Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168159.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_4, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33012953
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Warning! 65000 characters in sequence are not A, C, G, or T
File 84 of 160
Found at i:16226627 original size:588 final size:590
Alignment explanation
Indices: 16225501--16226632 Score: 1596
Period size: 588 Copynumber: 1.9 Consensus size: 590
16225491 AAATCAGTCT
* **
16225501 AAAACTCCGAAAGTGTACAAGATTTTGGGACCATTTCAGAAAAGTGTCCCCATTTCAGATGCCTT
1 AAAACTCCGAAAGTGTACAAGATTTTGGGACCATTTCAGAAAAGTGTCCCAATTTCAGACACCTT
* *
16225566 AAGGGCTACTGGCAGGAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGC
66 AAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGC
* **
16225631 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGC
131 TTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCAC
* **
16225696 ACACCCCCCGACCCCCCCGGTCACTGAAACCCCAATGCCGCTGGTCAGGTTCTCCGGTGATGGTG
196 ACACCCCCCGACCCCCCCGATCACTGAAACCCCAATGCCGCTGGTCAGGTTCTCCGACGATGGTG
* *
16225761 TCTCGATGAAGAAAAATATGGCACCAACACATGCCCGAGCCCAGCATGTGCTACAGTAACCCTCG
261 TCTCGATGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTACAGCAACCCTCG
* *
16225826 GTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCTAAGACTGGGAATGAACTCTGTATGC
326 GTCTGGTCCAATCATAGACTGGGAATGAACTCCATATGCTAAGACTGGGAATGAACTCCGTATGC
* * *
16225891 CTAAGTCAACCCACGAAACGAGCGTACGAGCGCCCAGCCAGCCAGACGGGTCGGATGCACAAGTC
391 CTAAGTCAACCCACGAAACGAGCGTACGAGCACCCAGCCAGCCAGACGGGGCGGATGCACAAGCC
* * * ** * **
16225956 GAGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTTTCGCAACCTTCGGTTTGATCTG
456 GAGGATCGACCGGGTCCCCCTCTACATGCTACCGATCCTACTACCGCAACCCTCGGTCCGATCTG
16226021 ATCTTAGACTGGGAATGAACTCCGGTTCGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
521 ATCTTAGACTGGGAATGAACTCCGGTTCGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
16226086 AGCTA
586 AGCTA
* * * * *
16226091 AAAACT-CG-AAGTGTAGAAGATTTTGTGACCATTTGA-AAAGAGTTTCCCAATTTCAGACACTT
1 AAAACTCCGAAAGTGTACAAGATTTTGGGACCATTTCAGAAA-AGTGTCCCAATTTCAGACACCT
*
16226153 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAG
65 TAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAG
* *
16226218 GTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATCATGTGCA
130 CTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCA
* * * * *
16226283 CTCACCCCCCGGCCCCCCCGATC-GTCGGAACCCCAATGCCG-TCGGTCAGGTTCTCTGACGATG
195 CACACCCCCCGACCCCCCCGATCACT-GAAACCCCAATGCCGCT-GGTCAGGTTCTCCGACGATG
* * * * *
16226346 GTGTC-CTGGTGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGTATGTGCTACCGCAACC
258 GTGTCTC-GATGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTACAGCAACC
* *** *
16226410 CTCGGTCTGGTCCGATCATAGACTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGT
322 CTCGGTCTGGTCCAATCATAGACTGGGAATGAACTCCATATGCTAAGACTGGGAATGAACTCCGT
* * * * * * * **
16226475 ATGCCTAAGTTAACCGACGAAATGAGCGTGCGGGCACTCAGCCGGCCAGA-GGGGCGGGATGCGT
387 ATGCCTAAGTCAACCCACGAAACGAGCGTACGAGCACCCAGCCAGCCAGACGGGGC-GGATGCAC
* * *
16226539 AAGCCGGGGATCGACTGGGTCCCCCTCTACATGCTACCGATCCTGCTACCGCAACCCTCGGTCCG
451 AAGCCGAGGATCGACCGGGTCCCCCTCTACATGCTACCGATCCTACTACCGCAACCCTCGGTCCG
*
16226604 GTCCT-ATCTTAGACTGGGAATGAACTCCG
516 AT-CTGATCTTAGACTGGGAATGAACTCCG
16226633 TATGTCTAAG
Statistics
Matches: 474, Mismatches: 62, Indels: 14
0.86 0.11 0.03
Matches are distributed among these distances:
587 10 0.02
588 454 0.96
589 4 0.01
590 6 0.01
ACGTcount: A:0.26, C:0.27, G:0.25, T:0.23
Consensus pattern (590 bp):
AAAACTCCGAAAGTGTACAAGATTTTGGGACCATTTCAGAAAAGTGTCCCAATTTCAGACACCTT
AAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGC
TTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCAC
ACACCCCCCGACCCCCCCGATCACTGAAACCCCAATGCCGCTGGTCAGGTTCTCCGACGATGGTG
TCTCGATGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTACAGCAACCCTCG
GTCTGGTCCAATCATAGACTGGGAATGAACTCCATATGCTAAGACTGGGAATGAACTCCGTATGC
CTAAGTCAACCCACGAAACGAGCGTACGAGCACCCAGCCAGCCAGACGGGGCGGATGCACAAGCC
GAGGATCGACCGGGTCCCCCTCTACATGCTACCGATCCTACTACCGCAACCCTCGGTCCGATCTG
ATCTTAGACTGGGAATGAACTCCGGTTCGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
AGCTA
Found at i:16228731 original size:864 final size:859
Alignment explanation
Indices: 16226639--16229708 Score: 4488
Period size: 865 Copynumber: 3.6 Consensus size: 859
16226629 TCCGTATGTC
*
16226639 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACT
1 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACT
* * * * * *
16226704 TTTTA-TGTTCAAGATTTTTTAAAATTTTTTCAGAAGGATTTTTTGCCCCAAACTTGCTAGACGT
66 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGT
*
16226768 GATCCTTGTATTTTTGCTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
131 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* * * *
16226833 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACGGGCAACAAACCTATA
196 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTA
* * *
16226898 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAAGGACAGGGGGCCAATA
261 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* ** * * * **
16226963 TAAGGGCCAAGTACCACCACCCATCATACATCATGTGTGCACACCCCCCGACCCCCCAATCGCCG
326 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGGGCGCACACCCCCCGGCCCCCCAATCATCG
* * * * *
16227028 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTATCCTGATGAAGAAAAATGCGGCACCA
391 GAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGGTATCCCGACGAAGAAAAATACGGCACCA
** * * * *
16227093 GCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCATCAATCCAAG-CCGATCTTAGATTGGGAT
456 GCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCAATCC-TGTCTGATCTTAGATTGGGAA
* * * *
16227157 TGAACTCTGTATGCCTAAGTCAA-CACACGAAATGAGCGTGCGGGTGCTCAGCCAACCAGAGGGG
520 TGAACTCCGTATGCCTAAGTCAACCA-ACGAAATGAGCGTGCGGGCGCTCAGTCGACCAGAGGGG
* * * * * *
16227221 TGGGATGCGCAAGTCGGGGATCGACCGAGTCCCCCTCTGCATGCTATCGATCCTGTTACCGTAAC
584 TGGGATGCGCAAGCCGGGGATCGGCCG-GT-CCCCTCTGCGTGCTGTCGATCCTGCTATCGTAAC
* * * * * *
16227286 CCTCGGTCTGGTCTGATCTTAGATTGTGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA
647 CCTCAGTTTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * *
16227351 GCGGGC-G-GA-CGGGCACTATGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCAATAGGG
712 GCGGGCGGCGAGCGGGCACTACGTCGGCCAGAGAGGCGGGATACGCAAGCCATGGATCGATAGGG
* *
16227413 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACTACGCCAATGCCATTTTTCTGGCTTGTAA
777 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATTATGCCAATGCCATTTTTCTGGCTTGTAA
16227478 ATTCATACAATGGTCCCT
842 ATTCATACAATGGTCCCT
16227496 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG-AAAC
1 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTGAAAAC
* * ** *
16227560 TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGAAGTTTTGGTACCAAACTTGGTAGACG
65 TTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACG
* *
16227625 TGA-CCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATT
130 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* *
16227689 TTGTGACCATTTGAAAAAAGTGTCCTCATTCCAAACACTTTAATGGCTACTGGCAGCAAACCTGT
195 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
16227754 AAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCCAAT
260 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * *
16227819 ATAAGGGCCAAGTACCAGCACCCATTGCACATCATGGGCGCCCACCCCCCGGTCCACCTCAATCA
325 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGGGCGCACACCCCCCGG-CC-CCCCAATCA
* * * * * * **
16227884 TCGAAACCCTAATGCCGTCGATCAAGTTCTTCGGTGATGGTGTCCCGGTGAAGAAAAATACGGCA
388 TCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGGTATCCCGACGAAGAAAAATACGGCA
* * * * *
16227949 CCGGCACATGCCCGAGCCTAGTATGTGCTGCCACAACCCTCAGTCCTGTCTGATCTTAGATTTGG
453 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCAATCCTGTCTGATCTTAGATTGGG
* *
16228014 AATGAACTCCGTATGCCTAAGTCAACCAACGAAATGAGCGTGCGAGCGTTCAGTCGACCAGAGGG
518 AATGAACTCCGTATGCCTAAGTCAACCAACGAAATGAGCGTGCGGGCGCTCAGTCGACCAGAGGG
* *
16228079 GTGGGATGCGCAAGCCGGGGATCGGCCAGGTCACCCTCTGCGTGCTGTCGATCCTACTGTCGTAA
583 GTGGGATGCGCAAGCCGGGGATCGGCC-GGTC-CCCTCTGCGTGCTGTCGATCCTGCTATCGTAA
*
16228144 CCCTCAGTTTGATCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAACCGACGAAACG
646 CCCTCAGTTTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* *
16228209 AGCGGGCGGACGAGCGGGCACTACGTCGGCCAGAGAGGCGGGATACACAAGCCTTGGATCGATAG
711 AGCGGGCGG-CGAGCGGGCACTACGTCGGCCAGAGAGGCGGGATACGCAAGCCATGGATCGATAG
* *
16228274 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATTGTGCCAATGCCATTTTTTTGGCTTGT
775 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATTATGCCAATGCCATTTTTCTGGCTTGT
*
16228339 AAATTCATACAATGGTCCTT
840 AAATTCATACAATGGTCCCT
* *
16228359 TAAGCCTTCATGTGAAGTTTCATTGTAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACT
1 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACT
*
16228424 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGATGT
66 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGT
* *
16228489 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGGAGTGTACAAGATTT
131 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
16228554 TGTGACCATTTGAAAAAAGTGTCCCCA-TTCTAAACACTTTAATGGCTACTGGCAGCAAACCTGT
196 TGTGACCATTTGAAAAAAGTGTCCCCATTTC-AAACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
16228618 AAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCATGAGGGATAGGGGGCCAAT
260 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* *
16228683 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGGGTGCACACCCCCCGGCCCACCCCGATCA
325 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGGGCGCACACCCCCCGG-CC-CCCCAATCA
* * * * * * *
16228748 TCGGAACCCAAATGTCGTCGGTCAGGTTTTCTGGTGATGGTGTCCCGACGAAGAAAAATACAGCA
388 TCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGGTATCCCGACGAAGAAAAATACGGCA
* * * * *
16228813 CCAGCACATGCCCGAGCCCAGTATGTACTACTGCA-AACCCTCAATCTTGTCTGATCTTAGACTG
453 CCAGCACATGCCCGAGCCCAGCATGTGCTGC--CACAACCCTCAATCCTGTCTGATCTTAGATTG
* * * * *
16228877 GGAATGAACTCCTTATGCCTAAGTGAACCAACGAAACGAGCGTGCGGGCACTCAATCGACCAGAG
516 GGAATGAACTCCGTATGCCTAAGTCAACCAACGAAATGAGCGTGCGGGCGCTCAGTCGACCAGAG
* * * * *
16228942 GGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCTCCTCTACGCGCTGTCGATCCTGCTATCGT
581 GGGTGGGATGCGCAAGCCGGGGATCGG-CCGGTCC-CCTCTGCGTGCTGTCGATCCTGCTATCGT
* * *
16229007 AACCCTTAGTTCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
644 AACCCTCAGTTTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
16229072 CGAGTGGGCGGCCGGGCGGGCACTACGCCGGCCAGAGAGGCAGGATACGCAAGCCATGGATCGAT
709 CGAGCGGGCGG-CGAGCGGGCACTACGTCGGCCAGAGAGGCGGGATACGCAAGCCATGGATCGAT
*
16229137 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATCATGCCAATGCCATTTTTCTGGCTT
773 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATTATGCCAATGCCATTTTTCTGGCTT
*
16229202 GTAAATTCATACAATTGTCCCT
838 GTAAATTCATACAATGGTCCCT
* * * * * *
16229224 TAAGCCTTCATGTGAAGTTTCATTGTAAGACGACTCCTTTTTTATTTTTCACGATTTTCAAAACT
1 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACT
*
16229289 TTTTACGGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGT
66 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGT
16229354 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
131 GATCCTTGTATTTTTGTTGGCATGCAC--AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
16229419 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATTGCTACTGGCAGCAAACCTG
194 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTG
* *
16229484 TAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAA
259 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
16229549 TATAAAGGCCAAGTACCAGCACCCACCGCACATCATGTGCGCACACCTCCCCCGGCCCCCCAATC
324 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGGGCGCACA-C-CCCCCGGCCCCCCAATC
* * * * *
16229614 GTCGGAACCCTAAT-CCGCCGGTCAGGTTCTCCAGCGATGGTATCCCGACGAAGAAAAATGCGGA
387 ATCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGGTATCCCGACGAAGAAAAATACGGC
**
16229678 ACCAGCACATGCTTGAGCCCAGCATGTGCTG
452 ACCAGCACATGCCCGAGCCCAGCATGTGCTG
16229709 ACGCAATTCT
Statistics
Matches: 1994, Mismatches: 195, Indels: 39
0.89 0.09 0.02
Matches are distributed among these distances:
857 285 0.14
858 60 0.03
859 286 0.14
860 4 0.00
862 7 0.00
863 245 0.12
864 321 0.16
865 489 0.25
866 69 0.03
867 215 0.11
868 6 0.00
869 7 0.00
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Consensus pattern (859 bp):
TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGAAAACT
TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGT
GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTA
AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCGCACATCATGGGCGCACACCCCCCGGCCCCCCAATCATCG
GAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGGTATCCCGACGAAGAAAAATACGGCACCA
GCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCAATCCTGTCTGATCTTAGATTGGGAAT
GAACTCCGTATGCCTAAGTCAACCAACGAAATGAGCGTGCGGGCGCTCAGTCGACCAGAGGGGTG
GGATGCGCAAGCCGGGGATCGGCCGGTCCCCTCTGCGTGCTGTCGATCCTGCTATCGTAACCCTC
AGTTTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
GCGGCGAGCGGGCACTACGTCGGCCAGAGAGGCGGGATACGCAAGCCATGGATCGATAGGGTGGT
AGGTGGGTTTAGGCACATCTTCATATTTCTATTATGCCAATGCCATTTTTCTGGCTTGTAAATTC
ATACAATGGTCCCT
Found at i:16230504 original size:26 final size:26
Alignment explanation
Indices: 16230454--16230506 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16230444 CCTATCCGAT
* **
16230454 CTTAGATTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16230480 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16230506 C
1 C
16230507 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16231371 original size:26 final size:26
Alignment explanation
Indices: 16231342--16231394 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16231332 TCGGTCCGAT
* * *
16231342 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16231368 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16231394 C
1 C
16231395 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16231959 original size:26 final size:26
Alignment explanation
Indices: 16231921--16231973 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16231911 CCGGTCCGAT
* *
16231921 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16231947 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16231973 C
1 C
16231974 CTAAGAAAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16232846 original size:26 final size:26
Alignment explanation
Indices: 16232810--16232862 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16232800 CCGGTCCGAT
*
16232810 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16232836 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16232862 C
1 C
16232863 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16233479 original size:889 final size:886
Alignment explanation
Indices: 16231501--16244446 Score: 13875
Period size: 889 Copynumber: 14.5 Consensus size: 886
16231491 CCGATCTTGC
* *
16231501 AATTTTGTCAGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
*
16231566 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATC
66 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
16231631 CCCATTTCAGACACTTTAGTGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
131 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
16231696 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG-CAAGTACCAGCACCCA
196 GGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * *
16231760 TCACACATCATGTGCGCACACCCCCCTCGGTCGCCCTGATCGTCGAAACCCCAATGTCGCCGGTC
260 TCGCACATCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCGT-GGAACCCCAATGCCGCCGGTC
* * * *
16231825 AAGTTCTCCGGCGATGGTGTCCCGACGAAGAAACATGCGGCACCAGCACATGCCCGAGCCCAGCA
322 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * *
16231890 TGTGCTGTCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACT
387 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* ** * *
16231955 AGGAATGAACTCCGTATGCCTAAGAAAACCCACGAAACGAGCGTGTGGGCGCTCAGTCGGCCAGA
452 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * * * * *
16232020 GGGGCCGAAGGCGCAAGTCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCAATCTTGCTACCG
517 GGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCG
* * * *
16232085 CAACCCTTGGTTTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
582 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* *
16232150 ACGAGCGGGCGGGCAGGCGGGCACTAC-TCCGGCTAGAGAGGCGGGATGCGCAAGCCGTGGATCG
647 ACGAGCGGGC-GGCGGGCGGGCACTACGT-CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
16232214 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCATGCCAATGCCATTTTTCTGGC
710 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* * *
16232279 TTTTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCGAGACGACTCGTTTT
775 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* *
16232344 CTATTTTTCACGATTTTTGAAACTTTTTAAGGTTCAGGATTTTTTAA
840 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * * *
16232391 AACTTTTTT-GGAAAGAGTTCT-GCTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTAGGC
1 AA-TTTTTTCAGAAGGAGTTTTGGC-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
* * * *
16232454 ATGAACAAAAACATTCAGCTAAAAACTCGAAGTGT-CTAAGATTTTGTTACCATTTTAAAAAAGT
64 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC-AAGATTTTGTGACCATTTGAAAAAAGT
* * * *
16232518 GTCCCCATTCCAGACACTTTAATGGCTACTCGTAGCAAACCTGTAAAATCTCAAATTCTCTTTAA
128 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
16232583 GGGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAGGGCGCCAATATAAGGGCCAAGTACTAGCAC
193 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG-GCCAATATAAGGGCCAAGTACCAGCAC
* * ** * * *
16232648 CCATCACACATCATGTGCCCACACCCCCCAACCCCCCCAATCGCTGGAACCCCAATGCCACCGAT
257 CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCG-TGGAACCCCAATGCCGCCGGT
* * * * * *
16232713 TAGGTTTTTCGACAATGGTGTCCCGACGAAGAAAAATACGGCACCACCACATGCCCGAGCCCAGT
321 CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGC
* *
16232778 ATGTGCTACCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
386 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* *
16232843 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAA
451 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * * *
16232908 AGGGGCGGGATGCGCAAGCCGAGGATCAGTCGGGTCCCTCTCTGCGTGCTACCAATCCTACTATC
516 AGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* ** * * * *
16232973 GTAACCCTCGGTCTGGTCCAATCTTAGACTGGCAATGAACTTCATAAGCCTAAGCCAACCGACGA
581 GCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * *
16233038 AACGAGCAGGCGGCGGGTGGGCACTATG-CAGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
646 AACGAGCGGGCGGCGGGCGGGCACTACGTC-GGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
16233102 ATAGGGTGGTAGGTGTGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGC
710 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
** *
16233167 TTACAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTATGGCAAGACGAGC-CGTTT
775 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA-CTCGTTT
**
16233231 TCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAA
839 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * *
16233279 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGCGATCCTTGTATTTTTTTTTTGGA
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--TTTTTGTTGGC
* *
16233344 AAGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
64 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
*
16233409 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACATGTAAAATCTCAAATGCTCTTTAA-
129 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
16233473 GGGGTGTGAGTTC-CTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAC
194 GGGGTGTGAGTTCTC-GAGGTTTGATGAGGGAT-AGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * * * *
16233537 CCATCGCACGTGATGCGTGCACACCCCCCGGCCCCCCC-ATTAC-CGGAACCCCTATACCGCCGG
257 CCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGA-T-CGTGGAACCCCAATGCCGCCGG
* * * *
16233600 TCAAGTTCTCTGGC-AGTGGTGTCCCGACGAAAAAAAATAC-G-----G--CA--CCCGAGCCCA
320 TCAGGTTCTCCGACGA-TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
* * * * * ** *
16233654 GTATGTACTGCCGCAACCCTCAGTCCGATCCAATCTTAGACTCAGAATGAACTCTGTATGCTTAG
384 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * * *
16233719 ACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGAAACGAGCGTGCAGGCACTCAGTCAGCC
449 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* ** ** * * *
16233784 AGAGCGGCGGGATGCGCAAGTTG-GAGATCGACCGAGTCCCCCTCTGTGTGCTGCCAATCCTGCT
514 AGAGGGGCGGGATGCGCAAGCCGAG-GATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* *
16233848 GCCGCAACCCTCGATCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
578 ACCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * ** * * * * **
16233912 ATGAAACAAGCGGGCGGAAGGGATGGCACCACGTCGACCAAAGAGGTGGGATGCGCAAGCTATGG
642 ACGAAACGAGCGGGCGG-CGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
*
16233977 ATCCATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
706 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
* *
16234042 TGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGACGACTCG
771 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * * * *
16234107 TTTTTTATTTTTCTCAATTTTTGAAACTTTTTACAGTTCGAGAATTTTTAA
836 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* ** * *
16234158 AATCTTTTCAGAAGGAGTTTCAGCCACAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCAT
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* *
16234223 GCACAAAAAACTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTC
66 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
16234288 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
131 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * * *
16234353 GGTGTGAGTTCTCGATGTTTGATGAGGGATAGGGGGCCAGTACAAGGGCCAAGAACCAGCACCCA
196 GGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * *
16234418 TCGCACATCTTGTGCACACACCCCCCAGCCCGCCCGATCGTCGGAACCCCAATGGCGTCGGTCAG
260 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGT-GGAACCCCAATGCCGCCGGTCAG
* * * *
16234483 GTTCTCCGACGATGGTGTCTCGACGAAGAAAAATGCGACACCAGCACATGCCCAAGCCCAGCATG
324 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
16234548 TGCTGCCGCAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
389 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* ***
16234613 GAATGAACTCCGTATGCCTAAGTCAACCCACGAACCGAGCGTGCGGGCGCTCAATTGGCCAGAGG
454 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
16234678 GGCAGGATGCGCAAGCTGGGGATCGATCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCA
519 GGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCA
** * * * *
16234743 ACCCTCCATCCGGTCCGATCTT-GTACTGGGAATGAACTCTGTATGACTAAGCCAACCGACGAAA
584 ACCCTCGGTCTGGTCTGATCTTAG-ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
16234807 CGAGCGGGCGGGCGGGCGGGCGAGTGGGCACTACGCCGGTCAGAGAGGCGCGATGCGCAAGCCAT
648 CGA----GCGGGC-GGCGGGC----GGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGT
16234872 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
704 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
* * *
16234937 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTCCATGGGAAGATGACT
769 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * *
16235002 CGTTTTCTATTTTTCACGATTTTTGAAACTTTCTACGGTTTGGGATTTTTCAA
834 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* *
16235055 AAATTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCAT
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* *
16235120 GCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTC
66 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
16235185 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
131 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
16235250 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * * **
16235315 TGCACATCATGTGTGCACACCCCCTCCGGCCACCCCCGATCATCGGAACCCTAATGTCATCGGTC
261 CGCACATCATGTGCGCACA-CCCC-CCGGCC-CCCCCGATCGT-GGAACCCCAATGCCGCCGGTC
* * * ** ** *
16235380 AGGTTCTCCGGCAATGGTGTCCTGTTGAAGAAAAATGTGGCACCAACACATTGCCCGAGCCCAGC
322 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACA-TGCCCGAGCCCAGC
* * * * * *
16235445 ATGTGCTGCCGCAACCCTCGGTTCAGTCTGATCTTAGTCTGGGAATCAACTTCGTATGCTTAGAC
386 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * *
16235510 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGGGCTCAACCGGCTAG
451 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * *
16235575 AGTGGTGGGATGCGCAAGCC-AGGGATTGGTCGGGTCCCCCTCTGCGTGCTGCTGATCCTACTAC
516 AGGGGCGGGATGCGCAAGCCGA-GGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAC
* * *** * ** * *
16235639 CGCAACCCTCAGCCCAATCTAATCTTAGACTGGGAATGAACTTAGTATGCCTAAGGCAACTGACG
580 CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * *
16235704 AAACGAGAGGGCGGACAGGTGGGCACTACGTCGGTCAGAGAGACGGGATGCGCAAGCCGTGGATC
645 AAACGAGCGGGCGG-CGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* ** *
16235769 GATAGGGTGGTAGGTGGATTTAGTTACAGCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
709 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
*
16235834 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCGTGGCAAGACGACTCGTTT
774 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
16235899 TCTATTTTTCACGATTTTTGAAACTTTTTACAGTTCGAGATTTTTTAA
839 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
16235947 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * *
16236012 GCACAAAAAATTTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTC
66 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
16236077 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTTAAATCTCAAATGCTCTTTAAGGG
131 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
16236142 GGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
196 GGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCC-
* * * ** * * *
16236207 AT-GCACATCATGGGCGCACACCCCCTGACCCCCCCGATCACCGGAACCCCGATACTGCCGGTCA
259 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC-GTGGAACCCCAATGCCGCCGGTCA
* * * *
16236271 GGTTCTCCGATGATGGTGTCTCAACGAAGAAAAATACGGCACGAGCACATGCCCGAGCCCAGCAT
323 GGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAT
**
16236336 GTGCTGGTGCAA-CC-C--T-C-G---G----T---CT--G---G---TCC-TAT-CTTAGACTG
388 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* *
16236375 GGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAG
453 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* **
16236440 GGGCGGGATGCGCAAGCC-AGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACTA
518 GGGCGGGATGCGCAAGCCGA-GGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCG
* * * *
16236504 CAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTACGCCTAAGCCAACCGACGAA
582 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
16236569 ACGAACGGGCAAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGCATGCGCAAGCCGTGGATCGA
647 ACGAGCGGGC-GGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
*
16236634 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCT
711 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
*
16236699 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGACGACTCGTTTTC
776 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
*
16236764 TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
841 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
*
16236810 AACTTTTTT-AGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
1 AA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
16236874 TGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
65 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
*
16236939 CCCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-G
130 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
16237003 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGCACCAGCACCC
