
15829690 TTAGACTGGGAATGAACTTCGTATGG
1 TTAGACTGGGAATGAACTCCGTATGG
15829716 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
15829741 CCTAATTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.14, G:0.29, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGG
Found at i:15832769 original size:26 final size:26
Alignment explanation
Indices: 15832740--15832791 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15832730 CCGGTCCGAT
*
15832740 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
15832766 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
15832792 GCTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:15833026 original size:876 final size:881
Alignment explanation
Indices: 15831135--15833311 Score: 3131
Period size: 876 Copynumber: 2.5 Consensus size: 881
15831125 CTCCGCGTGT
* * * * *
15831135 TGCCACAACCCTCGGTCCGATCTGATCTTAGACTAGGAATGAACACCGTATGCCTAAGCCAACCG
1 TGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
** * * *
15831200 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACATCGGCCAGAGAGGCAGGCTGCGCAAGCCATGA
66 ACGAAACGAGC-GGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGA
* *
15831265 ATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTGCCGTGCCAATGCCATTTTTT
130 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTT
* *
15831330 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCTTGTGAAGTTTCATGGCAAGACGACTCG
195 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCA
* * * *
15831395 TTTTTTATTTTTCATGATTTTTGAAAA-TTTTACT-ATTTGAGATTTTTTAAAATATTTTCAGAA
260 TTTTTTATTTTTCACGA-TTTTCAAAACTTTTA-TGGTTCGAGATTTTTTAAAATATTTTCAGAA
* * *
15831458 GGAGTTTTGGCACCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAATATT
323 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
15831523 CAACTAAAAACACAAAGTGTACAAGATTTTGTGACCATCTGAAAAAAGTGCCCCCATTTCAGACA
388 CAGCTAAAAACTCGAAGCGTACAAGATTTTGTGACCATCTGAAAAAAGTGCCCCCATTTCAGACA
* * *
15831588 CTTTAATGGCTACTGGCAGCAAACGTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTTTC
453 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
** * *
15831653 GAGGTTTGTTGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGT
518 GAGGTTTAATGAGAGATAGGGGACCAACATAAGGGCCAAGTACCAGCACCCATCACACATCATGT
15831718 GCGCACACCCATCCGGCCCCCCGATCGTCGGAACCCCAATGCCACCAGTCAAGTTCTCCGACGAT
583 GCGCACACCCATCCGGCCCCCCGATCGTCGGAACCCCAAT--CACCA-T--AG-TCTCCGACGAT
*
15831783 GGTGTCTCGACGAAGAAAAATGCGACACCAGCACATGCGCAAGCCCAGCATGTACTACCGCAACC
642 GGTGTCTCGACGAAGAAAAATGCGACACCAGCACATGCCCAAGCCCAGCATGTACTACCGCAACC
*
15831848 CTCAACCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAACAAACTTCGT
707 CTCAACCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAACAAACTCCGT
15831913 ATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACA
772 ATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACA
* *
15831978 AGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACTGATCCTGC
837 AGCCGGGGATCGGTCGGGTCCCCCTCCACATGCTACTGATCCTGC
* ** * * ** * *
15832023 TACCGTAACCTTCGATCTGGTAGGATCTTACACTGGGAATGAACTCCGTATGCCTAAGCCAAACG
1 TGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * *
15832088 ACGAAATGAGCGGACGGGCAGACGGGCACTATGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
66 ACGAAACGAGCGG-CGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGA
* *
15832153 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCTAATGCAATTTTTT
130 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTT
*
15832218 TGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCA
195 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCA
* *
15832283 TTTTTCTATTTTTCACGATTTTCAAAACCTTTTATGGTTCAAGATTTTTTAAAATCTTTTCAGAA
260 TTTTT-TATTTTTCACGATTTTCAAAA-CTTTTATGGTTCGAGATTTTTTAAAATATTTTCAGAA
* * *
15832348 GGAGTTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCAAAAAAAAATT
323 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
15832413 CAGCTAAAAACTCGAAGCGTGCAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAGACA
388 CAGCTAAAAACTCGAAGCGTACAAGATTTTGTGACCATCTGAAAAAAGTGCCCCCATTTCAGACA
*
15832478 CTTTATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
453 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
15832543 GAGGTTTAATGAGAGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
518 GAGGTTTAATGAGAGATAGGGGACCAACATAAGGGCCAAGTACCAGCACCCATCACACATCATGT
* * *
15832608 GCGCACACCCA-CCGGCCCCCCGGATCGTCGGAACCCTAAT-A-C-T-G-C-CGGTC-A-GGT-T
583 GCGCACACCCATCCGGCCCCCC-GATCGTCGGAACCCCAATCACCATAGTCTCCGACGATGGTGT
* * * * *
15832663 CTCTGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCA
647 CTC-GACGAAGAAAAATGCGACACCAGCACATGCCCAAGCCCAGCATGTACTACCGCAACCCTCA
** * * *
15832728 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGTATGG
711 ACCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAACAAACTCCGTATGC
* * * * * * ** **
15832793 CTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTTAGCCGGTCAGAGGGGTGGGATGCGTAAGTT
776 CTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCC
* * *
15832858 GGGGATCGGT-GAGGTCCCCCTCCACATGTTGTCT-TTCCTGC
841 GGGGATCGGTCG-GGTCCCCCTCCACATGCT-ACTGATCCTGC
15832899 TGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
1 TGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * *
15832964 ACGAAACGAGCTGGCGGGCGGGCGGGCACTATGCCGGTCGGAGAGGCGGGATGCGTAAGCCGTGT
66 ACGAAACGAGC-GGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGA
* *
15833029 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTC
130 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTT
* *
15833094 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTTA
195 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCA
* * *
15833159 TTTTTTATTTTTTACGATTTTCAAAACTTTTTAGGGTTCGAGATTTTTTAAAATTTTTTCAGAAG
260 TTTTTTATTTTTCACGATTTTCAAAAC-TTTTATGGTTCGAGATTTTTTAAAATATTTTCAGAAG
* * *
15833224 GAGTTTTGGCCCCAAACTTGGTAGACGCGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTT
324 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
15833289 AGCTAAAAACTCGAAGTGTACAA
389 AGCTAAAAACTCGAAGCGTACAA
15833312 AAAAATTCAA
Statistics
Matches: 1151, Mismatches: 127, Indels: 35
0.88 0.10 0.03
Matches are distributed among these distances:
874 1 0.00
875 139 0.12
876 440 0.38
877 5 0.00
878 3 0.00
879 1 0.00
881 1 0.00
884 1 0.00
886 1 0.00
887 3 0.00
888 240 0.21
889 22 0.02
890 294 0.26
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.26
Consensus pattern (881 bp):
TGCCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
ACGAAACGAGCGGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGAA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTT
GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCAT
TTTTTATTTTTCACGATTTTCAAAACTTTTATGGTTCGAGATTTTTTAAAATATTTTCAGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGCGTACAAGATTTTGTGACCATCTGAAAAAAGTGCCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTAATGAGAGATAGGGGACCAACATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCG
CACACCCATCCGGCCCCCCGATCGTCGGAACCCCAATCACCATAGTCTCCGACGATGGTGTCTCG
ACGAAGAAAAATGCGACACCAGCACATGCCCAAGCCCAGCATGTACTACCGCAACCCTCAACCCG
GTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAACAAACTCCGTATGCCTAAG
TCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGA
TCGGTCGGGTCCCCCTCCACATGCTACTGATCCTGC
Found at i:15834811 original size:702 final size:704
Alignment explanation
Indices: 15833409--15834861 Score: 2164
Period size: 702 Copynumber: 2.1 Consensus size: 704
15833399 CCCTTGGTCT
* * * * *
15833409 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTTAGCCAACTGATGAAATGAGCGGGCGGG
1 GGTCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACGGACGAAAT--GCGAGCGGG
* ** * *
15833474 CGGGCGGGCACTGTGTTGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
64 CGGACGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGT
* *
15833539 GGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATAC
129 GGGTTTAGGCACATCTTCATATTTCCACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
* *
15833604 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGAT
194 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACCCGTTTTCTATTTTTCACGAT
* * **
15833669 TTTTGAAACTTTTTATGGTTCGGGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTCACCCCAAAC
259 TTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTCACCAAAAAC
* *
15833734 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATTCAGCTAAAAACTCGAAG
324 TTGGTAGACGTGATCCTTGTATTTTTATTGACATGCACAAAAAAAATTCAGCTAAAAACTCGAAG
* * *
15833799 TGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
389 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAATGGCTACTCGC
* * * *
15833864 AGCAAACCTGTAAAATCTAAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
454 AACAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGAGAT
15833929 AGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTCGGC
519 AGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTCGGC
* * * * * *
15833994 CCCCCCGATCGCCGGAACCCCAATGTCGTCGGTCAGGTTCTTCGACGATGGTTCTCGACGAAGAA
584 CCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTTCCCGACGAAGAA
*
15834059 AAATGCAACACCAGCACATGCCCAAGCCCAGCAAGTGCTGCTGCAACCCTCAATCC
649 AAATACAACACCAGCACATGCCCAAGCCCAGCAAGTGCTGCTGCAACCCTCAATCC
* *
15834115 GGTCAGATCTTAGACTAGGAATGAACTCCGTAGGCCTAAGCCAACGGACG-AAT-CGAGCGGGCG
1 GGTCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACGGACGAAATGCGAGCGGGCG
* *
15834178 GACGGGCATTACGTCGGTCAGAGAGGCGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGG
66 GACGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGG
* * *
15834243 GTTTAGGGACATCTTCATATTTCCGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCTTACAA
131 GTTTAGGCACATCTTCATATTTCCACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
15834308 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACCCGTTTTCTATTTTTCACGATTT
196 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACCCGTTTTCTATTTTTCACGATTT
**
15834373 TTGAAACTTTTTACGGTTCGAGA-TTTTTTAAAATTTTTTCA-AAGGGAGTTTTTGCCAAAAACT
261 TTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGAA-GGAGTTTTCACCAAAAACT
*
15834436 TGGTAGACGTGATCCTTGTATTTTTATTGACATGCAC-AAAAATATTCAGCTAAAAACTCGAAGT
325 TGGTAGACGTGATCCTTGTATTTTTATTGACATGCACAAAAAAAATTCAGCTAAAAACTCGAAGT
*
15834500 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACAATTTAATGGCTACTCGCA
390 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAATGGCTACTCGCA
* * *
15834565 ACAAACCTGTAAAGTCTCAAATGCTCTTTAAGGTGGTGTGAGTTCCCGAGGTTTGATGAGAGATA
455 ACAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGAGATA
* * * * *
15834630 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCTTGTGCGCACAGCGCCTTGGCC
520 GGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTCGG-C
* * **
15834695 CCCCCCGATCATCGAAACCCCAATGCCGCCGGTCAGGTTCTCC-AGTGATGGTGTCCCGGGGAAG
584 CCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGA-CGATGGT-TCCCGACGAAG
*** * * * * **
15834759 AAAAATATGGCACCAGCACATGCCCGAGCCGAGCATGTGCTG-TCGTAACCCTCCGTCC
647 AAAAATACAACACCAGCACATGCCCAAGCCCAGCAAGTGCTGCT-GCAACCCTCAATCC
* * **
15834817 GATCTGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCAAC
1 GGTCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
15834862 CCATGAAACG
Statistics
Matches: 670, Mismatches: 72, Indels: 14
0.89 0.10 0.02
Matches are distributed among these distances:
700 206 0.31
701 113 0.17
702 304 0.45
705 3 0.00
706 44 0.07
ACGTcount: A:0.26, C:0.22, G:0.24, T:0.27
Consensus pattern (704 bp):
GGTCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACGGACGAAATGCGAGCGGGCG
GACGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTCCACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACCCGTTTTCTATTTTTCACGATTT
TTGAAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGAAGGAGTTTTCACCAAAAACTT
GGTAGACGTGATCCTTGTATTTTTATTGACATGCACAAAAAAAATTCAGCTAAAAACTCGAAGTG
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAATGGCTACTCGCAA
CAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGAGATAG
GAGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTCGGCCC
CCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTTCCCGACGAAGAAAA
ATACAACACCAGCACATGCCCAAGCCCAGCAAGTGCTGCTGCAACCCTCAATCC
Found at i:15836274 original size:685 final size:688
Alignment explanation
Indices: 15834964--15836393 Score: 2235
Period size: 685 Copynumber: 2.1 Consensus size: 688
15834954 CTGCTGCCAT
* *
15834964 AACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAAC-TCTGTATGCCTAAGCCAACCGACGAA
1 AACCCTCAGTCCGGTCTGATCTTAGACTGGAAATGAACTTC-GTATGCCTAAGCCAACCGACGAA
** ** * *
15835028 ATGAGTGGGCGGGCAGGCACTGCATCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
65 ACAAGCAGGCGGGCAGGCACTACATCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGG
* * ** *
15835093 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCCTGCCAATGCCATTTTTTTAGCTTGTA
130 GTGGTAGGTGGGTTTAGGAACATCTTCAAATTTCGGCCATGCCAATGCCATTTTTTTAGCTTGTA
*
15835158 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATT
195 AATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATT
* *
15835223 TTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGTAATTTTGG
260 TTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGTAATTTTGG
* * * * * * *
15835288 CCCCAAACTTGGTGGACGTGATCCTTGTATTTTTTTTGGTATGCACAAAAATATTCGGCTAAAAA
325 CCCCAAACTTGCTAGAAGTGATCCTTGTATGTTTTTTGGCATGCAAAAAAATATTCAGCTAAAAA
15835353 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
15835418 ATTGGCAGCAAACCTGTAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGA
455 ACTGGCAGCAAACCTGTAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCGAGGTTTGATGA
*
15835483 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCC
520 GGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCACACATCATGTGCGCACACCCCC
* *
15835548 CCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCT-C-CGA-T-GAAGAAAAAT
585 CCGGCCCCCCCGATCACCGAAACCCCAATACCGCCGGTCAGGTTCTCCACGAGTCGAAGAAAAAT
*
15835609 GCGGTACCAGCACATGCCTGAGCCCAGCATGTGCTACCGA
650 GCGG-ACCAGCACATGCCCGAGCCCAGCATGTGCTACCGA
* *
15835649 AACCCTCAATCCGGTCTGATCTTAGACTGGAAATGAACTTCGTATGCCTAAGCGAACCGACGAAA
1 AACCCTCAGTCCGGTCTGATCTTAGACTGGAAATGAACTTCGTATGCCTAAGCCAACCGACGAAA
* * *
15835714 CAAGCAGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGAGATGCGCAAGCCGTGTATCGATAGGG
66 CAAGCAGGCGGGCAGGCACTACATCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGG
*
15835779 TGGTAGGTGGGTTTAGGAACATCTTCAAATTTCGGCCATGCCAATGCCATTTTTTTGGCTTGTAA
131 TGGTAGGTGGGTTTAGGAACATCTTCAAATTTCGGCCATGCCAATGCCATTTTTTTAGCTTGTAA
*
15835844 ATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
196 ATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTT
* *
15835909 TTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAG-GATTTTTGC
261 TTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGTAATTTTGGC
15835973 CCCAAACTTGCTAGAAGTGATCCTTGTATGTTTTTTGGCATGCAAAAAAATATTCAGCTAAAAAC
326 CCCAAACTTGCTAGAAGTGATCCTTGTATGTTTTTTGGCATGCAAAAAAATATTCAGCTAAAAAC
*
15836038 TCGAAGTGTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
391 TCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
*
15836103 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGACTTCTCGAGGTTTGATG
455 ACTGGCAGCAAACCTGT-AAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCGAGGTTTGATG
15836168 AGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCACACATCATGTGCGCACACCCC
519 AGGGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCACACATCATGTGCGCACACCCC
* *
15836233 CTCGG-CCCCCCGATCGCCGAAACCCCAATACCGCCGGTCAGGTTCTCCAGCGATGGTGTCTCGA
584 CCCGGCCCCCCCGATCACCGAAACCCCAATACCGCCGGTCAGGTTCTCCA-CGA----G--T---
* * ** *
15836297 CGAAGAAAAATTCGGCCCAGCACATGCCCGAGCCCAGCATGTGCTGTCGT
639 CGAAGAAAAATGCGGACCAGCACATGCCCGAGCCCAGCATGTGCTACCGA
* *
15836347 AACCCTCGGTCCGGTCTGATCTTAGACTGGAAATGAACTCCGTATGC
1 AACCCTCAGTCCGGTCTGATCTTAGACTGGAAATGAACTTCGTATGC
15836394 TTGGACTGGG
Statistics
Matches: 677, Mismatches: 51, Indels: 21
0.90 0.07 0.03
Matches are distributed among these distances:
684 94 0.14
685 377 0.56
686 115 0.17
688 3 0.00
695 1 0.00
698 74 0.11
699 13 0.02
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.27
Consensus pattern (688 bp):
AACCCTCAGTCCGGTCTGATCTTAGACTGGAAATGAACTTCGTATGCCTAAGCCAACCGACGAAA
CAAGCAGGCGGGCAGGCACTACATCGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGAACATCTTCAAATTTCGGCCATGCCAATGCCATTTTTTTAGCTTGTAA
ATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTT
TTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGTAATTTTGGC
CCCAAACTTGCTAGAAGTGATCCTTGTATGTTTTTTGGCATGCAAAAAAATATTCAGCTAAAAAC
TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
CTGGCAGCAAACCTGTAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCGAGGTTTGATGAG
GGATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCACACATCATGTGCGCACACCCCCC
CGGCCCCCCCGATCACCGAAACCCCAATACCGCCGGTCAGGTTCTCCACGAGTCGAAGAAAAATG
CGGACCAGCACATGCCCGAGCCCAGCATGTGCTACCGA
Found at i:15836686 original size:159 final size:159
Alignment explanation
Indices: 15836397--15836813 Score: 593
Period size: 159 Copynumber: 2.6 Consensus size: 159
15836387 CGTATGCTTG
* *
15836397 GACTGGGAATAAACTTCGTATGCCTAAGTCAACCCACGAAACGAGAGTGCGGGCGCTCAGCCGGC
1 GACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * *
15836462 CAGAGGGGCGGGTTGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTATCGATCCTACT
66 CAGAGGGGCGGGTTGCGCAAGCCGGGGATCGCTCGGGTCCCCCTCTACGTGCTACCAATCCTACT
*
15836527 ACCGCAACACTCGGTACGGTCTGATCTTA
131 ACCGCAACACTCGGTACGATCTGATCTTA
* *
15836556 GACTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
1 GACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* *
15836621 CAGAGGGGCGGGTTGCGTAAGGCGGGGATCGACT-GGGTCCCCCTCTACGTGCTACCAATCCTAC
66 CAGAGGGGCGGGTTGCGCAAGCCGGGGATCG-CTCGGGTCCCCCTCTACGTGCTACCAATCCTAC
* *
15836685 TACCGTAACACTCGGTCCGATCTGATCTTA
130 TACCGCAACACTCGGTACGATCTGATCTTA
* * * * *
15836715 GACTGGGAATGAACTTCGTATGCCTAAGCCAACCAACGAAATGAGCGGGCGGGCAGGCACTACGC
1 GACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC--GCTC-A-GC
* * * *
15836780 CGGCCAGAGAGGCGGGATGCGCATGCCGTGGATC
62 CGGCCAGAGGGGCGGGTTGCGCAAGCCGGGGATC
15836814 AATAGGGTGG
Statistics
Matches: 228, Mismatches: 25, Indels: 6
0.88 0.10 0.02
Matches are distributed among these distances:
159 193 0.85
160 1 0.00
161 3 0.01
162 1 0.00
163 30 0.13
ACGTcount: A:0.22, C:0.29, G:0.31, T:0.18
Consensus pattern (159 bp):
GACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
CAGAGGGGCGGGTTGCGCAAGCCGGGGATCGCTCGGGTCCCCCTCTACGTGCTACCAATCCTACT
ACCGCAACACTCGGTACGATCTGATCTTA
Found at i:15837440 original size:26 final size:26
Alignment explanation
Indices: 15837411--15837463 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15837401 CCGGTCCGGT
* *
15837411 CTTAGATTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15837437 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15837463 C
1 C
15837464 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15838332 original size:26 final size:26
Alignment explanation
Indices: 15838276--15838333 Score: 75
Period size: 26 Copynumber: 2.3 Consensus size: 26
15838266 CCTCGGTCCG
*
15838276 CTCCG-AT-CTTAGATTGGGAATGAA
1 CTCCGTATACTTAGACTGGGAATGAA
*
15838300 GTCCGTATACTTAGACTGGGAATGAA
1 CTCCGTATACTTAGACTGGGAATGAA
*
15838326 CTTCGTAT
1 CTCCGTAT
15838334 GCCTAAGTCA
Statistics
Matches: 28, Mismatches: 4, Indels: 2
0.82 0.12 0.06
Matches are distributed among these distances:
24 4 0.14
25 2 0.07
26 22 0.79
ACGTcount: A:0.28, C:0.17, G:0.24, T:0.31
Consensus pattern (26 bp):
CTCCGTATACTTAGACTGGGAATGAA
Found at i:15839162 original size:26 final size:26
Alignment explanation
Indices: 15839124--15839176 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15839114 ACACTTCGAT
15839124 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15839150 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15839176 C
1 C
15839177 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15839873 original size:856 final size:855
Alignment explanation
Indices: 15836698--15840958 Score: 5222
Period size: 856 Copynumber: 4.9 Consensus size: 855
15836688 CGTAACACTC
* * * *
15836698 GGTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCAACGAAATGAGC--
1 GGTCCGGTCCGATCTTAGACTGGGAATGAACTT-GTATGCCTAAGCCAACCGACGAAACGAGCGG
* * *
15836761 G-GGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCATGCCGTGGATCAATAGGGTGGT
65 GCGGCGGGCGGGCACTACG-CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
15836825 AGGTGGGTTTAGGCACATCTTCATATTTCTGCTCTGCCAATGCCATTTTTTTGGCTTGTAAATTC
129 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCATTTTTTTGGCTTGTAAATTC
15836890 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
194 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * *
15836955 TGATTTTTGAAACATTTTACGGTT-TGAGATTTTTAAAATTTTTTCGGAAGGAATTTTGGTCCCA
259 TGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* *
15837019 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAGATTCAGCTAAAAACTCGA
323 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGG
* * * *
15837084 AGTTTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT-GGACACTTTAATGGCTACC
388 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACT
*
15837148 GGCAGCAAACCTGTAAAATGTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
453 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
15837213 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTTGCACATCATGTGCGCACACCCCCCC
518 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTGCGCACACCCCCCG
* * * * * * *
15837278 TCGCCCCCCGATTGCCAGAACCCTAATGCCGCTGGTTAGGTTCTCCGACGATGGTGTCCCGACGA
583 GC-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGA
* * * * * **
15837343 AGAAAAATATGGCACCAGCACATGCCCGAGCCCAACATGTGCCGCCGTAACCCTCGATCCGGTCC
647 AGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCACTCC
* * *
15837408 GGTCTTAGATTGGGAGTGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
712 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * *
15837473 CCCACGAAACGAGCATGCGGGCGCTCAGTCGGCCAGAGGGACGGGATGAATAAACCGAGGATCGT
777 CCCACGAAACGAGCGTGCGGGCGCTTAGCCGG-C-TA-GGA---GATG------GC-AGGAT-G-
* * * * *
15837538 ACGGGCCCCCCTCTACGTGTTGCCAATCTTGCTATCGTAACCCTA
827 -C--G--------TGC-TG-T--CAATCCTGCTACCG-CACCCTT
* * *
15837583 GGTCCGGTCTGATCTTAGGCTGGGAATGAACATTGTATGCCTAAGCCAACCGACGAAATGAGCGG
1 GGTCCGGTCCGATCTTAGACTGGGAATGAAC-TTGTATGCCTAAGCCAACCGACGAAACGAGCGG
*
15837648 GTGGGCGGGCGGGCACTACGCAGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGG
65 G-CGGCGGGCGGGCACTACGC-GGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * * *
15837713 TAGGTGGGTTTAGGCATATCTTCATATTTCTGCCGTGCCAATACCATTTTTCTGGCTTGTAAATT
128 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCATTTTTTTGGCTTGTAAATT
*
15837778 CATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGTCGACTCGTTTTCTATTTTTC
193 CATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * ** *
15837843 ACGATTTTTGAAA-TTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAAAAATATTTTTGGCCCC
258 ATGATTTTTGAAACTTTTTACGGTTCAGGA-TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCC
* * * *
15837907 AAACTTGGCAGACATCATCTTTGTATTTTTGTTGGCATGCACAAAAAAATT-AGCTAAAAACTC-
322 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
15837970 GATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTA
387 GA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTA
* *
15838034 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCGAGATTTGATGA
451 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* * * *
15838099 GGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACATCATGTGCGCAAACCCCC
516 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTGCGCACA-CCCC
* * * *
15838164 CCTGG--CCCCCTATTGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGATGATGGTGTCCCG-
580 CC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGA
* * * ** *
15838226 -G-TG----A-A--G-A--A--AAATGCCCGAGCCCAGCATGTGTTATCGCAACCCTCGGTCCGC
644 CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAC
* * * *
15838277 TCCGATCTTAGATTGGGAATGAAGTCCGTATACTTAGACTGGGAATGAACTTCGTATGCCTAAGT
709 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * ** * * * *
15838342 CAACCCATGAAACGAGTGTGCGGGCGC-TCCCCCGCCA-GAGA-GGC-GG--G-ATGC-G-CAAG
774 CAACCCACGAAACGAGCGTGCGGGCGCTTAGCCGGCTAGGAGATGGCAGGATGCGTGCTGTCAAT
* ** * *
15838398 CCGGGGATCG-A-CC-G
839 CCTGCTACCGCACCCTT
* ** ** * * * * *
15838412 GGTCC---CCG-T-TTACA-TGCTACCGATCCTGCTA-CCCCAA-CC--CTCGATCTGATA-G-G
1 GGTCCGGTCCGATCTTAGACTGGGAATGAACTTG-TATGCCTAAGCCAAC-CGA-C-GAAACGAG
* * *
15838465 CGAGGATCGGGCAGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGTGCAAGCCGTGGATCAATA
62 CG-GG--C-GGCGGGCGGGCACTACG-CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* * *
15838530 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCTTG
122 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCATTTTTTTGGCTTG
*
15838595 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTA
187 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* *
15838660 GTTTTCATGATTTTTGAAACTTTTTACGGTTC-GAGATTGTTTAAAATTTTTTCAGAAGGTGTTT
252 TTTTTCATGATTTTTGAAACTTTTTACGGTTCAG-GATT-TTTAAAATTTTTTCAGAAGGAGTTT
* * *
15838724 TGGACCCAATCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAA
315 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
15838789 AAACT-GGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTC-GAACACTTT
380 AAACTCGG-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAG-ACACTTT
* *
15838851 AATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGTTCTCGAGG
443 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* ** * *
15838916 TTTGATGAGGGATAGGGGGCCAATATAGGGGCTGAGTACCAGTACCCATCGCACATCATGTGCGC
508 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTGCGC
* * *
15838981 GCACCCCCCCGGCCCCCCCGATCATCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGGT
573 ACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGT
* * ** *
15839046 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGGGCGTAGCATGTGCTGTCGCAACCCTC
637 GTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * *
15839111 GGTACACTTCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
702 GGTCCACTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* **
15839176 CCTAAGTCAACCCATGAAACGAGCGTGTAGGCGCTTAGCCGGCTA-GAG-TGGCAGGATGCGTGC
767 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTTAGCCGGCTAGGAGATGGCAGGATGCGTGC
*
15839239 TGTCGATCCTGCTACCGCAGCCCTT
832 TGTCAATCCTGCTACCGCA-CCCTT
* * *
15839264 GGTCTGGTCCAATCTTAGACTGGGAATGAACACTGTATGCCTAAGCCAACCGACGAAACGAGCGG
1 GGTCCGGTCCGATCTTAGACTGGGAATGAAC-TTGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * *
15839329 GCGTCGGGCGGGCACTACGCAGGCCAGAGAGGCGGGAT-CGCAAGTCGTGGATCGATAGGGTGGC
65 GCGGCGGGCGGGCACTACGC-GGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
15839393 AGGTGCGTTTAGGCACATCTTCATATTTTTGCCCTGCCAATACCATTTTTTTGGCTTGTAAATTC
129 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCATTTTTTTGGCTTGTAAATTC
* *
15839458 ATACAGTGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTTTTCA
194 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* *
15839523 TGATTTTTGGAACTTTTTACGGTTCAGGATTTTTCAATATTTTTTCAGAAGGAGTTTTGGCCCCA
259 TGATTTTTGAAACTTTTTACGGTTCAGGATTTTT-AAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* * * * * *
15839588 AACTTGGCAGAAGTGATCTTTGTATTTCTGTTGGTAAGCACAAAAAAATTCAGCTAAAAACTCGG
323 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGG
* *
15839653 AGCGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTTCAGACACTTTAATGGCTACT
388 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACT
* * *
15839718 GGAAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATAAGG
453 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
*
15839783 GATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCTTCGCACATCATGTGCGCACACCCCCCG
518 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTGCGCACACCCCCCG
* *
15839848 GCCCCCCCGATCGTCGAAACCCCAATACCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAA
583 GCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAA
* * *
15839913 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGTTGCCGCAACCCTCGGTCCAGTCCG
648 GAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCACTCCG
* *
15839978 ATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAAC
713 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* *
15840043 CCACGAAACGAGCGTGCGGGTGTTCAGCTGGCCAGAGGGGCGGGATGCTCAAGCCGGAGATTGGC
778 CCACGAAACGAGCGTGC-GG-G--C-GCT-----TA---GC-CG--GCT--A---GGAGA-TGG-
* * * * * * *
15840108 CGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCTT
820 CAGG-------ATGCGTGCTGTCAATCCTGCTACCGCACCCTT
** * *
15840151 CGGTCCGGTTTGATCTTAGATTGGGTATGAACTTCGTATGCCTAAGCCAACCGAC-ATAACGAGC
1 -GGTCCGGTCCGATCTTAGACTGGGAATGAACTT-GTATGCCTAAGCCAACCGACGA-AACGAGC
*
15840215 GGGCGGGCGAGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
63 GGGC-GGCGGGCGGGCACTACG-CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
* * *
15840280 GGTAGGTGGGTTTAGGCACATCTTCATATTGCTGCCGTACCAATGCCATTTTTTTGGCTTGTAAA
126 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCATTTTTTTGGCTTGTAAA
* *
15840345 TTAATACAATGGTCCCCTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
191 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * *
15840410 TTACGATTTTTAAAACTTTTTACGGTTCAAGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGCC
256 TCATGATTTTTGAAACTTTTTACGGTTCAGGA-TTTTTAAAATTTTTTCAGAAGGAGTTTTGG-C
* *
15840475 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCACAAAAAATTTCAGCTAAAAA
319 CCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
15840540 CTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAAACACTTTAATGG
383 CTCGGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGG
* * * * *
15840605 CTACTGGCAGCAAACCTATAAAATCTCAAATGTTCTTTAAGGGGTTGTGAGTTCTTGAGGTTTGT
448 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* *
15840670 TGAGGGATAGGGGGCCAGTGTAAGGGCCAAGTACCAGCA-CCTATCGCACATCATGTGCGCACAC
513 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCT-TCGCACATCATGTGCGCACAC
* * *
15840734 CCCCCGGCCCACCCGATCGTCGGAACCCCAATGCCGTCGGTCCGGTTCTCCGACGATGGTGTCCC
577 CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCC
* * *
15840799 GACGAAGAAAAATATGGCACTAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCC
642 GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
* *
15840864 GA-TCCTATTTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
707 -ACTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
15840928 AGTCAACCCACGAAACGAGCGTGCGGGCGCT
771 AGTCAACCCACGAAACGAGCGTGCGGGCGCT
15840959 CATCCGGCCA
Statistics
Matches: 2953, Mismatches: 305, Indels: 234
0.85 0.09 0.07
Matches are distributed among these distances:
819 1 0.00
820 6 0.00
821 6 0.00
822 10 0.00
823 203 0.07
824 93 0.03
825 192 0.07
826 56 0.02
828 1 0.00
829 6 0.00
830 2 0.00
831 1 0.00
833 10 0.00
836 1 0.00
837 2 0.00
839 3 0.00
841 118 0.04
842 12 0.00
843 2 0.00
845 1 0.00
846 3 0.00
847 1 0.00
848 8 0.00
849 1 0.00
851 2 0.00
852 5 0.00
855 7 0.00
856 496 0.17
857 175 0.06
858 11 0.00
859 10 0.00
860 7 0.00
861 9 0.00
862 1 0.00
863 1 0.00
864 2 0.00
866 1 0.00
867 2 0.00
869 3 0.00
870 2 0.00
871 2 0.00
872 121 0.04
874 2 0.00
876 1 0.00
877 1 0.00
878 3 0.00
879 1 0.00
880 4 0.00
881 3 0.00
884 1 0.00
885 58 0.02
886 2 0.00
887 63 0.02
888 275 0.09
889 306 0.10
890 193 0.07
891 36 0.01
892 407 0.14
893 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (855 bp):
GGTCCGGTCCGATCTTAGACTGGGAATGAACTTGTATGCCTAAGCCAACCGACGAAACGAGCGGG
CGGCGGGCGGGCACTACGCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
GTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCATTTTTTTGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
ATTTTTGAAACTTTTTACGGTTCAGGATTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC
TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGGAGT
GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATGGCTACTGGC
AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTGCGCACACCCCCCGGCC
CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAA
AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCACTCCGATC
TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
CGAAACGAGCGTGCGGGCGCTTAGCCGGCTAGGAGATGGCAGGATGCGTGCTGTCAATCCTGCTA
CCGCACCCTT
Found at i:15840009 original size:26 final size:26
Alignment explanation
Indices: 15839980--15840032 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15839970 CCAGTCCGAT
*
15839980 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGCAATGAACTCCATATG
*
15840006 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCATATG
15840032 C
1 C
15840033 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCATATG
Found at i:15840902 original size:26 final size:26
Alignment explanation
Indices: 15840873--15840924 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
15840863 CGATCCTATT
15840873 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
15840899 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
15840925 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:15841424 original size:26 final size:26
Alignment explanation
Indices: 15841388--15841440 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15841378 CTGATCAAAT
15841388 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15841414 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15841440 C
1 C
15841441 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15842352 original size:26 final size:26
Alignment explanation
Indices: 15842301--15842353 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15842291 CCGGTCCGAT
*
15842301 CTTAGACTGGGAATCAATTCCATATG
1 CTTAGACTGGGAATCAACTCCATATG
* *
15842327 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCATATG
15842353 C
1 C
15842354 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCATATG
Found at i:15843229 original size:26 final size:26
Alignment explanation
Indices: 15843191--15843243 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15843181 CTGCTCTGAT
*
15843191 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15843217 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15843243 C
1 C
15843244 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15844116 original size:26 final size:26
Alignment explanation
Indices: 15844076--15844128 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15844066 CCGGTCCGAT
*
15844076 CTTAGACTGGAAATGAACTCTGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
* *
15844102 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
15844128 C
1 C
15844129 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:15844395 original size:885 final size:882
Alignment explanation
Indices: 15841158--15846112 Score: 6475
Period size: 885 Copynumber: 5.6 Consensus size: 882
15841148 GTGGATCAAT
*
15841158 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCA
1 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * *
15841223 ACCATCGCACATAATGTGCGTACACCCCCCCTGGCCCCCCCGATCGTCGAAACCCTAATGCCGCC
66 CCCATCGCACATCATGTGCGCACACCCCCCC-GGCCCCCCCGATCGCCGAAACCCCAATGCCGCC
** ** * *
15841288 GGTCAGGTTCTCCGGGGATGGCATCCCGACGAAGAAAAATACGGCACCAGCACATGACCGAGCCT
130 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
* * * **
15841353 AGCATGTGCTGCCGTAACCCTCGGTCTGATCAAATCTTAGACTGGGAATGAACTCCGTATGCTTA
195 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* *
15841418 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTAAGCCGGC
260 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
*
15841483 CA-AGGGGTGGGATGCGCAAGCTGGGGATCCTGCTGTCGGAACCCTCTGGGTACGGTCGTGTCCC
325 CAGAGGGGCGGGATGCGCAA------G---CTG--G--GG-A---TC--GGT-C-G--G-GTCCC
* * * * * * * * *
15841547 CCTCTGTGTGTTGCCTATCCTACTACCGAAACCCTCTG-TCTGATCCGATCATAGACTGGGAATG
366 CCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTC-GATCCGGTCTGATCTTAGACTGGGAATG
** * * * * * *
15841611 AGTTCTGTATGCCAAAGCCAATCGACTAAACGAGAGGGCGGACGGGAGGGCACTACGCCGGCCAA
430 AACTCCGTATGCCTAAGCCAACCGACGAAA-GAGA-----G-CGGGCGGGCACTACGCCGGCCAG
* * * * *
15841676 AGAGGAGGGATGCACAAGTCGTTGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATT
488 AGAGGCGGGATGCACAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
15841741 TCTGCCCTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
553 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
*
15841806 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCGG
618 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
* * * * *
15841871 GATTTTCTAAAATTTTTTCAGAAGGATTTTTGGCCCTAAACTTGGTAGACGTGATACTTGTATTT
683 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTT
*
15841936 TTGTTGGCATGCACAAAAAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
748 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
15842001 AAAAAGTGTCCCAATTTCAGACAGTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
813 AAAAAGTGTCCCCATTT-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
15842066 TTTTTA
877 TCTTTA
* * *
15842072 AGGGGGTGTGAGTTCTCAAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACA
1 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * *
15842137 CCCATCGCACATCATGTGTGCACACCCCCACGGCCCCCCCGATTGCC-AGAACCCCAATGCCGAC
66 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGA-AACCCCAATGCCGCC
* * *
15842201 GATCAGGTTCTCCGGCGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
130 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
** * * *
15842266 AGCATGTGCTGCCGCAACCCTCAATCCGGTCCGATCTTAGACTGGGAATCAATTCCATATGCTTA
195 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
*
15842331 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCGGCCGGC
260 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * * * *
15842396 CAGAGGGGCGGGCTGCGTAAGCTGAGGATCGGCCGGATCCCCCTCTGCGTACTGTCGATCCTACT
325 CAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * * * *
15842461 ACCGTAACCCTCGATTCGGTCTGATCTTAGACTGGTAATGAACTCCGTATGCCTAAACCAACTGA
390 ACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * ** *
15842526 CGAAACGAGCGGGCGAAAGGGCGGGCATTACGCCGGCCAGAGAGGCGGGATGCGTAAGCGGA-GG
455 CGAAA-GA--GAGC----GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGC-CATGG
* * * * *
15842590 ATCGATAGCGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTACCATGCCAATTCGATTTTTC
512 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
*
15842655 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
577 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * * *
15842720 TTTTCTATTTTTTACGA-TTTTCAAAATGTTTTA-GGTTTCGGGATTTTTTAAATTTTTTTCAGA
642 TTTTCTATTTTTCATGATTTTTGAAACT-TTTTACGG-TTCGGGATTTTTTAAAATTTTTTCAGA
* * *
15842783 AGAAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTT-TTGGCATGCACAAAAAAA
705 AGGAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAA
* *
15842847 TTCAGCGAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAGA
769 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT-AGA
15842912 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
833 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * * *
15842962 AGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATGGGGGGCCAATATAAGGGCCAAGTGCCAACA
1 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * * * *
15843027 CCTATCGCACATCATGTGTGCAAACCCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCG
66 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCG
* *
15843092 GTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCA
131 GTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
* * * * *
15843157 ACATGTGCTGTCGCAACCCTCGGTCTGCTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
196 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * *
15843222 ACTAGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCAGCC
261 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * *
15843287 AGA-GGGCTGGCATGCGCAAGCCGGGGATCGGTTGGGTCCCCCTCTGCGTGCTACCAATCCTGCT
326 AGAGGGGC-GGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * * * *
15843351 ACCGCAACCTTC-AGTCCAGTCTGATCTTAAACTGGGAATGAGCTCCGTATGCCTAAGCCAATCG
390 ACCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * *
15843415 ACGAAACGA-A-CGGGCAGGCACTACACCGGCCAGAGAGGCGGGATGCACAAGCCGTGTATCGAT
454 ACGAAA-GAGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCCATGGATCGAT
* * * * *
15843478 AGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTTTGCCGTGTCAATACCATTTTTCTGGCTT
518 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
15843543 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
583 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * *
15843608 ATTTTCCATGATTTTTGAAACCTTTTACGGTTCGGGATTTTTTAAACTTTTTTCAGAAGGACTTT
648 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * * * * *
15843673 TGGCCCCAAACTTAATTGACGTGATCCTTGTGTTTTTGTTTGCATGCGCAAAATAATTCAGCTAA
713 TGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
*
15843738 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCGTTCTAGACACTTTAAT
778 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT-TAGACACTTTAAT
* *
15843803 GGCTACTGGCAACAAACCTGTAAAATCTGAAATGCTCTTTA
842 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * *
15843844 AGGGGGTGTGAGTTCACGAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAATTACCAGCA
1 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* *
15843909 CCCATCACACATCATGTGTGCACACCCCCCCGGCCACCCCTCCGATCGCCGAAACCCCAATGCCG
66 CCCATCGCACATCATGTGCGCACACCCCCCCGG-C-CCCC-CCGATCGCCGAAACCCCAATGCCG
** * * * **
15843974 TTGGTCAGGTTCTCCGGCGATGGTGTGCCGACAAAGAAAAATGTGGCACCAGCACATGCCCGAGC
128 CCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGC
* * * *
15844039 CCAGCATGTGCTGCCGTAACCCTCAGTCCGGTCCGATCTTAGACTGGAAATGAACTCTGTATGCT
193 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * *
15844104 TAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAAAGAACGTGCGGGTGCTCAGCCG
258 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * *
15844169 GCCAGAGGGGCGGGATGCACAAGCTGGGGACCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTG
323 GCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* **
15844234 CTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGTGAATGAACTTTGTATGCCTAAGCCAACC
388 CTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * *
15844299 GACGAAA-AGAGCGGGTGGGCACTACGCTGGCCAGAGAGGCGGCATGCACAAGCCATGGATCGAT
453 GACGAAAGAGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCCATGGATCGAT
* *
15844363 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTACTGCCATGCCAATGCCATTTTTCTAGCTT
518 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* *
15844428 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGTCAAGACGATTCGTTTTCT
583 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * **
15844493 ATTTTTCATGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCATACTGAGTTT
648 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * * * *
15844558 TGGCCCCAGACTTAATAGACGTGATCCTTGTCTTTTTGTTTGCATGCGCAAAAAAATTCAGCTAA
713 TGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
15844623 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCTAGACACTTTAAT
778 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT-TAGACACTTTAAT
* * *
15844688 GGCTACTGGTAGCAAACCTGTAAAATCTGAAATGCCCTTTA
842 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * *
15844729 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGCGGGCCAATATGAGGGCCAAGTACTAGCA
1 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
** * * *
15844794 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCATCGGAACCCCAAAGTCGCCG
66 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCG
* * **
15844859 GTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACTAGCACATGCCCTTGCCCA
131 GTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
** * *
15844924 AAATGTGCTGCCGCAACCCTCGATCCGGT-CGATCTTAGACTAGGAATGAACTCCGTATGCTTAG
196 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* *
15844988 ACTGGGAATGAACTCCGTATGACTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCC
261 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
** ** * * ** *
15845053 AGAGGGGCGGGATGCGCAAG-TCAAGGATCGAACGGGTCACCCTTTGCGTTTTG-CGATCTTGCT
326 AGAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * * * *
15845116 ACTGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGA
390 ACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * *
15845181 CGAAATGATCGGACGGCGGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGCCATAGAT
455 CGAAA-GA---GA--GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCCATGGAT
* *
15845246 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTGCCAATGCCATTTTTCT-
514 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTG
** *
15845310 TTTGTGTAAATTCAT-CTAATGGTCCCTTAAGCCTTCATGTGAATTTTCATGGCAAGACGACTCG
579 GCT-TGTAAATTCATAC-AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * *
15845374 ATTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTGCGGGATTTTTTTAAATTTTTTCAGAAG
642 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAG
** * **
15845439 GTTTTTTGGCCCCAAACTTTGTAGACGTGATCCTCCTATTTTTGTTGGCATGCA-AAAAAAACTT
707 GAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA-TT
15845503 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACA
771 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTAGACA
* *
15845568 CTTTAATGCCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTA
835 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
15845616 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCAAATATAAGGGCCAAGTACCAGCA
1 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * *
15845681 CCCATCGTACATCATGTGCGCACA-CCCCCCGG-CCCCCTGATCTCTCG-AACCCCAATACCTCC
66 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGC-CGAAACCCCAATGCCGCC
* * * * *
15845743 GGTCAAGTTCTGCGATGATGGTGTCCCGACGAAGAAAAATACGGCCCCAGCACATGCCTGAGCCC
130 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
* ** **
15845808 AGCATGTGCTACCGCAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTTTGTATGCTTA
195 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * ***
15845873 GACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAATTGGC
260 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * *
15845938 CAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGCGCTGCTGATCCTGTT
325 CAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * * * * *
15846003 ACCACAACCGTC-AGTCCGGTCTGATCTTAGACTGGGAATGAATTTCGTATGCCTAAGTCAACCC
390 ACCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* ** *
15846067 ACGAAA-TGAGCATGCGGGCACT-CGACCGGCCAGAGGGGCGGGATGC
454 ACGAAAGAGAGCGGGCGGGCACTACG-CCGGCCAGAGAGGCGGGATGC
15846113 GAAAGTCGGG
Statistics
Matches: 3558, Mismatches: 437, Indels: 126
0.86 0.11 0.03
Matches are distributed among these distances:
879 2 0.00
880 102 0.03
881 134 0.04
882 549 0.15
883 16 0.00
884 6 0.00
885 886 0.25
886 160 0.04
887 517 0.15
888 2 0.00
889 16 0.00
890 843 0.24
891 5 0.00
892 1 0.00
893 1 0.00
894 1 0.00
895 2 0.00
897 2 0.00
900 1 0.00
901 2 0.00
905 3 0.00
908 1 0.00
912 1 0.00
913 204 0.06
914 101 0.03
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (882 bp):
AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCG
GTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
AGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTA
CCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
GAAAGAGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCCATGGATCGATAGG
GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
CCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAGACACTTTAATGGCT
ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
Found at i:15844986 original size:26 final size:26
Alignment explanation
Indices: 15844957--15845008 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15844947 TCCGGTCGAT
15844957 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15844983 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15845009 ACTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15845879 original size:26 final size:26
Alignment explanation
Indices: 15845843--15845895 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15845833 CTAGTCCGAT
*
15845843 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15845869 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15845895 C
1 C
15845896 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15846243 original size:159 final size:159
Alignment explanation
Indices: 15845869--15846244 Score: 488
Period size: 159 Copynumber: 2.4 Consensus size: 159
15845859 ACTTTGTATG
*
15845869 CTTAGACTGGGAATGAAC-TCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAA
1 CTTAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAA
** * * * *
15845933 TTGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGCGCTGCTGATC
65 CCGGCCAAAGGGGCGGGATGCGAAAGCCGGGGATCGATCGGGTACCCCACTGCACGCTGCTGATC
* * * *
15845998 CTGTTACCACAACCGTCAGTCCGGTCTGAT
130 CTGCTACCACAACCCTCAGTCCAGTCTGAC
* * * * *
15846028 CTTAGACTGGGAATGAATTTCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCACTCGAC
1 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAAC
* * * *
15846093 CGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATCGATCGGGTACCCCACTGCATGCTG-TCGATG
66 CGGCCAAAGGGGCGGGATGCGAAAGCCGGGGATCGATCGGGTACCCCACTGCACGCTGCT-GATC
*
15846157 CTGCTA-CAGCAACCCTCGGTCCAGTCTGAC
130 CTGCTACCA-CAACCCTCAGTCCAGTCTGAC
* * *
15846187 CTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGC
1 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGC
15846245 GGGCATTACG
Statistics
Matches: 186, Mismatches: 28, Indels: 6
0.85 0.13 0.03
Matches are distributed among these distances:
158 3 0.02
159 181 0.97
160 2 0.01
ACGTcount: A:0.23, C:0.28, G:0.30, T:0.19
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAAC
CGGCCAAAGGGGCGGGATGCGAAAGCCGGGGATCGATCGGGTACCCCACTGCACGCTGCTGATCC
TGCTACCACAACCCTCAGTCCAGTCTGAC
Found at i:15846924 original size:26 final size:26
Alignment explanation
Indices: 15846886--15846938 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15846876 CTGGTCCGAT
* *
15846886 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
15846912 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
15846938 C
1 C
15846939 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCTGTATG
Found at i:15847286 original size:159 final size:159
Alignment explanation
Indices: 15846912--15847286 Score: 502
Period size: 159 Copynumber: 2.4 Consensus size: 159
15846902 ACTTTGTATG
* *
15846912 CTTAGACTAGGAATGAAC-TCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAA
1 CTTAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAA
* * * ** * *
15846976 TCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGAGTCCCCTTCTGCGTGCTGTTGATC
65 CCGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATCGACCGAGTCCCCCACTACGTGCTGTCGATC
*
15847041 CTGTTACCACAACCCTCAGTCCGGTCTGAT
130 CTGCTACCACAACCCTCAGTCCGGTCTGAT
* ** * **
15847071 CTTAGACTGGGAAT-AAATTCCGTATGCCTAAGTCAACCCACAAAACGAGCATGCGGGCACTTGA
1 CTTAGACTGGGAATGAACTT-CGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAA
*
15847135 CCGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATCGACCGGGTCCCCCACTACGTGCTGTCGATC
65 CCGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATCGACCGAGTCCCCCACTACGTGCTGTCGATC
* * *
15847200 CTGCTATCGCAACCCTCGGTCCGGTCTGAT
130 CTGCTACCACAACCCTCAGTCCGGTCTGAT
* * * *
15847230 CTTAGACTGGGAATGAACTTCGTATACCTAAGCCAACCGATGAAACGAGCGGGCGGG
1 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGG
15847287 TGGGCGGGCG
Statistics
Matches: 185, Mismatches: 28, Indels: 6
0.84 0.13 0.03
Matches are distributed among these distances:
158 2 0.01
159 178 0.96
160 5 0.03
ACGTcount: A:0.23, C:0.28, G:0.29, T:0.20
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAAC
CGGCCAGAGGGGCGGGATGCGAAAGTCGGGGATCGACCGAGTCCCCCACTACGTGCTGTCGATCC
TGCTACCACAACCCTCAGTCCGGTCTGAT
Found at i:15847967 original size:26 final size:26
Alignment explanation
Indices: 15847938--15847990 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15847928 CCGGTCTGAT
* *
15847938 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
15847964 CTTAGACTGGGAATAAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
15847990 C
1 C
15847991 CTAAGTAACC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:15848539 original size:468 final size:468
Alignment explanation
Indices: 15847656--15848566 Score: 1276
Period size: 468 Copynumber: 1.9 Consensus size: 468
15847646 TCCCCATTTC
* *
15847656 AGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAACAAACATGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15847721 TTCTCGAGGTTTGATGAGGGATAGTTGGCCAATATAAGGGCCAAGTACAAGCACCCATCACACAT
66 TTCTCGAGGTTTGATGAGGGATAGTGGGCCAATATAAGGGCCAAGTACAAGCACCCATCACACAT
* *
15847786 CATGTACGCACACCCCCCACCCCCCCTCGATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCT
131 CATGTACGCACACCCCCCACCACCCCTCGATCGTCGAAACCCCAATGCCACCGATCAGGTTCTCT
** *
15847851 GGGGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCC
196 GACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * **
15847916 GCAACCCTCGGTCCGGTCTGATCTTAGACTGTGAATGAACTCCGTATGCTTAGACTGGGAATAAA
261 GCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTCAGAATAAA
** * * * * *
15847981 CTTCGTATGCCTAAGTAACCCATGAGACGAACGTGCGGGTGCTCAGCCGGCGAGAGCGGCGGGAT
326 CCCCATATGCCTAAGTAACCCATGAAACGAACGTGCAGGTGCTCAACCGGCGAGAGCGGCGAGAT
** * *
15848046 GCGTAAGCCGGGGATCGTCCGGGTCCCTCACTGTGTGCTGTCGATCCTGCTACTGCAACCTCGGT
391 GCACAAGCCGGGGATCGTCCGGGTCCCCCACTGCGTGCTGTCGATCCTGCTACTGCAACCTCGGT
15848111 CTGGTCTGATCTT
456 CTGGTCTGATCTT
* *
15848124 AGACACTTTAATGGCTACTGG-AAGCAAACATGTAAAATCTCAAATGGTCTTTAAGGGGTTGTGA
1 AGACACTTTAATGGCTACTGGCAA-CAAACATGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * **
15848188 GTTCTTGAGGTTTGATGAGGGATAG-GGGCCCAATATAAGGGCCAAGTACCAGCACCCATTGCAC
65 GTTCTCGAGGTTTGATGAGGGATAGTGGG-CCAATATAAGGGCCAAGTACAAGCACCCATCACAC
* * * * * *
15848252 ATCATGTGCGCACACCCCCC-CGATCCCTCGATCGTCGAAACCCTAATGCCGCCGGTCAGGTTCT
129 ATCATGTACGCACACCCCCCACCACCCCTCGATCGTCGAAACCCCAATGCCACCGATCAGGTTCT
* **
15848316 AC-GACGATGGTGTCTCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
194 -CTGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
** *
15848380 GCC-CTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTTTGTATGCTTAGATTCAGAA
258 GCCGC-AACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTCAGAA
* * * * * *
15848444 TGAACCCCATATGCCTAAGTCAACCCATGAAACGAGCGTGTAGGTGCTCAACCGGCTAGAGGGGT
322 TAAACCCCATATGCCTAAGT-AACCCATGAAACGAACGTGCAGGTGCTCAACCGGCGAGAGCGGC
* *
15848509 GAGATGCACAAGCCGGGGATCGGT-CGGGTCCCCCTCTGCGTGCTGTTGATCCTGCTAC
386 GAGATGCACAAGCCGGGGATC-GTCCGGGTCCCCCACTGCGTGCTGTCGATCCTGCTAC
15848567 CACAACCCTC
Statistics
Matches: 387, Mismatches: 50, Indels: 12
0.86 0.11 0.03
Matches are distributed among these distances:
466 1 0.00
467 167 0.43
468 217 0.56
469 2 0.01
ACGTcount: A:0.24, C:0.27, G:0.26, T:0.22
Consensus pattern (468 bp):
AGACACTTTAATGGCTACTGGCAACAAACATGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
TTCTCGAGGTTTGATGAGGGATAGTGGGCCAATATAAGGGCCAAGTACAAGCACCCATCACACAT
CATGTACGCACACCCCCCACCACCCCTCGATCGTCGAAACCCCAATGCCACCGATCAGGTTCTCT
GACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
GCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTCAGAATAAA
CCCCATATGCCTAAGTAACCCATGAAACGAACGTGCAGGTGCTCAACCGGCGAGAGCGGCGAGAT
GCACAAGCCGGGGATCGTCCGGGTCCCCCACTGCGTGCTGTCGATCCTGCTACTGCAACCTCGGT
CTGGTCTGATCTT
Found at i:15850017 original size:892 final size:888
Alignment explanation
Indices: 15848124--15862593 Score: 18481
Period size: 892 Copynumber: 16.4 Consensus size: 888
15848114 GTCTGATCTT
* * * *
15848124 AGACACTTTAATGGCTACTGGAAGCAAACATGTAAAATCTCAAATGGTCTTTAAGGGGTTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
15848189 TTCTTGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATTGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * * *
15848254 CATGTGCGCACACCCCCCCGA-TCCCTCGATCGTCGAAACCCTAATGCCGCCGGTCAGGTTCTAC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* *
15848318 GACGATGGTGTCTCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
196 GACGATGGTGTC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCC
* * * **
15848383 -CTAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTTTGTATGCTTAGATTCAGAATGA
260 GC-AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
* * * ** * * * * *
15848447 ACCCCATATGCCTAAGTCAACCCATGAAACGAGCGTGTAGGTGCTCAACCGGCTAGAGGGGTGAG
324 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* ** * * *
15848512 ATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTTGATCCTGCTACCACAACCCTC
389 ATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTC
** * * ** * * *
15848577 AATCTGATCCAATCTTAGAATCGGAATGAACTCCGTATGCCTAAGCCAACGGACGAAACGA----
453 GGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * * * ** *
15848638 ----GCGAGTGGGCATTACGCCGACCAGAGAGGCAAGATGCGCAAGCCGTGGATTGATCA-GGTG
518 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT-AGGGTG
* **
15848698 GTAGGTGGGTTTAGGCATATCTTCATATTTCTACCATGTTAATGCCATTTTTCTGGCTTGTAAAT
582 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAAT
* *
15848763 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATAGCAAGACGACTCATTTTCTATTTTT
647 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
** *
15848828 CATGATTTTTTAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGGTA-GAGTTTTGGCC
712 CATGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA-GAAGGAGTTTTGGCC
* * * *
15848892 CCAAACTTGGTAGACGTGATCATTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAATT
776 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
15848957 TGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTC
841 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
15849005 AGACACTTTAATGTCTACTGGCAGTAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGAGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15849070 TTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * *
15849135 CATGTGCGCACACCCGCCGCCCCGACCCCACCGATCGTTGGAACCCCAATACCGTCAGTCAGGTT
131 CATGTGCGCACA--C-CC-CCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* * *
15849200 CTCCGACGTTGGTGTTCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGGACAGCATGTGC
192 CTCCGACGATGGTG-TCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGC
* * * *
15849265 TGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACT-TATATGCTTAGATTGGGAA
256 TGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
* * ** *
15849329 TGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGCCAACCAAAGGGGC
321 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * *
15849394 GGGATGCGCAAGCCAGGGATCTG-TCGGGTCCCCGTCTACGTGCTGTCGATCTTGCTGCCCCAAC
386 GGGATGCGCAAGCCGGGGATC-GACCGGGTCCCC-TCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* *
15849458 CCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA
449 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* **
15849523 GCGGGCGGGCGGGCGAGCACTACGCCGTTCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
514 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* *
15849588 GTGGTAGGTGGGTTTAGGCACATCTTCATAGTTT-TGCCATGCCAATGCCATTTTTTTGGCTTGT
579 GTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCTACCATGCCAATGCCATTTTTCTGGCTTGT
* * * * *
15849652 AAATTCATACAATCGTCTCTTAAGCCTTCATGTGAAGTTTCATGGAAAGACGATTCGTTTTTTAT
643 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
15849717 TTTTCACGATTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAAGTTTTTCAGAAGGAGTTTT-
708 TTTTCATGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* * *
15849781 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAACTAAAA
773 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * *
15849846 ACTCGAAGTGTAGAAGATTTTGTGCCCATTTGAAAAAAGTGTCCTCATTTC
838 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
15849897 CGACACTTTAATGGCTACTGACAGCAAACCTATAAAATCTCAAACGCTCTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15849962 TTCTCAAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * ** * * *
15850027 CATGTGCGCACACCCCCCTGGCCCCTCCGATCATCGAAACCTCAATACCGTCGGTCAGGTTCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * * *
15850092 GACGATGGTGTCCCAGCGAAGAAAAATGCGGCACCAACACATGCCCGAGGATAGCATGTGCTACC
196 GACGATGGTGTCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCC
* *
15850157 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAAGAACTCCGTATGCTTAGACTGGGAATGAA
260 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
* * *
15850222 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAACCGGCCAGAGGGGCGGGA
325 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * ** * * *
15850287 TACGCAAGCTGGGGATCGGTCGGGTCTCCCTCTGCGTGCTATCGATCCTGCTACCGCAACCCTCA
390 TGCGCAAGCCGGGGATCGACCGGGTC-CCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
* * * * * *
15850352 ATCCGATCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGA
454 GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
** * ** * *
15850417 CGGGCGGGCAAGCACTACACCGGTTAGAGAGGCGGGATGCGAAAGCCATGGATCGATAGGGTGCG
519 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTG-G
15850482 -AGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTTGTAAAT
583 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGC-TTGTAAAT
15850546 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
647 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
** * ** *
15850611 CATGATTTTTG-AAAC-TTTTAGCGGTTCGAGATTTTTTTAAAACCTTTTCAAAATTAGTTTTGT
712 CATGA-TTTTGAAAACTTTTTA-CGGTTCGAGA-TTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * *
15850674 CCCCAAACTTGGCAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTGAGCTAAAAA
774 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
15850739 CTTGAAATGTACAAGA-TTT-T-A-C-------------G-----A---C
839 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15850764 ---CA-TTTAATGTCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
15850825 TTCTCGAGGTTTGATGAGGGATATGGAGCCAATATAAGGGCGAAGTACCAGCACCCATTGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
15850890 CATGTGCGCACACCCGCCGCCCCGACCCCCCCGATCGCCAGAACCCCAATACCGTCGGTCAGGTT
131 CATGTGCGCACA--C-CC-CCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* *** * * **
15850955 CTTCGGTAATGGTGTCCCGGCGAAGAAAAATACGGCACCAAAACATGCCCGAGC-CTAGCATGTG
192 CTCCGACGATGGTGT-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCAC-AGCATGTG
* * * * * **
15851019 CTGCCGTAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTAAGATTCAGA
255 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGA
* * * * *
15851084 ATGAACCCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTCAACCGGCCAAAGGGG
320 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * *
15851149 CGAGATGCACAAGCCGGTGATCGACCGGGTCCCCCTTTGCGTGCTGTCGATCCTGCTGCCACAAC
385 CGGGATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* * ** * * *
15851214 CTTCGATTTGATCTGATCTTAGAATGGGAATGAACTCCGTATGCCTAAGCCAACGGACGAAACGA
449 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * **
15851279 GCGAGCAGGCGAGCGGGCACTACGCCGGCCAGAGAGGCAAGATGCGCAAGCCGTGGATCGATCA-
514 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT-AG
*
15851343 GGTGGTAGGTGGGTTTAGGCATATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGT
578 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGT
*
15851408 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTAT
643 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
** *
15851473 TTTTCATGATTTTTTAAACTTTTTACGGTTCTG-GATTTTTTAAAATTTTTTCAGGTA-GAGTTT
708 TTTTCATGATTTTGAAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCA-GAAGGAGTTT
* *
15851536 TTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTCAGCTAA
771 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* *
15851601 AAACTCGAAGTGTTCAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTC
836 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15851654 AGACACTTTAATGTCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGAGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15851719 TTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
15851784 CATGTGCGCACACCCGCCGCCCCGACCCCCCCGATCGTCAGAACCCCAATACCGTCGGTC-GGTT
131 CATGTGCGCACA--C-CC-CCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* * * * * * * *
15851848 CTCTGGCAATGGTGTCCCGACGGAGAAAAATGCAGCACCAGCACATGCCCTAGGATAGCATGTGC
192 CTCCGACGATGGTGT-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGC
* *
15851913 TGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC-ATATGCTTAGACTGGGAA
256 TGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
* *
15851977 TGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGC
321 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * *
15852042 GAGATGCGCAAACCGGGGATCTG-TCGGGTCCTCCTCTGCGTGCTGCCGATCCTGCTACCCCAAC
386 GGGATGCGCAAGCCGGGGATC-GACCGGGTCC-CCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* ** ** * ** *
15852106 CCTCAGTCTAGTCCAATCTTAGGCTGGGAATGAACTTTGTATGCCTAAGCCAACCGACGAAATGA
449 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * **
15852171 GCGGGCTGGCGGGCGAGCACTATGCCGTTCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
514 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * * *
15852236 GTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTATCGTGCCAATGCCATTTTTTTGGCTTGTA
579 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTA
* * * *
15852301 AATTCATACAATTGTCTCTTAAGCCTTCATGTGAAGTTTCATGGAAAGACGACTTGTTTTCTATT
644 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * ** *
15852366 TTTCACGATTTTCAAAACTTTTTACAATTTGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
709 TTTCATGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
*
15852431 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAA
774 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
15852496 CTCGAAGTGTAGAAGATTTTGTGACCATGTGAAAAAAGTGTCCCCATTTTC
839 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTC
* *
15852547 -GACACTTTAATGGCTACTGGCAGCAAACCTTTAAAATCTCAAATGCTCTTTAAGGCGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15852611 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
15852676 CATGTGCGCACA-CCCCCCGA-----TC-AT---CGAAACCTCAATACCGTTGGTCAAGTTCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * *
15852731 GACGATGGTGTCTCGGCGAAGAAAAATGCGACACCAGCACATGCCCGAAG-ACAGCATGTGTTGC
196 GACGATGGTGTC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCG-AGCACAGCATGTGCTGC
* * * ** **
15852795 CGCAACCTTTGGTCCAGTTTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGA
259 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
* * * *
15852860 ACTCCATATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGCACTCAGCCGGCCAGAGGGGTGGG
324 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* ** ** * *
15852925 ATGCGCAAGCCGGGGATCGATCGGGTCCCCTTCTGCCAGCTACCGATCTTGCTCCCGCAACCCTC
389 ATGCGCAAGCCGGGGATCGACCGGGTCCCC-TCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTC
* * * * * *
15852990 GGTCTGATCTTATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCAG
453 GGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * ** ** *
15853055 GCGGGGCGGGCGGGCGCTACGTCGGTTAGAGAGGCGGGATGCGCAAGTTGTAGATCGATAGGGTG
518 GC-GGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTG
* *
15853120 GTTGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTTGTAAA
582 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGC-TTGTAAA
* *
15853185 TTCATACAATGGTCCCTTAAGCCTTCATCTGAAGTTTCATGGGAAGACGACTCGTTTTCTATTTT
646 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
15853250 TCATGATTTTTG-AAACTTTTTACGGTTCGAGATTTTTTTAAAATTTTTTCAGAAGTG-GTTTTG
711 TCATGA-TTTTGAAAACTTTTTACGGTTCGAGA-TTTTTTAAAATTTTTTCAGAAG-GAGTTTTG
15853313 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
773 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
15853378 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
838 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * * *
15853429 AAACACTTTAATGTCTACTAGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15853494 TTCTCGAGGTTTGATGAGGGATATGGGGTCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
15853559 CATCTGCGCATGC-CTGCCCCCCGACCCCCCCGATCGCCGGAACCCCAATACAGTCGGTTAGATT
131 CATGTGCGCA--CAC--CCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* ** * *
15853623 CTCCGACAATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCTCGAGGACAGCATGTGC
192 CTCCGACGATGGTGT-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGC
* ** *
15853688 TGCTGCAACCCTCGGTCCATTCCGATCTTAGACTGGGAATGAACTC-GTATGCTTAGACTAGGAA
256 TGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAA
* *
15853752 TGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAGC
321 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * ** * * * *
15853817 GAGATTCGCAAGTCGGGGATCTACCAAGTCCCCCACTGCATGCTG-CTGATCCTACTGCCCCAAC
386 GGGATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAAC
* ** * *
15853881 CCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACAAAACGA
449 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
15853946 GCAGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
514 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
*
15854011 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCAAGCCAATGCCATTTTTCTGGCTTGTA
579 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTA
*
15854076 AATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
644 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * *
15854141 TTTCATGATTTTGGAAACTTTTTACGGTTCGATATTTTTGAAAATTTTTTCAGATGGAGTTTTGG
709 TTTCATGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
** * *
15854206 CCCCAAACTTGGTAGAAATGATCCTTGTATTTTT-TTGGGCATGCCCAAAAATATTCAGCTAAAA
774 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAA
* *
15854270 ACTTGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTTC
838 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15854321 AGACACTTCAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGAGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
15854386 TTCTCAAGATTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
15854451 CATGTGCGCACACCCCCCCGA-CCCCCCGATCGTCGGAGCCCCAATACCGTTGGTCAGGTTCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * * *
15854515 GACGATGGTGTCCTAGCGAAGAAAACTACAGCACCAGCACATGCCCGAGC-CTAGCATGTGCTGT
196 GACGATGGTGTCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCAC-AGCATGTGCTGC
* * *
15854579 CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGATTGGG-ATGA
259 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
* * * * * *
15854643 ACTCCGTATGCCTAAGTCAACCCACGAAACAAGAGTGCAGGCGCTCAGCGGGCTAGAAGGGCGGG
324 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * *
15854708 ATGCGTAACCCGGGGATCGCCCGGGT-CCCTCT-C-TGC-GT-G---CTG-T--CGTAACCCTCG
389 ATGCGCAAGCCGGGGATCGACCGGGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
* ** * * *
15854762 ATCTAGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGAGGA
454 GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
** *
15854827 CGGGCGGGCGGGCACTACGCCTACCAGAGATGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
519 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* *
15854892 AGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATATTTT-TGGCTTGTAAATT
584 AGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAT-TTTTCTGGCTTGTAAATT
* * *
15854956 CATACAATGGTCCCTTAAGCCTTCATGCGAAGTTTCTTGGCAAGACTACTCGTTTTCTATTTTTC
648 CATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * *
15855021 ATGATATTTGAAAA-TTTTTACAGTTCGGGATTTTTTAAATTTTTTTCAGAAGGAGTTTTGGCCC
713 ATGAT-TTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCC
*
15855085 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATC
777 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
15855150 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTCC
842 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15855197 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAATTCTCAAATGCTCTTTAAGGGGGTTTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15855262 TTATCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
15855327 CATGTGCGCACACCTCCCCCGGCCCCCCCGATCGCCGGAATCCCAATGTCGTCGGTCAGGTTCTC
131 CATGTGCGCACACC-CCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * *
15855392 CGACGATGGTGTCTCGACAAAAAAAAATACGGCTCCAGCATATGCCCGAGCCCAGCATGTGCTGC
195 CGACGATGGTGTC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGC
* ** * *
15855457 CGCAACCCTCGGTCTGGTATGATCTTAGACT-GGAATGAACTCCGTATGCTTAGACTAGGAATGA
259 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
* * * *
15855521 ACTTCGCATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCAGG
324 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
** * * * * * *
15855586 ATGCATAAGTCGAGGATCGACCGGGTACCCCTTTGCGTGCTGCCAATCCTGTTGCCGCAACCCTC
389 ATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTC
* * * ** * * * * *
15855651 GGTTCGGTCTGATCTTAGATTGGGAATTAACTATGTATGCCTAAACCAATCGATGAAAGGAGCGA
453 GGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * * *
15855716 GCGGGCGGGCGGGTACTATGCCGGCCAGAGAGGTGGGATGCGCAAGCCGTGGATTGATAGGGTGG
518 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGG
15855781 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATT
583 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATT
* * *
15855846 CATACAATGGTCCCTTAAGCCTTCATGAGAAGTTTCACGGCAAGATGACTCGTTTTCTATTTTTC
648 CATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * *
15855911 ATGATTTTTG-AAACTATTT--GGATTTGGGA-TTTTT-AAATATTTTTCTGAAGGAGTTTTGGC
713 ATGA-TTTTGAAAACTTTTTACGG-TTCGAGATTTTTTAAAAT-TTTTTCAGAAGGAGTTTTGGC
* *
15855971 CCTAAACTTGGTAGACGTGATTCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
775 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* *
15856036 TCGAAGTGTACAAGATTCTGTGACCATTTGAAAAAAGTGTCCCCATTTA
840 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15856085 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTTTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
15856150 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
15856215 CATGTGCGCACACACCCCCGGCCCCCCAGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * ** * * * * * *
15856280 GGCGATTGTGTCTTTACAAAGAAAAATGCAGCACCAGCAAATGCCTGAGCCCAGCATGTGCTGTC
196 GACGATGGTGTC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCC
* * * * *
15856345 GCAACCCTCGATGCC-CTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAGACTGGGAATGA
260 GCAACCCTCGGT-CCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
* * * * **
15856409 ACTTCGTATGCCTAAGTCAATCCACGAAACGAGCGTACGGGCGCTTAGCCGATC-GAGGGGCGGG
324 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
** * * ** * * * *
15856473 ATGCGCAAGCCGGGGATCGATTGGATCCCCCTTTATGTGTTGCCGATCCTGCTGCTGCAACCCTT
389 ATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTC
* ** * *
15856538 AGTCCGGTCTGATCTTAGACTGTTAATGAACTCCGTATGCCTAAGCCAACTGACGAAATGAGCGG
453 GGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--
*
15856603 GCAGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
516 G--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
*
15856668 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
579 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTA
* * *
15856733 AATTCATACAATGGTCCGTTAAGCCTTCATCTGAAGTTTCATGGGAAGACGACTCGTTTTCTATT
644 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * * *
15856798 TTCCATGATTTTCAAAACTTTCTATGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGAGTTTTGG
709 TTTCATGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
** * * *
15856863 CCCCAAACTTGGTAGACGTGATCCTTACATTTTTGTTGGCATGCACAAAAACATTCAACTAAAAT
774 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * * *
15856928 GTTGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTACCCATTTC
839 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15856978 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACACTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15857043 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGAACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
15857108 CATGTGCGAACACCCCCCCGACCCCCCCGATCGTC-GAAACCCAATGCTGCCGGTCAGGTTCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* ** * * *
15857172 GATGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTG-C
196 GACGATGGTGT-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCC
* * ** * *
15857236 GTAACCCTCAGTCCGGTCAAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGAGAATGAA
260 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
* * * * *
15857301 CTCCGTATACCTAAGTCAACCCATGAAACGAGCGTTCGGGCGCTCAGCCGGCTAGAGGTGCGGGA
325 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * * * * *
15857366 TGCGCAAGTCGGGGATCGGCTGGGTCCCCCTCTGCTTGCTGTCGATCCTACTGTCGCAACCCTCT
390 TGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
* * * * * *
15857431 ATCTGATCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGCGGG
454 GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
*
15857496 CGGGCGGGCGGGCACTACGCCGGTCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
519 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
15857561 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
584 AGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
* * *
15857626 ATACAATGGTCCCTTAAGCGTTCATGTGAAGTTTCATGGCAA-A-GACTCGTTTTTTATTTTTCC
649 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * * *
15857689 CGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGTGTTTTGGGCCCA
714 TGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
*
15857754 AACTTGGTAGACGTGATCCTTGTATTTTTGGTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
779 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
15857819 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
844 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15857864 AGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
15857929 TTCTTGAGGTTTGATCAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * * *
15857994 CATGTGCGCACACCCCCCCGGCCCCCCCGGATCGCCCAAACGCCAATGCGGCCGGTCAGGTTCTC
131 CATGTGCGCACACCCCCCCGACCCCCCC-GATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
** * * *
15858059 CGGTGATGGTGTCCTGGCGAAGAAAAATGCGGCACCAGCACTTGCCCGAGCCCAGCATGTGCTGC
195 CGACGATGGTGTCC-GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGC
* *
15858124 CGCAA----C---CC--T-CGA---T---CT----A-G---TCTG-AT-CTTAAATTGGGAATGA
259 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
* *
15858163 ACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGG-GGG
324 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * *
15858227 AATGCACAAGCCGGGGATCGACCGGGTCCCCTTCTGC-TAGCTGTCGATCCTACTACAGCAACCC
389 -ATGCGCAAGCCGGGGATCGACCGGGTCCCC-TCTGCGT-GCTGTCGATCCTGCTGCCGCAACCC
* * * *
15858291 TTGGTCCGGTCTGATCTTAGACTAGGAATGAACTCC-TATGCCTAAGCAAACCGACGAAATGAGC
451 TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * ** *
15858355 GGGC-GGC---CGGGCACTACGTCGACCAGAGAGGTAGGATGCGCAAGTCGTGGATCGATAGGGT
516 GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
* * *
15858416 GGTAGGTGGGTTTAGGCGCATCTTCATATTTCTACCGTACCAATGCCATTTTTCTGGCTTGTAAA
581 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAA
**
15858481 TTCATACAATCATCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
646 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * * *
15858546 TCACGCTTTTCGAATA-TTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAGGGAGTTTTGGC
711 TCATGATTTT-GAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
** * * * *
15858610 AACAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCTTGCACCAAAAATTTCAGCTAAAAAC
775 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
*
15858675 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTC
840 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15858724 AGACACTTTAATGGCAACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15858789 TTCTCGAGGTTTGATGAGGGATAGTGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** * * *
15858854 CATGTGCGCACACCCCTCAG-CCCCCCC-ATCGCCTTAACCTCAATGCCGCCGGTCAGATTCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
** * * * **
15858917 GACGATGGTGTCCCGGTGAAGAAAAGTGCGGCGCTAGCACATGCCCGAGCTTAGCATGTGCTGCC
196 GACGATGGTGT-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCC
* * * * * * * *
15858982 GTAACCCTCGGTCCTGTCTGTTCTTATACTGAGAATGAAAT-TCGTATGCTTAGACTAGGAATGA
260 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCT-GTATGCTTAGACTGGGAATGA
* * * *
15859046 ACTCTGTATACCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGA
324 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * **
15859111 ATGCGCAAGTCGGGGATCGACCGGGTCCCCCCTCTACATGCTGCCGATCCTGCTGTAGCAACCCT
389 ATGCGCAAGCCGGGGATCGACCGGGT--CCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCT
* ** * * * * *
15859176 TGGTCCGGTCCAATCTTAAACTGGGAATGAACTCCGTAAGCCTAAGCCAACTGATGAAATGAGCG
452 CGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG
* * * *
15859241 GGCGGGAGGGCGGGCACTAAGCCGGCCAGAGAGGCGGGATGCTCAGGCCGTGGATCGATAGGGTG
517 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTG
* *
15859306 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAAT
582 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAAT
*
15859371 TCATACAATGGTCCCTTAAGCCGTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
647 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
*
15859436 CATGATTTTTG-AAACTTTTTACGGTTCGAGATTTTTTAAATTTTTTTCAGAAGGAGTTTTGGCC
712 CATGA-TTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCC
* * * * *
15859500 CCAAACTTGGTAGATGTGATCCTTGTAATTTTGATGCCATGCACAAAACAATTCAGCTAAAAACT
776 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
*
15859565 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTC
841 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15859613 AAACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15859678 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
**
15859743 CATGTGCGCACACCCCCCCCG-CCCCCCTAATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
131 CATGTGCGCACA-CCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * *
15859807 CGACGATGGTGTCTCGACGAAGAAAAATGCGACACTACCACATGCCCGAGGATAGCATGTGCTGC
195 CGACGATGGTGTC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGC
* ** *
15859872 CGTAACCCTCGGTCCAATCCGATCTTAGACTGGGAATGAACT-TCGTTTGCTTAGACTGGGAATG
259 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCT-GTATGCTTAGACTGGGAATG
*
15859936 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGG
323 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
* * *
15860001 GATGCGCAAGCCAGGGATCGATCGGAT--CC-CT-C-T-CTG-C-A---TGCTGCCGCAACCCTC
388 GATGCGCAAGCCGGGGATCGACCGGGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTC
* * * *
15860055 GGTCCGGTGTGATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCTAACCGAGGAAACGA----
453 GGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * * * * *
15860116 ----GCGTGCGGGCACTACGTCGACTAGAGAGGTGGGATGCGCAAGCCGTGGATTGATAGGGTGG
518 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* *
15860177 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTTTAAATT
583 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATT
* *
15860242 CATACAATGGTCCCTTAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
648 CATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * * **
15860307 ACGATTTTTG-AAACTTTTTACGGTTCAAGATTTTTTATAATTTTTTTAAAAGGGGTTTTGGAAC
713 ATGA-TTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCC
* *
15860371 CAAACTTGGTAGACATGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTC
777 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
*
15860436 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCATTTC
842 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15860483 AGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTAAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15860548 TTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
15860613 CATGTGCGTACA-CCCCCCGTCCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTCGGGTTCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * *
15860677 GACGATGGTGTCCAGACGAAGAAAAATGCAGCACCAGCAAATGCCCAAGCCCAGCATGTGCTGCC
196 GACGATGGTGTCC-GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCC
*
15860742 GCAA----C---CC--TCAG-TC-----C-----A-G---TCTG-AT-CTTAGACTGGGAATGAA
260 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
* * *
15860781 CTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGTTCAGCCGGCCAGAGGGGCGGGA
325 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * *
15860846 TGTGCAAGCTGGGGATCGGA-CGGGT-CCC-C--C-T-CTG-C-ATGCT-CT--CGTAACCCTCG
390 TGCGCAAGCCGGGGATC-GACCGGGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
* * * * * *
15860899 GTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCTAACCAATGAAACGA----G
454 GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
* *** *
15860960 CGGGCGGGCGGGCACTACGCCAGCCAGAGAGGCAACATGCGCAAGCCGTGGATCAATAGGGTGGT
519 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* ** *
15861025 AGGTGGGTTTAGGCACATCTTCATATTTTTGTCATGCCGATGCCATTTTTCTGGCTTGTAAATTC
584 AGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
* *
15861090 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCACGACGACTTGTTTTCTATTTTTCA
649 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * ** ***
15861155 CGATTTTCAAAACTTTTTAGGGTTTC-AGATTTTTTAAAATTTTTTCAAAAAAAGTTTTGGCAGA
714 TGATTTTGAAAACTTTTTACGG-TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCC
* * * * *
15861219 AAACTTGGTAGACTTGATCCTTGTATTTTTTTTTGCATGCACAAAAAAATTCAGCTAAAACCTCT
778 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* * *
15861284 AAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTT
843 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15861330 AGACACTTTAATGGGTACTGGCAGCAAACCTGTAAAATCTCAAATGATCTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15861395 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGAACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
** * * * * *
15861460 CATGTGCATACACCCCCCCGCAGCCCCCCTGATTGCCGGAACCCCAATGTCGCCGATCAGGTTCT
131 CATGTGCGCACACCCCCCCG-A-CCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * *
15861525 CCGACGATGGTGTCTCGATGAAGAAAAATACGGCACCAGCACATGCCTGAGCACAGCATGTGCTG
194 CCGACGATGGTGTC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTG
* * * * *
15861590 CCGTAACCCTCGGTCTGGTCCGATCTTAGACTGGGAGTCAACTCTGTATGCTTTGACTGGGAATG
258 CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATG
* ** * * *
15861655 AACTCTGTATGCCTAAGTCAACCCACGAAACGAGTTTACGGGCGCTCAGCCGGCCAGAGGGACAG
323 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
* * ** * *
15861720 GATGCGCAAGTCGGGGATC-AGCCGGGTCCTCCTCTGTGTGCTACCGATCCTGCTACGGCAACCC
388 GATGCGCAAGCCGGGGATCGA-CCGGGTCC-CCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCC
** * * * *
15861784 T-GGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGGCTAAGGCAACCGACGAAATGAGC
451 TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * * * *
15861848 GGACGGGCGGGCGGGCACTACGCTGGCCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGT
516 GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
* * ** ** *
15861913 GGTAAGTGGGTTTAGGCACATCTTCATATTTTTGA-GGTGCCAATTACATTTTTCTGACTTGTAA
581 GGTAGGTGGGTTTAGGCACATCTTCATATTTCT-ACCATGCCAATGCCATTTTTCTGGCTTGTAA
*
15861977 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTT
645 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * *
15862042 TTCATGATTTTTG-AAACTTTTTACGATTCGGGATTTTTTAAAATTTTTTCAAAAGCAGTTTTGG
710 TTCATGA-TTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * *
15862106 CCCTAAA-TTGGTAGACGTGATCCTTGTGTTTTTGTTGGCATGCACAAAACAATTCAACTAAAAA
774 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
15862170 CTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
839 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15862220 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCCCTTTAAGGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
15862285 TTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAAGGCCAAGTATCAACACCCATCGCACAT
66 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * **
15862350 CATGTGCGCACACCCCCTCGA-----TC-AT---CGGAACCCCAATGCCGCCAGTCAGAATCTCC
131 CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
** * * * *
15862406 GACGATGGTGTCCCGGTGAAGAAAAATGCGGCACTAGCACATGCCCGAAC-CAGCATGTGTTACC
196 GACGATGGTGT-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCC
* * * ** *
15862470 GTAACCCTCGGTTCAGTCCGATCTTAGACTACGAATGAACTCTATATGCTTAGACTGGGAATGAA
260 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
** * *
15862535 CTCCGTATGCCTAAGTCAACCCACGAAGTGAGCGTGCGGCCGCTCAGTCGGCCAGAGGG
325 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
15862594 CCAAGTACCT
Statistics
Matches: 11936, Mismatches: 1378, Indels: 553
0.86 0.10 0.04
Matches are distributed among these distances:
843 166 0.01
844 6 0.00
845 4 0.00
846 6 0.00
847 454 0.04
848 11 0.00
849 1 0.00
850 97 0.01
851 1 0.00
854 2 0.00
857 87 0.01
858 153 0.01
859 13 0.00
860 319 0.03
861 7 0.00
862 40 0.00
863 269 0.02
864 6 0.00
865 105 0.01
866 97 0.01
867 427 0.04
868 14 0.00
869 98 0.01
870 469 0.04
873 4 0.00
874 5 0.00
875 3 0.00
876 618 0.05
877 46 0.00
878 404 0.03
879 172 0.01
880 201 0.02
881 240 0.02
882 107 0.01
883 372 0.03
884 71 0.01
885 218 0.02
886 463 0.04
887 329 0.03
888 949 0.08
889 789 0.07
890 599 0.05
891 782 0.07
892 1417 0.12
893 698 0.06
894 294 0.02
895 183 0.02
896 119 0.01
897 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
CATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
GACGATGGTGTCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAGCATGTGCTGCCG
CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
GCGCAAGCCGGGGATCGACCGGGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGT
CCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG
GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
GTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
ATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
Found at i:15850208 original size:26 final size:26
Alignment explanation
Indices: 15850179--15850231 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15850169 CCGGTCCGAT
15850179 CTTAGACTGGGAAAGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
*
15850205 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
15850231 C
1 C
15850232 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCGTATG
Found at i:15852847 original size:26 final size:26
Alignment explanation
Indices: 15852818--15852870 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15852808 CCAGTTTGAT
15852818 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15852844 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15852870 C
