Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168159.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_4, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33012953
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Warning! 65000 characters in sequence are not A, C, G, or T
File 82 of 160
Found at i:15951377 original size:26 final size:26
Alignment explanation
Indices: 15951338--15951390 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15951328 CTAGTCCGAT
* * *
15951338 CTTAGACTGGGAATGAATTTCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
15951364 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
15951390 C
1 C
15951391 CTAAGTTAGC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:15952263 original size:26 final size:25
Alignment explanation
Indices: 15952227--15952276 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 25
15952217 CCAGTCCGAT
15952227 CTTAGACTGGG-ATCGAAACTCGTATG
1 CTTAGACTGGGAAT-G-AACTCGTATG
15952253 CTTAGACTGGGAATGAACTCGTAT
1 CTTAGACTGGGAATGAACTCGTAT
15952277 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
25 9 0.39
26 12 0.52
27 2 0.09
ACGTcount: A:0.28, C:0.18, G:0.26, T:0.28
Consensus pattern (25 bp):
CTTAGACTGGGAATGAACTCGTATG
Found at i:15953164 original size:26 final size:26
Alignment explanation
Indices: 15953135--15953187 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15953125 CTGATCCGAT
*
15953135 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTAGGAATAAACTCCGTATG
* *
15953161 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATAAACTCCGTATG
15953187 C
1 C
15953188 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATAAACTCCGTATG
Found at i:15953694 original size:891 final size:889
Alignment explanation
Indices: 15949707--15960521 Score: 14739
Period size: 888 Copynumber: 12.2 Consensus size: 889
15949697 GCCCAGCATG
* * * **
15949707 TGCTACCGCAACCCTCGATCCTGTCCGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
15949772 CTGACGAAACGGGTGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCCGGATGCGCAA-CTC
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC-C
* *
15949836 GTGGATAGATAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCCATGCCAATGCCATT
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* *
15949901 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTTAGCCTTCATGTGAAGTTCCATGGCAAGACGA
195 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
15949966 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACAGTTCGGGATTTTTTAAAATTTTTTCA
260 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * * *
15950031 GATGGAGTTTTTGCCCTAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAGAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
15950096 ACTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAG
390 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
15950161 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAGGGGGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
** * * *
15950226 CTCGAGGTTTGATGAGGGATAGACGACCAATATAAGGGCCAAGTACCAGTACCCATCGCATATCA
520 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
15950291 TGTGCGAACACCGCCCCGGCCCCCCTGATCGTCGGAACCCCAATGCCGCCAGTCGGGTTCTCCGA
585 TGTGCGCACACCCCCCCGGCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* * * *
15950356 CGATGGTGTCCCGACGAAGAAGAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCGC
649 CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGC
* * * * **
15950421 AACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATTTTTAGACTGGGAATGAACT
714 AACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * *
15950486 CCGTATGCCTAAGTCAACCCACTAAACGAGTGTGCGGGCGCTCAGTCGGCCAGAGGGGCAGGATG
779 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * *
15950551 CGCAAGCCAGGGATCGATCGGGT-CCCCTCTGCGTGCTGCCGATCC
844 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * *
15950596 TGCTACCACAACCCTCGATCCGGTCTGATGTTAGACTTGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * **
15950661 CCAACGAAACGAGTGGGCGGGCGGGCGGACGGGCATTACGCCAGCCAGAGAGGCGTAATGCGCAA
66 CCGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* * **
15950726 GCCATGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGAT
127 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
* * *
15950791 ATTTTTTTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGA
192 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * *
15950856 CGACTCGTTTTCTATTTTTTACGATTTTCGAAACCTTTTACGGTTCGGGATTTTTTAAAATTATT
257 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
15950921 TAAGAA-GA-TTTCTGGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTATTGGCATGCACAA
322 TCAGAAGGAGTTT-TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
**
15950984 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTACGACCATTTGAAAAAAGTGTCCCCATT
386 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
15951049 TCAGACACTTTAATGGTTATTGGCAGCAAACCTGTAAAATCTCAAGTGCTCTTTAAGGGGGTGTG
451 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
15951114 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
516 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * *
15951179 ATCATGTGCGCACACCCACCCCATCAGCCAGCCCCGATCGCCGGAACACTAATGCCGCCAGTTAG
581 ATCATGTGCGCACA-CC-CCCC--CGGCC--CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
* * * *
15951244 GTTCTCCGACAATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGAATG
640 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * *
15951309 GGCTGCCGCAACCCTCAGTCT-AGTCCGATCTTAGACTGGGAATGAATTTCGTATGCTTAGACTG
705 TGCTACCGCAACCCTCGGTCTGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * * *
15951373 AGAATGAACTCCGTATGCCTAAGTTAGCCCACGAAATGAGCGTGTGGGTGCTCAGCCGGCCAGAG
769 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
** * * * **
15951438 GGGCGGGATGCATAAGCCGGGGATCAGTCGGGTCCCCCTCTACATGCTACCGATCC
834 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * *
15951494 TGCTGCCGCAACCCTCGGTCTGATCCGACCTTAAAATGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *** * * * *
15951559 CCGACGAAACAAGCGGGCGGGCGGAAAGGCACTACGTCGGCTAGATAGGCGGGATGCGTAAGCCG
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
15951624 TGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
15951689 TTTTGGCTTGTAAATTCATACAACGGTCGCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
*
15951754 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTAAAATTTTTTCAG
261 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* ** * *
15951818 AAGGAGTTTTGGCCCCAAACTGGGTAGATATGATCCTTGTATTTTTTTTGGCATGCACAAAACAA
326 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
15951883 TTTAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
391 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
15951948 CACTTTAATGACTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
456 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
15952013 TCAAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCAT
521 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * ** * * *
15952078 GTGCGCACACCCCCTCGGCCCCCGCGATCGCCGGAACCTTAATGCTGTCGGTCAGGTTCTCCGAT
586 GTGCGCACACCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * * * *
15952143 GATGGTATCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCATCATCTGCTACCGCA
650 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCA
* *
15952208 ACCCTCAGTC-CAGTCCGATCTTAGACTGGG-ATCGAAACT-CGTATGCTTAGACTGGGAATGAA
715 ACCCTCGGTCTGA-TCCGATCTTAGACTGGGAAT-G-AACTCCGTATGCTTAGACTGGGAATGAA
* *
15952270 CT-CGTATACCTAAGTCAACCCATGAAACGAGCGTGGCGGGTCCGCTCAGCCGGCCAAGAGGGGC
777 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT-GCGGG--CGCTCAGCCGGCC-AGAGGGGC
* *
15952334 GCGGAATGCGCAAGCCAGGGGATCGG-CCGGTCCCCTTCTGCGTGCTGTCGATCC
838 G-GG-ATGCGCAAGCC-GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * *
15952388 TGCTGAACCGTAAACTCTCAGTTCAGTTCTGATCTTAGACTGAGGAATGAACTCCGTATGCCCGC
1 TGCTG--CCG-CAACCCTC-GATCCGGTCTGATCTTAGACTG-GGAATGAACTCCGTATG-CC-T
* * * *
15952453 AA-CCAAACCGATGAAACGAGCGAGCGGGCGGGCGGGCACTACGTCGGGCCAGAGAGGGGGGAT-
59 AAGCC-AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG-CCGGCCAGAGAGGCGGGATG
* * * * *
15952516 CGAAAGCCATGGGATCGATAGGGTAGTAGGTGGGGTTTAGTGCACA-CTTAATATTTCTACCAAT
122 CGCAAGCCGT-GGATCGATAGGGTGGTAGGT-GGGTTTAG-GCACATCTTCATATTTCTGCC-AT
*
15952580 GGCCCATGGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
183 -GCCAAT-GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
* * * ** ** *
15952645 TCATAGCAAGACGACTCGTTTTCTATTTTTCATGATTGTCAAAACTTTTTAATGTTCGAGATTTT
246 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * *
15952710 TTAAACTTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTG
311 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
15952775 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACGAGATTTTGTGACTATTTGAAAAAAG
376 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * * *
15952840 TATCCCCATTTCAGATACTTTAATAGCTACTTGCAGCAAACTTGTAAAATCTCAAATGCTCTTTA
441 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
15952905 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
506 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
*
15952970 CCCATCGCACATCATGTGCGCACACCCCCCTCGGCCCTCCCGATCATCGGAACCCCAATGCCGCC
571 CCCATCGCACATCATGTGCGCACACCCCCC-CGGCCC-CCCGATCGTCGGAACCCCAATGCCGCC
*
15953035 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
634 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
** *
15953100 AGCATGTGCTACCATAACCCTCGGTCTGATCCGATCTTAGACTGGGAATAAACTCCGTATGCTTA
699 AGCATGTGCTACCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * *
15953165 GACTAGGAATGAACTTCGTATGCCTAAGTCAACTCACGAAACAAGCGTGCGGGCGCTCAGCCGGC
764 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * **
15953230 CAGAGGGGCGGGATGTGCAAGCCGAGGATCGGTCGGGTCCCCCTCTATGTGCTGTCGATCC
829 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
15953291 TGCTGTCGCAACTCTCGATCCAGTCTGAACTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
15953356 CAGACGAAACGAGCGGGCTGGCAGGCGAGCACTACGTCGGCCAGAGAGGCGGGAAGCGTAAGCCA
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * **
15953421 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTCCCGTGTAAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
15953486 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
15953551 TCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTAAATTTTTTCAG
261 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * *
15953616 AAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTGTTGGCATGCACAAAACAA
326 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
15953681 TTCAG-TAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
391 TTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * **
15953745 ACACTTTAATGGCTACTGACAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGAAGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
15953810 CTCGAGGCTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCA
520 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
15953875 TGTGCGCACACCCCTCCGACCCCCCGATCGTCGGAACCCCAATGCCGACGGTCAAGTTCTCCGGC
585 TGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
** * * ** *
15953940 GATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGACCCCTGCATGTGCTGTCACA
650 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCA
* ** * *
15954005 ACCCTCGGTC-CAGTCCGATCTTAGACTGGGAATGAACTTTGTATGCTTACACTGGGAATGCACT
715 ACCCTCGGTCTGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * ** *
15954069 CCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGTGGCAAGATT
779 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * *
15954134 CACAAGCCGGGGATTGCTCGGGTCCCCCTCTGCGTGCTGTTGATCC
844 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * ** ** * *
15954180 TGCTACCACAATGCTCGATTTGATCTAATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
15954244 CCGACGAAATGAGTGGGTGGGTGGGCGAGCGCTACGCTGGCCAGAGAGGCGGGATGCGAAAGCCG
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * * * *
15954309 TTGATCGATAGGGTAGTAGGTTGGTTTAGGCACATCTTCATATATCTGCCATGTCATTGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
15954374 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAGGCCTTCATGTGAAGTTTCATGGCAAGACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * *
15954439 TCGTTTTCTACTTTGCACGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTCAG
261 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * *
15954504 AAGGCGTTTTGGCCCCAAACTTGGTAGACCTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
326 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * *
15954569 TTCAGCTAAAAAATCAAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTATCCCCA-TTCAGA
391 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
15954633 TACTTTAATGGCTACTTGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGGGAGTTA
456 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
15954698 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCATATCAT
521 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
15954763 GTGCGCACACCCCCCCGACCCCCCCGATC--CGGAACCCCATTACCGCCGGTCAGGTTCTCCGAC
586 GTGCGCACACCCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * * *
15954826 GATGGTGTCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCACA
650 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCA
* * ** * * *
15954891 ACCTTCAGTCCAATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGATTGGGAATGAACTT
715 ACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
15954956 CGTATGCCTAAGTCAACCCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
780 CGTATGCCTAAGTCAA-CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * *
15955021 CGCAAGTCGGGGATCGGTCAGGTCCCCTTCTGCGTGCTGTCGATCC
844 CGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * ** *
15955067 TGCTAG-CACAACCCTC-AGTTCGGTCCGATCTTAGACTGGGAATGAACTCTATATGCCGAAGCC
1 TGCT-GCCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
15955130 AACCAATGAAACGAGCGGGCGGGCGGGTGGGCACTACGCCGGCCATAGAGGCGGGATGCGAAAGC
64 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * * * *
15955195 CTTGGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCATCATATTTGTGCCGTGCCAATGCCAT
129 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * * *
15955260 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTATGGCAGGATG
194 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * **
15955325 ACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGATCAAGATTTTTTAAAATTTTTTC
259 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * *
15955390 AAAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGCTGGCGTGTACAAAGA
324 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
15955455 AATTCAGCTAAAAATTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
15955520 GACACTTTAATGCCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
15955584 TCTTGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATC
519 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
*
15955649 ATGTGCGCACA-CCCCCCGGCCCACCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCG
584 ATGTGCGCACACCCCCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
** * * ** * *
15955713 GTGATGGTCTCCTGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATCTGCTGCCG
648 ACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
* *
15955778 CAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
713 CAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
** * * *
15955843 TCCGTATGCCTAAGTCAGTCCATGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGAGGCGGGAT
778 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * *
15955908 GCCCAAGCCGGGGATCGATCGGGTCTCCTTCTGCGTGCTGTCGATCC
843 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
** *
15955955 TGCTGCCATAACCCTCTG-TCCGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
1 TGCTGCCGCAACCCTC-GATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15956019 ACTGACGAAACGAGCGGGCGGGCGGGCCGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
65 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
*
15956084 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * * *
15956149 TTTTTGGCTTTTAAATTCATACAATGGTCCCCTAAGCCCTCATGTGAAGTTTCATGGCAAGACGA
195 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
15956214 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTA
260 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * *
15956279 GAAAGAGTTTTGGCCCCAAACTTGGTAGACCTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
15956344 ATTCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAG
390 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * * *
15956409 ATACTTTAATGGCTACTTGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGGGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
15956474 CTCGAGGTTTGATGAGGGATA-GGGGCGAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
520 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
15956538 CGTGCGCACA-CCCCCCGGCTCCCCTCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
585 TGTGCGCACACCCCCCCGGC-CCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * *
15956602 GCGATGGTGTCCAGGCGAAGAAAAATGCGGCACCAGCATATGCCCGAGCCCAGCATGTGCTATCG
648 ACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
15956667 CAA-CC-C--T-TG----G-TC-----C--------AA-TCCG-AT-CTTAGACTGGGAATGAAC
713 CAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
15956706 TCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCCGGCGCTCAGCCGGCCAGAGGGGTGGGAT
778 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * *
15956771 GCGCAAGTCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
843 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
15956818 TGCTGCTGCAACCCTCAATCCGATAC-GATCTTAGACTGGGAATTAACTCCGTATCCCTAAGCCA
1 TGCTGCCGCAACCCTCGATCCGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
15956882 ACCGAC-AAA--A-CGAGCGGGCGGGCGGGCACTACGTCGGCCCGAGAGACGGGATGCGCAAGTC
65 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
15956943 GTGGATCGATAAGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATT
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* *
15957008 TTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
195 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
15957073 CTCGTTTTCTATTTTTCACGATTTTTGAAATTTTTTAAGGTTCTGGATTTTTTAAAATTTTTTCA
260 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * *
15957138 TAAGGCGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTCGGCATGCACAAAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAA
15957202 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
15957267 TACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
15957332 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
519 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *
15957397 ATGTGCACACA-CCCCCCGGCTCCCCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCC
584 ATGTGCGCACACCCCCCCGG--CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * *
15957461 -AGCGATGGTGTCCCGGCGAAGAAAAATACGACACCAGCATATGCCCAAGCCCAGCATGTGCTAC
647 GA-CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTAC
* *
15957525 CGTAA-AC-C--T-TG----G-TC-----C--------AA-TCCG-AT-CTTAGACTGGGAATGA
711 CGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * * *
15957564 ACTTCGTATGCCTAAGTCAACACACGAAACGAACGTACGGGCGTTCAACCGGCCAGAGGGCCGGG
776 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * *
15957629 ATACGCAAGCCGAGGATCGGTCGGGTTCCCCTCTGCGTGCTG-CTGATCC
841 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-GATCC
* * * **
15957678 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATAAACTTTGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * **
15957743 TCGACGAAAC-AGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACAAGATGCGCAAGCC
66 CCGACGAAACGA-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
15957807 GTAGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCACGCCAATGCCATT
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
15957872 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
195 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* *
15957937 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTTTCA
260 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * **
15958002 GAAGAAGTTTTGCCCCCAAACAAGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
15958067 ATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAG
390 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
** *
15958132 ACACTTTAATGGCTACAAGCAGCAAACCTGTAAAATCTCAAGTGCTCTTTAAGGGGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
15958197 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
520 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * **
15958262 TGTGCGCACACCCCGCCCCAGCCTCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
585 TGTGCGCACA-CCC-CCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * *
15958327 ACGATGGTGTCCTGACAAAGAAAAATGCAGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCG
648 ACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
* * * * *
15958392 CAACCTTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAAC
713 CAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * **
15958457 TCCGTATGCCTATGTCAACCCATGAAACGAGCGTGCAGGCGCTCAGCTAGCCAGAGGGGCGGGAT
778 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * *
15958522 GCGCAAGTCGGGGATTGATCGGGTCCTCCTCTACTTGCTG-CTGATCC
843 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-GATCC
* ** ** **
15958569 TGTTATCGCAACCCTCGATCCGGTCCCATCTTAGACTTTGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
15958634 CCGACGAAACGGGCAGGCGAGCGGGTGGGCACTACGCCGGCCAGAAAGGCGGGATGCGCAAGCCG
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* **
15958699 TGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGATATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
15958764 TTCTGGCTTGTAAATT-ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
15958828 TCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
261 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
*
15958893 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAT
326 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
15958958 TTCAGCTAAAAACTCGAAGTCTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
391 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
15959023 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTTAAGCGGGTGTGAGTTC
456 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
15959088 TCGAGGTTTGATGAGGGATAGGGGGCCAATATTAGGGGCAAGTACCAGCACCCATCGCACATCAT
521 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
15959153 GTGTGCACACCCCCCCGGCCACCCCCGATCGTCGAAACCCCAATACCGTCGGTCAGGTTCTTCGG
586 GTGCGCACACCCCCCCGG-C-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* * ** * * *
15959218 CGATGGTG-CCCTGGA-AAAGAAAAATGCGACGGCAGCACATGCCTGAGCCCAGCATGTGCCATC
649 CGATGGTGTCCC--GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACC
* * * * *
15959281 GTAACCCTTGGTCTGATCCGTTCTTAGACTGGGAATGAACTTCGTATGCTTAAACTGGGAATGAA
712 GCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
** * * * *
15959346 CTTTGTATGCCCAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAGCCGACCAGAGGGGGCGGG
777 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA-GGGGCGGG
* ** * *
15959411 ATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATCC
841 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * ** * * * *
15959460 TGTTACAACAACCCTTGATCCAGTCTGATCTTAGACTTGGAATGAACTCCGTATGCCTAAACCAA
1 TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
15959525 CCGACG-AA--A-CGGGCGGGTGGGCGGGCACTACGCCAGCCATAGAGGCGGGATGCGTAAGCCG
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* **
15959586 TGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGCCATGCCAATGATATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
15959651 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
15959716 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
261 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * *
15959781 AAGGCGTTTTCGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTGTTTGGCATGCACAAAAAT
326 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG-TTGGCATGCACAAAAAA
15959845 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
390 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
15959910 ACTCTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
15959975 CTCGAGGTTTGATGAGGGATAGGGGGCGAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
520 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** *
15960040 TGTGCGCACACCCCCCCGACCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCC-A
585 TGTGCGCACACCCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* ** * * * * *
15960104 GCGATGGTGTCTCGGTGAAGAAAAATGCGGCACTAGCACATGCCCGAGCTCAGAATGGGCTTCCG
649 -CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
*
15960169 CAACCTTCGGTCT-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
713 CAACCCTCGGTCTGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * ** * *
15960233 TTCCGTATGCATAAGTCAGTCCACGAAATGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGA
777 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
*** * * *
15960298 TGCGCAAGCAAAGGATCGATCGGGTCCCCTTCTGTGTGCTGTCGATCC
842 TGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
** * *
15960346 TGCTGCCATAACCCTC-AGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTA
1 TGCTGCCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
15960410 ACCGATG-AA--A-CGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
65 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
15960471 TTGGATCGATAGGGTGGTAGGTGTGTTTAGGCACATCTTCATATTTTTGCC
130 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC
15960522 GTCGTAGACT
Statistics
Matches: 8803, Mismatches: 992, Indels: 265
0.88 0.10 0.03
Matches are distributed among these distances:
858 2 0.00
859 428 0.05
860 346 0.04
861 7 0.00
862 5 0.00
863 174 0.02
864 482 0.05
865 102 0.01
866 5 0.00
867 6 0.00
869 1 0.00
870 1 0.00
874 2 0.00
875 2 0.00
879 2 0.00
880 2 0.00
884 2 0.00
885 2 0.00
886 366 0.04
887 575 0.07
888 1829 0.21
889 835 0.09
890 565 0.06
891 801 0.09
892 258 0.03
893 252 0.03
894 512 0.06
895 45 0.01
896 50 0.01
897 231 0.03
898 118 0.01
899 34 0.00
900 11 0.00
901 44 0.00
902 40 0.00
903 60 0.01
904 9 0.00
905 14 0.00
906 121 0.01
907 277 0.03
908 152 0.02
909 33 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (889 bp):
TGCTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
ATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAA
CCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCG
CAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
Found at i:15954074 original size:26 final size:26
Alignment explanation
Indices: 15954024--15954076 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15954014 CCAGTCCGAT
* **
15954024 CTTAGACTGGGAATGAACTTTGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
15954050 CTTACACTGGGAATGCACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
15954076 C
1 C
15954077 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.21, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:15954946 original size:26 final size:26
Alignment explanation
Indices: 15954910--15954962 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
15954900 CCAATCCGAT
15954910 CTTAGACTGGGAATGAAC-TCTGTATG
1 CTTAGACTGGGAATGAACTTC-GTATG
*
15954936 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
15954962 C
1 C
15954963 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:15955835 original size:26 final size:26
Alignment explanation
Indices: 15955799--15955851 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15955789 CTGGTTCGAT
15955799 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15955825 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15955851 C
1 C
15955852 CTAAGTCAGT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15958449 original size:26 final size:26
Alignment explanation
Indices: 15958413--15958465 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15958403 CCGGTCCGAT
*
15958413 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15958439 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15958465 C
1 C
15958466 CTATGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15959339 original size:26 final size:26
Alignment explanation
Indices: 15959303--15959355 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15959293 CTGATCCGTT
*
15959303 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAAACTGGGAATGAACTTCGTATG
*
15959329 CTTAAACTGGGAATGAACTTTGTATG
1 CTTAAACTGGGAATGAACTTCGTATG
15959355 C
1 C
15959356 CCAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTTCGTATG
Found at i:15960219 original size:26 final size:26
Alignment explanation
Indices: 15960190--15960242 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15960180 CTAGTCCGAT
15960190 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15960216 CTTAGACTGGGAATGAATTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15960242 C
1 C
15960243 ATAAGTCAGT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15967066 original size:26 final size:26
Alignment explanation
Indices: 15967028--15967106 Score: 106
Period size: 26 Copynumber: 3.0 Consensus size: 26
15967018 CTGATCCAAT
* *
15967028 CTTAGACTAGGAATGAAC-CCTGTATG
1 CTTAGACTGGGAATGAACTCC-ATATG
15967054 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
15967080 CGTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15967106 C
1 C
15967107 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 4, Indels: 2
0.89 0.07 0.04
Matches are distributed among these distances:
26 46 0.96
27 2 0.04
ACGTcount: A:0.30, C:0.19, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15968759 original size:26 final size:26
Alignment explanation
Indices: 15968723--15968775 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15968713 CTGGTCCAAT
15968723 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15968749 CTTAGACTGGGGATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15968775 C
1 C
15968776 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15969647 original size:26 final size:26
Alignment explanation
Indices: 15969611--15969663 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15969601 CTAGTTCGAT
15969611 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15969637 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15969663 C
1 C
15969664 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15970532 original size:26 final size:26
Alignment explanation
Indices: 15970496--15970548 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15970486 CTGGTTCGAT
15970496 CTTAGACTGGGAACGAACTCCATATG
1 CTTAGACTGGGAACGAACTCCATATG
* *
15970522 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCATATG
15970548 C
1 C
15970549 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCATATG
Found at i:15970921 original size:885 final size:885
Alignment explanation
Indices: 15967933--15972996 Score: 7131
Period size: 889 Copynumber: 5.7 Consensus size: 885
15967923 ATGTGCTGTC
* * * * ** ** *
15967933 GGGGCGGGATGTGCAAGCCGAGGATCGGTCGGGTCCCCCTCTATGTGCTGTCGATCTTGCTGTCG
1 GGGGCAGGATGCGCAAGCCGGGGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCTTGCTGCCG
* * * * * * *
15967998 TAACTCTCGATCCAGTCTGAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAA
65 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * *
15968063 ACGAGCGGGCTGGTAGGCGAGCACTACGTCGGCCAGAGAGGCGGGAAGCGTAAGCCATGGATCCA
130 ACGAGCGGGC-GG--GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* **
15968128 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTCCCATGTAAATGCCATTTTTCTGGCT
192 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
*
15968193 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTC
257 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * *
15968258 TATTTTTCACAATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTAAATTTTTTCAGAAGGATTT
322 TATTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * *
15968323 TTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCAA
387 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
15968388 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
452 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* ** **
15968453 TGGCTACTGACAAG-AAACCTGTAAAATCTCAAATGCTCTTTAAGAAGGTGTGAGTTCTCGAGCC
517 TGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* *
15968517 TTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCATGTGCGCA
581 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * *
15968582 CACCCCTCC-GACCCCCCGATCGCCGGAACCCTAATGCCAACGGTCAAGTTCTCCGGCAATGGTG
646 CACCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGACGGTCAGGTTCTCCGGCGATGGTG
** * * * *
15968646 TCCCGGTGAAGAAAAATGCTGCACCAGCACATGCCCGACCCCTGCATGTGCTGCCACAACCCTCG
710 TCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
* * * *
15968711 GTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGGATGAACTCCGTATGC
775 GTCTAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
** * **
15968776 CTAAGTCAACATACGAAACGAGCGTGCGGGCGCTCAGCCGTCTGGA
840 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
* * * * * *
15968822 GGGGCAGGATGCGTAAACCGAGGATCAATCGGCTCGCCCTCTGCATGCTACCGATCTTGCTGCCA
1 GGGGCAGGATGCGCAAGCCGGGGATCGATCGGGTC-CCCTCTGCGTGCTACCGATCTTGCTGCC-
* * * *
15968887 G-AACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACTGACGA
64 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * *
15968951 AATGAGCGGGCGGAGGGGCGGGCACTACTCCGACCAGAGAGGCGGGATGTGCAAGCCATGGATTG
129 AACGAGCGGGC---GGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
15969016 ATAGGGAGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
191 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* * *
15969081 TTATAAATTCATACAATTGG-CCCTTAAGCCTTCATGTGAAGTTTCATTGCAAGACGAGTCGTTT
256 TTGTAAATTCATACAA-TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * *
15969145 TCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGAG
320 TCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * * **
15969210 GTTTGGCACCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCTTAAAAAAATTCAGC
385 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * * *
15969275 TAAAAACTCGAAGTGTACAAGATTTTATGGCAATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
450 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
15969340 AGTGGCTACTGGCAACAAAGCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
515 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
15969405 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCGC
580 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * *
15969470 ACACCCCCTGGCCCCCCCGATCGCCGGAACCCCAAT-CCGTCGGTCAGGTTCTTCGGTGATGGTG
645 ACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGACGGTCAGGTTCTCCGGCGATGGTG
* * *
15969534 TCCCGACGAAGAAAAAAGTGGCACTAGCACATGCCCGAGCCCAGCATGTG-TAGCCGCAACCCTC
710 TCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GCCGCAACCCTC
15969598 GGTCTAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
774 GGTCTAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* *
15969663 CCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAACCGACCAGA
839 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
* * * * * ** **
15969710 GGGGCAGGATACGCAAGCCGGGAATCGGTTGGGTCCCCCTCTGCGTCCTGTCGATCTTGCTATCG
1 GGGGCAGGATGCGCAAGCCGGGGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCTTGCTGCCG
* * ** * * * *
15969775 TAACCATCTATCCGGTCTGACCTTAGACTGGGAATGAACTCCATATGCCAAAGCCAACCGACGAA
65 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* ** *
15969840 ACGAGCGGGC-GGGCGGGCACTACGCTGGTTAGAGAGGCGGGATGCACAAGCCGTGGATCGATAG
130 ACGAGCGGGCGGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* *
15969904 GGTGGTAGGTGGGTTTGGGCACATCTTCATATTTTTGCCAT-CCAATGCCATTTTTCTGGCTTGT
195 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
* *
15969968 AAATTCATACTATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTAT
260 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * * * *
15970033 TTTTCCCAATTTTTGAAACTTTTTGCAGTTCAGGATTTTTTTAAATTTTTTCAAAAGGAGTTTTG
325 TTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* * * * *
15970098 GGCCCTAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGAACGCAAAAAAAAATTCAGCTAAAA
390 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
15970163 ATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGG
455 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * *
15970228 CTACTGGCAGTAAACCTATAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGA
520 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
15970293 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
585 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * **
15970358 CCACGGCCCACCCCGATTGCCGGAACCCCAATGCCGACGGTTAGGTTCTTTGGCGATGGTGTCCC
650 CCCCGGCCC-CCCCGATCGCCGGAACCCCAATGCCGACGGTCAGGTTCTCCGGCGATGGTGTCCC
*
15970423 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCT
714 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT
* * *
15970488 GGTTCGATCTTAGACTGGGAACGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
779 AGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *
15970553 GTCAACCCACGAAACGAGCGTGCAGGCACTCAGCTGACCAGA
844 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
* * * *
15970595 GGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCTTTGCATGCTACCGATCTTGCTGCCAC
1 GGGGCAGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTCTGCGTGCTACCGATCTTGCTGCCGC
* * * *
15970660 AACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTGTGCCTAAGCCAACAGATGAAA
66 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
15970725 CGAGCGGGC-GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
131 CGAGCGGGCGGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
*
15970789 GTAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
196 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
*
15970854 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTAGTTTTCTATT
261 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * * *
15970919 TTTCATAATTTTTGAAACTTTTTAAGGTTCAGGATTTTTTACAATTTTTTTAGAAGGCGTTTTGG
326 TTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * * * *
15970984 CACCGAACTTGGTAGACATGATCCTTGCATTTTTGTTGGCATGCACAAAAACATTCACCTAAAAA
391 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * * * * *
15971049 CGCAAAGTGTACAAGATTTTATGACCGTTTGAAAAAAGAGTCCCAATTTCAGACACTTTAATGGC
456 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
*
15971114 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGAT
521 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
*
15971179 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGGGCACACCC
586 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CC
* * * * *
15971244 CCCCGGCCCCCACCGATCGCCGGAACCCCAATGCC-ACCGATGAGGTTCTCTGGCGACGGTGTCT
650 CCCCGGCCCCC-CCGATCGCCGGAACCCCAATGCCGA-CGGTCAGGTTCTCCGGCGATGGTGTCC
* * * * *
15971308 CGACGAAGAAAAATGCGGCATCAGCACATGCCCGAGCCTAGCATGTGCTGTCGCCACCCTCAGTC
713 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * *
15971373 CAGTTCGATCTTAGATTGGGAATGAACTCCATATGCTTAGACTGGTAATGAACTCCGTATGCCTA
778 TAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
15971438 AGTCAACCCACGAAACGAGCGTGAGGGCGCTTAGCCGGCCAGA
843 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
* * * * * *
15971481 GGGGCAGGATGCGCAAGTCGAGGATCGATCGGGTCCTCCTCTTCGTGCTACCGATCCTGCTACTG
1 GGGGCAGGATGCGCAAGCCGGGGATCGATCGGGTCC-CCTCTGCGTGCTACCGATCTTGCTGCCG
* *
15971546 CAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
65 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * *
15971611 ACGAGCGGAC-GGGTGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
130 ACGAGCGGGCGGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
*
15971675 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCTTGT
195 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
*
15971740 AAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
260 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * * *
15971805 TTTTTA-AGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTGTTCACAAGGAATTTT
325 TTTTCACA-ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* *
15971869 GGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
389 GGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
*
15971934 AAACTCGAAGTGTACAAGATTTTGTGACC-TTTAGAAAAAAGTGT-CCCATTTTAGACACTTTAA
453 AAACTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
15971997 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCCCTTTAAGGGGGTGTGAGTTCTTGAGGTT
517 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
15972062 TGATGAGGGATAGGGGCCAATATAAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
582 TGATGAGGGATA--GG---------GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
** * *
15972127 CATGTGCGCACACCCCCCGGCCCCCCCGATCATCGGAACCCCTATGCCGCCGGTCAGGTTCTCCG
636 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGACGGTCAGGTTCTCCG
* * *
15972192 GCGATGGTGTCCTGGA-GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAAGTGCTACC
701 GCGATGGTGTCC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * * * * * *
15972256 GCAACTCTTGGTC-CGATCTGAACTTTGATTGGGAATGAACTCCGTATGCCTAGACTGGGAATGA
765 GCAACCCTCGGTCTAGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * *
15972320 ACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGA
829 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
* * * * ** * * * *
15972377 GGGGCGGGATGCGAAAGTCAGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCG
1 GGGGCAGGATGCGCAAGCCGGGGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCTTGCTGCCG
* * * * * * * * *
15972442 TAACCCTCAGTCGGGTTCAATCTTAGATTGGGAATGAACTCCGTATACCGAAGCGAACCGACGAA
65 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
15972507 ACGAGCGGGCGAGCAGGCGGGCACTACGCCGGCCAGAGAGG-GGGATGCGCAAGCCGTGGATCGA
130 ACGAGCGGGCG-G--GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
*
15972571 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCTAATGCCATTTTTCTGGCT
192 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
*
15972636 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAATTTCATGGCAAGACGACTCGTTTTC
257 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * *
15972701 TATTTTTCA-AGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTGTTCACAAGGAAT
322 TATTTTTCACA-ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGT
15972765 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
386 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* *
15972830 AAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTA
451 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * * *
15972895 ATGGCTACAGGCAGCAAACCTGTAAAATCTCAAATGTTATTTAAGGGGGTGTGAGTTCTCGCGGT
516 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
*
15972960 TTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTA
581 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
15972997 TCGGTCTGAT
Statistics
Matches: 3731, Mismatches: 401, Indels: 87
0.88 0.10 0.02
Matches are distributed among these distances:
882 3 0.00
883 382 0.10
884 276 0.07
885 592 0.16
886 245 0.07
887 445 0.12
888 377 0.10
889 599 0.16
890 4 0.00
891 2 0.00
895 3 0.00
896 301 0.08
897 19 0.01
898 123 0.03
899 336 0.09
900 24 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (885 bp):
GGGGCAGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTCTGCGTGCTACCGATCTTGCTGCCGC
AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
CGAGCGGGCGGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGACGGTCAGGTTCTCCGGCGATGGTGTCCCGA
CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTAG
TTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGA
Found at i:15971411 original size:26 final size:26
Alignment explanation
Indices: 15971382--15971434 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15971372 CCAGTTCGAT
*
15971382 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
15971408 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15971434 C
1 C
15971435 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15971807 original size:887 final size:884
Alignment explanation
Indices: 15967933--15972996 Score: 7015
Period size: 885 Copynumber: 5.7 Consensus size: 884
15967923 ATGTGCTGTC
* * * ** ** *
15967933 GGGGCGGGATGTGCAAGCCGAGGATCGGTCGGGTCCCCCTCTATGTGCTGTCGATCTTGCT-GTC
1 GGGGCAGGATGCGCAAGCCGAGGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCTTGCTACT-
* * * * * * *
15967997 GTAACTCTCGATCCAGTCTGAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGA
64 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * * *
15968062 AACGAGCGGGCTGGTAGGCGAGCACTACGTCGGCCAGAGAGGCGGGAAGCGTAAGCCATGGATCC
129 AACGAGCGGAC--G--GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* **
15968127 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTCCCATGTAAATGCCATTTTTCTGGC
190 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
*
15968192 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTT
255 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * *
15968257 CTATTTTTCACAATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTAAATTTTTTCAGAAGGATT
320 CTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGT
* * *
15968322 TTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCA
385 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
15968387 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
450 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* ** *
15968452 ATGGCTACTGACAAG-AAACCTGTAAAATCTCAAATGCTCTTTAAGAAGGTGTGAGTTCTCGAGC
515 ATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
15968516 CTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCATGTGCGC
579 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * *
15968581 ACACCCCTCC-GACCCCCCGATCGCCGGAACCCTAATGCCAACGGTCAAGTTCTCCGGCAATGGT
644 ACACCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCTGGCGATGGT
** * * * *
15968645 GTCCCGGTGAAGAAAAATGCTGCACCAGCACATGCCCGACCCCTGCATGTGCTGCCACAACCCTC
708 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * * *
15968710 GGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGGATGAACTCCGTATG
773 GGTCTAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
** * * **
15968775 CCTAAGTCAACATACGAAACGAGCGTGCGGGCGCTCAGCCGTCTGGA
838 CCTAAGTCAACCCACGAAACGAGCGTGAGGGCGCTCAGCCGACCAGA
* * * * * * *
15968822 GGGGCAGGATGCGTAAACCGAGGATCAATCGGCTCGCCCTCTGCATGCTACCGATCTTGCTGCCA
1 GGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTC-CCCTCTGCGTGCTACCGATCTTGCT-ACT
* * * *
15968887 G-AACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACTGACGA
64 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-
* * * * * * *
15968951 AATGAGCGGGCGGAGGGGCGGGCACTACTCCGACCAGAGAGGCGGGATGTGCAAGCCATGGATTG
128 AA--A-CGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
15969016 ATAGGGAGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
190 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* * *
15969081 TTATAAATTCATACAATTGG-CCCTTAAGCCTTCATGTGAAGTTTCATTGCAAGACGAGTCGTTT
255 TTGTAAATTCATACAA-TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * *
15969145 TCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGAG
319 TCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAG
* * * **
15969210 GTTTGGCACCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCTTAAAAAAATTCAGC
384 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * * *
15969275 TAAAAACTCGAAGTGTACAAGATTTTATGGCAATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
449 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
15969340 AGTGGCTACTGGCAACAAAGCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
514 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
15969405 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCGC
579 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* ** *
15969470 ACACCCCCTGGCCCCCCCGATCGCCGGAACCCCAAT-CCGTCGGTCAGGTTCT-TCGGTGATGGT
644 ACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCT-GGCGATGGT
* * *
15969533 GTCCCGACGAAGAAAAAAGTGGCACTAGCACATGCCCGAGCCCAGCATGTG-TAGCCGCAACCCT
708 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GCCGCAACCCT
15969597 CGGTCTAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
772 CGGTCTAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* *
15969662 GCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAACCGACCAGA
837 GCCTAAGTCAACCCACGAAACGAGCGTGAGGGCGCTCAGCCGACCAGA
* * * * **
15969710 GGGGCAGGATACGCAAGCCG-GGAATCGGTTGGGTCCCCCTCTGCGTCCTGTCGATCTTGCTA-T
1 GGGGCAGGATGCGCAAGCCGAGG-ATCGATCGGGT-CCCCTCTGCGTGCTACCGATCTTGCTACT
* * ** * * * *
15969773 CGTAACCATCTATCCGGTCTGACCTTAGACTGGGAATGAACTCCATATGCCAAAGCCAACCGACG
64 -GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * ** *
15969838 AAACGAGCGGGCGGGCGGGCACTACGCTGGTTAGAGAGGCGGGATGCACAAGCCGTGGATCGATA
128 AAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* *
15969903 GGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTTTGCCAT-CCAATGCCATTTTTCTGGCTTG
193 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
* *
15969967 TAAATTCATACTATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTA
258 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * * * *
15970032 TTTTTCCCAATTTTTGAAACTTTTTGCAGTTCAGGATTTTTTTAAATTTTTTCAAAAGGAGTTTT
323 TTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * * * *
15970097 GGGCCCTAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGAACGCAAAAAAAAATTCAGCTAAA
388 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
15970162 AATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATG
453 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * * *
15970227 GCTACTGGCAGTAAACCTATAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTG
518 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
15970292 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
583 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
* * * *
15970357 CCCACGGCCCACCCCGATTGCCGGAACCCCAATGCCGA-CGGTTAGGTTCTTTGGCGATGGTGTC
648 CCCCCGGCCC-CCCCGATCGCCGGAACCCCAATGCC-ACCGGTCAGGTTCTCTGGCGATGGTGTC
*
15970421 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGT
711 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * *
15970486 CTGGTTCGATCTTAGACTGGGAACGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCT
776 CTAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* *
15970551 AAGTCAACCCACGAAACGAGCGTGCA-GGCACTCAGCTGACCAGA
841 AAGTCAACCCACGAAACGAGCGTG-AGGGCGCTCAGCCGACCAGA
* * * * * **
15970595 GGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCCCTTTGCATGCTACCGATCTTGCTGCCAC
1 GGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCCCTCTGCGTGCTACCGATCTTGCTACTGC
* * * *
15970660 AACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTGTGCCTAAGCCAACAGATGAAA
66 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
*
15970725 CGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
131 CGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
*
15970790 TAGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
196 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
*
15970855 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTAGTTTTCTATTT
261 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * * * *
15970920 TTCATAATTTTTGAAACTTTTTAAGGTTCAGGATTTTTTACAATTTTTTTAGAAGGCGTTTTGGC
326 TTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
* * * * * *
15970985 ACCGAACTTGGTAGACATGATCCTTGCATTTTTGTTGGCATGCACAAAAACATTCACCTAAAAAC
391 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* * * * * *
15971050 GCAAAGTGTACAAGATTTTATGACCGTTTGAAAAAAGAGTCCCAATTTCAGACACTTTAATGGCT
456 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
*
15971115 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATG
521 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
*
15971180 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGGGCACACCCC
586 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC
* * * *
15971245 CCCGGCCCCCACCGATCGCCGGAACCCCAATGCCACCGATGAGGTTCTCTGGCGACGGTGTCTCG
650 CCCGGCCCCC-CCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCTGGCGATGGTGTCCCG
* * * * * *
15971310 ACGAAGAAAAATGCGGCATCAGCACATGCCCGAGCCTAGCATGTGCTGTCGCCACCCTCAGTCCA
714 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTA
* * *
15971375 GTTCGATCTTAGATTGGGAATGAACTCCATATGCTTAGACTGGTAATGAACTCCGTATGCCTAAG
779 GTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
15971440 TCAACCCACGAAACGAGCGTGAGGGCGCTTAGCCGGCCAGA
844 TCAACCCACGAAACGAGCGTGAGGGCGCTCAGCCGACCAGA
* * *
15971481 GGGGCAGGATGCGCAAGTCGAGGATCGATCGGGTCCTCCTCTTCGTGCTACCGATCCTGCTACTG
1 GGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCC-CCTCTGCGTGCTACCGATCTTGCTACTG
* *
15971546 CAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
65 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* *
15971611 ACGAGCGGACGGGTGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
130 ACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
*
15971676 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCTTGTA
195 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
*
15971741 AATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
260 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * *
15971806 TTTTA-AGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTGTTCACAAGGAATTTTG
325 TTTCACA-ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* *
15971870 GCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
389 GCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
15971935 AACTCGAAGTGTACAAGATTTTGTGACC-TTTAGAAAAAAGTGT-CCCATTTTAGACACTTTAAT
453 AACTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* *
15971998 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCCCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
517 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
15972063 GATGAGGGATAGGGGCCAATATAAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
582 GATGAGGGATA--GG---------GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
** * * *
15972128 ATGTGCGCACACCCCCCGGCCCCCCCGATCATCGGAACCCCTATGCCGCCGGTCAGGTTCTCCGG
636 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCTGG
* * *
15972193 CGATGGTGTCCTGGA-GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAAGTGCTACCG
701 CGATGGTGTCC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * * * * *
15972257 CAACTCTTGGTC-CGATCTGAACTTTGATTGGGAATGAACTCCGTATGCCTAGACTGGGAATGAA
765 CAACCCTCGGTCTAGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* *
15972321 CTTCGTATGCCTAAGTCAACCCACGAAACGAGCGT-ACGGGCGCTCAGCCGGCCAGA
829 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGA-GGGCGCTCAGCCGACCAGA
* * * ** * * * *
15972377 GGGGCGGGATGCGAAAGTC-AGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCCTGCT-GT
1 GGGGCAGGATGCGCAAGCCGA-GGATCGATCGGGT-CCCCTCTGCGTGCTACCGATCTTGCTACT
* * * * * * * * *
15972440 CGTAACCCTCAGTCGGGTTCAATCTTAGATTGGGAATGAACTCCGTATACCGAAGCGAACCGACG
64 -GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
*
15972505 AAACGAGCGGGCGAGCAGGCGGGCACTACGCCGGCCAGAGAGG-GGGATGCGCAAGCCGTGGATC
128 AAACGAGC--G-GA-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
*
15972569 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCTAATGCCATTTTTCTGG
189 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
*
15972634 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAATTTCATGGCAAGACGACTCGTTT
254 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * *
15972699 TCTATTTTTCA-AGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTGTTCACAAGGA
319 TCTATTTTTCACA-ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGA
*
15972763 ATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
383 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* *
15972828 CTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATT
448 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * * *
15972893 TAATGGCTACAGGCAGCAAACCTGTAAAATCTCAAATGTTATTTAAGGGGGTGTGAGTTCTCGCG
513 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
*
15972958 GTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTA
578 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
15972997 TCGGTCTGAT
Statistics
Matches: 3726, Mismatches: 392, Indels: 115
0.88 0.09 0.03
Matches are distributed among these distances:
882 3 0.00
883 382 0.10
884 281 0.08
885 590 0.16
886 248 0.07
887 449 0.12
888 363 0.10
889 586 0.16
890 6 0.00
891 1 0.00
892 1 0.00
893 6 0.00
895 6 0.00
896 299 0.08
897 19 0.01
898 123 0.03
899 338 0.09
900 25 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (884 bp):
GGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCCCTCTGCGTGCTACCGATCTTGCTACTGC
AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
CGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
CCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCTGGCGATGGTGTCCCGAC
GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTAGT
TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
AACCCACGAAACGAGCGTGAGGGCGCTCAGCCGACCAGA
Found at i:15972092 original size:12 final size:12
Alignment explanation
Indices: 15972075--15972105 Score: 62
Period size: 12 Copynumber: 2.6 Consensus size: 12
15972065 TGAGGGATAG
15972075 GGGCCAATATAA
1 GGGCCAATATAA
15972087 GGGCCAATATAA
1 GGGCCAATATAA
15972099 GGGCCAA
1 GGGCCAA
15972106 GTACCAGCAC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 19 1.00
ACGTcount: A:0.39, C:0.19, G:0.29, T:0.13
Consensus pattern (12 bp):
GGGCCAATATAA
Found at i:15974479 original size:26 final size:26
Alignment explanation
Indices: 15974428--15974480 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15974418 CCAGTCTGAT
*
15974428 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
15974454 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15974480 C
1 C
15974481 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15975088 original size:774 final size:772
Alignment explanation
Indices: 15973601--15975154 Score: 2317
Period size: 774 Copynumber: 2.0 Consensus size: 772
15973591 AAAATGCGGC
* * *
15973601 ACCAGCACATGCTCGAGCCCAGCAAGTGCTACCGCAACTCTCGGTCCGATCTGAACTTTGATTGG
1 ACCAGCACATGCTCGAGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGATCTGAACTTAGACTGG
* *
15973666 GAATGAACTTCGTATGCCTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAG
66 GAATGAACTTCATATGCCTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * * * * *
15973731 CGTACGGGCGCTCAACCGGCCATAGGGGCGGGATACGCAAGTCGGGGATCGGCCAGGTCCCCCTT
131 CGTACGGGCGCTCAACCGACCAGAGGGACAGGATACGCAAGCCAGGGATCGACCAGGTCCCCCTC
***
15973796 TACGTGCTACCGATCCTGCTACTGTAAACCTCGGCCCGGCTCGATCTTAGACTAGGAATGAACTC
196 TACGTGCTACCGATCCTGCTACCACAAACCTCGGCCCGGCTCGATCTTAGACTAGGAATGAACTC
* * ***
15973861 CGTATGCCGAAGCCAACCGACGAAACGAACGGGTGAGCGGACGGGCACTACGTCGGCCAGAGAGG
261 CGTATGCCGAAGCCAACCGACGAAACGAACGGGCGAGCGGACAGGCACTAAACCGGCCAGAGAGG
* *
15973926 GGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAACTTCATATTTCTACC
326 GGGATGCGCAAGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACAACTTCATATTTCTACC
*
15973991 GTGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCATGTGAAGTT
391 ATGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCATGTGAAGTT
* * ** *
15974056 TTATGGCAAGACACTCATTTTTTATTTTTCAAGATTTTTGAAACATTTTACGATTCGGGATTTTT
456 TCATGGCAAGACACTCATTTTCTATTTTTCAAGATTTTCAAAACATTTTACGATTCGAGATTTTT
*
15974121 TAAAATTTTCTCAGAACGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
521 TAAAATTTTCTCAGAACGAGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGG
*
15974186 CACGCACAAAAAAATTCAGCTAAAAACTTAAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGT
586 CACGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGT
* *
15974251 GTCCCCATTTCAGACAATTTAATGGCTATAGGTAGCAAACCTGTAAAATCTCAAATGCTGTTTAA
651 GACCCCATTTCAGACAATTTAATGGCTATAGGCAGCAAACCTGTAAAATCTCAAATGCTGTTTAA
* *
15974316 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
716 GGGGGTATGAGTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * *
15974373 ACCAGCACATGC-CTGAGCCCAGCATGTGCTACCGTAACCCTTGGTCC-AGTCTGATCTTAGACT
1 ACCAGCACATGCTC-GAGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGA-TCTGAACTTAGACT
* *
15974436 GGGAATGAACTTCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACG
64 GGGAATGAACTTCATATGCCTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
** *
15974501 AGCGTACGGGCGCTCAGTCGACCAGAGGGACAGGATGCGCAAGCCAGGGATCGACCGAGG-CCCC
129 AGCGTACGGGCGCTCAACCGACCAGAGGGACAGGATACGCAAGCCAGGGATCGACC-AGGTCCCC
* * * * * *
15974565 CTCTACGTGCTACCGATCCTGCTGCCACAACCCTTGGTCC-GATCTGATCTTAGACT-GCTAATG
193 CTCTACGTGCTACCGATCCTGCTACCACAAACCTCGGCCCGGCTC-GATCTTAGACTAG-GAATG
* * * * * *
15974628 AACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGTGGGCAGGCACTAAACCGGCCAG
256 AACTCCGTATGCCGAAGCCAACCGACGAAACGAACGGGCGAGCGGACAGGCACTAAACCGGCCAG
* * *
15974693 AGAGGCGGGATGCGTAAGCTGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATT
321 AGAGG-GGGATGCGCAAGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACAACTTCATATT
* * *
15974758 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
385 TCTACCATGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCATGT
* *
15974823 GAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGATTCGA
450 GAAGTTTCATGGCAAGAC-ACTCATTTTCTATTTTTCAAGATTTTCAAAACATTTTACGATTCGA
* * *
15974888 GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTT
514 GATTTTTTAAAATTTTCTCAGAACGAGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTT
* *** * * *
15974953 TTTTTGGTGTGCACAAAACAATTCAGCTAAAAACTCAAAGTTTACAAGATTTTGTGACCATTTGA
579 TTGTTGGCACGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGCGACCATTTGA
* *
15975018 AAAAAGTGACCCCATTTCAGACAATTTAATGGCTATTGGCAGCAAACCTGTAAAATCTGAAATGC
644 AAAAAGTGACCCCATTTCAGACAATTTAATGGCTATAGGCAGCAAACCTGTAAAATCTCAAATGC
*
15975083 TGTTTAAGGGGGTATGATTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
709 TGTTTAAGGGGGTATGAGTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
15975147 ACCAGCAC
1 ACCAGCAC
15975155 CCATCGCACA
Statistics
Matches: 698, Mismatches: 77, Indels: 12
0.89 0.10 0.02
Matches are distributed among these distances:
771 6 0.01
772 269 0.39
773 135 0.19
774 288 0.41
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (772 bp):
ACCAGCACATGCTCGAGCCCAGCAAGTGCTACCGCAACCCTCGGTCCGATCTGAACTTAGACTGG
GAATGAACTTCATATGCCTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
CGTACGGGCGCTCAACCGACCAGAGGGACAGGATACGCAAGCCAGGGATCGACCAGGTCCCCCTC
TACGTGCTACCGATCCTGCTACCACAAACCTCGGCCCGGCTCGATCTTAGACTAGGAATGAACTC
CGTATGCCGAAGCCAACCGACGAAACGAACGGGCGAGCGGACAGGCACTAAACCGGCCAGAGAGG
GGGATGCGCAAGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACAACTTCATATTTCTACC
ATGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCATGTGAAGTT
TCATGGCAAGACACTCATTTTCTATTTTTCAAGATTTTCAAAACATTTTACGATTCGAGATTTTT
TAAAATTTTCTCAGAACGAGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGG
CACGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGT
GACCCCATTTCAGACAATTTAATGGCTATAGGCAGCAAACCTGTAAAATCTCAAATGCTGTTTAA
GGGGGTATGAGTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
Found at i:15975356 original size:26 final size:26
Alignment explanation
Indices: 15975320--15975372 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15975310 CCGGTCCGAT
15975320 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
15975346 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
15975372 C
1 C
15975373 CTAAGTCAGC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:15976250 original size:25 final size:26
Alignment explanation
Indices: 15976201--15976252 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
15976191 CTCGTCTGAT
*
15976201 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15976227 CTTAGACTGGG-ATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15976252 C
1 C
15976253 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 14 0.56
26 11 0.44
ACGTcount: A:0.25, C:0.19, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15976678 original size:888 final size:887
Alignment explanation
Indices: 15974373--15978004 Score: 4921
Period size: 889 Copynumber: 4.1 Consensus size: 887
15974363 AGGGCCAAGT
* * * *
15974373 ACCAGCACATGCCTGAGCCCAGCATGTGCTACCGTAACCCTTGGTCCAGTCTGATCTTAGACTGG
1 ACCAGCACATGCC-GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGG
* *
15974438 GAATGAACTTCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAG
65 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * *
15974503 CGTACGGGCGCTCAGTCGACCAGAGGGACAGGATGCGCAAGCCAGGGATCGACCGAGG-CCCCCT
130 CGTGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGCGCAAGCCAGGGATCGACCG-GGTCCCCAT
* * ** * **
15974567 CTACGTGCTACCGATCCTGCTGCCACAACCCTTGGTCCGATCTGATCTTAGACTGCTAATGAACT
194 CTACGTGCTACTGATCCTGCTGCTACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACT
* * * **
15974632 CCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGTGGGCAGGCACTAAACCGGCCAGAGAG
259 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAG
* * * *
15974697 GCGGGATGCGTAAGCTGTGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTG
324 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
15974762 CCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAG
389 CCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAG
* ** *
15974827 TTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGATTCGAGATT
454 TTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGGATT
* * *
15974892 TTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTTT
519 TTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
** * * * * *
15974957 TGGTGTGCACAAAACAATTCAGCTAAAAACTCAAAGTTTACAAGATTTTGTGACCATTTGAAAAA
584 TGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAA
* * * * *
15975022 AGTGACCCCATTTCAGACAATTTAATGGCTATTGGCAGCAAACCTGTAAAATCTGAAATGCTGTT
649 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * * *
15975087 TAAGGGGGTATGATTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
714 TAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* *
15975152 CACCCATCGCACATCATGTGCGCACACCCCTCCACGGCCGCCCCGATCATCGGAACCCCAATGCC
778 CACCCATCGCACATCATGTGCGCACA-CCC-CCTCGGCCCCCCCGATCATCGGAACCCCAATGCC
* * * * *
15975217 GTCGGTCAGGTTTTCCGACAATGGTGTCCCGACGAAGAAAAATGCGGC
841 G-CCGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACAGC
* * *
15975265 ACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGG
1 ACCAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGG
* * **
15975330 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAGCGTACGAAACGAG
65 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * *
15975395 CGTGAGGGCGCTCAGCCGACCAGAGGGGCAGGATGCGTAAGCCGGGGATCGACCGAGTCCCCATC
130 CGTGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGCGCAAGCCAGGGATCGACCGGGTCCCCATC
15975460 TACGTG---CTG---C--C-G---CAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTC
195 TACGTGCTACTGATCCTGCTGCTACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTC
* * * *
15975513 CGTATGCCTAAGGCAACCGGCGAAACGAGCGAGCGAGCGGGCGGGCGGGCACTACGCCGACCAAA
260 CGTATGCCTAAGCCAACCGACGAAACGAGC--G-G-GCGGGCGGGCGGGCACTACGCCGGCCAGA
* *
15975578 GAGGCGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
321 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
** *
15975643 CTGCTGTGCCAATGCCATTTTTCTGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
386 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * *
15975708 AAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGT
451 AAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGG
*
15975773 A-TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTT
516 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
15975837 TTTTGGGCATGCCCAAAAAAATTCAACTAAGAACTCGAAGTGTACAATATTTTGTGACAATTTGA
581 TGTT-GGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGA
* * *
15975902 AAAAGGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATAC
645 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * *
15975967 TCTTTAAGGAGGTGTGAGTTCTCGAGATTTGGTGAGGTATAGGAGGCCAATATAAGGGCCAAGTA
710 TCTTTAAGG-GGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
15976032 CCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGTCGGAGCCCCAATG
774 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCCGATCATCGGAACCCCAATG
* * ** * *
15976096 CTGCCAGTCAGGTTCTCTGGTGATGGTGTCCCGACGAAGAAAAATGCGGC
839 CCGCC-GTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACAGC
* * *
15976146 ACCAGCACATGCTCGAGCCGAGCACGTGCTGCTGCAACCCTCGGTCTC-GTCTGATCTTAGACTG
1 ACCAGCACATGC-CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC-CGGTCTGATCTTAGACTG
* *
15976210 GGAATGAAC-TCTGTATGCTTAGACTGGG-ATGAACTCCGTATGCCTAAGTCAACACATGAAACG
64 GGAATGAACTTC-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * ** * * *
15976273 AGCGTGCGGGCGTTCAGCC-AGCCAGAGGGGCGGGATATGCAAGCCGGGGATCGGCTGGGTCCCC
128 AGCGTGCGGGCGCTCAGCCGA-CCAGAGGGGCAGGATGCGCAAGCCAGGGATCGACCGGGTCCCC
* **
15976337 ATCTACGTGCTATTGATCCTGCTGCTACAACCCTCAGTGTGATCCGATCTTAGACTGGGAATGAA
192 ATCTACGTGCTACTGATCCTGCTGCTACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAA
* * * * * * *
15976402 CTCTGTATGCCAAAGCCAACCGTCGAAACGAGATGGGCGGACGAGCGGGCACTACGCCTGCCAGA
257 CTCCGTATGCCTAAGCCAACCGACGAAACGAG-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGA
*
15976467 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG-CGGTTTAGGCACATCTTCATATTT
321 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
15976531 CTGCCATTCCAATGCCATTTTTCTGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTG
386 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * *
15976596 AAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACTATTCGGG
451 AAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGG
* * *
15976661 ATTTTTTAAAA-TTTTTCAGAAGAAGTTTTGGCCCCAAACTTAGTAGACTTGATCCTTGTATTTT
516 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
15976725 TGTTGGCATGCACAAAAAACTTC-AGTGAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
581 TGTTGGCATGCACAAAAAAATTCAACT-AAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGA
* * * *
15976789 AAAAAGTGTGCCCATTTTAGACACTTTAATGCCTACTGGCAGCAAACCTGTAATATCTCAAATGC
645 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
15976854 TCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATACAAGGGCCAAGTA
710 TCTTTAAGGGG-TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
15976919 CCAACACCCATCGCACATGATGTGCGCACACCCCCTCGGCCCCCCCGATCACCGGAACCCCAATG
774 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCCGATCATCGGAACCCCAATG
* * **
15976984 TCGCCGATCAGGTTCTCCGACGATGGTGTCCTGGTGAAGAAAAATACAGC
839 CCGCCG-TCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACAGC
* * *
15977034 ACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTTGGTCCGGTCTGAT-TTGACACTG
1 ACCAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTT-AGACTG
* *
15977098 GGAATGAACTTCGTATGCTTAGA-TGGAGAATGAACTCCGTATGCCTAAGTCATCCCACGAAATG
64 GGAATGAACTTCGTATGCTTAGACTGG-GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * ** * *
15977162 AGCGTGCGGGCGCAT-AGCCGGCCAGAAGGGTGGGATGCGCAAGCCAGGGATCGATCAGGTCCCC
128 AGCGTGCGGGCGC-TCAGCCGACCAGAGGGGCAGGATGCGCAAGCCAGGGATCGACCGGGTCCCC
* * * * * ** ** *
15977226 CTCTGCGTGCTGCTGATCTTGCTACTGTAACCCTTGGTCC-AGTCTGATCTTAGACTGGGAATGA
192 ATCTACGTGCTACTGATCCTGCTGCTACAACCCTCAGTCCGA-TCCGATCTTAGACTGGGAATGA
* * * * * * *
15977290 ACTTCGAATGCCTAAGCCGACCAACGAAACCAGCGGGCGGGCGGGCGGGTACTATGCCGGCCAGA
256 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGA
15977355 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
321 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
15977420 CTACCATGCCAATGCCATTTTTCTGGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCATGTG
386 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * * *
15977485 AAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAAGGTTCGGG
451 AAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGG
* *
15977550 ATTTTTTAAAACTTTTACAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
516 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
15977615 TGTTGGCATGCA-AAAAAATATTTAGCTAAAAACTCGAAGCGTGCAAGATTTTGTGACAATTTGA
581 TGTTGGCATGCACAAAAAA-ATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGA
* *
15977679 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCGAACCTGT-AAATCTCAAATGC
645 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
15977743 TCTTTAAGGGAGTGTGAGTTCTCAAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTA
710 TCTTTAAGGG-GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* ** *
15977808 CCAGCACCCATCGCACATAATGTGCGCACACCCCCTCAACCCCCCCGATCGTCGGAACCCCAGA-
774 CCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCCGATCATCGGAACCCCA-AT
* * * *
15977872 ACCGTCTGTCAGGTTCTCCGATGATAGTGTCCC-AGCGAAGAAAAATACAGC
838 GCCG-CCGTCAGGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATACAGC
* * * * *
15977923 ACCAGCACATGCCTGAGCCCAGCAAGTGCTGCCGCAACCCTCGATTCGGTCCGATTTTAGACTGG
1 ACCAGCACATGCC-GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGG
*
15977988 GAATGAACTCCGTATGC
65 GAATGAACTTCGTATGC
15978005 CTAAGCCAAC
Statistics
Matches: 2424, Mismatches: 266, Indels: 103
0.87 0.10 0.04
Matches are distributed among these distances:
879 1 0.00
880 159 0.07
881 147 0.06
882 4 0.00
883 73 0.03
884 401 0.17
886 6 0.00
887 205 0.08
888 401 0.17
889 630 0.26
890 151 0.06
891 3 0.00
892 241 0.10
893 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (887 bp):
ACCAGCACATGCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG
AATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
GTGCGGGCGCTCAGCCGACCAGAGGGGCAGGATGCGCAAGCCAGGGATCGACCGGGTCCCCATCT
ACGTGCTACTGATCCTGCTGCTACAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCC
GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC
ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
TCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGGATTTT
TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
GCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAG
TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
AGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
CCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCCGATCATCGGAACCCCAATGCCGCCGT
CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACAGC
Found at i:15980228 original size:26 final size:26
Alignment explanation
Indices: 15980192--15980244 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15980182 GCGGTTCGAT
* *
15980192 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15980218 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15980244 C
1 C
15980245 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15981001 original size:4 final size:4
Alignment explanation
Indices: 15980992--15981017 Score: 52
Period size: 4 Copynumber: 6.5 Consensus size: 4
15980982 CATGAAACGA
15980992 GCGG GCGG GCGG GCGG GCGG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GC
15981018 ACTACGTCAG
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 22 1.00
ACGTcount: A:0.00, C:0.27, G:0.73, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:15982421 original size:26 final size:26
Alignment explanation
Indices: 15982384--15982435 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
15982374 CGGTTCGATT
* *
15982384 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTAGGAATGAACTCCGTATGC
15982410 TTAGACTAGGAATGAACTCCGTATGC
1 TTAGACTAGGAATGAACTCCGTATGC
15982436 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCGTATGC
Found at i:15982745 original size:731 final size:729
Alignment explanation
Indices: 15979915--15983174 Score: 4683
Period size: 734 Copynumber: 4.5 Consensus size: 729
15979905 GTAAATTCAT
* * * *
15979915 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTGAAAGGGGTGCGAGTTCT
1 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
15979980 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGCCCAAGTACCACCACCCATCGCACATCATG
66 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * ** * *
15980045 TGCGTACATCCCCTGGCCCCCCCGTTCGCCGGAACCCCAATGTCGTCGATCAGGTTCTCCAGTGA
131 TGCGTACACCCCCCGG-CCCCCCGATCGTAGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGA
* * ** * * * * *
15980110 TCGTGACCCGGTGAAGAAAAATGCGGCACTAGCACATGCTTGAGCCCAGCATGTGCTGTCGCAAC
195 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAAC
* * * *
15980175 CCTAGGTGCGGTTCGATCTTAGATTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCG
260 CCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
15980240 TATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGGGCGGGCACTACGTCAGCTAGAGAGGCG
325 TATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCG
* * *
15980305 GGATGCACAAACCATGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTATTA
390 GGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCA
15980370 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTT
455 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTT
*
15980435 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTGTTACGGTTCGGGATTTTT
520 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTGTTACGGTTCAGGATTTTT
*
15980500 TAGAATATTTTCAGATGGAGTTTTGGCCCCAAACTTGGTATACGGGATCCTTGTATTTTTGTTGG
585 TAGAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGGTATACGGGATCCTTGTATTTTTGTTGG
15980565 CATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGT
650 CATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGT
15980630 GTCCCCATTTCAGAC
715 GTCCCCATTTCAGAC
* * * *
15980645 ACTTGAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTAACTTCT
1 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * **
15980710 CGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCATGTATGAGCACCCATCGCACATC--G
66 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * * ** * * *
15980773 TGTGTGCACCCCCCGGCCCCCCCATCGTTGAAACCATAATGCCGTCAGTCAAGTT-TCCGGTGAT
131 TGCGTACACCCCCCGGCCCCCCGATCGTAGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGAT
* * * * * **
15980837 GGTGTCCCAACGAAGAAAAAGACGGCACCAGCACATGCCCGAGCCTAGCATATGCTGCCGTAACC
196 GGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAACC
* * * ** * *
15980902 CTCGGTCTGGTCTC-ATTTTACACTTTGAATGAACTCCGTATGCTTATACTTGGAATGAACTCCG
261 CTCGGTCCGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
*
15980966 TATGCCTAAGTCAACCCATGAAACGAGCGGGCGGGCGGGCGGGCGGGCGGGCACTACGTCAGCCA
325 TATGCCTAAGTCAACCCACGAAACGA--------GCGGGCGGGCGGGCGGGCACTACGTCAGCCA
* * *
15981031 AAGAGGCGGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTATGAACATCTTCATAT
382 GAGAGGCGGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
** *
15981096 TTCCGTCATGCCAATGCCATTTTTCTGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAG
447 TTCTATCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAG
*
15981161 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCA
512 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTGTTACGGTTCA
*
15981226 GGATTTTTTAGAATTTTTTTAGATGGAGTTTTGGCCCCAAACTTGGTATACGGGATCCTTGTATT
577 GGATTTTTTAGAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGGTATACGGGATCCTTGTATT
* * *
15981291 TTTGTTGGTATGCACAAAAAAATTCAGCTAAAAAATCAAAATGTATAAGATTTTGTGACCATTTG
642 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTATAAGATTTTGTGACCATTTG
15981356 AAAAAAGTGTCCCCATTTCAGAC
707 AAAAAAGTGTCCCCATTTCAGAC
15981379 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
1 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* ** * *
15981444 CGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTATGAGCACCCATCGCGCATCGTG
66 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * *
15981509 TGCG--CACCCCCCGGCCCTCCC-ATCGCAAGAACCCCAATGCCGTCAGTCAGGTT-TCCGGTGA
131 TGCGTACACCCCCCGGCCC-CCCGATCGTAGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGA
* ** * **
15981570 TGGTGTCCCGACGAAGAAAACTGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTACCTTAAC
195 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAAC
* **
15981635 CCTCGGTCC-GTTCTGATCTTACACTTTGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
260 CCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
* * * * * *
15981699 GTATGCCTAAGTCAACTCATGAAACGAGCGGGCGGGCAGGCGGGCACAACGCCGGCCAGAGAGGC
324 GTATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGGC
* *
15981764 GGGAAGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATT
389 GGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATC
* * *
15981829 GTACCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTT
454 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTT
* * *
15981894 TTATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTGTTACGGTTC-GAGATTT
519 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTGTTACGGTTCAG-GATTT
*
15981958 TTTAGAATTTTTTCAGATGGAGTTTT-GCCCCAAACTTGGTATACGGGATCCTTGTATTTTTTTT
583 TTTAGAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGGTATACGGGATCCTTGTATTTTTGTT
* * *
15982022 GGCGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTATAAGACTTTGTGACCATTTGAAAAAA
648 GGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAA
15982087 GTGTCCCCATTTCAGAC
713 GTGTCCCCATTTCAGAC
* * * * *
15982104 ACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTAAAATGTTGTTGAAGGGGGTGTGAGTTCT
1 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
15982169 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGTCCAAGTACCAGCACCCATCGCACATCATG
66 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
*
15982234 TGCGTACACCCCCCATGGCACCCCCGTTCGTAGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGT
131 TGCGTACACCCCCC--GGC-CCCCCGATCGTAGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGT
* * * *
15982299 GATGGTGTCCCGACGAAGAAAAATACGACATCAGCAAATGCTCGAGCCCAGCATGTGCTGTCACA
193 GATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACA
* * * *
15982364 ACCCTCTGTCCGGTTCGATTTTAGACTGGGAATGAACTCTGTATGCTTAGACTAGGAATGAACTC
258 ACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * ** *
15982429 CGTATGCCTAAGTCAACCTACGAAACGAGCGTGCGGGCGGGCAAGCACTACGTCTGCCAGAGAGG
323 CGTATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGG
* * *
15982494 CAGGATGCACAAACCGTGGATCGATAGGGTGGTAGGT-GGTTTAGGCATATCTTCATATTTCTGT
388 CGGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAT
*
15982558 CATGCCAATGCCATTTTTCTGGCATGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGT
453 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGT
*
15982623 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTGTTACGGTTTAGGATTT
518 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTGTTACGGTTCAGGATTT
* * * * * **
15982688 TTTATAATTTTTTCAGAAGGAGTTTTGGACCCAAACTTCGTAGACATGATCCTTGTATTTTTGTT
583 TTTAGAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGGTATACGGGATCCTTGTATTTTTGTT
* * * *
15982753 GGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAGCATTTGAAAAAA
648 GGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAA
*
15982818 GTGTCCCCATTTAAGAC
713 GTGTCCCCATTTCAGAC
* *
15982835 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGAGTGTGAGTTCT
1 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
15982900 CGAGGTTTGATGAGGAATGGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
66 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
15982965 TGCG--CA---CAC--CCCCCCGATCGCT-GGAACCCCAATGTCGTTGGTCAGGTTCTCCGGCGA
131 TGCGTACACCCCCCGGCCCCCCGATCG-TAGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGA
* *** **
15983022 TGGTGTCCCGGCGAAGAAAAATGTAGCACCAGTGCATGCTCGAGCCCAGCATGTGCTGCCACAAC
195 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAAC
*
15983087 CCTCGGTCC-GATCTGATCTTAGACTGGGAATGAACTCCGTAAT-CTTAGACTGGGAATGAACTC
260 CCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGT-ATGCTTAGACTGGGAATGAACTC
**
15983150 TATATGCCTAAGTCAACCCACGAAA
323 CGTATGCCTAAGTCAACCCACGAAA
15983175 TAAGCATGTG
Statistics
Matches: 2268, Mismatches: 234, Indels: 65
0.88 0.09 0.03
Matches are distributed among these distances:
720 3 0.00
721 170 0.07
722 4 0.00
725 237 0.10
726 371 0.16
727 38 0.02
728 13 0.01
729 8 0.00
730 310 0.14
731 437 0.19
732 6 0.00
733 2 0.00
734 662 0.29
735 3 0.00
736 4 0.00
ACGTcount: A:0.26, C:0.22, G:0.24, T:0.27
Consensus pattern (729 bp):
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGTACACCCCCCGGCCCCCCGATCGTAGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGAT
GGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAACC
CTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
ATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGG
GATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCAT
GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTC
ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTGTTACGGTTCAGGATTTTTT
AGAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGGTATACGGGATCCTTGTATTTTTGTTGGC
ATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTG
TCCCCATTTCAGAC
Found at i:15984912 original size:895 final size:885
Alignment explanation
Indices: 15982409--15985764 Score: 4350
Period size: 884 Copynumber: 3.8 Consensus size: 885
15982399 ACTCTGTATG
* * * * **
15982409 CTTAGACTA-GGAATGAACTCCGTATGCCTAAGTCAACCTACGAAACGAGCGTGCGGGCGGGCAA
1 CTTAGAC-AGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGG
*
15982473 GCACTACGTCTGCCAGAGAGGCAGGATGCACAAACCGTGGATCGATAGGGTGGTAGGT-GGTTTA
65 GCACTACGTCGGCCAGAGAGGCAGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
15982537 GGCATATCTTCATATTTCTGTCATGCCAATGCCATTTTTCTGGCATGTAAATTCATACAATGGTC
130 GGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTC
*
15982602 CCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
195 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* ** * *
15982667 ACTTGTTACGGTTTAGGATTTTTTATAATTTTTTCAGAAGGAGTTTTGG-ACCCAAACTTCGTAG
260 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCA-CCAAACTTGGTAG
* *
15982731 ACATGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAG
324 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
15982796 ATTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACC
389 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * *
15982861 TGTAAAATCTCAAATACTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGAATGGGGGGCC
454 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
15982926 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGATCG--C--T
519 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCGCCCGAT
* * * **
15982987 -G---GAACCCCAATGTCGTTGGTCAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAATGTAG
584 CGCCAGAACCCCAATGCCGTCGGTTAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAATGCGG
** * * * *
15983048 CACCAGTGCATGCTCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCTGATCTTAGACTG
649 CACCAGCACATGCTCGAGCCCAGCATGTGCT-ACGCAACCCTCGGTCCGGTCCGATCTTAGACTG
* *
15983113 GGAATGAACTCCGTAATCTTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAATAA
713 GGAATGAACTCCGT-ATCTTAGACTGGGAATGAACTC-CTATGCCTAAGTCAACCCACGAAATGA
* * * * *
15983178 GCATGTGGGCGTTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCCAGGTCCTCCT
776 GCGTGCGGGCGTTCAGCCGGCCAGAGGGGCATGATGCGCAAGCCGGGGATCGGCTAGGTCCCCCT
* * * * * *
15983243 CTACGTGCTGCCGATCCTGCTGCTGCAACCCTCTATTCGGTCCGAT
841 CTGCGTGCTGCCGATCCTGCTACCGCAACCCTC-AGTCCGTCTGAT
* * *
15983289 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AGCGGGCGGGCGGGCTGACGGG
1 CTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC--G--GACGGG
* * *
15983353 CTGGCACTACGTCGGCCAGAGAGGCAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGTCGGCCAGAGAGGCAGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
15983418 TTAGGTACATCTTCATATTTCTGCCATGCCAATGCCATTTCTCAGGCTTGTAAATTCATACAATG
127 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
* *
15983483 GTCCCTTATGCCTTCATGTGAAGTTTCATGGCAAGGCGACTCGTTTTCTATTTTTCATGATTTTT
192 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * * *
15983548 GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCCAAACTTAGT
257 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCACCAAACTTGGT
* * * * * *
15983613 AGATGTGATCCTTGTATTTTTTTTGGCGTGCATAAAAAAATTCAACTAAAAACGCGAAGTGTACA
322 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * * *
15983678 ACATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACATTTTAATGGCTACTGACAGCAAA
387 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
15983743 CCAGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGC
452 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
15983808 CCATTATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGCACACCCCCTCGACCTCGCC
517 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGA-C-CGCC
* * * ** * *
15983873 CGATCGTCGGAACCCCAATGCCATCGGTTAGGTTCTCCGATGATGGTGTCCTGGCGAATAAAAAT
580 CGATCGCCAGAACCCCAATGCCGTCGGTTAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAAT
* * *
15983938 GCGGCACCAGCACATGC-CTGAGCCTAGCATGTGCTATCGCAACCCTCGGTCTGGTCCGATATTA
645 GCGGCACCAGCACATGCTC-GAGCCCAGCATGTGCTA-CGCAACCCTCGGTCCGGTCCGATCTTA
* * *
15984002 TACTTGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
708 GACTGGGAATGAACTCCGTAT-CTTAGACTGGGAATGAACTCC-TATGCCTAAGTCAACCCACGA
** * * * *
15984067 AATGAGCGTGCGTACGCTCAGCCGGCCAGAGGGGCATAATGCACAAGCCGGGGATCGGCTTGGTC
771 AATGAGCGTGCGGGCGTTCAGCCGGCCAGAGGGGCATGATGCGCAAGCCGGGGATCGGCTAGGTC
* * * * * *
15984132 CCCCTCTGCGTGCTGTCGATCCTGCTATCGCAATCATCGGCCCAGTCTGAT
836 CCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCC-GTCTGAT
* *
15984183 CTTAGACAGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGACGGGCGGG
1 CTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGGG
* * *
15984248 CACTAC-TCCGGCCAGAGAGGCGGGATGCACAAGCCGTGGATCGATAGGGTAGTAGGTGGGTTTA
66 CACTACGT-CGGCCAGAGAGGCAGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * *
15984312 GGCACAACTTCATTATTTCTAACCATGCCCAAAAG-CATCTTTTCTGGCTTGTAAA-TCATACAA
130 GGCACATCTTCA-TATTTCT-GCCATG-CC-AATGCCAT-TTTTCTGGCTTGTAAATTCATACAA
*
15984375 -GGTCCCATTAAGCCTTCATGTGAAGTTTCATGGCAAACGACGACTCGTTTTCTA-TTTTCACCG
190 TGGTCCC-TTAAGCCTTCATGTGAAGTTTCATGGC-AA-GACGACTCGTTTTCTATTTTTCA-TG
* *
15984438 A-TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCAGCAAA
251 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCACCAAA
*
15984502 CTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAGTTCAGCTAAAAACTCGAA
316 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA-TTCAGCTAAAAACTCGAA