195 GGGTGTGAGTTCTCGAGGTTTGATGAGGGAT-AGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * *
16237068 ATCGCACATCATGTGCGTACACCCCCCAGCCCCCTCGATCGCCGGAACCCCAATGCCGTCGGTCA
259 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCG-TGGAACCCCAATGCCGCCGGTCA
*
16237133 GGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATTCCCGAGCCCAGCAT
323 GGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAT
** * * * * *
16237198 GTAATGCCGCAACCCTCGGTCCGGTCCAATCTTATACTGAGAATGAACTTCATATGCTTAGACTG
388 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * *
16237263 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTTAGCCGGCCGGAG
453 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* *** ** * * * * *
16237328 GAGCGGGATGCGCAAATTGAGGATCGACCAGGTCCCCCTCTGCGTGTTGCCAATCTTGCTATCGC
518 GGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGC
* * * * *
16237393 AACCGTCGGTCTGGTCTGATCTTAGACTAGGATTGAACTTCGTATGCCTAAGCCAACCGATGAAA
583 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
16237458 CGAGCGGGCGGGCGGACGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGTCGTGGATCGAT
648 CGAGCGGGC-GGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * ** *
16237523 AGGGTGGTAGGTAGATTTAGTTACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTC
712 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
*
16237588 GTAAATTCATATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
777 GTAAATTC--ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * *
16237653 GTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTA
840 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* *
16237700 AATTTTTTCAGAATGCA-TTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCA
1 AATTTTTTCAGAA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
16237764 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGTTTTTGTGACCATTTGAAAAAAGTGT
65 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * *
16237829 CCCCATTTCAGATACTTTGA-GGTCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAG
130 CCCCATTTCAGACACTTTAATGG-CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* *
16237893 TGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
194 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * *
16237958 CATCGCACATCATGTGCGCACACCCCCCCGACCACCCCCAATCGCCGGAACCCCAATACCGTCGG
258 CATCGCACATCATGTGCGCACA-CCCCCCGGCC-CCCCCGATCG-TGGAACCCCAATGCCGCCGG
* * *
16238023 TCAGGTTCTCCGGCGATGGTGTCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
320 TCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
* * * *
16238088 CATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGATTGGCAATGAACTCCGTATGCTTAGG
385 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * *
16238153 CTGGGAATGAACTCCGTACGCCTAAGTCAACCCATGAAACGAGCGTGCGGGGGCTCAGTCGGCCA
450 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * * *
16238218 GAGGGGCGGGATGCGCATGCC-AGGATTGGTCGGGTCCCTCTTTGCGTGCTGCCAATCCTGCTGC
515 GAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAC
* * * * * *
16238282 CGTAACCCTCGATCCGGTCCGATCTTAGTCCGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
580 CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC-----CT---AA-G-
* * * * * *** ** * *
16238347 ACTTCGTATGCCTATGTCAACCCATG-AAACGAGCGTACGGGCACT-CAATCGGCCAGAGGGGCG
635 -C--C--A-ACCGACG--AAACGA-GCGGGCG-GCGGGCGGGCACTAC-GTCGGCCAGAGAGGCG
* * * * ** * * * *
16238410 TGACGCGTAAGCCGGGGATCAGCCAGGTCCCCTCTGTGT-GCTGCCGATCTT-GCTGCTACAACC
689 GGATGCGCAAGCCGTGGATC-GATAGG------GTG-GTAGGTG--GGT-TTAG--GC-AC-A-T
* * *** ** * ***** * * * ** *** ***
16238473 CTTGGTCCTGTCTGATCTTAGATTGGGAATG-AAGCCAACCGAC--GAAAAGAGCGGGCGGGCGG
738 C-T--TCATAT-T--TCTGCCA-TGCCAATGCCATTTTTCTGGCTTGTAAA-TTCATAC-AATGG
* * ** * * **** * * **
16238535 GCGGGCAC-TACGCCGGCCA-GAGAGGCGGGATGCGCAAGCCGTGGA-TCGATAGGGTGGTAGGT
794 TC---C-CTTAAGCC-TTCATGTGAAGTTTCATG-GCAAGAC---GACTCG-T---TTTCTA--T
* * * * * ** * ** *
16238597 GGGTTTAGGCAC-A-TCTTCATA-TTTTGACCATGCCAATGCCATTTTTCT-G
844 ---TTT--TCACGATTTTTGAAACTTTTTACGGT-TC---GGGATTTTT-TAA
** * *** ** * * ** *
16238646 GCTTGTTAATTCATACAATCGTCCCTTAAGCCTTCATGTGAAGTT--TCATGACAAGA-CGACTC
1 AATT-TT--TTCAGA-AGGAGT---TTTGGCC-CCA----AACTTGGT-A-GACGTGATC--CTT
** **** * ** ***** * * * * ** * *
16238708 GT-TTTCTAT-TTTTCATG-ATTTTTGAAACTT--TTTACGGTTTGGGATTTTTTAAAATTTTTT
50 GTATTT-T-TGTTGGCATGCA--CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
** ** ** *** * ** * * ** * *
16238768 CAGATGGATTTTTGGTCCGAAACTTGGTAGACATGATCCTTATATTTTTGTTGG--ATTGCACAA
111 --GA-CCA--TTT-G--AAAAAAGT-GTCCCCAT--TTCAGACA-CTTTAATGGCTACTG-GC-A
** *** * * ** *** * * *
16238831 AAAAATCAACTAAAAACTCGAAATG-TATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA--
162 GCAAA-CCTGTAAAATCTC-AAATGCTCT----TTAAG-G-GGGTGTG-----AGT-TCTCGAGG
* * * * * * *** * ***
16238893 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTG
213 TTT--G--A---TGAGGGATA--GG-GGCCAA--TATAAGGGC-CAAGTAC-C----A---GCAC
** * * * * * * * ** ** ** * *
16238958 TGAGTTCTCGAGAT-TTGATGAGGTATAGGGGGCCAACTACTAGCACCTATCGCACATCATGTGC
257 CCA--TCGC-ACATCATG-TG-CGCACA----CCCCCCGGC-CCCCCCGATCG---------TG-
16239022 GCAAACCCCCCCAGCCCACCCCGATCGTCGGAATCCCAATGCCGCAGGTCAGGTTCTCCGACGAT
302 G--AA------C--CCCA-----A---T--G----CC---G-C-C-GGTCAGGTTCTCCGACGAT
* * * *
16239087 GGTGTCTCGACGAAGAAAAATGCGGCACTAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACC
337 GGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* ** * * * *
16239152 CTCGGCCCAATTCGCTCTTAGACTGGGAATGAACTCCGTATGCTTAGA-TAGGGAATGAACTTCA
402 CTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-GGGAATGAACTCCG
* *
16239216 TATCCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CAGCCAGAGGGGCGGGATGCGC
466 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * * * * *
16239280 AAGCCGGGGATCGGTCGGGTCCCCTTTTGCGTGCTGCCGATCCTGCTGTCC-CAACCCTCAGTCC
531 AAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT-ACCGCAACCCTCGGTCT
* * *
16239344 GGTCTGATCTTAGACTGGGAATGAACTTCATATGCCTAAGCCAACCGATGAAACGAGCGGTTG-G
595 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG--GCG
* * * *
16239408 GCCGGTGGGCACTACGTCAGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGCTAGG
658 GCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * * *
16239473 TGGGGTTTTGGCACATCTTCATATTTCTGCCATTCCAATGCCATTTTTATGGCTCGTAAATTCAT
723 T-GGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
* *
16239538 ACAATGGTCCCTTAAGCCTTCATGTTAAGTTTCATGGCAAGACGACTCGTTTTCTATTCTTCACG
787 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
*
16239603 ATTTTTGAAACCTTTTACGGTTCGGGATTTTTTAA
852 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
*
16239638 AATTTTTTCAGAAGGATTTTTGGCCCCAAA-TGTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
16239702 TGCACAAAAAAATTCAGCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
65 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * *
16239767 CCCCATTTTAGACACTTTAATTGCTACTGGCAGCAAACCTGGAAAATCTCAAATGCTCTTTAAGG
130 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
16239832 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCAGCC
195 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * *
16239897 ATCGTACATCATGTGCCCACACCCCCCGACCCCCCTGATCGTCGGTACCCCAATGCCGCCGGTCA
259 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGT-GGAACCCCAATGCCGCCGGTCA
* ** * *
16239962 GGTTCTCC-AGCGATGGTGCCCCGACGAAGAAAAATGTGACACC-GCATATGCCCGAGCCCAGCA
323 GGTTCTCCGA-CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * * *
16240025 TGTGCTGCCACAACCCTCGATCCGGTCTGATCTCAGACTGGGAATGAACTCCGTATGCTTAGACT
387 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
** *
16240090 GGGAATGAACTCCGTATGCCTAAGTCAAAACACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGA
452 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * *
16240155 GGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
517 GGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCG
* * ** * *
16240220 CGACTCTCAATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCGACGAA
582 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* *
16240285 ACGAGCGGGCGGACGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGTAAGCCGTGGATCGA
647 ACGAGCGGGCGG-CGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* * **** *
16240350 TATGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTCTATGGTGCCAATGCCATTTTTTTGGCT
711 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
* * * *
16240415 CGTAAATTCATACAATGGTCCCTTAGGCCTTCATGTGAAGTTTCATGGGAAGACGACTCTTTTTC
776 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
** **
16240480 TATTTTTCATAATTTTTGAAACTTTTTATAGTTCGGGATTTTTTAA
841 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * * * *
16240526 AATTTTTTCAGAAGGAGTTTTGGCCCTAAACTTGGGAGACCTAATCCTTGTATTTTTTTTGGCAT
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* *
16240591 GCATAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
66 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * *
16240656 CCAATTTTCAGACACTTTAATGGCTACTGGAAGCAAACCTATAAAATCTTAAATGCTCTTTAAGG
131 CCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * *
16240721 GGGTGTGAGTTCTTGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCCGCACCC
195 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCC
** * * * * * *
16240786 ATCATACATCATGTTCGCACACCCCCCCCCGACCCCCCCAATCGTCGGAACCCTAATGCCGTCGA
259 ATCGCACATCATGTGCGCACA---CCCCCCGGCCCCCCCGATCGT-GGAACCCCAATGCCGCCGG
* * *
16240851 TCAGGTTCTCCAACGATGGTGTCCCGACGAAGAAAAA-AGCAGCACCAGCACATGCTCGAGCCCA
320 TCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATA-CGGCACCAGCACATGCCCGAGCCCA
* * * **
16240915 GCATGTGCTGCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGAGAATGAACTTTGTATGCTTAG
384 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * *
16240980 ACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGACC
449 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * ** * * * *
16241045 AGACGGGCAGGATACGGAAATCGGGGATCGGTCGGGTCCCCCTCTGCTTGCTGCCTATCCTACTA
514 AGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTA
* * ** *
16241110 CCGCATCCTTCAAT-TCGGTCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAACCGA
579 CCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * * * *
16241174 CGAAACAAGCGAGCGGACGGGTGGGTGGGCACTACGCCAGCAAGAGAGG-TGGATGCGCAAGCCG
643 CG--A-AA-CGAGCGGGC-GGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * *
16241238 TGGATGGATAGTGTGGTAGATGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTT
703 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16241303 TTCTGGCATG-AGAATTCATACAATGGTCCATTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
768 TTCTGGCTTGTA-AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
16241367 CTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCGAGATTTTTTAA
832 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * *
16241422 AATTTTTTCA-ATAAGAGTTTTGGCCCCAACCTTGGTAGATGTGATCCTTGTATTTTTGTTGGCA
1 AATTTTTTCAGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
*
16241486 TGCACAAAAAAATTTC-GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATG
65 TGCACAAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
16241550 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
129 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * * *
16241615 GGGGTGTGAGTTCTCAAGGTTTGATGAGGAACAAGGGGCCAATATAAGGGCCAAGTACCAGCAGC
194 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGA-TAGGGGCCAATATAAGGGCCAAGTACCAGCACC
*
16241680 CATCGCACAT-ATGTGCGCACACCCCCC-G-------G--C------CCCC-ATGCCGCCAGTCA
258 CATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTGGAACCCCAATGCCGCCGGTCA
**
16241727 GGTTCTCC-AGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGGACAGCA
323 GGTTCTCCGA-CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * * * *
16241791 TGTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTGGACTTGGAATGAACTCCGTATGCTTAGAAT
387 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* *
16241856 GGAAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGA
452 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * * * * * *
16241921 GTGACGGGATGCGCAAGTCGGGGATCAGCCAGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCTT
517 GGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAC-C
* * * *
16241986 G--ACCCTTC-ATCTAGTCTGAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACG
581 GCAACCC-TCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* *
16242048 AAACGA-------GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCG
645 AAACGAGCGGGCGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *** * * * *
16242106 ATAGGATGGTAGGTATTTTTAGGCACATCTTCATATTTTTACCATGCCAAAGCCATTTTTATGGC
710 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* *
16242171 TTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTT
775 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
16242236 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
840 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* * *
16242283 AATTTTTTTAGAAGGA-TTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTCGACA
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCA
* * *
16242346 TGCCCAAAAAAATTAAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGT
65 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * *
16242411 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAGAATCTCAAATTCTTTTTAAGG
130 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
16242476 GGGTGTGAGTTTTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCAAGAACCAGCACCC
195 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG-CCAATATAAGGGCCAAGTACCAGCACCC
* * *
16242541 ATCGCACGTCCTGTGCGCACACCCCTCCCGGCCCCCGCCGATCGTCAGAACCCCAATGCCGCCGG
259 ATCGCACATCATGTGCGCACA-CCC-CCCGGCCCCC-CCGATCGT-GGAACCCCAATGCCGCCGG
* * * * * * *
16242606 TCAAGTTCTCGGGCGATGGTGTCCCGGCGAAGAAAAATACGGCACC-GATATATGCCCAAGCCCA
320 TCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAG-CACATGCCCGAGCCCA
* * *
16242670 ACATGTGCTGCTGTAA-CC-C--T-C-G---G----T---CT--G---G---TCCG-AT-CTTAG
384 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * *
16242709 ACTGGGAATGAACTCCGTATGCCTCAGTCAACCCACGAAATGAGCGTGCGGGCGTTCAGTCGGCC
449 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * * * *
16242774 AAAGGGGCGGGATGCGCAAG-CTAGGGATCAGCCGGGTCCCCCTCTTCGTGCTGCCAATCCTGGT
514 AGAGGGGCGGGATGCGCAAGCCGA-GGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
* * * * **
16242838 ACCGTAACCCTCAGT-TCGATCTGATCTTAGATTGGGAATGAACTTTGTATGCCTAA-CTCAACC
578 ACCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC-CAACC
* * * * * * * * *
16242901 GACGGAACGAGC--G-GGCGGGCGGGCACTACGCCAGTCAGAGAGACGAGATGCACAAGTCGTAG
641 GACGAAACGAGCGGGCGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
* * *
16242963 ATCGATAGGGTGCTAGGTGGGTTTAGGCACAACTTCATATTTCTGCCATACCAATGCCATTTTTC
706 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
* * * * * *
16243028 TGGCTTGTAAATTCATACAGTGGTCCCATAAGCCTTCATGCGAAGTTTCATGGCAAGACGGCACA
771 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * *
16243093 TTTTCTATTTTTCATGA-TTTTCAAACATTTTTATGGTTCGGGATTTTTCAA
836 TTTTCTATTTTTCACGATTTTTGAAAC-TTTTTACGGTTCGGGATTTTTTAA
* * *
16243144 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCGTTGTTTTTTTGTTGGCAT
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* *
16243209 GCAAAAAAAAATTCAGCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
66 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
16243274 CCCATTTCAGACACTTTAATGGCTACTAGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
131 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * * *
16243339 GGTTTGAGTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACTAGCACCCA
196 GGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* *
16243404 TCCCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTTGGAACCCCAATGCCGCTGGTCAG
260 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCG-TGGAACCCCAATGCCGCCGGTCAG
* * * *
16243469 GTTCTCCGACGATGATGTCCCGAAGAAGAAAAATACGGCACTAGCACATGCCCGAGCCTAGCATG
324 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* *
16243534 TGCTGTCGCAA-CC-C--T-C-G---G----T---C------TG-A-TCCG-AT-CTTAGATTGG
389 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
16243573 GAATGAACTCCGTATACCTAAGTCAACCCATGAAACGAGTGTGGGGGCACTCAGCCGGCCAGAGG
454 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * ** * * * *
16243638 GGC-GAATGCGTAAGCCGAGGTTTGACCGGGTCCCCCTCTGCATGCTGCCGATCCTGTTGCTGCA
519 GGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCA
* *
16243702 ACCCTCGGTCCGGTCTGATCTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
584 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * *
16243767 AAAC--G-GGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGGTGCGCAAGTCGTGGATCGATAG
649 GAGCGGGCGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
*
16243829 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGT
714 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
* * **
16243894 AAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACAAGTTTTCTAT
779 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
*
16243959 TTTTCACGATTTTTGAAACTTTTTAGGGTTCGGGATTTTTTAA
844 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
*
16244002 TATTTTTTCAGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
1 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * * *
16244066 GTACAAAAAAATTCAGCTAAAAACTCGTAGTGCACAAGATTTTGTGATCATTTGAAAAAAGTGTC
66 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * * *
16244131 CCCATTCCAGACACTTTAGTGGCTACTGGCAGCAAACTTGTAAAATCTCAAATTCTCTTAAAGGG
131 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
16244196 GGTGTGAGTTCTTGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
196 GGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * * * *
16244261 TCGCGCGTCCTGTGCGCACACCCCTCGGCCCCCCCAATCGCCGGAACCCCAATGCCGCCGGTAAT
260 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCG-TGGAACCCCAATGCCGCCGGTCAG
* * * * **
16244326 GTTCTCCGGCGACGGTGTCCCGACGAAGAAAAATATGGCACCAGCACAAGCTTGAGCCCAGCATG
324 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * * *
16244391 TGTTACTGCAATGCC-CGGTCTGGTTCGATCTTAGACTGGGAGTGAACTCCGTATGC
389 TGCTGCCGCAA-CCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
16244447 CTAAGCCAAC
Statistics
Matches: 10134, Mismatches: 1485, Indels: 881
0.81 0.12 0.07
Matches are distributed among these distances:
855 2 0.00
856 120 0.01
857 383 0.04
858 325 0.03
859 192 0.02
860 266 0.03
861 410 0.04
862 420 0.04
863 589 0.06
864 13 0.00
865 2 0.00
866 4 0.00
867 1 0.00
868 4 0.00
869 3 0.00
870 2 0.00
871 1 0.00
872 52 0.01
873 238 0.02
874 6 0.00
875 1 0.00
876 2 0.00
877 137 0.01
878 335 0.03
879 296 0.03
880 8 0.00
881 12 0.00
882 76 0.01
883 3 0.00
884 1 0.00
885 2 0.00
886 2 0.00
887 16 0.00
888 990 0.10
889 1048 0.10
890 683 0.07
891 134 0.01
892 582 0.06
893 519 0.05
894 14 0.00
895 127 0.01
896 348 0.03
897 451 0.04
898 7 0.00
899 70 0.01
900 244 0.02
901 3 0.00
903 1 0.00
904 1 0.00
905 1 0.00
907 1 0.00
908 5 0.00
909 6 0.00
910 44 0.00
911 6 0.00
917 5 0.00
918 2 0.00
919 6 0.00
920 3 0.00
922 2 0.00
923 1 0.00
924 1 0.00
925 1 0.00
927 5 0.00
928 14 0.00
929 6 0.00
930 8 0.00
931 19 0.00
932 9 0.00
933 2 0.00
934 8 0.00
935 7 0.00
937 3 0.00
938 4 0.00
940 2 0.00
942 7 0.00
943 9 0.00
944 2 0.00
945 8 0.00
946 14 0.00
947 3 0.00
948 6 0.00
949 5 0.00
950 8 0.00
953 6 0.00
954 2 0.00
955 5 0.00
956 4 0.00
957 5 0.00
958 26 0.00
959 11 0.00
960 8 0.00
961 4 0.00
962 1 0.00
963 6 0.00
964 1 0.00
966 9 0.00
967 15 0.00
968 12 0.00
969 10 0.00
970 11 0.00
971 18 0.00
972 9 0.00
974 1 0.00
975 6 0.00
977 4 0.00
978 8 0.00
979 12 0.00
980 27 0.00
981 5 0.00
982 4 0.00
983 5 0.00
984 2 0.00
985 6 0.00
988 7 0.00
989 7 0.00
990 4 0.00
991 3 0.00
992 14 0.00
993 9 0.00
994 2 0.00
995 8 0.00
996 6 0.00
998 2 0.00
1000 3 0.00
1001 2 0.00
1003 8 0.00
1004 8 0.00
1005 3 0.00
1006 9 0.00
1007 12 0.00
1008 12 0.00
1009 5 0.00
1010 10 0.00
1011 2 0.00
1012 5 0.00
1013 4 0.00
1015 1 0.00
1016 2 0.00
1017 2 0.00
1018 2 0.00
1019 4 0.00
1020 2 0.00
1021 4 0.00
1022 4 0.00
1023 1 0.00
1024 692 0.07
1025 172 0.02
1026 89 0.01
1027 63 0.01
1028 160 0.02
1029 158 0.02
1030 49 0.00
1031 251 0.02
1032 71 0.01
1033 76 0.01
1034 34 0.00
1035 70 0.01
1036 52 0.01
1037 54 0.01
1038 39 0.00
1039 59 0.01
1040 88 0.01
1041 56 0.01
1042 78 0.01
1043 37 0.00
1044 61 0.01
1045 53 0.01
1046 82 0.01
1047 321 0.03
1048 418 0.04
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (886 bp):
AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTGGAACCCCAATGCCGCCGGTCAGGT
TCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
CGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAAC
CCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
GCGGGCGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
Found at i:16233727 original size:26 final size:26
Alignment explanation
Indices: 16233688--16233740 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16233678 CCGATCCAAT
*
16233688 CTTAGACTCAGAATGAACTCTGTATG
1 CTTAGACTCAGAATGAACTCCGTATG
**
16233714 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTCAGAATGAACTCCGTATG
16233740 C
1 C
16233741 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTCAGAATGAACTCCGTATG
Found at i:16234613 original size:26 final size:26
Alignment explanation
Indices: 16234577--16234629 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16234567 CCAGTCTGAT
16234577 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16234603 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16234629 C
1 C
16234630 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16235513 original size:26 final size:26
Alignment explanation
Indices: 16235477--16235529 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16235467 TCAGTCTGAT
* *
16235477 CTTAGTCTGGGAATCAACTTCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
16235503 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16235529 C
1 C
16235530 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.21, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:16237279 original size:26 final size:26
Alignment explanation
Indices: 16237228--16237280 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16237218 CCGGTCCAAT
* *
16237228 CTTATACTGAGAATGAACTTCATATG
1 CTTAGACTGAGAATGAACTCCATATG
* *
16237254 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCATATG
16237280 C
1 C
16237281 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCATATG
Found at i:16238150 original size:26 final size:26
Alignment explanation
Indices: 16238121--16238170 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
16238111 CCGGTCCGAT
*
16238121 CTTAGATTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
* *
16238147 CTTAGGCTGGGAATGAACTCCGTA
1 CTTAGACTGGCAATGAACTCCGTA
16238171 CGCCTAAGTC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.26, C:0.20, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:16238334 original size:26 final size:26
Alignment explanation
Indices: 16238305--16238357 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16238295 CCGGTCCGAT
*
16238305 CTTAGTCCGGGAATGAACTCCGTATG
1 CTTAGACCGGGAATGAACTCCGTATG
* *
16238331 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACCGGGAATGAACTCCGTATG
16238357 C
1 C
16238358 CTATGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACCGGGAATGAACTCCGTATG
Found at i:16238453 original size:184 final size:184
Alignment explanation
Indices: 16238092--16238505 Score: 490
Period size: 184 Copynumber: 2.2 Consensus size: 184
16238082 GCCCAGCATG
* * * *
16238092 TGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGATTGGCAATGAACTCCGTATGCTTAGGCTGG
1 TGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGATCGGCAATGAACTCCGTATGCTTAGACTGG
* ** *
16238157 GAATGAACTCCGTACGCCTAAGTCAACCCATGAAACGAGCGTGCGGGGGCTCAGTCGGCCAGAGG
66 GAATGAACTCCGTACGCCTAAGTCAACCCATGAAACGAGCGTACGGGCACTCAATCGGCCAGAGG
* * ** * * *
16238222 GGCGGGATGCGCATGCCAGGATTGGTCGGGTCCCTCTTTGCGTGCTGCCAATCC
131 GGCGGGACGCGCAAGCCAGGATCAGCCAGGTCCCTCTCTGCGTGCTGCCAATCC
* *
16238276 TGCTGCCGTAACCCTCGATCCGGTCCGATCTTAG-TCCGGGAATGAACTCCGTATGCTTAGACTG
1 TGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGAT-CGGCAATGAACTCCGTATGCTTAGACTG
* * *
16238340 GGAATGAACTTCGTATGCCTATGTCAACCCATGAAACGAGCGTACGGGCACTCAATCGGCCAGAG
65 GGAATGAACTCCGTACGCCTAAGTCAACCCATGAAACGAGCGTACGGGCACTCAATCGGCCAGAG
* * * * * *
16238405 GGGCGTGACGCGTAAGCCGGGGATCAGCCAGGTCCC-CTCTGTGTGCTGCCGATCT
130 GGGCGGGACGCGCAAGCC-AGGATCAGCCAGGTCCCTCTCTGCGTGCTGCCAATCC
** * * * * * *
16238460 TGCTGCTACAACCCTTGGTCCTGTCTGATCTTAGATTGGGAATGAA
1 TGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGATCGGCAATGAA
16238506 GCCAACCGAC
Statistics
Matches: 193, Mismatches: 34, Indels: 6
0.83 0.15 0.03
Matches are distributed among these distances:
183 1 0.01
184 179 0.93
185 13 0.07
ACGTcount: A:0.20, C:0.28, G:0.29, T:0.23
Consensus pattern (184 bp):
TGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGATCGGCAATGAACTCCGTATGCTTAGACTGG
GAATGAACTCCGTACGCCTAAGTCAACCCATGAAACGAGCGTACGGGCACTCAATCGGCCAGAGG
GGCGGGACGCGCAAGCCAGGATCAGCCAGGTCCCTCTCTGCGTGCTGCCAATCC
Found at i:16240088 original size:26 final size:26
Alignment explanation
Indices: 16240059--16240108 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
16240049 GTCTGATCTC
16240059 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
16240085 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
16240109 CTAAGTCAAA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.20, G:0.28, T:0.24
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:16240420 original size:888 final size:884
Alignment explanation
Indices: 16238276--16244446 Score: 7541
Period size: 861 Copynumber: 7.1 Consensus size: 884
16238266 CTGCCAATCC
* * * * *
16238276 TGCTGCCGTAACCCTCGATCCGGTCCGATCTTAGTCCGGGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * **
16238341 GAATGAACTTCGTATGCCTATGTCAACCCATGAAACGAGCGTACGGGCACTCAATCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * **
16238406 GGCGTGACGCGTAAGCCGGGGATCAGCCAGGT-CCCCTCTGTGTGCTGCCGATCTTGCTGCTACA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
** * * *
16238470 ACCCTTGGTCCTGTCTGATCTTAGA-TTGG---G-A------ATG---AAGCCAACCGACGAAAA
196 ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* *
16238521 GAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
261 GAGC--G-GGGCGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
16238586 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TGACCATGCCAATGCCATTTTTCTGGCTT
323 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-ACCATGCCAATGCCATTTTTCTGGCTT
* * *
16238650 GTTAATTCATACAATCGTCCCTTAAGCCTTCATGTGAAGTTTCATGACAAGACGACTCGTTTTCT
387 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * *
16238715 ATTTTTCATGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGATGGATTTT
452 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * * * *
16238780 TGGTCCGAAACTTGGTAGACATGATCCTTATATTTTTGTTGG-ATTGCACAAAAAAA-TCAACTA
517 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTCAGCTA
* *
16238843 AAAACTCGAAATGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
581 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
16238908 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTCGAGATT
646 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * * *
16238973 TGATGAGGTATA--GG---------GGGCCAACTACTAGCACCTATCGCACATCATGTGCGCAAA
711 TGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * *
16239027 CCCCCCCAGCCCACCCCGATCGTCGGAATCCCAATGCCGCAGGTCAGGTTCTCC-GACGATGGTG
776 CCCCCCGA-CCC-CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAG-CGATGGTG
* * * *
16239091 TCTCGACGAAGAAAAATGCGGCACTAGCACATGCTCGAGCCCAGCATG
838 TCCCGACGAAGAAAAATACGGCAC-CGCACATGCCCGAGCCCAGCATG
* ** *
16239139 TGCTGCCGCAACCCTCGGCCCAAT-TCGCTCTTAGACTGGGAATGAACTCCGTATGCTTAGA-TA