1 C
15852871 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15853751 original size:25 final size:26
Alignment explanation
Indices: 15853714--15853765 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
15853704 CCATTCCGAT
*
15853714 CTTAGACTGGGAATGAAC-TCGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
15853739 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
15853765 C
1 C
15853766 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 17 0.68
26 8 0.32
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTTCGTATG
Found at i:15854651 original size:25 final size:26
Alignment explanation
Indices: 15854602--15854653 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
15854592 CTGGTCTGAT
*
15854602 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15854628 CTTAGATTGGG-ATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15854653 C
1 C
15854654 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 14 0.58
26 10 0.42
ACGTcount: A:0.25, C:0.17, G:0.27, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15855531 original size:26 final size:25
Alignment explanation
Indices: 15855480--15855531 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 25
15855470 CTGGTATGAT
*
15855480 CTTAGACTGGAATGAACTCCGTATG
1 CTTAGACTGGAATGAACTCCGCATG
*
15855505 CTTAGACTAGGAATGAACTTCGCATG
1 CTTAGACT-GGAATGAACTCCGCATG
15855531 C
1 C
15855532 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 8 0.33
26 16 0.67
ACGTcount: A:0.29, C:0.21, G:0.23, T:0.27
Consensus pattern (25 bp):
CTTAGACTGGAATGAACTCCGCATG
Found at i:15856405 original size:26 final size:26
Alignment explanation
Indices: 15856369--15856422 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
15856359 CCTCTGATCT
15856369 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
*
15856395 TAGACTGGGAATGAACTTCGTATGCC
1 TAGACTGGGAATGAACTCCGTATGCC
15856421 TA
1 TA
15856423 AGTCAATCCA
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCC
Found at i:15857287 original size:26 final size:26
Alignment explanation
Indices: 15857258--15857308 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15857248 CCGGTCAAAT
*
15857258 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
15857284 CTTAGACTGAGAATGAACTCCGTAT
1 CTTAGACTGAGAATGAACTCCGTAT
15857309 ACCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.20, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:15862543 original size:26 final size:26
Alignment explanation
Indices: 15862492--15862544 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15862482 TCAGTCCGAT
*
15862492 CTTAGACTACGAATGAACTCTATATG
1 CTTAGACTACGAATGAACTCCATATG
** *
15862518 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTACGAATGAACTCCATATG
15862544 C
1 C
15862545 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCATATG
Found at i:15862823 original size:26 final size:26
Alignment explanation
Indices: 15862772--15862824 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15862762 CCGGTCCAAT
* *
15862772 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTACATATG
*
15862798 CTTAGACTAGGAATGAACTACGTATG
1 CTTAGACTAGGAATGAACTACATATG
15862824 C
1 C
15862825 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.19, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTACATATG
Found at i:15863515 original size:26 final size:26
Alignment explanation
Indices: 15863486--15863538 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15863476 CCAGTCTGAT
15863486 CTTAGACTAGG-AATGAACTCCATATG
1 CTTAGACT-GGAAATGAACTCCATATG
*
15863512 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCATATG
15863538 C
1 C
15863539 CTATGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 2 0.08
26 23 0.92
ACGTcount: A:0.32, C:0.21, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCATATG
Found at i:15864133 original size:722 final size:700
Alignment explanation
Indices: 15862590--15864332 Score: 1946
Period size: 722 Copynumber: 2.4 Consensus size: 700
15862580 AGTCGGCCAG
* * *
15862590 AGGGCCAAGTACCTGCACCCATTGCACATCATGTGCGCACACCCCCCCGGCAACCCCT-GATCGT
1 AGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGAACA-CCCCCCGGC--CCCCTCGATCGC
* * * * *
15862654 CGGAACCCCAATGTC-ACCGGTCATGTTCTCCGGCGATGGTCTCCCGATGAAGAAAGATACGGCA
63 CGG-ACCCCAATGCCGA-CGGTCAGGTTCTCCGGTGATGGTGTCCCGGTGAAGAAA-ATACGGCA
* * * *
15862718 CCAGCACATGCCCGAGCCAAACATGTGCTGCCGCAACCCTCGGTCCGGTCCA-ATCTTAGACTGG
125 CCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGT-CAGATCTTAGACTGG
* *
15862782 GAATGAACTCCATATGCTTAGACTAGGAATGAACTACGTATGCCTAAGTCAACCCATGAAAGGAG
189 GAATGAACTCCATATGCTTAGACT-GGAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAG
* *
15862847 CGTGCAGGCGGGCGGGCACTACA-CCGGCCAGAGAGGCAGGATGTGCAAGCCGTGGATCGATAGC
253 C--GC--GCGGGC--G--CT-CAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGC
* * *
15862911 GTATGGCGGTTTAGGCACACTTCATAGTTTTCCCGTCTAGATTCAATGGCATTTTTTGGCTGTAA
309 GTATGGCGGTTTAGGCACACTTCATAGTTTTCCCG-ATAGA-CCAATGCCATTTTTTGGCTGTAA
*
15862976 ATTCATACAATGGTCCCTTAAGCCTCACGATGAACTGTCATGGCATCGACTCTTTTTTATTTCTC
372 ATTCATACAATGGTCCCTTAAGCCTCACGATGAACTGTCATGGCATCGACTCTTTTCTATTTCTC
* * *
15863041 TAATTTTGAAACTTTTATGTTCGGGGTTGAACTTTTTCATAAGGAGTTCTTCCCCAAACTATGCA
437 TAATTTTGAAACTTTTAGGTTCGGGGTTAAACTTTTTCAAAAGGAGTTCTTCCCCAAACTATGCA
* ** *
15863106 TAGAGAGTTGATCCTTATGTTATTGTTGGACAGCACAAAAACGTTCAGCGTAAAACATCTAGGTA
502 TAGAGAGTTGATCCTTATATTATTGTTGGACAGCACAAAAAC-TTCAGCCAAAAACATCAAGGTA
* * * *
15863171 CGGCATTGTCTGACCATCTGAAAAAAGTGCCCATTTCAGACACTTATGGCTACTGGCAGCAAACC
566 CAGCATTGTCTGACCATCTGAAAAAAGTGCCCATTTCAAACACTTATAGCTACTGGCACCAAACC
* *
15863236 TGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGCTAGGGGGCGA
631 TGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
15863301 ATATA
696 ATATA
* * * *
15863306 AGGGCCAAGTACCAGCACCCATCGCACATCATGTACGTACACCCCCCGGCCCCC-CTGATCGTCA
1 AGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGAACACCCCCCGGCCCCCTC-GATCG-CC
* * * * * *
15863370 GAACCCCAATGCAGTCAGTCAGGTTCACCGATGATGGTGTCCCGGTGAAGAGAAATACGGCACCA
64 GGACCCCAATGCCGACGGTCAGGTTCTCCGGTGATGGTGTCCCGGTGAAGA-AAATACGGCACCA
* * * * *
15863435 GCACATGCTCGAACCCAGCATGTGCTGCCGTATCCCTCGGTCCAGTCTGATCTTAGACTAGGAAT
128 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCAGATCTTAGACTGGGAAT
* * *
15863500 GAACTCCATATGCTTAGACTGGAAATGAACTCCGTATGCCTATGTCAACCCACGGAACGAGCGCG
193 GAACTCCATATGCTTAGACTGG-AATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGCG
* * * *
15863565 TGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
257 CGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGCGT-AT-GG-CGGT
*
15863630 TTAGGCACATCTTCATA-TTTCTGCC-AT-G-CCAATGCCATTTTTCTGGCTTGTAAATTCATAC
319 TTAGGCACA-CTTCATAGTTT-TCCCGATAGACCAATGCCATTTTT-TGGC-TGTAAATTCATAC
* * * * *
15863691 AATGGTCCCTTAAGCCTTCATG-TGAAGTTTCATGGCAAGAT-GACTCGTTTTCTATTTTTTCTG
380 AATGGTCCCTTAAGCC-TCACGATGAACTGTCATGGC---ATCGACTC-TTTTCTA-TTTCTCTA
** * * * *
15863754 ATTTTCGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTTAAAAGGATTTTTTACCCCAAA
439 ATTTT-GAAAC-TTTTA-GGTTC-GG---GGTT-AAACTTTTTCAAAAGGAGTTCTT-CCCCAAA
* * * * * *
15863819 CT-TG-GTAGA-TG-TGATCCTTGTATTTTTGTTGG-CGTGCTCAAGACAA-TTCAGCCAAAAAC
495 CTATGCATAGAGAGTTGATCCTTATATTATTGTTGGAC-AGCACAA-A-AACTTCAGCCAAAAAC
* * * *
15863878 -TCGAAGTGTACAAG-ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAAACACTTTAATAG
557 ATC-AAG-GTAC-AGCATTGTCTGACCATCTGAAAAAAGTG--CCCATTTCAAACAC-TT-ATAG
15863941 CTACTGGCACCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGA
615 CTACTGGCACCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTCGAGGTTTGA
15864006 TGAGGGATAGGGGGCCAATATA
679 TGAGGGATAGGGGGCCAATATA
*
15864028 AGGGCCAAGTACCAGCACCTATTGCACATCATGTGCGAACACCACCCCGGCCCCCTCGATCGCCG
1 AGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGAACACC-CCCCGGCCCCCTCGATCGCCG
15864093 GACCCCAATGCCGACGGTCAGGTTCTCCGGTGATGGTGTCCCGGTGAAGAAAAATACGGCACCAG
65 GACCCCAATGCCGACGGTCAGGTTCTCCGGTGATGGTGTCCCGGTGAAG-AAAATACGGCACCAG
* * * * *
15864158 CACATGCTTGAGCCCAGCATGTGCTGTCGCAACCCTCGATCTGATTCAG-TCTTAGACTGGGAAT
129 CACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CAGTCAGATCTTAGACTGGGAAT
* * * * *
15864222 CAACTCCGTATGCTTAGACTGGGAATGAATTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
193 GAACTCCATATGCTTAGACT-GGAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGCG
* * * *
15864287 CGGGAC-CTCAGCAGGCC-GAGCGGCGGGATGCGCATGCCGAGGATCG
257 CGGG-CGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
15864333 GTCGGGTCCC
Statistics
Matches: 871, Mismatches: 109, Indels: 89
0.81 0.10 0.08
Matches are distributed among these distances:
705 14 0.02
706 46 0.05
707 43 0.05
708 8 0.01
709 20 0.02
710 23 0.03
711 11 0.01
712 7 0.01
713 12 0.01
714 166 0.19
715 17 0.02
716 73 0.08
717 28 0.03
718 9 0.01
719 31 0.04
720 11 0.01
721 69 0.08
722 258 0.30
723 24 0.03
724 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (700 bp):
AGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGAACACCCCCCGGCCCCCTCGATCGCCGG
ACCCCAATGCCGACGGTCAGGTTCTCCGGTGATGGTGTCCCGGTGAAGAAAATACGGCACCAGCA
CATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCAGATCTTAGACTGGGAATGAA
CTCCATATGCTTAGACTGGAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGCGCGGG
CGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGCGTATGGCGGTTTAGGCA
CACTTCATAGTTTTCCCGATAGACCAATGCCATTTTTTGGCTGTAAATTCATACAATGGTCCCTT
AAGCCTCACGATGAACTGTCATGGCATCGACTCTTTTCTATTTCTCTAATTTTGAAACTTTTAGG
TTCGGGGTTAAACTTTTTCAAAAGGAGTTCTTCCCCAAACTATGCATAGAGAGTTGATCCTTATA
TTATTGTTGGACAGCACAAAAACTTCAGCCAAAAACATCAAGGTACAGCATTGTCTGACCATCTG
AAAAAAGTGCCCATTTCAAACACTTATAGCTACTGGCACCAAACCTGTAAAATCTCAAATGCTCT
TTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
Found at i:15865879 original size:729 final size:729
Alignment explanation
Indices: 15864392--15865898 Score: 2186
Period size: 729 Copynumber: 2.1 Consensus size: 729
15864382 CTAGTCTGAT
* * * * *
15864392 CTTAGACTGGGAAAGAACTTCGTATGCCTAAGCCAACCGATGAAATGAGTGGGCGGGCGGGCGGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTAGGCGGGCGGGCGGC
* *
15864457 CACTACGTCGGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAG
66 CACTACGCCGGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * * * * *
15864522 GCACATCTTCATATTTTTTCCATGCCAATGCCATTTTTCTACCTTGTAAATTCATACAGTGGTCC
131 GCACATCTCCATAATTCTGCCATGCCAATGCCATTTTTCTACCTTGAAAATTCATACAATGGTCC
* * * **
15864587 CTTAAGCCGTCATGTGAAGTGTCATGGCAAGATGACTCATTTTCTGTTTTTTACAATTTTTGAAA
196 CTTAAGCCGTCATGTGAAGTGTCATGGCAAGACGACTCATTTTCTATTTTTCACAATTTTCAAAA
* * *
15864652 CTTTTTATGGTTCAGGATTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGGTAGACG
261 CTTTTTACGGTTCAGGATTTTTAAAATTTTTTCAGAAGGAGTTTTGACCCCAAACTTGGTAGACA
* *
15864717 TGATCCTTGTATTTTTGTTGGTATGCAAAAAAATATTCAGCCAACAACTCAAAGTGTACAAGATT
326 TGATCCTTGTATTTTTGTTGGCATGCAAAAAAATATTCAGCCAAAAACTCAAAGTGTACAAGA-T
*
15864782 TTGTGACCATTTGAAAAAAATGTCCCCATTTCAAACACTTTAATGGCTATTGACAGCAAACCTGT
390 TTGTGACCATTTGAAAAAAATGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAACCTGT
15864847 AAAATCTCAAATGCTCTGTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
455 AAAATCTCAAATGCTCTGTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
* * * * *
15864912 ATAAGGGCCAAGTACCAGCACCCATTGTACATCATGTGTGCACACCCCCTGGGCCCCCCCGATCG
520 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCTGGGCCCCCCCAATCG
* * *
15864977 TCTGAACCCCAATGTCGCCGGTCAGGTTCTCCGATGATGGTGTCCCGGCGAAGAAAAATACGGCA
585 TCTGAACCCCAATATCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCAAAGAAAAATACGGCA
* * *
15865042 CCAGCACATGCCCGAGCCCAGTATTTGCTACCGCAACCCCCGATCTGGTCCGATCTTACACTAGG
650 CCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCCCGATCTGGTCCAATCTTACACTAGG
*
15865107 AATGAACTTCGTATG
715 AATGAACTTCATATG
* * * *
15865122 CTTAGACTAGGAATGAACTCCG-ATGCCTAAGCCAATCGACGAAACGAGTAGGCGGGTGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTAGGCGGGCGGGCGGC
*
15865186 CACTACGCCGGCCA-AAGAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
66 CACTACGCCGGCCAGAA-AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
**
15865250 GGCACATCTCCATAATTCTGCCATGCCAATGCCATTTTTCTGGCTTGAAAATTCATACAATGGTC
130 GGCACATCTCCATAATTCTGCCATGCCAATGCCATTTTTCTACCTTGAAAATTCATACAATGGTC
* * * **
15865315 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAA
195 CCTTAAGCCGTCATGTGAAGTGTCATGGCAAGACGACTCATTTTCTATTTTTCACAATTTTCAAA
** *
15865380 ACTTTTTACGGTTTTGGGATTTTATAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAG
260 ACTTTTTACGG-TTCAGGATTTT-TAAAATTTTTTCAGAAGGAGTTTTGACCCCAAACTTGGTAG
* * *
15865445 TCATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-ATTCAGCTAAAAACTTAAAGTGTACAA
323 ACATGATCCTTGTATTTTTGTTGGCATGCA-AAAAAATATTCAGCCAAAAACTCAAAGTGTACAA
* *
15865509 GA-TTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
387 GATTTGTGACCATTTGAAAAAAATGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAACC
* *
15865573 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGG-
452 TGTAAAATCTCAAATGCTCTGTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGAT-AGGGGGC
15865637 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCTGGG-CCCCCCA
516 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCTGGGCCCCCCCA
* * ** * * *
15865701 ATCG-CTGAAACCCTAATATCGCCTGTCAGGTTCTTTGGCGATGGTGTCTCGGCAAAGAAAAATG
581 ATCGTCTG-AACCCCAATATCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCAAAGAAAAATA
* * * * *
15865765 TGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCT-GTCCAATCTTAG
645 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCCCGAT-CTGGTCCAATCTTAC
*
15865829 ACTGGGAATGAAC-TCTATATG
709 ACTAGGAATGAACTTC-ATATG
* * * * *
15865850 CTTTGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
15865899 CGTGTGGGCA
Statistics
Matches: 690, Mismatches: 78, Indels: 19
0.88 0.10 0.02
Matches are distributed among these distances:
727 5 0.01
728 146 0.21
729 407 0.59
730 34 0.05
731 92 0.13
732 6 0.01
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.27
Consensus pattern (729 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTAGGCGGGCGGGCGGC
CACTACGCCGGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTCCATAATTCTGCCATGCCAATGCCATTTTTCTACCTTGAAAATTCATACAATGGTCC
CTTAAGCCGTCATGTGAAGTGTCATGGCAAGACGACTCATTTTCTATTTTTCACAATTTTCAAAA
CTTTTTACGGTTCAGGATTTTTAAAATTTTTTCAGAAGGAGTTTTGACCCCAAACTTGGTAGACA
TGATCCTTGTATTTTTGTTGGCATGCAAAAAAATATTCAGCCAAAAACTCAAAGTGTACAAGATT
TGTGACCATTTGAAAAAAATGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAACCTGTA
AAATCTCAAATGCTCTGTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCTGGGCCCCCCCAATCGT
CTGAACCCCAATATCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCAAAGAAAAATACGGCAC
CAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCCCGATCTGGTCCAATCTTACACTAGGA
ATGAACTTCATATG
Found at i:15871044 original size:26 final size:26
Alignment explanation
Indices: 15871015--15871068 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
15871005 GATCCGATCT
*
15871015 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTAGGAATGAACTCCGTATGCC
15871041 TAGACTAGGAATGAACTCCGTATGCC
1 TAGACTAGGAATGAACTCCGTATGCC
15871067 TA
1 TA
15871069 AGTCAAACCA
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.22, G:0.24, T:0.24
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCGTATGCC
Found at i:15871940 original size:26 final size:26
Alignment explanation
Indices: 15871904--15871956 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15871894 CCAGTCCGAT
*
15871904 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15871930 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15871956 C
1 C
15871957 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15872841 original size:26 final size:26
Alignment explanation
Indices: 15872805--15872857 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15872795 CCGGTCCAAT
*
15872805 CTTAGACTGGGAATGAACTGCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15872831 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15872857 C
1 C
15872858 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15874652 original size:26 final size:26
Alignment explanation
Indices: 15874616--15874668 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15874606 CTGGTCCCAT
* * *
15874616 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAAAGAAATCCGTATG
15874642 CTTAGACTGGGAAAGAAATCCGTATG
1 CTTAGACTGGGAAAGAAATCCGTATG
15874668 C
1 C
15874669 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAAATCCGTATG
Found at i:15876753 original size:889 final size:887
Alignment explanation
Indices: 15868769--15878063 Score: 9047
Period size: 888 Copynumber: 10.5 Consensus size: 887
15868759 CTGCCATGCC
* * * *
15868769 AAGCCTTCATGTGAAGTCTCATGGCGAGATGACTCCTTTTCTATTTTTCATGATTTTTGAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* *
15868834 TTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGCGTTTTGGCCCCAAACTTGGTAGACGTG
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
15868899 ATCCTTGTATTTTTTTTTGGCATGCACAAAAAAATTCACCTAAAAACTCGAAGTGTACAAGATTT
131 ATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
*
15868964 TGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
195 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* * *
15869029 AAATCTCAAATGTTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCTATA
260 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * *
15869094 TAAGGGCCAAGTACCAGCACCCATCGCACACCATGTGTGCACACCCCCCCGGTCGCCCCC-ATCA
325 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCCGATCG
* * * ** * * ** * * *
15869158 CCGGATCCCCAAAGTCACCGGTCAGGTTCTCCGACTATAGTGTCCCGGTGATGAAAAATGCGACA
388 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCA
* *
15869223 CCAGCACATGCCCA-AGCCCAGCATGTGCTACCGCAA-CC-C--T-CGGT----TC-T-G--T-C
453 CCAGCACATG-CCAGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGG
* * * *
15869273 CAAT---CT-C--A-G----G-CTGGGAATAAACTCTGTATGCCTAAGTCAACCCACG-AACGAG
517 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAA
* * * * * * ** *
15869325 CGCGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCTGGGGATCAGTAGGG-CTGCCTC
582 CGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTC-CCCTC
* * ** * * * * *
15869389 TGCATGCTACCGATCCTGCTGCCGCAA-CCTTCGGTCCGGTCCAATCTTAGACTGGGAATAAACT
646 TACGTGCTGTCGATCCTGCTGCCACAACCCTT-GATCTGATCCAATCTTAGACTGGGAATGAACT
* *
15869453 CCGTATGCCTAAGCCAACCGACG---AAACGGGAGGGCGGGCGGGCACTACGCCGGCCAGAGAGG
710 CCGTATGCCTAAGCCAACCGACGAAAAAACGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGG
* * * **
15869515 CGGGACGCGCAAGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTAT
775 CGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15869580 CGTGCCAATGCCATTTTTTTGGCTTGTAAATTAATACAATGGTCCCTT
840 CATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
* * *
15869628 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCAAGATTTTTGAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * *
15869693 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAAGAGTTTTAGCCCCAAACTTGGTAGACGTG
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
*
15869758 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCTGCTAAAAACTCGAAGTGTACAAGATTTT
131 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
15869823 GTGACCATTGGAAAAAAGTGTACCCCATTTCAGTCACTTTAATGGCCTACTGGCCAGCAAACCTG
196 GTGACCATTTGAAAAAAGTGT-CCCCATTTCAGACACTTTAATGG-CTACTGG-CAGCAAACCTG
* *
15869888 TAAAATTTCATAATCCTC-TTAAGGGGGTGTGAGTTCTCGAGG-TTGATGAGGGATAGGGGGCCA
258 TAAAATCTCA-AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
15869951 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGTCCCCCTCCG
322 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCC-CCG
* * ** *
15870016 ATCGTCGGAACCCAAATATCATCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGT
384 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGT
* * * ** *
15870081 TGCACCAGCAAATGCCCA-AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAATCTGATCTTAGA
449 GGCACCAGCACATG-CCAGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGA
* ** * *
15870145 CTGGGAACGAACTTAGTATGCTTAGA-TAGGGAAT-AATCTCCATATGCCTAAGTGAACCCACGA
513 CTGGGAATGAACTCCGTATGCTTAGACT-GGGAATGAA-CTCCGTATGCCTAAGTCAACCCACGA
* * * * * **
15870208 AATGAGA-GTGCGGCCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGGTTGGGT
576 AACGA-ACGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT
* ** * * * * * * *
15870272 CCTCATCTGTGTGCTGTCGATCCTACTGCCACAACCGTCGGTCCGATCTAATCTTAGACAGGGAA
640 CC-CCTCTACGTGCTGTCGATCCTGCTGCCACAACCCTTGATCTGATCCAATCTTAGACTGGGAA
* * * * * * * *
15870337 TCAACTCCGTATGCCTAAGCGAACCGATGAAATGAGCGGGTGGGCGGGCAGGCACTACGTTGGCC
704 TGAACTCCGTATGCCTAAGCCAACCGACGAAA-AAACGGGCGGGCGGGCGGGCACTACGCTGGCC
* *
15870402 AGAGAGGCAGGATGCGTAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
768 AGAGAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
15870467 TTTCTGCCATGCCAATGCC-TTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
833 TTTCTGCCATGCCAATGCCATTTTTT-TGGCTTGTAAATTCATACAATGGTCCCTT
* * **
15870522 AAGCCTTCATGTGAAGTTTTATGGCAAGACGACTCGTTTTCTATTTTTTGCATAATTTTCAAAAC
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTT-CATGATTTTTGAAAC
** * * *
15870587 TTTTTACGGTTTAGGATTTTTTTAAATTTTTTTAGAAGGAGTTTAGGCCCCAAACTTGGTAGACG
64 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * * *
15870652 TGATCCTTGTATTTTTTTTTGGCAGGCATAAAAAAATTCAGCTAAATACTCGAAGTGTACAAGAT
129 TGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* *
15870717 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATTGCTACTGGCAGCAAACCTG
193 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
15870782 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTTGATAAGGGATAGGGGGCCA
258 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG-TTTGATGAGGGATAGGGGGCCA
*
15870847 ATATAAGAGCCAAGTACCAGCACCCATCGCA-AT-ATGTGACGCACA-CCCCCGG--CCCCCGAT
322 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG-CGCACACCCCCCGGCCCCCCCGAT
****
15870907 CGCCGGAACCCCAATGTTACCGGTCA-GTTCT-C--CGA-----T---G--GAAG-AAAATGTGG
386 CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGG
* * * * *
15870957 TACCAGCACATGCCCGAGCCCAGCATGTGTTGCCGCAACCCTC-GATCTGATCCGATCTTAGACT
451 CACCAGCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCAG-TCCGGTCCGATCTTAGACT
* * * **
15871021 GGGAATGAACTCCGTATGCCTAGACTAGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAATA
515 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * *
15871086 AACGTGCGGGCACTCAGCCAGCCAGATGGGCGAGATGCGCAAGCCGGGGATCAGCCGAGTCCCCA
580 AACGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCC-
* ** * * * * * *
15871151 TGTACGTGCTACCGATACC-CCTGCCACAACCCTCGGTCTGATCAAATCTTTGACAGGGAATGAA
644 TCTACGTGCTGTCGAT-CCTGCTGCCACAACCCTTGATCTGATCCAATCTTAGACTGGGAATGAA
* * * *
15871215 CTCCGTATGCCTAAGCGAGACCGACGAAATGACCGGGCGGGCGGGAGGGCACTACGCTGGCCAGA
708 CTCCGTATGCCTAAGCCA-ACCGACGAAA-AAACGGGCGGGCGGGCGGGCACTACGCTGGCCAGA
* * *
15871280 GAGGCGAGATGCGTAAGCCGTGGATCGATAGGGTGTTTGGTGGGTTTAGGCACATCTTCATATTT
771 GAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
15871345 CTGCCATGCCAATGCCATTTTTCTGGGTTGTAAATTCATACAATGGTCCCTT
836 CTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
* * *
15871397 AAGCCTTCATCTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * ** * *
15871462 TTTATGGTTCGGGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGTTCCAAACATGGAAGACGTG
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* * * *
15871527 ATCCTTGTATTTTTTTTGGTATGCACAAAAAAATTCAGCTTAAAACTAGAAGTGTACAAGATTTT
131 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
*
15871592 GTGACCATTTGAAAAAAGTGTCCCCATTT-AGACACTTTAAT-GCTACTGGCAGCAAACTTGTAA
196 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* *
15871655 AATCTCAAATGCTCTTTAAGGGGGTGCGAGGTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
261 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * * *
15871720 TAGGGTCAAGTACCAGAACCCATCGCACATCATGTGCCCACACCCCCCTCGGCCCCCCCCGATCG
326 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGG-CCCCCCCGATCG
* * * * * *
15871785 TCGAAACCCCAATGCTGTCGATCAGGTTCTCCGACGATGGTGTCCC-AGTGAAGAAAAATGCGGC
388 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATGTGGC
* * *
15871849 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGG
452 ACCAGCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGG
* * *
15871914 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAA
517 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAA
* * * * *
15871979 CGTGCTGGTGCTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTC-
582 CGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTCT
* * * * * * *
15872043 -C-T-CTG-CG-TGCTGCTG---TAACCCTCGGTCTGGTCCAATCTTAGACTAGGAATGAACTCT
647 ACGTGCTGTCGATCCTGCTGCCACAACCCTTGATCTGATCCAATCTTAGACTGGGAATGAACTCC
* * * * * * * *
15872100 GTATGCCTAAGTCAACC--C-ATAAAACGAGCGTGCGGGC--GCTC-A-GCCGACCAGAGGGGCG
712 GTATGCCTAAGCCAACCGACGAAAAAACGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCG
* * * * ***** * **
15872158 GGATGCGTAAGTCGAGGATCGGTCGGGT-CCCCCT--CTACATGCTGC-CGATC--CA-ATTGCC
777 GGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA-G--GCAC-ATCTTCATATT---
* * * ** *** * ** ** * *
15872216 GTATCCCTTGGTCCGGT-CCA-ACCTTAGGC-TGGGAATGAACTCCGTAT-G--CC-T
835 -TCTGCCAT-G-CCAATGCCATTTTTTTGGCTTGTAAATTCA-TAC-AATGGTCCCTT
** **** *** * * * *** * *****
15872267 AAGCCAACCGACAAAACGAGCGGGC-GGGC-GGGCGGGCACTACGTCAGCCAGAGAGGCGGGATG
1 AAGCC-TTC-ATGTGA--AG-TTTCATGGCAAGAC--G-ACT-CGTTTTCTA-TTTTTC---AT-
**** * * ** * * * ** * * * *
15872330 CGCAAGCCATGGATCGATGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTCATGCCAA
52 -G--ATTTTTGAAAC--T---TTTTA---CGG-TTCGGGATTTTTTAAAATTT-TTTCA-G--AA
* * *** ** * * * * **** **
15872395 TGCCATTTTTCTGGCTTGTAAA-TTCATACA-ATGGTCCCT-TA--AGCCTT--CATG----TGA
101 -G-GA-GTTT-TGGC-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
** * * * * *
15872449 AGTTTCATGGC-AAGACGACTCGTTTTATATTTTGCATGATTTTGTGACCATTT-AAAGAAAGTG
161 AAATTCA--GCTAA-A-AACTCG----A-AGTGTACAAGATTTTGTGACCATTTGAAA-AAAGTG
*
15872512 TCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
216 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* **
15872577 GGGGTGTGAGTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTTGCACC
281 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * * **
15872642 CATCGCACATCATGTGCGCATACCGCCCCTGGCCCCCCGGATCACCGGAACTCTAATGCCACCGG
346 CATCGCACATCATGTGCGCACACC-CCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGG
** * *
15872707 TCAGGTTCTCC-AGCGATGGTGTCCCGACGAAGAAAAATGTGATACCAGCACATGCCTGAGCCTA
409 TCAGGTTCTCCGA-CGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCCAGAGCCCA
* * * * *
15872771 GCATGTGCTGCCGTAACCATCGGTCCGGTCCAATCTTAGACTGGGAATGAACTGCGTATGCTTAG
473 GCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
*
15872836 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAACCGGCC
538 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAACCGGCC
** * * * * *
15872901 AGAGGGGCGGGATGCATAAGTCGGGGATCGGCCGGGTCCCCTTTGCGTGCCGTCGATCCTGCTAC
603 AGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTCTACGTGCTGTCGATCCTGCTGC
* * * * *
15872966 CGCATCCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACG
668 CACAACCCTTGATCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* ** * * * * * *
15873031 AAACGAGTGGGCGCGTGGGCGGGCACTATGCCGGCCAAAGAGGCGGGATGCGAAAGCCGTGGATC
733 AAA-AAACGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGTAAGCCGTGGATC
* * * *
15873096 GATAGGGTGGTAGGTGGGTTTAGGTATATCTTCATATTTCTACCATGCCAATTCCATTTTTTTGG
797 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGG
*
15873161 CTTGTAAATTCATACAGTGGTCCCTT
862 CTTGTAAATTCATACAATGGTCCCTT
* *
15873187 AAGCCTTCATGTGAAGTTTCATGACAAGACGACTCGTTTTTTATTTTTCATGATTTTTGAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * * *
15873252 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGTCCCTAACCTGGTAGACGTC
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* * * *
15873317 ATCCTTTTATTTTTGTTGGCATGTACAAAAAAATTCAGCAAAAAACTCAAAGTGTACAAGATTTT
131 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
15873382 GTGACTATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAA
196 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
15873447 ACA-CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
261 A-ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * *
15873511 TAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGTACACCCCCCCGAG-TCCCCCGATCG
325 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-GCCCCCCCGATCG
* * * * * * *
15873575 TCGGAACCCCAATACTGTCGGTCAGGTTCTTCGGCGATGGTGTCCCGACGAAGAAAAATATGACA
388 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCA
* * * * ** * ***
15873640 CCAGCACATGCCCGAGCCCAG-ATTGGGAATGAACACTGTATGCCTAAGTCAACCCACGAAACGA
453 CCAGCACATGCCAGAGCCCAGCA-TGTG-CTG--C-C-GCAACCCTCAGT-----C-CGGTCCGA
* * * *** * * * * * * * * *
15873704 ACGTGTGGACACTCAGTCGGCCA-GAGGGGCGGGATGCGTAAGCCAGGGATCGGCTGAGTCCCCC
506 TC-T-T--AGACT--G--GG-AATGA-ACTCCGTATGC-TTAGACTGGGA----ATGA-ACTCCG
* * * ** * * ** * * * * * *
15873768 TCT-CTGGTCGAGTCCCCCCCCGACCAC-CCCGATCACAGGAC-CCCAATGCTGCCGATCAGGTT
555 TATGC--CT-AAGTCAACCCACGA-AACGAACG-T-GC-GGGCGCTCAA-CCGGCC-A-GAGG--
** **** * * ***** * * * *
15873830 CTCCGGCGATG-GTGTTCTGGGGA--AGAAAAATACAGCACCAGC-ACATGCTCGAGCGCAGCGT
608 -GGCGG-GATGCGCAAGCCGGGGATCGGCCGGGT-C--C-CC-TCTACGTGCT-G-TCG-ATC--
* * * * ** * *
15873891 CTGCTGCCGCAACCC-TCAGTCCGTTCTGATCTTAGCCTGGGAATGAACTTCGTATGCCTAAGCC
661 CTGCTGCCACAACCCTTGA-TCTGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * * *
15873955 AACCGACGAAATGAGCGGGCGGGTGGGCGGGCACTAC-ATCGACAAGAGAGGCGAGATGCGTAAC
725 AACCGACGAAA-AAACGGGCGGGCGGGCGGGCACTACGCT-GGCCAGAGAGGCGGGATGCGTAAG
* * *
15874019 CCGTGGGTCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCA
788 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
* *
15874084 TTTTTTTGGCTTGTAAATTCATACGATGGTCCTTT
853 TTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
* * *
15874119 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCGTGATTTTGGAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * * *
15874184 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGATTTTTGACCCCAAACTTGGTAGATGTG
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
15874249 ATCCTTTTAGTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
131 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* * *
15874314 GTGACCATTTGAAAAAAGTGCCCCCATTTCAAACACTTTAATTGCTACTGGCAGCAAACCTGTAA
196 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* * *
15874379 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGAAAGGGGCCCAATAT
261 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * **
15874444 AAGGGCCAAGTACCCA-CACCCATCGCACATCATGTGCGCGCA---------CCCCCCTATCGTT
326 AAGGGCCAAGTA-CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCC
* ** * * * * ** * **
15874499 GGAACCCCGATAACGTCGGTCAGGTTCTTCGGCGCTGGTGTCTCGGTGAAAAAAAATACGGCACC
390 GGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACC
* * * *
15874564 AGCACATGCTC-GAGCCCAGCATGTGCTGCCTCAACCATC-GATCTGGTCCCATCTTAGACTGGG
455 AGCACATGC-CAGAGCCCAGCATGTGCTGCCGCAACCCTCAG-TCCGGTCCGATCTTAGACTGGG
* * * * *
15874627 AATGAACTTCGTATGCTTAGACTGGGAAAGAAATCCGTATGCCTAAGTCAACCTACGAAACGAGC
518 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAAC
* ** ** * **
15874692 GTCCGGGCGCTCTGCCGGCCAGAGGGGCGAAATGCGTAAGCCGGGGATCGATCGGGTCCCCCTCT
583 GTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT-CCCCTCT
* * * * ** * **
15874757 GCGTGCTTTTGATCGTGCTGCCACAACAATCTG-TCTGGTCTGATCTTAGACTGGGAATGAACTC
647 ACGTGCTGTCGATCCTGCTGCCACAACCCT-TGATCTGATCCAATCTTAGACTGGGAATGAACTC
* * * *
15874821 CGTACGCCTAAGCCAACCGATG---AAA----CGAGTGGGCGGGCACTACG-TCGGCCAGAGAGG
711 CGTATGCCTAAGCCAACCGACGAAAAAACGGGCGGGCGGGCGGGCACTACGCT-GGCCAGAGAGG
* ** *
15874878 CAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTCATATTTCTGC
775 CGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* ** * * *
15874943 CATTCCAATGAAAATTTTCTAGCTTGTAAATTCATACAATGGTCCCTT
840 CATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
*
15874991 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCTTGATTTTTGAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* *
15875056 TTTACGGTTCAGGATTTTTGAAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
66 TTTACGGTTCGGGATTTTT-TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* *
15875120 GATCCTTGTATTTTTGTTGGCTTGCACAAGAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
130 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* * ** *
15875185 TGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTGAATTACTACAGGCAGCAAACCTGTA
195 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
15875250 AAATCTCAAATGCTCTTTATGGGGGTGCGAGTTCTCGAGGTTTGATGAGGGATAGGGGG-CAAGT
260 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA-T
* * *
15875314 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGTACACCCCCC-GACCCCCCGATCGC
324 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC
* * * * * * *
15875378 CGAAACCCCAATGCCGTCGATCAGGTTCTCCGGCGATGGTGTCCCGGCGAAAAAAAATGAGGTAC
389 CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCAC
* *
15875443 CAGCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGATTAGGA
454 CAGCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGA
* * ** * * *
15875508 ATGAACTCCGTATGCTAAGATTCAGAATGAACTCCGTATGCCTAAGTCAACTCACGAGAC-AAGT
519 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAA-C
* * * ** *
15875572 GTGCGGGCGTTCAACTGGCCAGAGGGGCGGGATGCGTAAGTTGGGGATCGGCCGGGTCTCGCTCT
583 GTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTC-CCCTCT
* * * ** * *
15875637 ATGTGCTGTCGATCCTACTACTGCAACCCTTGATCTGATCCCATCTTAGACTGGGAATGAACTTC
647 ACGTGCTGTCGATCCTGCTGCCACAACCCTTGATCTGATCCAATCTTAGACTGGGAATGAACTCC
* * * * *
15875702 GTATGCCTAAGCCAACCGACGAAACAAGCGGGCAGGCGGGCGGGCACCACG-TCGGCTAGAGAAG
712 GTATGCCTAAGCCAACCGACGAAA-AAACGGGCGGGCGGGCGGGCACTACGCT-GGCCAGAGAGG
** * * * *
15875766 CGGGATGCACAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATAATATTTTTGC
775 CGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
15875831 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATATAATGGTCCCTT
840 CATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
15875879 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* *
15875944 TTTTCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* * **
15876009 ATCCTTGTATTTTTGTTGGCATGCATAAAAACATTCAGCTAAAAACTTAAAGTGTACAAGATTTT
131 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
15876074 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
196 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* * * *
15876139 AATCTCTAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATATGGGGCAAATAT
261 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* *
15876204 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCGGCCCCCCCAATCGCCG
326 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCG
* * * * * *
15876269 GAACCCCAATGCCGCCGATCAGGTTCTCTGACGATGGTGTCTCGACGAAGAAAAATGCGACACCA
391 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCA
* * *
15876334 GCACATGCCAGAGCCCAGCATGTTCTGTCGCAACCCTTAGTCCGGTCCGATCTTAGACTGGGAAT
456 GCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAAT
* * *** * * * *
15876399 GAACTCCGTATGCTAAGATTCAAAATGAATTACGTATGCCTAAGTCAACCCATGAAACGATCGTG
521 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTG
* * * * * *
15876464 CGAGTGCTCAATCGACCAGAGGGGCGGGATACGCAAGCCGGGGATCGGCCGAGTCCCGCTCTACG
586 CGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCC-CTCTACG
* ** * * *
15876529 TGCTATCGATCCTGCTATCACAATCCTTGATCTGATCCAATCTTAGACTAGGAATGAACTTCGTA
650 TGCTGTCGATCCTGCTGCCACAACCCTTGATCTGATCCAATCTTAGACTGGGAATGAACTCCGTA
* * * * *
15876594 TGCCTAAGCCAACCGACGAAACAAACGGGCGGGCGGGCGTGCCCTATGCTGGCCAGAGAGGTGGC
715 TGCCTAAGCCAACCGACGAAA-AAACGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGG
* * *
15876659 ATGCGTAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATCTTTTTGCCATG
779 ATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
15876724 CCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
844 CCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
* * * * * *
15876768 AAGCCTTCATGTGAGGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCACGA-TTTTCAAAATT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * *
15876832 TTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAAGTGTTTTGGCCCCAAACTTGGTAGACGTG
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
15876897 ATCCTTGTATTTTTGTTCGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
131 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
15876962 GTGACCATTTGAAAAAAGTGTCCTCATTTCGGACACTTTAATGGCTACT-G--GC--A---G-AA
196 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* * *
15877018 AA---C-----CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTAATGAGGCATAGGGGGCCAATAT
261 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
** * *
15877075 AAGGTTCAAGTACCAGCACCCATCGTACATCATGTGTGCACACCCACCCACCCGGCCCCCCCGAT
326 AAGGGCCAAGTACCAGCACCCATCGCACATCA--TGTGCGCA--CACCC-CCCGGCCCCCCCGAT
* * * * * ** *
15877140 CGCCGAAACCCCAATGTCGTCGGTCAGATTCACCGGCGATGGTGTCCCGGTGAAGAAAAATAT-G
386 CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGG
* * *
15877204 ----A-CAC-T--C-GAGCCCAGCATGTGGTGCCGTAACCCTC-GATCTGGTCCGATCTTAGACT
451 CACCAGCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCAG-TCCGGTCCGATCTTAGACT
* *
15877259 AGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACG
515 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * * * * *
15877324 AGCGTGCGGGCGCTCAGCCGGGCATAGGGGCAGGAAGCGCAAGTCGGGGGTCGACCAGGTCCCAC
580 AACGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCC-C
** * * * * * *
15877389 TCTGTGTGCTGCCAATCCTGCTGCCACAACCCTCGATC-CAGCCTGATCTTAGACTGGGAATGAA
644 TCTACGTGCTGTCGATCCTGCTGCCACAACCCTTGATCTGATCC-AATCTTAGACTGGGAATGAA
* * * ** *
15877453 CTCCGTATGGCTAAGCCAACCGATG---AAA----CGAGCGGGCGGGCACTACGCCAGCCAGAGT
708 CTCCGTATGCCTAAGCCAACCGACGAAAAAACGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGA
* * *
15877511 GGCGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
773 GGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
15877576 ACCATGCCAATGCTATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
838 GCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
*
15877626 AAGCCTTCATGTGAAGTTTCATGGCAAGACGGCTCGTTTTCTATTTTTCATGATTTTTGAAACTT
1 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
* * *
15877691 TTTATGGTTCGGTATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTG
66 TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* * * * * *
15877756 ATGCTTGTATTTTTTTTGGCATGCATAAAAATATTCAGCAAAAAACTTGAAGTGTACAAGATTTT
131 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* * * * *
15877821 GTGGCCATTTCAAAAAAGTGTCCCCATTTCAGACAATTTAATGGCTACTGGCAGCAAATCTATAA
196 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* * * * * *
15877886 AATCTTAATTGCTGTTTAAGGGGGTGTGAGTTTTCGAGG-TTGGT-AGGGATAAGGGGCCAATAT
261 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
*
15877949 AA-GGCCAAGTACGCAGCACCCAT-GCACATCATGTGCGCCACACCCCCCCACGGCCCCCGTCGA
326 AAGGGCCAAGTAC-CAGCACCCATCGCACATCATGTGCG-CACA--CCCCC-CGGCCCCC-CCGA
** * * *
15878012 TACGTTGGAACCCCAACGCCGCCGAGTCAGGGTTTTCCGACGATTGGTGTCC
385 T-CGCCGGAACCCCAATGCCGTCG-GTCA-GGTTCTCCGACGA-TGGTGTCC
15878064 GTCGTATCGA
Statistics
Matches: 6961, Mismatches: 1141, Indels: 650
0.80 0.13 0.07
Matches are distributed among these distances:
858 250 0.04
859 320 0.05
860 86 0.01
861 45 0.01
862 98 0.01
863 2 0.00
864 2 0.00
865 4 0.00
866 216 0.03
867 3 0.00
868 4 0.00
869 54 0.01
870 79 0.01
871 114 0.02
872 590 0.08
873 138 0.02
874 292 0.04
875 212 0.03
876 149 0.02
877 21 0.00
878 3 0.00
879 11 0.00
880 350 0.05
881 49 0.01
882 4 0.00
883 5 0.00
884 7 0.00
885 22 0.00
886 13 0.00
887 21 0.00
888 683 0.10
889 669 0.10
890 266 0.04
891 195 0.03
892 15 0.00
893 26 0.00
894 258 0.04
895 37 0.01
896 173 0.02
897 78 0.01
898 10 0.00
899 6 0.00
900 48 0.01
901 266 0.04
902 137 0.02
903 10 0.00
904 5 0.00
905 8 0.00
906 3 0.00
907 11 0.00
908 4 0.00
909 9 0.00
910 61 0.01
911 4 0.00
912 3 0.00
913 6 0.00
914 17 0.00
915 10 0.00
916 14 0.00
917 31 0.00
918 52 0.01
919 10 0.00
920 16 0.00
921 8 0.00
922 88 0.01
923 4 0.00
924 1 0.00
925 9 0.00
926 5 0.00
927 6 0.00
928 1 0.00
929 2 0.00
930 2 0.00
931 2 0.00
932 525 0.08
933 3 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (887 bp):
AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTT
TTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCG
GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCA
GCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAAT
GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTG
CGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTCTACGT
GCTGTCGATCCTGCTGCCACAACCCTTGATCTGATCCAATCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGCCAACCGACGAAAAAACGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGAT
GCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
AATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTT
Found at i:15877280 original size:26 final size:26
Alignment explanation
Indices: 15877251--15877303 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15877241 CTGGTCCGAT
15877251 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15877277 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15877303 C
1 C
15877304 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15879855 original size:26 final size:26
Alignment explanation
Indices: 15879804--15879856 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15879794 CTGGTCCGAT
* *
15879804 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
*
15879830 CTTAGACTAGGAATGAACTCTATATG
1 CTTAGACTAGGAATGAACTCCATATG
15879856 C
1 C
15879857 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:15881596 original size:26 final size:26
Alignment explanation
Indices: 15881560--15881612 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15881550 CCAGTCCGAT
*
15881560 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15881586 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15881612 C
1 C
15881613 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15882083 original size:889 final size:886
Alignment explanation
Indices: 15879292--15882474 Score: 4208
Period size: 888 Copynumber: 3.6 Consensus size: 886
15879282 NNNNNNNNNN
* *
15879292 TCCCTTAACCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTCTTTTTCACGATTTTTG
1 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
** *
15879357 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTA
66 AAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
15879422 TACGTGATCCTTGTATTTTTGTGGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAA
131 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * *
15879487 GATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCATACACTTTAATGGCTACTGGCCGCAAAC
196 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
15879552 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGTGATAGAGGGC
261 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * * *
15879617 CAATATAAGGGCCAAGTGCCAGCACCCATCACACATCATGTGCGCACACCCTCCCGACCCACCCA
326 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCCG
* * * *
15879682 ATCACCGGAACTCTAATGCCGTCGGTCAGGTTCTCCGGC-AGTGGTGT-CCGACGAAGAAAAATG
390 ATCACCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA-TGGTGTCCCGACGAAGAAAAATA
* * * *
15879745 C-AGCACTAGTACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAG
454 CGA-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CGTCCGATCTTAG
* * * *
15879809 ACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTATATGCCTAAGTCAACCCATGAA
517 ACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAA
* * * * * * * * *
15879874 ACGAGCGTGCGGGCGCTCAGCCGGCTAGAGGGGTGGGATGCACAAGTCGAGGTTTGATCAGGTCC
582 ATGAGTGTGCGGGCGCTCAGCC-GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCC
* * * * * * ** * * *
15879939 CCCTCTGCATGCCGTCAATCCTACTACCACAACCCTTGGTCCGATCCAATCTTAGACT-AACAAT
646 CCCTCTGCGTGCTGTCGATCCTGCT-GCGCAACCCTCAGTCCGGTCCAATCTTAGATTGGA-AAT
* ** *
15880003 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-GGGTAGGCGGGCACTACGCCGGCCA
709 GAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCAGGCCA
*
15880067 GAGAGGCGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
774 GAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* *
15880132 TTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCACACAATGG
839 TTCTGCCATGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGG
* *
15880180 TCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
1 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
* ** * * * * *
15880245 AAACTTTTTTCGGTTCGGGATTTTTCAATATTTTTTCAGAAGGTGTTTTGTCCCCAAACTAGGTA
66 AAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
15880310 GTCGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAA
131 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
15880375 GATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
196 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
15880440 CTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGTGTTCTCGAGGTTTGATGAGTGATAGGGGGC
261 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