15984567 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
380 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
*
15984632 CAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
445 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* *
15984697 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATTTGCTCACACCCCCCCGA
510 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGA
* *
15984762 CCGCCCTGATCGCCAGAACCCCAATGTCGTCGGTTAGGTTCTCCGGCGATGGTGTCCCGGCAAAG
575 CCGCCC-GATCGCCAGAACCCCAATGCCGTCGGTTAGGTTCTCCGGCGATGGTGTCCCGGCGAAG
* * * * * *
15984827 AAAAATGCTGCACCAGCACATTCTGGAGCCCAGTATGTGCTACGGCAACCCTCGGTCTGGTCCAA
639 AAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTAC-GCAACCCTCGGTCCGGTCCGA
* *
15984892 TCTTACACTGGGAATGAA---C---TC-----C---G--T--A---C---GCCTAAGTCAAGCCA
703 TCTTAGACTGGGAATGAACTCCGTATCTTAGACTGGGAATGAACTCCTATGCCTAAGTCAACCCA
* * * * *
15984933 CGAAACGAGCGTACGGGCGTTCAGTCGGCCAGAGGGGC-TGGATGCGCAAGTCGGGGATC-GATC
768 CGAAATGAGCGTGCGGGCGTTCAGCCGGCCAGAGGGGCAT-GATGCGCAAGCCGGGGATCGGCT-
* * *
15984996 GGGTCCCCATCAGCGTGCTGCCGATCCTGCTACCGTC-ACCCTCAGTCCGATCTGAT
831 AGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCG-CAACCCTCAGTCCG-TCTGAT
* *
15985052 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAA--A-----C--A--AGCGGG
1 CTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGGG
* ** * * *
15985105 CACTACGCCGGCCAGAGAGGGGGGATGCGCAAACAGTGGCTCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGTCGGCCAGAGAGGCAGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
15985170 GCACATCTTCATATTTCGGCCATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAATGGTCC
131 GCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCC
* ** *
15985235 CTTAAGCATTCATGTGAAGTTTCATACCAAGACGACTCGTTTTCTATTTTTCATGATGTTTGAAA
196 CTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* * * * * *
15985300 CTTTTTACGGTTCGGGATTTTATAAAATTTTTTCAGAAGAAGTTTTCGTACCAAACGTGGTAGAT
261 CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCACCAAACTTGGTAGAC
* *
15985365 GTGATCATTGTATTTTTGTTGGCATGCGCAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
326 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
15985430 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTA
391 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
15985495 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGTGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
456 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* ** * *
15985560 TATATA-GGCCAAGTACCAGCACCCATCGCACATCATGT--GCATACAACCTCGACCCCCCCGAT
521 TATA-AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGA-CCGCCCGAT
* * * *
15985622 CGCTAGAACCCCAATGCCGCCGGTTAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGG
584 CGCCAGAACCCCAATGCCGTCGGTTAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAATGCGG
* * *
15985687 CACCAGCACATGCTCGAGCCCAGCATGTGCTGCTGTAACCCTCGGTCCGGTTCGATCTTAGACTG
649 CACCAGCACATGCTCGAGCCCAGCATGTGCTAC-GCAACCCTCGGTCCGGTCCGATCTTAGACTG
*
15985752 GAAATGAACTCCG
713 GGAATGAACTCCG
15985765 GGCATTCAGT
Statistics
Matches: 2181, Mismatches: 242, Indels: 132
0.85 0.09 0.05
Matches are distributed among these distances:
850 132 0.06
851 5 0.00
852 208 0.10
853 124 0.06
854 37 0.02
855 11 0.01
856 6 0.00
857 72 0.03
859 1 0.00
861 1 0.00
866 1 0.00
868 7 0.00
869 142 0.07
870 1 0.00
873 1 0.00
876 1 0.00
878 1 0.00
879 8 0.00
880 39 0.02
881 1 0.00
883 62 0.03
884 410 0.19
886 2 0.00
888 2 0.00
889 1 0.00
890 2 0.00
891 79 0.04
892 8 0.00
893 16 0.01
894 329 0.15
895 256 0.12
896 215 0.10
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (885 bp):
CTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGGG
CACTACGTCGGCCAGAGAGGCAGGATGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCACCAAACTTGGTAGAC
GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCGCCCGATCG
CCAGAACCCCAATGCCGTCGGTTAGGTTCTCCGGCGATGGTGTCCCGGCGAAGAAAAATGCGGCA
CCAGCACATGCTCGAGCCCAGCATGTGCTACGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGA
ATGAACTCCGTATCTTAGACTGGGAATGAACTCCTATGCCTAAGTCAACCCACGAAATGAGCGTG
CGGGCGTTCAGCCGGCCAGAGGGGCATGATGCGCAAGCCGGGGATCGGCTAGGTCCCCCTCTGCG
TGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGTCTGAT
Found at i:15986595 original size:26 final size:26
Alignment explanation
Indices: 15986559--15986611 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
15986549 CTGGTCTGAT
*
15986559 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
15986585 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
15986611 C
1 C
15986612 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:15989205 original size:26 final size:26
Alignment explanation
Indices: 15989169--15989224 Score: 76
Period size: 26 Copynumber: 2.2 Consensus size: 26
15989159 GCGGTCCGAT
* * *
15989169 CTTAGATTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATCAACTCCATATG
*
15989195 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCATATG
15989221 CTTA
1 CTTA
15989225 AGTTAACCCA
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.29, C:0.18, G:0.21, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCATATG
Found at i:15989933 original size:888 final size:884
Alignment explanation
Indices: 15987657--15990995 Score: 3961
Period size: 885 Copynumber: 3.7 Consensus size: 884
15987647 TACGTCGCCC
* * *
15987657 AGAGAGGCGGGATGCACAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATA
1 AGAGAGGCGGGATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* * *
15987722 TTCCTACCATGCCAATGCCATTTTTCTGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
66 TTTCTACCATGCCAATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* *
15987787 GTGAAGTTTCATGCCAAGACAACTCGTTTTCTATTTTTC-TCAATTTTTGAAACTTTTTACGGTT
131 GTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAT-GATTTTTGAAACTTTTTACGGTT
* * * * ** *
15987851 CGGGATTTTTTAAAATCTTTTCAGAAGGAGTTTCAGCCCCAAACTTGGTAGACATGATCCTTGTA
195 CAGAATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* *
15987916 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTCTACAAGATTTTGTGACCATT
260 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATT
*
15987981 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAA
325 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* * * *
15988046 TGCTCTTTAAGGGGGTGTGAGTTCTTGTGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAA
390 TGCTCATTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * * * *
15988111 GAACCAGCACCTATCGCAAATCTTGTGCGCACACCCCCCGACGCCCCCGATCGCCGAAACCCCAA
455 GTACCAGCACCTATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGAAACCCCAA
* ** ** * * *
15988176 TGTCGCCGGTCAATTTCTCCGACGATGGCATCCTGGCGAAGAAAAATGCGATACCAGCACATGCC
520 TGTCGCCAGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGCGACACCAGCACATGCC
* * * *
15988241 CGAGCCCAGCAAGTG-TAGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTTTG
585 CGAGACCAGCATGTGCT-GCCGCAACCCTCGGT-CGATCCGATCTTAGACTGGGAATGAACTCTG
* *
15988305 TATGCTTAGATTGGGAATGAA-AGCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
648 TATGCTTAGA-TGGGAATCAACA-CCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGC
* * * ** * * *
15988369 TCAGCCGGCCAGAGGGGCAGGATGCG-TAAGTCGGGGATCGACCGATTCCCCCTTTACGTGCTGC
711 TCATCCGGCCAAAGGGGC-GGATGCGCT-AGCCAAGGATCGGCCGAGTCCCCCTTTGCGTGCTGC
* * *
15988433 TGATCCTACTATCGTAACCCTCG-ATCTGGTCCGATCTTAGACTTGGAATGAACTCCGTATGCCT
774 TGATCCTACTACCGCAACCCTCGTA-CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
* *
15988497 AAGCCAACCGACGAAACGAGCGGGC-G-GGCGGGCACTACGCCGACC
838 AAGCCAACCGACGAAACGAGCGGGCGGCGGCGGGCACTACGCCGGCT
* * * *
15988542 AGAAAGGTGGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGCGTTTAGGCACATCTTCATA
1 AGAGAGGCGGGATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* * * *
15988607 TTTCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCTT
66 TTTCTACCATGCCAATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* * *
15988672 GTGAAGTTTCATGGCAAGACAACTCGTTTTCTCTTTTTCACGATTTTTGAAACATTTTACGGTTC
131 GTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC
*
15988737 AGGAA-TTTTTAAAATTATTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
196 A-GAATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* *
15988801 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATT
260 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATT
* *
15988866 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATTTGAAA
325 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
15988931 TGCT-ATTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
390 TGCTCA-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
*
15988995 AGTACCAGCAACC-ATCGCACATCATGTGCGC-CTACCCCCCCGGCCCCCCCGATCGCCGGAACC
454 AGTACCAGC-ACCTATCGCACATCATGTGCGCAC-A-CCCCCCGGCCCCCCCGATCGCCGAAACC
** * * * * * *
15989058 CCAATACCGCCAGTCAGGTTCTCTGGCGATGGTTTCCCGATGAAGAAAAATGTGGCACCAGCACA
516 CCAATGTCGCCAGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGCGACACCAGCACA
* *
15989123 TGCCCGA-ACCATGCATGTGCTGCCGCAACCCTCGGTGCGGTCCGATCTTAGATTGGGAATGAAC
581 TGCCCGAGACCA-GCATGTGCTGCCGCAACCCTCGGT-CGATCCGATCTTAGACTGGGAATGAAC
* * * * *
15989187 TCTATATGCTTAGACTGGGAATCAACTCCGTATGCTTAAGTTAACCCACGAAATGAGCGTACGGG
644 TCTGTATGCTTAGA-TGGGAATCAACACCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
* *
15989252 TGCTCATCCGGCCAAAGGGGCGGGATGCGCTAGCCAAGGATCGGCCGGGTCCCCCTTTGCGTGCT
708 CGCTCATCCGGCCAAAGGGGC-GGATGCGCTAGCCAAGGATCGGCCGAGTCCCCCTTTGCGTGCT
* * * * *
15989317 GCCGATCCTACT-CCACAACCCTCAGTAC-GGTTCGATCTTGGACTGGGAATGAACTACGTATGC
772 GCTGATCCTACTACCGCAACCCTC-GTACTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
*
15989380 CTAAGCCAACCGACGAAACGAGTGGGCGGACGGCGGGCACTACGCCGGCT
836 CTAAGCCAACCGACGAAACGAGCGGGCGG-CGGCGGGCACTACGCCGGCT
* *
15989430 AGAGAGGCGAGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
1 AGAGAGGCGGGATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
* * * * *
15989495 TTTCTGCCTTGCCAATGCCATTTTTCTCACTTGTAAATTCATACAATGGTCCCATATGCCTTCAT
66 TTTCTACCATGCCAATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
* * *
15989560 GTGAAGTTTCCTGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTC
131 GTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC
* *
15989625 AAAATTTTTTAAAATTTTTTCAGAAGGATTTTTGTCCCCAAACTTGGTAGACGTGATCCTTGTAT
196 AGAATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-
* * *
15989690 TTTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACTCAAAGTGTACAAGATTTTGTTACCAT
260 -TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCAT
* ** *
15989755 TTGAAAAAAGTATCCAAATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAA
324 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
*
15989820 ATGCTCATTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCA
389 ATGCTCATTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* **
15989885 AGTACCAGCACCTATCGCACATCATGAGCGCACACCCCCCGG-CCCCCCGATCATCGAAACCCCA
454 AGTACCAGCACCTATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGAAACCCCA
* *
15989949 ATGTTGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGC-AGCACCAGCACATG
519 ATGTCGCCAGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGCGA-CACCAGCACATG
* *** * * * * *
15990013 CTCGAGGGTAGCATGTGCTACCACAATCCTCGGTTCGATCTGATCTTAGACTGGGAATGAACTCC
583 CCCGAGACCAGCATGTGCTGCCGCAACCCTCGG-TCGATCCGATCTTAGACTGGGAATGAACTCT
* ** * * * * * * *** *
15990078 GTATGCCTA-A-GTCAACCCACGAAACG-A-GCGTACGGGCACTCAGCCTGCTA-GAGGGGAGGG
647 GTATGCTTAGATGGGAATCAAC--ACCGTATGCCTA-----AGTCAACC--C-ACGAAACGAGCG
* * * * ****** * * * ** * *
15990138 ATACGCAAACTGGGGATCGGTCGGGTCCATCTTTACGTATGC-TTAGACTGGGAAT-GAACTCCA
702 -TACG------GGCGCTC-ATCCGG-CCAAAGGGGCGGATGCGCTAGCCAAGG-ATCG-GC-CGA
*** * * * * * * *
15990201 -TATGCCTAAGTCCCT-CT-CTGTGTGCTGCTGATCCTGCTGCTGCAACCCTCGGT-CTGATCCG
755 GTCCCCCT--TTGCGTGCTGCTG-ATCCTACT-A-C------C-GCAACCCTC-GTACTGGTCCG
* * * * *
15990262 ATCTTAGACTGGGAATGAACTCCGTAAGCCCAAGCCAACCGACGAAATGAGCGGGTGGGCGGGTG
807 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG-CGGC-GGCG
* *
15990327 GGCACTACGTCAGCT
870 GGCACTACGCCGGCT
* * * *
15990342 AGAGAGGCGGGATGCGCAAGTCATGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTTATA
1 AGAGAGGCGGGATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
15990407 TTTCTACCATGCCAATGCCATTTTTCT-AGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
66 TTTCTACCATGCCAATGCCATTTTTCTGA-CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * ** * *
15990471 AGTGAAGTTTCATGGAAAGATGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTT
130 TGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT
** * * * *
15990536 TGGGATTTTTTCAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTA
195 CAGAATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* *
15990601 TTTTTTTTGGCATGCACAAAAAAATTCATCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATT
260 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATT
* * * *
15990666 TGAAAAATGTGTCCCCATTTCAGACACTTTAATTGCTACTTGCAGCAAAGCTGTAAAATCTCAAA
325 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* * * *
15990731 TCCTC-TTTAGGGAGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGTCCAATATAAGGGCCA
390 TGCTCATTAAGGG-GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * *
15990795 AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCCGATCGTCGGAACCCC
454 AGTACCAGCACCTATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCCGATCGCCGAAACCCC
* * * *
15990860 AATGTAG-CAGGAT-AGGTTCTCCGGCGATGGTGTCCCGGTGTAGAAAAATGTGACACCAGCACA
518 AATGTCGCCA-G-TCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGCGACACCAGCACA
* *
15990923 TGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACT
581 TGCCCGAGACCAGCATGTGCTGCCGCAACCCTCGGTC-GATCCGATCTTAGACTGGGAATGAACT
15990988 -TCGTATGC
645 CT-GTATGC
15990996 CTAAACTAAC
Statistics
Matches: 2119, Mismatches: 264, Indels: 115
0.85 0.11 0.05
Matches are distributed among these distances:
884 1 0.00
885 519 0.24
886 254 0.12
887 8 0.00
888 382 0.18
889 13 0.01
890 212 0.10
891 2 0.00
892 7 0.00
893 5 0.00
899 12 0.01
900 18 0.01
901 12 0.01
902 3 0.00
904 1 0.00
909 6 0.00
910 214 0.10
911 68 0.03
912 380 0.18
913 2 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (884 bp):
AGAGAGGCGGGATACGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
TTTCTACCATGCCAATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT
GTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC
AGAATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTT
GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
GCTCATTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
TACCAGCACCTATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGAAACCCCAAT
GTCGCCAGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGCGACACCAGCACATGCCC
GAGACCAGCATGTGCTGCCGCAACCCTCGGTCGATCCGATCTTAGACTGGGAATGAACTCTGTAT
GCTTAGATGGGAATCAACACCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCATC
CGGCCAAAGGGGCGGATGCGCTAGCCAAGGATCGGCCGAGTCCCCCTTTGCGTGCTGCTGATCCT
ACTACCGCAACCCTCGTACTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACGAGCGGGCGGCGGCGGGCACTACGCCGGCT
Found at i:15991713 original size:26 final size:26
Alignment explanation
Indices: 15991672--15991733 Score: 97
Period size: 26 Copynumber: 2.3 Consensus size: 26
15991662 ACCCTCGGTC
15991672 CAGTATGATCTTAGACTGGGAATGAACT
1 CAGTATG--CTTAGACTGGGAATGAACT
15991700 CAGTATGCTTAGACTGGGAATGAACT
1 CAGTATGCTTAGACTGGGAATGAACT
*
15991726 CCGTATGC
1 CAGTATGC
15991734 CTAAGTCAAC
Statistics
Matches: 33, Mismatches: 1, Indels: 2
0.92 0.03 0.06
Matches are distributed among these distances:
26 26 0.79
28 7 0.21
ACGTcount: A:0.29, C:0.18, G:0.26, T:0.27
Consensus pattern (26 bp):
CAGTATGCTTAGACTGGGAATGAACT
Found at i:15992593 original size:26 final size:26
Alignment explanation
Indices: 15992564--15992615 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
15992554 CCGGTCCGAT
15992564 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15992590 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15992616 TCTAAGTCAA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15993475 original size:26 final size:26
Alignment explanation
Indices: 15993432--15993484 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15993422 CCAGTCTGAT
* *
15993432 CTTAGACTGGAAAAGAACTCCGTATG
1 CTTAGAATGGAAAAGAACTCCATATG
* *
15993458 CTTAGAATGGGAATGAACTCCATATG
1 CTTAGAATGGAAAAGAACTCCATATG
15993484 C
1 C
15993485 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.34, C:0.19, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAGAATGGAAAAGAACTCCATATG
Found at i:15994358 original size:26 final size:26
Alignment explanation
Indices: 15994321--15994373 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15994311 CCAATCTGAT
*
15994321 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
*
15994347 CTTAGACAGGGAATGAAGTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
15994373 C
1 C
15994374 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.28, T:0.25
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCGTATG
Found at i:15994668 original size:889 final size:888
Alignment explanation
Indices: 15990940--15999829 Score: 11600
Period size: 889 Copynumber: 10.1 Consensus size: 888
15990930 GCCCAGCATG
* * * * * * *
15990940 TGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAACTAA
1 TGCTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** ** * ** *
15991005 CCGACGAATTGAGTAGGCGGGCGGGCGAGCGCTCGCCGGGCCGGCCAAAGAGGCGGGATGCGCAA
66 CCGACGAAACGAGCGGGCGGG-GGGCG-G-GCACTAC--GCCGGCCAGAGAGGCGGGATGCGCAA
* * *
15991070 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCATATCTTCATATTTTTGCCATGCCAATGCC
126 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
* *
15991135 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTACGCCTTCATCTGAAGTTTCATGGCAAGA
191 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
15991200 TGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG-GAATTTTTTAAAATTTT
256 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAG-ATTTTTTAAAATTTT
** * *
15991264 TTCAGAAGGAGTTTTGGCCCCAAACTTTTTAGACGGGATCCTTGTATTTTTGTTGGCATGCATAA
320 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC--AC
* * *
15991329 AAAAAAATTCAGCTAAAAACTTGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
383 AAAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
15991394 TTTCAGATACTTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
448 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* ** * *
15991459 TGAGTTCTTGAGGTTTGACAAGGAATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCGC
513 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
15991524 ACATCATGTGCGCACACCCCCCCTGGCCCCCCCGATTGTCGGAACCCCAATGCCGCCGGTCAGGC
578 ACATCATGTGCGCACACCCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGT
* * * * *
15991589 TCTCCGGCGATGGTGTCTCAACGAAGAAAAATACGACACCAGCACATGCCCAAGCCCAGCATGTG
642 TCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* *
15991654 CTGCCGCAACCCTCGGTCCAGTATGATCTTAGACTGGGAATGAACTCAGTATGCTTAGACTGGGA
707 CTG-CGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
*** * **
15991719 ATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCTACCGTTCAACCGGCCAGAGGGG
771 ATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGG
* * * * *
15991784 CGGGACGCGCAAGCCAGCGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCT
836 CGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
15991837 TGCTGCCGCAACCCTCCA-TCCGG-TCTGATCTTAGACTGGGAATAAACTCTGTAAGACTAAGCC
1 TGCTACCGCAACCCT-CAGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * ** * * *
15991900 AACCGACGAAACGAGCGGGC---GGGCGGGTACCACTTCGACCAGAGAGGCGGGATGCACAAACC
64 AACCGACGAAACGAGCGGGCGGGGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
*
15991962 GTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
129 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
15992027 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
194 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
15992092 CTCGTTTTCTATTTTTCATGATTTTTTAAACTTTTTACGATTCG-GCATTTTTTAAAAATTTTTT
259 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAG-ATTTTTT-AAAATTTTTT
*
15992156 -AGAAGGCGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
322 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
**
15992220 AAAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
387 AACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
15992285 GGACACTTTAAAGGCTACTGGCATCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
452 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
15992350 TTCTCGAGGTTTGATGAGGGATA-GGGGACAATATAATGGCCAAGTACCAGCACCCATCGCACAT
517 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
15992414 CATGTGCGCACA-CCCCCCGGCCCCCCCAATCGTCGGAACCCCAATGCCGTCTGTCAGGTTCTCC
582 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCC
* * *
15992478 GACGATGGTGTCTCG-GGAA-AGAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTAT
647 GACGATGGTGTCCCGACGAAGA-AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-G
* * *
15992541 CGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
710 CGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * *
15992606 ACTCCGTATGTCTAAGTCAACCCACGAGACGAGCGTAG-GAGCGCTCAGCCGACCAGAGGGG-GG
775 ACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGT-GCGGGCGCTCAGTCGGCCAGAGGGGCGG
* ** * *
15992669 GATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTTTGCGTGCTACCGATCC
839 GATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
15992719 TACTACCAG-AACCCTCAGTTTGGTTCGATCTTAGGCTGGGAATGAACTCCATATGCCTAAGCCA
1 TGCTACC-GCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * *
15992783 ACCGACGAAACGAGCGGTCGGGCGGGCGTACACTACGCCAGCCAAAGAGGCGGGATGCGTAAGCC
65 ACCGACGAAACGAGCGGGCGGG-GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
15992848 GTGGATCGATAGGATGGT-GGTGGGTTTAGTCACATCTTCATATTTCTGCCATGCCAATGCCATT
129 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
15992912 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
194 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
15992977 CTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCA
259 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * *
15993042 CAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
324 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
15993107 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGG
389 CTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
15993172 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
454 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
15993237 CTCAAGGTTTGATGAGGGATA-AGGGCCAATATAATGGCCAAGTACCAGCACCCATCGCACATCA
519 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
15993301 TGTGCGCACACCCCCCCCGG------C---C--C----CCCCAA-----CCGGTCAGGTTCTCCG
584 TGTGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCG
* *
15993346 ACGATGATGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCG
648 ACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GCG
* * *
15993411 CAACCCTCGGTCCAGTCTGATCTTAGACTGGAAAAGAACTCCGTATGCTTAGAATGGGAATGAAC
712 CAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * ** **
15993476 TCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGATGGGAT
777 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGAT
* *
15993541 GCACAAGCCGGGGATCAGTTC-GGTCCCCCTCTGCGTGCTGCCGATCC
842 GCGCAAGCCGGGGATC-GATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * *
15993588 TGCTACCGCAACCCTCAGTATGGTTTGATATTAGACTAGGAATGAACTCTGTATGCCGATGCCAA
1 TGCTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
15993653 CTGACGAAACGAGCGGACGGGCGGGCGGGCACTACGTCGACCAGAAAGGCGAGATGCGAAAGCCG
66 CCGACGAAACGAGCGGGCGGG-GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
15993718 TGGATCGATATGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTACCAATGCCA-TT
130 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
15993782 TTTTGGCTCGTAAATTCATACAATGGTCCCTTATGCCTTCATGTGAAGTTTCATGGCAAGACGAC
195 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
15993847 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTAATGGTTCGAAATTTTTTAAAATTTTTTCAG
260 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* *
15993912 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCACGCACAAAAAAC
325 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAC
* *
15993977 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTTTGTCCATTTGAAAAAAGTGTCCCCATTTCAGA
390 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
15994042 CACTTTAATGGCTACTCGCAGCAAACTTGTAAAATTTCAAATGCTCTTTAAGGGGGTGTGAGTTC
455 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
15994107 TCGAGGTTTGATGAGGGATAGGGGGCCAATATCAGGTCCAAGTACCAGCACCCATCACACATCAT
520 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * *
15994172 GTGCGTAGACCCCCCCGACCCCCTCGATCATCGAAACCCCAATGTCGCCTGTCAGGTTCTCCGAC
585 GTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGAC
** * * * * * *
15994237 GATGGTGTCCCGGTGAAGAAAAATATGGCACCAGCAAATGCTCGAGCCAAGAATGTGCTAGCACA
650 GATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GCGCA
* * * *
15994302 ACACTCGGTCCAATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACAGGGAATGAAGTC
714 ACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* *
15994367 CGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGACCAGAGGGGTGGGATGC
779 CGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGC
* * * *
15994432 GTAAGTCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
844 GCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
15994477 TACTGCCGCAACCCTCAGTCTGGTTCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
15994542 CTGAAGAAACGAGCGGGTGGGTAGGCGGGCACTACGCCGGCCAGAGAGGCAGGATGTGCAAGCCG
66 CCGACGAAACGAGCGGGCGGG-GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * ** * * *
15994607 TGGATCGATAGGGTGGTAGGTAGATTTAGTTACAACTTCCTATTTCTGCTATGCCAATGCCATTT
130 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
15994672 TTCTAGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
195 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
** * *
15994737 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTAAGGTTCGAGATTTTTTAAACTTTTTTCAG
260 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* ** * * *
15994802 AAGGAGTTTTGGCCCTAAAAC-AAGTAGAAGTGATCCTTGTATTTTTTTTGGCACGCAC-AAAAA
325 AAGGAGTTTTGGCCC-CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
15994865 CATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 C-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
15994930 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGT
453 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
15994995 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
518 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * **
15995060 ATGTACGGACA-CCCCCCGGCCCCCCCGATCATCGGAACCCCAATGTCGTCGGTCAGGTTCTATG
583 ATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCG
* * * *
15995124 GCGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCTGAGACCAGCATGTGCTGC-C
648 ACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCGC
* *
15995188 GAAACC-C--T-C-G---G-TC-----C---G-AT---CT--G-AT-CTTAGACAGGGAATGAAC
713 -AACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* *
15995228 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGGGCTCAGTCGGCCAGAGGGGTGGGAT
777 TCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGAT
* * * * *
15995293 GCGCAAGCCGAGCATCAATCGGGTCCCCCTCTGCGTGTTGTCGATCC
842 GCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** *
15995340 TGCTGTCGCAACCCTC-GATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
1 TGCTACCGCAACCCTCAG-TCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
15995404 ACCGACAAAATGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
65 ACCGACGAAACGAGCGGGCGGG-GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
15995469 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC-TT
129 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * *
15995533 TTTTTGGGCTTGTAAATTCATACAATGGTCCCTTTAGCCTTTATGTGAAGTTTAATGGCAAGACG
194 TTTTT-GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
15995598 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTT
258 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTT
* *
15995662 CAGAAGGATTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
322 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
15995727 AAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
387 AACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
15995792 AGACGCTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGAG
452 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
** * *
15995857 TTCTCGAGGTTTGATGAGGGATAGGGGGAAAATATAAGGGCTAGGTACCAGCACCCA-CTGCACA
517 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCACA
* **
15995921 TCATGTGTGCACACCCCCCCCAGG-CCCCCCGATCGTCGGAACCATAA--T-G-C---C--G--C
581 TCATGTGCGCACA-CCCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTC
* ** **
15995974 T----C------G----G-CGAAGAAAAATGCGGCACCAGCACATGCTAGAGCCCATTATGTGCT
644 TCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
** *
15996024 GC-C-A-CAAC---CC--TC-GATC-----C-------G-A-TCCG-AT-CTTAGACTGGGAAAG
709 GCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * * *
15996064 AATTCCGTATGTCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCTAGAGTGGCGG
774 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGG
* * *
15996129 GATGCGCAAACCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
839 GATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * ** * * * *
15996179 TACTGCCACAACAGTCAGT-TCGG-TCTGATCATAGACTGAGATTGAACTCCGTATGCCTAAGAC
1 TGCTACCGCAACCCTCAGTCT-GGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
15996242 AACTGATGAAACGAGTGGGCGGATGGGCGGGCACTACACCGACCAGAGAGGCGGGATACGCAAGC
64 AACCGACGAAACGAGCGGGCGG-GGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
** *
15996307 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCGTATCTTCATATTTCTGCCATGCCAATGCCAC
128 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * *
15996372 TTTTCTAGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
193 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * *
15996437 ACTCGTTTTCTATATTTCATGATTTTGGAAAATTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
258 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
* * *
15996502 AGTAGGAGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTTTTGGCATGCACAAAAC
323 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-
* * * *
15996567 AA-TTCAGCTAAAAACTCAAACTGTACAAGAGTTTGGGACCATTTGAAAAAAGTGTCCCCATTTC
387 AACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15996631 AGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
452 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * **
15996696 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAGGTACCAGCACCCATCTTACAT
517 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* **
15996761 CATGT--GCACA-ACCCCCGGCCCCCCCGATCGTCGGAACCCCAATACCGCCGGTCAGGTTCTCC
582 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCC
*
15996823 GACGATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
647 GACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-C
* * **
15996888 GTAACACTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
711 GCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * ** *
15996953 CTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTACGGGCGCTCAACCGGCTAGAGGGGCGGGA
776 CTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGA
*
15997018 TGCGCAAGCCGGGGATCGATCGGGGCCCCCTCTGCGTGCTGCCGATCC
841 TGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
15997066 TGCTACCACAACCCTCGGTCCGGTAT-GATCTTAGACTGGGAATGAACTCCGCATACTTAAGCCA
1 TGCTACCGCAACCCTCAGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * * *
15997130 ACCGACGAAACGAGCGACCGGGCGGACGGGCACTATGCCGGCCAGAGAGGCGGGATGCCCAAGCC
65 ACCGACGAAACGAGCGGGCGGG-GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
15997195 GTGGATCGATATGGTGGTAGGTGGGTTTAGGCATATTTTCATATTTCTGCCATGCCAATGCCATT
129 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
15997260 TTTTTGGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
194 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
15997325 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTC
259 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTC
* *
15997389 AGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC-AAAA
323 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
15997453 ACATTCAGCTAAAAACTCAAAGTGTATAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTC
388 AC-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15997518 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAG
452 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
15997583 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACTAGCACCCATCACACAT
517 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * ** * * *
15997648 CATGTACGCACACCCCTTTCCGACCCCCCCGATCACCGAAACCCCAAT-TCCGTCGATCAGGTTC
582 CATGTGCGCACACCCC--CCCGGCCCCCCCGATCGTCGGAACCCCAATGT-CGCCGGTCAGGTTC
* * * * *
15997712 TTCGAGGATGGTGTCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
644 TCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* ** * * *
15997777 GTCGTAACCCTCCATCCGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
709 G-CGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * * *
15997842 GAACTCTGTATGCCTAAGTCAACCCATAAAACGAGCGTGCAGGCGCCCAGTCGGCCAGAGGGGCG
773 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCG
* * *
15997907 GGATGGGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGT-CTTGTCGATCC
838 GGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC-TGCCGATCC
* * * * * * *
15997958 TGCCACCGTAACCCTCAATC-CGATCATATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
1 TGCTACCGCAACCCTCAGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
15998022 ACTGACGAAACAAGTGGGCGGTCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCC
65 ACCGACGAAACGAGCGGGCGG-GGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * *
15998087 TTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTTATATTT-TACCATGCCAATGCCATT
129 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * * * *
15998151 TTTTTGGCTTGTAACTTCATACAATGGTCCCTTAAGCCTTCGTGTTAAGTTTCTTGGCAAGACCA
194 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* *
15998216 CTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
259 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
15998281 GAAGGAAG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAA
324 GAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
15998344 ACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTTG-CCATTTGAAAAAAGTGTCCCCATTT
388 AC-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTG-TGACCATTTGAAAAAAGTGTCCCCATTT
* *
15998408 CAGACACTTTAATGGCTACTAGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
451 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * ** *
15998473 GTTTTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGTGAAGTACCAGCACCCACCGCACA
516 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
15998538 TCATGTGCGCATACCCCCCCGGACCCCCCGATCGTCGAAACCCTAATG-CTGCCGGTCAGGTTCT
581 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTC-GCCGGTCAGGTTCT
** * * *
15998602 CCGGTGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATTCTCGAG-CCAGCATGTGCTG
645 CCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * *
15998666 TCGTAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTTCATATGCTTAGACAGGGAATG
710 -CGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * *
15998731 ATCTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGTCGGAGGGGCGT
774 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGG
* * ** * * *
15998796 GCTGCGCAAGCCGGGGATTGGCCGGGTCCCCCTTTGCGTACTGTCGATCC
839 GATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * * *
15998846 TACTGTCACAACCCTC-GATCCGG-TCTGGTCTTAGACTGGGAATGAACTCTGTATGCCTAAGCC
1 TGCTACCGCAACCCTCAG-TCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
15998909 AACCGACGAAACGAGCGGGCGGGCGTGCGGGCACTACGCCGACCAGAAAGACGGGATGCGCAAGC
64 AACCGACGAAACGAGCGGGCGGG-GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * * * * *
15998974 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTACCGTGCCTATCCCAT
128 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * *
15999039 TTTTTTGGCTTGTAAAATCATAAAATGGCCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
193 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* ** *
15999104 ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGGTTCGAGATTTTTTAAAATTTTTTC
258 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
*
15999169 AGAACGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAA
323 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
15999233 ACATTCAGCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
388 AC-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15999298 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAG
452 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
15999363 TTCTC-AGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
517 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** * *
15999427 CATGTGCGCATA-CCCCCTGG-CCCCCCGATCACCGGAACCCTAATG-CTGCCGGTTAGGTTCTC
582 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTC-GCCGGTCAGGTTCTC
** * ** * *
15999489 CGGTGATGGTGTCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTAC
646 CGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-G
* * * * * * *
15999554 CGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATAAATTCCATATGCTTAGATTGGGAATGA
710 CGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * *
15999619 ACTCCGTATGACTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTTAG-CTGGCCAGAGGGGCGG
775 ACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTC-GGCCAGAGGGGCGG
* * * * *
15999683 GATGCGCAAGTCGGGGATCGATCGAGTCCCCCTCTGCATGCTGCCAATCT
839 GATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** *
15999733 TGCTACCGCAACCTTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
15999798 CCGATGAAACGAGCGGGCGGGCGGGCGGGCAC
66 CCGACGAAACGAGCGGGCGGG-GGGCGGGCAC
15999830 AACTTCATAT
Statistics
Matches: 7063, Mismatches: 767, Indels: 336
0.86 0.09 0.04
Matches are distributed among these distances:
834 2 0.00
835 26 0.00
836 1 0.00
837 9 0.00
838 4 0.00
839 680 0.10
840 11 0.00
842 1 0.00
844 2 0.00
846 2 0.00
850 2 0.00
854 2 0.00
856 2 0.00
858 1 0.00
860 1 0.00
861 42 0.01
862 15 0.00
863 639 0.09
864 8 0.00
865 28 0.00
866 2 0.00
867 29 0.00
868 158 0.02
869 502 0.07
870 93 0.01
871 5 0.00
872 6 0.00
874 1 0.00
875 1 0.00
876 2 0.00
878 2 0.00
879 2 0.00
880 2 0.00
881 3 0.00
882 109 0.02
883 156 0.02
884 73 0.01
885 428 0.06
886 188 0.03
887 1043 0.15
888 396 0.06
889 1139 0.16
890 374 0.05
891 398 0.06
892 402 0.06
893 5 0.00
896 1 0.00
897 64 0.01
898 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
TGCTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
TTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAACT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGACG
ATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCGCAAC
CCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
TATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGC
AAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
Found at i:15996946 original size:26 final size:26
Alignment explanation
Indices: 15996910--15996962 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
15996900 CTGGTCTGAT
15996910 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15996936 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15996962 C
1 C
15996963 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15997831 original size:26 final size:26
Alignment explanation
Indices: 15997802--15997854 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
15997792 CCGGTCCGAT
*
15997802 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
15997828 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
15997854 C
1 C
15997855 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:15998741 original size:26 final size:26
Alignment explanation
Indices: 15998690--15998742 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
15998680 CCAGTCTGAT
* *
15998690 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACAGGGAATGAACTCCATATG
* *
15998716 CTTAGACAGGGAATGATCTCCGTATG
1 CTTAGACAGGGAATGAACTCCATATG
15998742 C
1 C
15998743 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCATATG
Found at i:15999628 original size:26 final size:26
Alignment explanation
Indices: 15999577--15999628 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
15999567 TCGGTCTGAT
*
15999577 CTTAGACTGGGAATAAATTCCATATG
1 CTTAGACTGGGAATAAACTCCATATG
* * *
15999603 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCATATG
15999629 ACTAAGTCAA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.15, G:0.23, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCATATG
Found at i:15999789 original size:887 final size:890
Alignment explanation
Indices: 15996049--15999829 Score: 5343
Period size: 887 Copynumber: 4.3 Consensus size: 890
15996039 CCGATCCGAT
* * * *
15996049 CTTAGACTGGGAAAGAATTCCGTATGTCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
* * * *
15996114 CGGCTAGAGTGGCGGGATGCGCAAACCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * ** * * * * * *
15996179 TACTGCCACAACAGTCAGTTCGGTCTGATCATAGACTGAGATTGAACTCCGTATGCCTAAGACAA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** * *
15996244 CTGATGAAACGAGTGGGCGGATGGGCGGGCACTACACCGACCAGAGAGGCGGGATACGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGCCG
** * *
15996309 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCGTATCTTCATATTTCTGCCATGCCAATGCCACTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
* * *
15996374 TTCTAGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
15996439 TCGTTTTCTATATTTCATGATTTTGGAAAA-TTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
391 TCGTTTTCTATTTTTCATGATTTT-TAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * *
15996503 GTAGG-AGTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTTTTGGCATGCAC-AAAA
455 GAAGGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
15996566 CAATTCAGCTAAAAACTCAAACTGTACAAGAGTTTGGGACCATTTGAAAAAAGTGTCCCCATTTC
520 C-ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
15996631 AGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
584 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * **
15996696 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAGGTACCAGCACCCATCTTACAT
649 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** * *
15996761 CATGTGCACA-A-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATACCGCCGGTCAGGTTCTCCG
714 CATGTGCGCATACCCCCCGGACCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCG
** * *
15996824 ACGATGGTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
779 GTGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * *
15996889 TAACACTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
844 TAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATAAACTCCATATG
* * * **
15996936 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTACGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
* * *
15997001 CGGCTAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGGCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * *
15997066 TGCTACCACAACCCTCGGTCCGGTATGATCTTAGACTGGGAATGAACTCCGCATACTTAAGCCAA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * *
15997131 CCGACGAAACGAGCGACCGGGCGGACGGGCACTATGCCGGCCAGAGAGGCGGGATGCCCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGCCG
* * * *
15997196 TGGATCGATATGGTGGTAGGTGGGTTTAGGCATATTTTCATATTTCTGCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
*
15997261 TTTTGGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
*
15997326 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTCA
391 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCA
* *
15997390 GAA-GTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
455 GAAGGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
15997454 CATTCAGCTAAAAACTCAAAGTGTATAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCA
520 CATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
15997519 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGT
585 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
15997584 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACTAGCACCCATCACACATC
650 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
15997649 ATGTACGCACACCCCTTTCC-GACCCCCCCGATCACCGAAACCCCAATTCCGTCGATCAGGTTCT
715 ATGTGCGCATACCCC---CCGGA-CCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCT
* * *
15997713 TCGAG-GATGGTGTCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
776 CCG-GTGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * * *
15997777 GTCGTAACCCTCCA-TCCGGTCCGATCTTAGATTGGGAATGAACTCCGTATG
840 GCCGTAACCCT-CAGTCCGGTCTGATCTTAGACTGGGAATAAACTCCATATG
* * * *