1 TGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-
* * * *
16239202 GGGAATGAACTTCATATCCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CAGCCAGA
64 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * *
16239266 GGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTTTTGCGTGCTGCCGATCCTGCTGTCC
129 GGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG-CC
* * *
16239331 -CAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTTCATATGCCTAAGCCAACCGATGA
193 GCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* *
16239395 AACGAGCGGTTGGGCCGGTGGGCACTACGTC-AGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
258 AACGAGC-G--GGGCGGGCGGGCACTACGTCGA-CCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* * * * *
16239459 GATAGGGTGCTAGGTGGGGTTTTGGCACATCTTCATATTTCTGCCATTCCAATGCCATTTTTATG
319 GATAGGGTGGTAGGT-GGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTG
* *
16239524 GCTCGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTTAAGTTTCATGGCAAGACGACTCGTT
383 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * *
16239589 TTCTATTCTTCACGATTTTTGAAACCTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGA
448 TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGA
*
16239654 TTTTTGGCCCCAAA-TGTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
513 GTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
16239718 GCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACT
577 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
16239783 TTAATTGCTACTGGCAGCAAACCTGGAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
642 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* *
16239848 GGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCAGCCATCGTACATCATGTGC
707 GGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * *
16239913 CCACACCCCCCGACCCCCCTGATCGTCGGTACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGG
771 GCACACCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGG
* ** * *
16239978 TGCCCCGACGAAGAAAAATGTGACACCGCATATGCCCGAGCCCAGCATG
836 TGTCCCGACGAAGAAAAATACGGCACCGCACATGCCCGAGCCCAGCATG
* * *
16240027 TGCTGCCACAACCCTCGATCCGGTCTGATCTCAGACTGGGAATGAACTCCGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
** *
16240092 GAATGAACTCCGTATGCCTAAGTCAAAACACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* *
16240157 GGCGGGATGCGCAAGTCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCG
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * *
16240222 ACTCTCAATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAACCGACGAAAC
196 ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
*
16240287 GAGCGGGCGGACGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGTAAGCCGTGGATCGATA
261 GAGC-GG-GG-CGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* * *** * *
16240352 TGGTGGTAGGTGGGTTTAGGCACATCCTCATATTTCTATGGTGCCAATGCCATTTTTTTGGCTCG
323 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTG
* * *
16240417 TAAATTCATACAATGGTCCCTTAGGCCTTCATGTGAAGTTTCATGGGAAGACGACTCTTTTTCTA
388 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* **
16240482 TTTTTCATAATTTTTGAAACTTTTTATAGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
453 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * * * * * *
16240547 GGCCCTAAACTTGGGAGACCTAATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTTAGCTAAA
518 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
16240612 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTTCAGACACTTTAAT
583 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAAT
* * * *
16240677 GGCTACTGGAAGCAAACCTATAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
647 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * ** *
16240742 GATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCCGCACCCATCATACATCATGTTCGCACA
712 GATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * *
16240807 CCCCCCCCCGACCCCCCCAATCGTCGGAACCCTAATGCCGTCGATCAGGTTCTCCAACGATGGTG
776 ---CCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGGTG
* *
16240872 TCCCGACGAAGAAAAA-AGCAGCACCAGCACATGCTCGAGCCCAGCATG
838 TCCCGACGAAGAAAAATA-CGGCACC-GCACATGCCCGAGCCCAGCATG
* * **
16240920 TGCTGCAGCAACCCTCGGTCCGGTCTGATCTTAGACTGAGAATGAACTTTGTATGCTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
16240985 GAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGACCAGACG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * ** * * * * *
16241050 GGCAGGATACGGAAATCGGGGATCGGTCGGGTCCCCCTCTGCTTGCTGCCTATCCTACTACCGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * *
16241115 TCCTTCAATTCGGTCTGATCTTAGACTGGGAATAAACTCCGTATGCCTAAGCCAACCGACGAAAC
196 ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A-
* * * * *
16241180 AAGCGAGCGGACGGGTGGGTGGGCACTACG-CCAGCAAGAGAGG-TGGATGCGCAAGCCGTGGAT
258 AA-CGAGC-G--GGGCGGGCGGGCACTACGTCGA-CCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* * * * *
16241243 GGATAGTGTGGTAGATGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTG
318 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTG
* * *
16241308 GCATG-AGAATTCATACAATGGTCCATTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCAT
383 GCTTGTA-AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
* * *
16241372 TTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCGAGATTTTTTAAAATTTTTTCA-ATAA
447 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA-AG
* *
16241436 GAGTTTTGGCCCCAACCTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTT
511 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA-TT
*
16241501 C-GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACA
575 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
16241565 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
640 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * *
16241630 AAGGTTTGATGAGGAACAAGGGGCCAATATAAGGGCCAAGTACCAGCAGCCATCGCACAT-ATGT
705 GAGGTTTGATGAGGGA-TAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
*
16241694 GCG--CA-----C-A-CCCCCCG---G-C----CCCC-ATGCCGCCAGTCAGGTTCTCCAGCGAT
769 GCGCACACCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGAT
**
16241741 GGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGGACAGCATG
834 GGTGTCCCGACGAAGAAAAATACGGCACC-GCACATGCCCGAGCCCAGCATG
* * * *
16241793 TGCTGCCGCAACCCTCGGTCCAGTCTGATCTTGGACTTGGAATGAACTCCGTATGCTTAGAATGG
1 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
16241858 AAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGT
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
16241923 GACGGGATGCGCAAGTCGGGGATCAGCCAGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCTTG-
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC-CGC
** * *
16241987 -ACCCTTCA-TCTAGTCTGAACTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAA
195 AACCC-TCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * *
16242050 ACGA-----GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAG
259 ACGAGCGGGGCGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* *** * * * *
16242110 GATGGTAGGTATTTTTAGGCACATCTTCATATTTTTACCATGCCAAAGCCATTTTTATGGCTTTT
324 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGT
*
16242175 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTAT
389 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
16242240 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGA-TTTTT
454 TTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* * *
16242304 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTCGACATGCCCAAAAAAATTAAGCTAAA
519 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAA
*
16242368 AACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
583 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * * *
16242433 GCTACTGGCAGCAAACCTGTAGAATCTCAAATTCTTTTTAAGGGGGTGTGAGTTTTCGAGGTTTG
648 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * *
16242498 ATGAGGGATAGGGGACCAATATAAGGGCCAAGAACCAGCACCCATCGCACGTCCTGTGCGCACAC
713 ATGAGGGATAGGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
* * * **
16242563 CCCTCCCGGCCCCCGCCGATCGTCAGAACCCCAATGCCGCCGGTCAAGTTCTCGGGCGATGGTGT
776 CCC-CCCGACCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGGTGT
* * * * *
16242628 CCCGGCGAAGAAAAATACGGCACCGATATATGCCCAAGCCCAACATG
839 CCCGACGAAGAAAAATACGGCACCG-CACATGCCCGAGCCCAGCATG
* *
16242675 TGCTGCTGTAA-CC-C--T-C-G---G----T---CT--G---G---TCCG-AT-CTTAGACTGG
1 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
16242714 GAATGAACTCCGTATGCCTCAGTCAACCCACGAAATGAGCGTGCGGGCGTTCAGTCGGCCAAAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
** * * * * * *
16242779 GGCGGGATGCGCAAGCTAGGGATCAGCCGGGTCCCCCTCTTCGTGCTGCCAATCCTGGTACCGTA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * ** *
16242844 ACCCTCAGTTCGATCTGATCTTAGATTGGGAATGAACTTTGTATGCCTAA-CTCAACCGACGGAA
196 ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC-CAACCGACGAAA
* * * * * * *
16242908 CGAGC-GGGCGGGCGGGCACTACG-CCAGTCAGAGAGACGAGATGCACAAGTCGTAGATCGATAG
260 CGAGCGGGGCGGGCGGGCACTACGTCGA-CCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* * * *
16242971 GGTGCTAGGTGGGTTTAGGCACAACTTCATATTTCTGCCATACCAATGCCATTTTTCTGGCTTGT
324 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGT
* * * * * *
16243036 AAATTCATACAGTGGTCCCATAAGCCTTCATGCGAAGTTTCATGGCAAGACGGCACATTTTCTAT
389 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
16243101 TTTTCATGA-TTTTCAAACATTTTTATGGTTCGGGATTTTTCAAAATTTTTTCAGAAGGAGTTTT
454 TTTTCATGATTTTTGAAAC-TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTT
* * * *
16243165 GGCCCCAAACTTGGTAGAAGTGATCGTTGTTTTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAA
518 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
16243230 ACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
583 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * * *
16243295 GCTACTAGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTTTGAGTTTTCGAGGTTTG
648 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * *
16243360 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGAACTAGCACCCATCCCACATCATGTGCGCACAC
713 ATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
* * * *
16243425 CCCCCGGCCCCCCCGATCGTTGGAACCCCAATGCCGCTGGTCAGGTTCTCC-GACGATGATGTCC
777 CCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAG-CGATGGTGTCC
* * *
16243489 CGAAGAAGAAAAATACGGCACTAGCACATGCCCGAGCCTAGCATG
841 CGACGAAGAAAAATACGGCAC-CGCACATGCCCGAGCCCAGCATG
* *
16243534 TGCTGTCGCAA-CC-C--T-C-G---G----T---C------TG-A-TCCG-AT-CTTAGATTGG
1 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
16243573 GAATGAACTCCGTATACCTAAGTCAACCCATGAAACGAGTGTGGGGGCACTCAGCCGGCCAGAGG
66 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * * *
16243638 GGC-GAATGCGTAAGCCGAGGTTTGACCGGGTCCCCCTCTGCATGCTGCCGATCCTGTTGCTGCA
131 GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* *
16243702 ACCCTCGGTCCGGTCTGATCTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
196 ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * *
16243767 AAAC-GGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGGTGCGCAAGTCGTGGATCGATAGGG
261 GAGCGGGGCGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
* *
16243831 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGTAA
326 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAA
* * **
16243896 ATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACAAGTTTTCTATTT
391 ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * *
16243961 TTCACGATTTTTGAAACTTTTTAGGGTTCGGGATTTTTTAATATTTTTTCAGAAGGAGTTTTGG-
456 TTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
*
16244025 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTACAAAAAAATTCAGCTAAAAAC
521 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* * * * *
16244090 TCGTAGTGCACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAGTGGCT
586 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * * *
16244155 ACTGGCAGCAAACTTGTAAAATCTCAAATTCTCTTAAAGGGGGTGTGAGTTCTTGAGGTTTGATG
651 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * *
16244220 AGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCGCGTCCTGTGCGCACACCCC
716 AGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * * * * * * *
16244285 TCGGCCCCCCCAATCGCCGGAACCCCAATGCCGCCGGTAATGTTCTCCGGCGACGGTGTCCCGAC
780 CCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGGTGTCCCGAC
* * **
16244350 GAAGAAAAATATGGCACCAGCACAAGCTTGAGCCCAGCATG
845 GAAGAAAAATACGGCACC-GCACATGCCCGAGCCCAGCATG
* * * * * *
16244391 TGTTACTGCAATGCC-CGGTCTGGT-TCGATCTTAGACTGGGAGTGAACTCCGTATGC
1 TGCTGCCGCAA-CCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGC
16244447 CTAAGCCAAC
Statistics
Matches: 4594, Mismatches: 569, Indels: 270
0.85 0.10 0.05
Matches are distributed among these distances:
855 1 0.00
856 121 0.03
857 381 0.08
858 327 0.07
859 191 0.04
860 263 0.06
861 402 0.09
862 273 0.06
863 156 0.03
864 5 0.00
866 3 0.00
867 1 0.00
868 4 0.00
869 3 0.00
870 3 0.00
872 53 0.01
873 240 0.05
874 8 0.00
876 4 0.00
877 84 0.02
878 217 0.05
879 144 0.03
880 2 0.00
881 11 0.00
882 85 0.02
883 2 0.00
884 1 0.00
887 1 0.00
888 394 0.09
889 387 0.08
890 7 0.00
891 40 0.01
892 76 0.02
893 246 0.05
894 6 0.00
895 123 0.03
896 296 0.06
897 30 0.01
898 2 0.00
899 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (884 bp):
TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
GAGCGGGGCGGGCGGGCACTACGTCGACCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAA
ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
AGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
CGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGGTGTCCCGACG
AAGAAAAATACGGCACCGCACATGCCCGAGCCCAGCATG
Found at i:16240988 original size:26 final size:26
Alignment explanation
Indices: 16240949--16241001 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16240939 CCGGTCTGAT
*
16240949 CTTAGACTGAGAATGAACTTTGTATG
1 CTTAGACTGAGAATGAACTTCGTATG
*
16240975 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGAGAATGAACTTCGTATG
16241001 C
1 C
16241002 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTTCGTATG
Found at i:16246474 original size:26 final size:26
Alignment explanation
Indices: 16246436--16246488 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16246426 CCAGTCTAAT
* *
16246436 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
16246462 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
16246488 C
1 C
16246489 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:16246929 original size:889 final size:884
Alignment explanation
Indices: 16245084--16249082 Score: 4983
Period size: 863 Copynumber: 4.6 Consensus size: 884
16245074 CCAGCAACGG
* * ** * * * *
16245084 GTTTCCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTTGGATTTTTTTAAATTTCTACAAAA
1 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* * * * *
16245149 GCAATTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCAAAAAAAAATT
66 GGAGTTTTGGCCCCAAACTTGG-AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
16245214 CAGCTAAAACCTCGAAATGTACAAGATTTTTTGACCATTTGAAAAAGGTGTCCCCATTTCAGACA
130 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
16245279 CTTTAATGGGTACTGGTAGCAAACCTGTAAAAACTCAAATGCTCTTTAAAGGGGTGTGAGTTCTC
195 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
** * * * *
16245344 GAATTTTGATGA-GGATAGGGGGCCAATATAAGGTCTAACTACCAGCACCCATCGTACATCATGT
260 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * *
16245408 GCGAACACCTCCCCC-G-------ATCATCGAAACCCCAATGCCGACGATCAGGTTCTCCGACGA
325 GCGCACACC-CCCCCGGCCCCCCCATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
** * * * * * *
16245465 TCATGTCCCGATGAAAAAAAATACGGCACCAGCACAAGCCCGAGCCCAGTATGTGCTGTCGTAAC
389 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * * *
16245530 CCTCGGCCCGGTCCGATCTTAAACTGGGAATTAACTCCGTATGCTTCGACTGGGAATGAACTCCG
454 CCTCGGTCCAGT---ATCTT-AACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * * * * *
16245595 TATGCCTAAGTCAACCCATGAAACTAGCGTGCGGGTGGTCAGTCGGCCAGATGGGTGGGATGCGC
515 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * * **
16245660 AAGCTGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTACTGCCACAACCCTCTGTCCG
580 AAGCTGGGGATCGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCACAACCCTCAATCCG
* * * *
16245725 CTCCGATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGT
645 ATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
*
16245790 GGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
710 GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * * *
16245855 GGCTTAGGAACATCTTCATATTTTTGCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
775 GGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
16245920 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
840 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * *
16245965 GTTTTCTATTTTTCTCGATTTTTGAAACTTTTTACGATTCAGGATTTTATAAATTTTTTTCAGAA
1 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* *
16246030 GGAGTTTTGGCCCCAAACATGG-CACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
66 GGAGTTTTGGCCCCAAACTTGGAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
16246094 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGAGTCCCCATTTCAGACAC
131 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
*
16246159 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTCG
196 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
16246224 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
261 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * *
16246289 CGCACACCCCCCCGGCCACCCCCAATCGTCGGAACCCCAATACCGTCGGTCAGGTTCTCCGGCGA
326 CGCACACCCCCCCGGCC-CCCCC-ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
***
16246354 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGGATAGCATGTGCTGCCGCAAC
389 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* *
16246419 CCTCGGTCCAGTCTAATCTTAGACTTGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCG
454 CCTCGGTCCAG--T-ATCTTA-ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * *
16246484 TATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATACGC
515 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * *
16246549 AAG-TCGGGGATCAGCT-GGGTCCCCTTCTGTGTGCTGCCGATCCTTCTGCC-CGACCCTTC-AT
580 AAGCT-GGGGATC-GCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCACAACCC-TCAAT
*
16246610 CC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGC
642 CCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
*
16246674 GGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTA
706 GGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*** * *
16246739 GGTATTTTTAGGCACATCTTCATATTTTTACCATGCCAAAGCCATTTTTCTGGCTTGTAAATTCA
771 GGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
16246804 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
836 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
*
16246853 GTTTTGCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGA
1 GTTTT-CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
* * * *
16246918 AGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTCTATTTTTGTCGGCATGCACAAAAAAAT
65 AGGAGTTTTGGCCCCAAACTTGG-AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
16246983 TAAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
129 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * *
16247048 ACTTTAATAGCTACTGCCAGCAAACCTGTAAAATCTCAAATTCTTTTTAAGGGGGTGTGAGTTCT
194 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
16247113 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACCCATCGCACGTCCTG
259 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
16247178 TGCGCACACCCCTCCCGGCCCCCGCCGATCGTCAGAATCCCAATGCCGCCGGTCAGGTTCTCCGG
324 TGCGCACACCCC-CCCGGCCCCC-CC-ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* * *
16247243 CGATGGTGTCCC-AGCGAAGAAAAATACGGCACCAACACATGCCCAAGCCCAGCATGTGCTGCTG
386 CGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
16247307 CAA-CC-C--T-CAG-----T--CT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCG
450 CAACCCTCGGTCCAGTATCTTAACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * ** *
16247350 TATGCCTCAGTCAACTCACGAAATGAGCGTGCGGGCATTCAGCCAGCCAGAGGGGCGGGATGCGC
515 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * * ** **
16247415 AAGCTAGGGATCAGC-CGGGTCCCCCTCTTCGTGCTGCCAATCCTGGTGCCGTAACCCTCAATCC
580 AAGCTGGGGATC-GCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCACAACCCTCAATCC
* * * *
16247479 GAT-CGAATCTTACATTGGGAATGAACTCCGTATGCCTAAGTCAACCGACGGAACGA----GCGG
644 GATCCG-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * **
16247539 GTGGGCGGGCATTACGCCGATCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
708 GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * *
16247604 TGGGTTTAGGCACATCTTCATATTTCTGCCATAACCGATGCCATTTTTCTGGCTTGTAAATTCAT
773 TGGGTTTAGGCACATCTTCATATTTCTACCAT-GCCAATGCCATTTTTCTGGCTTGTAAATTCAT
*
16247669 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTC
837 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * * *
16247717 GTTTTCTAGTTTTCATGA-TTTTCAAACATTTTTATGGTTCGGGATTTGTCAAAATTTTTTCAGA
1 GTTTTCTATTTTTCACGATTTTTGAAAC-TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
* * * *
16247781 AGGAGTTTTGGCCCCAAACTTGGTAGAAGTGATCATTGTTTTTTTGTTGGCATGCAAAAAAAAAT
65 AGGAGTTTTGGCCCCAAACTTGG-AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
16247846 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
129 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
16247911 ACTTTAATGGCTACTAGCAGTAAACCTGTAAAATGTCAAATGCTCTTTAAGGGGGCT-TGAGTTC
194 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG-TGTGAGTTC
16247975 TCGAGGTTTGATGAGGGATATGGGGCCAATATAGGGGCCAATATAAGGGCCAAGTACCAGCACCC
258 TCGAGGTTTGATGAGGGATA----G--------GGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * *
16248040 ATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCGATCGTCAGAACCACAATGCCGCTGGTC
311 ATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC-ATCGTCGGAACCCCAATGCCGCCGGTC
* * * *
16248105 AGGTTCTCCGACGATGATGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCTAGCA
375 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
*
16248170 TGTGCTGCCGCAACCCTC-G----G--TC----C---G-AT---CT--G-AT-CTTAGATTGGGA
440 TGTGCTGCCGCAACCCTCGGTCCAGTATCTTAACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * *
16248213 ATTAACTCCGTATGCCTAAGTCAACCCATGAAACGAGTGTGCGGGCGCTCAGCCGACCAGAGGGG
505 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * * * *
16248278 C-GAATGTGCAAGCCGGGGATCGGTCGGGTCCCCCGCTGCATGCTGCCGATCCTGT-TGCCGCAA
570 CGGGATGCGCAAGCTGGGGATCGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCT-TCTGCCACAA
** * * *
16248341 CCCTCGGTCCGGTCTGATCTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
634 CCCTCAATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A--
* *
16248406 AACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGGTGCGCAAGTCGTGGATCG
695 AACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
16248471 ATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTACCATGCCAATGCCATTTTTTTGGC
760 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGC
* * *
16248536 TTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACAC
825 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* *
16248596 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTAGGGTTCGGGATTTTTTAATATTTTTTCAGAA
1 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* * *
16248661 GGAGTTTTGG-CCCAAACTTGGTAGACATGATCCTTGTGTTTTTGTTGGCATGTACAAAAAAATT
66 GGAGTTTTGGCCCCAAACTTGG-AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * * *
16248725 CAGCTAAAACCTCGTAGTGCACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTCCAGACA
130 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * * *
16248790 CTTTAGTGGCTACTGGCAGCAAACCTATAAAATCTCAAATTCTCTTAAAGGGGGTGTGAGTTCTT
195 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * * * * * *
16248855 GAAGTTTAATGATGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCGCGTCCTGT
260 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
*
16248920 GCGCACA--CCCCC-G-------ATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
325 GCGCACACCCCCCCGGCCCCCCCATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * * * * * * **
16248975 GGTGTCCTGACGAAGAAAAATATGACACCAGCACAAGCTCGAGCCCAGCATGTGCTACTGCAATG
390 GGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
**
16249040 CTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGC
455 CTCGGTCCAG-T--ATCTTA-ACTGGGAATGAACTCCGTATGC
16249083 CTAAGCCAAC
Statistics
Matches: 2728, Mismatches: 297, Indels: 186
0.85 0.09 0.06
Matches are distributed among these distances:
855 95 0.03
856 1 0.00
860 1 0.00
862 8 0.00
863 329 0.12
864 87 0.03
865 2 0.00
866 170 0.06
867 58 0.02
868 5 0.00
870 1 0.00
871 2 0.00
872 98 0.04
873 169 0.06
874 16 0.01
875 56 0.02
876 7 0.00
877 3 0.00
878 178 0.07
879 309 0.11
880 160 0.06
881 72 0.03
887 3 0.00
888 241 0.09
889 313 0.11
890 3 0.00
891 239 0.09
892 102 0.04
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (884 bp):
GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
GGAGTTTTGGCCCCAAACTTGGAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
CGCACACCCCCCCGGCCCCCCCATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
GTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
TCGGTCCAGTATCTTAACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTG
GGGATCGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTTCTGCCACAACCCTCAATCCGATCCGA
TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGG
GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
GGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
Found at i:16248013 original size:12 final size:12
Alignment explanation
Indices: 16247992--16248027 Score: 56
Period size: 12 Copynumber: 3.1 Consensus size: 12
16247982 TTGATGAGGG
16247992 ATAT-GGGGCCA
1 ATATAGGGGCCA
16248003 ATATAGGGGCCA
1 ATATAGGGGCCA
*
16248015 ATATAAGGGCCA
1 ATATAGGGGCCA
16248027 A
1 A
16248028 GTACCAGCAC
Statistics
Matches: 23, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
11 4 0.17
12 19 0.83
ACGTcount: A:0.36, C:0.17, G:0.31, T:0.17
Consensus pattern (12 bp):
ATATAGGGGCCA
Found at i:16251111 original size:26 final size:26
Alignment explanation
Indices: 16251073--16251125 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16251063 CCGATCCGAT
*
16251073 CTTAGACTTGGAATGAACCCCGTATG
1 CTTAGACTAGGAATGAACCCCGTATG
* *
16251099 CTTAGTCTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACCCCGTATG
16251125 C
1 C
16251126 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACCCCGTATG
Found at i:16251497 original size:887 final size:887
Alignment explanation
Indices: 16249721--16251840 Score: 3041
Period size: 887 Copynumber: 2.4 Consensus size: 887
16249711 CCAGCAATGG
* *
16249721 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTC-AGATTGTTTT-TAATTTTTTCAG
1 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TTCGAGATT-TTTTAAAAATTTTTCAG
* * *
16249784 AAGCAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCAAAAAAAAA
64 AAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAA
* *
16249849 ATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAG
128 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16249914 ATACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
193 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTT
* * * * *
16249979 CTCGAAGTTTGATGA-GGATAGGGGGCCAATATAAGGTCCAACTACTAGCACCCATCGTACATCA
257 CTCGAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCA
* *
16250043 TGTGCGC--A--CACC--TCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACG
322 TGTGCGCAAACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACG
** * *
16250102 ATCGTGTCCCGATGAAAAAAAATACGGTACCAGCACAAGCCCGAGCCCACTATGTGCTATCGTAA
387 ATCGTGTCCCGATGAAAAAAAATACGACACCAGCACAAGCCCGAGCCCACTATATGCTATCGCAA
* * * * * *
16250167 CCCTTAGTCCGGTCCGATCTTAAACTGGGAATTAACTCCGTATGCTTCGACTGGGAATGAACTCC
452 CCCTCAGTCCGATCCGATCTTAAACTGGGAATGAACCCCGTATGCTTAGACTAGGAATGAACTCC