** *
15880505 CAATATAAAAGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGCCCCCCCG
326 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCG
** * ** * *
15880570 ATCGTCGAAACCCCAATACCGTTTGTCAGGTTCTCCGGCGATGGTGTCCTGGA-AAAGAAAAATA
390 ATCACCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCC-CGACGAAGAAAAATA
* *
15880634 CGGA-ACCAGCACATGCCCGAGCCCAGCATGTTCTGTCGCAA-CC-C--T-CG---G-TC-----
454 C-GACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGTCCGATCTTAGA
* *
15880684 C----AAT---C-C--AAT-CTTAGACTGTGAATGAACTCTGTATGCCTAAGTCAACCCACGAAA
518 CTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAA
* * *
15880738 TGAGTGTGCGGGCGCTCAGCCGACCAGAGGGACGGGATGCGTAAGCCGAGGATCGACCGGGTCCC
583 TGAGTGTGCGGGCGCTCAGCCG-CCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCC
* ** *
15880803 CCTCTGCGTGCTG-CAGATCCTGCTGCTGCAACCCTCTGTCCGGTCTGATCTTA-TTCTGGAAAT
647 CCTCTGCGTGCTGTC-GATCCTGCTGC-GCAACCCTCAGTCCGGTCCAATCTTAGAT-TGGAAAT
* * * *
15880866 TAACTCTGTATGCCTAAGCCATCCAACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCTG
709 GAACTCTGTATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACGCAG
15880931 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
770 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
15880996 ATATTTCTGCCATGCCAA-AGCCATTTTTCTGGCTTGTAAATTCATACAATGG
835 ATATTTCTGCCATGCCAATA-CCATTTTTCTGGCTTGTAAATTCATACAATGG
**
15881048 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCA
1 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
* *
15881113 AAACTTTTTACCGTTCAAGATTTTTTAAAATTTTTGCAGAAGGAGTTTTGGCCCCAAACTTGGTA
66 AAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTA
* ** * * *
15881178 AACGTGATCCTTGTATTTTTGTTGGCACACACAAAAACATTCAGCTAAAAACTTGAAGTGTATAA
131 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
15881243 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
196 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
15881308 CTGTAAAATCTCAAATGCTCTTTAACGGGGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGAC
261 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * * * *
15881373 TAATATAAGGGCCAAGTACCAGCACCCATTGCGCATCATGTGTGCACACCCCCTGGCCCCCCGGA
326 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGA
** * * * * *
15881438 TCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCG
391 TCACCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACG
* * * * *
15881503 ACACCAGCACATGCCCGAGCCTAGCATGTGCTGCCACAAGCTTTGGTCCAGTCCGATCTTAGACT
456 ACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-GTCCGATCTTAGACT
*
15881568 GGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATG
520 GGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATG
* * *
15881633 AGTGTGCGGGCGCTCAGCCTGCCAGAGGGGCAGGATGCGCAAGCCAAGGATCGGTCGGGT-CCCC
585 AGTGTGCGGGCGCTCAGCC-GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCC
** **
15881697 TGCTGCGTGCTGTCGATCCTGCTGTCGCAACCCTCAGTTTGGTCCAATCTTAGATTGGGGATGAA
649 T-CTGCGTGCTGTCGATCCTGCTG-CGCAACCCTCAGTCCGGTCCAATCTTAGATTGGAAATGAA
* * * * * * *
15881762 CACTGTATGCGTAAGACAACCGACGAAACGAACGGGCGGGCGGGCGGGTACTACACAGGCTAGAG
712 CTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCAGGCCAGAG
* * * *
15881827 AGGCAGGATGTGCAAGCCGTGGATCAATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTC
777 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* ** *
15881892 TACTGTGTCAATACCATTTTTCTGGCTTGTAAATTCATACAATGG
842 TGCCATGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGG
* * **
15881937 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCAATTTTTCATAATTTTTG
1 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
* * * * *
15882002 GAACTTTTTACGGTTCAAGATTTTTTAAACTTTTTTCAGAAGGAGTTTTGGCCACAAACATGGCA
66 AAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
15882067 GACATGATCTTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
131 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
15882132 GATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
196 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
15882196 CTGTAAAATCTCAAATGCTCTTTAAGAGGGTGCGAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
261 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * * *
15882261 CAATATAAGGGCTAAATACCAGCACCCGTCGCACATCATGTGTGCTCACCCCCCCTGGCCCCCCC
326 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GGCCCCCCC
* ** *
15882326 GATCACCGAAACCCCAATGCCGTCGGCCAGGTTCTCCGGCGATGGTGTCCCGGTGAAAAAAAATA
389 GATCACCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATA
* * * * * *
15882391 TGGCACCAGCACTTGCTCGAGCCCAGCATGTGCTGTCGCAACCCCCGGTCCGATCCGATCTTAGA
454 CGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG-TCCGATCTTAGA
*
15882456 CTGAGAATGAACTCTGTAT
518 CTGGGAATGAACTCTGTAT
15882475 TTTTAGACAC
Statistics
Matches: 1998, Mismatches: 243, Indels: 106
0.85 0.10 0.05
Matches are distributed among these distances:
862 3 0.00
863 164 0.08
864 3 0.00
866 5 0.00
867 105 0.05
868 468 0.23
870 3 0.00
871 1 0.00
872 1 0.00
873 1 0.00
874 1 0.00
876 1 0.00
877 2 0.00
879 2 0.00
880 1 0.00
882 1 0.00
883 1 0.00
885 1 0.00
886 3 0.00
887 1 0.00
888 529 0.26
889 383 0.19
890 134 0.07
891 1 0.00
892 7 0.00
893 172 0.09
894 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (886 bp):
TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
AAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTA
GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGA
TCACCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACG
ACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGTCCGATCTTAGACTG
GGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGA
GTGTGCGGGCGCTCAGCCGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTC
TGCGTGCTGTCGATCCTGCTGCGCAACCCTCAGTCCGGTCCAATCTTAGATTGGAAATGAACTCT
GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCAGGCCAGAGAGGC
GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC
ATGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGG
Found at i:15882671 original size:26 final size:26
Alignment explanation
Indices: 15882642--15882694 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15882632 CCGGTCCGAT
*
15882642 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15882668 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15882694 C
1 C
15882695 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15884475 original size:26 final size:26
Alignment explanation
Indices: 15884446--15884498 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15884436 CTGATCCGAT
15884446 CTTAGACT-GGGAATGAACTCCGCATG
1 CTTAGA-TAGGGAATGAACTCCGCATG
*
15884472 CTTAGATAGGGAATGAACTCCGTATG
1 CTTAGATAGGGAATGAACTCCGCATG
15884498 C
1 C
15884499 CTAAGTGAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGATAGGGAATGAACTCCGCATG
Found at i:15885486 original size:26 final size:26
Alignment explanation
Indices: 15885448--15885500 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15885438 CTAGTTCGAT
15885448 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
15885474 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15885500 C
1 C
15885501 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15886377 original size:26 final size:26
Alignment explanation
Indices: 15886339--15886388 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
15886329 CCGGTCCGAT
* *
15886339 CTTAGGCTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15886365 CTTAGACTTGGAATGAACTCCATA
1 CTTAGACTGGGAATGAACTCCATA
15886389 AGCCTAAGTC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.30, C:0.18, G:0.22, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15887251 original size:26 final size:26
Alignment explanation
Indices: 15887222--15887274 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15887212 CCGGTCTGAT
*
15887222 CTTAGACT-GCGAATGAACTCTGTATG
1 CTTAGACTAG-GAATGAACTCCGTATG
15887248 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
15887274 C
1 C
15887275 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15888139 original size:26 final size:26
Alignment explanation
Indices: 15888103--15888153 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15888093 CGGTCCGTTC
15888103 TTAGACTGGGAATGAACTCCATATGG
1 TTAGACTGGGAATGAACTCCATATGG
*
15888129 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCATATG
15888154 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.16, G:0.27, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGG
Found at i:15889021 original size:26 final size:26
Alignment explanation
Indices: 15888985--15889037 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15888975 CCGGTCTGAT
15888985 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15889011 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15889037 C
1 C
15889038 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15889911 original size:26 final size:26
Alignment explanation
Indices: 15889875--15889927 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15889865 CCGGTCCGAT
*
15889875 CTTACACTGGGAATGAACTTCATATG
1 CTTACACTGGGAATGAACTCCATATG
*
15889901 CTTAGACTGGGAATGAACTCCATATG
1 CTTACACTGGGAATGAACTCCATATG
15889927 C
1 C
15889928 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCATATG
Found at i:15890814 original size:26 final size:26
Alignment explanation
Indices: 15890763--15890815 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15890753 CTGGTCCAAT
*
15890763 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15890789 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15890815 C
1 C
15890816 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15890975 original size:889 final size:887
Alignment explanation
Indices: 15885217--15891704 Score: 8917
Period size: 888 Copynumber: 7.3 Consensus size: 887
15885207 TTTTTCACGA
*
15885217 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
15885282 AGCACCCATCGCACATCATGTGCACACACTCCCCAG-CCCCCCGATCGCCGGAACCCTGC-A-GC
66 AGCACCCATCGCACATCATGTGCGCACAC-CCCCCGCCCCCCCGATCGCCGGAACCC--CAATGC
* * * * *
15885344 CG-CTGGTCAGGTTCACCGGCGATGGTGTCCCGACGAAAAAAAATGCGGCACCAGCAAATGCCCG
128 CGTC-AGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
* ** * * * *
15885408 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCTAGTTCGATCTTAGACTAGGAATGAACTCCGTAT
192 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATAT
* * *
15885473 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACAGGTGCTCAA
257 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA
* * * * *
15885538 CCGACCATAGGGGCGGGATGCGCCAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTACCGATC
322 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GGCGGGTCCCCCTCTGCGTGCTACCGATC
** * * *
15885603 CTGCTGCCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGGCTAAGCCA
386 CTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15885668 ACCGATGAAACGAGCGAGTGGGTGGGCGGGCGGGCACTACGTCGGCCAAAGAGGCGGGATGCGCA
451 ACCGACGAAACGAGC---T-GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCA
* * ** *
15885733 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCTGTGCCAATGG
512 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGC
* *
15885798 CATTTTTCTGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCATGTGAAGTCTCATGGCAAG
577 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* *
15885863 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTTG-GTATTTTTTAAAATTT
642 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAG-ATTTTTTAAAATTT
* * * *
15885927 TTTCAGAAGGAGTTTTGGCCCCAAACTAGGTAGACGTGATTCTTGTATTTTTGTTGGTATCCACA
706 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
15885992 AAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCAT
771 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
15886057 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCAATGCTC
836 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
*
15886109 TTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * *
15886174 AGCACCCATCGCACATCATGTGTGCACACCCCTCCG-TCCCCCGATCGCCGAAACCCCAATGCCG
66 AGCACCCATCGCACATCATGTGCGCACACCCC-CCGCCCCCCCGATCGCCGGAACCCCAATGCCG
* * *
15886238 TCGGTCAGGTTCTTCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATG-CCGAGC
130 TCAGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGC
* * *
15886302 CCAGCAAGTGCTGTCGTAACCCTCGGTCCGGTCCGATCTTAGGCTGGGAATGAACTTCATATGCT
195 CCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATATGCT
* * *
15886367 TAGACTTGGAATGAACTCCATAAGCCTAAGTCAACCCACGAAAC-AGCGTGCGGGCGCTCAACCG
260 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCG
* * * ** * ** *
15886431 GCCAGAGGGGCAGGATGCGCAAGCCGGGGATCAGCCAGGTCCCTATCTGCATGCTGTCGATCATG
325 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GGCGGGTCCCCCTCTGCGTGCTACCGATCCTG
* * * * * * * *
15886496 CTGCCATAACTCTTGATTCAGT-TCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCGAAC
389 CTGCCGTAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * *
15886560 CGACGAAACGAACT----GGCGGGCGGGCACCACGCCGGCCAGAGAGACGGGATGCGCAAGCCAT
453 CGACGAAACGAGCTGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* *
15886621 GGATCGATAGAGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA-TTT
518 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
* *
15886685 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCAAGACGACC
583 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * *
15886750 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTTAGA
648 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
* * * *
15886815 ATGAGTTTTGGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTAGCATGCATAAAAAAAT
713 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * * *
15886880 TCAGCTAAAAACTCGAACTGTACAAGATTTTTTGTCCATTTGAAAAAATTGTCCCTATTTCAGAC
778 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
15886945 ACTTTAATGGCTACTGGAAGCAAACCTGTAAAATCTCAAATGCTC
843 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
15886990 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* ** ***
15887055 AGCACCTATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCATCGGAACCCCAATTTTG
66 AGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGCCGGAACCCCAATGCCG
* * * **
15887120 TC-GATCAGGTTCTCCGACGGTGGTGTCCCGACGAAGAAAAATATGATACCAGCACATGCCCGAG
130 TCAG-TCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* * * * *
15887184 CCCAACATGTGTTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGCGAATGAAC-TCTGTATG
194 CCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTC-ATATG
* * * *
15887248 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGTGCACTCAAC
258 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * *
15887313 CAGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCTGGGTCCCCCTCTGTGTGCTACC-AGTC
323 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGC-GGGTCCCCCTCTGCGTGCTACCGA-TC
** * * *
15887377 CTGCTATCGTAACCCTCGGTCTGGTCTGATCTTAGACTTGTAATGAACTCCGTATGCCTAAGCCA
386 CTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
15887442 ACCGACAAAACGAGC-GGGGGGTGGGCGGGCACTACGTCGGCCAGAGTGGCGGAATGCGCAAGGC
451 ACCGACGAAACGAGCTGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
15887506 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
516 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* *
15887571 TTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAGGTTTCATGGCAAGACGA
581 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* *
15887636 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACTGTTCGAGATTTTTTAAAATCTTTTCA
646 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * * * *
15887701 GAAGGAGTTTTGACCCCAAACTTGGTAGAAGTGATCATTGTATTTTTCTTGGCATGCACAAAAAC
711 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
15887766 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
776 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
15887831 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTT
841 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * *
15887878 TTTAAGGGGGTTTGAGTTCTCGAGGTTTTATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
15887943 AGC-CCCAATCGCACATCATGTGCGTC-CA-----C-CCCCCCCGATCG-CTGAAACCCAATGCC
66 AGCACCC-ATCGCACATCATGTGCG-CACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCC
** * * * * ** * *
15887999 ACCGGTCAGGGTCTCCGACGATGGTGTCCAGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAG
129 GTCAGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* * * * * *
15888064 CCAAGTATGTGCTGCCGCAACCCTCGGTCCGGTCCGTTCTTAGACTGGGAATGAACTCCATATGG
194 CCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATATGC
*
15888129 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
259 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACC
** * **
15888194 GGCCAGAGTAGCGGGATGCACAAGCCGGGGATCGGCCAGTCCCCCTCTGCGTGCTACCGATCCTG
324 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCGGGTCCCCCTCTGCGTGCTACCGATCCTG
* * * *
15888259 TTGCCGTAACCCTTGGTCAGGTCTGATCTTAGACTGGGAATGAACTCCGTACGCCTAAGCCAACC
389 CTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * ** *
15888324 CATGAAACGA----GCGGGCGGATGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
454 GACGAAACGAGCTGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
* *
15888385 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATACCATTTTT
519 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
* *
15888450 CTGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCATGTAAAGTTTCATGGCAAGACGACTC
584 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* ** * *
15888515 GATTTCTATTTTTCACGATTTTCAAAAC-TTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAA
649 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAA
* * * **
15888579 GGAGTTTTGGCCCCAAACTTGGTTGACGTGATCGTTGTATTTTTTTTGGCATGCTTAAAAAAATT
714 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * * *
15888644 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTTATCATTTAAAAAAAGTGTCCCTATTTCGGACA
779 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
15888709 CTTTAATGTCTACTGGCAACAAACCTGTAAAATCTCCATTGCTC
844 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
15888753 TTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
15888818 AGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCTCAATCGTCGGAACCCCAATGACG
66 AGCACCCATCGCACATCATGTGCGCACACCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCCG
* * ** * * *
15888883 CCAGTCAGGTTCTCTGGCGATGGTGTCCCGGTGAAGAAAAATATGACACCAGCACATGCCTGAGC
130 TCAGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGC
* ** * ** * *
15888948 CCAGCTTGTGCTACCGCAACCGTTAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCT
195 CCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATATGCT
* * * *
15889013 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACAAGCGTGCGGGCGCTCAGCCT
260 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCG
* * * * * * ** * *
15889078 GCCAGAAGGGCAGGATGCGCAAGCCAGGGATCGACCAGGTCCTCCTCTGCGTGCTGTCAATCCTA
325 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG-GCGGGTCCCCCTCTGCGTGCTACCGATCCTG
* * **
15889143 CTACCGTAACCCTTGGTCCGGTCCAATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACC
389 CTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* *
15889207 AACGAAACGAGCGGGTGGGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGCGCAAGC
454 GACGAAACGAGC---T-GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
15889272 CATGGATCGATAGGGTGGAAGGTGGGTTTAGGCACATCTTCATATTT-TTCCATGCCAATGCCAT
515 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
*
15889336 TTTTCTGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
580 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * * *
15889401 ACTCATTTTCTATTTCTCATGATTTTTGAAA-TTTTTACAGTT-TAGGATTTTTTAAAATTTTTT
645 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTT
* ** * *
15889464 CAGAAGTAGTTTTAACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGAATGCACAAAA
709 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
15889529 CAATTCAGCTAAAAACTCGATGTGTACAAGATTTTGTGACCATTTGAAAATAGTGTCCCCATTTC
774 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15889594 AGACACTTTAATGGTTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
839 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* *
15889643 TTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * ** *
15889708 AGCACCCATCGCACATCATGTGCGCACACTCCCCAGCCCCCCCGATCGTCGGAACCTTAATGTCG
66 AGCACCCATCGCACATCATGTGCGCACAC-CCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCG
* * ** * *
15889773 T-AGGTCAGGTTCTCCGGCGATGGTGTCCCGGCAAAGAAAAATACGAAACCAACACATGCTCGAG
130 TCA-GTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* *
15889837 CCCAGCATGTGCTGTCGTAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTTCATATGC
194 CCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATATGC
* * ** *
15889902 TTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAATAAGCCTGCGGGCGCTCAACC
259 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACC
* * * * * * ** *
15889967 GGCCAGAGGGGCGGGATGCGGAAGCCAGGGATAGGCCGGCCCCCCACTGCGTGCTGTCGATCCTA
324 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCGGGTCCCCCTCTGCGTGCTACCGATCCTG
** * * * * *
15890032 CTGTTGCAACCCTCGGTTCAG-CTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAT
389 CTGCCGTAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * *
15890096 CGACGAAAGGAGCTAGCGGACGGGCGGGCACTATGTCAGCCAGAGAGGCGGGATGCGCAAGCCGT
453 CGACGAAACGAGCTGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* * *
15890161 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTACCGTGCCAATGCCATTTT
518 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
* *
15890226 TTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGCAAGACGACT
583 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * * *
15890291 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCGAGATTTTTTAAATTTTTTTCGGA
648 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
* * * * * * *
15890356 AGGATTTTTGGCCCTAAACTTGGCAGATGTGGTCCTTGTATTTTTTTTGGAATGCACAAAAAAAT
713 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
15890421 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAC
778 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
15890486 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
843 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * *
15890531 TTTAAGGGGGTGTGAGTTCTGGAGGTTTGATGGGGGATAGAGGGCCAATATAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
** * *
15890596 AAAACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTCGATCGCCGGAACCCTAATACC
66 AGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCC-CGATCGCCGGAACCCCAATGCC
* *
15890661 GTCAGTCAGGTTCTCCGGCGATGGTGTCTCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
129 GTCAGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* *
15890726 CCCAGCATGT-CTGTCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTTCATATGC
194 CCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATATGC
**
15890790 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTC
259 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACC
* * * *
15890855 GGCCAGAGGGGCGGGATCCGCAAGCCGAGGATCGGTCGGGCCCCCCTCTGGGTGCTACCGATCCT
324 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG-CGGGTCCCCCTCTGCGTGCTACCGATCCT
* * * *
15890920 GCTGCCGTAACCCTCAGTCCGGTTTGATCTTAGACTGGGAATGAACTGCGTATGCCTAAGCCAAT
388 GCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * *
15890985 CGACGAAACGAGC-GGACGGGCGGGCGGGTACTACGCCGGCCAGAGAGGCGGCG-TGTGTAAGCT
453 CGACGAAACGAGCTGG-CGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGG-GATGCGCAAGCC
15891048 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
516 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
15891113 TTGT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATTTGAAGTTTCATGGCAAGACG
581 TT-TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* ** * * *
15891177 ACTCGTTTTTTATTTTTCACGATTTTCCAAGCTTTTTATGGTTCGAGATTTTTTAAACTTTTTTC
645 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
*
15891242 AGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAC
710 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-
*
15891306 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTCCCCATTTC
774 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15891371 AGACACTTTAATGTCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
839 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * ** *
15891420 TTTCAGGGGGTGTGAGTTCTCCAGGTTTGATGAGGGATAACGGGCCAATATAAGGGCCAAGTAAC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * * *
15891485 AGCACCCATCGCACATCAT-TGTGCACACCCCCCCGACCCCCCTGATCGTCGAAACCCCAATGCT
66 AGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCC
* * * * * *
15891549 GCCAGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACAGCACAAGCACATGCCCCAA
129 GTCAGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* ** *
15891614 CCCAGCATGTGCTG-CTGCAACCCTCGGTCCGGTCTGATCTTAGACAAGGAATGAACTTCGTATG
194 CCCAGCATGTGCTGTC-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATATG
*
15891678 CTTAGACTGGGAATGAACTTCGTATGC
258 CTTAGACTGGGAATGAACTCCGTATGC
15891705 TTAGACGGGT
Statistics
Matches: 4957, Mismatches: 573, Indels: 135
0.88 0.10 0.02
Matches are distributed among these distances:
874 1 0.00
875 270 0.05
876 195 0.04
879 88 0.02
880 208 0.04
881 389 0.08
882 181 0.04
883 354 0.07
884 179 0.04
885 1 0.00
886 89 0.02
887 212 0.04
888 888 0.18
889 763 0.15
890 773 0.16
891 199 0.04
892 166 0.03
893 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (887 bp):
TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
AGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGT
CAGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCC
CAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCATATGCTT
AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGG
CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCGGGTCCCCCTCTGCGTGCTACCGATCCTGCT
GCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
CGAAACGAGCTGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGG
AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
Found at i:15891690 original size:26 final size:26
Alignment explanation
Indices: 15891652--15891710 Score: 100
Period size: 26 Copynumber: 2.3 Consensus size: 26
15891642 CCGGTCTGAT
15891652 CTTAGACAAGGAATGAACTTCGTATG
1 CTTAGACAAGGAATGAACTTCGTATG
**
15891678 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACAAGGAATGAACTTCGTATG
15891704 CTTAGAC
1 CTTAGAC
15891711 GGGTGGGCAC
Statistics
Matches: 31, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 31 1.00
ACGTcount: A:0.31, C:0.17, G:0.24, T:0.29
Consensus pattern (26 bp):
CTTAGACAAGGAATGAACTTCGTATG
Found at i:15892389 original size:26 final size:26
Alignment explanation
Indices: 15892360--15892412 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15892350 CTGGTCCGAT
* * *
15892360 CTTAGATTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15892386 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15892412 C
1 C
15892413 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15893454 original size:887 final size:892
Alignment explanation
Indices: 15891715--15893490 Score: 2676
Period size: 887 Copynumber: 2.0 Consensus size: 892
15891705 TTAGACGGGT
* * *
15891715 GGGCACTACGCCGGCCAAAGAGGCGGGATGCATAAGTCGTGGATCGATAGGGTGGTAGGTGAGTT
1 GGGCACTACGCCGGCCAAAGAGGCGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGATGAGTT
* * *
15891780 TAGGCACATCTTCACATTTTTGCCATGCCAATGCTATTTTTCTGGCTTCTAAACTCATACAATGG
66 TAGGCACATCTTCACATTTCTGCCATCCCAATGCCATTTTTCTGGCTTCTAAACTCATACAATGG
* *
15891845 TCCCTCAAGCCTTCATGTGAGTTTCATGGCAAGACGACTCGTTTTTCTATTTTTCATGATTTTTG
131 TCCCTCAAGCCTTCACGTGAGTTTCATGGCAAGACGACTCATTTTTCTATTTTTCATGATTTTTG
15891910 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGAAGTTTTACCCCAAAACTTGGTA
196 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGAAGTTTTACCCCAAAACTTGGTA
* *
15891975 GACGTGATCCTTGTATTTTTGTTGGCATCCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAA
261 GACGTGATCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCGAAGTCTACAA
*
15892040 GATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAAC
326 GATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAAC
* * * *
15892105 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGCGGGATAGGGGGC
391 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTAAAGAGGGATACGGGGC
*
15892170 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACACCCCCCGGTGCCCCC
456 CAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACACCCCCCGGTGCCCCC
* * * * *
15892235 CGATCGCCGGAACCCCAATGCCGCCGGTGAGGTTCTCCGGCGATGGTGCCCCTCAAAAGCAAAAT
521 CGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCCGCGATGGTGCCCCACAAAAGAAAAAT
* * ** *
15892300 GCCGCACTAGCACATGCTCGATTCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCCGATCTTAG
586 GCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAG
* *
15892365 ATTGGTAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAA
651 ACTGGTAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAA
* * * * * * *
15892430 ACAAGCGTACGGGTGTTCAGCCGCCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCC
716 ACAAGCGTACGGGCGCTCAACCGCCCAGAGGGACAGGATGCGCAAGCCGAGGATCAACCAGGTCC
* * * *
15892495 CCGTCTGCATGCTACCGATCCTGTTGCCGCAACCTTCAGTCTGGTCCGATCTTAGACTGGGAATG
781 CCCTCTGCATGCGACAGATCCTGTTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATG
* * * *
15892560 AACTCCGTATGCCTAAGCCAACGGATGAAACGAGTGGGTGGGCAGGC
846 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGC
* * * * * *
15892607 GGGCATTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGTATCGATAGGGTGGTCGATGGGTT
1 GGGCACTACGCCGGCCAAAGAGGCGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGATGAGTT
* * *
15892672 TAGGCACATCTTCATATTTCTGCCATCCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGG
66 TAGGCACATCTTCACATTTCTGCCATCCCAATGCCATTTTTCTGGCTTCTAAACTCATACAATGG
*
15892737 TCTCTTC-AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTT-TATTTTTCATGATTTT
131 TC-CCTCAAGCCTTCACGTG-AGTTTCATGGCAAGACGACTCATTTTTCTATTTTTCATGATTTT
* * *
15892800 TGAAACTTTTTACGGTTCGAGA-TTTTT-CAATTTTTTCAGAAGGAGTTTTGA-CCCAAACCTTG
194 TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGAAGTTTT-ACCCCAAAACTTG
* * * *
15892862 GTATATGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTCTA
258 GTAGACGTGATCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCGAAGTCTA
*
15892927 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCA
323 CAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCA
*
15892992 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTAAAGAGGGATACGG
388 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTAAAGAGGGATACGG
* *
15893057 GGCCAATATAAGGGCCAAGTACCAGTACCCATCACATATCATGTGCGCACAC-CCCCCC-G-GCC
453 GGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACACCCCCCGGTGCC
* * * *
15893119 CCCCGATCGTCGGAACCCCAATGCCATCGGTCAGGTTCTCCCGCGATGGTGTCCCGAC-GAAGAA
518 CCCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCCGCGATGGTG-CCCCACAAAAGAA
15893183 AAATG-CGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGAT
582 AAATGCCG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGAT
* *
15893247 CTTAGACTGAG-AATGAACTCCATATGCTTAGACTGGGAATGAACTGCGTATGCCTAAGTCAACC
646 CTTAGACTG-GTAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACC
* ** * *
15893311 CACGAAACGAGCGTGTGGGCGCTCAACCGGCCAGAGGGACGGGATGCGCAAGCCGAGGATCAACC
710 CACGAAACAAGCGTACGGGCGCTCAACCGCCCAGAGGGACAGGATGCGCAAGCCGAGGATCAACC
* * * * *
15893376 AGGTCCCCCTCTGCGTGCGGCATATCCTGTTGCCGTAACCCTCGGT-TCGGTCCGATCTTAGACT
775 AGGTCCCCCTCTGCATGCGACAGATCCTGTTGCCGCAACCCTCAGTCT-GGTCCGATCTTAGACT
*
15893440 GGGAATGAACTCCGTATGCCTAAGCCATCCGACGAAACGAGCGGGCGGGCA
839 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCA
15893491 CTAAACCAGC
Statistics
Matches: 796, Mismatches: 81, Indels: 19
0.89 0.09 0.02
Matches are distributed among these distances:
886 3 0.00
887 319 0.40
888 6 0.01
889 6 0.01
890 261 0.33
891 6 0.01
892 166 0.21
893 29 0.04
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (892 bp):
GGGCACTACGCCGGCCAAAGAGGCGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGATGAGTT
TAGGCACATCTTCACATTTCTGCCATCCCAATGCCATTTTTCTGGCTTCTAAACTCATACAATGG
TCCCTCAAGCCTTCACGTGAGTTTCATGGCAAGACGACTCATTTTTCTATTTTTCATGATTTTTG
AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGAAGTTTTACCCCAAAACTTGGTA
GACGTGATCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCGAAGTCTACAA
GATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAAC
CTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTAAAGAGGGATACGGGGC
CAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACACCCCCCGGTGCCCCC
CGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCCGCGATGGTGCCCCACAAAAGAAAAAT
GCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAG
ACTGGTAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAA
ACAAGCGTACGGGCGCTCAACCGCCCAGAGGGACAGGATGCGCAAGCCGAGGATCAACCAGGTCC
CCCTCTGCATGCGACAGATCCTGTTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATG
AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGC
Found at i:15893514 original size:159 final size:159
Alignment explanation
Indices: 15893273--15893648 Score: 470
Period size: 159 Copynumber: 2.4 Consensus size: 159
15893263 ACTCCATATG
* * * * * * *
15893273 CTTAGACTGGGAATGAACTGCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGGCACTAAAC
*
15893338 CGGCCAGAGGGACGGGATGCGCAAGCC-GAGGATCAACCAGGTCCCCCTCTGCGTGCGGC-ATAT
66 CAGCCAGAGGGACGGGATGCGCAAGCCAG-GGATCAACCAGGTCCCCCTCTGCGTGCGGCGA-AT
** * * ** * *
15893401 CCTGTTGCCGTAACCCTCGGTTCGGTCCGAT
129 CCTACTACCGCAACCCTCAATCCAGTCCGAT
* *
15893432 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCATCCGACGAAACGAGCGGGCGGGCACTAAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGGCACTAAAC
* * ** *
15893497 CAGCCAGAGAGG-TGGGATGCGCAAGCCAGGGATCGACTGGGTCCCCCTCTGCGTGCTGCGAATC
66 CAGCCAGAG-GGACGGGATGCGCAAGCCAGGGATCAACCAGGTCCCCCTCTGCGTGCGGCGAATC
*
15893561 CTACTACCGCAACCCTCAATCCAGTCTGAT
130 CTACTACCGCAACCCTCAATCCAGTCCGAT
* *
15893591 ATTAGACTGGGAATGAACTCCGTATTCCTAAGCCAACCGACGAAACGAGCGGGAGGGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGGC
15893649 GGTCGGGCAC
Statistics
Matches: 187, Mismatches: 27, Indels: 6
0.85 0.12 0.03
Matches are distributed among these distances:
159 183 0.98
160 4 0.02
ACGTcount: A:0.24, C:0.30, G:0.29, T:0.17
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGAGGGCACTAAAC
CAGCCAGAGGGACGGGATGCGCAAGCCAGGGATCAACCAGGTCCCCCTCTGCGTGCGGCGAATCC
TACTACCGCAACCCTCAATCCAGTCCGAT
Found at i:15895907 original size:891 final size:888
Alignment explanation
Indices: 15893432--15896313 Score: 4005
Period size: 886 Copynumber: 3.2 Consensus size: 888
15893422 TCGGTCCGAT
* * * * * *
15893432 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCATCCGACGAAACGAGCGGGCGGGCACTAAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* ** * *
15893497 C-AGCCAGAGAGGTGGGATGCGCAAGCCAGGGATC-GACTGGGTCCCCCTCTGCGTGCTG-CGAA
66 CGA-CCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGAC-GGGTCCCCCTCTACGTGCTGCCG-A
* * * * * *
15893559 TCCTACTACCGCAACCCTCAATCCAGTCTGATATTAGACTGGGAATGAACTCCGTATTCCTAAGC
128 TCCTGCTACCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
15893624 CAACCGACGAAACGAGCGGGAGGGCGGTCGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAGG
193 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGTAAG
15893689 TCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCA
258 TCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCA
* *
15893754 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTCAGCCTTCATGTGAAGTTTCATGGCAAGAC
323 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
** ** * * *
15893819 GACTTGTTTTCTATTTTTCACCATTTTTGAAACTTTTTACGGTTTGGGATTTGTTAAAATTTTTT
388 GACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTT-TTTAAATTTTTT
* * * * * *
15893884 CAGCAGGATTTTTTGCCCCAAACTTGGTTGACGTGATCCTCGTATTTTTTTTGGCATGCACAAAA
452 CAGAAGGA-GTTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* **
15893949 AAATTCAGTTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
516 AAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15894014 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGCGGTGTGAG
581 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15894079 TTCTCAAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
646 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
15894144 CATGTGCGCACA--CCCCTCGGGCCCCCCCGATCGTCAGAACCCCGATGCTGTCGGTCAGGTTCT
711 CATGTGCGCACACGCCCCCCGAG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * * *
15894207 -CTAGCGATGGTGTCTCGGCAAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
775 CCGA-CGATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * *
15894271 GCCGCAACCCTCGGTCCGGTCTGATCTTAGATTGGGAATGAACTTCGTATG
839 GCCGTAACCCTCGGTCCAGTCTGATCTTAGATT-GGAATGAACTCCGTATG
* * * *
15894322 CTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * * * * **
15894387 TGGCCAAAAGGG-AGGGATGCACAAGCCGGGGATC-GACCGGGTCCCCCTCTACGCGCTGTAGAT
66 CGACCAGAGGGGCA-GGATGCGCAAGCCGGGGATCGGA-CGGGTCCCCCTCTACGTGCTGCCGAT
* * *
15894450 CCTGCTACCATAACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
129 CCTGCTACCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * ** *
15894515 AACCAATGAAACGA----GCAGACGGGCGGGCACTACACCGGCCAAAGAGGCGGGATGCGTAAGT
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGTAAGT
* * * *
15894576 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCTAG
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCAT
* *
15894641 TTTTCTGGCTTGTAAACTCATACAATGGTCCCTCAAGCCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
*
15894706 ACTCATTTTCTATTTTTCATGATTTTCGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
389 ACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAATTTTTTC
* *
15894771 AGAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATCCACAAAAC
453 AGAAGGAGTTTTGGCCC-AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
15894836 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
517 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
15894901 AACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGT
582 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
15894966 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGCCCAAGTACCAGCACCCATCGCACATC
647 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
15895031 ATGTGCGCACACGCCCCCCGATGCCCCCCGATCGTTGGTACCCCAATGCCGCCGGTGAGGTTCTC
712 ATGTGCGCACACGCCCCCCGA-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* ** * * * * ** *
15895096 CGACGATGGTGCCCCTCCAAAGCAAAATGCCGCACCAGCACATGCCTGATTCCAGCATGTGCTAC
776 CGACGATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
*
15895161 CGTAACCCTCGGTCCAGTCCGATCTTAGATTGGTAATGAACTCCGTATG
841 CGTAACCCTCGGTCCAGTCTGATCTTAGATTGG-AATGAACTCCGTATG
* * * *
15895210 CTTAGACTGAGAATGAACTCCATATGCCTAAGTCAACCCACGAAACAAGCGTACGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * * * *
15895275 CGACCAGAGGGGCAGGATACGCAAGCCGGGGATCGGTCGGGTCCCCGTCTGCATGCTACCGATCC
66 CGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGACGGGTCCCCCTCTACGTGCTGCCGATCC
* * * * * **
15895340 TGTTGCCGCAACCTTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
15895405 CCGATGAAACGAGCGGGCGGGCGGGCGGGCATTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGTAAGTCG
* * *
15895470 TGTATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTTTGCCATCCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCATTT
* * * *
15895535 TTCTGGCTTGTAAATTCATACAATGGTCCCTTTAGCCTTCACGTGAAGTTTCATGGGAAGATGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
*
15895600 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTCAATTTTTTCAGA
391 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAATTTTTTCAGA
* *
15895665 AAGAGTTTTGGCCCAAACCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTACAAAAAAAT
456 AGGAGTTTTGGCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
15895730 TCAGCTAAAAACTCAAAGTCTACAAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
520 TCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
15895795 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
585 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
15895860 CGAGGTTTAAAGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
650 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* *
15895925 TGCG--CACGTCCCCCCGA-CCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCTGA
715 TGCGCACACG-CCCCCCGAGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
**
15895987 CGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT
779 CGATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT
** ** * *
15896052 AACCCTCTTTCTTGTCTGATCTTAGACTGAGAATGAACTCCATATG
844 AACCCTCGGTCCAGTCTGATCTTAGATTG-GAATGAACTCCGTATG
* * *
15896098 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTTAACCCACAAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * * * * * * * * *
15896162 CGGCCAGAGGGACGGGATGCGCAAGCTGAGGATTGGGCAGGTACCCCTCTACGTGCGGCCTATCC
66 CGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGACGGGTCCCCCTCTACGTGCTGCCGATCC
* *
15896227 TGCTACCATAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
15896292 CCGACAAAACGAGCGGGCGGGC
196 CCGACGAAACGAGCGGGCGGGC
15896314 ACTAAGCCAG
Statistics
Matches: 1749, Mismatches: 223, Indels: 43
0.87 0.11 0.02
Matches are distributed among these distances:
885 10 0.01
886 458 0.26
887 176 0.10
888 442 0.25
889 10 0.01
890 182 0.10
891 262 0.15
892 209 0.12
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (888 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
CGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGACGGGTCCCCCTCTACGTGCTGCCGATCC
TGCTACCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGTAAGTCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAATTTTTTCAGA
AGGAGTTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACGCCCCCCGAGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
ATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA
CCCTCGGTCCAGTCTGATCTTAGATTGGAATGAACTCCGTATG
Found at i:15896115 original size:25 final size:26
Alignment explanation
Indices: 15896072--15896123 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
15896062 CTTGTCTGAT
15896072 CTTAGACTGAGAATGAACTCCATATG
1 CTTAGACTGAGAATGAACTCCATATG
*
15896098 CTTAGACTG-GAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCATATG
15896123 C
1 C
15896124 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 16 0.64
26 9 0.36
ACGTcount: A:0.31, C:0.21, G:0.21, T:0.27
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCATATG
Found at i:15896411 original size:159 final size:158
Alignment explanation
Indices: 15896098--15896472 Score: 435
Period size: 159 Copynumber: 2.4 Consensus size: 158
15896088 ACTCCATATG
** * * * *
15896098 CTTAGACTGGAATGAACTCCGTATGCCTAAGTTAACCCACAAAACGAGCGTGCGGGCGCTCAGCC
1 CTTAGACTGGAATGAACTCCGTATGCCTAAGCCAACCAACAAAACGAGCGGGCGGGCACTAAGCC
* * * * ** *
15896163 GGCCAGAGGGACGGGATGCGCAAGCTGAGGATTGGGCAGGTACCCCTCTACGTGCGGCCTATCCT
66 AGCCAGAGAGACGGGATGCGCAAGCCGAGGATCGACCAGGTACCCCTCTACGTGCGGCCGATCCT
* * **
15896228 GCTACCATAACCCTCGGTCCGGTCTGAT
131 ACTACCACAACCCTCAATCCGGTCTGAT
*
15896256 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAACGAGCGGGCGGGCACTAAGC
1 CTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCAACAAAACGAGCGGGCGGGCACTAAGC
* * * * * * *
15896321 CAGCCAGAGAGCCGGGATGCGTAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
65 CAGCCAGAGAGACGGGATGCGCAAGCCGAGGATCGACCAGGTACCCCTCTACGTGCGGCCGATCC
* * *
15896386 TACTACCGCAACCTTCAATCTGGTCTGAT
130 TACTACCACAACCCTCAATCCGGTCTGAT
* * * * *
15896415 CCTAGACTAGGAATGAACTCCGTATTCCTAAGCCAACCAACGAAATGAGCGGGTGGGC
1 CTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCAACAAAACGAGCGGGCGGGC
15896473 GGGCGAGCGC
Statistics
Matches: 182, Mismatches: 34, Indels: 1
0.84 0.16 0.00
Matches are distributed among these distances:
158 8 0.04
159 174 0.96
ACGTcount: A:0.24, C:0.30, G:0.28, T:0.18
Consensus pattern (158 bp):
CTTAGACTGGAATGAACTCCGTATGCCTAAGCCAACCAACAAAACGAGCGGGCGGGCACTAAGCC
AGCCAGAGAGACGGGATGCGCAAGCCGAGGATCGACCAGGTACCCCTCTACGTGCGGCCGATCCT
ACTACCACAACCCTCAATCCGGTCTGAT
Found at i:15897150 original size:26 final size:26
Alignment explanation
Indices: 15897121--15897173 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15897111 CCGGTCCGAT
15897121 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
*
15897147 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
15897173 C
1 C
15897174 CTAAATCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTATG
Found at i:15898049 original size:26 final size:25
Alignment explanation
Indices: 15898011--15898072 Score: 81
Period size: 26 Copynumber: 2.4 Consensus size: 25
15898001 CATAGTCCGA
15898011 TCCG-ATCCTAGACTGGGAAAGAAC
1 TCCGTATCCTAGACTGGGAAAGAAC
* *
15898035 TCCGTATCCTTAGACTGGGGATGAAC
1 TCCGTATCC-TAGACTGGGAAAGAAC
15898061 TCCGTATGCCTA
1 TCCGTAT-CCTA
15898073 AGTCAACCCA
Statistics
Matches: 33, Mismatches: 2, Indels: 4
0.85 0.05 0.10
Matches are distributed among these distances:
24 4 0.12
25 4 0.12
26 23 0.70
27 2 0.06
ACGTcount: A:0.26, C:0.26, G:0.24, T:0.24
Consensus pattern (25 bp):
TCCGTATCCTAGACTGGGAAAGAAC
Found at i:15898948 original size:26 final size:26
Alignment explanation
Indices: 15898909--15898958 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