15997828 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATAAAACGAGCGTGCAGGCGCCCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
* *
15997893 CGGCCAGAGGGGCGGGATGGGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGT-CTTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC-TGTCGATC
* ** ** * *
15997957 CTGCCACCGTAACCCTCAATCCGATCAT-ATCTTAGACTGGGAATGAACTCCATATGCCTAAGCC
130 CTGCTACCACAACCCTCGGTCCGGTC-TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
15998021 AACTGACGAAACAAGTGGGCGGTCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGC
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGC
* * *
15998086 CTTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTTATATTT-TACCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAT
* * * * *
15998150 TTTTTTGGCTTGTAACTTCATACAATGGTCCCTTAAGCCTTCGTGTTAAGTTTCTTGGCAAGACC
324 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * *
15998215 ACTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
389 ACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
15998280 AGAAGGAAG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
454 AGAAGGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
15998344 ACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTTG-CCATTTGAAAAAAGTGTCCCCATTT
519 ACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTG-TGACCATTTGAAAAAAGTGTCCCCATTT
* *
15998408 CAGACACTTTAATGGCTACTAGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
583 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * ** *
15998473 GTTTTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGTGAAGTACCAGCACCCACCGCACA
648 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
** * *
15998538 TCATGTGCGCATACCCCCCCGGACCCCCCGATCGTCGAAACCCTAATGCTGCCGGTCAGGTTCTC
713 TCATGTGCGCATA-CCCCCCGGACCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTC
* * *
15998603 CGGTGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATTCTCGAG-CCAGCATGTGCTGT
777 CGGTGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * *
15998667 CGTAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTTCATATG
842 CGTAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATAAACTCCATATG
* *
15998716 CTTAGACAGGGAATGATCTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
* * * * * ** * *
15998781 CGGTCGGAGGGGCGTGCTGCGCAAGCCGGGGATTGGCCGGGTCCCCCTTTGCGTACTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * * *
15998846 TACTGTCACAACCCTCGATCCGGTCTGGTCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
15998911 CCGACGAAACGAGCGGGCGGGCGTGCGGGCACTACGCCGACCAGAAAGACGGGATGCGCAAGCCA
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGCCG
* * * *
15998976 TGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTACCGTGCCTATCCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
* * *
15999041 TTTTGGCTTGTAAAATCATAAAATGGCCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
15999106 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGGTTCGAGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
*
15999171 AACG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAC
456 AAGGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAC
* *
15999235 ATTCAGCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
521 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
15999300 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTT
586 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
15999365 CTC-AGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
651 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
15999429 TGTGCGCATACCCCCTGG-CCCCCCGATCACCGGAACCCTAATGCTGCCGGTTAGGTTCTCCGGT
716 TGTGCGCATACCCCCCGGACCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGT
* * * * *
15999493 GATGGTGTCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTACCGCA
781 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTA
* *
15999558 ACCCTCAGTTCGGTCTGATCTTAGACTGGGAATAAATTCCATATG
846 ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATAAACTCCATATG
* * * *
15999603 CTTAGATTGGGAATGAACTCCGTATGACTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTTAG-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
* * * * *
15999667 CTGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGAGTCCCCCTCTGCATGCTGCCAATC
66 C-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
15999732 TTGCTACCGCAACCTTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
*
15999797 ACCGATGAAACGAGCGGGCGGGCGGGCGGGCAC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCAC
15999830 AACTTCATAT
Statistics
Matches: 2576, Mismatches: 290, Indels: 56
0.88 0.10 0.02
Matches are distributed among these distances:
886 89 0.03
887 894 0.35
888 395 0.15
889 401 0.16
890 2 0.00
891 386 0.15
892 407 0.16
893 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (890 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
AAGGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAC
ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCATACCCCCCGGACCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGT
GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTA
ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATAAACTCCATATG
Found at i:16000451 original size:26 final size:26
Alignment explanation
Indices: 16000401--16000453 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16000391 CCAGTCCCAT
* *
16000401 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTACGTATG
*
16000427 CTTAGACTGGGAATAAACTATGTATG
1 CTTAGACTGGGAATAAACTACGTATG
16000453 C
1 C
16000454 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTACGTATG
Found at i:16000634 original size:824 final size:821
Alignment explanation
Indices: 15999011--16000652 Score: 2464
Period size: 824 Copynumber: 2.0 Consensus size: 821
15999001 TTAGGTACAT
* * *
15999011 CTTCATATTTCTACCGTGCCTATCCCATTTTTTTGGCTTGTAAAATCATAAAATGGCCCCTTAAG
1 CTTCATATTTCTACCATGCCAATCCCATTTTTCTGGCTTGTAAAATCATAAAATGGCCCCTTAAG
* * *
15999076 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTT
66 ACTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTT
* * *
15999141 TCGGTTCGAGATTTTTTAAAATTTTTTCAGAACGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
131 ACGCTTCGAGATTTTTTAAAATTTTTTCAGAACGAGTTTTGGCCCCAAACTTGGTAGAAGTGATC
* * * *
15999206 CTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAACCTCGAAGTGTACAAGATTTTGTG
196 CTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTGTG
*
15999271 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
261 ACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
*
15999336 CTAAAATGCTCTTTAAGGGGGTGTGAGTTCTCAGGTTTGATGAGAGATAGGGGGCCAATATAAGG
326 CTAAAATGCTCTTTAAAGGGGTGTGAGTTCTCAGGTTTGATGAGAGATAGGGGGCCAATATAAGG
* * *
15999401 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCATACCCCCTGGCCCCCCGATCACCGGAACC
391 GCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTGGCCCCCCAATCACCGGAACC
* * * * *
15999466 CTAATGCTGCCGGTTAGGTTCTCCGGTGATGGTGTCCCGATGAAGAAAAATGTGGCACCAGCACA
456 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACA
* * ** *
15999531 TGCCCAAGCCCAGCATGTGCTACCGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATAAATT
521 TGCCCAAGCCCAGCATGTACTACCGCAACCCTCAGTTCAGTCCCATCTTAGACTGGGAATAAACT
* * * *
15999596 CCATATGCTTAGATTGGGAATGAACTCCGTATGACTAAGTCAACCCATGAAACGAGCGTGCGGGC
586 CCATATGCTTAGACTGGGAATAAACTACGTATGACTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * *
15999661 GTTTAGCTGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGAGTCCCCCTCTGCATGCTG
651 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGAGGATCGATCGAGTCCCCCTCTGCATGCTG
* ** * * * ***
15999726 CCAATCTTGCTACCGCAACCTTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
716 CCAATCCTGCTACCAAAACCCTCGATCCACTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
** **
15999791 AAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGGGCACAA
781 AAGCCAACCGACAAAACGAGCGAACGGGCGGGCGGGCACAA
* * * *
15999832 CTTCATATTTCTTCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT-GCTCCCTTAA
1 CTTCATATTTCTACCATGCCAATCCCATTTTTCTGGCTTGTAAAATCATAAAATGGC-CCCTTAA
**
15999896 GACTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
65 GACTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTT
* * * *
15999961 TACGCTTCGAGATTTTTTAAAA-TTTTTCAGAAGGATTTTTGGTCCCAAACTTGGTAGAAGTGTT
130 TACGCTTCGAGATTTTTTAAAATTTTTTCAGAACGAGTTTTGGCCCCAAACTTGGTAGAAGTGAT
*
16000025 CCTTGTTTTTTTGTTGGCATGCAAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTG
195 CCTTGTATTTTTGTTGGCATGC-AAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTG
*
16000090 TGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAA
259 TGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
16000155 ATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
324 ATCTAAAATGCTCTTTAAAGGGGTGTGAGTTCTC-AGGTTTGATGAGAGATAGGGGGCCAATATA
* *
16000220 AGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTCGGGCCCCCCAATCGCTG
388 AGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCT--GGCCCCCCAATCACCG
16000285 GAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGTGGCACCA
451 GAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGTGGCACCA
* **
16000350 GCACATGCCCGAGCCCAGCATGTACTGTCGCAACCCTCA-TTCCAGTCCCATCTTAGACTGGGAA
516 GCACATGCCCAAGCCCAGCATGTACTACCGCAACCCTCAGTT-CAGTCCCATCTTAGACTGGGAA
* * * *
16000414 TGAACTCCGTATGCTTAGACTGGGAATAAACTATGTATGCCTAAGTCAACCCACGAAACGAGCGT
580 TAAACTCCATATGCTTAGACTGGGAATAAACTACGTATGACTAAGTCAACCCACGAAACGAGCGT
* * *
16000479 GTGAGG-GCTCAGCCGGCTAGAGGGGCGGGATGCGTAAGTCGAGGATCGATCGAGTCCCCCTCTG
645 GCG-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGAGGATCGATCGAGTCCCCCTCTG
** ** *
16000543 TGTGCTGCTGATCCTGCTACCAAAACCCTCGATCCACTCTGATCTTAGACTGGGAATGAACTCCG
709 CATGCTGCCAATCCTGCTACCAAAACCCTCGATCCACTCCGATCTTAGACTGGGAATGAACTCCG
*
16000608 TATGCCTCAGCCAACCGACAAAACGAGCGAACGGGCGGGCGGGCA
774 TATGCCTAAGCCAACCGACAAAACGAGCGAACGGGCGGGCGGGCA
16000653 TTACGCCGGT
Statistics
Matches: 733, Mismatches: 81, Indels: 11
0.89 0.10 0.01
Matches are distributed among these distances:
820 60 0.08
821 267 0.36
822 74 0.10
823 2 0.00
824 328 0.45
825 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (821 bp):
CTTCATATTTCTACCATGCCAATCCCATTTTTCTGGCTTGTAAAATCATAAAATGGCCCCTTAAG
ACTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTT
ACGCTTCGAGATTTTTTAAAATTTTTTCAGAACGAGTTTTGGCCCCAAACTTGGTAGAAGTGATC
CTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTGTG
ACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
CTAAAATGCTCTTTAAAGGGGTGTGAGTTCTCAGGTTTGATGAGAGATAGGGGGCCAATATAAGG
GCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTGGCCCCCCAATCACCGGAACC
CCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACA
TGCCCAAGCCCAGCATGTACTACCGCAACCCTCAGTTCAGTCCCATCTTAGACTGGGAATAAACT
CCATATGCTTAGACTGGGAATAAACTACGTATGACTAAGTCAACCCACGAAACGAGCGTGCGGGC
GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGAGGATCGATCGAGTCCCCCTCTGCATGCTG
CCAATCCTGCTACCAAAACCCTCGATCCACTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
AAGCCAACCGACAAAACGAGCGAACGGGCGGGCGGGCACAA
Found at i:16002045 original size:26 final size:26
Alignment explanation
Indices: 16001995--16002047 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16001985 CTGGTCTGAT
**
16001995 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16002021 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16002047 C
1 C
16002048 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16003792 original size:26 final size:26
Alignment explanation
Indices: 16003742--16003794 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16003732 CTAGTCTGAT
**
16003742 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16003768 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16003794 C
1 C
16003795 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16004683 original size:26 final size:26
Alignment explanation
Indices: 16004632--16004684 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16004622 CTGGTCCAAT
* ***
16004632 CTTAGACTGGGAATGAACTGTGTATG
1 CTTAGACTAGGAATGAACTCCATATG
16004658 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
16004684 C
1 C
16004685 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:16006441 original size:26 final size:26
Alignment explanation
Indices: 16006412--16006462 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16006402 CTGGTCCGGT
16006412 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16006438 CTTAGATTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16006463 ACCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16007300 original size:26 final size:26
Alignment explanation
Indices: 16007271--16007323 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16007261 CCGATCCGAT
16007271 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
16007297 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16007323 C
1 C
16007324 CTAAATCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16008173 original size:26 final size:26
Alignment explanation
Indices: 16008137--16008189 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16008127 CTGATCCGAT
16008137 CTTAGACTGGGAATGAACT-TCGTATG
1 CTTAGACTGGGAATGAACTCT-GTATG
16008163 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16008189 C
1 C
16008190 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16009951 original size:25 final size:26
Alignment explanation
Indices: 16009905--16009956 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
16009895 CCATTCCGAT
*
16009905 CTTAGACTGGGAATGAAGTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16009931 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16009956 C
1 C
16009957 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 17 0.68
26 8 0.32
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16010338 original size:887 final size:888
Alignment explanation
Indices: 16001275--16019917 Score: 22821
Period size: 888 Copynumber: 21.1 Consensus size: 888
16001265 TACCGCATTG
* * * * **
16001275 CTCGGTCCGATCTGATCTTAGACTCGGAATGAACTCCGTATGCCTAAGCCAACAAGA-TAAATAA
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC-CGACGAAACGA
* ** * * * * ** *
16001339 GCGGGTGGGCGGGCTTGTACAACGCCAGACAGAGAGGCGGGATGAACAAGCCGCGGATCGATAGG
65 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* *
16001404 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCTTGGA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
16001469 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* *
16001534 TTTCACGATTTTTGAAACTTTTTACGGTT-TGGAATTTTTTAAAATTTTTTCA-AATGGAGTTTT
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGG-ATTTTTTAAAATTTTTTCAGAA-GGAGTTTT
* * * * *
16001597 GGCCCCAAACATGGTAGACGTGATCCTTATAGTTTTGTTGGCATGCACAAAACAATTCAGCCAAA
323 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
16001662 AACTCGAAGTATACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATG
388 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
16001727 GCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTCTTGAGGTTT
453 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCGAGGTTT
* * *
16001792 GATGAGGGATAGGGGGCCAATATAA-GGCCAAGGACCAGCACCCATCACACATCATGTGCGTAGG
517 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA--
* ** * * *
16001856 C-CCCCCCGGCCCCCCGATCACCGGAACCCCAATGCCGTCAGTCAGGTTCTCCGACGATGGTGTG
580 CACCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTC
** * * * * * * *
16001920 CCGATGAAGAAAAATGTGACACCAGCACATTCTCAAGCCCAGCATGCGTTGCCGCAACCCTCGGT
645 CCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * **
16001985 CTGGTCTGATCTTAGACTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
710 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
16002050 AAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGTGGGATACGCAAGCCGG
775 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGA
** * * ** * * *
16002115 GGATCGATCGGATCCCCCTCTACGTGCTATCGATCCTGCTACTGTAACC
840 GGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
** ** ** * *
16002164 CTCAATCCGACCCAATCTTAGAGTGGGAATGAACTCCGTATGCCTAAGGCAACCGACGAAACGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * * *
16002229 CGGGCAGGCGGGCGGGCATTATGCTGGCCAGAGAGGCGCGATGCGCAAGCCGTGAATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* *
16002294 TGGTAGGTGGGATTAGGCACATCTTGATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
* * * * *
16002359 ATTCATACAATGGTCCCTTAAGCCTTCTTGTGAAGTTTCACGGCAAGAAGACTTGCTTTCTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
*
16002424 TTCACGATTTTT-GAA------A-----C-----TTTTTAAAATTTTTT----AGGAGTTTTGGC
261 TTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
* *
16002468 CCCAAACTTGGTAGACCTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAAC
326 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* *
16002533 TCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACATTAATGGCT
391 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
16002598 ACTGGCAACAAACCTGTAAAACCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGACGTTTGATG
456 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * *
16002663 AGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCGCACAACATGTGTGCACACCCC
521 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * * *
16002728 CTCGGCCCCCCTGATCGTCGGAACCCCAATGTCGTCGGTTAGGTTCT-TGGACGATGGTGTCCCG
586 C-C-GCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGG-CGATGGTGTCCCG
* * * ** * ** *
16002792 ACGAAGAAAAATGTGGCACCAGCACATGCCCAAGAGCAGCATGTGCTACCGCAACATTCAGTCCG
648 GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
* * * *
16002857 GTCCGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGAGAATGAACTTCGTATGCCTAAC
713 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * ** * *
16002922 TCAA--CACGAAACGAGCGTGCGTGCACTTAGCCGGCCAAAGGGGCGGGATGCATAAGTCGGGGA
778 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGA
* * ** * *
16002985 TCGACCGGGTCCCCCTCTGCCTGCTATCGATCCTGCCGCTGCAACC
843 TCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* ** * * * * * * *
16003031 CTCAG-CTCTATTTTATCTTAGACTGGGAATGACCTCTGTATGCCT-AGCCGATCGACGAAATGA
1 CTCGGTC-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
16003094 ----GCGGACGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCACAAGCCGTGGATCGATAGG
65 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * *
16003155 GTGGTAGGTGGGTTTAGGCTCATCTTTATATTTCTGCCACGCCAATGCCATTTTTCTGGCTTGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
*
16003220 AATTCATACAATGGTCCCTTAAGCCTTCAT-TGGAAGTTTCATGGCAAGACGACTCATTTTCTAT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGT-GAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* *
16003284 TTTTCACGATTTTTGAAACTTTTTA-GGTTC-GAGATTTTTTTAAATTTTTTCAGAAGGAGTTTT
259 TTTTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * * *
16003347 GGCCCCAAGCTTGGTAGCCGTTATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAA
323 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
16003412 AACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATG
388 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * * * *
16003477 GCTATTGGCAGCAAACCTGTAAAAGCTCAAATGCTCTTTAAGGGAGTGTGAATTCTCGAGGTTTA
453 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* *
16003542 ATGAGGGACAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTGCGCAC-C
518 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
* ** * * *
16003606 CCCCGGGTCCCCCGATCGTCGGAACCCCAATACCG-CTGTCAGGTTCTCCGACGATGGTGTCCCG
583 CCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCG
* * * ** * * **
16003670 GCAAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTCCTATCGTAACACTCGGTCTA
648 GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
* **
16003735 GTCTGATCTTAGACTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
713 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * *
16003800 TCAACCCACGAAACGGGCGTGCGGGTGCTCAGCCGACCAGAAGGGCAGGATGCGTAAGTCGGGGA
778 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGA
* * * ***
16003865 TCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCCTACTATTGCAA-C
843 TCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * *
16003910 CTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACAAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * *
16003975 CGGGCGGGCGAGCGGGC-GTAACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGG
66 CGGGCGGGCGGGCGGGCACT-ACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * *
16004039 GTGGTAGGTGGGTTTAGGCACCTCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCATGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
*
16004104 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * * *
16004169 TTTCATGATTTTCAAAACCTTTTATGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTAGG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * *
16004234 TCCCAGACTTGGTAGAAGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
16004299 CTTGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTTAGACACTTTAATGGC
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * *
16004364 TACTGGTAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGAT
455 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
16004429 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGCACCCATCGCACATCATGTGCGTATACCG
520 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-
* * * *
16004494 CCCCTGGCTCCCCCGATCGCCAGAACCCCAATGCCGTCGGTCAGGTTCTTCGGCGATGGTGTCCC
584 CCCC--GCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCC
** * * * * *
16004559 AACGAAGAAAAATGTGACACCAGCACATGCCTGAGCCCAGCATATGCTGCCGCAACCCTCGGTCT
647 GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
* ** * *
16004624 GGTCCAATCTTAGACTGGGAATGAACTGTGTATGCTTAGACTAGGAATGAACTCCATATGCCTAA
712 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* *
16004689 GTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
777 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGG
* ** * ** **
16004754 ATCGGCCGGGTCCCCCT-TACGTGCCACCGGTCCTGCTGTTGCATTC
842 ATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * **
16004800 CTTGGTCTGGTC-CATTCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATTAAACGA
1 CTCGGTCCGGTCTGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
16004864 ----GCAGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGAAAGTCGTGGATCGATAGG
65 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * *
16004925 GTGCTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTAGCTTGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
*
16004990 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGGCGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* *
16005055 TTTCATGATTTTTTAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGCA-TTTTG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGG-AGTTTTG
* * * * *
16005119 GCCCCAAACATGGTAGACATGATCCTTGTATTTTTTTTGGCATGGACAAAAAACTTCAGCTAAAA
324 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * *
16005184 ACTCGAAGTGTACAAAATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACAATTTAATGG
389 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* ** *
16005249 CTACTGGCAGCAAACCTGTAAATTCTCAAATGCTCTTTAATAGGGTGTGACTTCTCGAGGTTTGA
454 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
** *
16005314 TGAGGGATAGGCAGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACACCATGTGCGCACACC
519 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--
* * * *
16005379 CCCTCCCTGGCCCCCCCGATCGTCGGAACCCCAATGTCG-CTGGTCAAGTTCTTCGACGATGGTG
582 CCC-CCC--GCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGATGGTG
* * * * * *
16005443 TCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGGCCAGCAAGTTCTGCCGTAACCCTCG
643 TCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
* * * *
16005508 GTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGAGAATGAACTCCATGTGC
708 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * *
16005573 CTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTTAGCCGACCAGAGGGGCAGGATGCGCAAGCC
773 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
* * * * * *
16005638 GGGGATCGACCGAGTCCCCCTCTGCGTGCTACCAATCCTGCTAG-TGCAACC
838 GAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT-GCCGCAACC
** * * *
16005689 CTCGGTCCGGTCTGATCTTAGACTGCTAATGAACTTCGTATGCCTAAGCCAACCGATGAAACGAA
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * *
16005754 CGGGCGGGCGGGCAGGCAGTACGCCGGCCAGGGAGACGGGATACGCAAGCCGTGGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* *
16005819 TGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTAGCTTGTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
*
16005884 ATTCATACAATGGTCCCTTAATCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * *
16005949 TTCATGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
261 TTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
* *
16006014 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAACTTCAGCTAAAAAT
326 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* **
16006079 TTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTTCT
391 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
16006144 ACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGTGCGAGTTCTCGAGGTTTGATG
456 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * * *
16006209 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCACACATCATGTGCATACACCCC
521 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC--GCACACC
* * * * * * * * * *
16006274 TCCCCGACCCCCCCGATCGCCGGAACCCCATTGTCGCCAGTCAGGTTCTCCAGCAAAGGTGTTCG
584 -CCCCG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCC
* * * ** *
16006339 GGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGGCCAGCATGTGCTGCTACAACCCTCGGTCT
647 GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
* * *
16006404 GGTCCGGTCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATACCTAA
712 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * ** * *
16006469 GTCAACCCACGGAACGAGCATGCGGGTGCTCAATCGGCCAGCGGGGCTGGATGCGCAAGCC-AGG
777 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGA-G
* ** * * *
16006533 GATCGGCCGGGTGCCCCTCTATGTGCTACCGATCCTGCTACTGCAACC
841 GATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* *
16006581 CTCCGTCCGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAACGA
1 CTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
16006645 GCGGGCGGACGGGCGGGTACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
65 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* *
16006710 GTGGTAGGTGGGTTTAGGCACAACTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
* *
16006775 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAATTTTCATGGCAAGATGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * *
16006840 TTTCACCATTTTCAAAACTTTTTACGGTT-TGAGATTTTTTAAAATTTTTTCAGAAAGACTTTTG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
** *
16006904 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTAATGGC-T--AC-------TGGCAGC---A
324 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT-TCAGCTAAA
* *
16006956 AACT-----TGT--AA-A-------ACC---TG--AAAAGAGTCCCTATTTCAGACACTTTAATG
388 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
16007001 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
453 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* *
16007066 ATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCATGTGCGCACAC
518 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
*** * * * * * *
16007131 CCCACCCGGTAGCCCTGATCGCCAGAACCCTAATGCCGTCGGTCAGGTTCTCCGACGATAGTGTC
582 CCC-CCC-GCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTC
* * * * * *
16007196 CCGACGAATAAAAATGCGGCACCAGCACATTCTCAAGCCCAGCATGTGCTGCCACAACCCTCGGT
645 CCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * *
16007261 CCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCTGTATGCCT
710 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
16007326 AAATCAACCCACGAAACGAGCGTACGGGATG-T-A------CA-A--------AT---C--G--G
775 AAGTCAACCCACGAAACGAGCGTGCGGG-CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * *
16007367 -GGATCGGTCGGGTCCCCTTTTGCGTGCTGCCGATCCTGCTGTCGCAACC
839 AGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * * * * * * * * *
16007416 TTCGATTCGGTCCGATCTTGGAATAGGAATGAACTCCGTATGTCTAAGCCAATCAACAAAATGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * *
16007481 CGGGTGGACGGGCGGGCGCTACGCAC-GTCAGAGAGGCGGGATGCGTAAGCCGTGGATCGATAGG
66 CGGGCGGGCGGGCGGGCACTACGC-CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
*
16007545 GTGGTAGGTGGGTTTCGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
* * *
16007610 AATTCATACACTGGTCCCTTAAGCCTTCATGTGGAGTTTCATGGCAAGATGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * *
16007675 TTTCATGATTTTTAAAACTTTTTGCTGTTCAGGATTTTTAAAAAATTTTTT-AGAAGGACTTTTG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTT-TAAAATTTTTTCAGAAGGAGTTTTG
** * *
16007739 GCCCCAAACTTATTAGACGTGATCCTTGTCTTTTTGTTGGCATGCACAAAAACATTCAGCTAAAA
324 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
16007804 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCTATTTCAGACACTTTAATGG
389 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* *
16007869 CTACTGGCATCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTTTG-
454 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
** *
16007933 TGAGGGATAGGGCACCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACC
519 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C
* * * * * *
16007998 CACCCCGACCGCCCTGATCGTCGGAACCCCAATGTCGTCGGTCAGCTTCTCCGACGACGGTGTCC
583 C-CCCCG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCC
* ** * * *
16008063 CGGTGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCCGCAACCTTCTGTC
646 CGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * *
16008128 TGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTA
711 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
16008193 AGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCTGACCAGAGGTGTC-GGATGCGCAAGCC-A
776 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG-GGCGGGATGCGCAAGCCGA
** * * * *
16008256 GGGATCGATCGGGTCCCCCTCTGGGTGCTGTCGATCCTGCTGCCACAGCC
840 -GGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* *
16008306 CTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGA-
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * *
16008370 ---ACGGGC-GG-GTG--CTACGCTGGCCAGAGAAGCGGGATGCGCAAGCCGTGGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* * * *
16008428 TGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTACCAATGCCATTTTTCTAGCTTGTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
*
16008493 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * ** * *
16008558 TTCACAATTTTCAAAACGTTTTACGGTTGGGGATTTTATAAAATTTTTTCAAAAGGAGTTTTGGC
261 TTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
* * * * *
16008623 CCCAAACTTGGTAGACGTGATCCTTGTATCTTTCTTGGCATGCACAACAAAATTCAACTAAAACC
326 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* * *
16008688 TCGAAGTGCACAAGATTTTGTGACCATTTGGAAAGAGTGTCCCCATTTCAGACACTTTAATGGCT
391 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
16008753 ACAGGCAGCAAACCGGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATG
456 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
*
16008818 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACAACCC
521 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCC
* ** * * * *
16008883 CCGGCCCCCCCGATCACCGGAACCCTAATGCCGTCGGTCAAGTTCTCCGGTGATGGTGTCCCGAC
585 CCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGGC
* * * * * *
16008948 GAAGAAAAATACGGCATCAGCACATGCCTGAGCCCAGCATGTGCTGCCGTAACCCTCAGTTCGGT
650 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* ** * * *
16009013 CTGATCTTAGACTGGGAATGAACTCCAAACGGTTAGACCGGGAATGAACTCCGTATGCCTAAGTC
715 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * * *
16009078 AACCCACGAAACGAGCATGCGGGTGCTCAACCGGCCAGCGGGACGAGATGCGTAAGCCGGGGATC
780 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
* * *
16009143 GGCCGGGTCCCCCTCTACGTGCAGCCGATCCTGCTGCCACAACC
845 GGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
** * *
16009187 CTCTATCCGAT-TCGATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
1 CTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
** *
16009251 GCGGGCGGGTAGGC-GGCACGACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
65 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * *
16009315 GTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTGCGATGCCAATGCCATTTTTATGGCTTGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
16009380 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * *
16009445 TTTCACGATTTTCAAAACTTTTTACGGTTCAGGTTTTTTTTAAATTTTTTAAGAAGGCGTTTTGG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
** * *
16009510 CCCCAAACTTATTAGACGGGATCCTTGTATTTTTGTTGGCATGCACAAAAAAACTCAGCTAAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
16009575 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTCAAATACTTTAATGGC
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
16009640 TACTGGCAGCAAACCTGTTAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGGGGTTTGAT
455 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* *
16009705 GAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCATCCATCAG-ACATCATGTGCGCACACC
520 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCACATCATGTGCGCACACC
* * ** * * * * *
16009769 CCCCTCACCCCCGATCACCGGAAGCCCGATACCGTCGGTCAGGTTCTCAGGCGGTGGTGTCCCGG
584 CCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGG
* * * * ** **
16009834 CGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCCCAATCCAT
649 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
*
16009899 TCCGATCTTAGACTGGGAATGAAGTCCGTATGCTTAGACT-GGAATGAACTCCGTATGCCTAAGT
714 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * *
16009963 CAACCCACAAAAGGAGCGTGCGGGCGTTCAGCCGGCCAAAGGGGCAGGATGCACAAGCCGAGGAT
779 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGAT
* * * *
16010028 TGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACA
844 CGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * *
16010073 CTCGATCCGGTCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAACTGATGAAACGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* *
16010138 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCGTTGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* * *
16010203 TGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCTTTTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
* *
16010268 ATTCATACAATGGTCCCTTAAGCCTTCGTGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
*
16010333 TTCACGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
261 TTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * *
16010397 CCCCAAACTTGGTAGACGGGATCGTTATATTTTTGTTGGCATGCACAAAAATATTCAGCTAAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
16010462 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGC
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * * *
16010527 TACTGGCAACAAACCTATAAACTCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGGT
455 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
**
16010592 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCATCATCATGTGCAAACACC
520 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA-CATCATGTGCGCACACC
* * * * * * **
16010657 CCCGGCCCCCCCGATTGCCGGAACCCCAATGTCGCCGGTCAGGTTTTCCGATGATGGTGTCCCGG
584 CCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGG
* * * *
16010722 TGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--T-C-G
649 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* ** * *
16010781 ---G---TT----T--G-AT----T-CG-AT-TTTAGACTGGGAGCGAACTCTGCATGCCTAAGT
714 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * ** * *
16010826 TAACGCACGAAACGAGCGTGCGGGCGCTCATCCGGCCAAAGGAACGAGATGCGCAAGTCGAGGAT
779 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGAT
* ** * *
16010891 CGACCGGGTCCCCCTCTATGTGCTGCCGATCCTACTACCGCAACC
844 CGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * **
16010936 CTCGATCTGGTCCGATCTTAGACT-GGAATGAACTCTGTATGCCTAAGCCATTCGACG-AACGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * * * *
16010999 CGGGTGGGCGGGCAGGCACTATGCCGGCCAGAGATGCGGGATACGTAAGTCGTGGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
*
16011064 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATCCCA-TTTTCATGGCTTGTA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC-TGGCTTGTA
* * *
16011128 AATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * * *
16011193 TTTCACAATTTTTAAAACTTTTTACGATTCGGGATTTTTGAAAATTTTTTCAAAAGTAGTTTTGG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* *
16011258 CCCCAAACTTGGTTGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGTTAAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
16011322 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGC
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
16011387 TACTGGCAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTC-AGGTTTGAT
455 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
16011451 GAGGGATAGGGGGGCCAATACAAGGGCCAAGTACCAGCACCCATTGCACATCTTGTGCGCACACC
520 GAGGGATA-GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C
* * ** *
16011516 CCCCCGACACCCCTCGATCGTTGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGGTGTCT
583 CCCCCG-C-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCC
* * * * * * * * * *
16011581 CGGTGAAGAGAAATGCGACCCCAACACATGCCCGAACCCAGCATGTGCTGTCGTATCCGTCGGTC
646 CGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * *
16011646 TGGTCTGATCTTAGACTGGGAATTAACTCCGTATGCTTAGAC-GAGGAACGAACTCCGTATGCCT
711 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG-GGAATGAACTCCGTATGCCT
** * * * * * *
16011710 AAGTCAACCCATAAAACGAACGTGTGGGCACTCAGCTGGCCAGAGGGGTGGGATGCGTAAGCC-A
775 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGA
* * * * * * *
16011774 GGGATCAGTCGGGTCCCCCTCTGTGTGCTGCTGATCCTACTGTCGTAACC
840 -GGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
** * * * *
16011824 CTCGGTTTGGTCCGATCTTACACTGTGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-
* *
16011889 CGGACGGGCGAGCCGGCGGGCGAGCGGGTGGGCGAGCAGGCACTTTGCCGGCCAGAGAGACGGGA
65 --G-CGGGC--G--GGC--G-G-GC----GGGC-A-C---TAC---GCCGGCCAGAGAGGCGGGA
* * * *
16011954 CGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCT-ACATTG
107 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA-TG
*
16012018 CCAATGCCATTTTTCTGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
171 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * *
16012083 TGGCAAGACGACTGGTTTTCTATTTTTCACGATTTTCAAAACTTTTTATGGTTC-GAGATATTTT
236 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAG-GAT-TTTT
*
16012147 AAAAATTTTTT-------A------G------A------AG--GTGATCCTTGTATTTTTGTTGG
299 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * * * *
16012185 CTTGCAAAAAAAAAATTCAGCTAAAAACTCGAAGCGTGCAAGATTTTGTGACCATTTGAAAAACG
364 CATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
16012250 TGTCCCCATTTCAGACACTTTAAAT-GCTACTGGCAGCAAACCTGT-AAATCTCAAATGCTCTTT
428 TGTCCCCATTTCAGACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
16012313 AAGGGGGTTGTGAGTTCTCAGAGG-TTGATGAGAGATAGGGGGCGCAATATAAGGGTCAAGTACC
492 AAGGGGG-TGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGC-CAATATAAGGGCCAAGTACC
* * *
16012377 AGCACCCATTC-CACATCATGTGCGCACA--CCCCG--GCCCAGATTGTCGGAACCCCAATGCCG
554 AGCACCCA-TCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCG
* * * *
16012437 TC-GTCAGGTTCTCCGGAAGAAAATGCGATGGTTCCTCACATGCCCAAGCCTAAATGTGCATGCC
618 TCGGTCAGGTTCTCCGG-CG---ATG-G-T-G-T-C-C-C--GGCGAAG---AAA----AATG--
* * * *
16012501 ACCTCGCCAGTCCAGCGACTATGAACCCGTATGCCAAGCATGTGCTGTCGCAA-CCACGGTCC-G
661 ----CGGCA--CCAGC-AC-ATG--CCCG-A-GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* * * *
16012564 TCTGAT-TATAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAG
714 TCCGATCT-TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * *
16012628 TCAACCCACGAAATGAGCGTACGGGTGCTCAGCTGACCAGAGGTGTC-GGATGCGCAA-CCCAGG
778 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG-GGCGGGATGCGCAAGCCGA-G
** * * * *
16012691 GATCGATCGGGTCCCCCTCTGGGTGCTGTCGATCCTGCTGCCACAGCC
841 GATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * *
16012739 CTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGA-
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * * *
16012803 ---ACAGGC-GG-GTG--CTACGCCGGCCAGAGAAGTGGGATGCACAAGCCGTGGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* **
16012861 TGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCTGTGCCAATGCCATTTTTCTGGCTTGTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
* *
16012926 ATTCATACAATGGTCCCATAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * *
16012991 TTCACGATTTTCAAAACCTTTTACGGTTC-GAGATTTTTTTAAATTTTTTCAGAAGGAGTGTTGG
261 TTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * *
16013055 CCCCAAACTTGGTAGACATGATGCTTGTATATTTTTTTGACATGCACAAAAAAATTCAGCTAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * *
16013120 ACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAACGTGTCCCCATTTCAGATACTTTAATGG
389 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* *
16013185 CTACTGGCAGCAAACCTGAAAAATCTCAAATGCTCTTTAAGGGGGGGTGAGTTCTC-ATGGTTTG
454 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTG
*
16013249 ATGAGGGATAGGGGG-CAACTATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA
518 ATGAGGGATAGGGGGCCAA-TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * *
16013313 CCCCCCGCCCCCCCCGATCGTCGGAACCCCAATGCTGCCGATCAGGTTCTCCGGCGATGGTGTCC
582 CCCCCCG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCC
* * *
16013378 CGACGAAGAAAAATGTGGCACCAGCACATGCCAGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
646 CGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * * * ** *
16013443 TGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCTAAGATTCAGAATGAACTCCATATGCCTA
711 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* *** * *
16013508 AGTCAACCCACGAAATGAGCGTGCGGGCGCTCAATTGGCTAGAGGGGCGGGATGCGCAAGCCGGG
776 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAG
** * * * *
16013573 GATCGATCGGGTCCCCCTCTGCGTGCTGACGATCCTGCTGTCGTACCC
841 GATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * *
16013621 CTCGGTTC--TACTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAATCGATGAAACGA
1 CTCGGTCCGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
16013684 ACGGGCGGGTGGGCGGGCACTACGCCGGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
65 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* ** *
16013749 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAACACAATTTTTCTGGCTTGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
16013814 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * *
16013879 TTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * * *
16013944 CCCCAAAATTGGTAGACGTGATCCTTGTATTTTTGTTGTCATGCATAAAAAAATTCAGTTGAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
16014009 CTCGAACTGGACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * *
16014074 TACTGGCATCAAACCTGTAAAATCTCAAATGCTCTTTAATGGGGTGTGAGTTCTCGAGATTTGAT
455 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* *
16014139 GAGGGATAGAGGGCCAATATAAGGGCCACA-TACCAGCACCCATCGCACATCATGTGTGCACACC
520 GAGGGATAGGGGGCCAATATAAGGGCCA-AGTACCAGCACCCATCGCACATCATGTGCGCACACC
* *
16014203 CCTCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCTCCGACGATGGTGTCCCG
584 CC-CCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCG
* * * * * *
16014268 ACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCAAGTGCTGTCGCAACCCTCAGTCCA
648 GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
* *
16014333 GTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAG
713 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
16014398 TCAACCCACAAAAC-AGCGTGCGGGCGCTCAACCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGA
778 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGA
* * * * * * * * *
16014462 TCAGCCAGGTCCCCATCTGTGTGTTGTCAATCCTGCTACCGTAACC
843 TCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * *
16014508 CTTGATTCAGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * * *
16014572 ---ACAGGCGGGCGGGCACTACGCAGGCCAGAGAGTCGGGATGCACAAGCCATGGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* * * *
16014634 TGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCGAATGCCATTTTTCTAGCTCGTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
* *
16014699 ATTCTTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
*
16014764 TTCACGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
261 TTCACGATTTTTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* *
16014828 CACCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCAT-CACAAAAAAATTCAGCTAAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
16014892 CTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
*** * * *
16014957 TACTAAAAGCAAACTTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGGTCTCGAGGTTTGAT
455 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
*
16015022 GAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