* * *
16250232 GTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCG
517 GTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCC
* * * * *
16250297 CAAGCTAGGGATTGGCCCGGTCCCCCTCTGTGTGTTGTCAATCCTGCTGCCACAACCCTTAGTTC
582 CAAGCTAGGGATCGGCCCGGTCCCCCTCTCTGTGTTGTCAATCCTGCTACCACAACCCTCAGTCC
* *
16250362 GGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAAAGAGCGGACGGG
647 GATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAAAGAGCGGACGGA
* * * *
16250427 CGGGCAGGCACTACGCCGGCCAAAGATGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTATGT
712 CGGGCAGGCACCACGCCAGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGGT
16250492 GGGTTTAGGCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCATAC
777 GGGTTTAGGCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCATAC
*
16250557 AATGGCCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGATGACTC
842 AATGGCCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGACGACTC
* * * * * *
16250603 GTTTTCTATTTTCCATGATTTTCGAAACTTTTAACGGATCGAGATTTTTTAAAAGTTTTTCAAAA
1 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAATTTTTCAGAA
* ** * * *
16250668 GGAGTTTTCGCCCCAAACTTCTTAGCCGTGATGCTTGTATTTTTATTGGCATGCACAAAAAAATT
66 GGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
** *
16250733 TTGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-AAAAAAGTGTCCCCATTTTAGACA
131 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
16250797 CTTTAATGGCTACTGGCAGCAATCCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTC
196 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTC
* *
16250862 GAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCATGT
260 GAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGT
* * * *
16250927 GCACAAACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGAT
325 GCGCAAA-CCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACGAT
* * * * * *
16250992 GGTGTCCCGATGAAGAAATATGCGACACCAGCACATGCCCGAGCCCAGC-ATATGCTGTCGCAAC
389 CGTGTCCCGATGAAAAAAAATACGACACCAGCACAAGCCCGAGCCCA-CTATATGCTATCGCAAC
* * *
16251056 CCTCAGTCCGATCCGATCTTAGACTTGGAATGAACCCCGTATGCTTAGTCTAGGAATGAACTCCG
453 CCTCAGTCCGATCCGATCTTAAACTGGGAATGAACCCCGTATGCTTAGACTAGGAATGAACTCCG
16251121 TATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCCC
518 TATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCCC
** * * * *
16251186 AAG-TCAGGGATCGGCTGGGTCCCCCTCTCTGTTTTGT-GATCCTGCTACCGCAACCCTCGGTCC
583 AAGCT-AGGGATCGGCCCGGTCCCCCTCTCTGTGTTGTCAATCCTGCTACCACAACCCTCAGTCC
* * * * *
16251249 GATCCGATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGCTAACCGATGAAACGAAG-GGGCGG
647 GATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAAAG-AGCGGACGG
* * * * *
16251313 ACGGGCGGGCACCACGTCAGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGG
711 ACGGGCAGGCACCACGCCAGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGG
* * * * *
16251378 TGGGTTT-GTGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
776 TGGGTTTAG-GCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCAT
* * * *
16251442 TCAATGGTCCCTTAATCCTTCATGTGAAGTTTCATGGCAAGACGACTC
840 ACAATGGCCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGACGACTC
*
16251490 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGA-TTTTTAAAAATTTTTACAGA
1 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAATTTTT-CAGA
* * *
16251554 AGGACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACAT
65 AGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
16251619 TCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
130 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
16251684 ACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTTAGTTCT
195 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCT
* *
16251749 CGAGGTTTGATTAGGGA-TAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATG
259 CGAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATG
16251813 TGCGCACAACCCCCCGGCCCGCCCGATC
324 TGCGCA-AACCCCCCGGCCC-CCCGATC
16251841 CCAGGCTGGC
Statistics
Matches: 1095, Mismatches: 123, Indels: 34
0.87 0.10 0.03
Matches are distributed among these distances:
879 3 0.00
880 91 0.08
881 102 0.09
882 96 0.09
883 1 0.00
886 18 0.02
887 428 0.39
888 354 0.32
889 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.23, T:0.27
Consensus pattern (887 bp):
GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAAATTTTTCAGAA
GGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCG
AGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTG
CGCAAACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACGATCG
TGTCCCGATGAAAAAAAATACGACACCAGCACAAGCCCGAGCCCACTATATGCTATCGCAACCCT
CAGTCCGATCCGATCTTAAACTGGGAATGAACCCCGTATGCTTAGACTAGGAATGAACTCCGTAT
GCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCCCAAG
CTAGGGATCGGCCCGGTCCCCCTCTCTGTGTTGTCAATCCTGCTACCACAACCCTCAGTCCGATC
CGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAAAGAGCGGACGGACGGG
CAGGCACCACGCCAGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGGTGGGT
TTAGGCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCATACAATG
GCCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGACGACTC
Found at i:16252326 original size:536 final size:535
Alignment explanation
Indices: 16251314--16252375 Score: 1693
Period size: 536 Copynumber: 2.0 Consensus size: 535
16251304 AAGGGGCGGA
* * **
16251314 CGGGCGGGCACCACGTCAGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGT
1 CGGGCGGGCACCACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* * *
16251379 GGGTTTGTGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATTC
66 GGGTTTGTGAACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
* *
16251444 AATGGTCCCTTAATCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
131 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCACGAT
* *
16251509 TTTTGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAGAAGGACTTTTGGCCCCAAACT
196 TTTGGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAAAAGGACTTTTGGCCCCAAACT
* * *
16251574 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTTGAAGTG
261 TCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAACATTCAGCTAAAAACTCGAAGTG
**
16251639 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAG
326 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAG
* * * * * *
16251704 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTTAGTTCTCGAGGTTTGATTAGGGATAG
391 CAAACCTGTAAAATCTCAAAGGCTCTTTAAGGGGGTGTCAGTTATCGAGCTTTAATGAGGGATAG
* * * *
16251769 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACCCCCCGGCCCG
456 GGCCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCATGTACGCACAACCCCCCGGCCC-
16251834 CCCGATCCCAGGCTGG
520 CCCGATCCCAGGCTGG
* * *
16251850 CGGGCGGGCACCACGCCGGTCAGAGAGACGGGATGCGCAAGCCATGGATCGATGGGGTGGTAGGT
1 CGGGCGGGCACCACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
*
16251915 GGGTTTAG-GAACATCTTCATATTTCTGTCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
66 GGGTTT-GTGAACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
16251979 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCG-TTTCTTATTTGTT-AC
130 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTTC-TATTT-TTCAC
* * * *
16252042 GATTTTGGAAATTTTTTACGGTTCGGGATTTTT-AAAATTTTTTCAAAAGGAGTTTTGGCCCCAA
193 GATTTTGGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAAAAGGACTTTTGGCCCCAA
16252106 ACTTCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAAGC-TTCAGCTAAAAACTCGA
258 ACTTCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAA-CATTCAGCTAAAAACTCGA
16252170 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTG
322 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTG
* *
16252235 GCAGCAAACCTGTAAAATTTCAAAGGCTCTTTAAGGGGGTGTCAGTTATTGAGCTTTAATGAGGG
387 GCAGCAAACCTGTAAAATCTCAAAGGCTCTTTAAGGGGGTGTCAGTTATCGAGCTTTAATGAGGG
* *
16252300 ATAAGGGCCCAATATAAGGGCCAAGTACCACCACCCATCGCCCATCATGTACGCACACCCCCCCG
452 AT-AGGGCCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCATGTACGCACAACCCCCCG
16252365 GCCCCCCGATC
516 GCCCCCCGATC
16252376 GTCGGAACCC
Statistics
Matches: 483, Mismatches: 38, Indels: 11
0.91 0.07 0.02
Matches are distributed among these distances:
535 220 0.46
536 260 0.54
537 3 0.01
ACGTcount: A:0.26, C:0.22, G:0.23, T:0.29
Consensus pattern (535 bp):
CGGGCGGGCACCACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
GGGTTTGTGAACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTTCTATTTTTCACGAT
TTTGGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAAAAGGACTTTTGGCCCCAAACT
TCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAACATTCAGCTAAAAACTCGAAGTG
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGCAG
CAAACCTGTAAAATCTCAAAGGCTCTTTAAGGGGGTGTCAGTTATCGAGCTTTAATGAGGGATAG
GGCCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCATGTACGCACAACCCCCCGGCCCC
CCGATCCCAGGCTGG
Found at i:16253316 original size:698 final size:699
Alignment explanation
Indices: 16251848--16253918 Score: 3200
Period size: 698 Copynumber: 3.0 Consensus size: 699
16251838 ATCCCAGGCT
* * * * * * * *
16251848 GGCGGGCGGGCACCACGCCGGTCAGAGAGACGGGATGCGCAAGCCATGGATCGATGGGGTGGTAG
1 GGCGGGCGGGCACTACACAGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* *
16251913 GTGGGTTTAGGAACATCTTCATATTTCTGTCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
66 GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
* *
16251978 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTCTTATTTGTT-AC
131 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTT-TTCAC
* ** * * *
16252042 GATTTTGGAAATTTTTTACGGTTCGGGA-TTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCCCAA
195 GATTTTTGAAACCTTTTACAGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* * **
16252106 ACTTCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAAGCTTCAGCTAAAAACTCGAA
260 ACATCGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
16252171 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGG
325 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGG
* * * * *
16252236 CAGCAAACCTGTAAAATTTCAAAGGCTCTTTAAGGGGGTGTCAGTTATTGAGCTTTAATGAGGGA
390 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCGAGGTTTAATGAGGGA
* * * * *
16252301 TAAGGGCCCAATATAAGGGCCAAGTACCACCACCCATCGCCCATCATGTACGCACACCCCCCCGG
455 TAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA-CCCCCCGG
* * * * *
16252366 CCCCCCGATCGTCGGAACCCCAATTCCACCAGTTAGATTCTCCGGCGATGGTGTCCCGACAAAGA
519 CCCCCCGATCGTCGGAACCCCAATTCCACCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGA
* * * ** *
16252431 AAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTACCGTAACCCTTAGTCTGGTCTGAT
584 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGAT
** **
16252496 CTTAGACTGCAAATGAACTCCGTATGCCTAAGCCAATTGACGAAAAGAACG
649 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGAACG
* *
16252547 GGCGGGCGGGCACTACGCCA-GCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGACAGGGTGGTA
1 GGCGGGCGGGCACTAC-ACAGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*
16252611 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCA
65 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
16252676 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCAC
130 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCAC
* * *
16252741 GATTTTTGAAACCTTTTATAGTTTGGGATTTTTTAAAAATTTTTCAGAAGGCGTTTTGGCCCCAA
195 GATTTTTGAAACCTTTTACAGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* * * *
16252806 ACCTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAA
260 ACATCGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * * * *
16252871 GTGTACAAGATTTTGTGACAATTTGAAAAAAATGTCCCCACTAT-AGACACTTCAATGGCTACTG
325 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAAAGGCTACTG
* * *
16252935 CCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
389 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCGAGGTTTAATGAGGG
* *
16253000 CT-AGGGGCCAATATAAGGCCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG
454 ATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG
* * * * **
16253064 CCCCCCAATCGCCGGAAACCAAACGCCACCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGA
519 CCCCCCGATCGTCGGAACCCCAATTCCACCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGA
* * * *
16253129 AAAATACGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGAT
584 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGAT
*
16253194 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACG
649 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGAACG
16253245 GGCGGGCGGGCACTACACAGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
1 GGCGGGCGGGCACTACACAGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
16253310 GTGGGTTAAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
66 GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
16253375 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACG
131 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACG
* *
16253440 ATTTTTGAAACCTTTTACAGTGTGGCATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
196 ATTTTTGAAACCTTTTACAGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
** *
16253505 CATTTTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
261 CATCGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
16253570 TGTACAAGATTTTGTGACCATTTGAAAAACGTGTCTCCATTTCAGACACTTTAAAGGCTACTGGC
326 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGC
*
16253635 AGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCGAGGTTTAATGAGGGAT
391 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCGAGGTTTAATGAGGGAT
*
16253700 AAGGGGCCAATATAAGGGGCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCC
456 AAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCC
16253765 CCCCGATCGTCGGAACCCCAATTCCACCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAA
521 CCCCGATCGTCGGAACCCCAATTCCACCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAA
* * * * * *
16253830 AATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCCGCCACAACCCTCGATCTGGTCCAATCA
586 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCT
* *
16253895 TAGGCT-GGAATGAACTACGTATGC
651 TAGACTGGGAATGAACTCCGTATGC
16253919 TTAGACTGGG
Statistics
Matches: 1242, Mismatches: 123, Indels: 15
0.90 0.09 0.01
Matches are distributed among these distances:
697 4 0.00
698 604 0.49
699 426 0.34
700 206 0.17
701 2 0.00
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (699 bp):
GGCGGGCGGGCACTACACAGGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACG
ATTTTTGAAACCTTTTACAGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
CATCGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGC
AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCGAGGTTTAATGAGGGAT
AAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCC
CCCCGATCGTCGGAACCCCAATTCCACCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAA
AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCT
TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGAACG
Found at i:16255682 original size:26 final size:26
Alignment explanation
Indices: 16255646--16255698 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16255636 CTGATCTGAT
**
16255646 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16255672 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16255698 C
1 C
16255699 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16257434 original size:26 final size:26
Alignment explanation
Indices: 16257398--16257450 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16257388 CTGATCTGAT
**
16257398 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
*
16257424 CTTAGGCTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16257450 C
1 C
16257451 GTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16259186 original size:26 final size:26
Alignment explanation
Indices: 16259150--16259202 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16259140 CTGATCTGAT
**
16259150 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
*
16259176 CTTAGGCTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16259202 C
1 C
16259203 GTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16260303 original size:26 final size:26
Alignment explanation
Indices: 16260274--16260326 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16260264 CTAGTCCGAT
16260274 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16260300 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16260326 C
1 C
16260327 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16262270 original size:860 final size:862
Alignment explanation
Indices: 16260217--16262706 Score: 3225
Period size: 860 Copynumber: 2.9 Consensus size: 862
16260207 ATACAATGGT
* *
16260217 GCACCAGCAAATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCTAGTCCGATCTTAGACT
1 GCACCAGCACATGCCCGAGCCCAGCATGTGCT-GCGCAACCCTCGGTC-AGTCCGATCTT-GA-T
16260282 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
62 -GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* ** *
16260347 AGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGTAAGTTGGGGATCGATCGGGTTCCCC
126 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGGTCCCCC
* * * * * *
16260412 ACTACGTGCTGCCGATCCTACTACCGTAACCCTTGGTCTGATCTGATCTTAGACTGAGAATGAAC
191 TCTACGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAAC
* * *
16260477 TCCGTATGCCTAAGCCAACCGATGAAACT-AGCGGGCGGGCGGGCCGGCACTACGCTGGCCAGAG
256 TCCGTATGCCTAAGCCAACCGACGAAA-TGAGCGGGCGGGCAGG-C-GCACTACGCCGGCCAGAG
*
16260541 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTC
318 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
** * *
16260606 TGCTGTGCCAATGCCTTTTTTCTGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCATGTGA
383 TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
* * *
16260671 GGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA-TAATTTTCGAAACTTTTTACGGTTC-GA
448 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTC-AAACTTTTTACGGTTCAG-
* * *
16260734 GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTTGTAGAAGTGATCCTTGTATTT
511 GATTTTTTAAAATTTTTTCAGAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TT
* *
16260799 TTTTTTGGTATGCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
575 TTTTTTGGCATGCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTA
16260864 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATG
640 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATG
* * * *
16260929 CTTTTTAAGGGGGTGTGACTTCTCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAAT
705 CTATTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCC----
16260994 ACCAGCACCCATCACACATCATGTGCACAAACCCCCTCGGCCCGCCGATCGCCGAAACCCCAATG
766 ACCAGCACCCAT---ACA-CATGT--AC-AA--CCCT-------CCGATCGCCGAAACCCCAATG
* *
16261059 CCGCCGGTCAGGTTATCCAGCGATGGTGTCCCGGTGAAGAAAAATTCA
815 CCGCCGGTCAGGTTATCCAGCGATGGTGTCCCGGCGAAGAAAAATACA
**
16261107 GCACCAGCACATGCTTGAGCCCAGCATGTGCTGCTGCAACCCTC-G---GT-C---C----T-G-
1 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGC-GCAACCCTCGGTCAGTCCGATCTTGATGGA
* *
16261158 -T---CT--G-AT-CTTATACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACCAGCG
65 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * *
16261215 TGCGGGCGCTCAACCGGCCAGAGGGACGGGTTGCGCAAGCCGGGGATCGATCGAGTCCCCCTCT-
130 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGGTCCCCCTCTA
* * *
16261279 -GTGTCTTGTCGATCCTGCTGCCGTAACACTCGGTGTGGTCTGATCTTAGACTGGGAATGAACTC
195 CGTG-C-TGTCGATCCTGCTGCCGTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTC
* *
16261343 CGTATGCCTAAGTCAACCGACGAAATGAGCGGGCGGG-TGG-GCACTACGCCGGCCAGAGAGGCG
258 CGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCAGGCGCACTACGCCGGCCAGAGAGGCG
* * *
16261406 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGCTGGATTTAGGCACATCTTCATATTTTTGCCA
323 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
* *
16261471 CGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGCTCCCTTAAGCCTTCATGTGAAGTTT
388 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * *
16261536 CATGGCAAGACGACTCATTTTTTATATTTCACGATTTTTCAAACTTTTTACGGTTCAGGATTTTT
453 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTCAAACTTTTTACGGTTCAGGATTTTT
* *
16261601 TAAAATTTTTTCAAAAGAAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
518 TAAAATTTTTTCAGAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
*
16261666 CATGCACAATAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGT
583 CATGCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGT
16261731 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTATTTAA
648 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTATTTAA
* * * * *
16261796 GGGGGTGTGTGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATCATGTG-C-GCA-CACCCG
713 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACAT-AAGGGCCACCAGCACCCA
* * * * *
16261858 T-C-CA-GT-C-A-CCT-CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTTC-GACGATGG
777 TACACATGTACAACCCTCCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTATCCAG-CGATGG
16261915 TGTCCCGGCGAAGAAAAATAC-
841 TGTCCCGGCGAAGAAAAATACA
* * * *
16261936 GACACCAGCGCATGCCCAAGCCCAGCATGTGTTGTCGGAACCCTCGGTCAGATCCGATCTTTGAT
1 G-CACCAGCACATGCCCGAGCCCAGCATGTGCTG-CGCAACCCTCGGTCAG-TCCGATC-TTGA-
* * *
16262001 TGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCGTAAGTCAACCCACAAAAC
61 TG-GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * *
16262066 GAGCGTGCAGGTGCTCAGCTGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGATCGGGTCCCC
125 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGGTCCCC
* * * *
16262131 CTCTACGTGCTGTCGATCTTGCTGTCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAA
190 CTCTACGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAA
* * * * * *
16262196 CTCTGTATGCCTAAGCCAACCGACGAAATGAGTGGACGGGCAGGCATGCACTATGCCAGCCAAAG
255 CTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCAGGC--GCACTACGCCGGCCAGAG
* * * *
16262261 AGACGGGATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGGGTTTAGGCACAGCTTTATATTTC
318 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* *
16262326 TACCATGCCAATGCCATTTTTCTGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
383 TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
* * * * *
16262391 AGTTTCATGACAAGACGACTTGTTTTCTATTTTTGACGATTTTTGAAACTTTTTACGATTCAGGA
448 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTCAAACTTTTTACGGTTCAGGA
* * * * *
16262456 TTTTATAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACATGG--CACGTGATCCTTGTATTTTT
513 TTTTTTAAAATTTTTTCAGAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* *
16262519 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
578 TTTGGCATGCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-AAA
* * * *
16262584 AAAA-TATCCCCATTTTAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
642 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCT
* * *
16262648 CTTT-AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCA
707 ATTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCA
16262707 AGTACCAGCA
Statistics
Matches: 1413, Mismatches: 142, Indels: 122
0.84 0.08 0.07
Matches are distributed among these distances:
829 2 0.00
830 93 0.07
831 2 0.00
834 1 0.00
835 1 0.00
836 1 0.00
838 3 0.00
839 1 0.00
841 1 0.00
843 1 0.00
845 1 0.00
846 2 0.00
847 3 0.00
849 2 0.00
852 2 0.00
853 6 0.00
854 3 0.00
855 2 0.00
856 188 0.13
857 48 0.03
858 139 0.10
859 186 0.13
860 473 0.33
861 7 0.00
862 3 0.00
863 4 0.00
864 186 0.13
865 2 0.00
866 1 0.00
868 2 0.00
871 1 0.00
873 1 0.00
875 1 0.00
881 1 0.00
884 1 0.00
885 2 0.00
889 2 0.00
890 38 0.03
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (862 bp):
GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCGCAACCCTCGGTCAGTCCGATCTTGATGGAA
TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGATCGGGTCCCCCTCTAC
GTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGT
ATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCAGGCGCACTACGCCGGCCAGAGAGGCGGGA
TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGC
CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTCAAACTTTTTACGGTTCAGGATTTTTTAA
AATTTTTTCAGAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCAT
GCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTC
CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTATTTAAGGG
GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCACCAGCACCCATACA
CATGTACAACCCTCCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTATCCAGCGATGGTGTCC
CGGCGAAGAAAAATACA
Found at i:16264229 original size:26 final size:26
Alignment explanation
Indices: 16264191--16264243 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16264181 CCAGTCTAAT
* *
16264191 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
16264217 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
16264243 C
1 C
16264244 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:16265766 original size:12 final size:12
Alignment explanation
Indices: 16265745--16265780 Score: 56
Period size: 12 Copynumber: 3.1 Consensus size: 12
16265735 TTGATGAGGG
16265745 ATAT-GGGGCCA
1 ATATAGGGGCCA
16265756 ATATAGGGGCCA
1 ATATAGGGGCCA
*
16265768 ATATAAGGGCCA
1 ATATAGGGGCCA
16265780 A
1 A
16265781 GTACTAGCAC
Statistics
Matches: 23, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
11 4 0.17
12 19 0.83
ACGTcount: A:0.36, C:0.17, G:0.31, T:0.17
Consensus pattern (12 bp):
ATATAGGGGCCA
Found at i:16266416 original size:879 final size:862
Alignment explanation
Indices: 16262841--16266859 Score: 4925
Period size: 878 Copynumber: 4.6 Consensus size: 862
16262831 CCAGCAACGG
* * ** * * * *
16262841 GTTTCCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTTGGATTTTTTTAAATTTCTACAAAA
1 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* * * * * *
16262906 GCAATTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCAAAAAAAAATT
66 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * * *
16262971 CAGCTAAAACCTCGAAATGTACAAGATTTTTTGACCATTTGAAAAAGGTGTCCCCATTTCAGACA
131 CAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
16263036 CTTTAATGGGTACTGGTAGCAAACCTGTAAAAACTCAAATGCTCTTTAAAGGGGTGTGAGTTCTC
196 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
** * * * *
16263101 GAATTTTGATGA-GGATAGGGGGCCAATATAAGGTCTAACTACCAGCACCCATCGTACATCATGT
261 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * *
16263165 GCG-A-A---CAC--CTCCCCCGATCATC-GAAACCCCAATGCCGACGATCAGGTTCTCCGACGA
326 GCGCACACCCCCCGGCCCCCCCGATCGTCAG-AACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
** * * * * * * *
16263222 TCATGTCCCGATGAAAAAAAATACGGCACCAGCACAAGCCCGAGCCCAGTATGTGCTGTCGTAAC
390 TGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
*
16263287 CCTCGGCCCGATCCAATCTTAAACTGGGAATTAACTCCGTATGCTTCGACTGGGAATGAACTCCG
455 CCTC-G---G------TC-----C---G-A-T--CT-CG-AT-CTTAGACTGGGAATGAACTCCG
* * * * * * * * *
16263352 TATGCCTAAGTCAACCCATGAAACTAGCGTGCGGGTGGTCAGTCGGCCAGATGGGTGGGATGCGT
495 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGC
* * ** * *
16263417 AAGCTGGGGATC-GATCGGGTCCCCCTCTGCGTGCTACCAATCCTACTGCCACAACCCTCTGTCC
560 AAGCCGGGGATCAG-TCGGGTCCCCCTCTGCGTGCTGCCAATCCTGTTGCCGCAACCCTC-ATCC
* * * *
16263481 GCTCCGATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGACGGGT
623 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGGCGGGC
*
16263546 GGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
688 GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * * *
16263611 GGCTTAGGAACATCTTCATATTTTTGCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
753 GGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
16263676 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
818 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* * * * *
16263721 GTTTTCTATTTTTCTCGATTTTTGAAACTTTTTACGATTCAGGATTTTATAAATTTTTTTCAGAA
1 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* * *
16263786 GGAGTTTTGGCCCCAAACATGG--CACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