15898899 CGGTTTGATG
* *
15898909 TTAGACTGGGAATGAACTTCGTATAC
1 TTAGACTGGAAATGAACTCCGTATAC
15898935 TTAGACTGGAAATGAACTCCGTAT
1 TTAGACTGGAAATGAACTCCGTAT
15898959 GCCTAAGTCA
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.16, G:0.22, T:0.30
Consensus pattern (26 bp):
TTAGACTGGAAATGAACTCCGTATAC
Found at i:15899802 original size:26 final size:26
Alignment explanation
Indices: 15899773--15899824 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
15899763 TGATCCGATT
*
15899773 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCATATGC
15899799 TTAGACTGGGAATGAACTCCATATGC
1 TTAGACTGGGAATGAACTCCATATGC
15899825 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGC
Found at i:15901566 original size:26 final size:26
Alignment explanation
Indices: 15901537--15901589 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15901527 CCGGTCTGAT
15901537 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15901563 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15901589 C
1 C
15901590 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15902298 original size:26 final size:26
Alignment explanation
Indices: 15902269--15902321 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15902259 CCGGTCCGGT
* * *
15902269 CTTAGATTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15902295 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15902321 C
1 C
15902322 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15903192 original size:25 final size:26
Alignment explanation
Indices: 15903149--15903200 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
15903139 CTGGTCTAAT
15903149 CTTAGACTGAGAATGAACTCCATATG
1 CTTAGACTGAGAATGAACTCCATATG
*
15903175 CTTAGACTG-GAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCATATG
15903200 C
1 C
15903201 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 16 0.64
26 9 0.36
ACGTcount: A:0.31, C:0.21, G:0.21, T:0.27
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCATATG
Found at i:15903404 original size:159 final size:158
Alignment explanation
Indices: 15903177--15903543 Score: 443
Period size: 159 Copynumber: 2.3 Consensus size: 158
15903167 TCCATATGCT
* * * * * * *
15903177 TAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGG
1 TAGACTGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCACTAAGCCAG
* * * * * *
15903242 CCAGAG-GGATGGGATGCGCATGCGGAGGATCGACC-AGGTCCCCCTCTACGTG-TGGCCTATCC
66 CCAGAGAGG-CGGGATACGCAAGCCGAGGATCAACCGA-GTCCCCCTCTACGTGCT-GCCGATCC
** ** * *
15903304 TACTGTCGTAACCCTCGGTTTGGTCTGATCT
128 TACTACCGTAACCCTCAATCTGGTCTGATCC
**
15903335 TCTACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCACTAAGCCA
1 TAGACTG-GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCACTAAGCCA
15903400 GCCAGAGAGGCGGGATACGCAAGCCGAGGATCAACCGAGTCCCCCTCTACGTGCTGCCGATCCTA
65 GCCAGAGAGGCGGGATACGCAAGCCGAGGATCAACCGAGTCCCCCTCTACGTGCTGCCGATCCTA
*
15903465 CTACCGTAACCTTCAATCTGGTCTGATCC
130 CTACCGTAACCCTCAATCTGGTCTGATCC
* * *
15903494 TAGACTGGGAATGAACTCCGTATTCCTAAGCCAATCGACGAAATGAGCGG
1 TAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
15903544 ATTGGCGGGC
Statistics
Matches: 177, Mismatches: 27, Indels: 9
0.83 0.13 0.04
Matches are distributed among these distances:
158 5 0.03
159 167 0.94
160 5 0.03
ACGTcount: A:0.25, C:0.29, G:0.27, T:0.19
Consensus pattern (158 bp):
TAGACTGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCACTAAGCCAG
CCAGAGAGGCGGGATACGCAAGCCGAGGATCAACCGAGTCCCCCTCTACGTGCTGCCGATCCTAC
TACCGTAACCCTCAATCTGGTCTGATCC
Found at i:15904227 original size:26 final size:26
Alignment explanation
Indices: 15904198--15904250 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15904188 CCGGTTCGAT
15904198 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15904224 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15904250 C
1 C
15904251 CTAAGTCAAA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15904502 original size:185 final size:185
Alignment explanation
Indices: 15904177--15904594 Score: 629
Period size: 185 Copynumber: 2.3 Consensus size: 185
15904167 TGTGCTGTCG
*
15904177 CAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
*
15904242 TCCGTATGCCTAAGTCAAACCACGAAACGAGCATGCAGGCGCTCAGCCGGCCAGAGGGGCCAGAT
66 TCCGTATGCCTAAGTCAAACCACGAAACGAGCATGCAGGCGCTCAGCCGACCAGAGGGGCCAGAT
* * *
15904307 GCGTAAGTCGGGGATCGATCGGATCCCCCTCTGCGTGCTGTCAATCCTGCTACCG
131 GCGCAAGTCGGGGATCGATCGGATCCCCCTCTGCATGCTGTCAATCCTGCTACCC
* * * *
15904362 TAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTTGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * **
15904427 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGACCAGAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAAACCACGAAACGAGCATGCAGGCGCTCAGCCGACCAGAGGGGCCAGAT
* * * *
15904492 GCGCAAGTCGGGGATCGGTCGGATCCCCCTCTGCATGCTGTCGATCTTGCTGCCC
131 GCGCAAGTCGGGGATCGATCGGATCCCCCTCTGCATGCTGTCAATCCTGCTACCC
* * * *
15904547 CAACCCTCGGTCTGGTCTGATCTTAGATTGGGAATGTACTCCGTATGC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
15904595 CTAAGCCAAC
Statistics
Matches: 207, Mismatches: 26, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
185 207 1.00
ACGTcount: A:0.21, C:0.29, G:0.28, T:0.22
Consensus pattern (185 bp):
CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGTCAAACCACGAAACGAGCATGCAGGCGCTCAGCCGACCAGAGGGGCCAGAT
GCGCAAGTCGGGGATCGATCGGATCCCCCTCTGCATGCTGTCAATCCTGCTACCC
Found at i:15905302 original size:26 final size:26
Alignment explanation
Indices: 15905266--15905316 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15905256 GATCTGATCT
* *
15905266 TAGACTGGGAATGAACTCTATATGCA
1 TAGAATGGGAATGAACTCCATATGCA
15905292 TAGAATGGGAATGAACTCCATATGC
1 TAGAATGGGAATGAACTCCATATGC
15905317 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.35, C:0.16, G:0.24, T:0.25
Consensus pattern (26 bp):
TAGAATGGGAATGAACTCCATATGCA
Found at i:15906196 original size:26 final size:26
Alignment explanation
Indices: 15906157--15906209 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15906147 CTGGTCTGAT
15906157 CTTAGACTAAGAATGAACTCCGTATG
1 CTTAGACTAAGAATGAACTCCGTATG
** * *
15906183 CTTAGACTGGGAATGATCTCTGTATG
1 CTTAGACTAAGAATGAACTCCGTATG
15906209 C
1 C
15906210 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAAGAATGAACTCCGTATG
Found at i:15907748 original size:884 final size:881
Alignment explanation
Indices: 15904354--15935534 Score: 28088
Period size: 889 Copynumber: 35.4 Consensus size: 881
15904344 CTGTCAATCC
* * * * * *
15904354 TGCTACCGTAACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTTGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
15904419 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGACCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
15904484 GGCGGGATGCGCAAGTCGGGGATCGGTCGGATCCCCCTCTGCATGCTGTCGATCTTGCTGCCCCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *
15904549 ACCCTCGGTCTGGTCTGATCTTAGATTGGGAATGTACTCCGTATGCCTAAGCCAACTGACGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* *
15904614 GAGCGGGCGGGCACTACTCCGGCCAGAGAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTA
261 GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*
15904679 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATTCCAATGCCATTTTTCTGGCTTGTAAATTCA
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
* *
15904744 TACAATTGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
391 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
** * * * * * ***
15904809 GATTTTTGAAACTTTTTACGGTTCGACATTTTTTAAACTTTTTTCAAAAAGTGTTCTGGGATCAA
456 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* * *
15904874 AATTGGTAGACGTGATCCTTGTATTTTTGTAGGCATGCACAAAAATATTCAGCTAAAAACTCGAA
521 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * *
15904939 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTATTCG
586 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* *
15905004 CAGCAAACCTGTAAAATCTCGAATGCTCTTTGAGGGGGTGTGAGTTC-CTGAGGTTTGATGAGGG
651 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGAGGG
* *
15905068 ATAGGGGGCCAATATAAGGGCCAAGAACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG
715 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG
* * * * * * *
15905133 CCCCCCCAATCGCCGGAACCCTAACGCCGCCGGTCAGGTTCTCCGGCAATGGTGTCCCGACGAAG
780 CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAG
* **
15905198 AAAAATACGGCACCAGCACATGCCTGAGCCCAGTTTG
845 AAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * * * ** * *
15905235 TGCTACCGTAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCTATATGCATAGAATGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * **
15905300 GAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGAATGCGGGCGCTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * ** * * * *
15905365 GGCGGGATGCGTAAGTCGAGGATCGACCGGGTCCCCCTCTGCTTCCTGTCGATCCTACTGCCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* ** * *
15905430 ACCCTCGGTCTTGTCCAATCTTAGACTGGGAATGAACTCCATATGCTTAAGCCAACTGACGTATC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC---CG-A-C
** * * * *
15905495 GAGCGGGCGGGTGGGCGGGCGGGCAGTACGCAGGCCAGAGAGGCGGGATGCGCAAGCCGTGGACC
256 GA-------AATGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* ** *
15905560 GATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTATCGTGCCAATGCCATTTTT-TGG
314 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
15905624 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
379 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** * * *
15905689 TCTATTTTTCAGGATTTTCAAAATTTTTTACGGTTCGGGATTATTTAAAATTTTTTCAGAAAGAG
444 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
15905754 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
509 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * * *
15905819 TAAAAATTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAATGTGTCCCAATTTCAGACACTTT
574 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
15905884 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGCTGTGAGTTCTCGAGG
639 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
15905948 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
704 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * *
15906013 ACACCCCCCCGGTCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCAACGG
769 ACA-CCCCCCGG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
* * * * *
15906078 TGTCCCGACGAAGAAAAATACGGCACCAGTACATGCCCGAGCCTAGCATC
832 TGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * **
15906128 TGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTAAGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
15906193 GAATGATCTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGACGCTCAGTCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * * *
15906258 GGCGGGATGCGCAAGCCCGAGATCGATCGGGTACCTCTCTGTGTGCTGTCGATCCTACTACCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* *
15906323 ACCCTCGATCCGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAT
196 ACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA-
* * * * * *
15906387 CGAGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGGTGGGATGCGTAAGCCATAGATCGAT
259 --A-----TGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * * * * *
15906452 AGGATGGTAGGTGGGTTGAGGTACATCTTCGTATTTTTGCCATCCCAATGCCATTTTTCTGGCTT
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
15906517 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
382 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* ** * * *
15906582 ATTTTTCATGATTTTTGAAACTTTTTACGATTCAAGATTCTTTAAAATTTTTCCAGAAGGATTTT
447 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * * *
15906647 TCGCCCCAAACATGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACCAAAAAATTCAGCTAA
512 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* ** *
15906712 AAGCTAAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTATT
577 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * * * *
15906777 GGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCGCTTTAAAGGGGTTTGAGTTCTAGAGGTTT
642 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * * ** *
15906842 GATGAGGGATAAGGGGCCAATATAAGGGCCAAG-GCAAAGCACCCATTACACATCATGTGTGCAC
707 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC-CAGCACCCATCGCACATCATGTGCGCAC
* * * * * *
15906906 AGACCCCCCGGTCCCCCCTGATCTTCGGAACCCTAATGCTGTCGGTCAGGTTCCCCGGCGATGGT
771 --ACCCCCCGG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
* * **
15906971 GTCCCGGCGAAGAAAAATGCGGCACCAGCATATGCCTGAGCATAGCATG
833 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * *
15907020 TGCTGCCTCAACCCTCGGTCTGGTCGGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
15907085 GAATGAACTCTGTATGACTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
15907150 GGCGGGATGCACAAGTCGGGGATCAGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCACA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * *
15907215 ACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAT
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* * * *
15907280 GAGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCGAGCCATGGATCGATAGGTTGGTA
261 GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*
15907345 AGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
* * *
15907410 TACAATGGTCCCTTAAGCCCTCATGTGAATTTTCATGGCAAGACGACTCGTTTTTTATTTTTCAT
391 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* * *
15907475 GATTTTTGAAACCTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGACTTTTGGCCCCA
456 GATTTTTGAAA-CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* * * *
15907540 AAATTTGTAGACGTGATCCTTCTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGA
520 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
*
15907605 AGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTG
585 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
15907669 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
650 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
15907734 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACGTCATGTGCGCACACCCCCCCG
715 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG
* ** ** *
15907799 GCCCCCCTCGATTGTCGGAACCCCAATGCCG-CAGGTCAGGTTCTGTGGTGATGGTGTCCTGACG
779 GCCCCCC-CGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATGGTGTCCCGACG
* *
15907863 AAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
842 AAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * *
15907903 TGCTACCGCAACCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACAGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
15907968 GAATGAACTCCGTATGCCTAAGCCAACCCACGAAACAAGCGTTCGGCCACTCAGCCGACCGGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * ** * * ** * * *
15908033 GGCAGGATGCGTAAGCCGGGGATCGACCGAGTCCCCATCTATGTTCTGCCAATCCTGCTGCCACA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * ** * * *
15908098 ACCCTCGATCCGGTCTGATCTTAGGCTGGGATTGAACTCTTTATGCCTAAGCCAATCGATGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
*
15908163 GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTA
261 GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * * *
15908228 GGTGGGTTTAGGCACATCATCATATTTCTGCCAAGCCAATGCGATTTTTCTAGCTTGTAAATTCA
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
*
15908293 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAT
391 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
*
15908358 GATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCA
456 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCA
* *
15908423 AACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC-AAAAAATTCAGCTAAAAAATCGA
520 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
*
15908487 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTG
585 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * *
15908552 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGGGTGAGTTCTCAAGGTTTGATGAGGG
650 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
15908617 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCTCGG
715 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG
** ** * * * * *
15908682 CCCTCTTCGATCACCGGAACCCTAATACCGTCGATCAGGTTCTCCGACGATGGTGTCTCGATGAA
780 CCC-CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAA
* * *
15908747 GAAAAATACGGCAACAGCACATGCCCGAGCCCAGCATG
844 GAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* *
15908785 TGCTGCCGCAACCCTCGGTCTGGTCCGAACTTAGACTGTGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15908850 GAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCGTTCAGTCGACCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
15908915 AGCGGGATGCCCAAGCCGGGGATTGGTCGGGTCCCCTTCTGCGTGCTACCGATCCTGCTACCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
** *
15908980 ACCCTCGGTC-GGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAC
196 ACCCTCGGTCTGG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
15909044 TGGGCAGGCGGGCAGTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
260 TGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * * *
15909109 AGGTTGGTTTAGGCACATCTTCATATTTTTGCCACGCCAATGCCATTTTTGTGGC--------T-
325 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
* *
15909165 -TACAATGGTCCCTTAATCCTTCATATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
390 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* **
15909229 CGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG-CCCA
455 TGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
*
15909293 AACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
520 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* *
15909358 AGTGTACAAGATTTTGTGACAATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGACTACTG
585 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * *
15909422 GCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGATGAGGG
650 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
15909487 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCAGCCCG
715 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCG
* * * * *
15909552 GCCCCCGCCGATCGTCGGAACCCCAATGCCGCCTGTCAGGTTCTTCGGCGATGTTGTCCCGGA-G
779 GCCCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCC-GACG
* * * *
15909616 AAGAAAACTACGGCACCAACACATGCCTGAGCCTAGCATG
842 AAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * * * *
15909656 TGCTGCAGCAACCCTCGGTCTGGTCCAATCTTAGATTAGGACTGAACTCCATATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
*
15909721 GAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
** * * * * * *
15909786 GGCGACATGCGCAAGCCGAGGATCGGTCAGGTCCCCCTCTGCGTGTTGCCAATCCTACTGCCACA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *
15909851 ACCCTTGGTCCGGTCTGATGTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA-
* * **
15909916 GAGCGAGCGGGCGTGCGGGCACTACGTCACCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
259 -A-TGAGC--G-G-GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
*
15909981 GGGTGGTAGGTGGGTTTAGGCACATCTTCATA--TCT--C-T-----T-CCATTTTTTTGGCTTG
318 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
* *
15910035 TAAATTCATACAATGGTCCCTTAAGCGTTCATGTGAAGTTTCATGGCAAGACTACTCGTTTTCTA
383 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * * *
15910100 TTTTTCAAGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTAAATTTTCTCAGAAAGAGTTTT
448 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* *
15910165 GGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAA
513 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* * * *
15910230 AACTCAAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTCCGCA-TTCTAGACACATTAAT
578 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAAT
* * * * * * *
15910294 GGCTACTGGCAACAGACTTGTAAATTCTCAAATGCTCTTTAAAGGGGTATGAGTTCTCAAGGTTT
642 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * *
15910359 GATGAGGGATAAGGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACATCATGTGTGCATA
707 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC--A
* * * *
15910424 GACCCCCTCGGCCCCCCCAATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCTGACGATGGTG
770 CACCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTG
* * *
15910489 TCGCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATA
834 TCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
** * * * * *
15910537 TGCTATCGTAACCCTTGTTTTGGACCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
15910602 GAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTCCGGGCGCTCAGCCGACCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * *
15910667 GGCGGGATGTGCAAGCCGGGGATTGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCACA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *
15910732 ACCCTCGATCCGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
*
15910797 GAGAGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
261 GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * ** *
15910862 GGTGGGTTTAGGCACATCTTAATATTTCTGCCGTGCCAATGTGATTTTTCTAGCTTGTAAATTCA
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
* *
15910927 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAG-CGACTCGTTTTCTATTTTTCAC
391 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
** * * * * *
15910991 GATTTTCAAAACTTTTTGCTGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGCTCCAA
456 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* * * * *
15911056 ACTTGGTAGACATGAACCTTGTATTTTTGTTGGCATGCACAAAAAATTTAAGCCAAAAACTCGAA
521 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
** *
15911121 GTCCACAAGATTTTGTGACCATTTG-AAAAAGTGTCTCCATTTCAGACACTTTAATGGCTACTGG
586 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* * *
15911185 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTTATGAGTTCTTGAGGTTTGATGAGGGA
651 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* * * *
15911250 TAGGGGGCCAAAATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCGCCTG-
716 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* * *
15911314 CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTAAGATTCTCCGACGATGGTGTCCCGACGCAGA
781 CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGA
**
15911379 AAAATATGGCACCAGCACATGCCTGAGCCCAGCATG
846 AAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * ** * * **
15911415 TGCTGCAGCAACCCTTGGTCCAGTCTGATCTTAGATTGGGAATGAACTTTGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
15911480 GAATGAACTCTGTATGCCTAAGTTAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCTAGAAG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * ** * * *
15911545 GGCGGGATGCGCAAGCCTGGGATTGATCGGATCCCCCTTTATGTGCTGTCGATCCTGCTGTCACA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * **
15911610 ACCCTTGATCCGATCTGATCTTAGACTGGGAAT-AA-AACG-A-G-C--AG------G-CG----
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* * *
15911657 G-GCGGGTGGGCACTACGCCGGCTAGAGAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTA
261 GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * *
15911721 GGTGGGTTTTGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCA
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
* * *
15911786 TACAATGGTCCCTTAAGCCTTCATATGAAGTTTCATGGCAAGATGATTCGTTTTCTATTTTTCAT
391 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* *
15911851 GATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAA-TTTTTCAGAAAGAGTTTTGGCCCCAA
456 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
15911915 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
521 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* *
15911980 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACCGG
586 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
*
15912045 CAGCAAACCTGTAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
651 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* * *
15912110 TAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTACGTACACCCCCCCGG
716 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-G
* * ** *
15912175 GCCCCCCCGATCGTCGAAATCCCAATGCCCCCGGTCAGGTTCTCCGACGATGGTGTCCTGACGAA
779 GCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAA
*
15912240 GAAAAATGCGGGCACCAGCACATG-CTCGAGACCAGCATG
844 GAAAAATGC-GGCACCAGCACATGCCT-GAGCCCAGCATG
*
15912279 TGCTGCTGCAA-CC-C--TC--G---G-TC-----C--GG--T---CT--G-AT-CTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15912318 GAATGAACTCCGTATGCCTAAGTGAACCCACGAAACGAGCGTGTGGGTGCTCAGCCGGCTAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
15912383 GGCGGGATGCGCAAGCCGGGGATTGATCGGTTCCCCCTCTGCATGCTGCCAATCCTGCTGCCGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *
15912448 ACCCTTGGTCCGAT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAA
196 ACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* ** *
15912512 CGAGCAGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTCTATCAAT
260 --TG-A-GC----GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * *
15912577 CGGGTGGTAGGTGGGTTTAGGCACATCTTCATATGTCTGCCATGCCAATACCATTTTTCTGGCTT
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* *
15912642 GTAAATTCATACAATGGTCCCTTAAGCCTTCTTGTGAAGTTTCATGGCAAGACGACTCGTTTTTT
382 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
** * * *
15912707 ATTTTTCACAATTTTTGAAACTTTTTACGGTTTC-AGATTTTTTAATATTTTTTCAGAAGGATTT
447 ATTTTTCATGATTTTTGAAACTTTTTACGG-TTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
*** *
15912771 TTGGTGACAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
511 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
15912836 AAAACTCGAAGTGTACAAGATTTGGTGACCATTTGAAAAGAGTGTCCCCATTTCAGACACTTTAA
576 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
15912901 TGGCTAC-GAGCAGCAAACCTGTAAAATCTCAAATGCTCCTTAAGGGGGTGTGAGTTCTCGAGGT
641 TGGCTACTG-GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * * * *
15912965 TTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTGCCAGCACCCGTTGCACATCGTGTGCGCA
705 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * * *
15913030 CACCCCCCGACCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTTAGGTTATCCGACGATGCTGT
770 CACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGT
* * * *
15913095 CCCGACGAAGAAAAATGCGGCACGAGTAAATGCCCGAGCCCAGCATG
835 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * * * *
15913142 TGCTGCTGCAACCCTCAGTCCGGTCTGGTCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
15913207 GAATGAACTCCGTATTCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAAG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* ** * ** *
15913272 GGTGGGATGCGCAAGCTAGGGATCGGTTGGGTCCCCCTCTGTATGCTACCGATCCTGCTGCCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* ** * * * * *
15913337 GCCCTCAATTTGGTCTGATCATAGACTGGGAATGAACTCCGTATGCCAAAGCCAACCGATGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* * * *
15913402 GAACGGGCGGTCAGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGAAAGCCGTGGATTGATA
261 G-A---GC-G---GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
*
15913467 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATTCCATTTTTCTGGCTTG
318 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
* *
15913532 TAAATTCATAAAATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
383 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * ** ** * *
15913597 TTTTTCACGATCTTCAAAACTTTTTACAATTTGGGATTTTTTAAACTTTTTTCAGAAGGAGTTTT
448 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * * *
15913662 GGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCATAAAAGAATTCAACTAAA
513 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
15913727 AACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
578 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
15913792 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
643 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * * * * * *
15913857 ATGATGGATAGGGGGCCAATATAAGGGACAAGTGCCAGCACCCATCACATATCATTTGCGTACAC
708 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
** ** * *
15913922 CCCCCGGGTCCCCCGATCGTCGGAACCCCAATGCCCCCGGTCAGGTTCTCCGACGATGCTGTCCT
773 CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCC
** * *
15913987 GGTGAAGAAAAATACGGCACCAGCACATG-CTCGAGACCAGCATG
838 GACGAAGAAAAATGCGGCACCAGCACATGCCT-GAGCCCAGCATG
** * * * *
15914031 TGCTATCGCAACCCTTGGTCCGGTCCGATCTTAGACAGGGAATGAACTCCGTATGGTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
15914096 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCGTTCCGCCAGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * ** * *
15914161 GGCGGGTTGCGCAAGCCGGGGATCGGTCGAGTCCCCCTTTGCGTACTATCGATCCTGCTGCTGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
** *
15914226 ACCCTCAATCTGGT-TCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA
196 ACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
15914290 TGAACGGGCGGGCGGGCAGGCACTACGTCGACCAGAGAGGCGAGATCCGCAAGTCGTGGATCGAT
260 TG-A---GCGGGC--G--GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
*
15914355 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCTT
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
*
15914420 GTAAATTCATACAATGATCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
382 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* ** * * *
15914485 ATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTTAAAA-TATTTCTAGAAGGAATT
447 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-AGAAGGAGTT
* * *
15914549 TTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACGAAAATATTCAGCTA
511 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* ** * *
15914614 AAAACTTGAAGCATACAAGATTTTGAGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAA
576 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
15914679 TGGCTTCTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTT
641 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
15914744 TGGTGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACTTCATGTGCGCGC
706 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * **
15914809 ACCCCCTCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTCCGGGGATGGTG
771 A-CCCC-CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTG
* * *
15914874 T-CCTAGCGAAGAAAAATGTGGCACCAGCACATG-CTCGAGCCCAGCATA
834 TCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCT-GAGCCCAGCATG
* ** * *
15914922 TGCTGCCGTAACCCTCATTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTGGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15914987 GAATGAACTCCGTATGCCTAAGTGAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCAAGAAG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
*
15915052 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTTCCCCTCTGCGTGCTGCC-A-----------CA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* *** *
15915105 ACCCTCAGTCCAATCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAACCGACGAAAT
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* * * *
15915170 GAGCGGGCGGGCGGACGGGCACGACGTCGGCCAGAGAGGCGGGTTGTGCAAGCCATGGATCGATA
261 GAGCGGGCGGGC--AC---TACG-C--CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* *
15915235 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGTCAATGCCATTTTTCTGGCTTG
318 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
15915300 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
383 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
15915365 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTCAGAAGGAGTTTT
448 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * *
15915429 GGCTCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCGCAAAAACATTCAGCTAAA
513 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
15915494 AACTCAAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATA
578 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
15915558 GCTACGGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTG
643 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * *
15915623 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGTACATCATGTGTGCACAC
708 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
* * * **
15915688 CCCCCCGGCCCCCCCGATCATCGGAACCCCAATGTCGTCGGTCCGGTTCTCCGGTGATGGTGTCC
772 CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCC
* * *
15915753 CGACGAAGAAAAATGCAGCACTAGCACATGCCCGAGCCCAGCATG
837 CGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * ** * * *
15915798 TGCTGCCACAACCTTTGGTCCAGTTCGATCTTAGATTGGGAATGAACTCTGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* ** * *
15915863 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTTAGTGCGCTCAGCCAGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * *
15915928 GGCGGGATGCGCAAGTCGAGGATCGATCGAGTCCCCCTCTACGTGTTGCCGATCCTGCTACTGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
** * * * *
15915993 ACCCTCACTCTGGTCTGATCTTAGACTGGTAATAAACTCCGTATGCCTAAGCCAATCGACAAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-
* * ** * *
15916058 GGTTGGGCAGGCGGGCACTACGCCGGTTAGAGAGGTGGGATGCGCAAGCCATGGATCGATAGGGT
260 ---TGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
* * *** * *
15916123 GGTAGGTCGGTTTAGGCACATATTCATATTTCTGTGGTGCCAATCCCATTTTTCTAGCTTGTAAA
322 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAA
* *
15916188 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTT
387 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * *
15916253 TCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAATTTTTTTCAGAAGGAGTTCT-CCC
452 TCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCC
* **
15916317 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGACATGCACAAAAGCATTCAGCTAAAAACT
517 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * *
15916382 CGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAAACACCTTAATGGCTA
582 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * *
15916447 CTGGCAGGAAACCTATAAAATCTCAAATACTCTCTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
647 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCT-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * * *
15916512 AGGGATAGGGAGCCAATATAAGAGCCAAGTACCAGCACCGATTGCACATCATGTGCGCACA----
711 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* *
15916573 -----CCCCCCGATTGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGAC
776 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGAC
* *
15916633 GAAGCAAAATACGGCACCAGCACATG-CTCGAGCCCAGCATG
841 GAAGAAAAATGCGGCACCAGCACATGCCT-GAGCCCAGCATG
** * *
15916674 TGCTGTAGCAACCATCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
15916739 GAATTAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* ** * * * * *
15916804 GGCAGGATGCGCAAGCCGAAGATCGCTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGTCGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *** *
15916869 ACCCTCGGTCTGCTCTGATCTTAGATTGGGAATAAACTTTATATGCCTAAGCCAACTGACGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-
* * * * * *
15916934 GGGCGGGCGGGCGGGCACTACGTCGGCCAGATAGGCGGGATTCGCAAGCCGTGGATCGATGGGGT
260 ---TGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
* *
15916999 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC-CGACCAATGCCATTTTTCAGGCTTGTAA
322 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG-CCAATGCCATTTTTCTGGCTTGTAA
* * * **
15917063 ATTCCTACAATGGTCCCTTAAGCCTTCTTGTGAAGTTTCATGGCAAGATGTTTCGTTTTCTATTT
386 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * *
15917128 TTCATGATTTTTGAAACTTTTTATGATTC--GATATTTTTAAAATTTTTTCAGAAGGAGTTCTCG
451 TTCATGATTTTTGAAACTTTTTACGGTTCGGGAT-TTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* *
15917191 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TCTGGCATACACAAAACAATTCAGCTAAAA
515 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACAAAAAAATTCAGCTAAAA
* *
15917255 ACTCGAAGTGTACAAGATTTTGTGACTATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGG
579 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* *
15917320 CTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGA
644 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * * *
15917385 TGAGGGATAGGGGGCCAATATTAGGGCCAAGTTCCAGCACCCATCGTACATCATGTGCGTACACC
709 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * * * *
15917450 CCCCGGCCCCCTCGATCGTCGGAACCTCAATGCCGCCGGTCAGGTTCTCCGGCGATGATGTCTCG
774 CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCG
* *
15917515 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGACCAGCATG
839 ACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* **
15917558 TGCTGTCGCAACCCTCGGTGC-GGTCCGATCACAGACTGGGAATGAACTCCGTATGCTTAGACTG
1 TGCTGCCGCAACCCTCGGT-CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * *
15917622 GGAATGAACTCCGTATGCCTAAGTCAACCCACGTAACGAGTGTGTGGGCGCTCAGTCGGCCAGAG
65 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* ** * ** *
15917687 GGGTGGGATGCGCAAGTTGGGGATCGATCGGGTCCCCCTCTATGTGCTGTCGATCCTGCTGCCGC
130 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * * *
15917752 CACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAAT
195 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
15917817 TGAGCGGGTGGGCGGGCACTACGCCTGCCAGAGAGGCGGGATGCGCAAGCCGTGGATTGGTAGGT
260 TGAGC----GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* *
15917882 TGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTAGCTTGTAA
321 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
* *
15917947 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTCCATTT
386 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
** * * ** * *
15918012 TTCATGATTTTCAAAACTTTCTACTGTTCCAGATTTTTTAAAATTTTTTCAGAAGGAGTCTTGGT
451 TTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
* *
15918077 CCCAAACTTGGTAGACAG-GATCCTTGTATTTTTATTGGCATTCACAAAAAAATTCAGCTAAAAA
516 CCCAAACTTGGTAGAC-GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
15918141 CTCGAAGTGTTCAAGATTTTGTGACCATTTGAAAAAATTGTCCCAATTTCAGACACTTTAATGGC
580 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
*
15918206 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAT
645 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
15918271 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CC
710 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
** * * * * ** *
15918335 CCCTACCCCCCCGATCGTCGAAACCCTACTACCGTCGGTCAGGTTCTCCGGTGATGGTGTCCCGG
775 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGA
* * *
15918400 CTAAGAAAAATGCGGTACCAACACATGCCTGAGCCCAGCATG
840 CGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * *
15918442 TGCTGCAGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTGCATATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15918507 GAATGAACTCCATATGCCTAAGTCAACCCACGGAACGAGCGTGCAGGCGCTCAGCCAGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * ** * * * * * *
15918572 GGTGAGATAAGCAAGCCGAGGATCGGCCAGGTCCCCCTCTGCATGCTGCCAATCCTGCTGCTGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *
15918637 ACCCTCGATCTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAAAT
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* *
15918702 GAACGGGCGGGTGGGTAGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
261 G-A---GC-GG-GCG--GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* * * *
15918767 GGGAGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACTATGCCAATGCCATTTTTCTGGCTAG
318 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
** *
15918832 TAAATTCATACAATAATCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
383 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
*
15918897 TTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
448 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * * * * *
15918962 GTCTCCAAATTTGGTAGACGTGATGCTTTGTATTTTTTTTGGCATGTAC-AAAAAATTCAGCTAA
513 GGCCCCAAACTTGGTAGACGTGAT-CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
15919026 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
577 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
**
15919091 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAAGGGTGTGAGTTCTCGAGGTTT
642 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
15919156 GATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACA
707 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* *** * * *
15919221 CCCCCCTCGATCCCCCCCGATCGTCGGAACCCCAATTTTGTCAGTAAGATTCTCCGACGATGGTG
772 -CCCCC-CG-GCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTG
*
15919286 TCCC-AGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
834 TCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * ** *
15919334 TGCTGCAGCAACCCTCGGTCCGGTCCGATCTCATTCTGGGAATGTACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
15919399 GAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGTGTGCGGGCTCTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* *
15919464 GGCGAGATGCGCAAGCCGAGGATCGGTCGGGT--CCC-C--C-T-CT---G---CTGCT---GCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* ** * * *
15919513 ACCCTCGGTCTGATCCAATCTTAGATTGGCAATGAACTACGTATGCCTAAGCCAACCGACGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-
* ** *
15919578 T-AGCGGGCGGACGGGCGTGCAATACGGGGGCCAGAGAGGCGGGATGCGCAAGCCGTGAATCGAT
260 TGAGC--G-GG-C--G-G-GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * * ** *
15919642 AGGGAGGTAGGTGTGTTTAGGCACATCTTCATATTTCTACTGTGCCAATGCCATTTTTCTAGCTT
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* * *
15919707 GTAAATTCATACAATGGTCCGTTAAGCATTCATGTGAAGTTTGATGGCAAGACGACTCGTTTTCT
382 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * *
15919772 ATTTTTCACGATTTTTGAAACTTTTTGA-GGTTCGGGAATTTTTAAAATTTTTTCAAAAGGCA-T
447 ATTTTTCATGATTTTTGAAACTTTTT-ACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGG-AGT
* ** * * *
15919835 TTTGGCCCCAAATTTGGTAGTTGTCATCCTTGTATTTTTTTTGGCATGCAAAAAAAAATTCAGCT
510 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
15919900 AAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTCCCC-TTTCAGACACTTTA
575 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * *
15919964 ATGGCTACTGGCAGCAAACCTGGAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCAAGGT
640 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
*
15920029 TTGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCGCACATCATGTGCGCA
705 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * * *
15920094 CAGACCCCCCGGCCCCCCCGATCGCCGAAACCCTAATGTCGTCAGTCAGGTTCTTCGACGATGGT
770 C--ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
* * *
15920159 GTCCCGACGAAGAAAAATACGGCACCAGCACATGCTTGAGCTCAGCATG
833 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
*
15920208 TACTGCCGCAA----C---CT--TCC-ATC-----C---G---G---TCCG-AT-CTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
15920247 GAATGAACTCCATATGCCTAAGTCAACACAAGAAACGAGAGTGCGGGCGCTCAGCCGACCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * *
15920312 GGCAGGATGCGCAAGTCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* *
15920377 ACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* * * * * * *
15920442 AAGCGGGCGGGCACTACGCCGGCCAAAAAGGCAGGATGCGCAAACTGTGGATGGATAGGGTGGTA
261 GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * * *
15920507 GGTGGGTTTAGGCACATCTTCATATTTTTGCCGTGCCAATGCCATTTTTTTGGCTTGTAAATTAA
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
* * *
15920572 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCGTGGTAAGACCACTCGTTTTCTATTTTTCAT
391 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* *
15920637 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTT---TAGGAGTTTTGGCCCCAA
456 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* *
15920699 ACTTGGTAGACGTGATCCTTCTATTTTTGTTGGCATGCACACAAAAATTCAGCTAAAAACTCGAA
521 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * *
15920764 GTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTTAGACACTTTAATGGCTATTGG
586 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* *
15920829 CAGCAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGA
651 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
*
15920894 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACTCCCCCCGGC
716 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* * * *
15920959 CCCCTCCGCTCGTCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGATGAAG
781 CCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAG
*
15921024 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
845 AAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* *** * * *
15921061 TGCTGCCGTAACCCTCGGTCCATTTCGAGCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * *
15921126 GAATTAACTCTGTATCCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCAGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * * *
15921191 GGTGGGATGCACTAGCCTGGAATCGGGT-GGGTCCCCCTCTACATGCTGCC-ATCTTGCTGTCGC
131 GGCGGGATGCGCAAGCCGGGGATC-GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
15921254 AACCCTCGGTCTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC-AATGCCAACCG
195 AACCCTCGGTCTGGT-C--T--GATCTTAGACTGGGAATGAACTCCGTATGCCTAA-GCCAACCG
* * * * * *
15921318 ATGAAACGAGTGGACAGGCACTACGCCGGCCATAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
254 ACGAAATGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* *
15921383 GGTGGTAGGTGGGTTTAGGCACATCTTAATATTTCTGCCCTGCCAATGCCATTTTTCTGGCTTGT
319 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
* *
15921448 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAGACGACTCATTTTCTAT
384 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