520 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * ** * * *
16015087 CCGGCCCCCCCGATCATCGGAACCGCAATTTCGTCGGTCAGGTTCTCCGACGGTGGTGTCCCGAC
585 CCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGGC
* * *
16015152 GAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGT
650 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* * *
16015217 CTGATCTTAGACTGCGAATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTC
715 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * * *
16015282 AACCCACGAAATGAGTGTGCGGGCACTCAGCCAGCCAGAGGGGCTGGATGCGTAAGTCGGGGATC
780 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
** * * * * *
16015347 GGTTGGGTCCCCCTCTACGTGCTACCGGTCCTACTGCCACAACC
845 GGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * **
16015391 CTCAGTCCGGTCTAATCTTAGAC-GGGTAATGAACTCCGTATGCCTAAGCCAACCGACAAAAAAA
1 CTCGGTCCGGTCTGATCTTAGACTGGG-AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * **
16015455 GCGGGGGGGCGGGCGGGCACTACGTCGGCCAGAGTGGCGAAATGCGCAAGCCGTGGATCGATAGG
65 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* *
16015520 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATACCAATGCCATTTTTTTGGCTTGTA
130 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
*
16015585 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAGGTTTCATGGCAAGACGACTCGTTTTCTATT
195 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * * *
16015650 TTTCATGATTTTTGAAACATTTTACTGTTCGGGATTTTTTAAAATCTTTTCAGAAGGAGTTTTGG
260 TTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* * * * *
16015715 CCCCAAACCTT-GTAGAAGTGATCATTGTATTTTTCTTGGCATGCATAAAAACATTCAGCTAAAA
325 CCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
16015779 ACTCGAAATGTACAAGATTTTGTGACCATTAGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
389 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * *
16015844 CTACTGGCAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTTTGAGTTCTCAAGGTTTTA
454 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * *
16015909 TGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCCCCCATCGCACATCATGTGCACACACC
519 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * *
16015974 CCCCGGCCCCTCCCGATCG-CTGAAACCCAATGCCG-CTGGTCAGGGTCTCCGGCGATGGTGT-C
584 CCCC-GCCCC-CCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGATGGTGTCC
* * * * * *
16016036 CAGCTGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCAAGCATTTACTGCCGCAACCCTCGGT
646 CGGC-GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * *
16016101 CCGGTCCGATCTTAGACAT-GGAGTGAACTCCATATGGTTAGACTGGGAATGAACTCCGTATGCC
710 CCGGTCCGATCTTAGAC-TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * ** * * *
16016165 TAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAACCGGCCAGAGTAGTGCGATGCGCAAGTC-
774 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * *
16016229 AGGGATCGGCCAGGTCCCCCTCTGCGTGCTGTCGATCCTGTTGTCGCAACC
839 A-GGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * * *
16016280 TTCGGTCTGGT-TCGATCTTAGACTGGGAGTGAACTCCGTACGCCTAAGCCAACCCATGAAACGA
1 CTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
16016344 GCGGGCAGGCGGGCGGGCGGCCACTACGCCGGCCAGAAAGGCTGGATGCGCAAGCCGTGGATCGA
65 GC--G--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
*
16016409 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCACATTTCTGCCATGCCAATGCCATTTTTCTGGCT
126 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
* *
16016474 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTGATGGCAAGACGACTCGATTTC
191 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
16016539 TATTTTTCACGATTTTCAAAAC-TTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
256 TATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * * *
16016603 TTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAATAATTCAGCTA
321 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
16016668 AAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
386 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
16016733 TGTCTACTGGCAGCAAACCTGTAAAATCTCAATTGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTT
451 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* *
16016798 TGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAGAACCCATCGCACATCATGTGCGCAC
516 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *
16016863 ACCCCCCCGACCCCCCTCAATCGTCGGAACCCCAATGACGTCGGTCAAGTTCTCTGGCGATGGTG
581 A-CCCCCCG-CCCCCC-CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTG
* * * * *
16016928 TCCCGGTGAAGAAAAATACGACACCAGCACATGCCTGAGCCCAGCATGTGCTGTCGCAA--C-C-
643 TCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
*
16016989 GT----T--G------GTCT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGC
708 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * **
16017032 CTAAGTCAACCCACGAAACAAGCATGCGGGCGCTCAGCCAGCCAGAAAGGCGGGATGCGCAAGCC
773 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
* * * * * *
16017097 -AGGGATCGGTCGGGTCCCCCTCTGTGTGCTGTCGATCCTACTGCAGTAACC
838 GA-GGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * *
16017148 CTTGGTCCGGTCTGATCTTAGACT-GGAATGAACTCTGTATGCCTAAGCCAACCAACGAAACGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * * *
16017212 CGGGCGGGGGGGGGGGGGGCGGACACTATGCCGACAAGAGAGGCGGGATGCGCAAGCCATGGATC
66 CGGGC-------GGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* * * * *
16017277 AATAGGGTGGAAGGTGGGTTTAGGCACATCTTCATATTT-TTCTAGGCCAATGCCATTTTTCTGG
124 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* *
16017341 CTTGTAAATTCATCCAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAGGACGACTCGTTT
189 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** *
16017406 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAAATTTTTTAAAATTTTTTCAGAAGTAG
254 TCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAG
** * *
16017471 TTTTAACCCCAAACTTGGTAGACGTGATCTTTGTA-TTTTGTTGGAATGCACAAAAAAATTCAGC
319 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
16017535 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAATAGTGTCCCTATTTCAGACACTTT
384 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
16017600 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCAAGG
449 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
16017665 TTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
514 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * * * *
16017730 ACACTACCCAGCCCCCCCGATCGCCGGAACCCTAGTGTCG-CAGGTCAGGTTCTCCGGTGATGGT
579 ACAC-CCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGATGGT
* ** * * * *
16017794 GTCCCGGCAAAGAAAAATATGAAGCA--AGCACATGCCTGAGCCCAGCATGTGCTGTCGTAACCT
642 GTCCCGGCGAAG-AAAA-ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* *
16017857 TCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTA
705 TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * *
16017922 TGCCTAACTCAACCCATGAAACGAGCCTGCGGGCGTTCAGCCGGCCAGAGGGGCGGGATACGCAA
770 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * **
16017987 GCCAAGGATAGGCCGGGCCCCCCACTGCGTGCTGCCAATCCTGCTGTTGCAACC
835 GCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * * * * *
16018041 CTCGGTCTGGCCTAATCTTAAACTAGGAATGAACTCTGTATGCCTAAGCCAA-CTACGAAAGGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * *
16018105 CTGGCGGGCGGGCGGGTACTATGTCGGCCAGAGAGGCGGGATGCGGAAGCCGTGGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
*
16018170 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCGGGCTTGTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
*
16018235 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCAAGACGACTCGTTTTCTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * * *
16018300 TTCATGATTTTTGAAACTTTTTAAGGTTCAAGATTTTTT-AAATTTTTGTCAGAAAGAGTTTTGG
261 TTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTT-TCAGAAGGAGTTTTGG
* * * * * *
16018364 CCCCAAACTTGGTAGATGTGGTCCTTGAAATTTTGTTGGAATGCACAAAAAAATTCAGCTCAAAA
325 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
16018429 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGC
390 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
*
16018494 TACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
455 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
16018559 GAGGGATAGGGGGCCAATATAAGGGCGAAGTACCAGCACCCATCGCACGTCATGTGCGAACACCC
520 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACAC
* * * * *
16018624 CCCCCGGCCCCCCTCGATCGCCAGAACCCTAATGCCGCCGGTCAGGTTCTCCGACGATGGTG-CC
583 CCCCC-GCCCCCC-CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCC
* *
16018688 TCGACGAAGAAAAATGCGGCACCAGCACATGGCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
646 -CGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * * *
16018753 CTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATTCCT
710 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * *
16018818 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGG-CAGGATGGGTGGGATGCACAAGCCG
775 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA-GAGGGGCGGGATGCGCAAGCCG
* * * *
16018882 AGGATCGGCC-GG-CCCCTTTCTGCATGCTACCAATCCTGCTGCCGCAACC
839 AGGATCGGCCGGGTCCCC-CTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
* * * * *
16018931 CTTGGTCTGGTTTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
*** * * * * * *
16018996 CAAACGAGCGGGTGGGCACTACGCCAGCCAGAGAGGCGGCATGTGTAAGCCGTGGATCGATAGGG
66 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
*
16019061 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCTTGTAA
131 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
*
16019126 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTT
196 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* ** *
16019191 TTCATGATTTTCCAAGCTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
261 TTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
** * * *
16019256 CCCAAACTT-AAAGACGTGATGCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAGC
326 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
*
16019320 TCGAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTCCCCATTTCAGACACTTTAATGGCT
391 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * *
16019385 ACTGGCAGGAAACCTGTAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCTCAAGGTTTGATG
456 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * *
16019450 AGGGATAGGGGGCCAATATAAGGGCCAAGTAACAACGCCCATCGCACATCAT-TGCGCACACCCC
521 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * * * ** * * *
16019514 CAGCCCCTCCGATCGTCGAAACCTCAATGCCACCAGTCAGGTTCTCCGACGATGGTGTCCCGGTG
586 CCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCG
* * *
16019579 AA-AAACAATGCGGCACAAGCACATGCCCCAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGAT
651 AAGAAA-AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG--
*
16019643 CCGATCTTAGACAGGGAGTGAACTTCGTATGCTTAGTCTGGGAATGAACTTCGTATGCTTAGACT
713 --G-TC-----C---GA-T---C-T--TA-G---A--CTGGGAATGAACTCCGTATGCTTAGACT
* * * * *
16019708 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAATGAGCGTGTGGGCGCTCAGTCGACCAGA
754 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * ** *** *
16019773 GGGGCGCGATGCACAAGCTGGGGATCGGCCGAGTCCCCCTCTATGTGCTATTGATCCTGCTGTCG
819 GGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
16019838 CAACC
884 CAACC
** * * * * *
16019843 CTCGGTTTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCATCCCACGAAACGAG
1 CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
*
16019908 CGTGCGGGCG
66 CGGGCGGGCG
16019918 CTCAGCCGGC
Statistics
Matches: 15402, Mismatches: 1898, Indels: 885
0.85 0.10 0.05
Matches are distributed among these distances:
835 351 0.02
836 13 0.00
838 3 0.00
840 1 0.00
843 2 0.00
844 4 0.00
845 1 0.00
847 5 0.00
852 5 0.00
854 2 0.00
855 1 0.00
858 5 0.00
859 213 0.01
860 322 0.02
861 280 0.02
862 314 0.02
863 141 0.01
864 3 0.00
865 10 0.00
866 270 0.02
867 383 0.02
868 352 0.02
869 494 0.03
870 153 0.01
871 3 0.00
872 17 0.00
873 6 0.00
874 3 0.00
875 4 0.00
876 3 0.00
877 2 0.00
878 153 0.01
879 63 0.00
880 126 0.01
881 383 0.02
882 989 0.06
883 598 0.04
884 501 0.03
885 381 0.02
886 765 0.05
887 1134 0.07
888 1843 0.12
889 973 0.06
890 795 0.05
891 524 0.03
892 879 0.06
893 840 0.05
894 116 0.01
895 8 0.00
896 6 0.00
898 9 0.00
899 4 0.00
900 1 0.00
901 7 0.00
902 4 0.00
903 8 0.00
904 1 0.00
905 3 0.00
906 5 0.00
907 10 0.00
908 49 0.00
909 137 0.01
910 44 0.00
911 115 0.01
912 90 0.01
913 35 0.00
914 193 0.01
915 218 0.01
916 9 0.00
917 17 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCACGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
CCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGGCG
AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCG
GCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC
Found at i:16011693 original size:26 final size:26
Alignment explanation
Indices: 16011655--16011707 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
16011645 CTGGTCTGAT
**
16011655 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16011681 CTTAGAC-GAGGAACGAACTCCGTATG
1 CTTAGACTG-GGAACGAACTCCGTATG
16011707 C
1 C
16011708 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16012608 original size:26 final size:26
Alignment explanation
Indices: 16012572--16012622 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16012562 CGTCTGATTA
*
16012572 TAGATTGGGAATGAACT-TCGTATGCT
1 TAGACTGGGAATGAACTCT-GTATGCT
16012598 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCTGTATGC
16012623 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
26 22 0.96
27 1 0.04
ACGTcount: A:0.27, C:0.14, G:0.27, T:0.31
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCTGTATGCT
Found at i:16014378 original size:26 final size:26
Alignment explanation
Indices: 16014340--16014392 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16014330 CCAGTCCGAT
* *
16014340 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16014366 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16014392 C
1 C
16014393 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16015251 original size:26 final size:26
Alignment explanation
Indices: 16015222--16015274 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16015212 CCGGTCTGAT
*
16015222 CTTAGACTGCGAATGAACTCCGTATG
1 CTTAGACTGCGAATAAACTCCGTATG
*
16015248 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGCGAATAAACTCCGTATG
16015274 C
1 C
16015275 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGCGAATAAACTCCGTATG
Found at i:16017908 original size:26 final size:26
Alignment explanation
Indices: 16017872--16017924 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16017862 CTGGTCCGAT
*
16017872 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16017898 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16017924 C
1 C
16017925 CTAACTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16018799 original size:26 final size:26
Alignment explanation
Indices: 16018763--16018813 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16018753 CTGGTCTGAT
*
16018763 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16018789 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16018814 TCCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16019685 original size:26 final size:26
Alignment explanation
Indices: 16019648--16019726 Score: 122
Period size: 26 Copynumber: 3.0 Consensus size: 26
16019638 CCGATCCGAT
* *
16019648 CTTAGACAGGGAGTGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
*
16019674 CTTAGTCTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
*
16019700 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16019726 C
1 C
16019727 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.25, C:0.18, G:0.28, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:16020063 original size:159 final size:159
Alignment explanation
Indices: 16019700--16020044 Score: 442
Period size: 159 Copynumber: 2.2 Consensus size: 159
16019690 ACTTCGTATG
* * * * *
16019700 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAATGAGCGTGTGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
16019765 CGACCAGAGGGGCGCGATGCACAAGCTGGGGATCGGCCGAGTCCCCCTCTATGTGCTATTGATCC
66 CGACCAAAGGGGCGCGATGCACAAGCTGGGGATCGACCGAGTCCCCCTCTATGTGCTACTGATCC
* ** *** *
16019830 TGCTGTCGCAACCCTCGGTTTGGTCCGAT
131 TACTACCGCAACCCTCGGTCCAGTCCAAT
*
16019859 CTTAGACTGGGAATGAAC-TCTGTATGCCTAAGTCATCCCACGAAACGAGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
16019923 CCGGCCAAAGGGGCGGGATGCGCAAG-TCGGGGATCGACTGGGTCCCCCTCTATGTGCTACTGAT
65 CCGACCAAAGGGGCGCGATGCACAAGCT-GGGGATCGACCGAGTCCCCCTCTATGTGCTACTGAT
*
16019987 CCTACTACCGCAGCCCTCGGTCCAGTCCAAT
129 CCTACTACCGCAACCCTCGGTCCAGTCCAAT
**
16020018 CTTAGACTGTTAATGAACTTCGTATGC
1 CTTAGACTGGGAATGAACTTCGTATGC
16020045 GCAGGCCAAC
Statistics
Matches: 159, Mismatches: 24, Indels: 6
0.84 0.13 0.03
Matches are distributed among these distances:
158 2 0.01
159 155 0.97
160 2 0.01
ACGTcount: A:0.21, C:0.29, G:0.29, T:0.22
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGACCAAAGGGGCGCGATGCACAAGCTGGGGATCGACCGAGTCCCCCTCTATGTGCTACTGATCC
TACTACCGCAACCCTCGGTCCAGTCCAAT
Found at i:16020732 original size:25 final size:26
Alignment explanation
Indices: 16020697--16020748 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
16020687 CTGGTCTGAT
*
16020697 CTTAGATTGGGAACGAACTCC-TATG
1 CTTAGACTGGGAACGAACTCCGTATG
*
16020722 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16020748 C
1 C
16020749 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 19 0.79
26 5 0.21
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16021614 original size:26 final size:26
Alignment explanation
Indices: 16021585--16021637 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16021575 CCGGTCCAAT
* * *
16021585 CTTAGATTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16021611 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16021637 C
1 C
16021638 CTAACTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16022259 original size:892 final size:885
Alignment explanation
Indices: 16020335--16022369 Score: 2987
Period size: 892 Copynumber: 2.3 Consensus size: 885
16020325 GGCCCCAAAC
* *
16020335 TTGGTATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
1 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* * * *
16020400 AAGTGTCTCCATTTCAGACACTTTAATTGTTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
66 AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
*
16020465 TTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
131 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * *
16020529 GCACCCATCGCACATCATGTGCGCACACCCCTCGCCCTCCCCCCGATCGTCAGAACCCCAATGCT
196 GCACCCATCGCACATCATGTGCGCACACCCC-CCCCCGCCCCCCGATCGCCAGAACCCCAATGCT
* * * * ** *
16020594 GTCGGTCAGGTTCTCTGGCGATGGTGTCCCGACAAAGAAAAATATGGCACCAGCACTTGCCCGAG
260 GCCGGTCAGGTTATCCGGCGATGGTGCCCCGACAAAGAAAAATACCGCACCAGCACATGCCCGAG
* **
16020659 CCCAGCATGTGCTGCTGCAACCTTCGGTCTGGTCTGATCTTAGATTGGGAACGAACTCCTATGCT
325 CCCAGCATGTGCTGCTGCAACCTTCGGTCCGGTCCAATCTTAGATTGGGAACGAACTCCTATGCT
* * * * * ** *
16020724 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCGTGCGGGTGCTCAACCG
390 TAGACTGGGAATGAACTCCATATGCCTAACTCAACCCACAAAACGAGCGTACGGGCACTCAACCA
* * * *
16020789 GCCAGAGGGGAGGGATGCGTAAGCCGGGGATCGATCGGGTCCCCCTCTGCGCACTACCAATCTTG
455 GCCAAAGGGGAGGGATGCGCAAGCCGGAGATCGATCGGGTCCCCCTCTGCACACTACCAATCTTG
* * *
16020854 CTGTGGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
520 CTGTGACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * *
16020919 GACGAAACGAGCGGACGGGCTGGCACTACGCCGGCCAAAGAGGCGGGATGCGTAAGTCGTGGATC
585 GACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAAAGAGGCGGGATGCGCAAGCCGTGGATC
* *
16020984 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCTATTTTTCTGG
650 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCATTTTTCTGG
* *
16021049 CTTGTAAACTCATACAATGGTCCCTCAAGCCTTCATGTGAAGTTTCATGACAAGACGACTCGTTT
715 CTTGTAAACTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGACAAGACGACTCATTT
16021114 TCTATTTTTCATGATTTTCGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAG
780 TCTATTTTTCATGATTTTCGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAG
16021179 TTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTG
845 TTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTG
* *
16021220 TTGGCATCCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
1 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* *
16021285 AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAACCTATAAAATCTCAAATGCTCT
66 AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
*
16021350 TTAAGGGGGTATGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
131 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* *
16021415 GCACCCATCGCACATCATGTGCGCACACCCCCCCCCGGCGCCCTTCGATCGCCGGAACCCCAATG
196 GCACCCATCGCACATCATGTGCGCACACCCCCCCCC-GC-CCC-CCGATCGCCAGAACCCCAATG
* * ** *
16021480 CTGCCGGTGAGGTTATCCGGTGATGGTGCCCCTCCAAAGAAAAATGCCGCACCAGCACATGCCCG
258 CTGCCGGTCAGGTTATCCGGCGATGGTGCCCCGACAAAGAAAAATACCGCACCAGCACATGCCCG
** * * *
16021545 ATTCCAGCATGTGCTG-TCGTAACCCTT-GGTCCGGTCCAATCTTAGATTGGTAATGAACTCCGT
323 AGCCCAGCATGTGCTGCT-GCAA-CCTTCGGTCCGGTCCAATCTTAGATTGGGAACGAACTCC-T
* *
16021608 ATGCTTAGACTGGGAATGAACTCCATATGCCTAACTTAACCCACAAAACGAGCGTATGGGCACTC
385 ATGCTTAGACTGGGAATGAACTCCATATGCCTAACTCAACCCACAAAACGAGCGTACGGGCACTC
* * * * * **
16021673 AGCCAGCCAAAGGGGCGGGATGCGCAAGTCGGAGATCGGA-CGGGTCCCCGTCTGCATACTGTC-
450 AACCAGCCAAAGGGGAGGGATGCGCAAGCCGGAGATC-GATCGGGTCCCCCTCTGCACACTACCA
* * *
16021736 AT-TT-CGGTTGCCACAACCTTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
514 ATCTTGCTG-TG--ACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * *
16021799 AAGCCAACCGATGAAACGAGCGGGCGAGCGGGCGGGCATTACGCCGTCCAGAGAGGCGGGATGCG
576 AAGCCAACCGACGAAACGAGC--G-GA-CGGGCGGGCACTACGCCGGCCAAAGAGGCGGGATGCG
*
16021864 CAAGCCGTGTATCGATAGGGTGG-ACGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAA
637 CAAGCCGTGGATCGATAGGGTGGTA-GGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAA
* *
16021928 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTC-AGCCTTCACGTGAAGTTTCATGG
701 TGCCATTTTTCTGGCTTGTAAACTCATACAATGGTCCC-TCAAGCCTTCACGTGAAGTTTCATGA
* * *
16021992 CAAGACGACTCATTTTCTATTTTTCACT-ATTTTTGAAACTTTTTACGGTTTGAGATTTTTT-CA
765 CAAGACGACTCATTTTCTATTTTTCA-TGATTTTCGAAACTTTTTACGGTTCGAGATTTTTTAAA
* * *
16022055 ATTTTTTCAGAAGGAGTTTTGGCCCAAACCTTGGTAGATGTGATCCTTGTATTTTTT
829 ATTTTTTCAGAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * *
16022112 TTTGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTCTACAAGATTTTGTGACCATTTGAAAA
1 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
16022177 AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
66 AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
16022242 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
131 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * * *
16022307 GCACCCATCGCACATCACGTGCGCACACCCCCCCGAC-CCCCCCGATGGTCGGAACCCCAATGC
196 GCACCCATCGCACATCATGTGCGCACACCCCCCC-CCGCCCCCCGATCGCCAGAACCCCAATGC
16022370 CGTTGCGCAC
Statistics
Matches: 1034, Mismatches: 97, Indels: 34
0.89 0.08 0.03
Matches are distributed among these distances:
885 128 0.12
886 92 0.09
887 8 0.01
888 119 0.12
889 194 0.19
890 5 0.00
891 2 0.00
892 278 0.27
893 205 0.20
894 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (885 bp):
TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
AAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
GCACCCATCGCACATCATGTGCGCACACCCCCCCCCGCCCCCCGATCGCCAGAACCCCAATGCTG
CCGGTCAGGTTATCCGGCGATGGTGCCCCGACAAAGAAAAATACCGCACCAGCACATGCCCGAGC
CCAGCATGTGCTGCTGCAACCTTCGGTCCGGTCCAATCTTAGATTGGGAACGAACTCCTATGCTT
AGACTGGGAATGAACTCCATATGCCTAACTCAACCCACAAAACGAGCGTACGGGCACTCAACCAG
CCAAAGGGGAGGGATGCGCAAGCCGGAGATCGATCGGGTCCCCCTCTGCACACTACCAATCTTGC
TGTGACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
ACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCG
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATCCCAATGCCATTTTTCTGGC
TTGTAAACTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTTCATGACAAGACGACTCATTTT
CTATTTTTCATGATTTTCGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGT
TTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTG
Found at i:16022395 original size:47 final size:47
Alignment explanation
Indices: 16022326--16022419 Score: 188
Period size: 47 Copynumber: 2.0 Consensus size: 47
16022316 GCACATCACG
16022326 TGCGCACACCCCCCCGACCCCCCCGATGGTCGGAACCCCAATGCCGT
1 TGCGCACACCCCCCCGACCCCCCCGATGGTCGGAACCCCAATGCCGT
16022373 TGCGCACACCCCCCCGACCCCCCCGATGGTCGGAACCCCAATGCCGT
1 TGCGCACACCCCCCCGACCCCCCCGATGGTCGGAACCCCAATGCCGT
16022420 CGGTCAGGTT
Statistics
Matches: 47, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
47 47 1.00
ACGTcount: A:0.17, C:0.51, G:0.21, T:0.11
Consensus pattern (47 bp):
TGCGCACACCCCCCCGACCCCCCCGATGGTCGGAACCCCAATGCCGT
Found at i:16022550 original size:26 final size:26
Alignment explanation
Indices: 16022521--16022573 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16022511 CCGATCTGAT
16022521 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16022547 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16022573 C
1 C
16022574 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16023159 original size:25 final size:25
Alignment explanation
Indices: 16023113--16023160 Score: 78
Period size: 25 Copynumber: 1.9 Consensus size: 25
16023103 TCCGATCTCA
*
16023113 GACTGGGAATGAACTTCATATGCTT
1 GACTGGGAATGAACTCCATATGCTT
*
16023138 GACTGGGAATGAACTCCGTATGC
1 GACTGGGAATGAACTCCATATGC
16023161 CTAAGTCAAC
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
25 21 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (25 bp):
GACTGGGAATGAACTCCATATGCTT
Found at i:16024180 original size:26 final size:26
Alignment explanation
Indices: 16024144--16024196 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16024134 CTGGTCCAAT
*
16024144 CTTAGATTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
* *
16024170 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16024196 C
1 C
16024197 CGAAGTCAAT
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16024622 original size:366 final size:360
Alignment explanation
Indices: 16023952--16024626 Score: 905
Period size: 366 Copynumber: 1.9 Consensus size: 360
16023942 GGTTTGATGA
* *
16023952 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACAGCCCC
1 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * *
16024017 CCCGATCATCGAAACCCCAATACCGTCGGTCAGGTTCTTCGGTGATTGTTTCCCGATGAAAAAAA
66 CCCCATCATCGAAACCCCAATACCGTCGGTCAGGTTCTTCGGCGATTGGTGCCCGATGAAAAAAA
** * * * * * *
16024082 ATGTGGCACGAGCACATGCTCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCTGGTCCAATCTT
131 ATACGGCACCAGCACATGCCCGAGCCCAACAAGTGCTACCACAACCCTCGGTCCGGTCCAATCTT
* *
16024147 AGATTGGGAACGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCGAAGTCAATCGATG
196 AGATTGGGAACGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCGAAGTCAATCCATG
* * * * *
16024212 AAACGAGCGTGCGGGCGTTCAACCGGCCAGAGGGGTGAGATGCGTAAGCCGAGGATCGGTCGGGT
261 AAACGAACGTGCGGGCGCTAAACCGACCAGAGGGGAGAGATGCGTAAGCCGAGGATCGGTCGGGT
16024277 CCCCCTCTGTGTGCCGTCATGTGCGCACATCATGT
326 CCCCCTCTGTGTGCCGTCATGTGCGCACATCATGT
16024312 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
1 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* *
16024377 CAGCCCCTCGATCGCCAGAACCCCAATGCCGTCGGTCAGGTT-TTCTGGCGA-TGGTGCCCTGGA
66 C--CCCATC-ATCG--A-AACCCCAATACCGTCGGTCAGGTTCTTC-GGCGATTGGTGCCC--GA
*
16024440 -GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACAAGTGCTACCGA-AACCCTCGGTCCG
122 TGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAACAAGTGCTACC-ACAACCCTCGGTCCG
* * * * *
16024503 GTTCGATCTTTGACTT-GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
186 GTCCAATCTTAGA-TTGGGAACGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCGAA
* *
16024567 GTCTAA-CCATGAAATGAACGTGCGGGTGCTAAACCGACCAGAGGGGCAG-GATGCGTAAGC
250 GTC-AATCCATGAAACGAACGTGCGGGCGCTAAACCGACCAGAGGGG-AGAGATGCGTAAGC
16024627 AGGGGATCTG
Statistics
Matches: 271, Mismatches: 31, Indels: 20
0.84 0.10 0.06
Matches are distributed among these distances:
360 64 0.24
362 4 0.01
363 4 0.01
365 10 0.04
366 181 0.67
367 8 0.03
ACGTcount: A:0.25, C:0.28, G:0.27, T:0.19
Consensus pattern (360 bp):
GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
CCCCATCATCGAAACCCCAATACCGTCGGTCAGGTTCTTCGGCGATTGGTGCCCGATGAAAAAAA
ATACGGCACCAGCACATGCCCGAGCCCAACAAGTGCTACCACAACCCTCGGTCCGGTCCAATCTT
AGATTGGGAACGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCGAAGTCAATCCATG
AAACGAACGTGCGGGCGCTAAACCGACCAGAGGGGAGAGATGCGTAAGCCGAGGATCGGTCGGGT
CCCCCTCTGTGTGCCGTCATGTGCGCACATCATGT
Found at i:16025430 original size:26 final size:26
Alignment explanation
Indices: 16025392--16025444 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16025382 CTGGTCCGAT
*
16025392 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTAGGAATGAACTCCCTATG
* *
16025418 CTTATACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCCTATG
16025444 C
1 C
16025445 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCCTATG
Found at i:16026176 original size:26 final size:26
Alignment explanation
Indices: 16026147--16026196 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
16026137 CCGATTCGAT
16026147 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16026173 CTTAGACTGGGAATGAACTTCGTA
1 CTTAGACTGGGAATGAACTCCGTA
16026197 CACCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.18, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16026501 original size:748 final size:746
Alignment explanation
Indices: 16025032--16026525 Score: 1955
Period size: 748 Copynumber: 2.0 Consensus size: 746
16025022 GATCCCTGTA
16025032 TTTTTGTAGGCATGCACAAAAAAATTTCAAGTAAAAACTCAGAGTGTACAAGATTTTGTGACCAT
1 TTTTTGTAGGCATGCACAAAAAAATTTCAAGTAAAAACTCAGAGTGTACAAGATTTTGTGACCAT
* *
16025097 TTGAAAAAAATGTAGCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTAAA
66 TTGAAAAAAATGTACCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTAAA
** **
16025162 ATGCTCTTTAAGGGGGTGTGAGTTCACAAGGTTTGATGAGGGAAAGGGGGACAATATAAGGGCCA
131 ACACTCTTTAAGAAGGTGTGAGTTCACAAGGTTTGATGAGGGAAAGGGGGACAATATAAGGGCCA
* *
16025227 AGTACCAGCACCCATCGCACATCATGTGGCACACCTCCCCCGATCGCAGGAACCCCAATGCCGCC
196 AGTACCAGCACCCATCGCACATCATGTCGCACACCCCCCCCGATCGCAGGAACCCCAATGCCGCC
* **
16025292 GGTCAGGTTCTCCGGCGATGGTGTCCTGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCA
261 GGTCAGGTTCTCCGACGATGGTGTCCTGGCCAAGAAAAATACGACACCAGCACATGCCCGAGCCA
* * * *
16025357 AGCATGTGCTGTTGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCCTATGCTTA
326 AGCATGTGCTGCTGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCCTATGCTTA
* ** * *
16025422 TACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCTTACGGGCGCTCAACCGGC
391 GACTAGGAATGAACTCCGTACACCTAAGTCAACCCACAAAACGAGCTTACGGGCGCACAACCGGC
* *
16025487 CAGAGGGGCGAAATGGGCAAGCCGGGGATCGGTCGGGCCCCTCTCTGCGTGCTGTCGATCTTGCT
456 CAGAGGGGCGAAATGCGCAAGCCGGGGATCGCTCGGGCCCCTCTCTGCGTGCTGTCGA-C-T-CT
* *
16025552 GCCGTAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCTGTATACCTAAGCCAACCGA
518 GCCGTAACCCTCAGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGA
* * * *
16025617 CGAAATGAGCGGGCGGGAGGGTACTACGCCGGCTAGAGAGGTGGGATATGCAAGCCATGGATCGA
583 CGAAATGAGCGGACGGGAGGGCACTACGCCGGCCAGAGAGGTGAGATATGCAAGCCATGGATCGA
* * * ** * * *
16025682 TAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTCGTGCCAATGCCATTTTTCTGGCT
648 TAGAGTAGCAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGACC
16025747 TGTAAATTCATACAATGGTCCCTTAAGCCTTGTT
713 TGTAAATTCATACAATGGTCCCTTAAGCCTTGTT
* * **
16025781 TTTTTGTTGGCATGGATGAAAAAA-TTC-AGCTAAAAACTC-GAAGTGTACAAGATTTTGTGACC
1 TTTTTGTAGGCATGCACAAAAAAATTTCAAG-TAAAAACTCAG-AGTGTACAAGATTTTGTGACC
* * *
16025843 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTC
64 ATTTGAAAAAAATGTACCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTA
** * * * * *
16025908 AAACACTCTTTAAGAAGGTGTGAGTTTTCGAGGTTTGATGAGGTATAGGGGGCCCATATAAGGGC
129 AAACACTCTTTAAGAAGGTGTGAGTTCACAAGGTTTGATGAGGGAAAGGGGGACAATATAAGGGC
*
16025973 CAAGTACCAG-ACCCATCGCACATCATGTACGCACATCCCCCGGCCCCCCCGATCATC-GGAACC
194 CAAGTACCAGCACCCATCGCACATCATGT-CGCACA-----C--CCCCCCCGATC-GCAGGAACC
* *
16026036 CCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCTGGCCAAGAAAAATGCGGCACCAGCACA
250 CCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCTGGCCAAGAAAAATACGACACCAGCACA
* * * *
16026101 TGCCTGAGCCCAGCATGTGCTGCTGTAACCCTCGGTCCGATTCGATCTTAGACTGGGAATGAACT
315 TGCCCGAGCCAAGCATGTGCTGCTGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* * * *
16026166 CCGTATGCTTAGACTGGGAATGAACTTCGTACACCTAAGTCAACCCACAAAACGAG-TGTGCGGG
380 CCCTATGCTTAGACTAGGAATGAACTCCGTACACCTAAGTCAACCCACAAAACGAGCT-TAC-GG
* * * *
16026230 GGGCACAATCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGATCGACT-GGG-TCCTC-CT-C-TG
443 GCGCACAACCGGCCAGAGGGGCGAAATGCGCAAGCCGGGGATCG-CTCGGGCCCCTCTCTGCGTG
** * * *
16026290 -TGT-G-C-C-GTTGTAACCCTCGGTCCGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCT
507 CTGTCGACTCTGCCGTAACCCTCAGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATACCT
* * *
16026350 AAGCCAACCGACGAAAAGAGTGGGCGGACGGGCGGGCACTACGTCGGCCAGAGA-GTCGAG-T-T
572 AAGCCAACCGACG--AA-A-TGAGCGGACGGGAGGGCACTACGCCGGCCAGAGAGGT-GAGATAT
* * *
16026412 GCGGAAGCCGTGGATTGATAGAGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCC
632 GC--AAGCCATGGATCGATAGAGTAGCAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCC
16026477 AATGCCATTTTTCTGACCTGTAAATTCATACAATGGTCCCTTAAGCCTT
695 AATGCCATTTTTCTGACCTGTAAATTCATACAATGGTCCCTTAAGCCTT
16026526 CATGTGAAGT
Statistics
Matches: 648, Mismatches: 76, Indels: 43
0.84 0.10 0.06
Matches are distributed among these distances:
744 60 0.09
745 1 0.00
746 5 0.01
747 25 0.04
748 292 0.45
749 20 0.03
750 1 0.00
751 3 0.00
752 2 0.00
753 2 0.00
754 3 0.00
755 188 0.29
756 45 0.07
757 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.26, T:0.24
Consensus pattern (746 bp):
TTTTTGTAGGCATGCACAAAAAAATTTCAAGTAAAAACTCAGAGTGTACAAGATTTTGTGACCAT
TTGAAAAAAATGTACCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTAAA
ACACTCTTTAAGAAGGTGTGAGTTCACAAGGTTTGATGAGGGAAAGGGGGACAATATAAGGGCCA
AGTACCAGCACCCATCGCACATCATGTCGCACACCCCCCCCGATCGCAGGAACCCCAATGCCGCC
GGTCAGGTTCTCCGACGATGGTGTCCTGGCCAAGAAAAATACGACACCAGCACATGCCCGAGCCA
AGCATGTGCTGCTGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCCTATGCTTA
GACTAGGAATGAACTCCGTACACCTAAGTCAACCCACAAAACGAGCTTACGGGCGCACAACCGGC
CAGAGGGGCGAAATGCGCAAGCCGGGGATCGCTCGGGCCCCTCTCTGCGTGCTGTCGACTCTGCC
GTAACCCTCAGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGA
AATGAGCGGACGGGAGGGCACTACGCCGGCCAGAGAGGTGAGATATGCAAGCCATGGATCGATAG
AGTAGCAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGACCTGT
AAATTCATACAATGGTCCCTTAAGCCTTGTT
Found at i:16027057 original size:26 final size:26
Alignment explanation
Indices: 16027028--16027080 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16027018 CCAGTCCGAT
*
16027028 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16027054 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16027080 C
1 C
16027081 CTAAGTCATC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16027359 original size:155 final size:157
Alignment explanation
Indices: 16027054--16027606 Score: 378
Period size: 155 Copynumber: 3.5 Consensus size: 157
16027044 ACTCCGTATG
* * * * * *
16027054 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCATCCCATGAAATGAGCGTGCGGCCGCTCAGC
1 CTTAGACT--GAAGGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCACTCAGC
* * * * *
16027119 CGGCTAGAGGGGTGGGATGCGTAAGCTGGGGATCGGCCAGGTCCCCCTCTGTGTGCTGCCGATCT
64 CGGCCAGAGGGGCGGGATGCATAAGCAGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCT
* * * *
16027184 TACTGGCGCAACACTTGGTCTGGT-TCGAT
129 TACTGCCACAACACTCGGTCTGATCT-GAT
* * * * **
16027213 CTTAGA-T-TAGGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGTGGGCACTTGGCCG
1 CTTAGACTGAAGGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCACTCAGCCG
* * *
16027276 GCCAGATGGGCGGGATGCATAAGCCAGGGG-TCGGCCAGGTCCCCCTTTGCGTGCTGCTGATCTT
66 GCCAGAGGGGCGGGATGCATAAG-CAGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCTT
** *
16027340 GTTGCCACAACCCTCGGTCTGATCTGAT
130 ACTGCCACAACACTCGGTCTGATCTGAT
* * * * *
16027368 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAA--A-CGGGCGGGCACT-ACG
1 CTTAGACT--GAAGGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCACTCA-G
* * * *** * * * * *
16027428 CCAGCCAGAGGGGCAGAATGTGCAAGCCGGCGATTGGCC-GAGTCCCCCTCTGCATGCTGTCGAT
63 CCGGCCAGAGGGGCGGGATGCATAAGCAGGGGATCGGCCAG-GTCCCCCTCTGCGTGCTGCCGAT
* * ** * *
16027492 CCTGCTGCTGCAACCCTCGGTC-CAGTCTGAT
127 CTTACTGCCACAACACTCGGTCTGA-TCTGAT
* * * * * * *
16027523 CTTAGACTGGGAATGAACTCCATATACCTAAGCCAACCAACGAAACGATCGGGCGAG-CACT-AC
1 CTTAGACT--GAAGGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG-GCCACTCA-
*
16027586 GCCGG-CAGAGAGGCGGGATGC
62 GCCGGCCAGAGGGGCGGGATGC
16027607 GCAAGCCGTG
Statistics
Matches: 317, Mismatches: 62, Indels: 31
0.77 0.15 0.08
Matches are distributed among these distances:
154 6 0.02
155 234 0.74
156 11 0.03
158 17 0.05
159 48 0.15
160 1 0.00
ACGTcount: A:0.22, C:0.28, G:0.30, T:0.20
Consensus pattern (157 bp):
CTTAGACTGAAGGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCACTCAGCCG
GCCAGAGGGGCGGGATGCATAAGCAGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCTTA
CTGCCACAACACTCGGTCTGATCTGAT
Found at i:16028253 original size:26 final size:26
Alignment explanation
Indices: 16028217--16028269 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16028207 CTAGTCCGAT
*
16028217 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16028243 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16028269 C
1 C
16028270 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16030135 original size:16 final size:16
Alignment explanation
Indices: 16030111--16030173 Score: 56
Period size: 16 Copynumber: 3.9 Consensus size: 16
16030101 GGATTTTTTT
*
16030111 AGGACTTTGGATTTCA
1 AGGATTTTGGATTTCA
*
16030127 AGGATTTTGGATTTCGG
1 AGGATTTTGGATTTC-A
* * *
16030144 GGGGTTTTCGATTT-A
1 AGGATTTTGGATTTCA
16030159 ATGGATTTTGGATTT
1 A-GGATTTTGGATTT
16030174 TTAGGGGTTT
Statistics
Matches: 36, Mismatches: 9, Indels: 4
0.73 0.18 0.08
Matches are distributed among these distances:
16 25 0.69
17 11 0.31
ACGTcount: A:0.19, C:0.06, G:0.30, T:0.44
Consensus pattern (16 bp):
AGGATTTTGGATTTCA
Found at i:16030181 original size:33 final size:33
Alignment explanation
Indices: 16030120--16030184 Score: 87
Period size: 33 Copynumber: 2.0 Consensus size: 33
16030110 TAGGACTTTG
*
16030120 GATTTCAAGGATTTTGGATTTCGGGGGGTTTTC
1 GATTTCAAGGATTTTGGATTTCGAGGGGTTTTC
**
16030153 GATTT-AATGGATTTTGGATTTTTAGGGGTTTT
1 GATTTCAA-GGATTTTGGATTTCGAGGGGTTTT
16030185 AGAATCCTAG
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
32 2 0.07
33 26 0.93
ACGTcount: A:0.17, C:0.05, G:0.31, T:0.48
Consensus pattern (33 bp):
GATTTCAAGGATTTTGGATTTCGAGGGGTTTTC
Found at i:16031347 original size:23 final size:21
Alignment explanation
Indices: 16031302--16031355 Score: 65
Period size: 23 Copynumber: 2.5 Consensus size: 21
16031292 GGACTGTGTA
*
16031302 TTTTTTTATTTTTGTTTCTGT
1 TTTTTTTTTTTTTGTTTCTGT
*
16031323 TTTGGTTTTTTTTTTGTTT-TGG
1 TTT--TTTTTTTTTTGTTTCTGT
16031345 TTTTTTTTTTT
1 TTTTTTTTTTT
16031356 ACGTCGAAAA
Statistics
Matches: 29, Mismatches: 2, Indels: 5
0.81 0.06 0.14
Matches are distributed among these distances:
20 8 0.28
21 3 0.10
22 5 0.17
23 13 0.45
ACGTcount: A:0.02, C:0.02, G:0.13, T:0.83
Consensus pattern (21 bp):
TTTTTTTTTTTTTGTTTCTGT
Found at i:16031349 original size:17 final size:17
Alignment explanation
Indices: 16031310--16031354 Score: 72
Period size: 17 Copynumber: 2.6 Consensus size: 17
16031300 TATTTTTTTA
*
16031310 TTTTTGTTTCTGTTTTGG
1 TTTTT-TTTTTGTTTTGG
16031328 TTTTTTTTTTGTTTTGG
1 TTTTTTTTTTGTTTTGG
16031345 TTTTTTTTTT
1 TTTTTTTTTT
16031355 TACGTCGAAA
Statistics
Matches: 26, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
17 21 0.81
18 5 0.19
ACGTcount: A:0.00, C:0.02, G:0.16, T:0.82
Consensus pattern (17 bp):
TTTTTTTTTTGTTTTGG
Found at i:16031881 original size:49 final size:49
Alignment explanation
Indices: 16031808--16032299 Score: 541
Period size: 49 Copynumber: 10.0 Consensus size: 49
16031798 TGGTTTTACA
* * *
16031808 GAAAAGAGCTCCTCTTAATAGAGGCTCAACAACTTTAAAAATCTCATCTG
1 GAAAA-AGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTG
* *
16031858 GAAAAAGCTTCTCTCAATAGAGGCTCCACAACTTTAAAAATCTCATCTG
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTG
* * ** *
16031907 G-AAAAGCCCCTTTCATGAGAGGCTCAACAACTTT-AAAATCTCATCTG
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTG
16031954 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTT-AAAATCTCATCTCG
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCT-G
* * * * *
16032003 AAAAAAAAAGCTCCTCTCAGCAAAGGCTCCACAACTTAAAAAATTCTC-TCTT
1 ---GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTG
** * * ** *
16032055 GAAAAAAATTCTCTTAGTAGAGGTTCCACAACTTTAAAAATCTCATCTG
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTG
* *
16032104 G-AAAAGCTCCTCTCAACAGAGGCTCCATAACTTTAAAAATTCTC-TCTT
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTG
* * *
16032152 GAAAAAGCTCCTCTCAACAAAGGCTCGACAACTTTAAAATTCTCATCTTG
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATC-TG
* *
16032202 GAAAAA-CTCCTCTTAACAGAGGCTCAACAACTTTAAAAATTCTCATCT-
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTG
* * * *
16032250 GAAAAAGCTCATCTCAATAGAGGCTCCATAACTTTAAAATTTCTCATCTG
1 GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAA-ATCTCATCTG
16032300 TTTTCAAATT
Statistics
Matches: 373, Mismatches: 53, Indels: 32
0.81 0.12 0.07
Matches are distributed among these distances:
47 14 0.04
48 115 0.31
49 183 0.49
50 19 0.05
52 31 0.08
53 7 0.02
54 4 0.01
ACGTcount: A:0.37, C:0.25, G:0.12, T:0.27
Consensus pattern (49 bp):
GAAAAAGCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTG
Found at i:16042918 original size:7 final size:7
Alignment explanation
Indices: 16042906--16042931 Score: 52
Period size: 7 Copynumber: 3.7 Consensus size: 7
16042896 CTAGTAAGGC
16042906 TCCTCGA
1 TCCTCGA
16042913 TCCTCGA
1 TCCTCGA
16042920 TCCTCGA
1 TCCTCGA
16042927 TCCTC
1 TCCTC
16042932 ACCCATTACA
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
7 19 1.00
ACGTcount: A:0.12, C:0.46, G:0.12, T:0.31
Consensus pattern (7 bp):
TCCTCGA
Found at i:16044335 original size:16 final size:16
Alignment explanation
Indices: 16044311--16044373 Score: 56
Period size: 16 Copynumber: 3.9 Consensus size: 16
16044301 GGATTTTTTT
*
16044311 AGGACTTTGGATTTCA
1 AGGATTTTGGATTTCA
*
16044327 AGGATTTTGGATTTCGG
1 AGGATTTTGGATTTC-A
* * *
16044344 GGGGTTTTCGATTT-A
1 AGGATTTTGGATTTCA
16044359 ATGGATTTTGGATTT
1 A-GGATTTTGGATTT
16044374 TTAGGGGTTT
Statistics
Matches: 36, Mismatches: 9, Indels: 4
0.73 0.18 0.08
Matches are distributed among these distances:
16 25 0.69
17 11 0.31
ACGTcount: A:0.19, C:0.06, G:0.30, T:0.44
Consensus pattern (16 bp):
AGGATTTTGGATTTCA
Found at i:16044381 original size:33 final size:33
Alignment explanation
Indices: 16044320--16044384 Score: 87
Period size: 33 Copynumber: 2.0 Consensus size: 33
16044310 TAGGACTTTG
*
16044320 GATTTCAAGGATTTTGGATTTCGGGGGGTTTTC
1 GATTTCAAGGATTTTGGATTTCGAGGGGTTTTC
**
16044353 GATTT-AATGGATTTTGGATTTTTAGGGGTTTT
1 GATTTCAA-GGATTTTGGATTTCGAGGGGTTTT
16044385 AGAATCCTAG
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
32 2 0.07
33 26 0.93
ACGTcount: A:0.17, C:0.05, G:0.31, T:0.48
Consensus pattern (33 bp):
GATTTCAAGGATTTTGGATTTCGAGGGGTTTTC
Found at i:16045462 original size:6 final size:6
Alignment explanation
Indices: 16045447--16045498 Score: 54
Period size: 6 Copynumber: 9.0 Consensus size: 6
16045437 ACTGTGTATT
* * * *
16045447 TTTTTA TTTTTG TTTTTG -TTTTA TTTTT- TTTTTG TTTTGG TTTTTT
1 TTTTTG TTTTTG TTTTTG TTTTTG TTTTTG TTTTTG TTTTTG TTTTTG
16045493 TTTTTG
1 TTTTTG
16045499 CTTCGAAAAT
Statistics
Matches: 38, Mismatches: 6, Indels: 4
0.79 0.12 0.08
Matches are distributed among these distances:
5 9 0.24
6 29 0.76
ACGTcount: A:0.04, C:0.00, G:0.12, T:0.85
Consensus pattern (6 bp):
TTTTTG
Found at i:16045470 original size:17 final size:16
Alignment explanation
Indices: 16045448--16045496 Score: 71
Period size: 17 Copynumber: 2.9 Consensus size: 16
16045438 CTGTGTATTT
16045448 TTTTATTTTTGTTTTTG
1 TTTTATTTTT-TTTTTG
16045465 TTTTATTTTTTTTTTG
1 TTTTATTTTTTTTTTG
*
16045481 TTTTGGTTTTTTTTTT
1 TTTT-ATTTTTTTTTT
16045497 TGCTTCGAAA
Statistics
Matches: 30, Mismatches: 1, Indels: 2
0.91 0.03 0.06
Matches are distributed among these distances:
16 10 0.33
17 20 0.67
ACGTcount: A:0.04, C:0.00, G:0.10, T:0.86
Consensus pattern (16 bp):
TTTTATTTTTTTTTTG
Found at i:16045478 original size:22 final size:21
Alignment explanation
Indices: 16045445--16045497 Score: 79
Period size: 22 Copynumber: 2.5 Consensus size: 21
16045435 GGACTGTGTA
* *
16045445 TTTTTTTATTTTTGTTTTTGT
1 TTTTTTTTTTTTTGTTTTGGT
16045466 TTTATTTTTTTTTTGTTTTGGT
1 TTT-TTTTTTTTTTGTTTTGGT
16045488 TTTTTTTTTT
1 TTTTTTTTTT
16045498 GCTTCGAAAA