66 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* *
16263849 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGAGTCCCCATTTCAGACA
131 CAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
16263914 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTC
196 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
16263979 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
261 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * *
16264044 GCGCACACCCCCCGGCCACCCCCAATCGTCGGAACCCCAATACCGTCGGTCAGGTTCTCCGGCGA
326 GCGCACACCCCCCGGCC-CCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
* ***
16264109 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGGATAGCATGTGCTGCCGCAAC
390 TGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
*
16264174 CCTCGGTCCAGTCTAATCTTAGACTTGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCG
455 CCTC-G----G-----TC-----C---G-AT---CT-CG-AT-CTTAGACTGGGAATGAACTCCG
* * *
16264239 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATACGC
495 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGC
* * * * *
16264304 AAGTCGGGGATCAG-CTGGGTCCCCTTCTGTGTGCTG-CGATCCT-TCTGCC-CGACCCTTCATC
560 AAGCCGGGGATCAGTC-GGGTCCCCCTCTGCGTGCTGCCAATCCTGT-TGCCGCAACCC-TCATC
* * *
16264365 CAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGG
622 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGGCGG
*
16264430 GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGG
686 GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
*** * *
16264495 TATTTTTAGGCACATCTTCATATTTTTACCATGCCAAAGCCATTTTTCTGGCTTGTAAATTCATA
751 TGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
16264560 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
816 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
*
16264607 GTTTTGCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGA
1 GTTTT-CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
* *
16264672 AGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTCGGCATGCACAAAAAAAT
65 AGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
16264737 TAAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
130 TCAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * *
16264802 ACTTTAATAGCTACTGCCAGCAAACCTGTAAAATCTCAAATTCTTTTTAAGGGGGTGTGAGTTCT
195 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
16264867 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA-CTACCCATCGCACGTCCT
260 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-ACCCATCGCACATCAT
*
16264931 GTGCGCACACCCCTCCCGGCCCCCGCCGATCGTCAGAATCCCAATGCCGCCGGTCAGGTTCTCCG
324 GTGCGCACA-CCC-CCCGGCCCCC-CCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * *
16264996 GCGATGGTGTCCC-AGCGAAGAAAAATACGGCACCAACACATGCCCAAGCCCAGCATGTGCTGCT
386 ACGATGGTGTCCCGA-CGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * *
16265060 GCAACCCTCAGTCTGGTC-CGATCTTAGACTGGGAATGAACTCCGTATGCCTCAGTCAACCCACG
450 GCAACCCTCGGTCCGATCTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* ** ** * *
16265124 AAATGAGCGTGCGGGCATTCAGCC-AGCCAGAGGGGCGGGATGCGCAAGCTAGGGATCAGCCAGG
515 AAACGAGCGTGCGGGCGCTCAGCCGA-CCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGG
* * * * * *
16265188 TCCCCCTCTTCGTGCTGCCAATCCTGGTGCCGTAACCCTCAATCCGAT-CGAATCTTACATTGGG
579 TCCCCCTCTGCGTGCTGCCAATCCTGTTGCCGCAACCCTC-ATCCGGTCCG-ATCTTAGACTGGG
* * * * **
16265252 AATGAACTCCGTATGCCTAAGTCAACCGACGGAACGA---GCGGGTGGGCGGGCATTACGCCGAT
642 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGGCGGGCGGGCGGGCACTACGCCGGC
16265314 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
707 CAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * *
16265379 ATTTCTGCCATACCGATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
772 ATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
*
16265444 TGTGAAGTTTCATGGCAAGATGACTC
837 TGTGAAGTTTCATGGCAAGACGACTC
* * * * * *
16265470 GTTTTCTAGTTTTCATGA-TTTTCAAACATTTTTATGGTTCGGGATTTGTCAAAATTTTTTCAGA
1 GTTTTCTATTTTTCACGATTTTTGAAAC-TTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
* * *
16265534 AGGAGTTTTGGCCCCAAACTTGGTAGA-AGTGATCATTGTTTTTTTGTTGGCATGCAAAAAAAAA
65 AGGAGTTTTGGCCCCAAACTTGGTAGACA-TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
16265598 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
129 TTCAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16265663 CACTTTAATGGCTACTAGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGCT-TGAGTT
194 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG-TGTGAGTT
*
16265727 CTCGAGGTTTGATGAGGGATATGGGGCCAATATAGGGGCCAATATAAGGGCCAAGTACTAGCACC
258 CTCGAGGTTTGATGAGGGATA----G--------GGGGCCAATATAAGGGCCAAGTACCAGCACC
* *
16265792 CATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCAGAACCACAATGCCGCTGGT
311 CATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCAGAACCCCAATGCCGCCGGT
* * *
16265857 CAGGTTCTCCGACGATGATGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCTAGC
375 CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGC
*
16265922 ATGTGCTGCCGCAACCCTCGGTCCGATCT-GATCTTAGATTGGGAATGAACTCCGTATGCCTAAG
440 ATGTGCTGCCGCAACCCTCGGTCCGATCTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
16265986 TCAACCCATGAAACGAGTGTACGGGCGCTCAGCCGACCAGAGGGGC-GAATGTGCAAGCCGGGGA
505 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * * *
16266050 TCGGTCGGGTCCCCCGCTGCATGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGATCTT
570 TCAGTCGGGTCCCCCTCTGCGTGCTGCCAATCCTGTTGCCGCAACCCTC-ATCCGGTCCGATCTT
*
16266115 AGACAGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGAGCGGGCGGGCGGGCGG
634 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A--AACGAG-GGGCGGGCGGGCGG
* *
16266180 GCACTACGCCGGCCAGAGAGGCGGGGTGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTA
694 GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
16266245 GGCACATTTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTC
759 GGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTC
* * *
16266310 TCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACAC
824 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* *
16266349 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTAGGGTTCGGGATTTTTTAATATTTTTTCAGAA
1 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* *
16266414 GGAGTTTTGG-CCCAAACTTGGTAGACATGATCCTTGTGTTTTTGTTGGCATGTACAAAAAAATT
66 GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
16266478 CAGCTAAAACCTCGTAGTGCACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTCCAGACA
131 CAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * * *
16266543 CTTTAGTGGCTACTGGCAGCAAACCTATAAAATCTCAAATTCTCTTAAAGGGGGTGTGAGTTCTT
196 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * * ** * *
16266608 GAAGTTTAATGATGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTACGCATCCTGT
261 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* *
16266673 GCGCACA----------CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
326 GCGCACACCCCCCGGCCCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * * * * * **
16266728 GGTGTCCTGACGAAGAAAAATATGACACCAGCACAAGCTCGAGCCCAGCATGTGCTACTGCAATG
391 GGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* * * ** *
16266793 CTCGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACGGAGGAAACGA
456 CTCGGTCCGATCTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
16266857 GCG
521 GCG
16266860 GGCGAGCGGG
Statistics
Matches: 2768, Mismatches: 307, Indels: 153
0.86 0.10 0.05
Matches are distributed among these distances:
854 1 0.00
855 155 0.06
861 9 0.00
862 240 0.09
863 173 0.06
865 105 0.04
866 65 0.02
867 56 0.02
869 1 0.00
871 99 0.04
872 179 0.06
873 13 0.00
874 52 0.02
875 6 0.00
877 1 0.00
878 347 0.13
879 279 0.10
880 80 0.03
881 3 0.00
884 2 0.00
885 60 0.02
886 192 0.07
887 302 0.11
888 6 0.00
889 228 0.08
890 7 0.00
891 107 0.04
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (862 bp):
GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
GGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCGGCCCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
GGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
CTCGGTCCGATCTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
GCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCCT
CTGCGTGCTGCCAATCCTGTTGCCGCAACCCTCATCCGGTCCGATCTTAGACTGGGAATGAACTC
CGTATGCCTAAGCCAACCGACGAAACGAGGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGC
GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACC
ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
TCATGGCAAGACGACTC
Found at i:16268863 original size:26 final size:26
Alignment explanation
Indices: 16268825--16268877 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16268815 CCGATCCGAT
*
16268825 CTTAGACTTGGAATGAACCCCGTATG
1 CTTAGACTAGGAATGAACCCCGTATG
* *
16268851 CTTAGTCTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACCCCGTATG
16268877 C
1 C
16268878 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACCCCGTATG
Found at i:16269322 original size:887 final size:886
Alignment explanation
Indices: 16267473--16269592 Score: 3010
Period size: 887 Copynumber: 2.4 Consensus size: 886
16267463 CCAGCAATGG
** *
16267473 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTC-AGATTGTTTTTAATTTTTTCAGA
1 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TTCGAGATT-TTTAAAAATTTTTCAGA
* * *
16267537 AGCAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCAAAAAAAAAA
64 AGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAAA
* *
16267602 TTCAGCTAAAAACTTGAAATGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGA
128 TTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16267667 TACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTC
193 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGAGTTC
* * * *
16267732 TCGAAGTTTGATGA-GGATAGGGGGCCAATATAAGGTCCAACTACCAGCACCCATCGTACATCAT
257 TCGAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCAT
* *
16267796 GTGCGC--A--CACC--TCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACGA
322 GTGCGCAAACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACGA
** * *
16267855 TCGTGTCCCGATGAAAAAAAATACGGTACCAGCACAAGCCCGAGCCCACTATGTGCTATCGTAAC
387 TCGTGTCCCGATGAAAAAAAATACGACACCAGCACAAGCCCGAGCCCACTATATGCTATCGCAAC
* * * * *
16267920 CCTCAGTCCGGTCCGATCTTAAACTGGGAATTAACTCCGTATGCTTCGACTGGGAATGAACTCCG
452 CCTCAGTCCGATCCGATCTTAAACTGGGAATGAACCCCGTATGCTTAGACTAGGAATGAACTCCG
* *
16267985 TATGCCTAAGTCAAACCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGC
517 TATGCCTAAGTCAAACCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGC
* * * * *
16268050 AAGCTAAGGATTGGCCCGGTCCCCCTCTGTGTGTTGTCGATCCTGCTGCCACAACCCTTAGTTCG
582 AAGCTAAGGATCGGCCCGGTCCCCCTCTCTGTGTTGTCGATCCTGCTACCACAACCCTCAGTCCG
* * *
16268115 GTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAAAGAGCGAACGGGC
647 ATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAAAGAGCGAACGGAC
* * *
16268180 GGGCAGGCACTACGCCGGCCAAAGATGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTACGTG
712 GGGCAGGCACCACGCCAGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTACGTG
16268245 GGTTTAGGCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCATACA
777 GGTTTAGGCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCATACA
*
16268310 ATGGCCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGATGACTC
842 ATGGCCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGACGACTC
* * * * * *
16268355 GTTTTCTATTTTCCATGATTTTCGAAACTTTTAACGGATCGAGATTTTTTAAAAGTTTTTCAAAA
1 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGA-TTTTTAAAAATTTTTCAGAA
* * ** * * *
16268420 GGAGTTTTCGCCCCAAGCTTCTTAGCCGTGATGCTTGTATTTTTATTGGCATGCACAAAAAAATT
65 GGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
** * *
16268485 TTGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-AAAAAAGTGTCCCCATTTTAGACA
130 CAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
16268549 CTTTAATGGCTACTGGCAGCAATCCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTC
195 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTC
* *
16268614 GAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCATGT
259 GAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGT
* * * *
16268679 GCACAAACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGAT
324 GCGCAAA-CCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACGAT
* * * * * * * *
16268744 GGTGTCCCGATGAAGAAATATGCGACACCCGCACATGCCCGAGCCTAGC-ATATGCTGTCGCAAC
388 CGTGTCCCGATGAAAAAAAATACGACACCAGCACAAGCCCGAGCCCA-CTATATGCTATCGCAAC
* * *
16268808 CCTCAGTCCGATCCGATCTTAGACTTGGAATGAACCCCGTATGCTTAGTCTAGGAATGAACTCCG
452 CCTCAGTCCGATCCGATCTTAAACTGGGAATGAACCCCGTATGCTTAGACTAGGAATGAACTCCG
*
16268873 TATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGC
517 TATGCCTAAGTCAAACCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGC
* ** * * *
16268938 AAG-TCAGGGATCGGCTGGGTCCCCCTCTCTGTTTTGT-GATCCTGCTACCGCAACCCTCGGTCC
582 AAGCT-AAGGATCGGCCCGGTCCCCCTCTCTGTGTTGTCGATCCTGCTACCACAACCCTCAGTCC
* * * * **
16269001 GATCCGATCTTAGACTGGGAATGAGCTCCGTATGCCTAAGCTAACCGACGAAACGAAG-GGGCGG
646 GATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAAAG-AGCGAACGG
* * * * *
16269065 ACGGGCGGGCACCACGTCAGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
710 ACGGGCAGGCACCACGCCAGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTACG
* * * * *
16269130 TGGGTTT-GTGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
775 TGGGTTTAG-GCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCAT
* * * *
16269194 TCAATGGTCCCTTAATCCTTCATGTGAAGTTTCATGGCAAGACGACTC
839 ACAATGGCCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGACGACTC
* *
16269242 GTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAGAA
1 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTT-CAGAA
* * *
16269307 GGACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATT
65 GGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
16269372 CAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
130 CAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* *
16269437 CTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTTAGTTCTC
195 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTC
* *
16269502 GAGGTTTGATTAGGGA-TAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGT
259 GAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGT
16269566 GCGCACAACCCCCCGGCCCGCCCGATC
324 GCGCA-AACCCCCCGGCCC-CCCGATC
16269593 CCAGGCTGGC
Statistics
Matches: 1089, Mismatches: 129, Indels: 34
0.87 0.10 0.03
Matches are distributed among these distances:
879 3 0.00
880 91 0.08
881 98 0.09
882 96 0.09
883 3 0.00
886 18 0.02
887 426 0.39
888 352 0.32
889 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.23, T:0.27
Consensus pattern (886 bp):
GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTCAGAAG
GAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
AGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGA
GGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGC
GCAAACCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGACGATCAGGTTCTCCGACGATCGT
GTCCCGATGAAAAAAAATACGACACCAGCACAAGCCCGAGCCCACTATATGCTATCGCAACCCTC
AGTCCGATCCGATCTTAAACTGGGAATGAACCCCGTATGCTTAGACTAGGAATGAACTCCGTATG
CCTAAGTCAAACCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGC
TAAGGATCGGCCCGGTCCCCCTCTCTGTGTTGTCGATCCTGCTACCACAACCCTCAGTCCGATCC
GATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAAAGAGCGAACGGACGGGC
AGGCACCACGCCAGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGATGGTACGTGGGTT
TAGGCACATCTTCAAATTTCTACCATGCCAATACCAGTTTTCTGGCTTGTAAATTCATACAATGG
CCCCTTAAGCCTTCATGAGAAGTTTCATGGCAAGACGACTC
Found at i:16270078 original size:536 final size:535
Alignment explanation
Indices: 16269066--16270127 Score: 1765
Period size: 536 Copynumber: 2.0 Consensus size: 535
16269056 AAGGGGCGGA
* * *
16269066 CGGGCGGGCACCACGTCAGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
1 CGGGCGGGCACCACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* * *
16269131 GGGTTTGTGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATTC
66 GGGTTTGTGAACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
* * *
16269196 AATGGTCCCTTAATCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGAT
131 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTCTTATTTTTCACGAT
* *
16269261 TTTTGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAGAAGGACTTTTGGCCCCAAACT
196 TTTGGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAAAAGGACTTTTGGCCCCAAACT
* * *
16269326 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTTGAAGTG
261 TCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAACATTCAGCTAAAAACTCGAAGTG
* *
16269391 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAG
326 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAG
* * *
16269456 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTTAGTTCTCGAGGTTTGATTAGGGATAG
391 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAG
*
16269521 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACAACCCCCCGGCCCG
456 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGAAC-ACCCCCCGGCCC-
16269586 CC-CGATCCCAGGCTGG
519 CCTCGATCCCAGGCTGG
* * * *
16269602 CGGGCGGGCACTACGCCGGTCAGAGAGACGGGATGCGCAAGCCATGGATCGATGGGGTGGTAGGT
1 CGGGCGGGCACCACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
*
16269667 GGGTTTAG-GAACATCTTCATATTTCTGTCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
66 GGGTTT-GTGAACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
16269731 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTCTTATTTGTT-ACG
130 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTCTTATTT-TTCACG
* * * *
16269795 ATTTTGGAAATTTTTTACGGTTCGGGATTTTT-AAAATTTTTTCAAAAGGAGTTTTGGCCCCAAA
194 ATTTTGGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAAAAGGACTTTTGGCCCCAAA
16269859 CTTCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAAGC-TTCAGCTAAAAACTCGAA
259 CTTCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAA-CATTCAGCTAAAAACTCGAA
16269923 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGG
323 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGG
*
16269988 CAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGA
388 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGA
16270053 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGAACACCCCCCGGC
453 TA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGAACACCCCCCGGC
16270118 CCCCTCGATC
517 CCCCTCGATC
16270128 GTCGGAACCC
Statistics
Matches: 491, Mismatches: 30, Indels: 11
0.92 0.06 0.02
Matches are distributed among these distances:
534 2 0.00
535 231 0.47
536 255 0.52
537 3 0.01
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (535 bp):
CGGGCGGGCACCACGCCAGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
GGGTTTGTGAACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCGTTTCTTATTTTTCACGAT
TTTGGAAACTTTTTACGGTTCGAGATTTTTAAAAATTTTTACAAAAGGACTTTTGGCCCCAAACT
TCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAACATTCAGCTAAAAACTCGAAGTG
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAG
CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAG
GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGAACACCCCCCGGCCCCC
TCGATCCCAGGCTGG
Found at i:16271315 original size:880 final size:877
Alignment explanation
Indices: 16269601--16278170 Score: 10294
Period size: 864 Copynumber: 9.8 Consensus size: 877
16269591 TCCCAGGCTG
* * * *
16269601 GCGGGCGGGCACTACGCCGGTCAGAGAGACGGGATGCGCAAGCCATGGATCGATGGGGTGGTAGG
1 GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
16269666 TGGGTTTAGGAACATCTTCATATTTCTGTCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
66 TGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
*
16269731 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGACTCG-TTTCTTATTTGTT-AC
131 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC-TATTT-TTCAC
* * ** *
16269794 GATTTTGGAAATTTTTTACGGTTCGGGA-TTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCCCAA
194 GATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAA
* * **
16269858 ACTTCGTAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAAGCTTCAGCTAAAAACTCGAA
259 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAA
*
16269923 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGG
323 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* *
16269988 CAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGA
388 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* *
16270053 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCG-AACACCCCCCGG
453 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACACCCCCCGG
* * *
16270117 CCCCCTCGATCGTCGGAACCCCCATGCCGTCGGTCAGGTTCT-CGAGCGATGGTGTCCCAATGAA
518 CCCCC-CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-CGATGGTGTCCCGACGAA
** * * * * * * * *
16270181 GAAAAAGGC-AGCACCAACACATGCCTGAGCCCAGCATGTGCTGTCGCAACCCTTGGTATGGTGT
581 GAAAAATACGA-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGATCT
* ** *
16270245 GATCTTATACAAGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
645 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* ** * * **
16270310 CCTACGAAACGAGCGTGCATGCGCTCAGCTGGCCAGAGGGGCGGGATGTGCAAGTTAGGGATCGA
710 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCGA-GGATCG-
* * * * ** * *
16270375 ATC-GGTCCCCCTCTACGTGCTGCCGATCTTGCTGTCACAACCCTCAGTCTGGTCCAATCTTAGA
773 -GCGGGTCCCCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTCTGGT-CGATCTTAGA
*
16270439 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA
836 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
16270481 GCGGGCGGGCATTATGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
1 GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
*
16270546 TGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
66 TGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
16270611 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
131 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* ** * * *
16270676 TTTTTGAAACTTTTTACAGTTCGGGATTTTTTAAAATTCTTTCAGAAGGTGTTTTGGCCCCGAAC
196 TTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC
* * * *
16270741 TTCGTAGACGTGATCCTTGTATTTTTGTTGGCATGTAGAAAAACTTCAGCTAAAAACTCGAAGTG
261 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTG
* * * *
16270806 TACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTTAGACACCTTACTGGCTACTGGCAG
326 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
16270871 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
391 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
16270936 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC-T-TGCGCGACACCCCCCTGGCC
456 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACACCCCCC-GGCC
* * **
16270999 CCCCGATCGCCGGAATCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGCATCCCGACGAAGAAA
520 CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAA
* * *
16271064 AATACGACACCAACACAT-CCTCGAGCCCAGCATGTGCTGCCGCAACCCTTGATCTGATCCGATC
585 AATACGACACCAGCACATGCC-CGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGATCTGATC
* * * * *
16271128 TTAGACAGGGAATGAACTTCGTATGCTTAGTTCTGGAAATTAACTCCGTATGCCTAAGTCAACCC
649 TTAGACTGGGAATGAACTCCGTATGCTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * *
16271193 ACGAGACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATACGCAAGTCGAGGATAGGTCG
713 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CGAGGATCGG-CG
* * * * *
16271258 GGTCCCCCTCAACGTGCTGCTGATCCTGTTATCGTAACCCTTGGTCAGGTGCAATCTTAG-CTTG
776 GGTCCCCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTCTGGT-CGATCTTAGAC-TG
* *
16271322 GGAATGAACTCCGTATGCCTAAGCCAACTGACGAAATGAA
839 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-A
* *
16271362 TGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGT
1 ---GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
16271427 AGGTGGGTTTAGGCACACCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
63 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTC
* *
16271492 ATACAATGGTCCCTTAAGCCTTCGTGTGAAGTTTCATGGCAAGACGAATCGTTTTCTATTTTTCA
128 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * *
16271557 CGATTTTTGAAACTTTTTACGGTTCAAAATTTTTTAAAATTATTTCAGAAGGAATTTTGGCCCCA
193 CGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCA
* * * * *
16271622 AACTTGGTAGACATGACCCCTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCAAAAAACTCG-
258 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGA
* *
16271686 AGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTG
322 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
** * * * *
16271751 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAAGTGTGTGAGCTCTCGAGGATTGATAAGGG
387 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* * * *
16271816 AAAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCATCGCATATCATCTGCGC-ACACCTCCCC
452 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACA----CCC
*
16271880 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCTCCGACGATGGTGTCCCGA
513 CCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGA
* * * * *
16271945 CGAAGAAAAATGCGGCA-C--CACATGCCCGAGCCCATCATGTGCTGCAGCAACCCTC-AGTCCG
577 CGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGA-TCTG
* *
16272006 ATCTGATCTTAGACTGAGAATGAACTCCGTATGCTTAGACTTGGAATGAACTCCGTATGCCTAAG
641 ATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
16272071 TCAACCCACGAAACAAGCGTGCAGGCGCTCAGCCGG-C-------C---A---G--A--G-GG--
706 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCGAGGAT
* * * * *
16272115 C--CGGGTCCCCCTCTGCGTGCTG-TCGATCCTGCTACCGCAACCCTCGATCCGGTCCGATCTTA
771 CGGCGGGTCCCCCTCTACGTGCTGCT-GATCCTGCTATCGTAACCCTCGGTCTGGT-CGATCTTA
** *
16272177 GACTGAAAATAAACTCCGTATGCCTAAGCCAACCGACGAAACGA
834 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
16272221 GCGTGTGGGCAGGAGGGCACTATGCCGGCCACAGAGGCGGGATGCGCAAGCCGTGGATCGATA--
1 GC----GGGC----GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * *
16272284 -AGGT-GGTGGGTTTAGGCACATCTTCATATTTCTGCCCTGCCAATGCCATATTTCTGGCTTGTA
58 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
* *
16272347 AATTCATACAATGGTCACTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATT
123 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** ** ** * * * *
16272412 TTTCATGATTTTCAAAAAGTTTTACGGTTCGGGATTTTTTAAAAATTTTTCAGAAGCATTTTTAG
188 TTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
*
16272477 -CCCAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
253 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAA
* * * *
16272541 CTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCAGTTAAGCCACTTTAATGGC
317 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * *
16272606 TACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTCAT
382 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* ** * *
16272671 GAGGGATAGAGGGCCAATATAAGGGAGAAGTACCAGCACCCATTGCACATCTTGTGCGC-ACACC
447 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACA-C
* * * *
16272735 CCCCCGACCCTCCCGATCATCGGAACCCCAATCCCGTCGGCCAGGTTCTCC-AGCGATGGTGTCC
511 CCCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-CGATGGTGTCC
** * * **
16272799 CGGTGAAGAAAAATGCGACACTAGCACATGCCCGAGGACAGCATGTGCTGCCGCAA-CC-C--TC
574 CGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATC
* *
16272860 -G----G-TC-----C---G---G---TCC-AAT-CTTAGACAGGGAATGAACTCCGTATGCCTA
639 TGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* ** *** *
16272903 AGTCAACCCACGAAACGAGTGTGCGGGCGCTCAGCTAGCCAGAGGGGCGGGATGCATTGATCGAG
704 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC-GCAAGCGAG
* * * * * * *
16272968 GACCGGCGGGGTCCCCCTTTGCGTGCTACCGATCTTGCTGCA-C-TAACCCTCGAT-TCGGTCTG
768 GATCGGC-GGGTCCCCCTCTACGTGCTGCTGATCCTGCT--ATCGTAACCCTCGGTCT-GGTC-G
* * ** * * *
16273030 ATCTTAGATTGGGAATGAAGTTTGTATGCCTAAACCAACCGATGAAAGGAGCGG
828 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-CGA
* * * **