** ** *
15921513 TTTTCATGATTTTCAAAACTTTTTGTGGTTCGGGGTTTTTTAAAATTTTTTCAGAAGGAGTTTTG
449 TTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* * * * *
15921578 GTCCCAAACTTGGTAGACGTGATCCCTGTATTTTTATTGGCATGCATAAAAAAATTGAGCTAAAA
514 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
15921643 ACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGG
579 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * *
15921707 CTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAATTCTCGA-GTTTGA
644 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* ** *
15921771 TGAGGGATAGTGGGCCAATATAAGGGCCAAGTACCAGTGCCCATCGCACATCACGTGCGCACACC
709 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * *
15921836 CCCTGG-CCCCCCGATCGTCGGAACCCCAATACCGTCGGTAAGATTCTCCGACGATGGTGTCCCG
774 CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCG
* * * * * * *
15921900 GCGAGGAAAAATACGGCACCAGCACTTACCTAAGCACAGCATG
839 ACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * *
15921943 TGCTGCAGCAACCCTCAGT-TCGG-CTCGATCTTGGACTGGGAATGAACTCCGTATGCTTAGACT
1 TGCTGCCGCAACCCTCGGTCT-GGTC-CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* ** * * *
15922006 GGGAATGAACTCCGTATGCCTAAGTCTACCCACGAAACGAATGTGCGGGCACTCAGCCGACCAAA
64 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * * * *
15922071 GGGGTGAGATGCACAAGCCAGGGATCGGTCGGGTCCCCCTCTCCGTGCTGCCGATTCTGCTACTG
129 GGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
* * *
15922136 CAACCTTCGGTTTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
194 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
15922201 ACGAGCAGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGTGGGATGTGCAAGCCATGGATCGA
259 A--TG-A----G-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* ** * *
15922266 TAGGGAGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATGTCATTTTTTTGGCT
316 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
* *
15922331 AT-TAAATTCATATAATGGTCCCTTGAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
381 -TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* ** * * * *
15922395 CTATTTTTTACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTCAAACTTTTTTCAGAATGAGT
445 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGT
* * *
15922460 TTTGGCCCCAAACTTGGTAGATGTGATCTTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT
510 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
15922525 AAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
575 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* *
15922590 ATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTC-CTGAGG
640 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGG
* * * * *
15922654 CTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCACACATCACGTGCGT
704 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * * *
15922719 ACACCTCCCCCGACCCTCCCGATCGTCGAAACCCCAATGCAG-CTGGTTAGGTTCTTCGATGATG
769 ACA-C-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATG
** *
15922783 GTGTCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATG
831 GTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * *
15922834 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGGATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15922899 GAATGAACTCCG-ATGCCCAAGTCAACCCACGAAACGAACGTACGGGCGCTCAACCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* ** * * * * *
15922963 GGCGGGATGCGCAAGCCGGGGATTGACCGGGTCTCCCTCTTCGTGCTGTCGATCCTACTACCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * *
15923028 ACCCTCGGTCTGGTCCT-ATCTGAGACTGGGAATCAACTCCGTATGCCTAAGCCAACCGAGGAAA
196 ACCCTCGGTCTGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
15923092 TGAACGGGTGGGCACTACGCCGACCAGAGAGGCGGGATACGCAAGCCGTGGATCGATAGGGTGGT
260 TGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
15923157 AGGTGGGTTTAGGCACATCTTCATATTCCTGCCATGCCAATGCCATTTGTCTAGCTTGTAAATTC
325 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
* *
15923222 ATACAATGGTCCCTTGAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTACTATTTTTCA
390 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * *
15923287 TGATTTTTGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTCTCAGAAGAATTTTTGGCCCCA
455 TGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* * *
15923352 AACATGGTGGACGTAATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
520 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* * * *
15923417 AGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTTAGACACTTTAACGGCTACTT
585 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* *
15923482 GTAGCAAACCTGTAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
650 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
15923547 ATAGGGGGCCAATATAAGGGACAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGG
715 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG
* * ** * *
15923612 CCCCCCCCGATCGTTGGTACCCCAATGCCACCGGTCAGGTTCTCTGGCGATGGTGTCCCGACGAA
780 -CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAA
*
15923677 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
844 GAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * * * * **
15923715 TGCTGTCGCAACCATCGATCCGGTCTGATCTTAGAATGGGCGTGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * ***
15923780 GAATGAACTCTGTATGCCTAAGTCAACCAATGAAAAGAGTGTGCGATTGCTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* *** * * * * * *
15923845 GGTGGGATGCGCAAGCCGGGGATCAACCAGGTCCCCTTTTTCGTGCTGTCGATCCTGCTGCCGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * * *
15923910 ACCCTCAGTCCGGTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAATCGACAAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-
* * * *
15923975 GGGAGAGTGGGCGGGCAGGCCTTACGCCGGCCAGAGTGACGGGATGCGCAAGCCGTGGATCGATA
260 ---TGAGCGGGCGGGCA---C-TACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* * *
15924040 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTCCTACCATGCCAATGCCATTTTTTTGGCTTG
318 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
*
15924105 TAAATTCATACAATGGTCCCTTAAGCCTTGATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
383 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * *
15924170 TTTTTCATGATTTTTGAAACTTTTTGCAGTTCGGGATTTTTTAAAATTTTTTCAGAAAGATTTTT
448 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * * * *
15924235 AGCCCCAAACATT-TTGGATGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAA
513 GGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* *
15924299 AAACTCGAAGTGTACAAGATTTTTGTGACCATTTGAAAAAAATGTCCCCACTTCAGACACTTTAA
577 AAACTCGAAGTGTACAAGA-TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
15924364 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGAGAGTTCCCGAGGTT
641 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
15924429 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
706 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * * * * * * * * *
15924494 ACCCCCCGG-TCCCTCAATCGCCAGAACACCAATGTCGCCGTTTAGGTCCTCCGACAATGGTGTC
771 ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTC
** * * * * *
15924558 CCGGTGAAGAAAAATGCAGCACTAGCACATGCCCGAGCCCAGCCTA
836 CCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
**
15924604 TGCTGGTGCAA--C-C---C---T-CGA---T---C--GG---G---TCCG-ATG-TTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15924643 GAATTAACTCCGTTTGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCAGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * ** *
15924708 GGCGGGATGCGCAAGCCGGGGATCGGTCAGGTCCCCTTCTGCGTGTTGCCCATCCTACTATCGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
*
15924773 ACCCTCAGT-TCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
196 ACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
15924837 TGGGCGGGTGGGTGGGCGGGCACTACGTCGGCCAGAGAGGTGGGATGCGCAAGCCGTGGATCGAT
260 TGAGC--------GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * *
15924902 AGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCGATTTTTTTGGCTT
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* *
15924967 ATAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGGCGACTCGTTTTCT
382 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * *
15925032 ATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGTGTTT
447 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * ** *****
15925097 TGGCCCTAAACTTGGCAGACGTGATCCTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACAC
512 TGGCCCCAAACTTGGTAGACGTGATCCTTGT-A-TTTTTGTTGGCA-TG----CA---CAAA-A-
* * * * ** ****
15925162 TTTAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCTCG
565 ---AA-----A-T-TCAG-----C--TAAAAACTCGAA-G-TGTACAAGATTTTGTGA---C-C-
* * * ** * * **** * *
15925227 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
606 A--TTTGA--A--AAAAGTGTCCCCAT-T-----TC-AG-A-CA-CTTTAATGGC-TA-C-TG-G
** ******* * ** ** ***** *
15925292 C-GCTCACCCCCCCGGTCCCCCCCAT-CGTC-GGAACCCTAATGT-CG-TCGGTC-AGGTTCTCC
651 CAGCAAACCTGTAAAAT--CTCAAATGC-TCTTTAA-GGGGGTGTGAGTTC--TCGAGGTT-T--
*** * * * * ** * * *** *
15925351 GATGATGGTG-T-CCCGACGAAGAAAAATG-C-GGCACCAGCACATGCCCGAGCCCAGT-ATGTG
707 GATGA-GG-GATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC---CCATCGCACA-TCATGTG
** * * **** * ** * * **
15925411 CTGTCGTAACCCTCGGTCTGGTCCGATCTTAGACGGGGAATGAACTCCGTATGCTTAGACTGGGA
766 C-G-CACACCCCCCGG-CCCCCCCGATC---GTC---G---GAAC-CCCAATGC--CGTC-GGTC
* ** * * * ** * ** * *
15925476 ATGAACTCCGTATGCCTAAGTCAACCCG-TGAA-ACGAGCATGCGGGTGCTCAACCGGCCAGATG
815 AGGTTCTCCG-ACG-AT-GGT-GTCCCGACGAAGA--AAAATGC--G-G--C-ACCAG-CACAT-
** *
15925539 GGCAGGATGCTCATGTCA-G
866 -GCCTGA-GCCCA-G-CATG
* * * * * ** **
15925558 GGTTCGATCG-AGTCCCCCTCTGCGTGCT-G-CCGATCCT-G-CTGTCACAACCCTCGGTCCGGT
1 TGCT-G-CCGCA---ACCCTC-G-GT-CTGGTCCGATCTTAGACTG--GGAA---T--GAAC--T
* * *
15925618 CC-TAT-CTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAAC--G-G-GCGGGC
49 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * ** * * ****** * *
15925677 ACT-ACGTCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGT-GGTAAGTGGGT-TT
114 GCTCA-GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT
* * *** ** *
15925739 AGGCAC-ATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG-CTTGTAAATTCATAC----
178 --GC-CGATC--C----TGCTGCC--G-CAA--CCCTCGGTCTGGTC-TG-ATCTT-AGACTGGG
** * * ** * * * * ** **** *****
15925798 AATGGTC-CCTTAAGCCTTCGTGTCAAGTTTC-ATGGCAA-GA-CGGTTTGTTTTCTA--TTTTT
226 AATGAACTCCGTATGCC-T-AAGCCAA---CCGA-CGAAATGAGCGG-GCGGGCACTACGCCGGC
***** ** **** * * *** *** ** ** ** *
15925857 CATGATTTTTGAAACTTTTTATGGTTCG-GGATTTTTTTAAATTTTTTCAGAAAGATTTTTGGCC
284 CA-GAGAGGCGGGA-TGCGCA-AG-CCGTGGA--TCGAT-AGGGTGGT-AG-GTGGGTTTAGG-C
* ** ** * * * *
15925921 CCAATCTTGGT-TGACATG--AT-CC-TTG-TACTTTTGT-TGGCATGCATAA---A-ACAAT--
339 AC-ATCTTCATATTTC-TGCCATGCCAATGCCA-TTTT-TCTGGCTTGTA-AATTCATACAATGG
* * ** * * * * * **** ** * ***
15925973 TCAGCTAAAAACTTGAAGTGTACAAAATTT--T-G--TGACCA-T--TTGAAAAAAATGTCCCCA
399 TC-CCTTAAGCCTT-CA-TGT--GAAGTTTCATGGCAAGACGACTCGTT-TTCTATTTTTCATGA
** * * * * *** * ** ** *
15926030 TTTCAGACAC-TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG-GGT
458 TTTTTGAAACTTTTTACGG-TTC-GG--G--ATTTTTTAAAAT-T----TTTTC-AGAAGGAGTT
* * * * ** * * **** * * ** * * * ***
15926093 GTGAGTTCTCGAGGTTTG-ATGA-GGGATAGGGGGCCAATATAAG--GGCCAAGTACCAGCACCC
511 TTG-G-CCCCAAACTTGGTA-GACGTGAT-CCTTG--TATTTTTGTTGG-CATGCA-CA-AAAAA
** ** *** * ***** * * *
15926154 ATTGCA-C-ATCATGTGCGCACA-TCCCCCCAG--TTCCCCCCCGTTGCCGGAAACCCAA-TG-C
567 ATT-CAGCTAAAAACT-CG-A-AGT-GTACAAGATTTTGTGACCATT---TGAAA--AAAGTGTC
** * ** * * * * * * *
15926212 CACC-GGTCAGGTTATC-CGTCGATGGTGTCCCGACGAAGAAAAATGCTGCACCAGCACATGCTC
622 C-CCATTTCA-G--A-CACTTTAATGG-CTACTG--GCAG-CAAA-CCTGTA--A--A-AT-CTC
* **** * * * *** ** * **** * *
15926275 -GA-GC-CCAGCATGTGCTGTCGCAACCCTC--GGTCCGGTGCAATCTTAGACTGGG--AAT-GA
671 AAATGCTCTTTAAGGGGGTGT-G-AGTTCTCGAGGTTTGATG-AGGGATAG--GGGGCCAATATA
** * *** * * * *
15926332 A-CTCC--GTATGCTTAG-ATTGGGAAT-GAAC-TC-TGTATAC-CTAAGTCAACCCACGG----
731 AGGGCCAAGTA--C-CAGCA---CCCATCGCACATCATG--TGCGC--A--CACCCCCCGGCCCC
*** * * * ** * * * * * * *
15926385 AATGAGCGTTCGG-GCGCTCAGGCA-GCCAGAGGGGCAGG--ATGCG-CAAGTCGGGGAT-CAGT
784 CCCGATCG-TCGGAAC-CCCA---ATGCC-GTCGGTCAGGTTCTCCGACGA-T-GGTG-TCCCGA
* * * *** *
15926444 CG--G----GT-C--C-CC--CTC-TGCGTGCTTCC-G-ATCC
840 CGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCAT-G
* * * * * *
15926472 TACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGC-----C---
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
** ** *
15926529 ---T--A------A-G-----G-CAACTGACGAAAC--G-G-GCGGGTACT-ATGCCAGCCAGAG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA-GCCGGCCAGAG
* * * * ****** * *
15926571 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGT-GGTAGGTGGGT-TTAGGCAC-ATCTTCATAT
130 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT--GC-CGATC--C----
* * *** ** * ** * *
15926633 TTCTGCCATGCCAATACCATTTTTCTGG-CTTGTAAATTCATAC----AATGGTC-CCTTAAGCC
186 TGCTGCC--G-C-A-ACCCTCGGTCTGGTC-TG-ATCTT-AGACTGGGAATGAACTCCGTATGCC
* * * * ** * * * * ** **** * ***** ** **
15926692 T---TC-A-TG-TGAAGT-TTCATGGCAAGACAGTTTGTTTTCTA-TTTTTCATGATTTTTG-AA
243 TAAGCCAACCGACGAAATGAGC-GGGC-GGGCACTACGCCGGCCAGAGAGGCGGGA--TGCGCAA
* ** ** * * * ** ** ** ** * * *
15926748 ACTTTTTATGGTTCGGGATTTTTTTAAAT-TTTTTCAGAAAGAGTTTTGGCCCCA-ATCTCGGTT
304 GCCGTGGATCGATAGGG----TGGTAGGTGGGTTT-AGGCACA-TCTT-----CATATTTC---T
* * * * * * * * **
15926811 GACGTGATCC-TTG-TACTTTTGT-TGGCATGCACAA---A-ACAAT--TCAGCTAAAAAC-TCA
355 GCCATG--CCAATGCCA-TTTT-TCTGGCTTGTA-AATTCATACAATGGTC-CCTTAAGCCTTC-
* * * **** ** * *** ** * *
15926866 AAGTGTACAAGATTT--T-G--TGACCA-T--TTGAAAAAAATGTCCCCATTTCAGACAC-TTTA
413 -A-TGT-GAAG-TTTCATGGCAAGACGACTCGTT-TTCTATTTTTCATGATTTTTGAAACTTTTT
* * *** * * * ****** * *
15926922 ATGGCTACTGGCAGCAAACCTGTAAAA---TTTCA-AATG-CTCTTTAAGGGGTGTGAGTT-CTA
473 ACGG-TTC-GG--G--ATTTTTTAAAATTTTTTCAGAAGGAGT-TTT--GGCCCCAAACTTGGTA
**** * ** **** ** * * **
15926981 GA-G-G-T--TTG-ATGAGGGATAGG-GGGC-CAATATAAGGGCCAAG-TACCAGCACCCA-T-T
529 GACGTGATCCTTGTATTTTTG-TTGGCATGCACAA-A-AAAATTC-AGCTAAAAACTCGAAGTGT
* * ** ** ****** * * * *** ** *
15927035 GC-ACATCATGTG-CGCACAT-CCCCCCGT-TCCCCCCCGTTGCCGGA-ACCCCAAT-GCCGCCG
590 ACAAGATTTTGTGAC-CATTTGAAAAAAGTGT---CCCCATT-TCAGACACTTTAATGGCTACTG
** * **** * *** ****
15927094 GTCAGGTTATCCGTCGATGGTGTCCCGACGAAGAAAAATGCTGC-ACCAGCACATGCTCGAG--C
650 G-CA-GCAAACC-T-G-TAAAAT--C-TC------AAATGCT-CTTTAAGGGGGTG-T-GAGTTC
* * * * * ** * * * * *
15927156 -CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTG-CAATCTTAGACTGGG--AATGAACTCCGTA
698 TCGAG-GTTTGATG-AGGGA---TAGG---GG-GCCAAT-ATA-A--GGGCCAA-GTAC-CAGCA
** * * * * * * * *** *** * * * * *
15927217 TGCTTAG-ATTATGAATGAACTCCGTATACCTAAGCTAACCCACGGAATGAGCGTTCGG-GCGCT
748 CCCATCGCA-CAT-CATG---TGCGCACACC-CCCCGGCCCCCCCG-AT---CG-TCGGAACCCC
* * * ** * * ** * ** **** ** ** *
15927280 TA-GCCAGCCAG--AGG---GGC-AGGAT-GCG-CAAGTCGGGGATCGGT-CGGGTCCCCCTC-T
802 AATGCC-GTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
* *** *
15927334 GCGTGCTTCC-G-ATCC
866 GCCTGAGCCCAGCAT-G
* * * * *
15927349 TACTACCGCAACCCTCAGTCCGATCCGATC-T----T----A-G-A---C---TG----GA----
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * ** *
15927389 -AATGAACTCCGTATGCCTAAGGCAACCGATGAAAC--G-G-GCGGGTACT-ATGCCAGCCAGAG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA-GCCGGCCAGAG
* * * * ****** * *
15927448 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGT-GGTAGGTGGGT-TTAGGCAC-ATCTTCATAT
130 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT--GC-CGATC--C----
* ** *** * ** * ** * *
15927510 TTCTGCCATGCCAATGCAATTTTTCTAG-CTTGTAAATTCATAC----AATGGTC-CCTTAAGCC
186 TGCTGCC--G-CAA--CCCTCGGTCTGGTC-TG-ATCTT-AGACTGGGAATGAACTCCGTATGCC
* ** * * * ** * ** ****** ** ***
15927569 TTCATGTGAA-GGTTCATGGCAAGATGA-C--TCGTTCTCTATTTTTCACGATTTTTGAAACTTT
243 -T-AAGCCAACCG---A-CG-AA-ATGAGCGGGCGGGCACTA---CGC-CGGCCAGAGAGGCGGG
* * * * *** *** ** ** * * * ** **
15927630 TTACG---GTTC-AGGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGCCCAAAACTTGGTA-GA
296 ATGCGCAAG-CCGTGGA--TCGAT-AGGGTGGT-AGGTGG-GTTTAGG--CACATCTTCATATTT
* * * * * * * * * **
15927690 CATG--AT-CC-TTG-TATTTTTTTTTGCATGCACAA---A-A-AAT-TTCAGCTAAAAAC-TCG
353 C-TGCCATGCCAATGCCA-TTTTTCTGGCTTGTA-AATTCATACAATGGTC-CCTTAAGCCTTC-
* ** * ** *** * * *** *
15927743 AAGTGTACAAGATTTTGTGGCCATTTGAAAAAAAGTGTTCCCA--TTTCA-GACACTTG-AA-TG
413 -A-TGT-GAAG-TTTCATGG-CA--AGACGACTCGT-TTTCTATTTTTCATGATTTTTGAAACTT
** ** *** * ** ** * * * * ***
15927803 GCTACTGG--CAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTT
470 TTTAC-GGTTC-GGGATTTTTTAAAAT-T----TTTTC-AGAAGGAGTTTTG-G--CCCCAAACT
* **** * * ** ** ** * * * *
15927866 TGGT-GA-GGGATAGGGGGCCAATATAAG--GGC---CA-AGTACCA-GCACCTATCACACATC-
524 TGGTAGACGTGAT-CCTTG--TATTTTTGTTGGCATGCACAAAAAAATTCAGCTA-AAAAC-TCG
* ** ******* ***** ** * * * ** **
15927921 ATGTGCGCACA-CCCCCCCGACC--CCCCCAATCGTCGTAACCCCAATGCCATCGGTCAGGTTCT
584 AAGTGTACA-AGATTTTGTGACCATTTGAAAAAAGT-GT--CCCC-AT---TTCAGACACTTTAA
* * * * * * ** * ***
15927983 TCGGC-AATGGTGTCTTGGCGAA---GAAAAATAC-GACA--C-CAGTACA---TGCCCGAG--C
641 T-GGCTACT-G-G-C--AGCAAACCTGTAAAAT-CTCAAATGCTCTTTA-AGGGGGTGTGAGTTC
* * ** * * ** * ** ** * ** ** ** ** * *
15928035 CCAACATGTGCTGCCGTA-ACCCTCGGTTC--TGTCTGATCTTAG-ACTGGGA---AT-GAAC-T
698 TCGAGGTTTGATGAGGGATA---GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
** *** * ** * * *** * ** *
15928091 C-TGTATGC-CTA--AGTCGACCCACGAAACTAGCGTGCGGGTGCTCAATCGGCCAGAGGGGCAG
760 CATGTGCGCAC-ACCCCCCGGCCC-C--CCCGATCGT-CGGAACCCCAAT--GCC-GTCGGTCAG
* * * * *** * ** ** * * * **
15928152 G--ATGC-AC-A---AG--CCG--G-GGATCGA-CCGGGTCCCCCTC-TACGTTTTG-CC-G-AT
817 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGC-CTGAGCCCAGCAT
15928200 CG
881 -G
**
15928202 TGCTGCCGCAACCCTCGGTCTGGTCTAATCTTAGACT-GGAATG-A-------------------
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
15928246 ------ACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCTAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
** * ** * * ** * *
15928305 GGCTAGATGCGCAAGCCGGGGATTGGTCAAGTCCCCTTCTGTGTGCTATCGATCCTGCTACCGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* ** * * * *
15928370 ACCCTCAGTCCAGTCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAGGCCAACCAACGAAAC
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* ** * * * * *
15928435 GAGCGGGCGGGCGGGCATTTTGTCGGCCATAAAGGCGGGACGCCCAAGCCGTGGATCGATAGGGT
261 GA----GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGT
*
15928500 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATACCATTTTTCTGGCTTGTAAA
322 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAA
* * * *
15928565 TTCATACAATCGTCCCTTAACCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTT
387 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * *
15928630 TCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAAGAGTTTTGGCC
452 TCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCC
* * * *
15928695 CCAAACTTGGTAGACGTGATCCCTGTATTTTTGTAGGCATGCACAAAGAAATTCAACTAAAAACT
517 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * **
15928760 TGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCGTATTTCAGACACTTTAATGGCTA
582 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * *
15928825 CTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGGTGA
647 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* *
15928890 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCATGTCCGCACACCCCC
712 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * * * * **
15928955 CATGACCCCCCC-ACTCGTCGTAACCCCAATGTCGCCGGTCAGGTTCTCCGGCAATGGTGTCTTG
777 C--GGCCCCCCCGA-TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCG
* * * *
15929019 GCGAAGAAAAATACGGCACCAGTACATGCCTGAGCCCAACATG
839 ACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * *
15929062 TGCTGCCGCAACCCTTGGTTCT-ATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTG
1 TGCTGCCGCAACCCTCGG-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * *
15929126 GGAATGAACTCTGTATGCCTCAA-TCGACCCACGAAACTAGCGTGCGGGTGCTCAACCGGCCAGA
65 GGAATGAACTCCGTATGCCT-AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * ** * ** * * *
15929190 GGGGCAGGATGCACAAGTCGGGGATCGACCGGGTCCCCCTCTACGTTTTGCCAATCTTGTTGCCG
129 GGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
*
15929255 CAACCCTCGGTCTGGTCTGATCTTAGACT-GGAATGAAATCCGTATGCCTAAGCCAACCGACGAA
194 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
15929319 ACGAGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCAGGATGCGCAAGCCATGGATCGA
259 A--TG-A-----GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
*
15929384 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCT
316 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
* * *
15929449 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGACGACTCATTTTT
381 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * *
15929514 TATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTTAAA----TT---------TT
446 TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* *
15929566 TTGGCCGCAAAGTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
511 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
15929631 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAA
576 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * * * *
15929696 TGGCTACTGGCATCGAACCTGTAAAATCGCAAATTCTCTTTAAGGGGGTTTGAGTTCTCGAGGTT
641 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* **
15929761 TGAGGAGGGATAGGGCACCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
706 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * ** * * *
15929826 ACCCCTCCCCTGGCCGCCCTGATCATCGGAACCGTAATGACGCCGGTCAGGTTCTCCGGCGATGG
771 A--CC-CCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
** * *
15929891 TGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
832 TGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * *
15929941 TGCTACCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
*
15930006 GAATGAACTCTGTATGCCTAAGTCAACCCACG-AACTGAGCGTGCGGGCGCTCAGCCGAG-CAGA
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC-GAGCGTGCGGGCGCTCAGCCG-GCCAGA
** * ** * * * *
15930069 GGGGTC-AAATGCGCAAGCCGAGGATCGACCGGGTCGCTCTCCGCGTGCTGTCGATCCTGCTG-C
129 GGGG-CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCC
* * * * *
15930132 GTTAGCCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCTAACCGACG
193 G-CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* **
15930197 AAACGAACGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCATGATGCGCAAGCCGTGGATC
257 AAATG-A---GC--G--GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* * *
15930262 GATAGAGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAG
314 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
15930327 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
379 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** * * * *
15930392 TCTATTTTTCACGATTTTCAAAACTTTTTACTGTTTGAGATTTTATAAAATTTTTTCAGAAGGAG
444 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
*
15930457 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGC
509 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
15930522 TAAAAACTCGTAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTT
574 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
15930586 AATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-AGGGTGT-ATGTTCTCAAG
639 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA-GTTCTCGAG
* *
15930649 GTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCG
703 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * *
15930714 CACACCCCCC--CCGCCCCCTAATCGTCGGAACCCCAATACCGTCGGTCAGGTTTTCCGACAATG
768 CACACCCCCCGGCC-CCCCC-GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATG
** *
15930777 GTGTCCCGACGAAGAAAAATATGGCACCAGCACATGCCTGAGCCCAGTATG
831 GTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * * * * *
15930828 TGCTGTCGTAATCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTGGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
15930893 GAATAAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGTGTGCTCAGCCGACCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * ** * * * *
15930958 GGTGGGATGCGCAAGCCGAGGATCGG-CTGGGTCCCCCTCTATGTGCTGTCGATCCTACTACCAC
131 GGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * * * * * *
15931022 AACCCTTGGTCTGATCCGATCTTACACTAGGAATGAACTCTGTATGCCTAAGCCAACTGACGAAA
195 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * ** *
15931087 CGAACGGGCGGGCACTGCGTTGGCCAGATAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
260 TGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
15931152 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTTTAGCTTGTAAATTC
325 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
15931217 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
390 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * ***
15931282 TGATTTTTAAAACTTTTTACTGTTCGGGATTTTTTAAAATTTTTTCAGAAAGA-TTTTTTACCCA
455 TGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* * *
15931346 AACCTGGTAGACGTGATCCTTGTATTTTTCTAGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
520 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* *
15931411 AGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTG
585 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
*
15931476 GCAGCAAA-CTAGTAAAATCTGAAATGCTCTTTAA-GGGGTGTGAGTTC-CTGAGGTTTGATGAG
650 GCAGCAAACCT-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGAG
15931538 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
713 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC
* * ** * * * * *
15931603 CGGCCCCCCCAATCGTCCGAACCCCAATGTGGTCGGTCAGGTTCTTCGGCAATGGTGTCCTGATG
777 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACG
* * * * *
15931668 AAAAAAAATGTGACACCAGCACATGCCCGAGCCCAGTATG
842 AAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * *
15931708 TGCTGCCGCAACCCTTGGTCTGGTCCGATCTGAGACTGGGAATGAACTCTGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15931773 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGGTCAGCCGACCATAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* ** * ** * * ** * *
15931838 GGCAGGATGCGCAAGCCGGGGATCGACCGAGTCTGCCTCTACGTGCTGTCGATCCTATTGCAGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* ** * *
15931903 ACCCTTGGT-TCGGTCCAATCTTACACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAA
196 ACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * ** * *
15931967 CGAGCGGGCGGGCGGACGGGCACTGCATTAGCCAAATAGGCGGGATGCGCAAGCCGTGGATCGAT
260 TGAGCGGGCGGGC--AC---TAC-GC--CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
*
15932032 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATATTTT-TGGCT
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT-TTTTCTGGCT
15932096 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT-
381 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * * *
15932160 TATTTTTCACGATTTTTAAAAATTTTTAAGGTTCGGGATTTTTTAAAATTTTTTCAGAAAGATTT
446 TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * *
15932225 TTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTCTAT-GCATGCACAAAAAGATTCAGCT
511 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACAAAAAAATTCAGCT
*
15932289 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACCTTA
575 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * *
15932354 ATGGGTACTGGCAGCAAACCAGTAAAATCTCAAATGCGCTTTAA-GGGGTGTGAGTTC-CGGAGG
640 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGG
*
15932417 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGC
704 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* *
15932482 ACACCCCCCCGGCCCCCCCAATCGTCGGAACCCCAATGCCGCCGGTCAGG---T---AC------
769 ACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
* * *
15932535 -T-CCGACGAA-AAAAATACAGCACCAGCACATG-CTCGAGCCCAGTATG
833 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCT-GAGCCCAGCATG
* * * * * * *
15932581 TGCTGTCGCAACCCTCAGTTTGGTCCAATCTTAGAGTGGAAATGAACTCCATATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
15932646 GAATGAACTCCG--TGCCTAAGTCAACCCATGAAACGAGCGTACAGGCGCTCAACCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* ** * * * * * *
15932709 GGCGGGATGCACAAGTTGGGGATCGATTGGGTCCCCCTCTGTGTGCTACCAATCCTGCTGCCACA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * * *
15932774 ACCCTCAGTCTGAT-TCGATCTTAGACTAGGAATGAACTCTGTATGCATAAGCCAACTGACGAAA
196 ACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA
* * * *
15932838 CGAGTGAGCGAAAGGGCCGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGAT
259 --A-TGAGC----GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
*
15932903 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCGGCCATGCCAATGCCATTTTTCTGGCTT
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* *
15932968 GTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCTTGGCAAGACGACTCGTTTTCT
382 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* ** * *
15933033 ATTTTTCAAGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAGTTT
447 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
*
15933098 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAA
512 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* *
15933163 AAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCATTTCAGACACTTTAAT
577 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
15933228 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
642 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
*
15933293 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGTGCGCACA
707 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* ** * * * * * *
15933358 CCCCCCCGCCCCCCCGATCACCGAAAACCCTAATGCCGTCAGTCAGGTTCTCTGACGATGATGCC
772 CCCCCCGGCCCCCCCGATCGTCG-GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTC
** * * *
15933423 CCGGTGATGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATG
836 CCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * * *
15933469 TGTTGCCGCAACCCTCGGTCCGGTCGGATCTCAGACTGGGAATGAACTCCGTATGCTTAGACTAG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
15933534 GAATGAAATTCGTATGCTTAAGTCAACCCGCGAAACGAGCGTGCGGGTGCTCAACCAGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * * * * **
15933599 GGTGAGATGCGTAAGCCGAGGATCGGCCGAGTCACCCTCTACGTGCTGCCAATCTTGCTATCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * *
15933664 ACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCTAACCGAAGAAAT
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
* * * *
15933729 GAGTGGGCGAGCAGGCGGGCACTACGCCGACAAGAGAGACGGGATGCGCAAGCCATGGATCGATA
261 GA----GC--G--GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* * * *
15933794 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTAGGCCAATGCAATTTTTTTGGCTTG
318 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
* *
15933859 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGACGACTTGTTTTCTA
383 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * *
15933924 TTTTTCAAGATTTTTGAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
448 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* *
15933989 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCACAAAAAAAATTCACCTAA
513 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAA
* * *
15934054 AAACGCAAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAAT
577 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * * * *
15934119 GGCTATTGGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTT
642 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
15934184 GATGTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA
707 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * * *
15934249 CCCCCC-GCCCCCCCGATCGTCGTAACCCTAATGTCG-CAGGTCAGCTTCTACGGCGATGGTGTC
772 CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATGGTGTC
* * * * *
15934312 CC-AGCGAAGAAAAATACGGTACCAGCACATGCCCGAGCCCAACGTG
836 CCGA-CGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
*
15934358 TG-TAGCTGCAA-CC-C-G-C--G---G----T---CT--G---G---T-CG-AT-CTTAGACTG
1 TGCT-GCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * *
15934395 GGAATGAACTCCGTATGCCTAATTCAACCCACGAAACGAGCGTACAGGCGCTTAGCCGGCCATAG
65 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * * * * * *
15934460 GGACGGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTGCATGCTACCAATCCTACTGCCAC
130 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * * * *
15934525 AACCCTCGGTCTGAT-TCGATCTTAGACTAGGAATGAACTCCATATGCATAAGCCAACCGATGAA
195 AACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * *
15934589 ACGAGCGGGCAGGAGGGTCGACACTACGTCTGCCAGAGAGACGGGATGTGCAAGCTGTGGATCGA
259 ATGAGCGGGC-----GG--G-CACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
*
15934654 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCT
316 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
* * * **
15934719 TGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCTTGGCAAGACGACCCGTTTAA
381 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * *
15934784 AATTTTTCAAGATTTTTAAAACTTTTTAAGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
446 TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * * *
15934849 TTGGCCCCAAACTTGGTAGACGTGATCCTTGCATTTTTGTTGGAAAGCATAAAAAAATTCAGCTA
511 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
15934914 AAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
576 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
15934979 TGGCGACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTGTAAGAGGGTGTGAGTTCTCGAGGTT
641 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* *
15935044 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAGGTGCGCAC
706 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * **
15935109 ACCCCCCCAGCCCCCCCGATCGCCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGGTG-
771 A-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGT
* * *
15935173 CCTCGGA-GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAG
835 CC-C-GACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
* * * * *
15935221 TGCTACCGAAACCCTCGGTCCGGTCCGATCTTTGACTGGGAATGAACTTCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
15935286 GAATGAACTCCGTATGCCTAAGTCAAACCACGAAATGAGCATGTGGGTGCTAAACCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * *
15935351 GGCGGGATGCGCAAGCCGGGGATCGGTTGGGTCCCCCTCTGCCTGCTGTCGATCCTGCTGTCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * *
15935416 ACCCCCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACC-ACGAAA
196 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG-CCAACCGACGAAA
*** * * ** * *
15935480 TGAGTATGTGGGCGCTAAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
260 TGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
15935535 GTTGGGTCCC
Statistics
Matches: 25261, Mismatches: 3849, Indels: 2379
0.80 0.12 0.08
Matches are distributed among these distances:
831 4 0.00
833 2 0.00
834 9 0.00
835 8 0.00
836 21 0.00
837 10 0.00
838 158 0.01
839 20 0.00
840 25 0.00
841 42 0.00
842 29 0.00
843 24 0.00
844 36 0.00
845 40 0.00
846 17 0.00
847 20 0.00
848 133 0.01
849 15 0.00
850 18 0.00
851 5 0.00
852 56 0.00
853 258 0.01
854 160 0.01
855 13 0.00
856 254 0.01
857 33 0.00
858 22 0.00
859 282 0.01
860 247 0.01
861 229 0.01
862 446 0.02
863 614 0.02
864 186 0.01
865 230 0.01
866 285 0.01
867 24 0.00
868 35 0.00
869 26 0.00
870 222 0.01
871 688 0.03
872 355 0.01
873 306 0.01
874 120 0.00
875 300 0.01
876 1285 0.05
877 679 0.03
878 961 0.04
879 1213 0.05
880 745 0.03
881 701 0.03
882 1528 0.06
883 1167 0.05
884 1577 0.06
885 590 0.02
886 575 0.02
887 576 0.02
888 1141 0.05
889 1721 0.07
890 1588 0.06
891 1022 0.04
892 941 0.04
893 520 0.02
894 13 0.00
895 1 0.00
896 5 0.00
897 6 0.00
898 1 0.00
899 4 0.00
900 8 0.00
901 2 0.00
902 4 0.00
903 3 0.00
904 9 0.00
905 1 0.00
906 1 0.00
907 1 0.00
908 2 0.00
909 9 0.00
910 7 0.00
911 5 0.00
912 4 0.00
913 3 0.00
914 7 0.00
915 1 0.00
916 2 0.00
917 13 0.00
918 11 0.00
919 21 0.00
920 2 0.00
921 13 0.00
922 15 0.00
923 5 0.00
924 8 0.00
925 1 0.00
926 5 0.00
929 2 0.00
932 1 0.00
933 1 0.00
935 4 0.00
936 4 0.00
938 2 0.00
939 10 0.00
940 4 0.00
941 2 0.00
942 9 0.00
943 9 0.00
944 7 0.00
945 3 0.00
946 3 0.00
947 1 0.00
948 2 0.00
949 3 0.00
950 5 0.00
951 1 0.00
952 4 0.00
953 7 0.00
954 5 0.00
955 8 0.00
956 10 0.00
957 14 0.00
958 18 0.00
959 7 0.00
960 7 0.00
961 5 0.00
962 2 0.00
963 3 0.00
964 4 0.00
965 2 0.00
967 4 0.00
968 1 0.00
969 3 0.00
972 6 0.00
973 5 0.00
974 1 0.00
975 2 0.00
981 3 0.00
982 1 0.00
984 2 0.00
985 6 0.00
986 57 0.00
987 16 0.00
988 7 0.00
989 12 0.00
990 58 0.00
991 13 0.00
992 20 0.00
993 5 0.00
994 28 0.00
995 14 0.00
996 13 0.00
997 21 0.00
998 25 0.00
999 18 0.00
1000 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (881 bp):
TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAT
GAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGA
AAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
Found at i:15907969 original size:26 final size:26
Alignment explanation
Indices: 15907932--15907984 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15907922 CTGGTCTGAT
*
15907932 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
15907958 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
15907984 C
1 C
15907985 CTAAGCCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCGTATG
Found at i:15908843 original size:26 final size:26
Alignment explanation
Indices: 15908814--15908866 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15908804 CTGGTCCGAA
*
15908814 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15908840 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15908866 C
1 C
15908867 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15910602 original size:26 final size:26
Alignment explanation
Indices: 15910566--15910618 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15910556 TTGGACCGAT
15910566 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15910592 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15910618 C
1 C
15910619 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15911480 original size:26 final size:26
Alignment explanation
Indices: 15911444--15911496 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15911434 CCAGTCTGAT
* *
15911444 CTTAGATTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15911470 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15911496 C
1 C
15911497 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.13, G:0.26, T:0.34
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15913200 original size:26 final size:26
Alignment explanation
Indices: 15913171--15913221 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15913161 CCGGTCTGGT
*
15913171 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15913197 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
15913222 TCCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15914090 original size:26 final size:26
Alignment explanation
Indices: 15914061--15914111 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
15914051 CGGTCCGATC
15914061 TTAGACAGGGAATGAACTCCGTATGG
1 TTAGACAGGGAATGAACTCCGTATGG
*
15914087 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACAGGGAATGAACTCCGTATG
15914112 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.16, G:0.29, T:0.25
Consensus pattern (26 bp):
TTAGACAGGGAATGAACTCCGTATGG
Found at i:15915863 original size:26 final size:26
Alignment explanation
Indices: 15915827--15915879 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15915817 CCAGTTCGAT
* *
15915827 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15915853 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15915879 C
1 C
15915880 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15916739 original size:26 final size:26
Alignment explanation
Indices: 15916703--15916755 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15916693 CTGGTCTGAT
15916703 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15916729 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15916755 C
1 C
15916756 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15917619 original size:26 final size:26
Alignment explanation
Indices: 15917590--15917639 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
15917580 GTCCGATCAC
15917590 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
15917616 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
15917640 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.20, G:0.28, T:0.24
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:15918507 original size:26 final size:26
Alignment explanation
Indices: 15918471--15918523 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15918461 CCGGTCCGAT
*
15918471 CTTAGACTGGGAATGAACTGCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15918497 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15918523 C
1 C
15918524 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15923773 original size:26 final size:26
Alignment explanation
Indices: 15923744--15923796 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15923734 CCGGTCTGAT
**
15923744 CTTAGAATGGGCGTGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
* *
15923770 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
15923796 C
1 C
15923797 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:15925467 original size:26 final size:26
Alignment explanation
Indices: 15925438--15925490 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15925428 CTGGTCCGAT
15925438 CTTAGACGGGGAATGAACTCCGTATG
1 CTTAGACGGGGAATGAACTCCGTATG
*
15925464 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACGGGGAATGAACTCCGTATG
15925490 C
1 C
15925491 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.28, T:0.25
Consensus pattern (26 bp):
CTTAGACGGGGAATGAACTCCGTATG
Found at i:15925892 original size:819 final size:823
Alignment explanation
Indices: 15924627--15927702 Score: 3032
Period size: 878 Copynumber: 3.6 Consensus size: 823
15924617 CTCGATCGGG
* * *
15924627 TCCG-ATG-TTAGACTGGGAATTAACTCCGTTTGCCTAAGTCAACCCACGAAATGAGCGTGCGGG
1 TCCGTATGCTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAATGAGCGTGCGGG
* * * * *
15924690 CGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-AGGTCCCCTTCTGCGTGT
66 CGCTCAGCCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGATCGA-GTCCCCCTCTGCGTGC
* * * * * * *
15924754 TGCCCATCCTACTATCGTAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
130 TGCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGC
* * *
15924819 CTAAGCCAACCGACGAAATGGGCGGGTGGGTGGGCGGGCACTACGTCGGCCAGAGAGGTGGGATG
195 CTAAGCCAACCGACGAAA----C--------GGGCGGGCACTACGCCAGCCAGAGAGGCGGGATG
15924884 CGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
248 CGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
* * *
15924949 ATGCGATTTTTTTGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
313 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * * *
15925014 CAAGGCGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAA
378 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAA
* * * * *
15925079 TTTTTTCAGAAGGTGTTTTGGCCCTAAACTTGGCAGACGTGATCCTTGTGACCATTTGAAAAAAG
443 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGT-ACCTTTTGAAAAAA-
* * * *
15925144 TGTCCCCATTTCAAACACTTTAAGGGCTACTGGCA-GCAAACCTGTAAAATCTCAAACGCTCTTT
506 TGTCCCCATTTCAAAAACTTAAAGTG-TACTGGCATG-AAACCTGTAAAATCTCAAACGCACTTT
* * * * * * ** ** *
15925208 AA-GG-GG-G-TGTGAGTTCTC-GA-GGTTTGATGAGGGATAG-GGGGCCA-ATATA-AGGGCCA
569 AATGGCGGAGATGTAAATTCTCAAATGCTTTAAAG-GGGATAGTGGGGTGAGGGATAGGGGGCCA
* *
15925264 AGTACCAGCACCCATCGCACATCATGTGCGCTCACCCCCCCGGTCCCCCCCATCGTCGGAACCCT
633 AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCTCCCCCCCATCGTCGGAACCC-
* * * *
15925329 AATGTCGTCGGTCAGGTTCTCCGAT-GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
697 AATGCCGCCGGTCAGGTTATCCG-TCGATGGTGTCCCGACGAAGAAAAATGCTGCACCAGCACAT
* * * * * * *
15925393 GCCCGAGCCCAGTATGTGCTGTCGTAACCCTCGGTCTGGTCCGATCTTAGACGGGGAATGAAC
761 GCTCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTGCAATCTTAGACTGGGAATGAAC
* ** * *
15925456 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCGTGAAACGAGCATGCGGG
1 TCCGTATGCTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAATGAGCGTGCGGG
* * * * * * * *
15925521 TGCTCAACCGGCCAGATGGGCAGGATGCTCATGTCAGGGTTCGATCGAGTCCCCCTCTGCGTGCT
66 CGCTCAGCCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGATCGAGTCCCCCTCTGCGTGCT
* ** * * * * * *
15925586 GCCGATCCTGCTGTCACAACCCTCGGTCCGGTCCTATCTTAGACTGGGAATGAACTCCATATGCC
131 GCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGCC
* * *
15925651 TAAGCCAACCGACGAAACGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCATGGA
196 TAAGCCAACCGACGAAACGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
15925716 TCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
261 TCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
* * ** *
15925781 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCGTGTCAAGTTTCATGGCAAGACGGTTTGT
326 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
* * *
15925846 TTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTTTCAGAAAG
391 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTCAGAAGG
* * * ***** ** *