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
21 10 0.34
22 19 0.66
ACGTcount: A:0.04, C:0.00, G:0.09, T:0.87
Consensus pattern (21 bp):
TTTTTTTTTTTTTGTTTTGGT
Found at i:16045677 original size:12 final size:12
Alignment explanation
Indices: 16045662--16045741 Score: 63
Period size: 12 Copynumber: 6.7 Consensus size: 12
16045652 ATAGGGTGGC
*
16045662 TGGTCGGGTAGT
1 TGGTCGGGTAAT
**
16045674 TGGTAAGGTAAT
1 TGGTCGGGTAAT
* *
16045686 TGGTCAGAG-AGT
1 TGGTC-GGGTAAT
*
16045698 TGGTTGGGTAAT
1 TGGTCGGGTAAT
* *
16045710 TGGTCGGGGAGT
1 TGGTCGGGTAAT
*
16045722 TGGTTGGGTAAT
1 TGGTCGGGTAAT
16045734 TGGTCGGG
1 TGGTCGGG
16045742 GCAGCTCGAC
Statistics
Matches: 49, Mismatches: 17, Indels: 4
0.70 0.24 0.06
Matches are distributed among these distances:
11 2 0.04
12 46 0.94
13 1 0.02
ACGTcount: A:0.16, C:0.05, G:0.46, T:0.33
Consensus pattern (12 bp):
TGGTCGGGTAAT
Found at i:16045742 original size:24 final size:24
Alignment explanation
Indices: 16045662--16045742 Score: 117
Period size: 24 Copynumber: 3.4 Consensus size: 24
16045652 ATAGGGTGGC
* **
16045662 TGGTCGGGTAGTTGGTAAGGTAAT
1 TGGTCGGGGAGTTGGTTGGGTAAT
* *
16045686 TGGTCAGAGAGTTGGTTGGGTAAT
1 TGGTCGGGGAGTTGGTTGGGTAAT
16045710 TGGTCGGGGAGTTGGTTGGGTAAT
1 TGGTCGGGGAGTTGGTTGGGTAAT
16045734 TGGTCGGGG
1 TGGTCGGGG
16045743 CAGCTCGACG
Statistics
Matches: 50, Mismatches: 7, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
24 50 1.00
ACGTcount: A:0.16, C:0.05, G:0.47, T:0.32
Consensus pattern (24 bp):
TGGTCGGGGAGTTGGTTGGGTAAT
Found at i:16046787 original size:26 final size:26
Alignment explanation
Indices: 16046757--16046835 Score: 158
Period size: 26 Copynumber: 3.0 Consensus size: 26
16046747 CCGGTCCGAT
16046757 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16046783 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16046809 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16046835 C
1 C
16046836 CTAAGTCAAC
Statistics
Matches: 53, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 53 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16047700 original size:26 final size:26
Alignment explanation
Indices: 16047671--16047723 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16047661 CCGATCTGAT
* * * *
16047671 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGCGAACGAACTCCGTATG
16047697 CTTAGACTGCGAACGAACTCCGTATG
1 CTTAGACTGCGAACGAACTCCGTATG
16047723 C
1 C
16047724 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGCGAACGAACTCCGTATG
Found at i:16048545 original size:888 final size:890
Alignment explanation
Indices: 16045890--16051195 Score: 6996
Period size: 914 Copynumber: 5.9 Consensus size: 890
16045880 GTCTACACCA
* *
16045890 TATGCTTAGA-TGGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGACGC
1 TATGCTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * *
16045954 TCAGCTGGCTAGAGGGGCGGGATGCGTAAGCCGGGGATCAACCGAGTCCCACTCTGCGTGCTGCC
65 TCAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * *
16046019 GATCTTGTTGCCGCAACCCTCAGTCTGATCCTATCTTAGACTGGGAATGAACTCCGTATGCCTAA
130 GATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * ** ** *
16046084 GCCAACTGACAAAAAGAGCGCACGGAAAGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCA
195 GCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCA
* * *
16046149 AGCCGTGGATCGATAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTATGCCGTGCCAAT-C
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGC
*
16046213 CATTTTTCTGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
325 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
**
16046278 ACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTC-AGGATTTTTTAAAATTT
390 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTT
* *
16046342 TTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCAAGCACA
454 TTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * *
16046407 AAAAAATTCAGCTAAAAAATTGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTTCCCAT
519 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
16046472 TTCAGACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGT
584 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
16046537 GAGTTCT-ATAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGT
649 GAGTTCTCA-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
16046601 ACATCATGTGCGCACACCCCCACCAGCCCCCCC-ATCGACGGAACCCCAA-ATCCGTCGGTCAGG
713 ACATCATGTGCGCACA-CCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGTCGGTCGGTCAGG
* * * * * *
16046664 TTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCAGCAGCAAATGCTCGAGCCCAGCACGT
776 TTCTCCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
*
16046729 GCTACCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
841 GCTACCGCAA--C-C-CT-C-G---G-TC-----C---G-AT---CT--G-AT-CTTAGATTGGG
*
16046794 AATGAACTCCG
880 AATGAACTCTG
* * *
16046805 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTACGAAATGAACGTGCGGGCGCT
1 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * * * * **
16046870 CAGCCAGCCAGAGGGGCGGCATGCACAAGCTGGGGATCGACCGGGTCCCCC-CTGTGTGCTGTTG
66 CAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCG
* * * * * *
16046934 ATCCTACTGCCACAACCCTCGGTCCGGTTCGATCTTAGATTGAGAATGAACTCCGTATGCCTAAG
131 ATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * **
16046999 CCAACCGATGAAACCAGCGGGCGGGCAGGCGGGCACTACGCCAGCCAGAGAGGCTTGATGCGCAA
196 CCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
16047064 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
* * * *
16047129 ATTTTTTTGGCTTTGTAAATTCATACAATGGTCCTTTAAGCCTTCATGTGAAATTTCATAGCAAG
326 ATTTTTCTGGC-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* * *
16047194 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTT
390 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * *
16047259 TTCAGAAGGATTTTTTGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTAGGCATGCACAA
455 TTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
16047324 AAAATTTCAGCTAAAAACTCGAAGTGTACAAGATCTTGTGACCATTTGAAAAAAGTGTCACCATT
520 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * *
16047389 TCAAACACTTTAATGGCTACTGGAAGCAAACCAGTAAAATCTCAAATGCTCTTTCAGGGGGTGTG
585 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
16047454 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCAC
650 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * *
16047519 ATCATGTGCACACACCCCCTGG-CCCCCCGATCGCCGAAACCCCAAT-ACCGCCGGTCAGGTTCT
715 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGTCGGTCGGTCAGGTTCT
* * * **
16047582 CCGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCAAGCATAGCATGTGCTA
780 CCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTA
*
16047647 CCACAACCCTCGGTCCGATCTGATCTTAGATTGGGAATGAACTCTG
845 CCGCAACCCTCGGTCCGATCTGATCTTAGATTGGGAATGAACTCTG
* * * *
16047693 TATGCTTAGACTGCGAACGAACTCCGTATGCCTAAGTCAACCCATGAAAC-AGGGGTGCGGGCGC
1 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA-GCGTGCGGGCGC
* * * * *
16047757 TCAGCCGGCCA-AAGGGCAGGGATACGCAAGCCGGGGATCGATCGGGTCCCCCTCTACATGCTAC
65 TCAGCCGGCCAGAAGGGC-GGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGC
* * * * *
16047821 CGATCCTACTGCCGTAACCCTTGGTTTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
129 CGATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
16047886 AGCCAACCGACGAAACGAACGGGCTGGCGGGCGGGCACTACGCCGGCCAGAAAGGCGGGATGCAC
194 AGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGC
***
16047951 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTTGTGCCAATG
259 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
16048016 CCA-TTTTCTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
324 CCATTTTTC-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* *
16048080 AGACGACTCGTTTTCGATTTTTCATGATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAAAT
388 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAAAT
* * *
16048145 TTTTT-AGAAGGATTTTTGGCCCTAAACTTGGTAGACATGATCCTTGTATTTTTATTGGCATGCA
452 TTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
16048209 CACAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCC
517 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
16048274 ATTTCAGACA-TTTCAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGG
582 ATTTCAGACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
16048338 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGG-CAAGTACCAGCACCCAT
646 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAG-GGCCAAGTACCAGCACCCAT
* *
16048402 CGCACATCAT-TGTGCACACCACCCCGGCACCCCCGATCGCCGGAACCCCAATGTCGGT-GGTCA
710 CGCACATCATGTGCGCACACC-CCCCGGCCCCCCCGATCGCCGGAACCCCAATGTCGGTCGGTCA
* *
16048465 GGTTCTCTGACGATAGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
774 GGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
*
16048530 GTGCT-CCGGAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTG
839 GTGCTACCGCAA-CC-C--T-C-G---G-TC-----C---G-AT---CT--G-AT-CTTAGATTG
16048594 GGAATGAACTCTG
878 GGAATGAACTCTG
* *
16048607 TATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCT
1 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * * * ** *
16048672 CAGTCGGCCAG-AGGGACGGGATGTGCAAGGCAGAGATCGGTCGGGTCCCCCTCTGCGTGCGGCC
66 CAGCCGGCCAGAAGGG-CGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * **
16048736 AATCCTGCGGCCGCAACCCTCGGT-TCGGTCCGATCTTAGACTGGGAATGAACTCCACATGCCTA
130 GATCCTGCTGCCGCAACCCTCGGTCT-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * ***
16048800 AGCCAACCGACGAAACGAACGGGCGGGCAAGCGGGAACTACGCCAGCCAGAAAGGAAAGATGCGC
194 AGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGC
* *
16048865 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATATCCGCCATGCCAATG
259 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
*
16048930 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCGTCATGTGAAGTTTCATGGCAA
324 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* * *
16048995 GACTACTCGTTTTTTATTTTTCATGATTTTTGAAAC-TTTTACGATTCGAGATTTTTTAAAATTT
389 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTT
* * * * * *
16049059 TTTCAGAAAGAGTTTTGGCTCCAAATTTGGTAGACTTGATCCTTGTATTTTTGTTGGCATGCATA
454 TTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * **
16049124 AAACAATTCCGCTAAAAACTCGAAGACTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
519 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
16049189 TTCTGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
584 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * * *
16049254 GAGTTTTCGAGGTTTGATAAGGGATAGGGGGCCAATATATGGGCCAAGTACCAGCACCCATCCCA
649 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * *
16049319 CATCATGTGTGCACACCCCCCGACCCCTCCCGATC-CCTGGAACCCCAATGT-TGTCGGTCAGGT
714 CATCATGTGCGCACACCCCCCGGCCCC-CCCGATCGCC-GGAACCCCAATGTCGGTCGGTCAGGT
** * * * * * * *
16049382 TCTCCGGTGATGATGTCTCGACGAAGAAAAATGAGGCACCAACACATGCTCGAGCCCAGTATGTG
777 TCTCCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* *
16049447 CTGCCGTAACCCTC-G---G-TC----C---------G---G---TCTG
842 CTACCGCAACCCTCGGTCCGATCTGATCTTAGATTGGGAATGAACTCTG
*
16049472 -AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCT
1 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * * * **
16049535 CAGTCTGCTA-AAGGGGCAGGATACGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCC
66 CAGCCGGCCAGAA-GGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * *
16049599 GATCCTGCTACCGCAACCCTCAGTCTGGTCCTATCTTAGACCGGGAATGAACTCCGTATACCTAA
130 GATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *
16049664 GCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCCCA
195 GCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCA
*
16049729 AGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGC
* * *
16049794 CATTTTTCTGGGTTGTAAATTCATACAATGATCCCTTCAGCCTTCATGTGAAGTTTCATGGCAAG
325 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* *
16049859 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTGTTACGGTTCGAGATTTTTTAAAATTTT
390 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * * * **
16049924 TTCAGATGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTTTTACCATGCACAA
455 TTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * *
16049989 AAAAATTCAGCTAAAAAATTGGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTTTCCCCATT
520 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
16050054 TCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
585 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
** *
16050119 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACCAGCACCCATCGCAC
650 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
16050184 ATCATGTGCGCACACCCCCTCGGCCCCCCACGATCGTCGGAACCCCAATG-CCGTCGGTCAGGTT
715 ATCATGTGCGCACACCCCC-CGGCCCCCC-CGATCGCCGGAACCCCAATGTCGGTCGGTCAGGTT
* * * * *
16050248 CTCCGGCGATGGTGTCCC-AGTAAAGAAAAATGCGGCACCAACACATGGCCGAGCCAAGCATGTG
778 CTCCGACGATGGTGTCCCGA-TGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * * *
16050312 CTGCCACAACCCTCGGTCCGGTCTGATCTTA-CTCTAGGAATGAACTCCG
842 CTACCGCAACCCTCGGTCCGATCTGATCTTAGAT-TGGGAATGAACTCTG
* * * *
16050361 TTTGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGTGCT
1 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * * * *
16050426 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCAACCGGGTCCCCCTCTGCATTCTGCCT
66 CAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCG
** *
16050491 ATCCTGCTGCCGCAACCCTCGGTCTGGTCTAATCGTAGACTGGGAATGAACTCCGTATGCCTAAG
131 ATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
16050556 CCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGGCGGGATGC
196 CCAACCGACGAAACGAGCGGGCGGGCAGGC--G-G-GCACTACGCCGGCCAGAGAGGCGGGATGC
* ** *
16050621 GAAAGCCGTGGATCGATATTGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAA
257 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAA
16050686 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
322 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
* * *
16050751 AAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTTAAAT
387 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAT
* *
16050816 TTTTTCAGAAGGAGTTTTT-GCCCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCTTGC
452 TTTTTCAGAAGGA-TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * *
16050880 ACAAAAAAATTCAGCTAAAATCTTGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCC
516 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
16050945 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
581 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
16051010 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
646 TGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
** * * * *
16051075 GCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTGGGAACCCCAAT-ACTGCCGGACAGG
711 GCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGTCGGTCGGTCAGG
* * * *
16051139 TTCTCCGACGATGGTGTCTCGATGAAGAAAAATACGGCACCAGCACATACTCGAGCC
776 TTCTCCGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
16051196 GACCAGAGAG
Statistics
Matches: 3883, Mismatches: 409, Indels: 220
0.86 0.09 0.05
Matches are distributed among these distances:
863 371 0.10
864 288 0.07
865 103 0.03
866 2 0.00
868 1 0.00
869 1 0.00
870 2 0.00
871 1 0.00
874 1 0.00
880 1 0.00
883 1 0.00
886 1 0.00
887 17 0.00
888 472 0.12
889 294 0.08
890 5 0.00
891 197 0.05
892 4 0.00
893 77 0.02
894 12 0.00
895 473 0.12
896 5 0.00
897 1 0.00
898 2 0.00
899 1 0.00
903 1 0.00
904 2 0.00
905 2 0.00
906 1 0.00
907 2 0.00
908 1 0.00
909 1 0.00
910 5 0.00
911 2 0.00
912 14 0.00
913 275 0.07
914 754 0.19
915 129 0.03
916 360 0.09
917 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
CAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCG
ATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
CCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
TCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
TCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGTCGGTCGGTCAGGTTCTC
CGACGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTAC
CGCAACCCTCGGTCCGATCTGATCTTAGATTGGGAATGAACTCTG
Found at i:16048595 original size:26 final size:26
Alignment explanation
Indices: 16048559--16048637 Score: 131
Period size: 26 Copynumber: 3.0 Consensus size: 26
16048549 CCAGTCTGAT
16048559 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
16048585 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16048611 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16048637 C
1 C
16048638 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.28, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16053419 original size:26 final size:26
Alignment explanation
Indices: 16053383--16053435 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16053373 ATGGTCCAAT
*
16053383 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16053409 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16053435 C
1 C
16053436 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16055457 original size:893 final size:890
Alignment explanation
Indices: 16052655--16056192 Score: 5111
Period size: 895 Copynumber: 4.0 Consensus size: 890
16052645 TGTGCAACCG
* * * * *
16052655 CAACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTACGCCTAAGTCAACCCACGAA
1 CAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
16052720 ACGAGCGGGCGGGCAGGCGGGCACTACGCCAGCCATAAAGGCAGGATGCGCAAGCCGTGGATCGA
66 ACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* ** *
16052785 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCTAATGATATTTTTATGGCT
131 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCT
16052850 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
196 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * **
16052915 TATTTTTCAGGATTTTCAAAACTTTTTACTGTTCAGGATTTTTTAAAATTTTTTCAGAATTAGTT
261 TATTTTTCAAGATTTTCGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
*
16052980 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
326 TTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
16053045 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAA
391 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAA
* *
16053110 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT-TTTCAAGGGGGTGTGAGTTCCCAAGGT
456 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGT
* *
16053174 TTGATGAGGGATAGGGGACCAATATAAGGGTCAAGTACCAGCACCCATCGCACATCATGTGCGCA
520 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * * * *
16053239 CACCCCCCCCGGACCTCGCCGATCGACA-GAAACCCAATGCCGCCGGTCAGGTTCTCCGACGATG
585 CA-CCACCCCGGCCCCCCCCGATCGTCAGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * * * * * *
16053303 GTGTCCCGGCGAAGGAAAATGCGGAACCAGCAAATGCTCGAGCCCAACATGTGCTACCGCAACCC
649 GTGTCCCGACAAAGAAAAATGCGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
** *
16053368 TCGA-AATGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCAT
714 TCGATCCT-GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCAT
* *
16053432 ATGCCTAAGTCAACCCAAGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCA
778 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * *
16053497 AGTCGGTGATTGGTCGAGTCCCCCTC-T-A-CGTGCCATCGATCCTGCTACCT
843 AGCCGGGGATTGGTCG-GTCCCCCTCTTGATC-TGCC-T--ATCCTGCTACCA
***
16053547 CAACCCTCGATCCAAACTG-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
1 CAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * *
16053611 ACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGAATGCACAAGCCGTGGA
66 ACGA----GCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
* * * * *
16053676 ACGATGGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCT
127 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTT
*
16053741 GGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
192 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
* *
16053806 TTTCTATTTTTCATGATTTTCGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCAAAAG
257 TTTCTATTTTTCAAGATTTTCGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAG
* * * * *
16053870 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTATTGGCATGCATAAAATAATTC
321 GAGTTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
*
16053935 AGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACAC
386 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACAC
*
16054000 TTTAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
451 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
16054065 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
516 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * * * *
16054130 CGCACACCAACCCAGGCCCCTCTCGATCATC-GGAACCCCAATGCCGTCGGTCAGGGTCTCTGGC
581 CGCACACC-ACCCCGGCCCCCCCCGATCGTCAGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * * * *
16054194 GACGGTGTCTCGA-AGAAGAAAAATGCGGCACCAGCAAATGCCTGAGCCTAGCATGTGTTGCCGT
645 GATGGTGTCCCGACA-AAGAAAAATGCGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCGC
* * * *
16054258 AACCCTCGGTCCGGTCCGATCTTAGGCTGGGAATGAACTCCGAATGCTTAGACTGGGAATGAACT
709 AACCCTCGATCCTGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
** * * * *
16054323 CTGTATACCTAAGTCAACCCACAAAATGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
774 CCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * **
16054388 CGCAAGTCGGGGATTGGTCGGGTCCCTCTCTACG-TGCTACCAATCCTGCTACTG
839 CGCAAGCCGGGGATTGGTC-GGTCCCCCTCT-TGAT-CTGCCTATCCTGCTACCA
* * * ** *
16054442 CAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAC
1 CAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * *
16054507 ACAAGCTGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGTATCGA
66 ACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* *
16054572 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATGTTTCTGCCATTCCAATGCCATTTTTTTGGCT
131 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCT
* * *
16054637 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGACAACTCGTTTTT
196 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
16054702 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
261 TATTTTTCAAGATTTTCGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* *
16054767 TTGGACCCAAACCTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTA
326 TTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
* * *
16054832 AAAACTCGAAGTGTACAAGA-TTTGTGACCAATTGAAAAAAGTGTCCCCATTTCAGACACTTTAT
391 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAA
16054896 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
456 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* *
16054961 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGCACCCATCACACATCATGTGCGCAC
521 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* *
16055026 ACCACCCTCGGCCCCCCCCCCGATCGTC-GGAACCACAATGCCGCCGGTCAGGTTCTCCGGTGAT
586 ACCACCC-CGG--CCCCCCCCGATCGTCAGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT
* *
16055090 GGTGTCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACC
648 GGTGTCCCGACAAAGAAAAATGCGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* * * * *
16055155 CTCGATCCTGTCTGATCTTAGA-TCGGAAATGAACTTCGTATGCTTAGACTGGGGATGAACTCCG
713 CTCGATCCTGTCCGATCTTAGACT-GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCA
* * *
16055219 TATGCCTAAGTCAACCCACGAAACGAGTGTACGGGCGCTCAGCCGGCCAGAAGGGCGGGATGCGC
777 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * **
16055284 AAGCCGGGGCTCGACCAGGTCCCCCTCTTTGATCTGCCTATCCTGCTACCA
842 AAGCCGGGGATTGGTC-GGTCCCCCTC-TTGATCTGCCTATCCTGCTACCA
* * *
16055335 CAACCCTCAATCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCAACGAA
1 CAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * **
16055400 ACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGTGGGATTCTTAAGCCGTGGATCGA
66 ACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* *
16055465 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTCATGCCAATGCCA-TTTTTTGGCT
131 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCT
16055529 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
196 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* **
16055594 TATTTTTCAAGATTGTCGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
261 TATTTTTCAAGATTTTCGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * *
16055659 TTGGCCCC-AACCTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCG
326 TTGGCCCCAAACC-TGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT
*
16055723 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
390 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTA
16055788 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
455 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * *
16055853 TTGATGAGGGATAGGGGGCTAAAAAAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
520 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* *
16055918 CACC-CCCCGG-CCCCCCCGATCG-CAAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGG
585 CACCACCCCGGCCCCCCCCGATCGTCAGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGG
* * * *
16055980 TGTCTCAACGAAGAAAAATGCGGCACCAG-AACATGCCCGAGCCCAGCATGTGCTGCTGCAACCC
650 TGTCCCGACAAAGAAAAATGCGGCACCAGCAA-ATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* *
16056044 TTGTTCC-GATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCAT
714 TCGATCCTG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCAT
* * * * * ** *
16056108 ATGCCTAAGTCAATCCATGAAATGAGCGTGCAGGCACTCAGTTGGCCAGAGGGGCGAGATGCGCA
778 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
*
16056173 AGCCGGGGAATGGTCAGGTC
843 AGCCGGGGATTGGTC-GGTC
16056193 TCTCTCTATG
Statistics
Matches: 2365, Mismatches: 250, Indels: 66
0.88 0.09 0.02
Matches are distributed among these distances:
887 3 0.00
888 224 0.09
889 1 0.00
890 4 0.00
891 226 0.10
892 538 0.23
893 578 0.24
894 6 0.00
895 730 0.31
896 51 0.02
898 3 0.00
899 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (890 bp):
CAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
ACGAGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
TATTTTTCAAGATTTTCGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
TTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
ACCACCCCGGCCCCCCCCGATCGTCAGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGT
GTCCCGACAAAGAAAAATGCGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
GATCCTGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATG
CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
CGGGGATTGGTCGGTCCCCCTCTTGATCTGCCTATCCTGCTACCA
Found at i:16056088 original size:26 final size:26
Alignment explanation
Indices: 16056059--16056111 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16056049 CCGATCCGAT
*
16056059 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16056085 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16056111 C
1 C
16056112 CTAAGTCAAT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16056367 original size:26 final size:26
Alignment explanation
Indices: 16056338--16056391 Score: 108
Period size: 26 Copynumber: 2.1 Consensus size: 26
16056328 CTGATCCGAT
16056338 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16056364 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16056390 CT
1 CT
16056392 AAAGTCAACC
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.26, C:0.20, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16056447 original size:279 final size:279
Alignment explanation
Indices: 16055936--16056490 Score: 779
Period size: 279 Copynumber: 2.0 Consensus size: 279
16055926 GGCCCCCCCG
* * *
16055936 ATCGCAAGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCTCAACGAAGAAAAATGC
1 ATCGCAAGAACCCCAATGCCGTCGATCAGGTTCTCCGGCGATGGTGTCCCAACGAAGAAAAATAC
* * * * *
16056001 GGCACCAGAACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTTGTTCCGATCCGATCTTAGAC
66 GGCACCAGAACATACCAGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGAC
* * *
16056066 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAATCCATGAAAT
131 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAAC
** * * * *
16056131 GAGCGTGCAGGCACTCAGTTGGCCAGAGGGGCGAGATGCGCAAGCCGGGGAATGGTCAGGTCTCT
196 GAGCGTGCAGGCACTCAGCAGACCAGAGGGACGAGATGCGCAAGCCAGGGAATGGTCAGGTCCCT
*
16056196 CTCTATGTGCTACCGACCA
261 CTCTACGTGCTACCGACCA
* * * * *
16056215 ATCGCCAGAACCCCAATGCCGTCGATCAGGTTCTCTGGCGATGGTGTCCCGATGAAGAAAAATAT
1 ATCGCAAGAACCCCAATGCCGTCGATCAGGTTCTCCGGCGATGGTGTCCCAACGAAGAAAAATAC
* * * * *
16056280 GGCACCAGCATATATCAGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGATCCGATCTTAGAC
66 GGCACCAGAACATACCAGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGAC
*
16056345 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG-CTAAAGTCAACCCACGAAA
131 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCT-AAGTCAACCCACGAAA
* * * *
16056409 CGAGCGTGCGGGCGCTCAGCAGACCAGAGGGACGAGATGCGCAAGCCAGGGATTGGTCGGGTCCC
195 CGAGCGTGCAGGCACTCAGCAGACCAGAGGGACGAGATGCGCAAGCCAGGGAATGGTCAGGTCCC
* *
16056474 TCTTTGCGTGCTACCGA
260 TCTCTACGTGCTACCGA
16056491 TTCTACTGTT
Statistics
Matches: 240, Mismatches: 35, Indels: 2
0.87 0.13 0.01
Matches are distributed among these distances:
278 2 0.01
279 238 0.99
ACGTcount: A:0.25, C:0.27, G:0.28, T:0.20
Consensus pattern (279 bp):
ATCGCAAGAACCCCAATGCCGTCGATCAGGTTCTCCGGCGATGGTGTCCCAACGAAGAAAAATAC
GGCACCAGAACATACCAGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGAC
TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAAC
GAGCGTGCAGGCACTCAGCAGACCAGAGGGACGAGATGCGCAAGCCAGGGAATGGTCAGGTCCCT
CTCTACGTGCTACCGACCA
Found at i:16058150 original size:26 final size:26
Alignment explanation
Indices: 16058121--16058171 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16058111 CGATCCGATC
*
16058121 TTAGACTGGGAATGAACTCCGTATGT
1 TTAGACTAGGAATGAACTCCGTATGT
16058147 TTAGACTAGGAATGAACTCCGTATG
1 TTAGACTAGGAATGAACTCCGTATG
16058172 CCTAAGTCGA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.16, G:0.25, T:0.29
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCGTATGT
Found at i:16058398 original size:890 final size:887
Alignment explanation
Indices: 16056222--16066917 Score: 9931
Period size: 889 Copynumber: 12.2 Consensus size: 887
16056212 CCAATCGCCA
* * * ** *
16056222 GAACCCCAATGCCGTCGATCAGGTTCTCTGGCGATGGTGTCCCGATGAAGAAAAATATGGCACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * * * *
16056287 GCATAT-ATCAGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGATCCGATCTTAGACTGGGAA
66 GCACATGCTC-GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAA
16056351 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG-CTAAAGTCAACCCACGAAACGAGCG
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT-AAGTCAACCCACGAAACGAGCG
* * * * * * *
16056415 TGCGGGCGCTCAGCAGACCAGAGGGACGAGATGCGCAAGCCAGGGATTGGTCGGGTCCCTCTTTG
194 TGCGGGCGCTCAGCCGGCCAGAGGG-CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* ** * * * ** * * *
16056480 CGTGCTACCGATTCTACTGTTGTAACCCTCGGTCTGATCTGATCTTAGATTGGGAATAAACTCTG
258 CGTGCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCG
* * * * * * *
16056545 TATGCCTAAGACAACCGATGAATCAAGCGGTCGGGCGGGTGGGCACTACGCCGGCCAGAGAGACG
323 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCG
* * * *
16056610 GGATGCGTAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTTGGTACATCTTCATATTT-TGGCC
388 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCC
* * *
16056674 ATGCAAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATTTGAAGTT
452 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
* *
16056739 TCATGGCAAGACAACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
517 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
*
16056804 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGCTG
582 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
*
16056869 GCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAC
647 GCATGCACAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
16056934 TATCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTA
711 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
*
16056999 AA-GGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
776 AAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
** * *
16057063 CCCATCGCACATCATGTGCATACACCCCC-CGATCCTCCCCCATCGTCG
841 CCCATCGCACATCATGTGCGCACACCCCCTCG-GCC-CCCCGATCGTCG
* * * * * * * *
16057111 GAACCCCAATACCGTCGGTTAGGTTATCCAACAATGGTGTCCCGACAAAGAAAAATACGGTACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
16057176 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAA-CCTCCGGTCCGGTCCGATCTTAGACTGGGAA
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCT-CGGTCCGGTCCGATCTTAGACTGGGAA
* * *
16057240 TGAAACTCCGTCTGCTTAGACTGGG-ATGAACTCGCGTATCCCTAAGTCAAGCCACGAAACGAGC
130 TG-AACTCCGTATGCTTAGACTGGGAATGAACTC-CGTATGCCTAAGTCAACCCACGAAACGAGC
* * **
16057304 GTGCGGGCGCTCAGCCAGCCGAGAGGGCGGAATTGCGCAAGCCGGGGATCGGTCGGGTCCCTTTC
193 GTGCGGGCGCTCAGCCGGCC-AGAGGGCGGGA-TGCGCAAGCCGGGGATCGGTCGGGTCCCCCTC
* * * * * * *** * *
16057369 TGTGTGCTGCCGATCCTGCTACTGCAACCCTCAGTCCGGTCTGGTCTTACACTGGGAATGAATTC
256 TGCGTGCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTC
* * * *
16057434 CGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCAGGCGGGCACTACGCCGGCCAAAGAAG
321 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGG
* *
16057499 CGGGATGCGCAAGCGGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACGTCTTCATATTTCTGC
386 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * * *
16057564 CACGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTCATGTGAAGT
451 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
* * * * * * *
16057629 TTCATAGCAAGATGACTCGTTTTCTAATTTTCATGA-TTTTCAAACTTTTTACAGTTTGAAATTT
516 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTT
* ** *
16057693 TTTTAAATTTTTTCAGAAGGAGTTTTGGATCCAAACTTGGTAGACGTGATCGTTGTATTTTTGTT
581 TTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* *
16057758 GGCATGCACAAAACAATTCAGCTAAAAATTTGAAGTGTACAAGATTTTTGTGACCATTTGAAAAA
646 GGCATGCACAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGA-TTTTGTGACCATTTGAAAAA
* * *
16057823 AGTGTCCCCATTTTAGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTT
709 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
16057888 TAAAGGGGTGTGAGTTC-CTGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCA
774 TAAAGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
16057952 GCACCCATCGCACATCATGTGCGCACACCCACCTCGGCCCCTCCGATCGTCG
838 GCACCCATCGCACATCATGTGCGCACACCC-CCTCGGCCCC-CCGATCGTCG
* * * *
16058004 GAACCCCAATGCCGCCGGTTAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGACACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * *
16058069 GCACATGCTCGAGCCCAGCATGCGCTGCCGCAACCCTCGTTCCGATCCGATCTTAGACTGGGAAT
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
* * * * *
16058134 GAACTCCGTATGTTTAGACTAGGAATGAACTCCGTATGCCTAAGTCGACCCATGAAATGAGCGTG
131 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* *
16058199 CAGGCGCTCAGCCGGCCAGAGGGCGGGATGTGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGT
196 CGGGCGCTCAGCCGGCCAGAGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGT
* **
16058264 GCTATCGATCCTACTGCCGTAACCCTCAGTTTGGTCCAATCTTAGACTGGGAATGAACTCCGTAT
261 GCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTAT
* * * * * * * *
16058329 GCCTAAGCCAACCGATGAAATGAGCAGGCCGACAGGCGGGCACTATGTCGGCCAGAGAGGCGGGA
326 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGA
*
16058394 TGCGCAAGCCGTTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
391 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
* *
16058459 CAATGCCATTTTTTTGGCTTGTAAATTCATACAATGTTCCCTTAAGCCTTCATGTGAAGTTTCAT
456 CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * * *
16058524 GGCAGGACGAGTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAA
521 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAA
* ** * *
16058589 AATTTTTGCAGAAGGAGTTTTGGCCCCAAAGATGGTAGACATGATCCTTGTATTTTTTTTGGCAT
586 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
16058654 GCACAAAAACATTCAGCTCAAAACTCGAACTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTC
651 GCACAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * *
16058719 GCCATTTCTGACACTTTAATGGCTATTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTT-AAGT
715 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAG-
* * *
16058783 GGGTGTGAGTTCTTGAGGTTTGATGAAGGATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCC
779 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* *
16058848 ATCGCACATCATGTGCGCATACCCCC-CGGTCCCCCC-ATCGCCG
844 ATCGCACATCATGTGCGCACACCCCCTCGG-CCCCCCGATCGTCG
* * * * *
16058891 GAACCCCAATACCGTCGATCAGGTTCTCCGACGATGGTGTCTCGGTGAAGAAAAATACGGAACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * *
16058956 GCACATGC-CAGAGCCCAGCA-GTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGATTGAGAA
66 GCACATGCTC-GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAA
* *
16059019 TGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGT
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * *
16059084 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATACGTAAGCCGGGGATTGGTCGGGTCCCTCTCTGT
195 GCGGGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGC
* * ** * *** * *** ** * * *
16059149 GTGCTATTTTTCTATTTTTCATGATTTTTGAA-ACTTTTTAAGGTTCGAGATTTTTTTAAATTTT
259 GTGCTA----CCGATCCTAC-TG--CCGT-AACCCTCAGTCCGG-TCCA-A---TCTTAGA----
* ** * * *** * * ** ******* **
16059213 TTTAGAA-GAA-T---TTTGGCC----CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
307 CTGGGAATGAACTCCGTAT-GCCTAAGCCAACCGACG-AAAC--GA-GCGGGCGGGCGGGCGGGC
** * * ** ** * ** * * * ** **
16059269 A-T--GCAC--AAAAAAATTC-GG-TG-AAAAACTCGAAG-T-GTACAAGAT--TTTGTGACCAT
367 ACTACGC-CGGCCAGAGAGGCGGGATGCGCAAGC-CGTGGATCG-ATAGGGTGGTAGGTG--GGT
** * * * ** * * ** * * ** * * * *
16059322 TT-GAAAAAAGTGTCCCCATTTCAGACACT-TTAATGGC-TACTGGCAGCAAACCTGTAAAATC-
427 TTAG-GCACA-TCTTCATATTTCTGCCA-TGCCAATGCCAT-TTTTCTG---GCTTGTAAATTCA
* * ** * * * * * * * **
16059383 T-CAAATGCT-CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGTGATA-AGGGGCTAATAAA
485 TAC-AATGGTCCCTTAA--GCCT-TCA--TGT-GAAGTTTCATG-G-CA-AGA-CGACTCGT---
*** * ** ** *** * ** **** ** ******** **
16059445 AGGGCCAAGTACCA-GCACCCATTGCACATCATGTGCGTACACCCCCCGA-CCCCCCCGA--TCG
536 -TTTCTATTTTTCATG-A-TTTTTG-A-AAC-T-T-TTTACGGTTCGAGATTTTTTAAAATTTTT
* *** ** * ** * ** * *
16059506 TCGGAA-CCCTGAT-GCCGC---C--GGTCAG--GTTCTCC-GGTGA-TGGTGTCTCGACGAAG-
593 TCAGAAGGAGTTTTGGCCCCAAACTTGGT-AGACGTGATCCTTGT-ATTTTTGT-T-GGC-ATGC
* ** * ** * *** * *** * * * *****
16059559 AAAAATACAACACCAGC-ACATGCCCG-AGCCCAGC-ACATGCCCGAGCCCAGCCTGTG-CTGCC
653 ACAAA-A-AA-TTCAGCTAAAAACTCGAAGTGTA-CAAGAT-TTTGTGACCA---TTTGAAAAAA
** * * * * * * ** ** * * **
16059620 GTAG-CCCTCGGTCCGGTC-CGATCTTAGATTGG-GAATGAACTCCGTA--TGCTTAGA-CTGGG
710 GT-GTCCC-CATTTCAGACAC--T-TTA-A-TGGCTACTG-GCAGCAAACCTG-TAAAATCT-CA
** * ***** * * * * ** * * * *
16059679 AATGAACTCCATATACCTAAGTCA--AC-CCACG--AAATGAGCG-T-GTGGG-C-A-CTCAGCC
765 AATG--CTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG--
*** *** ** ** *
16059734 GGCC-AG-AGGGGC-GGGATGCGCA-AGTCGGGGAATG-GTCAGGTCCCTCTCTGTGTGCTACCG
826 GGCCAAGTACCAGCACCCAT-CGCACA-TC-ATG--TGCG-CA-CACCC-C-CT-CG-GC--CC-
* * * *
16059794 ACCAATCGCCA
877 CCCGATCGTCG
* * * * *
16059805 GAACCCCAATGCCATCGATCAGGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATGCGGCACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * *
16059870 GCACATGCTCGAGCCCAACATGTGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGACTGGGAAT
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
* *
16059935 GAACTCCATATGCTTAGACTGGGAATGAACTCCTTATGCCTAAGTCAACCCACGAAACGAGCGTG
131 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
16060000 CTGGCGTTCAGTCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGATCCCCCTCTGCG
196 CGGGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCG
* * *
16060065 TGCTACCGATCCTGCTGCGGTAACCCTCAGTTCGGT-CAGATCTTAGACTGGGAATGAACTCCGT
260 TGCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCA-ATCTTAGACTGGGAATGAACTCCGT
** * *
16060129 ATGCCTAAGGAAATCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGG
324 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGG
* *
16060194 GATGCACAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAT
389 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAT
* * *
16060259 GCCAATGCCATTTTTCTAGTTTGTAAATCCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
454 GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * *
16060324 ATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACTGTTCGAGATTTTTT
519 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT
** *
16060389 AAAATTTTTTCAGAAGGAGTTTTCCCCCCAAACTTGGTAGACGTGATCCTTCTATTTTTGTTGGC
584 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* *
16060454 ATGCATAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGAGACCATTTGAAAAAAGTG
649 ATGCACAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * *
16060519 TCCCTATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAA
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAA
* *
16060584 -GGGTGTGAATTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCCGCACC
778 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* *
16060648 CATCGCACATCATGTGCGCACACCCCCCCGGTCCTCCCCTATCGTCG
843 CATCGCACATCATGTGCGCACACCCCCTCGG-CC-CCCCGATCGTCG
* * * * *
16060695 GAACCCCAATACCGTCGGTCAGGTTATCCGACGATGGTGTCTCGGCAAAGAAAAATACGGCATCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * *
16060760 GCACATGCTTGAGCCCAGAATGTGCTGTCGCAACCC-CGGTCCGGTCCGATCTTAGACTGGGAAT
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
16060824 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
131 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * *
16060889 CGGGCGCTCAGTCGGCCAGAGGG-GTGAGATTCGCAAGACGGGGATCGGTCGGGTCCCCCTCTGC
196 CGGGCGCTCAGCCGGCCAGAGGGCG-G-GATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGC
* * ** ** *
16060953 GTGCTGCCGATCCTGCTGCCACAACCCTC-GTTCCGGTCCGGTCTTAGACTAGGAATGAACTCCG
259 GTGCTACCGATCCTACTGCCGTAACCCTCAG-TCCGGTCCAATCTTAGACTGGGAATGAACTCCG
* *
16061017 TATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGGCG
323 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCG
* * * * *
16061082 GGATGCGCAAGCGGTGGATCGATAGGGTGGTACGTGGGCTTAGGCACATCTTCATATTTTTGCCG
388 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* * *
16061147 TGCCAATACCATTTTTCTGGCTTGTAAATTCATACAGTGGTCCCTTAATCCTTCATGTGAAGTTT
453 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* ** *
16061212 CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCG-GAATTTT
518 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAG-ATTTT
* ** *
16061276 TTTAAATTTTTTCAGAAGGAGTTTTGGATCCAAACTTGGTAGACGTGATCCTTGTATATTTGTTG
582 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
16061341 GCATGCACAAAATAATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAATAG
647 GCATGCACAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
16061406 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
711 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * *
16061471 AGGGGGTGTG-GTTCTTGAGGTTTGATGAGGGATAGGGGGCTAATAT-AGGG-CAAGTACCAGCA
776 AAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
*
16061533 --CATCGCACAATCAATGTGGCGCACACCCACTC-GCCGCCCCGATTCG-CTG
841 CCCATCGCAC-ATC-ATGT-GCGCACACCCCCTCGGCC-CCCCGA-TCGTC-G
** * * * * *
16061582 G-ACCCC-ATGCCAACAGTTAGTCTTCTCCGA-GATGGTGTCCCCGACG-AGAAATAAT--GCCT
1 GAACCCCAATGCCGTCGGTCAG-GTTCTCCGACGATGGTGT-CCCGGCGAAGAAA-AATACGGC-
* * *
16061641 GCCAGCAC-TGCTCG-G-CCAGCATGGTGCTGCCAAG-AA-CCTCGTTCTGGTCCGATCTTAGAC
62 ACCAGCACATGCTCGAGCCCAGCAT-GTGCTGCC--GCAACCCTCGGTCCGGTCCGATCTTAGAC
* * *
16061701 TGGGAATGAACGCCGTATGCTTAGACTAGGAATGAACTCCGTATG-CTAAGTCAACCCACG-AAT
124 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * * *
16061764 GAGTGGTGCGGGCCGCTCCAACCGG-CAGAGGGGCGGAATACGTAAGTC-GGGATGGGTCGGGTC
189 GAG-CGTGCGGG-CGCT-CAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC
* * * ** *
16061827 GCCGCCTACTGCATGTTCGT-TCGATCCT-CATGTCG-AA-CCTTGGTCTGGTCCAATC-TAG-C
250 -CC-CCT-CTGC--GTGC-TACCGATCCTAC-TGCCGTAACCCTCAGTCCGGTCCAATCTTAGAC
* * * * * *
16061886 TGGTAATGAACTCCGTATACCTAAGCCAACTGGCGAATCGAGCGGGCGAGCGGGCGGGCACTACG
308 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * *
16061951 TCGGCCAGAGAGGCGGGATGCGGAAGTCGTGGATCGATAGGGT-GTAGGTGGGTTTAGGCACATC
373 CCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
*
16062015 TTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
438 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
16062080 CTTCATGTGAAGTTTCATGGCAAGACGAGTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTA
503 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA
* * * * * *
16062145 CGATTTGGGATTTTTTTTAAATTTTTTCAGAGGGAG-TTTGGCCCCAAACATGGTAGACGTGATC
568 CGGTTCGAGA-TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * *
16062209 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGCGTACAAGATGTTGTG
632 CTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* * *
16062274 ACCATTTGAAAAAAATGTCCCCATTTCAAACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAAT
696 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * * *
16062339 CTAAAATGCTCTTTAAGGGGGTGCT-AGTTCTCAAGGTTTGATGAGGGGTAGGGGGCCAATATAA