16273084 GCGGGCGGGCGGGTACAACGCCGGCCAAAGAGGCAGGATGCGCAAGTTGTGGATCGATAGGGTGG
1 GCGGGCGGGC----ACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*
16273149 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATT
62 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATT
* *
16273214 CATACAATGGTCCCTTAAGGCTTCATGAGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
127 CATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * **
16273279 ACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTAGAAAGG-GTGTTGGAAC
192 ACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAG-AAGGAGTTTTGGCCC
* * *
16273343 CAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGGATAAAAAAATTAAGCTAAAAACTC
256 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTC
* * *
16273408 GAAGTTTACAAGATTTTGTGACCATTTCAAAAAAGTGTCTCCATTTCAGACACTTTAATGGCTAC
320 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
16273473 TGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTCGAGGTTTGATGAG
385 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
*
16273538 GGATAGGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCATGTGCGC-ACACCCC
450 GGATA-GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACA--CC
* * * * *
16273602 CCCCGGCCCACCCGATCGCCGAAACCCCAATACCGCCGGTCAGGTTCTCCGACGATGGTGTCTCG
512 CCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCG
* * * * *
16273667 ACAAAGAAAAATGC-AGCACCAGCACATGCCTGAGCCCAGCATGTGCTGTCGCAACCCTCGATCG
576 ACGAAGAAAAATACGA-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCT
* * * * * * **
16273731 GGTCTGATCCTAGACTGGGAATGAACTCTGTATGCCTAGACTGAGAATAAACTTTGTATGCCTAA
640 GATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * ** * *
16273796 GTCAATCCACGGAACGAGCGTATGGACGCTCAGCCGG-CAGAGGGGTGGGATGCGCAAGCCCG-G
705 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG--CGAG
* ** * *
16273859 GATCGGCTGGGTCCCCCTCTACGGGCTGCTGATCCTGCTGCCGCAACCCTCAGTCTGGTCTGATC
768 GATCGGC-GGGTCCCCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTCTGGTC-GATC
** * * *
16273924 TTAGACTGTTAATGAACTTCGTATGCCTAAGCCAATCGACAAAACGA
831 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
16273971 GCGGGCGGGCAGGCGGGCAGGCGGGCACTACGCGATCCAGAGAGACGGGATGCGCAAGCCGTGGA
1 GCGGGCGGGCA--C---TA--C--G--C--CG-G--CCAGAGAGGCGGGATGCGCAAGCCGTGGA
16274036 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
50 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
*
16274101 GGCTTGTAAATTCATACAATGGTCCCTGAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
115 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
*
16274166 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTAGAAGG
180 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGG
* ** ** *
16274231 GGCGTTGGAACCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGGGC-AAAAAAATTC
245 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT--GCAAAAAAAATTC
* * * *
16274295 AGCTAAAAACTCAAAGTTTACAAGATTTTGTGACCATTTCAAAAAAGTGTCTCCATTTCAGACAC
308 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * **
16274360 TTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTTA
373 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
16274425 AGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
438 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * *
16274490 CG-TACACCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTTCGGCGAT
503 CGCGACACCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGAT
* * * * * * * * * * *
16274554 GGTTTCCTGGC-AAAAAAAAAATGCAGCACCAACAAATGCTCGAGCCCAGCATGTGATGTCGCAA
567 GGTGTCCCGACGAAGAAAAATACG-A-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* * *
16274618 CCCTTGATCT-AGTCTGATCTTAGACTGAGAATGAACTCCGTATGCTTAGACTGGGAATGAACTT
630 CCCTCGATCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * ** *
16274682 CGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGCTCAGCCAACAAGAGGGGCGGGATGC
694 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * * *
16274747 GCAAGCTGGGGATCGGTCGGGTCCCCTTCTACATGCTGCCGATCCTGCTATCGTAACCCTCGATC
759 GCAAGC-GAGGATCGG-CGGGTCCCCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTC
** *
16274812 TGGTCTGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACTGACGAAACGA
822 TGGTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
*
16274869 GCGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCTTGGATCGATAGG
1 --------GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* *
16274934 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATGGCTTGTA
58 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
* * * *
16274999 AATTCATATAATGGTCCCTTACGCCTTCATGTGAAGTTTCATGGCAGGACGACTCGTTTTTTATT
123 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
**
16275064 TTTCACGATTTTCAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
188 TTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
* *
16275129 CCCC-AACGTTGGTAGACGTGATCCTTGCATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAA
253 CCCCAAAC-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAA
16275193 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
316 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * *
16275258 CTACTCGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTAA
381 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
*
16275323 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTTCGC-ACAT
446 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACA-
* * * * *
16275387 CCCCCCAGCCCCCCTGATCGAT-GGAACCCAAAAGCCGCCGGTCAGGTTCTCCGGCGATGGTGTC
510 CCCCCCGGCCCCCC-GATCG-TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTC
* * * * *
16275451 CCAACGAAGAAAAATACGGCACTAGCACATGCCCGAGCGCAGCATGTGCTGCCACAA-CC-C--T
573 CCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGAT
*
16275512 -TG----G----T---CT-GG--T----T-CG-AT-CTTAGACTGGGAATGAATTCCGTATGCCT
638 CTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * *
16275555 AAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGTCGACCAGAGGGGTGGGATGCGTAAGCCTA
703 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CGA
* * * * *
16275620 GGATCGGCTAGGTCCCCCTCTACGTGCTGCTAATCCTGCTGTCGTTACCCTCGAT-TCGGTTCGA
767 GGATCGGC-GGGTCCCCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTCT-GG-TCGA
* * * * *
16275684 TCATACACTGGGAATGAACTTCGTATGCCTAAGCCAATCGACAAAACGA
829 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * * *
16275733 GCGGGCGGGTGGGCGGGCACTATGTCGACCAGAGAGGCGGGATGCGCAAGTCGTGGATCGATAGG
1 ----GC----GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* *
16275798 ATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGTTTGTA
58 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
*
16275863 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCTTGGCAAGACGACTCGTTTTCTATT
123 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * ***
16275928 TTTCACAATTTTTGAAACTTTTTACGGTTCAGGCTTTTTTTTTATTTTTTCAGAAGGAGTTTTGG
188 TTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGG
** *
16275993 CCCCAAACTTTTTAGACGTGATCCTTGTATTTTTGTTGGCATGGCCAAAAAAATTCAGCTAAAAA
253 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT-GCAAAAAAAATTCAGCTAAAAA
*
16276058 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGC
317 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * * *
16276123 TACTGGCAGCAAACCTATAAAATCTCAAAAGCTCTTTAAGGGCGTGTGAGTTCTCAAGGTTTGAT
382 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
16276188 GAGGGATGGGGGGCCAATATAAGGGCAAAGTACCAGCACCCATCGCACATCATGTGC-CCACACC
447 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACA-C
* * ** * * **
16276252 CCCCCGCCCCCCCGATCGCCGGAACCTTAATGTCGTCGGTCAGGTTCTTCGGTGATGGTGTCCCG
511 CCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCG
* * * * *
16276317 ACGAAGAAAAATACGGCACCAGCACATGCCCGAACCCAGCATGTGCTGTCGTAACCCTCGGTCTG
576 ACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTG
* * * * *
16276382 ATCCGATCTTAGACTTTGGAATGAACTCCTTATACTTATACTGGGAATGAACTCCGTATGCCTAA
641 ATCTGATCTTAGAC-TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
16276447 GTCAACCCACGAAACGAGTGTGCGGGTGCTCAGCTGGTC-GAGGGGCGGGATGAGCAAGCTGGGG
705 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC-GAGG
* ** * * ** ** *** *
16276511 ATCGGTCGGGTCCCCCTTTGTGTGCTACTGATCCTACTGCCACAACCCTTATTCCGGTTCGATCT
769 ATCGG-CGGGTCCCCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTCTGG-TCGATCT
* *
16276576 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGAAGAAACGA
832 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
16276622 GCGGGCGGGTGGGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGTAAGCCGTGGATCGATAAG
1 GCGGGC------G--GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * *** *
16276687 GTGGTAGGT-GGTTAGAGGCACATCTTCATATTTTTGTTGTGCCAATGCTATTTTTCTGGCTTGT
58 GTGGTAGGTGGGTT-TAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
*
16276751 AAATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
122 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * ** *
16276816 TTTTCATGATTTTTGAAACTTTTTACGATTCGGGATTTTTTAAAATTTTTTCATAAGGAGTTTTG
187 TTTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* *
16276881 GCCCCAAA-TTGGTAGACGTGATCCTTGTGTTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAA
252 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAA
*
16276945 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGG
316 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* *
16277010 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTTGAGGTTTGA
381 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
*
16277075 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATGATGTGCGC-ACA-
446 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACAC
* *
16277138 ----C--CCCCCCGATCGTCGGAACCCCAATGCCG-CTAGTCAGGTTCTCCGATGATGGTGTCCC
511 CCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATGGTGTCCC
* * * * * *
16277196 GATGAAGAAATATACGGCACCAGCACATGCCTGAG-CCAGCATGTGCCGCCGCAACCCTCGGT-T
575 GACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCT
* * * *
16277259 CGGTCCGATCATAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTA
640 -GATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
16277324 AGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGTCAGCCAGAGGGGCGAGATGCGCAAGCCG-G
704 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CGAG
* * *
16277388 GATCGACCGGGT-CCCC-CT-C-TGC-G-TG---CT--T-TCGTAACCCTCAGTCTGATCTGATC
768 GATCG-GCGGGTCCCCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTCTGGTC-GATC
*
16277441 TTAGACTGGGAATGAACACCGTATGCCTAAGCCAACCGACGAAACGA
831 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
16277488 GCGGGCGGGCAAGCGGGCACTACGCCGGTCAGAGAGCCGGGATGCGCAAGCAGTGGATCGATAGG
1 ----GC-GG---GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
* * *
16277553 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATAGCTTGTA
58 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
* * *
16277618 AATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAGACGACTTGTTTTCTATT
123 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
** * *
16277683 TTTCACGATTTTCAAAACTTTTTAGGGTTCCAGATTTTTTAAAATATTTTT-AGAAGGAGTTTT-
188 TTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAAT-TTTTTCAGAAGGAGTTTTG
* * * * * *
16277746 GCCCCAAACTTGGTAGCCGTGATCTTTCTATTTTTATTGGCATGCACAAAAATATTCTGCTAAAA
252 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAA
*
16277811 ACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCTAGACACTTTAATG
316 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATG
* *
16277875 GCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTG
380 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
16277940 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC-ACA
445 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACA
* ** * * * * *
16278004 CCACCCTGGCCCCCCCGATCACCGCAA-CCCTATAGTCGCCGGTCAGGTTCTCCAACGATGGTGT
510 CC-CCCCGG-CCCCCCGATCGTCGGAACCCCAAT-GCCGTCGGTCAGGTTCTCCGACGATGGTGT
** ** * * * *
16278068 CCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGTGCCTAGCATGTGCTGCCACAACCCTCGA
572 CCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGA
*
16278133 TC-CAGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
637 TCTGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGC
16278171 CTAAGCCAAC
Statistics
Matches: 6682, Mismatches: 756, Indels: 508
0.84 0.10 0.06
Matches are distributed among these distances:
834 61 0.01
835 3 0.00
836 3 0.00
839 1 0.00
842 2 0.00
845 2 0.00
850 2 0.00
851 2 0.00
853 1 0.00
854 2 0.00
855 5 0.00
856 9 0.00
857 72 0.01
858 3 0.00
859 184 0.03
860 457 0.07
861 5 0.00
862 4 0.00
863 262 0.04
864 879 0.13
865 74 0.01
866 603 0.09
867 15 0.00
868 4 0.00
869 3 0.00
870 4 0.00
871 5 0.00
872 3 0.00
873 1 0.00
874 13 0.00
875 71 0.01
876 59 0.01
877 6 0.00
878 95 0.01
879 198 0.03
880 648 0.10
881 83 0.01
882 1 0.00
883 2 0.00
884 441 0.07
885 85 0.01
886 74 0.01
887 19 0.00
888 241 0.04
889 409 0.06
890 552 0.08
891 148 0.02
892 69 0.01
893 2 0.00
894 1 0.00
895 8 0.00
896 57 0.01
897 133 0.02
898 170 0.03
899 412 0.06
901 2 0.00
904 1 0.00
906 11 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (877 bp):
GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
TGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
TTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC
TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAGTG
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGACACCCCCCGGCCC
CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAA
ATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCTGATCTGATCTT
AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCGAGGATCGGCGGGTCC
CCCTCTACGTGCTGCTGATCCTGCTATCGTAACCCTCGGTCTGGTCGATCTTAGACTGGGAATGA
ACTCCGTATGCCTAAGCCAACCGACGAAACGA
Found at i:16272042 original size:26 final size:26
Alignment explanation
Indices: 16272013--16272065 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16272003 CCGATCTGAT
16272013 CTTAGAC-TGAGAATGAACTCCGTATG
1 CTTAGACTTG-GAATGAACTCCGTATG
16272039 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTTGGAATGAACTCCGTATG
16272065 C
1 C
16272066 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTTGGAATGAACTCCGTATG
Found at i:16273768 original size:26 final size:26
Alignment explanation
Indices: 16273739--16273794 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
16273729 CGGGTCTGAT
* *
16273739 CCTAGACTGGGAATGAACTCTGTATG
1 CCTAGACTGAGAATAAACTCTGTATG
*
16273765 CCTAGACTGAGAATAAACTTTGTATG
1 CCTAGACTGAGAATAAACTCTGTATG
16273791 CCTA
1 CCTA
16273795 AGTCAATCCA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.20, G:0.21, T:0.29
Consensus pattern (26 bp):
CCTAGACTGAGAATAAACTCTGTATG
Found at i:16274675 original size:26 final size:26
Alignment explanation
Indices: 16274636--16274688 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16274626 CTAGTCTGAT
16274636 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
* *
16274662 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16274688 C
1 C
16274689 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:16277299 original size:26 final size:26
Alignment explanation
Indices: 16277270--16277320 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16277260 GGTCCGATCA
*
16277270 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTAGGAATGAACTCCGTATGCT
16277296 TAGACTAGGAATGAACTCCGTATGC
1 TAGACTAGGAATGAACTCCGTATGC
16277321 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.20, G:0.25, T:0.25
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCGTATGCT
Found at i:16278824 original size:704 final size:704
Alignment explanation
Indices: 16277434--16278866 Score: 2088
Period size: 704 Copynumber: 2.0 Consensus size: 704
16277424 CTCAGTCTGA
* *
16277434 TCTGATCTTAGACTGGGAATGAACACCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCA
1 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACA
* *
16277499 AGCGGGCACTACGCCGGTCAGAGAGCCGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGG
66 AGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGG
16277564 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAA
131 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAA
* *
16277629 CGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAGACGACTTGTTTTCTATTTTTCACGATTT
196 CGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTCCACGATTT
* * *
16277694 TCAAAACTTTTTAGGGTTCCAGATTTTTTAAAATATTTTTAGAAGGAGTTTTGCCCCAAACTTGG
261 TCAAAACTTTTTACGATTCCAGATTTTTTAAAATATTTTTAGAAGGAGTTTTGCCCCAAACTTGC
* * * *
16277759 TAGCCGTGATCTTTCTATTTTTATTGGCATGCACAAAAATATTCTGCTAAAAACTCAAAGTGTAC
326 TAGACGTGATCATTCTATTTTTATTGGCATGCAAAAAAATATTCAGCTAAAAACTCAAAGTGTAC
* *
16277824 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCTAGACACTTTAATGGCTACTGGCAGCAA
391 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCTAAACACTTTAATGGCTACTAGCAGCAA
* * *
16277889 ACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGG
456 ACCTGTAAAATCTCAAATACTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGG
*
16277954 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCTGGCCCCCC
521 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCCGGCCCCCC
* * **
16278019 CGATCACCGCAACCCTATAGTCGCCGGTCAGGTTCTCCAACGATGGTGTCCCGGTGAAGAAAAAT
586 CGATCACCGCAACCCAATAGCCGCCGGTCAGGTTCTCCAACGATGGTGTCCCGACGAAGAAAAAT
** * * * *
16278084 GTGGCACCAGCACATGCCCGTGCCTAGCATGTGCTGCCACAACCCTCGATCCAG
651 ACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCACAAACCTCGATCCAG
*
16278138 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACG
1 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACA
* * * *
16278203 GGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGG
66 AGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGG
* * * *
16278268 GTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGTTTGTAAATTCATACAA
131 GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAA
* * *
16278333 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTCCACGATTT
196 CGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTCCACGATTT
** *** * *
16278398 TTGAAACTTTTTACGATTTGTGATTTTTTTAAAT-TTTTTCAGAAGGAGTTTTGGCCCCAAATTT
261 TCAAAACTTTTTACGATTCCAGATTTTTTAAAATATTTTT-AGAAGGAGTTTT-GCCCCAAACTT
* * *
16278462 GCTAGACGTGATCCATT-TATTTTTGTTGGCATGCATAAAAAAT-TTCAGCTTAAAACTCGAAGT
324 GCTAGACGTGAT-CATTCTATTTTTATTGGCATGCA-AAAAAATATTCAGCTAAAAACTCAAAGT
*
16278525 -TAGAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT-TCAAACACTTTAATGGCTACTAGC
387 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCT-AAACACTTTAATGGCTACTAGC
* * *
16278588 AGCAAACGTGTAAAATCTCAAATGCTCTTTAAGTGAGTGTGAGTTCTCGAGGTTTGATGAGGGAT
451 AGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * *
16278653 AGAGGGCCAATATAAGGGCCAATTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCGGC
516 AGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCCGGC
** * * *** *
16278718 CACCCCCGATCGTCGGAACCCCAAT-GCCGTCGGTCAGGTTCTCCGGTGATGGTGTCCCGACGAT
581 C-CCCCCGATCACCGCAA-CCCAATAGCCGCCGGTCAGGTTCTCCAACGATGGTGTCCCGACGAA
* * * * * * * *
16278782 GAAAGATACGGCACCAGCACATTCTCGAGCCCAACA-GTGCTGCCGCAAACCTTGGTTCGG
644 GAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCACAAACCTCGATCCAG
16278842 TCTGATCTTAGACTGGGAATGAACT
1 TCTGATCTTAGACTGGGAATGAACT
16278867 TTGTATGCGT
Statistics
Matches: 648, Mismatches: 74, Indels: 14
0.88 0.10 0.02
Matches are distributed among these distances:
703 6 0.01
704 502 0.77
705 126 0.19
706 14 0.02
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (704 bp):
TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACA
AGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTATAGCTTGTAAATTCATACAA
CGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTCCACGATTT
TCAAAACTTTTTACGATTCCAGATTTTTTAAAATATTTTTAGAAGGAGTTTTGCCCCAAACTTGC
TAGACGTGATCATTCTATTTTTATTGGCATGCAAAAAAATATTCAGCTAAAAACTCAAAGTGTAC
AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCTAAACACTTTAATGGCTACTAGCAGCAA
ACCTGTAAAATCTCAAATACTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCCGGCCCCCC
CGATCACCGCAACCCAATAGCCGCCGGTCAGGTTCTCCAACGATGGTGTCCCGACGAAGAAAAAT
ACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCACAAACCTCGATCCAG
Found at i:16278898 original size:26 final size:26
Alignment explanation
Indices: 16278850--16278900 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16278840 GGTCTGATCT
**
16278850 TAGACTGGGAATGAACTTTGTATGCG
1 TAGACTGGGAATGAACTACGTATGCG
*
16278876 TAGATTGGGAATGAACTACGTATGC
1 TAGACTGGGAATGAACTACGTATGC
16278901 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.12, G:0.29, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTACGTATGCG
Found at i:16279778 original size:26 final size:26
Alignment explanation
Indices: 16279738--16279789 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
16279728 CCGATCCGAT
* *
16279738 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16279764 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16279790 ACTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16280680 original size:26 final size:26
Alignment explanation
Indices: 16280629--16280680 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
16280619 CCGATCCGAT
* * *
16280629 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGAAATGAACTCCATATG
*
16280655 CTTAGGCTGGAAATGAACTCCATATG
1 CTTAGACTGGAAATGAACTCCATATG
16280681 ACTAAGTCAA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCATATG
Found at i:16280777 original size:891 final size:891
Alignment explanation
Indices: 16278115--16282950 Score: 7095
Period size: 891 Copynumber: 5.5 Consensus size: 891
16278105 GCCTAGCATG
* ** **
16278115 TGCTGCCACAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *** * * *
16278180 CCGACGAAACGAGCGGGCGGACGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCG
66 CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
* *
16278245 TGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
* * * *
16278310 TTTTGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
* * ** * * *
16278375 TCGTTTTCTATTTTCCACGATTTTTGAAACTTTTTACGATTT-GTGATTTTTTTAAATTTTTTCA
261 TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGGTTTCG-GATTTTTTAAAATTTTTTTA
* * * * *
16278439 GAAGGAGTTTTGGCCCCAAATTTGCTAGACGTGATCCATT-TATTTTTGTTGGCATGCATAAAAA
325 GAAGGAGTTTTTGCCCCAAACTTGGTAGACATGATCC-TTGTATTTTTGTTGGCATGCACAAAAA
* * *
16278503 ATTTCAGCTTAAAACTCGAAGT-TAGAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * * *
16278567 AACACTTTAATGGCTACTAGCAGCAAACGTGTAAAATCTCAAATGCTCTTTAAGTGAGTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * * *
16278632 TCTCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAATTACCAGCACCCATTGCACATC
519 TCTCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATC
*
16278697 ATGTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
584 ATGTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCC
** * * * * * * *
16278762 GGTGATGGTGTCCC-GACGATGAAAGATACGGCACCAGCACATTCTCGAGCCCAACA-GTGCTGC
649 GACGATCGTGTCCCAG-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * * * * * * * *
16278825 CGCAAACCTTGGTTCGGTCTGATCTTAGACTGGGAATGAACTTTGTATGCGTAGATTGGGAATGA
713 CGCAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATGA
* * * * * *
16278890 ACTACGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTCAGCCAGCTAGAGGGGCGGG
778 ACTCCGTATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCAACCAGAGGGGCGGG
* * * **
16278955 ATGCGCAAGCC-AGGGATCGACTGGGTCCCCCTCTACGTGCTATTGATCC
843 ATGTGCAAGCCGA-GGATCGACCGAGTCCCCCTCTACGTGCTACCGATCC
* ** *** *
16279004 TGCTGTCGTAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
1 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *** * *
16279069 CCGACGAAACGAGCGTGCGGGCGGGCGGGCACTACACCGGCCAGAGAGGCGGGATGCGCAAGCAG
66 CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
* * *
16279134 TGGATTGATAGGGTGGTAGGTGGTTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCTTTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
* *
16279199 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCTAGACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
* * * *
16279264 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGG-TTCGGGATTTTTTTAAATATTTTTA
261 TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGGTTTC-GGATTTTTTAAAATTTTTTTA
* ** * *
16279328 GAAGGATTTTTTGATCCAAACTTGGTAGACGTGATCCTTCTATTTTTGTTGGCATGCACAAAAAA
325 GAAGGAGTTTTTGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
16279393 ATTCAGCTAAAAAGTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
390 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
16279458 ACATTTTAATTGCTAC-GGCAGCAAACCTGTAAAATCTCTAATGCTCTTTAAGGGGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16279522 CTCGAGGATTGATGAGTGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCA
520 CTCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCA
16279587 TGTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCG
585 TGTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCG
*
16279652 ACGATCGTGTCCCAGCGAAGAAAAATGCGGCACCATCACATGCCCGAGCCCAGCATGTGCTGCCG
650 ACGATCGTGTCCCAGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
*
16279717 CAACCCTCAATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATGAAC
715 CAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATGAAC
16279782 TCCGTATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCAACCAGAGGGGCGGGAT
780 TCCGTATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCAACCAGAGGGGCGGGAT
16279847 GTGCAAGCCGAGGATCGACCGAGTCCCCCTCTACGTGCTACCGATCC
845 GTGCAAGCCGAGGATCGACCGAGTCCCCCTCTACGTGCTACCGATCC
16279894 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
16279959 CCGACGAAACGAGCGAGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
66 CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
*
16280024 TGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCCGTGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
*
16280089 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCATGTGAAGTTTCATGGCAACACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
*
16280154 TCGTTTTCTATTTTTCACAATGTTCAAAACTTTTTACGGTTTCGGATTTTTTAAAATTTTTTTAG
261 TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGGTTTCGGATTTTTTAAAATTTTTTTAG
** *
16280219 AAGGAGTTTTTGCCCCAAACTTGGTAGACACAATCCTTGTATTTTTGTTGGCATGCATAAAAAAA
326 AAGGAGTTTTTGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16280284 TTCAGCTAGAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
391 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
16280349 CACTTTAATGGCTACTGGCCGCAAACCTGTAAAATCTCAAAAGCTCTTTAAGGGGGTTTGAGGTC
456 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
16280414 TCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCAT
521 TCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCAT
16280479 GTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGA
586 GTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGA
16280544 CGATCGTGTCCCAGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
651 CGATCGTGTCCCAGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* *
16280609 AACCCTCAATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGGCTGGAAATGAACT
716 AACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATGAACT
* *
16280674 CCATATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCAACCAGAGGGGTGGGATG
781 CCGTATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCAACCAGAGGGGCGGGATG
*
16280739 TGCAAGCCGAGGATCGACCGAGTCCCCCTCTGCGTGCTACCGATCC
846 TGCAAGCCGAGGATCGACCGAGTCCCCCTCTACGTGCTACCGATCC
16280785 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
16280850 CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
66 CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
*
16280915 TGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCCGTGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
*