15925911 ATTTTTGGCCCCAATCTTGGTTGACATGATCCTTGTA-CTTTTGTTGGCATGCATAAAACAATTC
456 AGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTACCTTTTGAAAAAATG--T--CCCCATT-
* * ** *** * *
15925975 AGCTAAAAACTTGAAGTGTACAAAATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGA--C
516 -TC-AAAAACTTAAAGTGTAC-------TG-G--CA--TG--AAACCTGT-AAAATCTCAAACGC
* * *
15926038 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTC
564 ACTTTAATGG---C-GG-AG---A--TGTAAATTCTCAAATGCT-TTAAAGGGG-AT-AG---T-
*
15926103 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGT
612 G-GG---G-TGAGGGATA---GG---------GGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * * *
15926168 GCGCACATCCCCCCAGTTCCCCCCCGTTGCCGGAAACCCAATGCCACCGGTCAGGTTATCCGTCG
660 GCGCACA-CCCCCCCGCTCCCCCCCATCGTCGG-AACCCAATGCCGCCGGTCAGGTTATCCGTCG
15926233 ATGGTGTCCCGACGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCGCAA
723 ATGGTGTCCCGACGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCGCAA
15926298 CCCTCGGTCCGGTGCAATCTTAGACTGGGAATGAAC
788 CCCTCGGTCCGGTGCAATCTTAGACTGGGAATGAAC
* * * *
15926334 TCCGTATGCTTAGATTGGGAATGAACTCTGTATACCTAAGTCAACCCACGGAATGAGCGTTCGGG
1 TCCGTATGCTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAATGAGCGTGCGGG
* *
15926399 CGCTCAGGCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATC-AGTCGGGTCCCCCTCTGCGTGC
66 CGCTCAGCCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGA-TCGAGTCCCCCTCTGCGTGC
*
15926463 TTCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGC
130 TGCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGC
* * * *
15926528 CTAAGGCAACTGACGAAACGGGCGGGTACTATGCCAGCCAGAGAGGCGGGATGCGCAAGCCGTGG
195 CTAAGCCAACCGACGAAACGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGCAAGCCGTGG
* *
15926593 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATACCATTTTTC
260 ATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
* *
15926658 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC-AGTTT
325 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA-CTC
* *
15926722 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTTTCAGAA
389 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTCAGAA
* * * * * ***** *
15926787 AGAGTTTTGGCCCCAATCTCGGTTGACGTGATCCTTGTA-CTTTTGTTGGCATG-CACAAAACAA
454 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTACCTTTTGAAAAAATGTC-C----CCA
* * ** ** * * **
15926850 TTCAGCTAAAAACTCAAAGTGTACAAG-ATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAG
514 TT--TC-AAAAACTTAAAGTGTACTGGCA---TGAAACC---TG--TAAAA--T-CTCA-AAC-G
* *
15926914 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATT-TCAAATGCTCTTTAAGGGGTGTGAGTT
563 -CACTTTAATGG---C-GG-AG---A--TGT-AAATTCTCAAATGCT-TTAAAGGGG-AT-AG--
*
15926978 CTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
611 -T-G-GG---G-TGAGGGATA---GG---------GGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
15927043 TGTGCGCACATCCCCCCGTTCCCCCCCGTTGCCGGAACCCCAATGCCGCCGGTCAGGTTATCCGT
657 TGTGCGCACACCCCCCCGCTCCCCCCCATCGTCGGAA-CCCAATGCCGCCGGTCAGGTTATCCGT
*
15927108 CGATGGTGTCCCGACGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGC
721 CGATGGTGTCCCGACGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCGC
15927173 AACCCTCGGTCCGGTGCAATCTTAGACTGGGAATGAAC
786 AACCCTCGGTCCGGTGCAATCTTAGACTGGGAATGAAC
* ** * *
15927211 TCCGTATGCTTAGATTATGAATGAACTCCGTATACCTAAG-CTAACCCACGGAATGAGCGTTCGG
1 TCCGTATGCTTAGACTGGGAATGAACTCCGTATACCTAAGTC-AACCCACGAAATGAGCGTGCGG
* * *
15927275 GCGCTTAGCCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGCGTGC
65 GCGCTCAGCCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGATCGAGTCCCCCTCTGCGTGC
*
15927340 TTCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGC
130 TGCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGC
* * * *
15927405 CTAAGGCAACCGATGAAACGGGCGGGTACTATGCCAGCCAGAGAGGCGGGATGCGCAAGCCGTGG
195 CTAAGCCAACCGACGAAACGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGCAAGCCGTGG
* *
15927470 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCAATTTTTC
260 ATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
* * *
15927535 TAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGGTTCATGGCAAGATGACTCG
325 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* *
15927600 TTCTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAATTTTTTCAGAAG
390 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTCAGAAG
*
15927665 GAGTTTTGGCCCAAAACTTGGTAGACATGATCCTTGTA
455 GAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA
15927703 TTTTTTTTTG
Statistics
Matches: 1950, Mismatches: 200, Indels: 146
0.85 0.09 0.06
Matches are distributed among these distances:
816 2 0.00
817 6 0.00
818 2 0.00
819 254 0.13
820 4 0.00
822 4 0.00
823 11 0.01
827 1 0.00
829 6 0.00
830 4 0.00
831 172 0.09
832 3 0.00
835 8 0.00
836 8 0.00
837 6 0.00
841 2 0.00
843 1 0.00
849 8 0.00
850 1 0.00
851 5 0.00
852 5 0.00
853 2 0.00
858 1 0.00
859 2 0.00
862 1 0.00
863 1 0.00
864 3 0.00
866 1 0.00
867 1 0.00
868 4 0.00
869 2 0.00
870 2 0.00
872 1 0.00
873 2 0.00
876 3 0.00
877 653 0.33
878 749 0.38
879 9 0.00
ACGTcount: A:0.24, C:0.24, G:0.25, T:0.27
Consensus pattern (823 bp):
TCCGTATGCTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAATGAGCGTGCGGG
CGCTCAGCCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGATCGAGTCCCCCTCTGCGTGCT
GCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAACTCCGTATGCC
TAAGCCAACCGACGAAACGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTCAGAAGG
AGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTACCTTTTGAAAAAATGTCCCCATTTCAAA
AACTTAAAGTGTACTGGCATGAAACCTGTAAAATCTCAAACGCACTTTAATGGCGGAGATGTAAA
TTCTCAAATGCTTTAAAGGGGATAGTGGGGTGAGGGATAGGGGGCCAAGTACCAGCACCCATCGC
ACATCATGTGCGCACACCCCCCCGCTCCCCCCCATCGTCGGAACCCAATGCCGCCGGTCAGGTTA
TCCGTCGATGGTGTCCCGACGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCCAGCATGTGCT
GTCGCAACCCTCGGTCCGGTGCAATCTTAGACTGGGAATGAAC
Found at i:15926345 original size:26 final size:26
Alignment explanation
Indices: 15926316--15926366 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
15926306 CCGGTGCAAT
15926316 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
15926342 CTTAGATTGGGAATGAACTCTGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
15926367 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15927222 original size:26 final size:26
Alignment explanation
Indices: 15927193--15927243 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
15927183 CCGGTGCAAT
*
15927193 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
15927219 CTTAGATTATGAATGAACTCCGTAT
1 CTTAGACTAGGAATGAACTCCGTAT
15927244 ACCTAAGCTA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.18, G:0.22, T:0.31
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:15928339 original size:158 final size:158
Alignment explanation
Indices: 15928042--15928447 Score: 474
Period size: 158 Copynumber: 2.6 Consensus size: 158
15928032 AGCCCAACAT
* *
15928042 GTGCTGCCGTAACCCTCGGTTCTGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCG
1 GTGCTGCCGTAACCCTCGG-TCTGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * *
15928107 ACCCACGAAACTAGCGTGCGGGTGCTCAATCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCG
65 ACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCG
** ** *
15928172 ACCGGGTCCCCCTCTACGTTTTGCCGATC
130 ACCAAGTCCCCCTCTACGTGCTACCGATC
* *
15928201 GTGCTGCCGCAACCCTCGGTCTGGTCTAATCTTAGACT-GGAATGAACTCCGTATGCCTAAGTCA
1 GTGCTGCCGTAACCCTCGGTCT-GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * *
15928265 ACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCTAGAGGGGCTA-GATGCGCAAGCCGGGGATT
65 ACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGC-AGGATGCACAAGCCGGGGATC
** * ** *
15928329 GGTCAAGTCCCCTTCTGTGTGCTATCGATC
129 GACCAAGTCCCCCTCTACGTGCTACCGATC
* * * * * * *
15928359 CTGCTACCGTAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAGGCCA
1 GTGCTGCCGTAACCCTCGGT-CTGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* *
15928424 ACCAACGAAACGAGCGGGCGGGCG
65 ACCCACGAAACGAGCGTGCGGGCG
15928448 GGCATTTTGT
Statistics
Matches: 208, Mismatches: 35, Indels: 8
0.83 0.14 0.03
Matches are distributed among these distances:
158 130 0.62
159 78 0.38
ACGTcount: A:0.21, C:0.29, G:0.29, T:0.21
Consensus pattern (158 bp):
GTGCTGCCGTAACCCTCGGTCTGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
CCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGA
CCAAGTCCCCCTCTACGTGCTACCGATC
Found at i:15929127 original size:26 final size:26
Alignment explanation
Indices: 15929091--15929143 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15929081 TCTATCCGAT
15929091 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15929117 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
15929143 C
1 C
15929144 CTCAATCGAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:15929999 original size:26 final size:26
Alignment explanation
Indices: 15929970--15930022 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15929960 CCGATCCGAT
15929970 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15929996 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15930022 C
1 C
15930023 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15931558 original size:879 final size:882
Alignment explanation
Indices: 15925124--15935534 Score: 8237
Period size: 878 Copynumber: 11.7 Consensus size: 882
15925114 GACGTGATCC
* *
15925124 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAGGGCTACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15925189 AAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
66 AAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* *
15925254 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCTCACCCCCCCGGTCCCCCCC-ATC
130 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCG-CCCCCCCAATC
* * ** *
15925318 GTCGGAACCCTAATGTCGTCGGTCAGGTTCTCCGATGATGGTGTCCCGACGAAGAAAAATGCGGC
194 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGC
* * * * *
15925383 ACCAGCACATGCCCGAGCCCAGTATGTGCTGTCGTAACCCTCGGTCTGGTCCGATCTTAGACGGG
259 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
* **
15925448 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCGTGAAACGAG
324 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * * * * * * * * *
15925513 CATGCGGGTGCTCAACCGGCCAGATGGGCAGGATGCTCATGTCAGGGTTC-GATCGAGTCCCCCT
389 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCT
* * * * *
15925577 CTGCGTGCTGCCGATCCTGCTGTCACAACCCTCGGTCCGGTCCTATCTTAGACTGGGAATGAACT
453 CTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACT
*
15925642 CCATATGCCTAAGCCAACCGACG--A--A-ACGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
518 CCGTATGCCTAAGCCAACCGACGAAACGAGACGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
* *
15925702 GCGCAAGCCATGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
583 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* *
15925767 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCGTGTCAAGTTTCATG
648 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
** * * * * *
15925832 GCAAGACGGTTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTTAA
713 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * * * *
15925897 ATTTTTTCAGAAAGATTTTTGGCCCCAATCTTGGTTGACATGATCCTTGTACTTTTGTTGGCATG
778 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * * *
15925962 CATAAAACAATTCAGCTAAAAACTTGAAGTGTACAAAATT
843 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15926002 TTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
15926067 AAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
66 AAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * * *
15926132 TAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACATCCCCCCAGTTCCCCCCC-GTT
131 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCG--CCCCCCCAATC
* * ** * * * *
15926196 GCCGGAAACCCAATGCCACCGGTCAGGTTATCCGTCGATGGTGTCCCGACGAAGAAAAATGCTGC
194 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGC
* * * *
15926261 ACCAGCACATGCTCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTGCAATCTTAGACTGG
259 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
* * * * * *
15926326 GAATGAACTCCGTATGCTTAGATTGGGAATGAACTCTGTATACCTAAGTCAACCCACGGAATGAG
324 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * * *
15926391 CGTTCGGGCGCTCAGGCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCAG-TCGGGTCCCCCT
389 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCT
* * * * * *
15926455 CTGCGTGCT-TCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAAC
453 CTGCGTGCTGT-CGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAAC
* * * * * *
15926519 TCCGTATGCCTAAGGCAACTGACG--A--A-ACGGGCGGGTACTATGCCAGCCAGAGAGGCGGGA
517 TCCGTATGCCTAAGCCAACCGACGAAACGAGACGGGCGGGCACTACGTCGGCCAGAGAGGCGGGA
15926579 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
582 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
*
15926644 CAATACCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
647 CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * * * * *
15926709 GGCAAGAC-AGTTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTT
712 GGCAAGACGA-CTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTA
* * * * *
15926773 AAATTTTTTCAGAAAGAGTTTTGGCCCCAATCTCGGTTGACGTGATCCTTGTACTTTTGTTGGCA
776 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* *
15926838 TGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACAAGATT
841 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15926880 TTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15926945 AAAATTTCAAATGCTCTTTAAGGGGTGTGAGTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATA
66 AAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * *
15927010 TAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA-TCCCCCCGTTCCCCCCC-GTT
131 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCG--CCCCCCCAATC
* * * * * *
15927073 GCCGGAACCCCAATGCCGCCGGTCAGGTTATCCGTCGATGGTGTCCCGACGAAGAAAAATGCTGC
194 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGC
* * *
15927138 ACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTGCAATCTTAGACTGG
259 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
* * ** * * *
15927203 GAATGAACTCCGTATGCTTAGATTATGAATGAACTCCGTATACCTAAG-CTAACCCACGGAATGA
324 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC-AACCCACGAAACGA
* * * * *
15927267 GCGTTCGGGCGCTTAGCCAGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGG-TCGGGTCCCCC
388 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCC
* * * * * *
15927331 TCTGCGTGCT-TCCGATCCTACTACCGCAACCCTCAGTCCGATCCGATCTTAGACTGGAAATGAA
452 TCTGCGTGCTGT-CGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAA
* * * * * *
15927395 CTCCGTATGCCTAAGGCAACCGATG--A--A-ACGGGCGGGTACTATGCCAGCCAGAGAGGCGGG
516 CTCCGTATGCCTAAGCCAACCGACGAAACGAGACGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
15927455 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
581 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
* * *
15927520 CCAATGCAATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGGTTCA
646 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * * *
15927585 TGGCAAGATGACTCGTTCTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTT
711 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTA
* * * *
15927650 AAATTTTTTCAGAAGGAGTTTTGGCCCAAAACTTGGTAGACATGATCCTTGTATTTTTTTTTGCA
776 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
15927715 TGCACAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATT
841 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * *
15927757 TTGTGGCCATTTGAAAAAAAGTGTTCCCATTTCAGACACTTGAATGGCTACTGGCAGCAAACCTA
1 TTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
15927822 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGGTGAGGGATAGGGGGCCAA
65 TAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* *
15927887 TATAAGGGCCAAGTACCAGCACCTATCACACATCATGTGCGCACA-CCCCCCCGACCCCCCCAAT
129 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCG-CCCCCCCAAT
* * * * ** * *
15927951 CGTCGTAACCCCAATGCCATCGGTCAGGTTCTTCGGCAATGGTGTCTTGGCGAAGAAAAATACGA
193 CGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGG
* * *
15928016 CACCAGTACATGCCCGAGCCCAACATGTGCTGCCGTAA-CC-C--T-C-G---G---TT---CT-
258 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* * *
15928065 -G--T---C-T-G-AT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCGACCCACGAAACTA
323 GGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* ** * * * *
15928120 GCGTGCGGGTGCTCAATCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGACCGGGTCCCCCT
388 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCT
* ** * * * * **
15928185 CTACGTTTTGCCGATCGTGCTGCCGCAACCCTCGGTCTGGTCTAATCTTAGACT-GGAATGAACT
453 CTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACT
* * * * * * * * **
15928249 CCGTATGCCTAAGTCAACCCATGAAACGAG-CGTGCGGGCGCT-CAGCCGGCTAGAGGGGCTAGA
518 CCGTATGCCTAAGCCAACCGACGAAACGAGACGGGCGGGCACTAC-GTCGGCCAGAGAGGCGGGA
* * * * ***** ** * * * * ** * * ** *
15928312 TGCGCAAGCCGGGGATTGGTCA-AGT-CCCCTTCTGTGT--GC-TATCGATCCTGCTACCGTAAC
582 TGCGCAAGCCGTGGATCGAT-AGGGTGGTAGGTGGGTTTAGGCACATC-TTCATATTTCTGCCAT
* * ** * ** ** * * * ** *
15928372 CCTCAGT-CCAGTCTGATCTTAGAC-TGGGAATAAACTCCGTAT-G--CC-TAGGCCAACCAACG
645 GC-CAATGCCA-T-TTTTC-T-GGCTTGTAAATTCA-TAC-AATGGTCCCTTAAGCC-TTC-ATG
* ** * * * * * **** ** ***** **
15928431 -AAACG-AGC-GGGC-GGGCGGGCAT--TTTGTCGGCCATAAAGGCGGGACGCCCAAGCCGTGGA
701 TGAA-GTTTCATGGCAAGAC-GAC-TCGTTT-T---CTAT-TTTTCACGATTTTTAAAAC-T---
** * * ** ** ** * *
15928490 TCGATA-GGGT-GGTAGGTGGGTTTAGGCACATCTTC---A-TA-TTTCT-GCCATGCCAATACC
754 T-TTTACGGTTCGG--GAT-TTTTTA-AAATTTTTTCAGAAGGAGTTT-TGGCC---CCAA-A-C
** * * * * *** * *** ** * * *** **
15928547 ATTTTTCTGGCTTGTAAATTCATACAATCGTCCCTTAACCCTTCACGTGAAGTTTCATGGC-AAG
808 -TTGGT-AGAC--GT-GA-TCCTTGTAT-TTTTGTT-GGCATGCACAAAAAAATTCA--GCTAA-
* * * * * *
15928611 ATGACTCGTTTTCTATTTTTCACGATT
862 A-AACTCG-----AAGTGTACAAGATT
* ** ** *** * * * * ** **
15928638 TT-TGA-AACTTT--TTACGGT-TCGGGATTTTTTA-AAATTTTTTTAGAAAGAG-TTTTGGCCC
1 TTGTGACCA-TTTGAAAAAAGTGTCCCCA--TTTCAGACA---CTTT--AATG-GCTACTGGCAG
* ** * ** * * * ** * * ** ***
15928696 CAAACTTGGTAGACGTGATC-CCTGTATTTTTGTAGGCATGCACAAAGAAATTCAACTAAAAACT
57 CAAACCT-GTA-AAAT-CTCAAATG-CTCTTT-AAGGGGTG-----TG-AGTT---CTCGAGGTT
** ** * * * ** * ** * *
15928760 TGAAGTGTACAAGATTTTGTGACC-ATTTGAA---AAAAGTATCC-GTA--TTTCAGACACTTTA
108 TG-A-TG-A-GGGA-TAGGGGGCCAATAT-AAGGGCCAAGTA-CCAGCACCCATC-G-CAC-ATC
* *** ** *** ****** * ** * ** *
15928818 ATG-GC-TACTGGCAGCAAACTTGTAAAATC-TC-AAATGCTCTTTAAGGGGGTGTGAGTTCCCG
163 ATGTGCGCACACCCCCCCCGCCCCCCCAATCGTCGGAA--C-C-CCAATGCCGT-CG-G-T--C-
** * ** * ** ** * *
15928879 AGGTT-TGGTGAGGGATAGG-GGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCATG
218 AGGTTCT-CCG-GCGAT-GGTGTCCCGA-CGAA--GAAAAATA-CGGCAC-CA--G--CA-CATG
* * ** * * * * * * * * * ** * *
15928942 TCCGCACACCCCCCATG-AC-CCCCCCACTCGTC-GTAACC---CCAAT-GTCG-CCGGTCAGGT
270 CCCG-A-GCCCAGCATGTGCTGCCGCAAC-CCTCGGT--CCGGTCCGATCTTAGACTGGGAATGA
* * * * * * * *
15928999 TCTCCGGCAATG-GT-GTCTTGGCGAA-GAAAAATACGGCACCAGTACATGCCTGAGCCCAACAT
330 ACTTC-G-TATGCTTAGAC-TGG-GAATG----A-A---CTCC-GT--ATGCCTAAG-TCAAC--
* ** * *** * * ** *** * * **
15929061 GTGCTGC-CGCAACCCTTG-GTTCTATCCGATCTTAGACTGGGAATGA-ACTCTGTATGC-TTAG
377 ---C--CACG-AA-ACGAGCGTGC-GGGCG--CTCAG-CCGGCCA-GAGGGGCGGGATGCGCAAG
* * * ** *** * *** ** *
15929122 ACTGGGAAT-GAACTCTGTATGCCTCAAT-CG-ACCCACGAAACTAGCGTGCGGGTGCTCAACCG
430 -CCGGGGATCG-GCTGGGTCCCCCTC--TGCGTGCTGTCGATCCT-GC-TGC-----CACAACC-
* * * * * * * * * * * **
15929184 GC-CAGAGGGGCAGGATGC-A-C-AAGTC-GGGGATCGACCGGGTCCCCCTCTACGTTTTGCCAA
483 -CTC----GGTC-TGATCCGATCTTAGACTGGGAAT-GAAC---T--CCGTATGC-CTAAGCCAA
* * * *** * * * * ** * *
15929244 TCTTGTTGCCGCAAC-CCTCGGTCTGGTCTGATCTTA-GACTGG-AATGA-AATCCGTATGC-CT
535 -C----CGACGAAACGAGACGGGC-GGGC--A-C-TACGTC-GGCCA-GAGAGGCGGGATGCGC-
*** * ** ** * ** ** * *** * *
15929304 AAGCCAACCGA-CGAAACGAGCAGGCGGGCGGG--CGGGCACTACGTCGGCCAGAGAGGCAG-GA
587 AAGCC-GTGGATCGATA-G-GGTGGTAGGTGGGTTTAGGCAC-A--TC-TTCATA-TTTCTGCCA
*** * *** * *
15929365 TGCGCAA-GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTACCAT
644 TGC-CAATGCCATTTTTC--T-GGCT--T--GT-AAATT-----CA--TACA-ATGGTC--CC-T
* * * * * * **
15929428 GCCAATGCCATTTTTC-TGGCTTGTAA-ATTCAT-ACAATGGTC-CCTTAAGCCTTC-ATGTGAA
689 --TAA-GCC----TTCAT-G--TG-AAGTTTCATGGCAA--GACGAC-T-CGTTTTCTAT-T---
***** ** * *** ** *
15929488 GTTTCACGGCAAGACGACTCATTTTTTATTTTTCACGA-TTTTTAAAACTTTTTACGGTTCGGGA
735 -TTTCAC-G-ATTTTTA-AAACTTTTTACGGTTCGGGATTTTTTAAAA--TTTT----TTC-AGA
* * * *
15929552 TTTTTTTA-AATTTTTTGGCCGCAAAGTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
789 -------AGGA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
15929616 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
846 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * *
15929653 TTGTGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCATCGAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * * **
15929718 AAAATCGCAAATTCTCTTTAAGGGGGTTTGAGTTCTCGAGGTTTGAGGAGGGATAGGGCACCAAT
66 AAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* **
15929783 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTCCCCTGGCCGCCCTGA
130 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCCC--GCCCCCCCAA
* ** * * **
15929848 TCATCGGAACCGTAATGACGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACG
192 TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACG
* * *
15929913 GCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGATCCGATCTTAGACT
257 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
* *
15929978 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACG-AACT
322 GGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC-
** * * * *
15930042 GAGCGTGCGGGCGCTCAGCCGAG-CAGAGGGGTC-AAATGCGCAAGCCGAGGATCGACCGGGTCG
386 GAGCGTGCGGGCGCTCAGCCG-GCCAGAGGGG-CGGGATGCGCAAGCCGGGGATCGGCTGGGTCC
* * *** * * * *
15930105 CTCTCCGCGTGCTGTCGATCCTGCTGCGTTAGCCCTCAGTCTGGTCTGATCTTAGACTGGGAATG
449 CCCTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATG
* * * *
15930170 AACTCCGTATCCCTAAGCTAACCGACGAAACGAACGGGCGGGCAGGCGGGCACTACGCCGGCCAG
514 AACTCCGTATGCCTAAGCCAACCGACGAAACG-A--GAC--G--GGCGGGCACTACGTCGGCCAG
** * *
15930235 AGAGGCATGATGCGCAAGCCGTGGATCGATAGAGTGGTTGGTGGGTTTAGGCACATCTTCATATT
572 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
*
15930300 TCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
637 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * *
15930365 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACTGTTTGA
702 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGG
*
15930430 GATTTTATAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
767 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
15930495 TTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGTAGTGTACAAGATT
832 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15930546 TTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * *
15930610 AAAATCTCAAATGCTCTTTAAAGGGTGT-ATGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAGT
66 AAAATCTCAAATGCTCTTTAAGGGGTGTGA-GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* *
15930674 ATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCCG-CCCCCTAATCG
130 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGCCCCCCCAATCG
* * * * *
15930738 TCGGAACCCCAATACCGTCGGTCAGGTTTTCCGACAATGGTGTCCCGACGAAGAAAAATATGGCA
195 TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCA
* * * * * *
15930803 CCAGCACATGCCTGAGCCCAGTATGTGCTGTCGTAATCCTCGGTCCGGTCTGATCTTAGACTGGG
260 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG
* * *
15930868 AATGAACTTCGTATGCTTGGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACTAGC
325 AATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * *
15930933 GTGCGTGTGCTCAGCCGACCAGAGGGGTGGGATGCGCAAGCCGAGGATCGGCTGGGTCCCCCTCT
390 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCT
** * * * * * *
15930998 ATGTGCTGTCGATCCTACTACCACAACCCTTGGTCTGATCCGATCTTACACTAGGAATGAACTCT
455 GCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCC
* * * *
15931063 GTATGCCTAAGCCAACTGACGAAACGA-ACGGGCGGGCACTGCGTTGGCCAGATAGGCGGGATGC
520 GTATGCCTAAGCCAACCGACGAAACGAGACGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGC
*
15931127 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAA
585 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAA
* *
15931192 TGCCATTTTTTTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
650 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
* *
15931257 AAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACTGTTCGGGATTTTTTAAAAT
715 AAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAAT
* *** * * *
15931322 TTTTTCAGAAAGA-TTTTTTACCCAAACCTGGTAGACGTGATCCTTGTATTTTTCTAGGCATGCA
780 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
*
15931386 CAAAAAAATTCAGCTAAAAACTCGAAGCGTACAAGATT
845 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15931424 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAA-CTAG
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT-G
*
15931488 TAAAATCTGAAATGCTCTTTAAGGGGTGTGAGTTC-CTGAGGTTTGATGAGGGATAGGGGGCCAA
65 TAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAA
*
15931552 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCAATC
129 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGCCCCCCCAATC
* ** * * * * * ** *
15931617 GTCCGAACCCCAATGTGGTCGGTCAGGTTCTTCGGCAATGGTGTCCTGATGAAAAAAAATGTGAC
194 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGC
* * * *
15931682 ACCAGCACATGCCCGAGCCCAGTATGTGCTGCCGCAACCCTTGGTCTGGTCCGATCTGAGACTGG
259 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
15931747 GAATGAAC-TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
324 GAATGAACTTC-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * * * * **
15931811 GCGTACGGGCGGTCAGCCGACCATAGGGGCAGGATGCGCAAGCCGGGGATCGACCGAGTCTGCCT
388 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCT
* ** * * * * *
15931876 CTACGTGCTGTCGATCCTATTG-CAGTAACCCTTGGT-TCGGTCCAATCTTACACTGGGAATGAA
453 CTGCGTGCTGTCGATCCTGCTGCCA-CAACCCTCGGTCT-GATCCGATCTTAGACTGGGAATGAA
* * ** *
15931939 CTCCGTATGCCTAAGCCAACTGACGAAACGAG-CGGGCGGGCGGACGGGCACTGCATTAGCCAAA
516 CTCCGTATGCCTAAGCCAACCGACGAAACGAGACGGGCGGGC--AC---TAC-G--TCGGCCAGA
*
15932003 TAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
573 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*
15932068 TTGCCATGCCAATGCCATATTTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
638 CTGCCATGCCAATGCCAT-TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* *
15932132 GAAGTTTCATGGCAAGACGACTCGTTTT-TATTTTTCACGATTTTTAAAAATTTTTAAGGTTCGG
702 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGG
* * *
15932196 GATTTTTTAAAATTTTTTCAGAAAGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTT
767 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
15932261 TTCTAT-GCATGCACAAAAAGATTCAGCTAAAAACTCGAAGTGTACAAGATT
832 TTGT-TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * *
15932312 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACCTTAATGGGTACTGGCAGCAAACCAGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15932377 AAAATCTCAAATGCGCTTTAAGGGGTGTGAGTTC-CGGAGGTTTGATGAGGGATAGGGGGCCAAT
66 AAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAAT
* *
15932441 ATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCGGCCCCCCCAATCG
130 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGCCCCCCCAATCG
* * *
15932506 TCGGAACCCCAATGCCGCCGGTCAGG---T------A----CT-CCGACGAA-AAAAATACAGCA
195 TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCA
* * * * ** * * *
15932556 CCAGCACATGCTCGAGCCCAGTATGTGCTGTCGCAACCCTCAGTTTGGTCCAATCTTAGAGTGGA
260 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG
* * *
15932621 AATGAACTCCATATGCTTAGACTGGGAATGAACTCCG--TGCCTAAGTCAACCCATGAAACGAGC
325 AATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * ** **
15932684 GTACAGGCGCTCAACCGGCCAGAGGGGCGGGATGCACAAGTTGGGGATCGATTGGGTCCCCCTCT
390 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCT
* ** * * * * *
15932749 GTGTGCTACCAATCCTGCTGCCACAACCCTCAGTCTGATTCGATCTTAGACTAGGAATGAACTCT
455 GCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCC
* * * *
15932814 GTATGCATAAGCCAACTGACGAAACGAGTGAGCGAAAGGGCCGGCACTACGTCGGCCAGAGAGAC
520 GTATGCCTAAGCCAACCGACGAAACGA--GA-C----GGGCGGGCACTACGTCGGCCAGAGAGGC
* *
15932879 GGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCGGCC
578 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC
*
15932944 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTT
643 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
* * * *
15933009 TCTTGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTCAAAACTTTTTACGGTTCGAGATTTT
708 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTT
*
15933074 TTTAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
773 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
15933139 GCATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATT
838 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15933184 TTGTGACCATTTGAAAAAATTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
15933249 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
66 AAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * *
15933314 ATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGTGCGCACA-CCCCCCCGCCCCCCCGATCA
130 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGCCCCCCCAATCG
* * * * * * * * ** * * *
15933378 CCGAAAACCCTAATGCCGTCAGTCAGGTTCTCTGACGATGATGCCCCGGTGATGAAAAATGCGAC
195 TCG-GAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGC
* * *
15933443 ACCAGCACATGCCCGAGCCCAGCATGTGTTGCCGCAACCCTCGGTCCGGTCGGATCTCAGACTGG
259 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
* * * * * *
15933508 GAATGAACTCCGTATGCTTAGACTAGGAATGAAATTCGTATGCTTAAGTCAACCCGCGAAACGAG
324 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * * * * * * *
15933573 CGTGCGGGTGCTCAACCAGCCAGAGGGGTGAGATGCGTAAGCCGAGGATCGGCCGAGTCACCCTC
389 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTC
* * * * ** * * * *
15933638 TACGTGCTGCCAATCTTGCTATCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTC
454 TGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTC
* * * * * * * * *
15933703 TGTATGCCTAAGCTAACCGAAGAAATGAGTGGGCGAGCAGGCGGGCACTACGCCGACAAGAGAGA
519 CGTATGCCTAAGCCAACCGACGAAACGA------GA-CGGGCGGGCACTACGTCGGCCAGAGAGG
*
15933768 CGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
577 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * * *
15933833 TAGGCCAATGCAATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
642 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
* * * * * *
15933898 TTCATGCCAAGACGACTTGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACAGTTCGAGATTT
707 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTT
15933963 TTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
772 TTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* * * *
15934028 GGCAAGCACAAAAAAAATTCACCTAAAAACGCAAAGTGTACAAGATT
837 GGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * *
15934075 TTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGTAGCAAACCTAT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
15934140 AAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGATGTGGGATAGGGGGCCAAT
66 AAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* *
15934205 ATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA--CCCCCCGCCCCCCCGATCG
130 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGCCCCCCCAATCG
* * * * *
15934268 TCGTAACCCTAATGTCG-CAGGTCAGCTTCTACGGCGATGGTGTCCC-AGCGAAGAAAAATACGG
195 TCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATACGG
* * * *
15934331 TACCAGCACATGCCCGAGCCCAACGTGTG-TAGCTGCAA-CC-C-G--C-G---G----T---CT
258 CACCAGCACATGCCCGAGCCCAGCATGTGCT-GCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
*
15934379 --G---G----TCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAATTCAACCCACGAAACG
322 GGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * *
15934433 AGCGTACAGGCGCTTAGCCGGCCATAGGGACGGGATGCGCAAGCTGGGGATC-GATCGGGTCCCC
387 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCC
* ** * * * *
15934497 CTCTGCATGCTACCAATCCTACTGCCACAACCCTCGGTCTGATTCGATCTTAGACTAGGAATGAA
451 CTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAA
* * * *
15934562 CTCCATATGCATAAGCCAACCGATGAAACGAG-CGGGCAGGAGGGTCGACACTACGTCTGCCAGA
516 CTCCGTATGCCTAAGCCAACCGACGAAACGAGACGGGC-----GG--G-CACTACGTCGGCCAGA
* * *
15934626 GAGACGGGATGTGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
573 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
15934691 CTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTG
638 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * *** * * *
15934756 AAGTTTCTTGGCAAGACGACCCGTTTAAAATTTTTCAAGATTTTTAAAACTTTTTAAGGTTCAGG
703 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGG
*
15934821 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGCATTTT
768 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
15934886 TGTTGGAAAGCATAAAAAAATTCAGCTAAAAAGTCGAAGTGTACAAGATT
833 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
15934936 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCGACTGGCAGCAAACCTGT
1 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
15935001 AAAATCTCAAATGCTCTGTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
66 AAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * *
15935066 ATAAGGGCCAAGTACCAGCACCCATCACACATCAGGTGCGCACACCCCCCCAGCCCCCCCGATCG
130 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGCCCCCCCAATCG
* * *
15935131 CCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGGTG-CCTCGGA-GAAGAAAAATACGG
195 TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCC-C-GACGAAGAAAAATACGG
* * * *
15935194 CACCAGCACATGCCCGAGCCCAGCAAGTGCTACCGAAACCCTCGGTCCGGTCCGATCTTTGACTG
258 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* *
15935259 GGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAATGA
323 GGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * *
15935324 GCATGTGGGTGCTAAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTTGGGTCCCCCT
388 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCT
* * * * *
15935389 CTGCCTGCTGTCGATCCTGCTGTCGCAACCCCCGGTCCGATCCGATCTTAGACTGGGAATGAACT
453 CTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACT
* * * * * *** *
15935454 CCGTATGCCTAAGTCAAACC-ACGAAATGAGTA--TGTGGGCGCTAAACCGGCCAGAGGGGCGGG
518 CCGTATGCCTAAG-CCAACCGACGAAACGAG-ACGGGCGGGCACTACGTCGGCCAGAGAGGCGGG
*
15935516 ATGCGCAAGCCGGGGATCG
581 ATGCGCAAGCCGTGGATCG
15935535 GTTGGGTCCC
Statistics
Matches: 7660, Mismatches: 1376, Indels: 990
0.76 0.14 0.10
Matches are distributed among these distances:
852 33 0.00
853 147 0.02
854 23 0.00
855 15 0.00
856 54 0.01
857 9 0.00
858 7 0.00
859 3 0.00
860 10 0.00
861 199 0.03
862 432 0.06
863 103 0.01
864 12 0.00
865 8 0.00
866 4 0.00
867 4 0.00
868 2 0.00
869 2 0.00
870 5 0.00
871 304 0.04
872 244 0.03
873 216 0.03
874 13 0.00
875 6 0.00
876 10 0.00
877 776 0.10
878 1057 0.14
879 569 0.07
880 328 0.04
881 13 0.00
882 50 0.01
883 6 0.00
884 6 0.00
885 14 0.00
886 4 0.00
887 363 0.05
888 548 0.07
889 82 0.01
890 618 0.08
891 288 0.04
892 68 0.01
893 101 0.01
894 16 0.00
895 8 0.00
896 17 0.00
897 11 0.00
898 6 0.00
899 8 0.00
900 3 0.00
901 3 0.00
902 2 0.00
903 6 0.00
904 4 0.00
905 8 0.00
906 12 0.00
907 15 0.00
908 5 0.00
909 8 0.00
911 1 0.00
913 6 0.00
914 17 0.00
915 10 0.00
916 11 0.00
917 5 0.00
918 2 0.00
921 4 0.00
922 2 0.00
924 2 0.00
925 2 0.00
926 3 0.00
927 5 0.00
929 2 0.00
933 1 0.00
934 2 0.00
935 2 0.00
936 1 0.00
937 3 0.00
938 7 0.00
939 5 0.00
940 1 0.00
941 5 0.00
942 21 0.00
943 3 0.00
944 7 0.00
945 10 0.00
946 28 0.00
947 9 0.00
948 6 0.00
949 11 0.00
950 8 0.00
951 3 0.00
952 1 0.00
953 6 0.00
954 6 0.00
955 2 0.00
956 6 0.00
957 6 0.00
958 4 0.00
960 6 0.00
961 30 0.00
962 12 0.00
963 29 0.00
964 9 0.00
965 1 0.00
966 4 0.00
967 4 0.00
968 8 0.00
969 2 0.00
970 1 0.00
971 7 0.00
972 4 0.00
973 4 0.00
974 6 0.00
975 9 0.00
977 7 0.00
978 7 0.00
979 1 0.00
981 1 0.00
982 10 0.00
983 12 0.00
984 17 0.00
985 12 0.00
986 10 0.00
987 27 0.00
988 7 0.00
989 2 0.00
990 9 0.00
991 5 0.00
992 5 0.00
993 8 0.00
994 18 0.00
995 8 0.00
996 10 0.00
997 5 0.00
998 9 0.00
999 16 0.00
1000 6 0.00
1001 14 0.00
1002 1 0.00
1003 5 0.00
1004 6 0.00
1005 8 0.00
1009 3 0.00
1010 8 0.00
1011 3 0.00
1012 4 0.00
1013 14 0.00
1014 3 0.00
1015 14 0.00
1016 7 0.00
1017 7 0.00
1018 11 0.00
1019 7 0.00
1020 12 0.00
1021 5 0.00
1022 6 0.00
1023 16 0.00
1024 100 0.01
1025 157 0.02
1026 72 0.01
1027 45 0.01
1028 36 0.00
1029 115 0.02
1030 47 0.01
1031 243 0.03
1032 63 0.01
1033 73 0.01
1034 33 0.00
1035 65 0.01
1036 51 0.01
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (882 bp):
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGCCCCCCCAATCGT
CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCAC
CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGA
ATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTG
CGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCG
TATGCCTAAGCCAACCGACGAAACGAGACGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCG
CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
AGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
TTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
Found at i:15931769 original size:26 final size:26
Alignment explanation
Indices: 15931740--15931789 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
15931730 GTCCGATCTG
*
15931740 AGACTGGGAATGAACTCTGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
15931766 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
15931790 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.18, G:0.28, T:0.26
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:15933530 original size:26 final size:26
Alignment explanation
Indices: 15933501--15933553 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15933491 GTCGGATCTC
* *
15933501 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTAGGAATGAAATCCGTATGCTT
*
15933527 AGACTAGGAATGAAATTCGTATGCTT
1 AGACTAGGAATGAAATCCGTATGCTT
15933553 A
1 A
15933554 AGTCAACCCG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.15, G:0.25, T:0.28
Consensus pattern (26 bp):
AGACTAGGAATGAAATCCGTATGCTT
Found at i:15937318 original size:16 final size:16
Alignment explanation
Indices: 15937294--15937356 Score: 65
Period size: 16 Copynumber: 3.9 Consensus size: 16
15937284 GGATTTTTTT
*
15937294 AGGACTTTGGATTTCA
1 AGGATTTTGGATTTCA
15937310 AGGATTTTGGATTTCA
1 AGGATTTTGGATTTCA
* * *
15937326 GGGGGTTTTCGATTT-A
1 -AGGATTTTGGATTTCA
15937342 ATGGATTTTGGATTT
1 A-GGATTTTGGATTT
15937357 TTAGGGGTTT
Statistics
Matches: 38, Mismatches: 7, Indels: 4
0.78 0.14 0.08
Matches are distributed among these distances:
16 27 0.71
17 11 0.29
ACGTcount: A:0.21, C:0.06, G:0.29, T:0.44
Consensus pattern (16 bp):
AGGATTTTGGATTTCA
Found at i:15937774 original size:16 final size:16
Alignment explanation
Indices: 15937750--15937799 Score: 55
Period size: 17 Copynumber: 3.0 Consensus size: 16
15937740 AAAAATATAT
15937750 TTAAAAATACAAAAAA
1 TTAAAAATACAAAAAA
* *
15937766 TTAATAATAATAAAAAA
1 TTAAAAAT-ACAAAAAA
*
15937783 TTAGAAAATTCAAAAAA
1 TTA-AAAATACAAAAAA
15937800 AAATTTTTTT
Statistics
Matches: 27, Mismatches: 5, Indels: 3
0.77 0.14 0.09
Matches are distributed among these distances:
16 7 0.26
17 16 0.59
18 4 0.15
ACGTcount: A:0.70, C:0.04, G:0.02, T:0.24
Consensus pattern (16 bp):
TTAAAAATACAAAAAA
Found at i:15938530 original size:17 final size:17
Alignment explanation
Indices: 15938510--15938552 Score: 59
Period size: 17 Copynumber: 2.5 Consensus size: 17
15938500 ATTTTTTTAT
15938510 TTTTTTTTCTATTTTGG
1 TTTTTTTTCTATTTTGG
* *
15938527 TTTTTTTTTTGTTTTGG
1 TTTTTTTTCTATTTTGG
15938544 TTATTTTTT
1 TT-TTTTTT
15938553 TTACGTCGAA
Statistics
Matches: 23, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
17 17 0.74
18 6 0.26
ACGTcount: A:0.05, C:0.02, G:0.12, T:0.81
Consensus pattern (17 bp):
TTTTTTTTCTATTTTGG
Found at i:15938530 original size:18 final size:17
Alignment explanation
Indices: 15938509--15938555 Score: 67
Period size: 18 Copynumber: 2.6 Consensus size: 17
15938499 TATTTTTTTA
15938509 TTTTTTTTTCTATTTTGG
1 TTTTTTTTT-TATTTTGG
*
15938527 TTTTTTTTTTGTTTTGG
1 TTTTTTTTTTATTTTGG
15938544 TTATTTTTTTTA
1 TT-TTTTTTTTA
15938556 CGTCGAAAAT
Statistics
Matches: 26, Mismatches: 2, Indels: 2
0.87 0.07 0.07
Matches are distributed among these distances:
17 9 0.35
18 17 0.65
ACGTcount: A:0.06, C:0.02, G:0.11, T:0.81
Consensus pattern (17 bp):
TTTTTTTTTTATTTTGG
Found at i:15938776 original size:12 final size:12
Alignment explanation
Indices: 15938761--15938801 Score: 55
Period size: 12 Copynumber: 3.4 Consensus size: 12
15938751 GGTCGGAGAG
15938761 TTGGTTGGGTAA
1 TTGGTTGGGTAA
* * *
15938773 TTGGTCGGGGAG
1 TTGGTTGGGTAA
15938785 TTGGTTGGGTAA
1 TTGGTTGGGTAA
15938797 TTGGT
1 TTGGT
15938802 AGGGGCAGTT
Statistics
Matches: 23, Mismatches: 6, Indels: 0
0.79 0.21 0.00
Matches are distributed among these distances:
12 23 1.00
ACGTcount: A:0.12, C:0.02, G:0.46, T:0.39
Consensus pattern (12 bp):
TTGGTTGGGTAA
Found at i:15938806 original size:24 final size:24
Alignment explanation
Indices: 15938734--15938811 Score: 111
Period size: 24 Copynumber: 3.2 Consensus size: 24
15938724 GGTAGTTGGT
* *
15938734 AGTTGGTAGAGGTAATTGGTCGGAG
1 AGTTGGTTG-GGTAATTGGTCGGGG
15938759 AGTTGGTTGGGTAATTGGTCGGGG
1 AGTTGGTTGGGTAATTGGTCGGGG
*
15938783 AGTTGGTTGGGTAATTGGTAGGGG
1 AGTTGGTTGGGTAATTGGTCGGGG
15938807 CAGTT
1 -AGTT
15938812 CGGCGTCGTA
Statistics
Matches: 49, Mismatches: 3, Indels: 2
0.91 0.06 0.04
Matches are distributed among these distances:
24 37 0.76
25 12 0.24
ACGTcount: A:0.18, C:0.04, G:0.46, T:0.32
Consensus pattern (24 bp):
AGTTGGTTGGGTAATTGGTCGGGG
Found at i:15938864 original size:8 final size:8
Alignment explanation
Indices: 15938851--15938891 Score: 55
Period size: 8 Copynumber: 4.9 Consensus size: 8
15938841 CTTATTTCTG
15938851 TTTTGTTT
1 TTTTGTTT
15938859 TTTTGTTT
1 TTTTGTTT
*
15938867 GTTGTTTTTT
1 -TT-TTGTTT
15938877 TTTTGTTT
1 TTTTGTTT
15938885 TTTTGTT
1 TTTTGTT
15938892 GTTGTTTTGT
Statistics
Matches: 29, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
8 20 0.69
9 4 0.14
10 5 0.17
ACGTcount: A:0.00, C:0.00, G:0.15, T:0.85
Consensus pattern (8 bp):
TTTTGTTT
Found at i:15938876 original size:14 final size:14
Alignment explanation
Indices: 15938857--15938899 Score: 56
Period size: 14 Copynumber: 3.3 Consensus size: 14
15938847 TCTGTTTTGT
15938857 TTTTTTGTTTGTTG
1 TTTTTTGTTTGTTG
*
15938871 TTTTTTTTTTG-T-
1 TTTTTTGTTTGTTG
15938883 TTTTTTG-TTGTTG
1 TTTTTTGTTTGTTG
15938896 TTTT
1 TTTT
15938900 GTTAAATATT
Statistics
Matches: 25, Mismatches: 2, Indels: 5
0.78 0.06 0.16
Matches are distributed among these distances:
11 3 0.12
12 7 0.28
13 5 0.20
14 10 0.40
ACGTcount: A:0.00, C:0.00, G:0.16, T:0.84
Consensus pattern (14 bp):
TTTTTTGTTTGTTG
Found at i:15938884 original size:11 final size:11
Alignment explanation
Indices: 15938851--15938902 Score: 68
Period size: 11 Copynumber: 4.6 Consensus size: 11
15938841 CTTATTTCTG
*
15938851 TTTTGTTTTTT
1 TTTTGTTGTTT
15938862 TGTTTGTTGTTT
1 T-TTTGTTGTTT
*
15938874 TTTTTTTGTTT
1 TTTTGTTGTTT
*
15938885 TTTTGTTGTTG
1 TTTTGTTGTTT
15938896 TTTTGTT
1 TTTTGTT
15938903 AAATATTATT
Statistics
Matches: 36, Mismatches: 4, Indels: 2
0.86 0.10 0.05
Matches are distributed among these distances:
11 26 0.72
12 10 0.28
ACGTcount: A:0.00, C:0.00, G:0.17, T:0.83
Consensus pattern (11 bp):
TTTTGTTGTTT
Found at i:15938884 original size:26 final size:25
Alignment explanation
Indices: 15938851--15938899 Score: 89
Period size: 26 Copynumber: 1.9 Consensus size: 25
15938841 CTTATTTCTG
15938851 TTTTGTTTTTTTGTTTGTTGTTTTTT
1 TTTTGTTTTTTTG-TTGTTGTTTTTT
15938877 TTTTGTTTTTTTGTTGTTGTTTT
1 TTTTGTTTTTTTGTTGTTGTTTT
15938900 GTTAAATATT
Statistics
Matches: 23, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 10 0.43
26 13 0.57
ACGTcount: A:0.00, C:0.00, G:0.16, T:0.84
Consensus pattern (25 bp):
TTTTGTTTTTTTGTTGTTGTTTTTT
Found at i:15942002 original size:26 final size:26
Alignment explanation
Indices: 15941973--15942025 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15941963 CTGGTCCGAT
*
15941973 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15941999 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15942025 C
1 C
15942026 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15942837 original size:890 final size:888
Alignment explanation
Indices: 15939975--15949044 Score: 11485
Period size: 890 Copynumber: 10.3 Consensus size: 888
15939965 NNNNNNNNNN
* *
15939975 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGATTTGATGAGGGATAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
15940040 GGCCAATATAAGGGCCAAGTACCAACACCCATCGCAAATCATATGCGCACA----------CCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * * *
15940095 CCGATCGCCGGAACCCCAATGCCACCGATCAGGTTTTCCGGCGATGGTGTCCCGACGAAGAAAAA
131 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAA
* * *
15940160 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACTCTCGGTCCGGTCCGATCTTA