761 CTCAAATGCTCTTTAAAGGGGTG-TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * * * *
16062403 GGGCCAAGTACCAACACCCATCGCACATCATGTGCGCACACCCCCCACGG-CCCCCTATCCTTG
825 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTCGGCCCCCCGATCGTCG
* * *
16062466 GAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTTTCCCGACGAAGAAAAATGA-GGCACC
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAAT-ACGGCACC
* * * * **
16062530 AGCACATGCCCGAGCCCAGCATGTGCTGTCGAAACCCTCGGTCTGGTCCGATCTTAGACTAAGAA
65 AGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAA
* * * * *
16062595 TTAACTCTGTATGCTTAGACTGGGAGTGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGT
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * *
16062660 GCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCCGC
195 GCGGGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGC
* ** * * ** * * ** * **
16062725 ATGCTGTCGATCTTGCTGCCACAACCCTCAATGCGGTCTGATCTTAGATTGGGAATGAACTCTAT
259 GTGCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGT
* **
16062790 ATGCCTAAGCCAACTGACGAAACGAGCGGGCGGATGGGCGGGCACTACGCCGGCCAGAGAGGCGG
324 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGG
* * * * *
16062855 GATGCGTAAGCCGTGGATCGTTGGGGTGGTAGGTGTGTTTAGGCACATCTTCAAATTTCTGCCAT
389 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAT
* * *
16062920 GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCTTTAAGACTTCGTGTGAAGTTTC
454 GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * * * *
16062985 ATGGCAAGACGACCCGTTTTCTATTTTTTACGATTTTTGAAACTTTTTAGGGTTCGGGATTTTTT
519 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT
* * * *
16063050 AAAATTTTTTCAGAAGGAGTTTTGGCCGCAAACCTGGTAGACGTGATCCCTGTATTTTTTTTGGC
584 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
*
16063115 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAAATTTTGTGACCATTTGAAAAAAGTG
649 ATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* *
16063180 TACCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTT-AA
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAA
16063244 GGTGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
778 GG-GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
*
16063309 CCATCGCACATAATGTGCGCACACCCCCT-GGCCCCCCGATCGTCG
842 CCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCGATCGTCG
* * * * *
16063354 AAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAG--AAA-A--GTA-C-
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * *
16063412 G---A---TC--G--CA--A----C--CCG------T-GGTCCAGTCCAATCTTAGACTAGGAAT
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
* * * * * **** ** * * ***
16063452 CAATTCCATATCCCTAAGTCAACCCACAA--AACGAGCGTGAAGGGCGCTCAG-CCGGCCA-G--
131 GAACTCCGTAT-GCTTAG---ACTGGGAATGAAC-TCCGT--A-TGC-CTAAGTCAACCCACGAA
* * * ** * * * * * *
16063511 A-G-GGGTG-GGATGCGC-AAGCCGAG-GATCGGTCGGG-TCCCCCA-CTACGTGCTG-TCGATC
187 ACGAGCGTGCGG--GCGCTCAGCCG-GCCAGAGGGCGGGATGCGCAAGC--CG-G-GGATCGGTC
* * * * * * * * *
16063568 TTGCTGTCGCAACCCTC-G-ATCCGATCCGATCTTAGACTG--GGAA---TGAACTCCGTATGCC
245 --G-GGTC-C--CCCTCTGCGTGCTA-CCGATCCT--ACTGCCGTAACCCT-CAGTCCG-GT-CC
* * * * * ** *** * * ** * * * * ** *
16063626 TAAGC-CA-AC--CG-ACGAA--ACG-A-G-C-GGGCGGGCGGGCGGGCACTATACCGACTAGAG
298 -AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-GAAACGA-GCGGGCGGGCG
16063680 AGGCGGG----A--------------------TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
360 -GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
16063721 GGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
424 GGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
* *
16063786 ATGGTCCCTTAAGCCTTCGTGTGAAGTTTCATGGCAAGAAGACTCGTTTTCTATTTTTCATGATT
489 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATT
* * * * *
16063851 TTTGACACTTTTTACGGTTTGGGATTTTTTAAAA-TTTTTCAGAAGTAGTTTTGGCACCAAACTT
554 TTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTT
* * *
16063915 GGTAGACATGATCCTTGTATTTTTGCTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGT
619 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGT
* * *
16063980 ACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTTAGACACTTTAATGGCTACTGGTAGC
683 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
16064045 AAACCTGTAAAATCTCAAATGCTCTTGAAAGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
748 AAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * * *
16064110 AGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATCATGTGCACACACCCCCCTCGACCC
813 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTCGGCCC
16064175 TCCCGATCGTCG
877 -CCCGATCGTCG
* * * * **
16064187 GAACCCCAATGCCGCCAGTCAGGTTCTCTGGCGATGGTGTCCCGGCGAAGAAAAATGTGGCACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * * *
16064252 GCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCTGTCCGGTCTGATCTTAGACTGGGAAT
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
* *
16064317 GAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAG--------C----CGA-----
131 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* *
16064365 ------C-CA----G--AG-GGGCGGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGGGT
196 CGGGCGCTCAGCCGGCCAGAGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGT
* * * * * * * *
16064416 GTTGCTGATCCTGCTACCGTAACCCTCA-TCCGATCCAATTATTAGACTGGGAATGAACTCCATA
261 GCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAA-TCTTAGACTGGGAATGAACTCCGTA
* * *
16064480 TGCGTAAGCCAACCGACGAAACGA----GCGGGCGGGCGGGCACTACGTCGGCCAGAAAGGCGGG
325 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
* * * *
16064541 ATGCGCAAGCCGTGTATCAATAGGGTGGTAGGTGGGTTTAGGCAAATCTTCATATTTCTGCCGTG
390 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
* * *
16064606 CCAATGCAATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAATTTCA
455 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* *
16064671 TGGCAAGACGACCCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACAGTTCGAGATTTTTTA
520 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTA
* * * * *
16064736 AAATTTTTTCAGAAGGATTTTTGGTCCCAAACTTGGTAAACGTGATCCTTCTATTTTTGTTGCCA
585 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
16064801 TGCACAAAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
650 TGCACAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * * *
16064866 CCCCGTTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGG
714 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAG
* * * * **
16064931 GGGAGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAT-AGCTGCCAAGTA-CTGCGGC
779 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG-GGCCAAGTACCAGCACC
* * *
16064994 CATCG--CATCATGTGAGC-C-CCCCC-CAGCCTCCCGATCG--G
843 CATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCGATCGTCG
* * * * * * * * *
16065032 AAACCCTAATGTCG-CAGTCAAGTTCT-CG--GATGGTGTCTC-GTG-AG--AAGT--TG-ACGC
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCAC-C
* ** * * *
16065086 AGCACATGCT-GAGCCGAGCATGTGCTATCGC-AGCCTC-GTTCGGTCCGA-CTTAGTCTGGGAA
65 AGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAA
16065147 TGAACTCCGTATGCTT-GACTGGG-ATG-ACTCCGTATGCC-AAGTC-ACCCACGAAAACCGA-C
130 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG-AAA-CGAGC
* * * * * * * **
16065206 GTGC-AGTGCTCTGCCGGCTAGAAGGC--AATGCGCAAGCCGGGGATCGGTCAGG--CGTCTCTG
193 GTGCGGGCGCTCAGCCGGCCAGAGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG
* * * * *
16065266 CATG-T-CCGAT-CTACTACCG-AACCTTCA-T--TG-ACAATCTTAGACTGGGAATGAACTCCG
258 CGTGCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCG
* * * * * *
16065323 TATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGAGGGCATTACGTCGGCCAAAGAGGTG
323 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCG
**
16065388 GGATGCGCAAGCCACGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTCATGCC
388 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-TGCC
16065452 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
452 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
* * **
16065517 TCATGCCAAGACGACTCGTTTTCTATTTTTTATGATTTTCAAAACTTTTTACGGTTCGAGATTTT
517 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
* * * * *
16065582 TTTAAATTTTTTCAGAAGGAGTTTTGGGCCCAAACTTGGTAGACATGATCCTTTTATTTTTTTTG
582 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
16065647 GCATGCACAAAAAATTTCAGCTCAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAG
647 GCATGCACAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
16065712 TGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTT-
711 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
*
16065776 AAGGGGTTATGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
776 AAGGGG-TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* *
16065841 ACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCGATCGTCG
840 ACCCATCGCACATCATGTGCGCACACCCCCTCG-GCCCCCCGATCGTCG
* * * * *
16065890 GAACCCTAATGCCGTCGGTGAGGTTATCCGACGATGGTG-CCTGGCGAAGAAAAATATGGCACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * * *
16065954 ACACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAAT
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
*
16066019 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTG
131 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * *
16066084 CGGGTGCTCAACCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACG
196 CGGGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCG
* * * * * * *
16066149 GGCTGCCGATCCTACAGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCC-TA
260 TGCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTA
*
16066213 TGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGCGGGCACTACGTCGGGCC-GAGAGGCGG
325 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG-CCGGCCAGAGAGGCGG
* * **
16066273 GATGCACAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTGCTGT
389 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAT
* * *
16066338 GCCAATGCCATTTTTCTGGCTTTTAAATTCATACAATGGTCCCTTAAGTCTTCATGTGAAGTTTA
454 GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * * ** *
16066403 ATGGCAAGACGACTTGTTTTCTATTTTTTACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTT
519 ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT
* * * * *
16066468 AAAAATTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCCTATTTTTTTGTTGGC
584 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
*
16066533 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTG
649 ATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * *
16066598 TCCCCATTTCAGTCACTTTAATGGCTACTGGCAGCAAACCAGTAAAATCTCAAATGCTCATT-AA
713 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAA
*
16066662 GGCGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAATGGCCAAGTACCAGCAC
778 GG-GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* *
16066727 CCATCGCACATCATGTGCACACA-CCCCTCCGGCCCCCCTCGATCCTCG
842 CCATCGCACATCATGTGCGCACACCCCCT-CGG-CCCCC-CGATCGTCG
* * ** * * *
16066775 GAACACCAATGTCACCGGTCAGGTTCTCCGACGATGGTGTCCTGACGAAGAAAAATGCGGCACCA
1 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
* * * * *
16066840 GCACATGCCCAAGCCCAGCATGTGTTGCCGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAAT
66 GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
16066905 GAACTCCGTATGC
131 GAACTCCGTATGC
16066918 CTAAGCCAAC
Statistics
Matches: 7965, Mismatches: 1360, Indels: 967
0.77 0.13 0.09
Matches are distributed among these distances:
825 4 0.00
826 7 0.00
827 16 0.00
828 19 0.00
829 7 0.00
830 268 0.03
831 226 0.03
832 19 0.00
833 69 0.01
834 27 0.00
835 16 0.00
836 4 0.00
837 8 0.00
838 2 0.00
839 3 0.00
840 8 0.00
841 10 0.00
843 2 0.00
844 11 0.00
845 57 0.01
846 4 0.00
847 8 0.00
848 12 0.00
849 443 0.06
850 22 0.00
851 7 0.00
852 28 0.00
853 14 0.00
854 210 0.03
855 249 0.03
856 52 0.01
857 24 0.00
858 33 0.00
859 16 0.00
860 13 0.00
861 13 0.00
862 29 0.00
863 18 0.00
864 8 0.00
865 33 0.00
867 10 0.00
868 19 0.00
869 6 0.00
870 9 0.00
871 30 0.00
872 7 0.00
873 4 0.00
874 15 0.00
875 13 0.00
876 20 0.00
877 3 0.00
878 1 0.00
879 24 0.00
881 8 0.00
882 13 0.00
883 367 0.05
884 735 0.09
885 154 0.02
886 325 0.04
887 178 0.02
888 347 0.04
889 1224 0.15
890 762 0.10
891 515 0.06
892 188 0.02
893 169 0.02
894 34 0.00
895 38 0.00
896 30 0.00
897 15 0.00
898 27 0.00
899 53 0.01
900 24 0.00
901 17 0.00
902 32 0.00
903 42 0.01
904 26 0.00
905 16 0.00
906 27 0.00
907 38 0.00
908 24 0.00
909 35 0.00
910 39 0.00
911 14 0.00
912 15 0.00
913 8 0.00
914 82 0.01
915 164 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (887 bp):
GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGGCACCA
GCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
CGGGCGCTCAGCCGGCCAGAGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGT
GCTACCGATCCTACTGCCGTAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGA
TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAA
AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
GCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGG
GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCTCGGCCCCCCGATCGTCG
Found at i:16059045 original size:26 final size:26
Alignment explanation
Indices: 16059006--16059058 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16058996 CCGGTCCGAT
*
16059006 CTTAGATTGAGAATGAACTCCATATG
1 CTTAGACTGAGAATGAACTCCATATG
* *
16059032 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCATATG
16059058 C
1 C
16059059 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCATATG
Found at i:16059593 original size:17 final size:17
Alignment explanation
Indices: 16059571--16059609 Score: 78
Period size: 17 Copynumber: 2.3 Consensus size: 17
16059561 AAATACAACA
16059571 CCAGCACATGCCCGAGC
1 CCAGCACATGCCCGAGC
16059588 CCAGCACATGCCCGAGC
1 CCAGCACATGCCCGAGC
16059605 CCAGC
1 CCAGC
16059610 CTGTGCTGCC
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 22 1.00
ACGTcount: A:0.23, C:0.49, G:0.23, T:0.05
Consensus pattern (17 bp):
CCAGCACATGCCCGAGC
Found at i:16059957 original size:26 final size:26
Alignment explanation
Indices: 16059921--16059973 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16059911 CCGATCCGAT
16059921 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16059947 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCATATG
16059973 C
1 C
16059974 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16060839 original size:26 final size:26
Alignment explanation
Indices: 16060810--16060862 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16060800 CCGGTCCGAT
16060810 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16060836 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16060862 C
1 C
16060863 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16061732 original size:26 final size:26
Alignment explanation
Indices: 16061694--16061747 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
16061684 CTGGTCCGAT
*
16061694 CTTAGACTGGGAATGAACGCCGTATG
1 CTTAGACTAGGAATGAACGCCGTATG
*
16061720 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACGCCGTATG
16061746 CT
1 CT
16061748 AAGTCAACCC
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACGCCGTATG
Found at i:16064332 original size:26 final size:26
Alignment explanation
Indices: 16064303--16064355 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16064293 CCGGTCTGAT
16064303 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16064329 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16064355 C
1 C
16064356 CTAAGCCGAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16066034 original size:26 final size:26
Alignment explanation
Indices: 16066005--16066057 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16065995 CCGGTCTGAT
16066005 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16066031 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16066057 C
1 C
16066058 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16067632 original size:26 final size:26
Alignment explanation
Indices: 16067596--16067648 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16067586 CTGGTCTGAT
16067596 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16067622 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16067648 C
1 C
16067649 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16068514 original size:26 final size:26
Alignment explanation
Indices: 16068485--16068537 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16068475 CCGCTTCGAT
* * *
16068485 CTTAGGCTGGGAATGAATTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16068511 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16068537 C
1 C
16068538 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16070264 original size:26 final size:26
Alignment explanation
Indices: 16070235--16070284 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
16070225 ATTCGATCTA
* *
16070235 AGACTGGGAATGAATTCCGTATGCTT
1 AGACTAGGAATGAACTCCGTATGCTT
16070261 AGACTAGGAATGAACTCCGTATGC
1 AGACTAGGAATGAACTCCGTATGC
16070285 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.18, G:0.26, T:0.26
Consensus pattern (26 bp):
AGACTAGGAATGAACTCCGTATGCTT
Found at i:16074653 original size:26 final size:26
Alignment explanation
Indices: 16074617--16074669 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16074607 CCGATCTGAT
* *
16074617 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
16074643 CTTATACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16074669 C
1 C
16074670 CTCAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:16075545 original size:26 final size:26
Alignment explanation
Indices: 16075495--16075547 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16075485 CCGATCCGAT
*
16075495 CTTAGACTGGGAATGAACTATGTATG
1 CTTAGACTGGGAATGAACTACGTATG
* *
16075521 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTACGTATG
16075547 C
1 C
16075548 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:16076483 original size:159 final size:158
Alignment explanation
Indices: 16076191--16076596 Score: 481
Period size: 159 Copynumber: 2.6 Consensus size: 158
16076181 GCCCAGCATG
* * *
16076191 TGCTGCTGCAAACCTCAGTCCGGTCCGATCTTAGAATGGGAATGAACTTCGTATGCCTAAGTCAA
1 TGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACT-GGAATGAACTTCGTATGCCTAAGTCAA
* * * * * * * *
16076256 CCCACGAAATGTGCGTGCGGGCACTCAGTCGGCCAAAGGGGCAGGATGTGCAAGCTGGGGATCGG
65 CCCACAAAATGTGCGTGCGGGCGCTCAGCCGACCAAAGGGGCAGGATGCGCAAGCCGGCGATCCG
16076321 TCAGGTCTCCC-TCAGCGTGCTGGCGATCC
130 TCAGGTC-CCCTTCAGCGTGCTGGCGATCC
* *
16076350 TGCTGCCGCAACCCTCACTCCGGTCCGGTCTTAGACTGGAAATGAACTTCGTATGCCTAAGTCAA
1 TGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGG-AATGAACTTCGTATGCCTAAGTCAA
* * *
16076415 CCCACAAAACGTGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGCGATCCG
65 CCCACAAAATGTGCGTGCGGGCGCTCAGCCGACCAAAGGGGCAGGATGCGCAAGCCGGCGATCCG
* * *
16076480 TCAGGTCCCCTTCTGTGTTCTGGCGATCC
130 TCAGGTCCCCTTCAGCGTGCTGGCGATCC
* * * * ** * * * *
16076509 TACTGTCGTAACCGTTGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCAA
1 TGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACT-GGAATGAACTTCGTATGCCTAAGTCAA
* * *
16076574 CCGACAAAATGAGCGGGCGGGCG
65 CCCACAAAATGTGCGTGCGGGCG
16076597 GGCAAGCACT
Statistics
Matches: 209, Mismatches: 35, Indels: 6
0.84 0.14 0.02
Matches are distributed among these distances:
158 5 0.02
159 202 0.97
160 2 0.01
ACGTcount: A:0.21, C:0.29, G:0.30, T:0.20
Consensus pattern (158 bp):
TGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGAATGAACTTCGTATGCCTAAGTCAAC
CCACAAAATGTGCGTGCGGGCGCTCAGCCGACCAAAGGGGCAGGATGCGCAAGCCGGCGATCCGT
CAGGTCCCCTTCAGCGTGCTGGCGATCC
Found at i:16079433 original size:892 final size:888
Alignment explanation
Indices: 16076379--16090517 Score: 17184
Period size: 889 Copynumber: 16.0 Consensus size: 888
16076369 CCGGTCCGGT
* * * *
16076379 CTTAGACTGGAAATGAACTTCGTATGCCTAAGTCAACCCACAAAACGTGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16076444 CGACCAGAGGGGCGGGATGCGCAAGCCGGCGATCCG-TCAGGTCCCCTTCTGTGTTCTGGCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT-CGATCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * * * *
16076508 CTACTGTCGTAACCGTTGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * ** * *
16076573 ACCGACAAAATGAGCGGGCGGGCGGGCAAGCACTACGCCTGCCAGAGAGGCAGGATGCGCAAGCC
194 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
16076638 GTGGATCGAAAAGGTGGTAGGTGGGTTTAGGCACATGTTCATATTTCTGCCATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * ** *
16076703 TTTCTAGCTTGTAAATTCATACAACGGTCTATTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
324 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
** * * *
16076768 CTCGTTTTCTATTTTTCACAATTTTCAAAACATTTTACGGTT-TAGGATTTTTTAAAATTTTTTC
389 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTC
* * **
16076832 AGAAGGAGTTTTGGCCCCAAACATGTTAGACGTGATCCTTGTATTTTTGTTGGCATGCGTAAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
16076897 AATTTAGCTAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
16076962 GACACTTTAATGGCTACTGGCAGCAAAACTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
16077027 TCTC-ATGGTTTGATGAGGGATAAGGGGCCAATAT-AGGCGCCAAGTACCAGCTA-CC-TCGCAC
648 TCTCGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGG-GCCAAGTACCAGC-ACCCATCGCAC
* * *
16077088 ATCAATGTGC-TACAACCTCCCGCCGG--CCCCCGATGCGTCGGAAACCCCAGTGCCATC-GTCA
710 ATC-ATGTGCGCAC-ACC-CCC-CCGGCCCCCCCGAT-CGTCGG-AACCCCAATGCCGTCGGTCA
* * * *
16077149 GGTTCTCCGGCGATGGTGTCCAGCAGAAGCAAAATGCGGCACCAGCAAATTGCCCGAG-CCAGCA
769 GGTTCTCCGGCGATGGTGTCCCGC-GAAGAAAAATACGGCACCAGCACA-TGCCCGAGCCCAGCA
* *
16077213 TGTGCTACCGCAA----C---CC--T-C-A--TT---C---G--T----T-TG-AT-
832 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16077242 CTTAGACTAGGAATGAACT-CGTATGCC-AAGTCCAACCCACGAAATGAGCGTGCGGGCGCTCCA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGT-CAACCCACGAAACGAGCGTGCGGGCGCT-CA
* * * **
16077305 GCCGGCCAG-GGGGCGGGATGCGCAAGGCGGGGATCGATCGGGTCCCCCACTGCGTGTTATCGAT
64 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
** * * * *
16077369 CCTGCTGTGGCAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCGGTAGGCCTAAGCC
129 CCTGCTGCCGCAACCCTCGGT-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
16077434 AACCGATGAAACTAGCAGGCGGCCGGGAGGGCACTACGCCGGCCAGAGAGGAGGGATGCGTAAGC
193 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
16077499 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
*
16077564 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATG
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATG
* * * * * *
16077629 ACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTATGATTCGGGATTTTTTAAAATTTTTTC
388 ACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
* * * * *
16077694 AGAATGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTGTTTTTGTTGACATGCACAAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
16077759 AATTCAGCTAAAAACTAGAAGTGTACAAGAATTTGTGACCATTTGAAAAAAGTGTCCGCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16077824 GACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* ** *
16077889 TCTCAAGGTTTGATGAGGTTTAGGGGGCCAATTTAAGGGCCAAGTACCAGCAACCCATTCGCACA
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-ACCCA-TCGCAC-
* * *
16077954 ATCAATGTG-TCACA-CCCCCCGG-CCCCCCGATCATCGGAAACCCTAATTG-CGTCGGTCA-GT
710 ATC-ATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGG-AACCCCAA-TGCCGTCGGTCAGGT
* ** * * *
16078014 TCTCCGGTGATGG-GTGCCCGATAAAGAAAAAATTGCGGCACCAGCACCTGCCCGAG-CCAACA-
772 TCTCCGGCGATGGTGT-CCCG-CGAAG-AAAAA-TACGGCACCAGCACATGCCCGAGCCCAGCAT
* *
16078076 GTGGCTGCCGCCA-CCT---T----T-CGGTC-----C---G---G---TCCG-AT-
833 GT-GCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* ** *
16078108 CTTAGACTGGGAATGAACTCCGTATGCCTATGTCAACCCACGAAATAAGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16078173 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCACTACGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * *
16078238 TGCTG-TGACAACCCTTAGTCCAGTCTGATCTTAGACTGGGAATGAACTCGGTAGGCCTAAG-CA
131 TGCTGCCG-CAACCCTCGGT-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * ** * * *
16078301 ACCGACGAAATGAGCGGGTGATCGGGAGGGCACTACGCCGGCCAGAGAGGCGGGATGCGTAAACC
194 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
*
16078366 GTTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* *
16078431 TTTCTGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
324 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
* * *
16078496 CTCGTTTTCTATTTTTCATGATTTTCAACACTTTTTACGGTTCGAGATTTTCTAAAATTTTTTCA
389 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * ** *
16078561 GGAGGAGTTTTAGCCCCAAACTTATTAGACGTGATCCTTGTATTTTTGTTGACATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
16078626 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAACGTGTTCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16078691 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCACAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16078756 CTCAAGGTTTGATGAGGGATAGGGGG-CAACTATAAAGGCCAAGTACCAGCACCCATCGCACATC
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAA-TATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
16078820 ATGTGTGCACACCCCCCCGGCCCCTCCCGATCGTCGGAACCCCAATGCAGTCGATCAGGGGTCTC
713 ATGTGCGCACACCCCCCCGGCCCC-CCCGATCGTCGGAACCCCAATGCCGTCGGTCA-GGTTCTC
* * **
16078885 CGGCGATGGTGTCCCAGTGAAGAAAAATATGGCACCAGCACATGCCAAAGCCCAGCATGTGCTGC
776 CGGCGATGGTGTCCC-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* ** * * *
16078950 CACAACCCTTAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
840 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** * *
16078999 CTAAGATTCAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCCCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16079064 CAGCCAGAGGGGCGGGATGCGTAAGCCAGGGATCGATCGAGTCCCCCTTTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** *
16079129 TGCTATCGCAACCCTCGGTTCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT-AGACCA
131 TGCTGCCGCAACCCTCGG-TCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG-CCA
* * * *
16079193 ACCGACAAAACGAGTGGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGGTGGGATGCGCAAGCC
194 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* **
16079258 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACTGTGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * * *
16079323 TTTCTGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAGGTTTCATGGTAAGACGA
324 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
** * *
16079388 CTCGTTTTCTATTTTTCATGATTTTGGAAACTTTTTACTGTTCGAGATTTTTTAAAATCTTTTCA
389 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * * *
16079453 GGAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAC
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
16079518 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
16079583 GCACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTTTGTGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
16079648 CTCGAGGTTTGATGAGGGATAGGGGGCCAATAGAAGAGCCAAGTACCAGCCCCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
** * ** *
16079713 TGTGCGCACA-CCCCCCGATCCCCCCGATCG-CTGGAACCCCAATGCCGCCTATCAGGGTCTCCG
714 TGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * * ** *
16079776 ACGATGGTGTCCAGGTGAAGAAAAATACGGCACCAGCACATGCCTGAGCCAAGCATGTGCCACAG
778 GCGATGGTGTCC-CGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * *
16079841 CAACCCTCGGTCCGATTCGATCTAAGACTGGGAATGAACTCCGTATG
842 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16079888 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16079953 CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-AGTCGGGTCCCCCTCTGTGTGTTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * *
16080017 CTGCTGCCGCAACCCTCAGTCCAGTCTAATCTTAGACTGGGAATGAACTCCGTACGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGT-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
16080082 ACCCATGAAACGAGCAGGCGGGCGGGCAGACACTACGCCGACCAGAGAGGCGGGATGCGCAAGCC
194 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
16080147 ATGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCGTT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
16080212 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
324 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
* *
16080277 CTCGTTTTCTATTTTTCACGATTTTTAAAAC-TTTTACGGTTCTGA-ATTTTTTTAAATTTTTTC
389 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTC
* * * *
16080340 AAAAGGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCCTGTATTTTTTTTGGCATGCACAAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
16080405 AATTCAGCTAAAAACTCGAAGTGTACCAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
16080470 TACACTTTAATGTCTACTGGCGGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
16080535 TCTCGAGGTTTGATGAGGGGTAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCAGCACCCATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT------A-CCAGCACCCATC
* * * ** * *
16080600 ACACATCATGTGCGCACACCCCCCCGACCCCCCTCTATCACCGGAACCCCAATGACGCCGGTCAG
706 GCACATCATGTGCGCACACCCCCCCGGCCCCCC-CGATCGTCGGAACCCCAATGCCGTCGGTCAG
* ** * * * *
16080665 GTTCTCCGACGATTTTGTCCCGACAAAGAAAAATACGGCACCAGCACATGCCTGAGCCAAACATG
770 GTTCTCCGGCGATGGTGTCCCG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * ** * *
16080730 TGCTACCGTAACCCTCGGTTTGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
834 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16080785 CTTAGACTGGGAATGAACTCCTTATGCCTAACTCAACCCACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * ** * *
16080850 CGGCTAGAAGGGCGGGATGCGCAAGCCAGGGATCGGCCGAGTCCCCCTCTGCGTACTATCAATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * **
16080915 TACTACCGCAACCCTTGGTTCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGG-TCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16080980 CTGACGAAACGAGCGGGCGGGTGGGCGGGCACTA-GCCGGCCAGAGGGGCGGGCACTAGCCGGCC
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG-A-T-G-C-G-C
* * *
16081044 AGAGGGGCG-GGCACTAGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTA
254 A-A--GCCGTGG-A-T-------C-GATA---GGG-TG-G-TAG--GTGG---G-T----T--TA
** * * ** *** * ** * **** **
16081108 GGTGCGT-TTAGGCACATCTTCATATTTC-TGCC-ATGCCAATGCCATTTTTCTGGCTTGTAAAT
288 GGCACATCTT---CATAT-TTC---TGCCATGCCAATGCC-AT-TTTTCTGGCTTGTAAATTCAT
* * *
16081170 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAGGATGACTCGTTTTCTATTTTT
344 ACAA----TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTT
* * * * **
16081235 CACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGTAGCAGTTTTAACCC
405 CATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCC
* * * *
16081300 CAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGAATGCACAAAAAAATTGAGCTAAACACTC
470 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
16081365 GAAGTGTACAAGATTTTGTGACCATTTAAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTAC
535 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
16081430 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
600 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * ** * *
16081495 GGATATGGGGCCAATATAAGGGCCAGGTAATAGCACCCATCGCACATCATGTACGCACA-CCCTC
665 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * * *
16081559 CAGCCCCCCCGATCGTCGGAACCCTAATGTCG-CAGGTCAGGTTCTCCGACAATGGTGTCCCGAT
730 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGATGGTGTCCCG-C
* * * **
16081623 GAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAGCCTCGGTCTAGT
793 GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* *
16081688 CTGATCTTAGACTGGGAATGAACTTCGTATG
858 CCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16081719 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTAAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16081784 CGGCCAGAGGGGCGGGATACGTAAGTCGGGGATCGACCGGGCCCCCCTCTGCGTGCCGCCGATTC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
16081849 TGCTGTCC-CAACCCTCGGTCCGATCTGATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCCA
131 TGCTG-CCGCAACCCTCGGT-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * **
16081913 ACCGACGAAAGGAGCTAGCGGGCGGGCGGGCACT-CTGTCAACCAGAGAGGCGGGATGCGCAAGC
194 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTAC-GCCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
16081977 CGTGGATCGATGGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCGTCATGCCAATGCCAT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
*
16082042 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATG
* ** * * * *
16082107 ACTCGTTTTCTATTTTTCACGATTTTCCAAGCTTTTTACGGTTCGGGATTTTTTAAACTTTTTTT
388 ACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
* * ** *
16082172 AGAAGGAGTTTTGGCCCCAAACTTGGCAGACATGATCCTTGTATTTTTAATGGTATGCACAAAAA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * *
16082237 ATTTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAATAAACTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16082302 GACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
16082367 TCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
** * * *
16082432 ATGTGCGCACA-CCCCCCGGCCCCCCCGATCACCGGAACCCCGATGCCGTCGGTCAGTTTCTCTG
713 ATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * *
16082496 GCGATGGCGTCCCGACAAAGAAAAATACGACACCAGCACATGCCCAAGCCCAGCATGTGCTGTCG
778 GCGATGGTGTCCCG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
16082561 AAACCCTCGGTCCAGTCCGATCTTAGACTGGGAGTGAACTCCATATG
842 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16082608 CTTAGACTCGGAAGGAACTCCTTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
16082673 CGGCTAGAGGGGTGGGATGCGCAACCCGAGGATCGATCGGGTCCCACTCTGTGTGCTACCGATCG
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
16082738 TACTGCCACAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
16082803 TCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGTAAGCCG
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
16082868 TGGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * * * *
16082933 TTCTAGATTGTAAATTCAAACAATGGTCCATTAACCCTTCATGTGAAGTTTCATGGCAAGATGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
* * * *
16082998 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCAAGATTTTTTAAACTTTTTTCAG
390 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * * *
16083063 AAGGATTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAG
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16083128 TTCAGGTAAAAACTC-AATGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAG
520 TTCAGCTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
16083192 ACAATTTAATGGCCACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
16083257 CTGGAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAACA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** * * * *
16083322 TGTGCGCGCACCCCTCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGTTGGTTAGGTTTTCT
714 TGTGCGCACA-CCC-CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* ** *
16083387 GGCGATGGTGTCCCAGGGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCAAGTGCTGCC
777 GGCGATGGTGTCCC-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* ** * * * *
16083452 GCAACCGTCAATCCGATCCGATGTTAGACTGGGAATGAACTTCATATG
841 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16083500 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGTTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16083565 CGACCAGAGGGGCAGGATGCGTAAGCCGAGAATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** *
16083630 TGCTGCCCCAACCCTCGGTCTGGTCTGATCTTAGACTGCTAATGAACTCCGTATGCCTAGGCCAA
131 TGCTGCCGCAACCCTCGGTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
16083695 CCGACGAAACGAGCAGGCGGGTGGGAGGGCACTACGCTGACCAGAGAGGCGGGATGCGCAAGTCG
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
16083760 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTGTGCCATGCCAATGCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
16083825 TTTTGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
** * *
16083890 TCGTTTTCTATTTTTCATGATTTTCGAAACTTCTTACGGTTTGAGATTTTTTAAAATTTTTTCAG
390 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * * *
16083955 AAGGAGTTCTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTCGCATGCACAAAAACA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16084020 TTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16084085 CACTTTAATGGCTACTGGTAGCAAACATGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
16084150 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCGAGTACTAGCACCCATCACACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
16084215 GTTCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAAAGTCGCCGGTCAGGTTCTCCGGC
715 GTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGC
* * * *
16084280 GATGGTGTCCCAACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGTCGCA
780 GATGGTGTCCC-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * *
16084345 ACCCTCGATCCAGT-C---C---GA-T---AATGAACTCCATATG
844 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16084379 CTTAGACTGGAAATGCACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGGGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * ** ** * * * * *
16084444 CGGCCAGAGGGGTAGGATGCGCAAGCCAGGAATCGGCCGAATCCCCCTTTGCGTACTGGCTATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
16084509 TGCTACCGTAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGT-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16084574 CCGACAAAACGAACGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * *
16084639 TGGATCGATAGGGTGCTAGGTGGGTTTAGGGACATCTTCATATTTATGCCATGCCAATACCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * * * *
16084704 TTCTGGCTTGTTAATTCATACAGTGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAAATGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
* * * **
16084769 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTTG
390 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* *
16084834 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC--ACAAAAA
*
16084899 AAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTTC
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTC
* *
16084963 AGACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* ** *
16085028 TTCTCAAGGTTTGATGAGGGATAGGGCACCAATATAAGGGCCAAGTACCAGCACCCATCACACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
16085093 CACGTGCGCACACCCCCCTGACCACCCCGATCATCGAAACCCCAATGCCGTCGGTCAGGTTCTCC
712 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * *
16085158 GGCGATGGTGTCTCGGCAAAGAAAAATACGGCACCAGCACATACCCGAGCCCAGCATGTGCTGTC
777 GGCGATGGTGTC-CCGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
*** * * * *
16085223 GCAATGTTCGGTCCGATCCGATCTTAAACTGGGAATGAACTTCGTACG
841 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16085271 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16085336 CAGCTAGAAGGGCGGGATGCCCAAGCCGGGGATCGGTCGGGTCCCCCTTTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
16085401 TGCTACCACAACCCTCGTTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * * *
16085466 TTGACGAAACGAACGGGCGGACAGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGCCA
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
16085531 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTATGCCATGCCAATACCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
16085596 TTTTTGCTTGAAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
* * * *
16085661 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTATGGTTTGAGATTTTTTAAAATTTTTTTAG
390 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* ** * * *
16085726 AAGGAATTTTGGTACCAAACGTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCATAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16085791 TTCAGCTAAAGACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAGTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16085856 CACTTTAAAGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGT--GTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
16085919 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * ** *
16085984 TTGCGTACACCCCCCC-GCCCCCCCGATCGTCGGAACCCCAATGTCACCGGTCATGTTCTCCGGC
715 GTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGC
* * * * * * * * *
16086048 CATGGTGTCCCGGCGAAGAGAAATATGACACCAGCACATGCTCGAGCCTAGCATGTGCTACTGTA
780 GATGGTGTCCC-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* *
16086113 ACCCTCTGTCCGGTCAGATCTTAGACTGGGAATGAACTCCGTATG
844 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
16086158 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16086223 CAGCCAGAAGGGTC-GGATGCGTAAGTCGGGGATCGACCGGGTCCCCCTCCGTGTGCT-CTCGAT
66 CGGCCAG-AGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGC-CGAT
* * ** ** * *
16086286 CCTGCTACCGTAACCCTCAATCCAATCTGATCTTAGATTGGGAATGAACTCCGTATGGCTAAGCC
129 CCTGCTGCCGCAACCCTCGGT-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
16086351 AACCGACGAAATGA--------GCGGG-GGGCACTACGCCGGCCAGAGAGGCAGGATGCGCAAGC
193 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
16086407 CGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCATATCTTCATATTTTTGCCATGCCAATGCCAT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
*
16086472 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATA
323 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATG
** * * **
16086537 ACTCACTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGAGATTTCATAAAA-TTTTTC
388 ACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
* * * * *
16086601 AGAATGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTAATTTTGTTGGCATGCATAAACA
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
16086666 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAACAAAGAGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16086731 GACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
16086796 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
16086861 ATTTGCGCAGACCCCCCCGGCCCCCTCGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCA
713 ATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* *** * * **
16086926 GTGATGGTGTCCCAATAAAGAAAAATACGACACCAGCACATGCCCGAGCCCACCATGTGCTATCG
778 GCGATGGTGTCCC-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
** * *
16086991 CAACAATCGGTCTGGTCCGATCTTAGACTAGGAATGAA---C---TG
842 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16087032 C---G--T----ATG-----C---T---TAAGTCAACCCACAAAACGAGCATGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
16087077 TGGCGAGAGGGGCGAGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * *
16087142 TACTGCTGTAGCCCTCGATCTGGT-TCGATCTTAGAATGGGAATGAACTCCATATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTC-GGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
16087206 ACCGACGAAACGAACGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGTGGGATGCGCAAGTC
194 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
16087271 GTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAAT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
16087336 TTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
324 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
* * * * *
16087401 CTCATTTTTTATTTTTCATGATTTTTAAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTA
389 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* ** * * *
16087466 GAAGGACTTTTGGTACCAAACGTGGTAGATGTGATCCTTGTATTTTTATTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
16087531 CTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * * * *
16087596 ACACTTTAATTGCTACTAGCAGCAAACCTGTAAAATCTCAAATGTTCTTCAAGGAGGTGTGTGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16087661 CTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCACACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * ** *
16087726 TGTGCGTACACCCCCCCCGCCCCCCCGATCGTCGGAACCCCAATGTTGTCGATCAGGTTCTCCGG
714 TGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGG
* * * *
16087791 TGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGAGCCTAGCATGTGCTGCCAC
779 CGATGGTGTCCCG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * *
16087856 AACCCTCAGTCCGGTCCAATCTTAGACTAGGAATGAACT-C-----
843 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
16087896 C----A-T----ATG----CC-TA----T--GTCAACCCACGAAACGAGCGTGTGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16087941 CGACCAGAGGGACGGGATGCGCAAGCCAGGGATTGACCGGGTCCCCCACTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
16088006 TGCTACCGCAGCCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
16088071 CCGATGAAACGAACAGGCGGGCGGGTGGGCACTACGCTGACCAGAGAGGCAGGATGCGCAAGCCG
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
16088136 TGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGTCATGCCAATGCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
16088201 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
* * * ** ** *
16088266 TCGTTTTCTATTTTTGACGATTTTTAAAACTTTTTACGGTCCGAGATTTGATAAAAAATTTTCAA
390 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
*