16280980 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCATGTGAAGTTTCATGGCAACACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
*
16281045 TCGTTTTCTATTTTTCACAATGTTCAAAACTTTTTACGGTTTCGGATTTTTTAAAATTTTTTTAG
261 TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGGTTTCGGATTTTTTAAAATTTTTTTAG
* ** *
16281110 AAGGATTTTTTGCCCCAAACTTGGTAGACACAATCCTTGTATTTTTGTTGGCATGCATAAAAAAA
326 AAGGAGTTTTTGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16281175 TTCAGCTAGAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
391 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16281240 CACTTTAATGGCTACTGGCCGCAAACCTGTAAAATCTCAAAAGCTCTTTAAGGGGGTGTGAGTTC
456 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16281305 TCGAGGTTTGATGAGCGATAGGGGGCCATTATAAGGGCCAAGTACCAGCACCCATCACACATCAT
521 TCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCAT
* ** * * * *
16281370 GTGCGCACA--CCCCCAGCC-CCCCCGATCACCGAAACCCCAATGCCGCCGATCAGGTTCTCCGA
586 GTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGA
16281432 CGA-----T------G--G-----T---------G----T-CCCGAGCCCAGCATGTGCTGCCGC
651 CGATCGTGTCCCAGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * * *
16281465 AACCCTCGGTCTGATCCGATCCTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
716 AACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATGAACT
* * * * * * * * * *
16281530 CTGTATGCCTAAGTCAACCCA-CAAAGCGAGCGTACGGACGCTCAACCGACCACAGGGGTGGGAT
781 CCGTATGACTAAGTCAACCCATGAAA-CGAACGTGCGGGCGCTCAGCCAACCAGAGGGGCGGGAT
* *
16281594 GTGCAAGCCGAGGATCGACCGGGTCCCCTTCTACGTGCTACCGATCC
845 GTGCAAGCCGAGGATCGACCGAGTCCCCCTCTACGTGCTACCGATCC
* ** *
16281641 TACTGCCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAA
1 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *** * * * *
16281706 CTGACGAAACGAGAGGGCGGACGGGCGGGCATTACGTCGGCCAGAGAAGCGGGATGCGCAAGCCG
66 CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
* * *
16281771 TGGATCGATAGGGTGGTAGGAGGGTTTAGGCACATCTTCATATTTCTACTGTGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
* * * * * *
16281836 TTTTGGCTTGTAAATTCATACAATTGTCCCTCAACCCTTCATGTGAAGTTTCATGGCAAGAAGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
* ** * ** * * *
16281901 TCATTTTCTATTTTTCTTGATTTTTGAAACTTTTTACGATTTAGGATTTTTAAAAATTTTTTTAG
261 TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGGTTTCGGATTTTTTAAAATTTTTTTAG
* * * * *
16281966 GAGGAGTTTTGGCCCCAAACTTGGTAGGCATGATCCTTGTATTTTTGTTGGCATGGACAAAAACA
326 AAGGAGTTTTTGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* **
16282031 TTCAGATAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAGTGTGTCCCCATTTCAGA
391 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16282096 CACTTTAATGGTTACTGGCAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
456 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * * *
16282161 TCGAGGATTGATGAGGGATAGGGGGCGAATATAAGGGCCAAGTACCAGCACCGATTGCAAATCAT
521 TCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCAT
16282226 GTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGA
586 GTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGA
* *
16282291 CGATCGTGTCCCAGCGAAGAAAAATGCCGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGC
651 CGATCGTGTCCCAGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* *
16282356 AACCCTCGATCTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATAAACT
716 AACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATGAACT
* * * *
16282421 CCATATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGTCGACCAGAGGGGCGGGATA
781 CCGTATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCAACCAGAGGGGCGGGATG
* * * * * * *
16282486 CGTAAGTCAAGGATCGATCGAGTCCCCCTCTGCGTGCTCCCGATCC
846 TGCAAGCCGAGGATCGACCGAGTCCCCCTCTACGTGCTACCGATCC
*
16282532 TACTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
16282597 CTGACGAAATGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGGGGCGGGATGCGCAAGTGG
66 CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
16282662 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
*
16282727 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
*
16282792 TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGG-TTCGAGATTTTTTAAAATTTTTTCA
261 TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGGTTTCG-GATTTTTTAAAATTTTTTTA
* * ** *
16282856 GAAGAAGTTTTAT--CCCAAACCTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAC
325 GAAGGAGTTTT-TGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAA
16282919 AATTCAGCTAAAAAC-CTGAAGTGTACAAGATT
389 AATTCAGCTAAAAACTC-GAAGTGTACAAGATT
16282951 CCTGCCATGC
Statistics
Matches: 3587, Mismatches: 311, Indels: 97
0.90 0.08 0.02
Matches are distributed among these distances:
855 3 0.00
856 709 0.20
857 1 0.00
858 8 0.00
859 41 0.01
861 1 0.00
864 1 0.00
870 2 0.00
872 1 0.00
875 1 0.00
877 2 0.00
883 1 0.00
886 1 0.00
888 45 0.01
889 581 0.16
890 722 0.20
891 1464 0.41
892 3 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (891 bp):
TGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCCAACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCGG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACGAC
TCGTTTTCTATTTTTCACGATGTTCAAAACTTTTTACGGTTTCGGATTTTTTAAAATTTTTTTAG
AAGGAGTTTTTGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATCGCACATCAT
GTGCGCACACCCCCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGA
CGATCGTGTCCCAGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
AACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGAAATGAACT
CCGTATGACTAAGTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCAACCAGAGGGGCGGGATG
TGCAAGCCGAGGATCGACCGAGTCCCCCTCTACGTGCTACCGATCC
Found at i:16281516 original size:26 final size:26
Alignment explanation
Indices: 16281487--16281537 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16281477 GATCCGATCC
16281487 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
*
16281513 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16281538 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.27, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:16282427 original size:26 final size:26
Alignment explanation
Indices: 16282376--16282427 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
16282366 CTGATCCGAT
* * * *
16282376 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGAAATAAACTCCATATG
16282402 CTTAGACTGGAAATAAACTCCATATG
1 CTTAGACTGGAAATAAACTCCATATG
16282428 ACTAAGTCAA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.33, C:0.17, G:0.21, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGAAATAAACTCCATATG
Found at i:16283534 original size:26 final size:26
Alignment explanation
Indices: 16283505--16283555 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16283495 GGTCTGATCC
16283505 TAGACTGCGAA-AGAACTCCGTATGCT
1 TAGACTGCGAATA-AACTCCGTATGCT
*
16283531 TAGACTGGGAATAAACTCCGTATGC
1 TAGACTGCGAATAAACTCCGTATGC
16283556 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
26 22 0.96
27 1 0.04
ACGTcount: A:0.31, C:0.22, G:0.24, T:0.24
Consensus pattern (26 bp):
TAGACTGCGAATAAACTCCGTATGCT
Found at i:16284422 original size:26 final size:26
Alignment explanation
Indices: 16284393--16284445 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16284383 CCGGTCCGAT
*
16284393 CTTAGACTGGAAATGGACTCCGCATG
1 CTTAGACTGGAAATGAACTCCGCATG
* *
16284419 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGCATG
16284445 C
1 C
16284446 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGCATG
Found at i:16287967 original size:26 final size:26
Alignment explanation
Indices: 16287928--16287980 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16287918 CCGGTCCGAT
* *
16287928 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGAGAATAAACTTCGTATG
16287954 CTTAGACTGAGAATAAACTTCGTATG
1 CTTAGACTGAGAATAAACTTCGTATG
16287980 C
1 C
16287981 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.17, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATAAACTTCGTATG
Found at i:16288853 original size:26 final size:26
Alignment explanation
Indices: 16288817--16288869 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16288807 CCAGTCTGAC
*
16288817 CTTAGAGTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16288843 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16288869 C
1 C
16288870 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16288952 original size:889 final size:890
Alignment explanation
Indices: 16282952--16290618 Score: 10287
Period size: 888 Copynumber: 8.7 Consensus size: 890
16282942 TACAAGATTC
* *
16282952 CTGCCATGCCAATGCCATTTTTCTAGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
** *
16283017 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTAAAACTTTTTACGGTTCGAG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * * * * *
16283082 ATTTTTTTAAATTTTTTCAGACGGACTTTCGACCCCAAACTTGGTAGACGTGATCGTTGTATTTT
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
16283147 TGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
196 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
16283212 AAAAGTATCCCCA-TTCTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
261 AAAAGTATCCCCATTTC-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
16283276 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
325 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * **
16283341 TCAGCACCCATCGCACATAATGTGCGCACA-CCCCCCGGCCCCCCTGATCGTATGAA--CC---G
390 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * *
16283400 T---CGATCAGGTTCTCCGGGTGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCCC
455 TCGCCGGTCAGGTTCTCC-GGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* * * * * *
16283462 GAGCCCAGCATGTGCTGAT-GCAAGCCTCGATCCGGTCTGATCCTAGACTGCGAAAGAACTCCGT
519 GAGCCCAGCATGTGCTG-TCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
* * * *
16283526 ATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTC
583 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTC
* * * * * *
16283591 AGTCGGCCAGAGGGGCGGGATGAGCAAGTCGGGGATCGATCC-GCTCCTCCTC-GACGTGCTACC
648 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTG-CGTGCTGCC
* * * * * ** * * * *
16283654 GATCCTGCTGCCACAACCCTTGGTGCAATTTGATCTTAGAATGGGAATGAAGTCTGTATGCCTAA
711 GATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * ** * * * * *
16283719 GCCAACCGACGAAACGAGTGGGCAAGCGGGCGAGCACTATGTCAGCCATAAAGGCGGGATGCGCA
776 GCCAACCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCA
* *
16283784 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTT
841 AGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* ** *
16283834 CTGCCATGCTAATGCCATTTTTCTCACTTGTAAATTCATACAATGGTCCCTTAACCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * * *
16283899 AAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAAATTTTTACGATTCGAG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* ** * *
16283964 ATTTTTTAAAATTTTTTTAGAAATATTTTTGGCCCCAAACTTGGTATACGTGATCCTTGTATTTT
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
16284029 TGTAGACCAT-CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
196 TGTTG-GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
16284093 AAAATGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
260 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
16284158 TCTTTAAGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCATGTA
325 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
16284223 CCAGAACCCATCGCACATCATGCGCGCACACCCCCCCGACCCCCCCAATTGTCGAAACCCCAATG
390 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * * * *
16284288 TCGTCGGTCAGGTTCTCCGGCAATGGTGTCCCGATGAAGAAAAATGCGGCACCAGTACATGCCCT
455 TCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * *
16284353 AGCCCAGCATGTGCTGTCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGAAATGGACTCCGCAT
520 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
**
16284418 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCATTCAG
585 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAG
* * * * * *
16284483 CCGACCAGAGGGGCAGGATGCGTAAGCCGGGGATCGATCGGGTCCCCCTCTGTGTGCTACCGATC
650 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATC
* * *
16284548 CTACTATCGCAACCCTC-AGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
715 CTGCTACCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
16284612 AACCGACGAAACTAGCGGGCAGGCGGGCGGGCACTATGCCGGCCAGAGAGGCGGGATGCGCAAAC
779 AACCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
*
16284677 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
844 CGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
** * *
16284724 CTGCTGTGCCAATGCCATTTTTCTGGGTTGTAAATCCATACAATGGTCCCTTAAGCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * * * *
16284789 AAGTTTCGTGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTATGATTCGGG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * *
16284854 ATTTTTTAAAATTTTTTCAGAAGGAATTTTGGCCCCAAACTTGGTAGATGTCATCCTTGTATTTT
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
16284919 TGTTGGCATGCACAAAACAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTAAGCATTTGAA
196 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
16284984 AAAAGTATCCCCATTTCAGACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATGTCAAATGCT
261 AAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
16285049 CTTTAAGAGGGTGTGAGTTCTCGAGG-TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
326 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * ***
16285113 CAGCACCCATCACACATCATGTGCACACACCCCCCCCGGCCGCCTTAATCGTCGGAACCCCAATG
391 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
** * * * *
16285178 TCATCGATCAGGTTCTCCGACGATTGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
455 TCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * *
16285243 ATCGCAGCATGTGCTGTCGTAACCCT---T---G---G-TC-----C---G---G---TCCG-AT
520 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
16285283 -CCTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCCCGAAACAAGCGTGCAGGTGCAT-A
585 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGC-TCA
* * * * * * *
16285346 ACCGACCAGGGGGGCCGGATGCGCAAGTCGGGGATCGATCGGGTCCCCCTCTGCGTGTTGCCGAT
649 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * ** * * ** * *
16285411 CCTACTGCTGCAA-CCTTTAGTCTGATCCCATCTTAGACTAGGAATGAACTCTGTATGCCTAAGC
714 CCTGCTACCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* ** * * *
16285475 CAACCGATGAAATGAGAAGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGTAAG
778 CAACCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAG
*
16285540 CCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTT
843 CCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* ** *
16285588 CTACTGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
*
16285653 AAGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * *
16285718 ATTTTATAAAA-TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGATAGACGTGATCCTTGTATTTC
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
16285782 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
196 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
16285847 AAAAGTATCCCCATTTCAGACACTTTAATGGCTGCTGGTAGCAAACCTGTAAAATCTCAAATGCT
261 AAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
16285912 CTTTAAGGGGGTGAGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAATTAC
326 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * *
16285977 CAGCACCCATCGCACATCATATGCACCCACCCCCCCGGCCCCCCCGATCG-CTGGAACCCTAATG
391 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATG
* * * * * * * * * *
16286041 CCGTCGATCAGGTTCTCTGGCGATGGTGTCTCGGCAAAGAAAAATACAGCACCAGCACATGCTCG
455 TCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * *
16286106 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAAAATGGGAATGAACTCCATAT
520 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
16286171 GCTTTGATTGGAAATGAAATCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGCCGCTCA
585 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGG-CGCTCA
* * * * * * * * **
16286235 GCCGGCCATAAGGGCAGGATGCGCAAGCTGGGGGTC-AGTCGGGTCCCACTCTACGTGCTGTTGA
649 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGCGTGCTGCCGA
* * * * * *
16286299 TCCTGCTGCCGTAACCCTTGGTCCGGTCTGATCTTCGACTGGGAATGAACTCCGTATGGCTAAGC
713 TCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
16286364 CAACCAATGAAACGAGCGAGCGGTAAGGCGGGCGGGCACTACG-CTGGCCAGAGAGACGGGATGT
778 CAACCGATGAAACGAGCGGGC-G---GGCGGGCGGGCACTACGTC-GGCCAGAGAGGCGGGATGC
* *
16286428 GCAAGCCGTTGATCAATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTT
838 GCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*
16286481 CTGCCATGCCAATGCCATATTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* *
16286546 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACTGTTTGGG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* **
16286611 ATTTTATAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTTTTAGACGTGATCCTTGTATTTT
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
16286676 TGTTGGCATGCACAAAAAAATTCAGATAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
196 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
16286741 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCT
261 AAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * * *
16286806 CTTTAAGGGGGTGAGAGTTCTCGAGGTTTGATGAGAGATAAGGGGCCAATATAAGGGCCAATTAC
326 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * * *
16286871 CAGCACCCATCGCACATCATGTGTGCCCACCCCGCCGGGCCCCCCGATCG-CTGGAACCCTAATG
391 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATG
* * * * * * *
16286935 TCGCCGATCAGGTTCTCTGGCGATGGTGTCTCGGCAAAGAAAAATGCAGCACCAGCACATGCTCG
455 TCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * *
16287000 AGCCCAGCATGTGCTGTCGCAAGCCTCGGTCCGGTCCGATCTTAGAATGGGAATGAACTCCATAT
520 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * * ** *
16287065 GCTTTGATTGGGAATGAATTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAG
585 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAG
** * * * * * **
16287130 TTGGCCAAAGGGGCGGGTTACGCAAACCGGGGATCGACCGGGTCCCCTTCTGCGTGCTATCGATC
650 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * *
16287195 CTGCTACCGTAACCCTAGGTCTGGTCTGATCTTATACTGTGAATGAACTCCGTATGCCTAAGCCA
715 CTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
16287260 ACCGATGAAATGAGCGGGCGGGCGGGCAGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
780 ACCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
16287325 GTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
845 GTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * * *
16287371 CTGCCATGCCAATGCAATTTTTTTGGCTTGTAAATTCAAACAGTGGTCCCTTAAGCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * * * *
16287436 AAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTTATGATTTTTGAAACTTTTTACGGTTTGGG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* *
16287501 ATTTTTTTAAATTTTTTCAGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
** * *
16287566 T-TTTCCATGCAAAAAAAAAATTGAGCTAAAAACTCGAAGTG-ACAAGATTTTGTGACCATTTGA
196 TGTTGGCATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
16287629 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGC
260 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
16287694 TCTTTAAGGGGGTGTGAGCTCTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTA
325 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* ** *
16287759 CCAGCACCCATCGCACATCATGTGTGCGTA-CCCCCCGGCCCCCCTGATCGTCGGAACCCCAATG
390 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG
* * * * *
16287823 CCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGATGAAGAAAAATGCAGTACCAGCACATGCTCG
455 TCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * *
16287888 AGTCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTAT
520 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * * * *
16287953 GCTTAGACTGAGAATAAACTTCGTATGCCTAAGTTAACCCACGAAACGAGCGTACAGGCGCTCAG
585 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAG
* * ** * * * *
16288018 CCAGCCAAAGGGTTGGGACGCACAAGCCGGGGATCGACGGGGTCCCCCTCTGCTTGCTGCCGATC
650 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATC
* ** *
16288083 CTGCTACTGCAACCCTCGATGTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
715 CTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
16288148 ACCGATGAAATGAGCGGGCGGGCTGGCAGGCACTACATCGGTCAGAGAGGCGGGATACGTAAGCA
780 ACCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * *
16288213 GTGTATCGATAGGGTGGTAGGTGCGTTTAGGCACATCTCCATATTT
845 GTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* ** **
16288259 TTGCTGTGCCAATGCTGTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * *
16288324 AAGTTTCATGGCACGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * *
16288389 ATTTTTTAAAATTTTTTCAGAAGGAATTTTGGCCCCAAACTTAGTAGACGTGATCCTTATATTTT
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
16288454 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTGAA
196 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
** * *
16288519 AAAAGCGTCCCCATTTCAGACACTTTAACGGCTACTGGCTGCAAACCTGTAAAATCTCAAATGCT
261 AAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
16288584 CTTTAAGGGGGTGTGAGTTCTCGAGGTGTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
326 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * ** *
16288649 CAGCACCCATCACACATCATGTGCGCACA-GCCCCTGGCCCCCCCGATCACCGGAACCCTAATGT
391 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGT
* * * * *
16288713 CGCCGGTCAAGTTCTCCAGCGATGGTGTCTCGGA-GAAGAAAAATGTGGCACCAGCACATGCCCA
456 CGCCGGTCAGGTTCTCCGGCGATGGTGTC-CCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * * *
16288777 AGCCCGGCATGTGCTGTCGCAACCCTCGGCCCAGTCTGACCTTAGAGTGGGAATGAACTCCGTAT
520 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * *
16288842 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCATGCGGGCGCTCAG
585 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAG
* * * * *
16288907 TCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCAACCGGGTCCCCCTCCGCATGCTGCCGATC
650 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * * *
16288972 CTACTACCGTAACCCTCGGTCCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAGGCGA
715 CTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
16289037 ACCGACGAAACGAGCGGGCGGGTGGACGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
780 ACCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
16289102 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCTCATCTTCATATTT
845 GTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * *
16289148 -TCGCCATGCCAATGCCATTTTTCTGACTTGTAAATTCATAAAATGGTCCCTGAAGCCTTCATGT
1 CT-GCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * * * * *
16289212 CAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTACGATTTTCAAAACTTTTTGCGATTCGA
65 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGG
* *
16289277 GATATTTTAAAA-TTTTTCAGAGGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
130 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* **
16289341 TTGTTGGCATGCATAAAACGATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
195 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
16289406 AAAAAATGTCCGCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
260 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
16289471 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTT-ATTGAGGGATAGGGGGCCAATGTAAGGGCCAAGT
325 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA-TGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
16289535 ACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAATCCCAAT
389 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAAT
* * * *
16289600 GTCGTCGGTCAGGTTCTCTGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCC
454 GTCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* ** * * *
16289665 GAGCCTAGCATGTGCTACCGCAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTTCGTA
519 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
16289730 TGCTTAGACTGGAAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCATACAGGCGCTTA
584 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCA
* * * * * * * *
16289795 ACCGGCCAAAGGAGTGGGATGCACAAGCCGAGGATCGACAGGGTCCCCCTCTGCATGCTGCCGAT
649 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * *
16289860 CCTGCTGCCGTAACCTTCGATCCGGTCCGATCTTAGACTGGGAATGAA-TCCGTCTGCCTAAACC
714 CCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* ** * * * *
16289924 AACCGATGAAACGAGTGGGTAGGCAGACGGGCACTACGTCGGCCAGAGAGGCGGGATACGTAAGC
779 AACCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
* *
16289989 CGTGGATCAATAGGGTAGTAGGTGCGTTTAGGCACATCTTCATATTT
844 CGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * * *
16290036 TTGCCGTGCAAATGCTATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
1 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* *
16290101 AAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTT-GGG
66 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
16290165 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
131 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* ** * *
16290230 TGTTGGCATGCATAAAACGATTCAGCTAAAAACTTGAAGCGTACAAGATTTTGTGACCATTTGAA
196 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
** *
16290295 AAAAGTATCCATATTTCAGACACTTTAATGGTTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
261 AAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
16290360 CTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
326 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* *
16290425 CAGCAACCATCGCACATCATGTGCGCACACACCCCCGGCCCCCCCGATCGTCGGAACCCCAATG-
391 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGT
** * ** *
16290489 CTGCCGGGGAGGTTCTCCGAC-ATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCA
456 C-GCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * *
16290553 AGCCCAGCATGTGCTGCCAG-AACCCTCGGTCCGTTCTGACCTTAGACTGGGAATG-ACTCCATA
520 AGCCCAGCATGTGCTGTC-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
16290616 TGC
584 TGC
16290619 ATGCCAGGGA
Statistics
Matches: 6017, Mismatches: 694, Indels: 144
0.88 0.10 0.02
Matches are distributed among these distances:
862 1 0.00
863 304 0.05
864 455 0.08
865 3 0.00
866 5 0.00
869 2 0.00
872 1 0.00
873 2 0.00
875 1 0.00
880 2 0.00
881 2 0.00
882 380 0.06
883 25 0.00
884 2 0.00
885 2 0.00
886 9 0.00
887 103 0.02
888 1413 0.23
889 1387 0.23
890 1079 0.18
891 15 0.00
892 1 0.00
893 218 0.04
894 602 0.10
895 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
AAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGT
CGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
GCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
Found at i:16289746 original size:26 final size:26
Alignment explanation
Indices: 16289706--16289758 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16289696 CCGGTCCAAT
16289706 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
16289732 CTTAGACT-GGAAATGAACTTCGTATG
1 CTTAGACTAGG-AATGAACTTCGTATG
16289758 C
1 C
16289759 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 2 0.08
26 24 0.92
ACGTcount: A:0.30, C:0.17, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTTCGTATG
Found at i:16292206 original size:26 final size:26
Alignment explanation
Indices: 16292155--16292207 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16292145 CCGGTCCAAT
*
16292155 CTTAGACTGGGAATGAACTGCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16292181 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16292207 C
1 C
16292208 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16293936 original size:26 final size:26
Alignment explanation
Indices: 16293907--16293959 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16293897 CCGGTCCAAT
16293907 CTTAGACTGGGAATGAAC-TCCGTATG
1 CTTAGACTGGGAATGAACAT-CGTATG
16293933 CTTAGACTGGGAATGAACATCGTATG
1 CTTAGACTGGGAATGAACATCGTATG
16293959 C
1 C