196 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTA
* * * * * **
15940225 CACTAGGAATGAACTCTGTATGCTTAGACTGGAAATGAACTTGGTATGCCTAAGTCAACCCACGA
261 GAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * * * * * * * *
15940290 AACGAACATGCGGGTGTTCAACCGACCAGAGAGGCGAGATACGCAAGCCAGGGATCGGTCGGGTC
326 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTC
* * * * **
15940355 CCCCTCTGCCTGCTGCCGATCCTGCTATCGCAACCCTCCATTCGGTTTGATCTTAGACTGGGAAT
391 CCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGA-TCGGTCCGATCTTAGACTGGGAAT
* * * ** *
15940420 GAACTCTGTATGCTTAAGTCAACCGACGAAACGAGCGGGCAAGCGGGCGGGCACTACGTCGGCCA
455 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCA
*
15940485 GAGAGGCGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
520 GAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* * *
15940550 TTTTGCCA-TGCCAATGCCATTTTTCTGGCTTTTAAATTCATAAAATGGTCCCTTAAGCCTTCAT
585 TTCTG-CAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* * *
15940614 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTT
649 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC
* * * * *
15940679 GGGATTTTTTAAAAATTTTTCAGAAGGAGTTTTGGCCCCAAACATGGCAGACATGATCCCTGTAT
714 GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * *
15940744 TTTTTTTGGCATGCACAAAAAAATTCCGTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
779 TTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
*
15940809 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTA
843 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
**
15940855 AACCTGTAAAATCTCAAATGCTCTTTAAAAGGGTGTGAGTTCTC-ATGGTTTGATGAGGGATAGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGG
* *
15940919 GGGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCC
65 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC
* * * * ** * *
15940983 CCCAATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCTCCAACAATGGTGTCCTGGCGAAGAAAA
130 CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAA
* * *
15941048 ATACGGCACCGGCACATGCCTGAGCCCAGCATGTGCTGCCGTAA--C-C--TC-GG-CC---C--
195 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTT
*
15941101 -------G---G---TCCG-AT-CATAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
260 AGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * *
15941151 AAACGAGCGTGTGGGCGCTCAGCCGGCCAAAGAGGCGGGATGCGCAAGCTGCGGATCGGCCGGGT
325 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT
** * * *
15941216 CCCCCTCTGCGTGCTACCGATCCTATTGCCGCAACCCTC-AGTCTGGTCAGATCTTAGATTGGGA
390 CCCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGA-TC-GGTCCGATCTTAGACTGGGA
* * *
15941280 ATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGCGGGCGGACGGGCGGGCACTACGCCGGC
453 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGC
*
15941345 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATATTCAT
518 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
*
15941410 ATTTCTGCCA-TGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
583 ATTTCTG-CAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * *
15941474 ATGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCATGATTTTCAAAACTTTTTAAGGT
647 ATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGT
* * * * *
15941539 TCGGGATTTTTTAAAATTTTTTCAGAAAGA-TTTCTGTCCGCAAACTTGGTGGACATGATCCTTG
712 TCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT-TGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * * *
15941603 TATTTTTCTAGGCATGCATAAAAAAATTCAGCTAAAAAATTGAAGTGTACAAGATTTTGTGACCA
776 TATTTTTGTTGGCATGCA-CAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
15941668 TTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGCCTACTGGCAGCA
840 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
15941717 AACCTGTAAAATCTCAAATGCTCTTTAA-GAGGTGTGAGCTCCCGAGGTTTGATGAGGGATAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
15941781 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCTCGGTCAC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CGGCCCC
** * * * * *
15941846 CCTAATCGCCTGAACCCCAATGACGCCGGTCAAGTTCTTCGGCAATGGTGTCCCGGCGAAGAAAA
130 CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAA
* * * * *
15941911 ATACGGCACCAGCACATGCCCGAGCCTAGTATGTGCTGTCACAACCATCGGTCTGGTCCGATCTT
195 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTT
*
15941976 AGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
260 AGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * ** * * * *
15942041 AAATGAGAGGGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCTTAAGCCTGTGATCGGCCAGGA
325 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT
* * * * * **
15942106 CCCCCTCTGTGTGCTGCCCATCCTGCTTCCACAACCCTCGATGCGGTTTGATCTTAGACTGGGAA
390 CCCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGAT-CGGTCCGATCTTAGACTGGGAA
* * * * ** * *
15942171 CGAACTTCGTATGCCTAAGCCAATCGACGAAACGAGCGAGCGGGCGGGCCAGCACTACGTCGGCT
454 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCC
* *
15942236 AGAGAGGCGGGATGCACAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
519 AGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* * * * *
15942301 TTTCTGAAATGCCAATGCCATTTTTCTAGCTTTTAAATTCATACAATAGTCCCTTAAGCCTTCAT
584 TTTCTGCAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* *
15942366 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTAAAACTTTTTACGGTTT
649 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC
* * *
15942431 GGGATTTTTTAAAATCTTTTCAGAAGGAGTTTTCGCCCCAAACTTGGTAGACCTGATCCTTGTAT
714 GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
15942496 TTTTGTCGGCATGCACAAATAAAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
779 TTTTGTTGGCATGCACAAA-AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
15942561 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
843 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
15942607 AACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
15942672 GGCCAATATAAGGGCCAAGCACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGCCCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * * * * ** * *
15942737 TCGATCGTCGGAACCCCAATGCCACCAGTCTGGAACTCCGACGATGGTGTCCCGACGAAGAAAAA
131 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAA
* * * * * * *
15942802 TGCGGCACCAGCACATGCTCAAGCCCGGCATGTGCTGTCGTAA---T-GCTC-GGT-C---C---
196 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTA
* * *
15942855 -----GG--T---CT--G-AT-CTTAGACTAGGAATGAACTCCATATGCCTAAGTCAATCCACGA
261 GAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * * **
15942906 AACGAACGTGCGGGCGTTCAGCCGGCCAGAGGGGCTGGATGTGCAAGCCGGGGATCAGATGGGTC
326 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTC
*
15942971 CCCCATCT---TGCT----A-CC-G-T-----AACCCTCGATCTGGTCCGATCTTAAACTGGGAA
391 CCCC-TCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGATC-GGTCCGATCTTAGACTGGGAA
* * * * * * * **
15943021 TGAACTCTGTATGCCTAAGCCAAACGACGAAACGAGCGCGTGGACGGGCGAGCACTACGTCACCC
454 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCC
*
15943086 AGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
519 AGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* * * * *
15943151 TTTTTGCCAGTTCCAATGCCATTTTTCTGGGTTGTAAATTCATACAATTGTCACTTAAGCCTTCA
584 TTTCTG-CAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * *
15943216 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTATTACGATT
648 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTT
*** * * * *
15943281 CATAATTTTTTTAAATTTTTTCAGAAGGATTTTTGGCCCCAAACGTGGTAGACGTGATCCTTATA
713 CGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* * * *
15943346 TTTTTTTTGGCATGTACAAAAAAGTTCAGCTAAAAACTCAAAGTGTACAAGATTTTTTGACCATT
778 TTTTTGTTGGCATGCACAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
15943411 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
842 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
15943458 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGTTCTCGAGGTTTGATGAGGGACAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * * *
15943523 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCATATCATGTGCACGCACCCCTCCGACCCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * * * * * *
15943588 CTGATGGCCGGTACCCCAATGCTGCCGGTCAGGTTCTCTGGCGATGGTGTCTCGGTGAAGAAAAA
131 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAA
* * *
15943653 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCT-GTCTGATCTT
196 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGGTCCGATCTT
* * * * *
15943717 ATAATGGGAATGAACTCCATATGCTTAGACTGGAAATGAACTCTGTATGCCTAAGTCAACCCCCG
260 AGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * * * *
15943782 AAACGAGCGTACGGGTGCTCAGCAGGCTAGAGGGGCGGGATACGCAAGCCGGGGATCGACTGGGT
325 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT
* * * * * * * * *
15943847 CCCCTTCTACTTGCTATCGATCCTGCTACCGGAACCCTGGGTCCGGTTCGATTTTAGACTGGGAA
390 CCCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGAT-CGGTCCGATCTTAGACTGGGAA
* * *
15943912 TGAACTACGTATGCCTAAGCCAACCGACGAAACGAGCGGGGCGGGTGGGAGGGCACTACGCCGGC
454 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGGCGGGCGGGCGGGCACTACGCCGGC
* * * * *
15943977 CAGAGAGACGAGATGCGCAAGCCGTGGATCAATAAGGTGGAAGGTGGGTTTAGGCACATCTTCAT
518 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * * * *
15944042 ATTTTTGCCGTGCCAATGCCA-TTTTCTGCCTTGTAAATTCATACAATGGTCCCTTATGCCTTCT
583 ATTTCTGCAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * *
15944106 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATGTTCAAAA-TTTTTAAGGTT
648 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTT
* * * *
15944170 CAGGATTTTTTAAAATTTTTTCAGAAGGATTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGAA
713 CGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* *
15944235 TTCTTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
778 TTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
*
15944300 TGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
842 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
15944347 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
*
15944412 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCC-GCCCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * **
15944476 CCGATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGACGATGGTGTCCCAACGAAGAAAAA
131 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAA
* * *
15944541 TACGGCACCAGCACATGCCTGAGCCTAGCATGTGCTGTCGCAA-CC-C--TC-GGT-C---C---
196 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTA
*
15944594 ------G---G--C-CCG-AT-CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGA
261 GAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * ** *
15944645 AACGAGCGTGCGGGCGCTCAACTGGCCATAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGAC
326 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTC
* * * * * * *
15944710 CCCCTCTGCGTTCTATCGATCCTGCTACCGTAACCCTCGGTCTGGTCTGATCTTTGACTAGGAAT
391 CCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGATC-GGTCCGATCTTAGACTGGGAAT
* * * * **
15944775 GAACTCCGTATGCCTAAGCCAAACGACGAAACGAGCGTGCAGGCAGGCGGGCACTACGCCGGTAA
455 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCA
* * *
15944840 GAGAGGCGAGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATAT
520 GAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* *
15944905 TTCTAGCAGTGCCAATGCCATTTTTCTGGGTTGTAAATTCATACAATGGTCACTTAAGCCTTCAT
585 TTCT-GCAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* * *
15944970 GTGAAGTTTCATGGCAACATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC
649 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC
* *
15945035 GGGATTTTTAAAAATTTTTTCA-AA-GA-TTTTGG-CCCAAACCT-GTA-ACGTTGAATCCTTGT
714 GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG-TG-ATCCTTGT
* *
15945094 ATTTTT-TTGGCA-GCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA-AAGATTTTTTGACCAT
777 ATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
* *
15945156 TTG-AAAAAGTATCCCC-TTTCAGACACTTTAGT-G-TACTGGCAGCA
841 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * *
15945200 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGATTTCTCAAGATTTAATGAGGGATAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
15945265 GGCCAGTATAAGGG-CAAGTACTAGCACCCATCACACATCATGTGCATGCAC-CCGCCCCGGCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC--GCACACCCCCCCGGCCC
* * ** * * * * *
15945328 CCCTGATTGTTGGTAA-CCCAATGCTGTCGGTCAGGTTCTCCGGTGATGGTGTCTCGGTGAAGAA
129 CCCCGATCGCCGG-AACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAA
* * * * * *
15945392 AAATGCGGCACCAGCACATGTCGGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTAGTCTGATC
193 AAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATC
* * *
15945457 TTATAATGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCA
258 TTAGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * ** *
15945522 CGAAACAAGCGTGCGGGCGCTCAACCGGTCGGAGGGGCGGGATGCGCAAGCCAAGGATCGGTCGG
323 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGG
* ** * * * * *
15945587 GTCCCCCTCTGCATGCTGTCGATCCTGTTACCGCAACCCTGGGTCCGGTCTGAACTTAGACTGGG
388 GTCCCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGAT-CGGTCCGATCTTAGACTGGG
* * * * *
15945652 AATGAACTACGTCTGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGGGCAGTACGCCGA
452 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGG
* * * *
15945717 CCAGAGAGACGAGATGCGCAAGCTGTGGATCGATAGGGTGGAAGGTGGGTTTAGGCACATCTTCA
517 CCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* *
15945782 TATTTCTACCA-TGCCAATGCCA-TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTATGCCTT
582 TATTTCT-GCAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * * * *
15945845 CACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTACGATTTTCAAAA-TTTTTAAGG
646 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
* * * *
15945909 TTTGAGATTTTTTTAAATTTTTTCAGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTG
711 TTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
15945974 TATTCTTGTTGGTATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
776 TATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
15946039 TTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTAGCAGCA
840 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
15946088 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAATTCTCGAGGTTTGATGAGGGATAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
15946153 GGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACAGCCCCCCGGCCCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCC
* * * *
15946218 CCCGATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGACGATGGTGTCCCGACAAAGAAAA
130 CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAA
* * * ** * * *
15946283 ATACGACACCAGTAGATGATCGAGCCCAGCATGTGCTGCCGTAACCCTCGATCCGGTCCGATCTT
195 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTT
* * *
15946348 AGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATTAACTCCGTATGCCTAAGTCAACCCACG
260 AGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * *
15946413 AAACGAACGTGCGGGCGCTCAGTCGGCTAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCTGGGT
325 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT
* * * * * ** **
15946478 -CCCCTCTGTGTGCTCCCGATCCTGCTGCCACAACCCTCAATCCATTCTAATCTTAGACTGGGAA
390 CCCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGAT-CGGTCCGATCTTAGACTGGGAA
* ** *
15946542 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGAAGGGCGGGCGGGCACTACGCCGACC
454 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCC
* * * *
15946607 AGAGAGGCAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCAGATCTTCATA
519 AGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* *
15946672 TTTCTGCTAGTTCCAATGCCATTTTTCTGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
584 TTTCTGC-AGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * * *
15946737 TGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGCTTTTTGAAACTTTTTAGGGTT
648 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTT
** ** *
15946802 TAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTTACCCCAAACTTGGTACACGTGATCCTTGTA
713 CGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
*
15946867 TTTTTGTTGGCATGCACAAAAAACTTCAGCTAAAAACTCGAAGTGGACAAGATTTTGTGACCATT
778 TTTTTGTTGGCATGCACAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
*
15946932 TGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
842 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
15946979 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAATTCTCGAGGTTTGATGAGGGATAGGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
*
15947044 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCCGGCCCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * * * *
15947109 CCGATCGCCGGAACCCTAATGCCGCTGGTCAGGTTCTCCGACGATGGTGTCTCGACGAAGAAAAA
131 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAA
** * * * *
15947174 TGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACACTCGGTCCGATCCGATCTTA
196 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTA
* * * * * *
15947239 GACTGCGAATGAAGTCCGCATGCTTAGACTAGGAATGAACTCCGTATGCGTAAGTCAACCCACGA
261 GAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * ** * * *
15947304 AATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCATAAGCTGAGGATCGGTCGGGTC
326 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTC
* * * * *
15947369 CCTCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTTGGTCCAGTCCAATCTTAGACTGGGAAT
391 CCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGAT-CGGTCCGATCTTAGACTGGGAAT
* * * * * *
15947434 GAAATCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGTGGGTGGGCACTACGTCGACCA
455 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCA
* * * *
15947499 AAGAGGCAGGATGCGTAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
520 GAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*
15947564 TTCTGCCAGTGCCAATGCCATTTTTCTGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
585 TTCTG-CAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* * *
15947629 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTTAGACTTTTTACGGTTC
649 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC
* * * ** * *
15947694 GAGATTTTTTTAAATTTTTTCAGATGGAG-TTTGGTGCCAAACTTGGTAAATGTGATCCTTGTAT
714 GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * * *
15947758 TTTTATTGGCATGCACAAAAACATTCAGCTAAAAAGTCAAAGTGTACAAGATTTTTTGACCATTT
779 TTTTGTTGGCATGCACAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
*
15947823 GAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCA
843 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * *
15947869 AACCTGTAAAATCTTAAATGCTCTTTAAGGGGATGTGAGTTCTCGAGGTTTCATGAGGGATAAGG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* ** ** *
15947934 GGCCAATATAAGGGCCAAATACCAGCACCCATCGCACATCATGTGTACGTA-CCCCCCGGGCCCC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * * * * * * *
15947998 CTGATCACCGGTACCCCAATGCCGCCAGTCAGGTTCTCTGGTGATGGTGTCCCGGTGAAAAAAAA
131 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAA
* * * * *
15948063 TGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCGGCCGTAACCCTTC-GTCTGGCCCGATCTT
196 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC-TCGGTCTGGTCCGATCTT
* * *
15948127 ATAATGGGAATGAACTCCGTATGCTTAGATTAGGAATGAACTCCGTATGCCTAAGTCAACCCACG
260 AGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * *
15948192 AAACGAGCTTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCATGCCGGGGATCGACCGAGT
325 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT
** * * * *
15948257 CCCCCTCTGTATGCTACCGATCTTGCTGCCACAACCCTCGATCTGGTCCGATCTTAGATTGGGAA
390 CCCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGATC-GGTCCGATCTTAGACTGGGAA
* *
15948322 TGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGTGGGGCGGGCGGGCGGGCA-TGATGC
454 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC----GGGCGGGCGGGCGGGCACT-ACGC
* * *
15948386 CGGCTAGAGAGGCGGGATGCGCAACCCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
514 CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* * * *
15948451 TCTTATTTCTGCCA-TGCCAATGCCATTTTTTTGGCTTCTAAATTCATACAATGGTCCTTTAAGC
579 TCATATTTCTG-CAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* *
15948515 CTTCATGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
643 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTA
* * *
15948580 GGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGGGATCC
708 CGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* *
15948645 TTGTGTTTTTGTTTGCATGCACAAAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
773 TTGTATTTTTGTTGGCATGCACAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * *
15948710 CCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCCACTGGCAGCA
837 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
15948762 AACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAGAG
1 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* ** * * * *
15948826 GGCCAATATAAGGGCAAAGTGGCAGAACCCATCACACATCATGTGGGCACACCCCCCCTGCCACC
66 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC-CC
* * * *
15948891 CCCGATCGTCGGAATCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGTCCCGGTGAAGAAAA
130 CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAA
* * * * *
15948956 ATACGGCACCAGCACATGCCCGAGCCAAGCATGTGCTACCACAGCCCTCAGT-TCGGTCCGATCT
195 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GGTCCGATCT
*
15949020 TAGACTGGGAATGAACTCCGTATGC
259 TAGAATGGGAATGAACTCCGTATGC
15949045 CTAAGCCAAT
Statistics
Matches: 7108, Mismatches: 908, Indels: 334
0.85 0.11 0.04
Matches are distributed among these distances:
849 1 0.00
850 152 0.02
851 473 0.07
852 29 0.00
853 89 0.01
854 98 0.01
855 22 0.00
856 16 0.00
857 20 0.00
858 38 0.01
859 13 0.00
860 21 0.00
861 174 0.02
862 765 0.11
863 188 0.03
864 128 0.02
865 6 0.00
866 2 0.00
867 2 0.00
868 6 0.00
869 2 0.00
870 5 0.00
871 1 0.00
872 1 0.00
873 5 0.00
875 1 0.00
876 5 0.00
877 123 0.02
878 91 0.01
879 22 0.00
880 383 0.05
881 23 0.00
882 13 0.00
883 42 0.01
884 24 0.00
885 16 0.00
886 21 0.00
887 10 0.00
888 365 0.05
889 956 0.13
890 1298 0.18
891 776 0.11
892 296 0.04
893 254 0.04
894 132 0.02
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAA
TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTA
GAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTC
CCCCTCTGCGTGCTACCGATCCTGCTACCGCAACCCTCGATCGGTCCGATCTTAGACTGGGAATG
AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAG
AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
TCTGCAGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGG
GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
TTGTTGGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
Found at i:15946381 original size:26 final size:26
Alignment explanation
Indices: 15946345--15946397 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15946335 CCGGTCCGAT
*
15946345 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15946371 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15946397 C
1 C
15946398 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15947031 original size:891 final size:888
Alignment explanation
Indices: 15942863--15949044 Score: 8012
Period size: 889 Copynumber: 7.0 Consensus size: 888
15942853 CCGGTCTGAT
* * * *
15942863 CTTAGACTAGGAATGAACTCCATATGCCTAAGTCAATCCACGAAACGAACGTGCGGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGC
* * * *
15942928 CGGCCAGAGGGGCTGGATGTGCAAGCCGGGGATCAGATGGG-----TC--C---C--CC-ATCTT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GCTGGGTCCCCTCTGCGTGCTACCGATCCT
* * * * * * *
15942980 GCTACCGTAACCCTCGATCTGGTCCGATCTTAAACTGGGAATGAACTCTGTATGCCTAAGCCAAA
130 GCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * ** *
15943045 CGACGAAACGAGCGCGTGGACGGGCGAGCACTACGTCACCCAGAGAGGCGGGATGCGCAAGCCAT
195 CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* *
15943110 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCAGTTCCAATGCCATTT
260 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATGCCATTT
* * *
15943175 TTCTGGGTTGTAAATTCATACAATTGTCACTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * ** *
15943240 TCGTTTTCTATTTTTCATGATTTTTGAAACTTATTACGATTCATAATTTTTTTAAATTTTTTCAG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAG
* * * *
15943305 AAGGA-TTTTTGGCCCCAAACGTGGTAGACGTGATCCTTATATTTTTTTTGGCATGTACAAAAAA
455 AAGGAGTTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
15943369 GTTCAGCTAAAAACTCAAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
15943434 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
15943499 CTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCATATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * * *
15943564 TGTGCACGCACCCCTCCGACCCCCCTGATGGCCGGTACCCCAATGCTGCCGGTCAGGTTCTCTGG
714 TGTGCGCACACCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* ** *
15943629 CGATGGTGTCTCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGT
778 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT
* * * * *
15943694 AACCCTCGGTCCTGTCTGATCTTATAATGGGAATGAACTCCATATG
843 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
15943740 CTTAGACTGGAAATGAACTCTGTATGCCTAAGTCAACCCCCGAAACGAGCGTACGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGC
* * * * * *
15943805 AGGCTAGAGGGGCGGGATACGCAAGCCGGGGATCGACTGGGTCCCCTTCTACTTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG-CTGGGTCCCC-TCTGCGTGCTACCGATCC
* * * *
15943870 TGCTACCGGAACCCTGGGTCCGGT-TCGATTTTAGACTGGGAATGAACTACGTATGCCTAAGCCA
129 TGCTACCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
15943934 ACCGACGAAACGAGCGGGGCGGGTGGGAGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGC
193 ACCGACGAAACGAGC-GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * * *
15943999 CGTGGATCAATAAGGTGGAAGGTGGGTTTAGGCACATCTTCATATTTTTGCC-GTGCCAATGCCA
257 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATGCCA
* * *
15944063 -TTTTCTGCCTTGTAAATTCATACAATGGTCCCTTATGCCTTCTTGTGAAGTTTCATGGCAAGAC
322 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * * * *
15944127 GACTCGTTTTCTATTTTTCACGA-TGTTCAAAATTTTTAAGGTTCAGGATTTTTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTT
* * *
15944191 CAGAAGGATTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGAATTCTTGTTGGCATGCACAAAA
452 CAGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
15944256 AAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15944321 AGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
15944386 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
*
15944451 CATGTGCGCACAGCCCCCC-GCCCCCCCGATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTCC
712 CATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * *
15944515 GACGATGGTGTCCCAACGAAGAAAAATACGGCACCAGCACATGCCTGAGCCTAGCATGTGCTGTC
776 GGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
*
15944580 GCAA-CC-C--T-C-G---G-TC-----C---G---G--C-CCG-AT-
841 GTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
15944602 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGC
* * * * * *
15944667 TGGCCATAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGACCCCCTCTGCGTTCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGCT-GGG-TCCCCTCTGCGTGCTACCGATCC
* * * *
15944732 TGCTACCGTAACCCTCGGTCTGGTCTGATCTTTGACTAGGAATGAACTCCGTATGCCTAAGCCAA
129 TGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * ** * *
15944797 ACGACGAAACGAGCGTGCAGGCAGGCGGGCACTACGCCGGTAAGAGAGGCGAGATGCGCAAGTCG
194 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
15944862 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTAG-CAGTGCCAATGCCAT
259 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCCAGTGCCAATGCCAT
* * * *
15944926 TTTTCTGGGTTGTAAATTCATACAATGGTCACTTAAGCCTTCATGTGAAGTTTCATGGCAACATG
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* *
15944991 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTAAAAATTTTTTC
388 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTC
* *
15945056 A-AA-GA--TTTTGGCCCAAACCT-GTA-ACGTTGAATCCTTGTATTTTT-TTGGCA-GCACAAA
453 AGAAGGAGTTTTTGCCCCAAACTTGGTAGACG-TG-ATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
15945113 AAAATTCAGCTAAAAACTCAAAGTGTA-AAGATTTTTTGACCATTTG-AAAAAGTATCCCC-TTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
15945175 CAGACACTTTAGT-G-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * * * *
15945238 TTTCTCAAGATTTAATGAGGGATAGGGGGCCAGTATAAGGG-CAAGTACTAGCACCCATCACACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * ** * *
15945302 TCATGTGCATGCAC-CCGCCCCGGCCCCCCTGATTGTTGGTAA-CCCAATGCTGTCGGTCAGGTT
711 TCATGTGC--GCACACC-CCCCGGCCCCCCCGATCGCCGG-AACCCCAATGCCGCCGGTCAGGTT
* * ** * * *
15945365 CTCCGGTGATGGTGTCTCGGTGAAGAAAAATGCGGCACCAGCACATGTCGGAGCCCAGCATGTGC
772 CTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
** * * * *
15945430 TGCCGTAACCCTCGGTCTAGTCTGATCTTATAATGGGAATGAACTCCATATG
837 TGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15945482 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAAC-AAGCGTGCGGGCGCTCAA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAA-CGTGCGGGCGCTCAG
* * ** * * **
15945546 CCGGTCGGAGGGGCGGGATGCGCAAGCCAAGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGCT-GGGT-CCCCTCTGCGTGCTACCGATC
* * * * *
15945611 CTGTTACCGCAACCCTGGGTCCGGTCTGAACTTAGACTGGGAATGAACTACGTCTGCCTAAGCCA
128 CTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
15945676 ACCGACGAAACGAGCGGGCGGACGGGCGGGCAGTACGCCGACCAGAGAGACGAGATGCGCAAGCT
193 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
15945741 GTGGATCGATAGGGTGGAAGGTGGGTTTAGGCACATCTTCATATTTCTACCA-TGCCAATGCCA-
258 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATGCCAT
* * *
15945804 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTATGCCTTCACGTGAAGTTTCATGGCAAGATG
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * * * * *
15945869 ACTCGTTTTCTATTTTTTACGA-TTTTCAAAATTTTTAAGGTT-TGAGATTTTTTTAAATTTTTT
388 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTT
* * *
15945932 CAGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTCTTGTTGGTATGCACAAAA
452 CAGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
15945997 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15946062 AGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAA
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15946127 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
*
15946192 CATGTGCGCACAGCCCCCCGGCCCCCCCCGATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTC
712 CATGTGCGCACA-CCCCCCGG-CCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * **
15946257 CGACGATGGTGTCCCGACAAAGAAAAATACGACACCAGTAGATGATCGAGCCCAGCATGTGCTGC
775 CGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* *
15946322 CGTAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATG
840 CGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
15946371 CTTAGACTGGGAATTAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGC
* * *
15946436 CGGCTAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCTGGGTCCCCTCTGTGTGCTCCCGATCCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GCTGGGTCCCCTCTGCGTGCTACCGATCCT
* * ** ** *
15946501 GCTGCCACAACCCTCAATCCATTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
130 GCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* ** * * *
15946566 CGACGAAACGAGCAGAAGGGCGGGCGGGCACTACGCCGACCAGAGAGGCAGGATGCACAAGCCGT
195 CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* * * *
15946631 GGATCGATAGGGTGGTAGGTTGGTTTAGGCAGATCTTCATATTTCTGCTAGTTCCAATGCCATTT
260 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATGCCATTT
*
15946696 TTCTGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * * *
15946761 TCGTTTTTTATTTTTCACGCTTTTTGAAACTTTTTAGGGTTTAGGATTTTTTAAAATTTTTTCAG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAG
* * *
15946826 AAGGAGTTTTTACCCCAAACTTGGTACACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAC
455 AAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
15946891 TTCAGCTAAAAACTCGAAGTGGACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
15946956 CACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAATTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
15947021 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
15947086 GTGCGCACAGCCCCCCGGCCCCCCCGATCGCCGGAACCCTAATGCCGCTGGTCAGGTTCTCCGAC
715 GTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* ** **
15947151 GATGGTGTCTCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACA
779 GATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTA
* * * * *
15947216 ACACTCGGTCCGATCCGATCTTAGACTGCGAATGAAGTCCGCATG
844 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
15947261 CTTAGACTAGGAATGAACTCCGTATGCGTAAGTCAACCCACGAAATGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGC
** * * *
15947326 CGGCCAGAGGGGCGGGATGCATAAGCTGAGGATCGGTCGGGTCCCTCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGCT-GGGTCCC-CTCTGCGTGCTACCGATCC
* * ** *
15947391 TGCTACCGCAACCCTTGGTCCAGTCCAATCTTAGACTGGGAATGAAATCCGTATGCCTAAGCCAA
129 TGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * * *
15947456 CCGACGAAACAAGCGGGCGGGTGGGTGGGCACTACGTCGACCAAAGAGGCAGGATGCGTAAGCTG
194 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
15947521 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATGCCATT
259 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATGCCATT
*
15947586 TTTCTGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
324 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
15947651 CTCGTTTTCTATTTTTCACGATTTTTTAGACTTTTTACGGTTC-GAGATTTTTTTAAATTTTTTC
389 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTC
* * * * *
15947715 AGATGGAGTTTGGTG--CCAAACTTGGTAAATGTGATCCTTGTATTTTTATTGGCATGCACAAAA
453 AGAAGGAGTTT-TTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * * *
15947778 ACATTCAGCTAAAAAGTCAAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTT
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15947843 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGATGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
15947908 TTCTCGAGGTTTCATGAGGGATAAGGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
** ** * * * * * *
15947973 CATGTGTACGTACCCCCCGGGCCCCCTGATCACCGGTACCCCAATGCCGCCAGTCAGGTTCTCTG
712 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** * * * *
15948038 GTGATGGTGTCCCGGTGAAAAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCGGCCG
777 GCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
15948103 TAACCCTTC-GTCTGGCCCGATCTTATAATGGGAATGAACTCCGTATG
842 TAACCC-TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
15948150 CTTAGATTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCTTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGC
* * * ** *
15948215 CGGCCAGAGGGGCGGGATGCGCATGCCGGGGATCGACCGAGTCCCCCTCTGTATGCTACCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG-CTGGGT-CCCCTCTGCGTGCTACCGATCC
* * * * * *
15948280 TGCTGCCACAACCCTCGATCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
129 TGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
15948345 CCGACGAAACAAGCGGTGGGGCGGGCGGGCGGGCA-TGATGCCGGCTAGAGAGGCGGGATGCGCA
194 CCGACGAAACGAGC----GGGCGGGCGGGCGGGCACT-ACGCCGGCCAGAGAGGCGGGATGCGCA
* * *
15948409 ACCCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTCTGCCA-TGCCAATG
254 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATG
* * * *
15948473 CCATTTTTTTGGCTTCTAAATTCATACAATGGTCCTTTAAGCCTTCATGTCAAGTTTCATGGCAA
319 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
** *
15948538 GACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTAGGGTTCAGGATTTTTTAAAATTT
384 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTT
* * * *
15948603 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGGGATCCTTGTGTTTTTGTTTGCATGCACA
449 TTTCAGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
15948668 AAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
15948733 TTCAGACACTTTAAGGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * ** * *
15948797 GAGTTCCCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCAAAGTGGCAGAACCCATCACA
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
15948862 CATCATGTGGGCACACCCCCCCTGCCACCCCCGATCGTCGGAATCCCAATGCCGCCGGTCAGGTT
709 CATCATGTGCGCACA-CCCCCCGGCC-CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* ** *
15948927 CTCCGGTGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCAAGCATGTGC
772 CTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* ** * * *
15948992 TACCACAGCCCTCAGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
837 TGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
15949044 C
1 C
15949045 CTAAGCCAAT
Statistics
Matches: 4629, Mismatches: 571, Indels: 193
0.86 0.11 0.04
Matches are distributed among these distances:
852 31 0.01
853 88 0.02
854 97 0.02
855 19 0.00
856 12 0.00
857 18 0.00
858 36 0.01
859 11 0.00
860 26 0.01
861 86 0.02
862 191 0.04
863 89 0.02
864 41 0.01
865 1 0.00
867 1 0.00
870 1 0.00
872 1 0.00
875 1 0.00
876 2 0.00
877 124 0.03
878 86 0.02
879 17 0.00
880 269 0.06
881 25 0.01
882 11 0.00
883 39 0.01
884 19 0.00
885 12 0.00
886 16 0.00
887 7 0.00
888 361 0.08
889 857 0.19
890 645 0.14
891 708 0.15
892 300 0.06
893 249 0.05
894 132 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGCTGGGTCCCCTCTGCGTGCTACCGATCCTG
CTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAGTGCCAATGCCATTTT
TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGA
AGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA
TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAC
CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:15947265 original size:26 final size:26
Alignment explanation
Indices: 15947235--15947287 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
15947225 CCGATCCGAT
*
15947235 CTTAGACT-GCGAATGAAGTCCGCATG
1 CTTAGACTAG-GAATGAACTCCGCATG
*
15947261 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGCATG
15947287 C
1 C
15947288 GTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGCATG
Found at i:15949306 original size:25 final size:26
Alignment explanation
Indices: 15949265--15949321 Score: 114
Period size: 26 Copynumber: 2.2 Consensus size: 26
15949255 TATTTTTCAC
15949265 GATTTTTAAAACTTTTTACGGTTCGA
1 GATTTTTAAAACTTTTTACGGTTCGA
15949291 GATTTTTAAAACTTTTTACGGTTCGA
1 GATTTTTAAAACTTTTTACGGTTCGA
15949317 GATTT
1 GATTT
15949322 CAGATGGATT
Statistics
Matches: 31, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 31 1.00
ACGTcount: A:0.26, C:0.11, G:0.16, T:0.47
Consensus pattern (26 bp):
GATTTTTAAAACTTTTTACGGTTCGA
Found at i:15950258 original size:707 final size:703
Alignment explanation
Indices: 15948288--15950461 Score: 3131
Period size: 707 Copynumber: 3.1 Consensus size: 703
15948278 CTTGCTGCCA
* * *
15948288 CAACCCTCGATCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
1 CAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAA
* * * * *
15948353 ACAAGCGGTGGGGCGGGCGGGCGGGCA-TGATGCCGGCTAGAGAGGCGGGATGCGCAACCCGTGT
66 AC--G-GGT-GGGCGGGCGGGCGGGCACT-ACGCCGGCCAGAGAGGCAGGATGCGCAACTCGTGG
* *
15948417 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTCTGCCATGCCAATGCCATTTTTT
126 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
* *
15948482 TGGCTTCTAAATTCATACAATGGT-CCTTTAAGCCTTCATGTCAAGTTTCATGGCAAGACGACTC
191 TGGCTTGTAAATTCATACAATGGTCCCTTT-AGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * *
15948546 GTTTTCTATTTTTCATGATTTTCAAAACTTTTTAGGGTTCAGGATTTTTTAAAATTTTTTCAGAA
255 GTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAT
* * * *
15948611 GGAGTTTTGGCCCCAAACTTGGTAGACGGGATCCTTGTGTTTTTGTTTGCATGCACAAAAAACTT
320 GGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAC-T
*
15948676 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAGACA
384 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
15948741 CTTTAAGGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCCCG
449 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAGGGGGTGTGAGTTCTCG
* **
15948806 AGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCAAAGTGGCAGAACCCATCACACATCATGTG
514 AGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGAACCCATCACACATCATGTG
* * * * **
15948871 GGCACACCCCCCCTGCCACCCCCGATCGTCGGAATCCCAATGCCGCCGGTCAGGTTCTCCGGTGA
579 CGCACA-CCCCCCGGCCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
** * *
15948936 TGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCAAGCATGTGCTACCA
643 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
* * *
15948997 CAGCCCTC-AGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATTGACGA
1 CAACCCTCGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGA
* * * * * * * *
15949061 CACGGGCGGGTGGGTGGACGAGCACTACGCCGACCAGAGAGGCAGGATGCGCAA-TCCATGGATC
65 AACGGGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCAGGATGCGCAACT-CGTGGATC
*
15949125 GATAGGGTGGTAGGTGGGTTT-GGCAC-TCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAG
129 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* *
15949188 CTTGTAAATTCATACAAGGGTCCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTT
194 CTTGTAAATTCATACAATGGTCCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
*
15949253 TCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGA-TTTTTAAAACTTTTTACGGTTCGA
259 TCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAA--TTTT----TTC-A
* * *
15949317 GATTTCAGATGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGACATGCG
317 GA--T-GGA--G-TTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
15949382 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCC
375 C-AAAAAACTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* *
15949447 ATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTCTAAAATCTCAAATGCTCTTTAAGGGGGT
439 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AGGGGGT
* * *
15949512 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCACGTACCAGCACCCATCA
503 GTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGAACCCATCA
* * *
15949577 CACATCATGTGCGCACAGCCCCCCGGCCCCCCCCCGATCGCCGGAACCCCAATGCTGCTGGTCAG
568 CACATCATGTGCGCACA-CCCCCCGG-CCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
* * * *
15949642 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGTAGATGACCGAGCCCAGCATG
631 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
15949707 TGCTACCG
696 TGCTACCG
* **
15949715 CAACCCTCGATCCTGTCCGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACTGACGAA
1 CAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAA
* * *
15949780 ACGGGTGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCCGGATGCGCAACTCGTGGATAGA
66 ACGGGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCAGGATGCGCAACTCGTGGATCGA
*
15949845 TAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
131 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
*
15949910 TGTAAATTCATACAATGGTCCCTTTAGCCTTCATGTGAAGTTCCATGGCAAGACGACTCGTTTTC
196 TGTAAATTCATACAATGGTCCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
15949975 TATTTTTCACGATTTTTGAAACTTTTTACAGTTCGGGATTTTTTAAAATTTTTTCAGATGGAGTT
261 TATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGATGGAGTT
* *
15950040 TTTGCCCTAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAGAAAACTCAGCTA
326 TTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA-AAAACTCAGCTA
*
15950105 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAA
390 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
15950170 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAGGGGGGTGTGAGTTCTCGAGGTT
455 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA-GGGGGTGTGAGTTCTCGAGGTT
* * * * * *
15950235 TGATGAGGGATAGACGACCAATATAAGGGCCAAGTACCAGTACCCATCGCATATCATGTGCGAAC
519 TGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGAACCCATCACACATCATGTGCGCAC
* * *
15950300 ACCGCCCCGG-CCCCCCTGATCGTCGGAACCCCAATGCCGCCAGTCGGGTTCTCCGACGATGGTG
584 ACC-CCCCGGCCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTG
* * *
15950364 TCCCGACGAAGAAGAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCG
648 TCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
* *
15950420 CAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
1 CAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCC
15950462 ATATTTTTAG
Statistics
Matches: 1303, Mismatches: 133, Indels: 62
0.87 0.09 0.04
Matches are distributed among these distances:
702 9 0.01
703 124 0.10
704 14 0.01
705 198 0.15
706 8 0.01
707 243 0.19
708 9 0.01
709 62 0.05
711 2 0.00
712 3 0.00
714 4 0.00
715 7 0.01
716 149 0.11
717 93 0.07
718 224 0.17
719 10 0.01
720 135 0.10
721 9 0.01
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.27
Consensus pattern (703 bp):
CAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAA
ACGGGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCAGGATGCGCAACTCGTGGATCGA
TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
TGTAAATTCATACAATGGTCCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
TATTTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGATGGAGTT
TTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAACTCAGCTAA
AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAGGGGGTGTGAGTTCTCGAGGTTTG
ATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGAACCCATCACACATCATGTGCGCACAC
CCCCCGGCCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCC
CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
Done.