16088331 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGAATTTTTGTTGGCATGCACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16088396 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAACGTGTCCCCATTTTAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
16088461 CACTTTAATGGCTACTCGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAA-GGGGTGTGAGTT
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTT
* * * ** *
16088525 CCCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGTGCCCATCGCATATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
16088590 TCTGCGCACACCACCCCCGACCCCCCCAATCGTCGAAACCCTAATGCCGTCGGTCAGGTTCTCCG
714 TGTGCGCACACC-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * * * *
16088655 GCAATGGTGTCCTAGCGAAGAAAAATACGGCTA-CAGTAC-GGCCCAAGCCAAACATGTGCTGCC
778 GCGATGGTGTCC-CGCGAAGAAAAATACGGC-ACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* *
16088718 GTAACCCTCGGTCCGATCCGATCTTAGACT-GG---G-A------ATG
841 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16088755 ---A-ACT-----T----T--GTATGCCTAAGTCGACCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** ** *
16088805 CGGCCAGAAGGACGGGATGCGCAAGCCGGGGATCGACCGGGTTCCCCTCTATGTTTTGCCTATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * * *
16088870 TGCTGCCACAACCCTCAGTCTGGTCCGATCATAAAC-CGGAATGAACTCTGTATGCCTAAGCCAG
131 TGCTGCCGCAACCCTCGGTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** *
16088934 CCGACGAAACGAGCGGGCAGGCGGGCGAGCACTACTTCGGCCAGAGACGCGGGATGCGCAAGCCG
195 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
16088999 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16089064 TTCTGGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
325 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
* * * *
16089129 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTTAAATTTTTTCAG
390 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * * * *
16089194 AAGGACTTTTGGCCCCAAAGTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAATA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
16089259 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16089324 TACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTGAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16089389 TCGAGGTTTAATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
** * *
16089454 GTGCGCACATACCCCCGG-CCCCCCGATTC-CCGGAACCCCAATGCTG-CTGGTCAGGTTCTCCG
715 GTGCGCACACCCCCCCGGCCCCCCCGA-TCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCG
* * * * * *
16089516 ACGATGGTGTCCTGGTGATGAAAAATGCGGCACCAGGACAT-CCTCGAGCCCAGCATGTGCTGCC
778 GCGATGGTGTCC-CGCGAAGAAAAATACGGCACCAGCACATGCC-CGAGCCCAGCATGTGCTGCC
* * * * * *
16089580 ACACCCCCCGATCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATG
841 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16089628 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGCGCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16089693 CTGCCAGAGGGCCGGGATGCGCAACCCGGGGATC-AGCCCGATCCCCC-CTGGCGTGCTGCCAAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCT-GCGTGCTGCCGAT
* * * ** *
16089756 CCTACTGTCGCAACCCTCGGTCTGTTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCC
129 CCTGCTGCCGCAACCCTCGGTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
16089821 AACCGACAAAACGAGCGGGCAGGCGGGCAGGCGGGCGGGCACTACACCTGCCAGAGAGGCGGGAT
193 AACCGACGAAACGAGC--G--GGC--G--GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
* *
16089886 GCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAAATTTCTGCCATGCC
250 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* * * *
16089951 AATGCCATTTTGCTGGCTTGTAAATTAATACAATCGACCCTTAAGCCTTCATGTGAAGTTTCATG
315 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * * *
16090016 GCAAGATGACTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTG-G---------G
380 GCAAGATGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAA
*
16090071 ATTTTTTCAGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
445 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
16090136 CATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTC
510 CA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
16090201 CCCATTTCAGACACTTTAGTGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGG
574 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
16090266 GGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
639 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * *
16090331 TCACACATCATGTGCGCACACCCCCTCGGCCCCCCCGATCATTGGAACCCCAATGCCG-CTTGTC
704 TCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTC
* * ** *
16090395 AGGTTCTCCGACGATGGTGTCTCGACGAAGAAAAATATTGCACCAGCACATGCACGAGCCCAGCA
768 AGGTTCTCCGGCGATGGTGTCCCG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * * ** * *
16090460 TGTGCTGCCGTAACCCTCAGCCCGGTTAGATCTTAGACTGGGAATGATCTCTGTATG
832 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
16090517 C
1 C
16090518 CTAAGCCAAC
Statistics
Matches: 11538, Mismatches: 1461, Indels: 528
0.85 0.11 0.04
Matches are distributed among these distances:
853 7 0.00
854 143 0.01
855 1 0.00
857 1 0.00
858 2 0.00
859 3 0.00
860 5 0.00
861 74 0.01
862 678 0.06
863 797 0.07
864 1192 0.10
865 133 0.01
866 541 0.05
867 167 0.01
868 6 0.00
869 1 0.00
870 1 0.00
871 1 0.00
873 3 0.00
874 4 0.00
875 3 0.00
876 1 0.00
877 183 0.02
878 207 0.02
879 550 0.05
880 128 0.01
881 306 0.03
882 4 0.00
883 3 0.00
885 1 0.00
886 4 0.00
887 361 0.03
888 661 0.06
889 1771 0.15
890 268 0.02
891 180 0.02
892 1728 0.15
893 21 0.00
894 7 0.00
895 33 0.00
896 34 0.00
897 523 0.05
898 3 0.00
899 7 0.00
900 3 0.00
901 2 0.00
902 2 0.00
903 1 0.00
904 2 0.00
905 4 0.00
906 2 0.00
909 4 0.00
911 2 0.00
912 1 0.00
913 3 0.00
914 6 0.00
917 5 0.00
918 3 0.00
920 2 0.00
922 4 0.00
925 2 0.00
926 5 0.00
927 2 0.00
928 1 0.00
929 2 0.00
930 2 0.00
931 3 0.00
932 7 0.00
933 3 0.00
934 322 0.03
935 30 0.00
936 31 0.00
937 6 0.00
938 12 0.00
942 71 0.01
943 246 0.02
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGGTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACT
CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCG
ATGGTGTCCCGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16079894 original size:26 final size:26
Alignment explanation
Indices: 16079865--16079914 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
16079855 ATTCGATCTA
16079865 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
16079891 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
16079915 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.20, G:0.28, T:0.24
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:16081032 original size:23 final size:23
Alignment explanation
Indices: 16081002--16081077 Score: 143
Period size: 23 Copynumber: 3.3 Consensus size: 23
16080992 GCGGGCGGGT
16081002 GGGCGGGCACTAGCCGGCCAGAG
1 GGGCGGGCACTAGCCGGCCAGAG
16081025 GGGCGGGCACTAGCCGGCCAGAG
1 GGGCGGGCACTAGCCGGCCAGAG
16081048 GGGCGGGCACTAGCCGGCCAGAG
1 GGGCGGGCACTAGCCGGCCAGAG
*
16081071 AGGCGGG
1 GGGCGGG
16081078 ATGCGCAAGC
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
23 52 1.00
ACGTcount: A:0.17, C:0.29, G:0.50, T:0.04
Consensus pattern (23 bp):
GGGCGGGCACTAGCCGGCCAGAG
Found at i:16081729 original size:26 final size:26
Alignment explanation
Indices: 16081693--16081745 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16081683 CTAGTCTGAT
*
16081693 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16081719 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16081745 C
1 C
16081746 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16082611 original size:26 final size:26
Alignment explanation
Indices: 16082582--16082634 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
16082572 CCAGTCCGAT
*
16082582 CTTAGACT-GGGAGTGAACTCCATATG
1 CTTAGACTCGGAAG-GAACTCCATATG
*
16082608 CTTAGACTCGGAAGGAACTCCTTATG
1 CTTAGACTCGGAAGGAACTCCATATG
16082634 C
1 C
16082635 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 20 0.83
27 4 0.17
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTCGGAAGGAACTCCATATG
Found at i:16083511 original size:26 final size:26
Alignment explanation
Indices: 16083475--16083526 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16083465 CGATCCGATG
*
16083475 TTAGACTGGGAATGAACTTCATATGC
1 TTAGACTGGGAATGAACTCCATATGC
16083501 TTAGACTGGGAATGAACTCCATATGC
1 TTAGACTGGGAATGAACTCCATATGC
16083527 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.31, C:0.17, G:0.23, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGC
Found at i:16085281 original size:26 final size:26
Alignment explanation
Indices: 16085245--16085294 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
16085235 CCGATCCGAT
*
16085245 CTTAAACTGGGAATGAACTTCGTACG
1 CTTAAACTGGGAATGAACTCCGTACG
*
16085271 CTTAGACTGGGAATGAACTCCGTA
1 CTTAAACTGGGAATGAACTCCGTA
16085295 TGCCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.20, G:0.24, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTACG
Found at i:16086161 original size:26 final size:26
Alignment explanation
Indices: 16086132--16086184 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16086122 CCGGTCAGAT
16086132 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16086158 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16086184 C
1 C
16086185 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16087741 original size:864 final size:865
Alignment explanation
Indices: 16076371--16090587 Score: 15901
Period size: 892 Copynumber: 16.1 Consensus size: 865
16076361 CCCTCACTCC
* * * * *
16076371 GGTCCGGTCTTAGACTGGAAATGAACTTCGTATGCCTAAGTCAACCCACAAAACGTGCGTGCGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * *
16076436 CGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGCGATCCG-TCAGGTCCCCTTCTGTGTTC
66 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT-CGATCGGGTCCCCCTCTGCGTGC
* * * * * * * * * *
16076500 TGGCGATCCTACTGTCGTAACCGTTGGTCTGG-TCCGATCTTAGACTAGGAATGAACTCCGTAAG
130 TGCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * ** * *
16076564 CCTAAGCCAACCGACAAAATGAGCGGGCGGGCGGGCAAGCACTACGCCTGCCAGAGAGGCAGGAT
195 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
* * *
16076629 GCGCAAGCCGTGGATCGAAAAGGTGGTAGGTGGGTTTAGGCACATGTTCATATTTCTGCCATGCC
260 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* * **
16076694 AATGCCATTTTTCTAGCTTGTAAATTCATACAACGGTCTATTAAGCCTTCATGTGAAGTTTCATG
325 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * *
16076759 GCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACATTTTACGGTT-TAGGATTTTTTAA
390 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA-GATTTTTTAA
* *
16076823 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGTTAGACGTGATCCTTGTATTTTTGTTGGCAT
454 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
** * *
16076888 GCGTAAAAAAATTTAGCTAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
519 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
16076953 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAACTGTAAAATCTCAAATGCTCTTTAAGGG
584 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
16077018 GGAGTGAGTTCTC-ATGGTTTGATGAGGGATAAGGGGCCAATAT-AGGCGCCAAGTACCAGCTA-
649 GGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGG-GCCAAGTACCAGC-AC
* *
16077080 CC-TCGCACATCAATGTGC-TACAACCTCCCGCCGG--CCCCCGATGCGTCGGAAACCCCAGTGC
711 CCATCGCACATC-ATGTGCGCAC-ACC-CCC-CCGGCCCCCCCGAT-CGTCGG-AACCCCAATGC
* * * * *
16077141 CATC-GTCAGGTTCTCCGGCGATGGTGTCCAG-CAGAAGCAAAATGCGGCACCAGCAAATTGCCC
770 CGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGAC-GAAGAAAAATACGGCACCAGCACA-TGCCC
** *
16077204 GAG-CCAGCATGTGCTACCGCAACCCTC-AT-T
833 GAGCCCAGCATGTGCTACCGCAACAATCGGTCT
* ** * *
16077234 CGTTTGATCTTAGACTAGGAATGAACT-CGTATGCC-AAGTCCAACCCACGAAATGAGCGTGCGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGT-CAACCCACGAAACGAGCGTGCGG
* *
16077297 GCGCTCCAGCCGGCCAG-GGGGCGGGATGCGCAAGGCGGGGATCGATCGGGTCCCCCACTGCGTG
65 GCGCT-CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTG
* ** ** * * *
16077361 TTATCGATCCTGCTGTGGCAACCCTC-AGTC-CGATCTGATCTTAGACTGGGAATGAACTCGGTA
129 CTGCCGATCCTGCTGCCGCAACCCTCGA-TCTGGTTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * * * *
16077424 GGCCTAAGCCAACCGATGAAACTAGCAGGCGGCCGGGAGGGCACTACGCCGGCCAGAGAGGAGGG
193 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGG
*
16077489 ATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
258 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG
*
16077554 CCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
323 CCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * * *
16077619 TGGCAAGATGACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTATGATTCGGGATTTTTTA
388 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTA
* * * * *
16077684 AAATTTTTTCAGAATGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTGTTTTTGTTGACA
453 AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* *
16077749 TGCACAAAAAAATTCAGCTAAAAACTAGAAGTGTACAAGAATTTGTGACCATTTGAAAAAAGTGT
518 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* *
16077814 CCGCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
583 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* ** *
16077879 GGGTGTGAGTTCTCAAGGTTTGATGAGGTTTAGGGGGCCAATTTAAGGGCCAAGTACCAGCAACC
648 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-ACC
* * *
16077944 CATTCGCACAATCAATGTG-TCACA-CCCCCCGG-CCCCCCGATCATCGGAAACCCTAATTG-CG
712 CA-TCGCAC-ATC-ATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGG-AACCCCAA-TGCCG
* ** * *
16078005 TCGGTCA-GTTCTCCGGTGATGG-GTGCCCGATAAAGAAAAAATTGCGGCACCAGCACCTGCCCG
772 TCGGTCAGGTTCTCCGGCGATGGTGT-CCCGACGAAG-AAAAA-TACGGCACCAGCACATGCCCG
* * * ** *
16078068 AG-CCAACA-GTGGCTGCCGCCACCTTTCGGTCC
834 AGCCCAGCATGT-GCTACCG-CAACAATCGGTCT
* ** *
16078100 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTATGTCAACCCACGAAATAAGTGTGCGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * *
16078165 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCACTACGTGCT
66 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * ** * *
16078230 ACCGATCCTGCTG-TGACAACCCT-TAGTCCAG-TCTGATCTTAGACTGGGAATGAACTCGGTAG
131 GCCGATCCTGCTGCCG-CAACCCTCGA-TCTGGTTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * ** *
16078292 GCCTAAG-CAACCGACGAAATGAGCGGGTGATCGGGAGGGCACTACGCCGGCCAGAGAGGCGGGA
194 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGA
* * *
16078356 TGCGTAAACCGTTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
259 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
*
16078421 CAATGCCATTTTTCTGGCTTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
324 CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * *
16078486 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAACACTTTTTACGGTTCGAGATTTTCTAA
389 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAA
* * ** *
16078551 AATTTTTTCAGGAGGAGTTTTAGCCCCAAACTTATTAGACGTGATCCTTGTATTTTTGTTGACAT
454 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
16078616 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAACGTGTT
519 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
16078681 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCACAAATGCTCTTTAAGGG
584 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
16078746 GGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG-CAACTATAAAGGCCAAGTACCAGCACCC
649 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA-TATAAGGGCCAAGTACCAGCACCC
* * *
16078810 ATCGCACATCATGTGTGCACACCCCCCCGGCCCCTCCCGATCGTCGGAACCCCAATGCAGTCGAT
713 ATCGCACATCATGTGCGCACACCCCCCCGGCCCC-CCCGATCGTCGGAACCCCAATGCCGTCGGT
* * * **
16078875 CAGGGGTCTCCGGCGATGGTGTCCC-AGTGAAGAAAAATATGGCACCAGCACATGCCAAAGCCCA
777 CA-GGTTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
* * *
16078939 GCATGTGCTGCCACAACCCTTAGTCTGGTCT
840 GCATGTGCTACCGCAA--C--AATC-GGTCT
* *
16078970 GATCTTAGACTGGGAATGAACTCCATATG-CTAAGATTCAGAATGAACTCCGTATGCCTAAGTCA
1 GGTC-----C---G-AT---CT---TA-GACT--G----GGAATGAACTCCGTATGCCTAAGTCA
* * * * *
16079034 ACCCACGAAACGAGCGTGCGGGCCCTCAACCAGCCAGAGGGGCGGGATGCGTAAGCCAGGGATCG
44 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
* * ** * *
16079099 ATCGAGTCCCCCTTTGCGTGCTGCCGATCCTGCTATCGCAACCCTCGGT-TCAG-TCTGATCTTA
109 ATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCT-GGTTCTGATCTTA
* * *
16079162 GACTGGGAATGAACTCCGTATGCCT-AGACCAACCGACAAAACGAGTGGGCGGGTGGGCGGGCAC
173 GACTGGGAATGAACTCCGTATGCCTAAG-CCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCAC
*
16079226 TACGCCGGCCAGAGAGGTGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
237 TACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* ** *
16079291 CATCTTCATATTTCTACTGTGCCAATGCCATTTTTCTGGCTTTTAAATTCATACAATGGTCCCTT
302 CATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTT
* * * **
16079356 AAGCCTTCATGTGAGGTTTCATGGTAAGACGACTCGTTTTCTATTTTTCATGATTTTGGAAACTT
367 AAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTT
* * * *
16079421 TTTACTGTTCGAGATTTTTTAAAATCTTTTCAGGAGGAGTTTTGGCCCCAAACTTGGTAGAAGTG
432 TTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* *
16079486 ATCCTTGTATTTTTCTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
497 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
*
16079551 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTAATGGCTACTGGCAGCAAACCTGTAA
562 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* * *
16079616 AATCTCAAATGCTCTTTAAGGGGGTTTGTGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAG
627 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * **
16079681 AAGAGCCAAGTACCAGCCCCCATCGCACATCATGTGCGCACA-CCCCCCGATCCCCCCGATCG-C
692 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC
* ** * * * **
16079744 TGGAACCCCAATGCCGCCTATCAGGGTCTCCGACGATGGTGTCCAGGTGAAGAAAAATACGGCAC
757 -GGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCAC
* * * * * *
16079809 CAGCACATGCCTGAGCCAAGCATGTGCCACAGCAACCCTCGGTCCGATTCGATCTAAGACT
821 CAGCACATGCCCGAGCCCAGCATGTGCTACCGCAA---------C-A----ATC--GGTCT
*
16079870 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACA
1 --G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * *
16079935 AGCGTACGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-AGTCGGGTCCCC
56 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCC
* * * ** *
16079999 CTCTGTGTGTTACCGATCCTGCTGCCGCAACCCTC-AGTCCAG-TCTAATCTTAGACTGGGAATG
120 CTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGA-TCTGGTTCTGATCTTAGACTGGGAATG
* * * * * * *
16080062 AACTCCGTACGCCTAAGCCAACCCATGAAACGAGCAGGCGGGCGGGCAGACACTACGCCGACCAG
184 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAG
* *
16080127 AGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATT
249 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
*
16080192 TCTGCCATGCCAATGCCGTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
314 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
*
16080257 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAAC-TTTTACGGTTCTG
379 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTC-G
* * * *
16080321 A-ATTTTTTTAAATTTTTTCAAAAGGAGTTTTGGCCCCAAACTTGGTTGACGTGATCCCTGTATT
443 AGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* *
16080385 TTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACCAGATTTTGTGACCATTTG
508 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
16080450 AAAAAAGTGTCCCCATTTCATACACTTTAATGTCTACTGGCGGCAAACCTGTAAAATCTCAAATG
573 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
16080515 CTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGGTAGGGGGCCAATATAAGTGCCAAGT
638 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * **
16080580 ACCAGCACCCAGCACCCATCACACATCATGTGCGCACACCCCCCCGACCCCCCTCTATCACCGGA
703 ------A-CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC-CGATCGTCGGA
* * * ** *
16080645 ACCCCAATGACGCCGGTCAGGTTCTCCGACGATTTTGTCCCGACAAAGAAAAATACGGCACCAGC
760 ACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGC
* * * * **
16080710 ACATGCCTGAGCCAAACATGTGCTACCGTAACCCTCGGTTTGGTCTGATCTTAGACT
825 ACATGCCCGAGCCCAGCATGTGCTACCGCAACAATC------G---G----T---CT
* * *
16080767 GGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCTTATGCCTAACTCAACCCACGAAATG
1 -GG--T---C-C-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * ** *
16080832 AGCGTGCGGGCGCTCAGCCGGCTAGAAGGGCGGGATGCGCAAGCCAGGGATCGGCCGAGTCCCCC
56 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCC
* ** * * * * * * **
16080897 TCTGCGTACTATCAATCTTACTACCGCAACCCTTGGT-TCGG-TCCAATCTTAGACTGGGAATGA
121 TCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCT-GGTTCTGATCTTAGACTGGGAATGA
* *
16080960 ACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGTGGGCGGGCACTA-GCCGGCCAGA
185 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGA
* * * *
16081024 GGGGCGGGCACTAGCCGGCCAGAGGGGCG-GGCACTAGCCGGCCAGAGAGGCGGGATGCGCAAGC
250 GAGGCGGG-A-T-G-C-G-CA-A--GCCGTGG-A-T-------C-GATA---GGG-TG-G-TAG-
** * * ** *
16081088 TGTGGATCGATAGGGTGGTAGGTGCGT-TTAGGCACATCTTCATATTTC-TGCC-ATGCCAATGC
289 -GTGG---G-T----T--TAGGCACATCTT---CATAT-TTC---TGCCATGCCAATGCC-AT-T
** * ** * **** ** * * *
16081150 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAGG
334 TTTCTGGCTTGTAAATTCATACAA----TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* **
16081215 ATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
395 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * ** * *
16081280 TTCAGTAGCAGTTTTAACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGAATGCACAA
460 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * *
16081345 AAAAATTGAGCTAAACACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAATGTCCCCATT
525 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
16081410 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
590 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * **
16081475 AGTTCTCAAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAGGTAATAGCACCCATCGCAC
655 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
16081540 ATCATGTACGCACA-CCCTCCAGCCCCCCCGATCGTCGGAACCCTAATGTCG-CAGGTCAGGTTC
720 ATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTC
* * * *
16081603 TCCGACAATGGTGTCCCGATGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCT
784 TCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA--TG-T
* * * *
16081668 GCCGTAAGCCTCGGTCTAGTCTGATCTTAGACT
846 G-C-T-A--C-C-G-C-A-AC-AATC--GGTCT
16081701 GGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
1 -GG--T---C--CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * * *
16081766 AGCGTACGGGCGCTAAGTCGGCCAGAGGGGCGGGATACGTAAGTCGGGGATCGACCGGGCCCCCC
56 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCC
* * * * * *
16081831 TCTGCGTGCCGCCGATTCTGCTGTCC-CAACCCTCGGTC-CGATCTGATCTTAGACTAGGAATGA
121 TCTGCGTGCTGCCGATCCTGCTG-CCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGA
* * ** * **
16081894 ACTTCGTATGCCTAAGCCAACCGACGAAAGGAGCTAGCGGGCGGGCGGGCACT-CTGTCAACCAG
185 ACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTAC-GCCGGCCAG
*
16081958 AGAGGCGGGATGCGCAAGCCGTGGATCGATGGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
249 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
16082023 TCCGTCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
314 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * *
16082088 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCCAAGCTTTTTACGGTTCGG
379 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA
* * * *
16082153 GATTTTTTAAACTTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGCAGACATGATCCTTGTATTT
444 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
** * * *
16082218 TTAATGGTATGCACAAAAAATTTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGA
509 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
16082283 ATAAACTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGC
574 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
16082348 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTA
639 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
** *
16082413 CCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCACCGGAACCCCGATG
704 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * * * * *
16082477 CCGTCGGTCAGTTTCTCTGGCGATGGCGTCCCGACAAAGAAAAATACGACACCAGCACATGCCCA
769 CCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
* **
16082542 AGCCCAGCATGTGCTGTCGAAACCCTCGGTCCAGTCCGATCTTAGACTGGGAGT
834 AGCCCAGCATGTGC--T----A--C-C-G--CA-----A-C--A-A-TCGGTCT
* * * * *
16082596 GAACTCCATATGCTTAGACTCGGAAGGAACTCCTTATGCCTAAGTCAACCCACGAAACGAGCGTG
1 G--GTCC-GAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * * *
16082661 CGGGCGCTTAGTCGGCTAGAGGGGTGGGATGCGCAACCCGAGGATCGATCGGGTCCCACTCTGTG
62 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * *
16082726 TGCTACCGATCGTACTGCCACAACCCTC-AGTCTGG-TCCGATCTTAGACTGGGAATGAACTCCG
127 TGCTGCCGATCCTGCTGCCGCAACCCTCGA-TCTGGTTCTGATCTTAGACTGGGAATGAACTCCG
* * *
16082789 TATGCCTAAGCCAATCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCG
191 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCG
* *
16082854 GGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCCA
256 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* * * * *
16082919 TGCCAATGCCATTTTTCTAGATTGTAAATTCAAACAATGGTCCATTAACCCTTCATGTGAAGTTT
321 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* *
16082984 CATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCAAGATTTTT
386 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTT
* * * *
16083049 TAAACTTTTTTCAGAAGGATTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTTTTGG
451 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * *
16083114 CATGCACAAAAAAGTTCAGGTAAAAACTC-AATGTGTACAAGATTTTGTGACCATTTAAAAAAAG
516 CATGCACAAAAAAATTCAGCTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
16083178 TGTCCCCATTTCAGACAATTTAATGGCCACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
580 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
16083243 AGGGGGTGTGAGTTCTGGAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
645 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * **
16083308 CCCATCGCACAACATGTGCGCGCACCCCTCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGT
710 CCCATCGCACATCATGTGCGCACA-CCC-CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGT
* * * * * **
16083373 TGGTTAGGTTTTCTGGCGATGGTGTCCC-AGGGAAGAAAAATGTGGCACCAGCACATGCCCGAGC
773 CGGTCAGGTTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGC
* *
16083437 CCAGCAAGTGCTGCCGCAACCGTCAATCCGATCCGATGTTAGACT
837 CCAGC-A-TG-T---GCTACCG-CAA--CAAT-CG--G-T---CT
* *
16083482 GGGAATGAACTTCATATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACG
1 -GG--T---C--C-GAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * * *
16083547 AGCATGCGGGCGTTCAACCGACCAGAGGGGCAGGATGCGTAAGCCGAGAATCGATCGGGTCCCCC
56 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCC
* * * **
16083612 TCTGCGTGCTGTCGATCCTGCTGCCCCAACCCTCGGTCTGG-TCTGATCTTAGACTGCTAATGAA
121 TCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAA
* * * * * *
16083676 CTCCGTATGCCTAGGCCAACCGACGAAACGAGCAGGCGGGTGGGAGGGCACTACGCTGACCAGAG
186 CTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAG
* *
16083741 AGGCGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTG
251 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* *
16083806 TGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCATGTGA
316 TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
* * * *
16083871 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTCTTACGGTTTGAGA
381 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGA
* *
16083936 TTTTTTAAAATTTTTTCAGAAGGAGTTCTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTT
446 TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * *
16084001 GTTCGCATGCACAAAAACATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAA
511 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* * *
16084066 AAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGTAGCAAACATGTAAAATCTCAAATGCTC
576 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * *
16084131 TTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCGAGTACT
641 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
16084196 AGCACCCATCACACATCATGTTCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAAAGTC
706 AGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
* * * *
16084261 GCCGGTCAGGTTCTCCGGCGATGGTGTCCCAACGAAGAAAAATGCGGCACCAGCACATGCCTGAG
771 GTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
** * *
16084326 CCCAGCATGTGCTGTCGCAACCCTCGATCCAGTCCGATAAT
836 CCCAGCATGTGCTACCGCAA----C-A---A-T-CGGT-CT
* * * *
16084367 GAACTCCATATGCTTAGACTGGAAATGCACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
1 G--GTCC-GAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* ** * * ** ** *
16084432 GGGGCGCTCAGCCGGCCAGAGGGGTAGGATGCGCAAGCCAGGAATCGGCCGAATCCCCCTTTGCG
62 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCG
* * * * * * * *
16084497 TACTGGCTATCTTGCTACCGTAACCCTCGATCCGG-TCTGATCTTAGACTGGGAATGAACTCTGT
127 TGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAACTCCGT
* * *
16084561 ATGCCTAAGCCAACCGACAAAACGAACGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGG
192 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGG
* * *
16084626 GATGCGCAAGCCGTGGATCGATAGGGTGCTAGGTGGGTTTAGGGACATCTTCATATTTATGCCAT
257 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCAT
* * * * *
16084691 GCCAATACCATTTTTCTGGCTTGTTAATTCATACAGTGGTCCTTTAAGCCTTCACGTGAAGTTTC
322 GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTC
* * * * ** *
16084756 ATGGCAAAATGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT
387 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTT
** *
16084821 AAAATTTTTTTTGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGC
452 AAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* *
16084886 ATGCATAAAAAAAAAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
517 ATGC--ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
*
16084951 TGT-CCCATTTTCAGACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
580 TGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * **
16085015 AAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGCACCAATATAAGGGCCAAGTACCAGC
644 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * * * *
16085080 ACCCATCACACATCACGTGCGCACACCCCCCTGACCACCCCGATCATCGAAACCCCAATGCCGTC
709 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC
* * * *
16085145 GGTCAGGTTCTCCGGCGATGGTGTCTCGGCAAAGAAAAATACGGCACCAGCACATACCCGAGCCC
774 GGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
** * *
16085210 AGCATGTGCTGTCGCAATGTTCGGTCCGATCCGATCTTAAACT
839 AGCATGTGCTACCGCAA---------CAAT-CG---GT---CT
*
16085253 GGGAATGAACTTCGTACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
1 -GG--T---C--CG-A-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * *
16085318 AACGTGCGGGCGCTCAACCAGCTAGAAGGGCGGGATGCCCAAGCCGGGGATCGGTCGGGTCCCCC
56 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCC
* * * * * * *
16085383 TTTGCATGCTGCCGATCCTGCTACCACAACCCTCGTTCTGG-TCCGATCTTAGACTAGGAATGAA
121 TCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAA
** * * * *
16085447 CTCCGTATGCCTAAGCCAATTGACGAAACGAACGGGCGGACAGGCGGGCACTACGCCGACCAGAG
186 CTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAG
* *
16085512 AGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTA
251 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * * *
16085577 TGCCATGCCAATACCATTTTTTTTGCTTGAAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
316 TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
* * * *
16085642 AGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTATGGTTTGAGA
381 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGA
* * ** *
16085707 TTTTTTAAAATTTTTTTAGAAGGAATTTTGGTACCAAACGTGGTAGACGTGATCCTTGTATTTTT
446 TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * *
16085772 ATTGGCATGCATAAAAAAATTCAGCTAAAGACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
511 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* * *
16085837 AAAGTGTCCCCAGTTCAGACACTTTAAAGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTC
576 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
*
16085902 TTTCAGGGGGTGT--GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
641 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * *
16085965 AGCACCCATCGCACATCATTTGCGTACACCCCCCC-GCCCCCCCGATCGTCGGAACCCCAATGTC
706 AGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
** * * * * * * *
16086029 ACCGGTCATGTTCTCCGGCCATGGTGTCCCGGCGAAGAGAAATATGACACCAGCACATGCTCGAG
771 GTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* * **
16086094 CCTAGCATGTGCTACTGTAACCCTCTGTCCGGTCAGATCTTAGACTGGGAAT
836 CCCAGCATGTG---C--T-A--------CC-G-CA-A-C--A-A-TCGGTCT
*
16086146 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
1 G--GTCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * * *
16086211 CAGGCGCTCAGCCAGCCAGAAGGGTC-GGATGCGTAAGTCGGGGATCGACCGGGTCCCCCTCCGT
62 CGGGCGCTCAGCCGGCCAG-AGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGC
* * * *** *
16086275 GTGCT-CTCGATCCTGCTACCGTAACCCTCAATC-CAATCTGATCTTAGATTGGGAATGAACTCC
126 GTGCTGC-CGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAACTCC
* *
16086338 GTATGGCTAAGCCAACCGACGAAATGA--------GCGGG-GGGCACTACGCCGGCCAGAGAGGC
190 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGC
* * * *
16086394 AGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCATATCTTCATATTTTTGCC
255 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC
16086459 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
320 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
** ** * * *
16086524 TCATGGCAAGATAACTCACTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGAGATTTC
385 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTT
* * * *
16086589 ATAAAA-TTTTTCAGAATGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTAATTTTGTTG
450 TTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * * *
16086653 GCATGCATAAACAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAACAAAG
515 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
16086718 AGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTA
580 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
16086783 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
645 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * *
16086848 CCCATCGCACATCATTTGCGCAGACCCCCCCGGCCCCCTCGATCGTCGGAACCCTAATGCCGTCG
710 CCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCG
* * * ** *
16086913 GTCAGGTTCTCCAGTGATGGTGTCCCAATAAAGAAAAATACGACACCAGCACATGCCCGAGCCCA
775 GTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
* *
16086978 CCATGTGCTATCGCAACAATCGGTCT
840 GCATGTGCTACCGCAACAATCGGTCT
* * * * *
16087004 GGTCCGATCTTAGACTAGGAATGAACTGCGTATGCTTAAGTCAACCCACAAAACGAGCATGCGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * *
16087069 CGCTCAGCTGGCGAGAGGGGCGAGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
66 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * *
16087134 GCCGATCCTACTGCTGTAGCCCTCGATCTGGTTC-GATCTTAGAATGGGAATGAACTCCATATGC
131 GCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * *
16087198 CTAAGCCAACCGACGAAACGAACGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGTGGGATG
196 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATG
* *
16087263 CGCAAGTCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
261 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
* *
16087328 ATGCCAATTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
326 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * * * * * *
16087393 CAAGATGACTCATTTTTTATTTTTCATGATTTTTAAAACTTTTTAAGGTTCGGGATTTTTTAAAA
391 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAA
* * ** * * *
16087458 TTTTTTTAGAAGGACTTTTGGTACCAAACGTGGTAGATGTGATCCTTGTATTTTTATTGGCATGC
456 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
*
16087523 ACAAAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
521 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * * * *
16087588 CATTTTAGACACTTTAATTGCTACTAGCAGCAAACCTGTAAAATCTCAAATGTTCTTCAAGGAGG
586 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
16087653 TGTGTGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATC
651 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * ** *
16087718 ACACATCATGTGCGTACACCCCCCCCGCCCCCCCGATCGTCGGAACCCCAATGTTGTCGATCAGG
716 GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
* * *
16087783 TTCTCCGGTGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGAGCCTAGCATGT
781 TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
* * ** * *
16087848 GCTGCCACAACCCTCAGTCC
846 GCTACCGCAACAATCGGTCT
* * * * *
16087868 GGTCCAATCTTAGACTAGGAATGAACTCCATATGCCTATGTCAACCCACGAAACGAGCGTGTGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * *
16087933 CGCTCAGCCGACCAGAGGGACGGGATGCGCAAGCCAGGGATTGACCGGGTCCCCCACTGCGTGCT
66 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * * *
16087998 ACCGATCCTGCTACCGCAGCCCTCGGTCT-GATCCGATCTTAGACTGGGAATGAACTCCGTATCC
131 GCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * * * *
16088062 CTAAGCCAACCGATGAAACGAACAGGCGGGCGGGTGGGCACTACGCTGACCAGAGAGGCAGGATG
196 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATG
* * *
16088127 CGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGTCATGCCA
261 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
16088192 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
326 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * * **
16088257 CAAGACGACTCGTTTTCTATTTTTGACGATTTTTAAAACTTTTTACGGTCCGAGATTTGATAAAA
391 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAA
** * *
16088322 AATTTTCAAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGAATTTTTGTTGGCATGC
456 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
*
16088387 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAACGTGTCCC
521 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
16088452 CATTTTAGACACTTTAATGGCTACTCGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAA-GGG
586 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGG
* * * **
16088516 GTGTGAGTTCCCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGTGCCCAT
650 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * * *
16088581 CGCATATCATCTGCGCACACCACCCCCGACCCCCCCAATCGTCGAAACCCTAATGCCGTCGGTCA
715 CGCACATCATGTGCGCACACC-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* * * * * * *
16088646 GGTTCTCCGGCAATGGTGT-CCTAGCGAAGAAAAATACGGCTA-CAGTAC-GGCCCAAGCCAAAC
779 GGTTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATACGGC-ACCAGCACATGCCCGAGCCCAGC
* * ** *
16088708 ATGTGCTGCCGTAACCCTCGGTCC
842 ATGTGCTACCGCAACAATCGGTCT
* ** * *
16088732 GATCCGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGTCGACCCACGAAACGAGCGTACGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * ** **
16088797 CGCTCAGCCGGCCAGAAGGACGGGATGCGCAAGCCGGGGATCGACCGGGTTCCCCTCTATGTTTT
66 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * * * *
16088862 GCCTATCCTGCTGCCACAACCCTC-AGTCTGG-TCCGATCATAAAC-CGGAATGAACTCTGTATG
131 GCCGATCCTGCTGCCGCAACCCTCGA-TCTGGTTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * ** *
16088924 CCTAAGCCAGCCGACGAAACGAGCGGGCAGGCGGGCGAGCACTACTTCGGCCAGAGACGCGGGAT
195 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
*
16088989 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCC
260 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
*
16089054 AATGCCATTTTTCTGGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
325 AATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
* * * *
16089119 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTTAA
390 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAA
* * * *
16089184 ATTTTTTCAGAAGGACTTTTGGCCCCAAAGTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATG
455 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
16089249 CACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
520 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
16089314 CCATTTCAGATACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTGAAGGGG
585 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
16089379 GTGTGAGTTCTCGAGGTTTAATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
650 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
** * *
16089444 CGCACATCATGTGCGCACATACCCCCGG-CCCCCCGATTC-CCGGAACCCCAATGCTG-CTGGTC
715 CGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGA-TCGTCGGAACCCCAATGCCGTC-GGTC
* * ** * * *
16089506 AGGTTCTCCGACGATGGTGTCCTGGTGATGAAAAATGCGGCACCAGGACAT-CCTCGAGCCCAGC
778 AGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCC-CGAGCCCAGC
* ** *
16089570 ATGTGCTGCCACACCCCCCGATCTGGTCCGATCTTAGATT
842 ATGTGCT---AC-CGCAACAATC--G---G-TC------T
* * *
16089610 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAATG
1 --G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * *
16089675 AGCGTGCGGGCGCGCAGCCTGCCAGAGGGCCGGGATGCGCAACCCGGGGATC-AGCCCGATCCCC
56 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCC
* * * * ** *
16089739 C-CTGGCGTGCTGCCAATCCTACTGTCGCAACCCTCGGTCT-GTTCCAATCTTAGACTAGGAATG
120 CTCT-GCGTGCTGCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATG
* *
16089802 AACTCCGTATGCCTAAGCCAACCGACAAAACGAGCGGGCAGGCGGGCAGGCGGGCGGGCACTACA
184 AACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G--GGC--G--GGCGGGCGGGCACTACG
* *
16089867 CCTGCCAGAGAGGCGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
241 CCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * * * *
16089932 TTCAAATTTCTGCCATGCCAATGCCATTTTGCTGGCTTGTAAATTAATACAATCGACCCTTAAGC
306 TTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * **
16089997 CTTCATGTGAAGTTTCATGGCAAGATGACTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA
371 CTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTA
* * *
16090062 CGGTTTG-G---------GATTTTTTCAGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCC
436 CGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
*
16090117 TTGTATTTTTGTTGGCATGCATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
501 TTGTATTTTTGTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* * *
16090182 ATCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAGTGGCTACTGACAGCAAACCTGTAAAAT
565 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* *
16090247 CTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAG
630 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * * *
16090312 GGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCTCGGCCCCCCCGATCATTGGA
695 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGA
* * * **
16090377 ACCCCAATGCCG-CTTGTCAGGTTCTCCGACGATGGTGTCTCGACGAAGAAAAATATTGCACCAG
760 ACCCCAATGCCGTC-GGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAG
* * * ** * * *
16090441 CACATGCACGAGCCCAGCATGTGCTGCCGTAACCCTCAGCCC
824 CACATGCCCGAGCCCAGCATGTGCTACCGCAACAATCGGTCT
** * * * * *
16090483 GGTTAGATCTTAGACTGGGAATGATCTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGATGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-G-T--G
* *
16090548 CGGGCACTACA-CCGGCCAGAGAGGCGGGATGCGCAAGCCG
62 CGGGCGCT-CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
16090588 TGAATCAATA
Statistics
Matches: 11463, Mismatches: 1490, Indels: 798
0.83 0.11 0.06
Matches are distributed among these distances:
853 5 0.00
854 168 0.01
855 5 0.00
856 4 0.00
858 5 0.00
859 1 0.00
860 3 0.00
861 71 0.01
862 653 0.06
863 842 0.07
864 1223 0.11
865 133 0.01
866 543 0.05
867 195 0.02
868 10 0.00
869 2 0.00
870 7 0.00
871 2 0.00
872 2 0.00
874 1 0.00
875 2 0.00
877 180 0.02
878 208 0.02
879 547 0.05
880 95 0.01
881 305 0.03
882 5 0.00
883 6 0.00
884 7 0.00
885 12 0.00
886 15 0.00
887 343 0.03
888 677 0.06
889 1651 0.14
890 255 0.02
891 175 0.02
892 1682 0.15
893 25 0.00
894 13 0.00
895 44 0.00
896 40 0.00
897 494 0.04
898 6 0.00
899 11 0.00
900 10 0.00
901 3 0.00
902 4 0.00
903 4 0.00
904 3 0.00
905 4 0.00
906 2 0.00
908 2 0.00
909 4 0.00
911 2 0.00
912 1 0.00
913 3 0.00
914 6 0.00
917 5 0.00
918 3 0.00
920 2 0.00
922 4 0.00
925 2 0.00
926 5 0.00
927 2 0.00
928 1 0.00
929 2 0.00
930 2 0.00
931 3 0.00
932 7 0.00
933 3 0.00
934 287 0.03
935 32 0.00
936 33 0.00
937 8 0.00
938 13 0.00
939 1 0.00
940 1 0.00
941 1 0.00
942 72 0.01
943 247 0.02
944 2 0.00
946 1 0.00
947 1 0.00
948 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (865 bp):
GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
GCCGATCCTGCTGCCGCAACCCTCGATCTGGTTCTGATCTTAGACTGGGAATGAACTCCGTATGC
CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATG
CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAA
TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
GCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTACCGCAACAATCGGTCT
Found at i:16089631 original size:26 final size:26
Alignment explanation
Indices: 16089602--16089654 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16089592 CTGGTCCGAT
* *
16089602 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16089628 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16089654 C
1 C
16089655 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Done.