16293960 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACATCGTATG
Found at i:16294817 original size:26 final size:26
Alignment explanation
Indices: 16294788--16294840 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16294778 CTGGTTCAAT
*
16294788 CTTATACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16294814 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16294840 C
1 C
16294841 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16295007 original size:881 final size:881
Alignment explanation
Indices: 16291291--16296790 Score: 6848
Period size: 881 Copynumber: 6.2 Consensus size: 881
16291281 CTAGTCCGAT
* * *
16291291 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGGGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** * * *
16291356 CGGCCAGAGGGGCGAGACGCGCAAGTCGGGGATCGATCGGGTCCCCCTCTACATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * * * ** *
16291421 TGTTGCCGTATCCCTTGGTCC-GATCCAACGTTAGGTTGGGAATGAACTCCGTATCCCTAAGCCA
131 TGCTGCCGCAACCCTCGATCCAGTTCGATC-TTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * * *
16291485 ACCGACGAAATGAATGGGCGGGCGGGCGGGCACTATGCCGGTCAGGGAGGCGGGATGCGCAAGCT
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
16291550 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
16291615 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * ** *
16291680 CTCGTTTTATATTTTGCATGATTTTTGAATCTTTTTACGGTTCTAGATTTTTTAAAATTCTTTCA
389 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* *
16291745 GATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTGTTGGCATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
16291810 ATTAAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAA-TGTCCCCATTTTA
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA-AAAAGTGTCCCCATTTCA
* * *
16291874 GACACTTTAATAGCTGCTGGCAGCAAACCTGTAAAATATCAAATGCT-TTTCAAGGGGGTGTGAG
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAG
*
16291938 TTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTA-CACCCATCGCACA
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC-AGCACCCATCGCACA
*
16292002 TCATGTGCGCATACCACCCCTGGCCCCCCGATCGTCGGAAA-CCCAATGCCG-CTGGTCAGGTTC
711 TCATGTGCGC--A-CA--CC---CCCCCCGATCGAC-GAAACCCCAATGCCGTC-GGTCAGGTTC
** * *
16292065 TCCGGTGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCTAGCATGTGCT
766 TCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * *
16292130 GCCGCAATCGTC-AGTCCGGTCCAATCTTAGACTGGGAATGAACTGCATATG
831 GCCGCAACCCTCGA-TCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
*
16292181 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * **
16292246 CGGCCAGAGGGGCGAGATGCGTAAGCCGGGGATCGACCAGGTCCCCCT-TGCGTGCTGCTAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * * * *
16292310 TGCTGGTGCATCCCTTGGTCCGGTCCAATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
16292375 CCCACGAAACGAGCAGGCGGGCGGACGGGCACTACGCCGGCCAGAGAGGCGGAATGCGAAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
16292440 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
16292505 TTTGGCTTGTAAATTCATAC-ATGGT-CCTTAAG-CTTCATGTGAAGTTTCAT-GCAAGATGACT
326 TTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* *
16292566 CGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
391 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
* * * *
16292631 AGGAGTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTTGACATGCACAAAAAAA
456 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAA
* *
16292696 TTCAGCTAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
16292761 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * * *
16292826 TCAAGGTTTGATGAAGGATAGGGGGCCAATATTAGGGCCAAGTACCAGCAACCGTCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
*
16292891 -TGGCGCACACCCCCCCCGCCCCCTCCGATCGTCAGAACCCCAATGCCGTCGGTCA-GTTACTCC
715 GT-GCGCACACCCCCCCCG----AT-CGA-CG--A-AACCCCAATGCCGTCGGTCAGGTT-CTCC
** * * * * * * *
16292954 GGTGATGGCAG-GCCGACGAAGAAAAA-AGTGGCACCAGCACATCCCCAAGCCCAGCATGTACTA
769 GACGATGG-TGTCCCGACGAAGAAAAATA-CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
*
16293017 CCGTAA-CC-C--T-CGG--------T---CT-GG--T---CT--G-AT-
832 CCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
* * ***
16293041 CTTAGACTGGGAATGAACTCCGTAT-CCTTAAGTCAACCGATGAAACGAGCGTATAGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCC-TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * ** * *
16293105 TCGGCCAGACGGGCGGCATGCGCAAGCTGCGGATTAGCCGGGTACCCCTCTGCGTGTTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * ** *
16293170 CTACTACCACAACCCTCTATCCAG-TCTGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCT
130 CTGCTGCCGCAACCCTCGATCCAGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * **
16293234 AACCGACGAAACGAGCGGGCGGGCAAGCGGGCACTACGCTGGCCAGAGATACGGGATGCGCAAGC
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
16293299 CGTGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATA-TTCTGTCATGACAATCGCCA
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT-GCCA
* *
16293363 TTTTTTGGCTCGTCAAATTCATAC-ATGGTCCCCTTAAGCCTTCATTGGTGAAGTTTCTTGGC-A
323 TTTTTTGGCTTGT-AAATTCATACAATGGT-CCCTTAAGCCTTCA-T-GTGAAGTTTCATGGCAA
* * * **
16293426 GAC--C-CATTTT-TATTTTTCCCGTGGATTTTTAAAAACTTTTTACAATTCGGGATTTTTTAAA
384 GACGACTCGTTTTCTATTTTT--CAT-GATTTTT-GAAACTTTTTACGGTTCGGGATTTTTTAAA
* *
16293487 ATTTTTTCAGAAGGGGTTTTGGCCCCTAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
445 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * *
16293552 CATAAAAAATTTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
510 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
16293617 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCCGTAAAATCTCAAATGCTCTTTAAGGGG
575 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * * *
16293682 GTATGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCTATATTAGGGCCCAGTACCAGCACCCAT
640 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
16293747 CGCACATCAT-TGGCGCACACCCCCCCGCCCCCCTCCGATCGTCGGAACCCAAATGCCGTCGGTC
705 CGCACATCATGT-GCGCACA--------CCCCCC-CCGATCGACGAAACCCCAATGCCGTCGGTC
* *
16293811 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGACACTAGCACATGCCCGAGCCCAGCA
760 AGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* *
16293876 TGTGCTACCACAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
825 TGTGCTGCCGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
* * *
16293933 CTTAGACTGGGAATGAACAT-CGTATGCCTAAGTCAACTCATGAAACGAGCGTGCGAGCGCTCAG
1 CTTAGACTGGGAATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
16293997 CCGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
** * * ** *
16294062 CTGCTATCGCAACCCTC-ATTTCGGTTCGATCTTAGACTCAGAATGGACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGA-TCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
16294126 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTAAGTCGACCAGATAGACGGGATGCGCAAGC
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
**
16294191 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGAAAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
16294256 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* **
16294321 ACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTTAAAA-TTTTT
388 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTT
* **
16294385 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGTGCAAAA
452 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
16294450 ACATTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
16294515 AGACACTTTAATTGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTCTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
16294580 TTGTTGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** *
16294645 CATGTGCGCACA-CCCACCCGATCGACGAAACCCTTATGTCGTCGGTCAGGTTCTCCGACGATGG
712 CATGTGCGCACACCCCCCCCGATCGACGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
* * * * *
16294709 GGTCCGGACAAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGTCGCAACCCT
777 TGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * *
16294774 CGATCTGGTTCAATCTTATACTGGGAATGAACTCTGTATG
842 CGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
* * ** *
16294814 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCATTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * *
16294879 CGGACAGAGGGGCGGGATATGCAAGCCGAGGATCGGCCAGGTCCCCCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * *
16294944 TACTGCCATAACCCTCGATCCAGTTCAATCTTAGACTGGGAATGAACTCCGTATGCTTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16295009 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCTGCCAGATAGGCGGGATGCGCAGGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
16295074 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCTTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16295139 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCCAGACGAC
326 TT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * * *
16295204 TCATTTTCTATATTTCATGATTTTCGAAACTTTTTACGGTTCGGGATTTGTTAAAATTTTTTTAG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * *
16295269 AAGGAGTTCTGGCCCCACACTTGGTCAG-CATGATCCTTGTATTTTGGTTGGCATGCACAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGT-AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
16295333 ATTCGGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
16295398 ACACTTTAATGGCTACTAGCAGCAAACCAGTAAAATCTCAAAAGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16295463 CTCCAGGTTTGATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
*** * *
16295528 TGTGCGCACACCTCCCTGACCCCCCCGACGTCCAGAACCCCAATGCCATCGGTCAGGTTCTCCGG
714 TGTGCGCACACC-CCC---CCCGATCGACG---A-AACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * *
16295593 TGATGGTGTCCCGACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGT
771 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* **
16295658 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
836 AACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
* *
16295704 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16295769 TGGCCAGAGGGGCGGGATGCACAA-CCTGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCC-GAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
** * * * *
16295833 CTGCTATCGCAACCCTTGATCTAGTCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGATCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * **
16295898 ACCGTCGAAAC-A-------AGTGGGCGGGCACTACGCCGGTAAGAGAGGCAGGG-TGCGCAAGC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGC-GGGATGCGCAAGC
* * * *
16295954 CGTGGATCGATAGGGTAGTATGTGGGTTTAGGCACATCTTCATATTTTTACCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA-
*
16296019 TTTTTTGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
323 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* *
16296084 ACTCGTTTTCTATTTTTCATGATTTTGGAAACTTTTTACAGTTCGGGATTTTTTAAAATTTTTTC
388 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * *
16296149 AAAAGGAGTTTTGGCCCCAAACTTGGTAGGCGTGATCCTTTTATTTTTTTTGGCATGCATAAAAG
453 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
16296214 AATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-CCCCATTTTA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
16296278 GACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
16296343 TCTCGAGGTTTGATGAGGGAAAGGGGGCCAATATAAGGGCCAAGTACCAGCAGCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * * ** * *
16296408 ATGTGCGCGCA---CCCCCTATTGCCGGAACCCCGATAACGTCGATCAGGTTCTCCGACGCTGGT
713 ATGTGCGCACACCCCCCCCGATCGACGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGT
** * * * * * * *
16296470 GTCCCGGTGAA-AAAAATGCGACACCATCACATGCTCAAGCCCAGCATGTGCTGCCTCAACCATC
778 GTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* *
16296534 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
843 GATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
16296573 CTGAGACTGGGATTGAACTCTGTATGCCTAAGTCAACCTACGAAATGAGCGTGCGGGTGCTCTGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16296638 CGGTCAGAGGGGCGAGATGCGTAAGTCG-GAGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAG-GATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * *
16296702 CTACTGCCGCAACCCTCTG-T-CTGGTCTGATCTTAGATTGAGAATGAACTCCGTATGCCTAAGT
130 CTGCTGCCGCAACCCTC-GATCCAGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* *
16296765 CAACCCACGAAACGAGCGTGCGGGCG
193 CAACCGACGAAACGAGCGGGCGGGCG
16296791 CTCAGCTGGC
Statistics
Matches: 4012, Mismatches: 482, Indels: 245
0.85 0.10 0.05
Matches are distributed among these distances:
859 2 0.00
860 108 0.03
861 174 0.04
862 15 0.00
863 7 0.00
864 14 0.00
865 8 0.00
866 298 0.07
867 95 0.02
868 6 0.00
869 253 0.06
870 46 0.01
871 4 0.00
873 1 0.00
874 12 0.00
875 3 0.00
877 11 0.00
879 1 0.00
880 12 0.00
881 917 0.23
882 328 0.08
883 14 0.00
884 112 0.03
885 224 0.06
886 92 0.02
887 7 0.00
888 20 0.00
889 185 0.05
890 418 0.10
891 277 0.07
892 304 0.08
893 32 0.01
894 5 0.00
895 7 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (881 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGATCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
TTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCCCGATCGACGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTC
CCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGAT
CCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16295707 original size:26 final size:26
Alignment explanation
Indices: 16295678--16295730 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16295668 CCGGTCTGAT
16295678 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16295704 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16295730 C
1 C
16295731 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16296579 original size:26 final size:26
Alignment explanation
Indices: 16296550--16296599 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
16296540 GTCCGATCTT
16296550 AGACTGGGAATGAACTCCGTATGCTG
1 AGACTGGGAATGAACTCCGTATGCTG
* *
16296576 AGACTGGGATTGAACTCTGTATGC
1 AGACTGGGAATGAACTCCGTATGC
16296600 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.26, C:0.18, G:0.30, T:0.26
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTG
Found at i:16296875 original size:159 final size:159
Alignment explanation
Indices: 16296576--16296946 Score: 417
Period size: 159 Copynumber: 2.3 Consensus size: 159
16296566 CCGTATGCTG
* * * * * * *
16296576 AGACTGGGATTGAACTCTGTATGCCTAAGTCAACCTACGAAATGAGCGTGCGGGTGCTCTGCCGG
1 AGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * * *
16296641 TCAGAGGGGCGAGATGCGTAAGTCGGAGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTAC
66 CCAGAGGGGCGAGATGCGCAAGTCGGAGATCAGTCGGGTCCCACTCTACGTGCTACCGATCCTAC
*
16296706 TGCCGCAACCCTCT-GTCTGGTCTGATCTT
131 TGCCGCAACCCT-TGGTCCGGTCTGATCTT
* *
16296735 AGA-TTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTG
1 AGACTAG-GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * * * * ***
16296799 GCCATAGGGGCGGGATGCGCAAG-CTGGGGGTCAGTCGGGTCCCACTCTATGTGCTGTTGATCCT
65 GCCAGAGGGGCGAGATGCGCAAGTC-GGAGATCAGTCGGGTCCCACTCTACGTGCTACCGATCCT
* *
16296863 GCTGCCGTAACCCTTGGTCCGGTCTGATCTT
129 ACTGCCGCAACCCTTGGTCCGGTCTGATCTT
* * * *
16296894 AGACTAGGAATGAACTCCGTATGGCTAAG-CTAACCGATGAAACGAGCGAGCGG
1 AGACTAGGAATGAACTCCGTATGCCTAAGTC-AACCCACGAAACGAGCGTGCGG
16296947 TAAGGCGGGC
Statistics
Matches: 178, Mismatches: 29, Indels: 10
0.82 0.13 0.05
Matches are distributed among these distances:
158 5 0.03
159 171 0.96
160 2 0.01
ACGTcount: A:0.21, C:0.26, G:0.31, T:0.22
Consensus pattern (159 bp):
AGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
CCAGAGGGGCGAGATGCGCAAGTCGGAGATCAGTCGGGTCCCACTCTACGTGCTACCGATCCTAC
TGCCGCAACCCTTGGTCCGGTCTGATCTT
Found at i:16301487 original size:26 final size:26
Alignment explanation
Indices: 16301456--16301508 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16301446 CTGGTATGAT
16301456 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16301482 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16301508 C
1 C
16301509 ATAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:16302378 original size:26 final size:26
Alignment explanation
Indices: 16302349--16302400 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16302339 CGATCTGATT
*
16302349 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
16302375 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
16302401 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:16303269 original size:26 final size:26
Alignment explanation
Indices: 16303240--16303292 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16303230 CCTATCCGAT
16303240 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16303266 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16303292 C
1 C
16303293 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16304159 original size:26 final size:26
Alignment explanation
Indices: 16304123--16304174 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16304113 AGTCTGATCT
16304123 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
*
16304149 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
16304175 CTAAGTGAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:16304471 original size:882 final size:880
Alignment explanation
Indices: 16300733--16307547 Score: 8700
Period size: 882 Copynumber: 7.7 Consensus size: 880
16300723 CTGCCGATCC
* * * * * * *
16300733 TGCTGCCACAACCCTCGGTCCGAT-TCGATCTTAAATTGGGAATGAACTCTGTATGGCTAAGCCA
1 TGCTGCCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
16300797 ACCGACGAAATGGGCGGACGGGCGGCCGGGCACTACGCT-ACCTAGAGAGGCAGGAT-CGCAAGC
65 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCTGGCC-AGAGAGGCGGGATGCGCAAGC
* *
16300860 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTCTATCATGCCAATGCCAT
129 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAT
* *
16300925 TTTTCTGGCTTGTAAATTCATACAATGGTCCCATAAGCCTTCATGTGAAGTTTCATGGCAACACG
194 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * * *
16300990 ACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCA-GGATTTTTTAAAACTATTT
259 ACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTT-AGGGATTTTTTAAAATTTTTT
* ** *
16301054 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTCCTGTTGGCATGCAAAAAA
323 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* **
16301119 AAATTCAGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAACGTCCCCATTTC
388 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
16301184 AAACACTTTCATGGCTACTTGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
453 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
16301249 TTCTTGAGGTTTGATGAGGGATA-GGTGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACAT
518 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
16301313 CATGTGCGCACA--------A-CCCCCCAATCGTCGGAACCCCAATGCTGCCGGTCAGATTCTCC
583 CATGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCT
* * * * * *
16301369 GACAATGGTGTCCCGATGAAAAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGTTGCC
648 GGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * * * *
16301434 GTAACTCTCGATCTGGTATGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAA
713 GCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * ** *
16301499 CTTCGTATGCATAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCATCCAGAGGGGCTGGA
778 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
** ** * * *
16301564 TGCGTGAGTTGGGGATCGGCCGGGTCCCCTTCTGTGTGCTACCTA
843 TGCGCAAGCCGGGGATCGGTCGGGTCCCC-TC----TGCT-GC-G
* * * ** * *
16301609 TCCAGCTGCCGTAACCCTTGGTCTGATCCAATATTAGATTGGGAATGAACTCCGTATGCCTAAGC
1 T---GCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
16301674 CAACCGACGAAACAAGCGGGCGGACGGGCGGGCACTACGTTGGCCAAAGAGGCGGGATGCACAAG
63 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAG
* * * *
16301739 CCGTGGATGGATAGGGTGGTAGGTGGGTTTAGGCGCATCTTCATATTTCTACCATGCCTATGCCA
128 CCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCA
16301804 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
193 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * * * *
16301869 GACTCGTTTTCTATTTTTCATAATTTTTGAAACCTTTTACGGTTCGGGATTTTTCAAAATTTTTT
258 GACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTTTT
* * * * *
16301934 CAGAAGGAGTTTTCGTCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGTATGTACAAAA
323 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
16301999 ACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTC
388 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
16302064 AGACACTTTAATGGCTACTAGTAGCAAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
453 AGACACTTTAATGGCTACTGGCAGC-AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
16302129 GTTGTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACA
517 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
16302194 TCATGTGCGCACA-CCCCCCGACCACCCCCTATCGTCGGATCCCCAATGCCGTCAGTCAGAG-TC
582 TCATGTGCGCACACCCCCCCGACC-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG-GTTC
* * * *
16302257 TCCT-GCGATGGTGTCCCCGGA-GAAGTAAAATACAGCAACAGCGCATGCCCGAGCCCAGCATGT
645 T-CTGGCGATGGTGT-CCC-GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * *
16302320 GCTGCCGCAACCCTCAGT-TCGATCTGATTTTAGACTGGGAATGAACTCTGTATGCTTAGACTGG
707 GCTGCCGCAACCCTCGGTCTAG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
16302384 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAAAGG
771 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* *
16302449 GACGGGATGCGCAAGCCGGGGATCGGTTGGGTCCCCCTCTGCGTGCTGTCG
836 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGT--CCC-CT-C-TGCTG-CG
* ** * *
16302500 ATCTTGCTGCCGCAACCCTTGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCATATGCCTAAG
1 ----TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
16302565 CCGACCGATGAAACAAGCTGGCAGGCGGGCGGGCGGGCACTACG-TCGGCCAGAGAGGCGGGATG
62 CCAACCGACGAAACGAGC--G--GGCGGGCGGGCGGGCACTACGCT-GGCCAGAGAGGCGGGATG
* *
16302629 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
122 CGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCA
16302694 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
187 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * * *
16302759 CAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTATGGTTTGAGATTTTTTAAAA
252 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTAGGGATTTTTTAAAA
* * * *
16302824 TTTTTTCGGAAGGTGTTTTGGCCCCAAACTTCGTAGACGTGATCCTTGTATTTTTGTTGGCTTGC
317 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
*
16302889 A-AAAAAAATTCAGCTAAAAACTCGAAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
382 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
16302953 CATTTCAGACACTTTAAAT-GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAG
447 CATTTCAGACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
** * * *
16303017 GTGTGAAATCTCGAGGTTTGATGAGAGATAGGAGGTCAATATAAGGGCCAAGTACCAGCACCCAT
511 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* *
16303082 CGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCG-CTGGAACCCCAATGCCGCCAGTCA
576 CGCACATCATGTGCGCACACCCCCCCGACCCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCA
* * *
16303146 GGTTCTCTGACGATGGTGTCCCGACGAAGAAAAATACGGCACC-GCACATGCTCGAGCCTAGCAT
640 GGTTCTCTGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAT
* * *
16303210 GTGCTGTCGGAACCCTCGGTCCTA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
705 GTGCTGCCGCAACCCTCGGT-CTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
*
16303274 GGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGGCGCTCAGCCGGCCAG
769 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGGCGCTCAGCCGGCCAG
* ** * *
16303339 AGGGGCGGGATGCGTAAGTTGGGGATCGATTGGGTCCCC-CT-CTGCG
833 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTCTGCTGCG
* * * *
16303385 TGTTGCCGTAACCCTCGGTCTGGTCTTATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
16303450 TCGATGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCT-GCCAGAGAGGCGGGATGCGCAAGCC
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG-CTGGCCAGAGAGGCGGGATGCGCAAGCC
*** * * * *
16303514 ATGGATCGATAGGGCAATAGGTGGGTTTAGGCACATCTTTATATTTTTGCCATGCCAATACCATT
130 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATT
* * *
16303579 TCTCTGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
195 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
16303644 CTTGTTTTCTATTTTTCATGATTTTCAAAACATTTTATGGTTAGGGATTTTTTAAAATTTTTTCA
260 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTTTTCA
* *
16303709 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGAATGCA-AAAAAC
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-
* * *
16303773 TATTCAGCTAAAAACTCGAATTGTACAAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * **
16303838 GACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAAAGGGTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
16303903 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
519 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
16303968 ATGTGCGCACACCCCCCCGACCCCCCAGATCGCCGGAACCCCAATGCTGTCGGTCAGGTTTTCTG
584 ATGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTG
* * * *
16304033 GCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAACATGTGCGGCCG
649 GCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
*
16304098 CCAACCCTATGGTCTAGTCTGATCTTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
714 -CAACCCT-CGGTCTAGTCTGATC-TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * * * * *
16304163 AACTCTGTATGCCTAAGTGAACCCACAAAATGAACGTGCGAGGCGCTCAACCGGCTAGAGGGGCG
776 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG-GGCGCTCAGCCGGCCAGAGGGGCG
* * *
16304228 GGATGCACAAGCCGGGGATCGGCCGAGTCCCC-CT-CTGCG
840 GGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTCTGCTGCG
* * * *
16304267 TGCTGCCGCAACCCTTGGTCTGGTTTGATCTTAGACTGGGTATGAACTCTGTATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
16304332 CCGGCGAAACGAGCGGGCGGGCGGGCGGGCTCTACGCTGGCCAAAGAGGTGGGATGCGCAAGCCG
66 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAGCCA
* * *
16304397 TGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
*
16304462 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTAATGGCAAGACGAC
196 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
16304527 TCGTTTTCTACTTTTCATGATTTTTGAAAA-TTTTTACCGTTCA-GGATTTTTTAAAATTTTTTC
261 TCGTTTTCTATTTTTCATGATTTTT-AAAACTTTTTACGGTT-AGGGATTTTTTAAAATTTTTTC
* * *
16304590 AGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCCCAAAAA
324 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
16304655 TATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
16304720 AACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
16304785 TCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAAGGCCAAGTACCAGTACCAATCGCACATC
519 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
16304850 ATGTGCGCACACCCCCCC-AGCCCTCCCGATCGTCGAAACCCCAATGCCGCCGGTCAAGCTCTCC
584 ATGTGCGCACACCCCCCCGA-CCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCT
* * *
16304914 GACGATGGTGTCCC-AGCGAAGAAAAATACGGCACTAGCACATGCCCGAGCCTAGCATGTGCTGC
648 GGCGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * ** * * *
16304978 TGCAACCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTTCGCATGCTTAGACTAGGAATGA
712 CGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * *
16305043 ACTCTG-ATGCCTAAGTCCACCCACGAAACGAACGTGCGGGCGCTAAACCGGCCAGAGGGGCGGG
777 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * *
16305107 ATGCGCAAGACGGGGATTGATCGGGTCCCC-CT-CTTCG
842 ATGCGCAAGCCGGGGATCGGTCGGGTCCCCTCTGCTGCG
* * *
16305144 TGCTGCCAATCTTTCAGTTGGAACCTCGGTCTGGTCTGATCTGAGACTGGGAATGAACTCCGTAT
1 TGCTG-C---C--GCA-----ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * ** * * *
16305209 GCCTAAACCAACTGAAGAATTGA--------ACGGGTGGGCACTACGCCGGCCAGAGAGGCGGGA
55 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGA
* * *
16305266 TGCGCAAGCCGTGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTCCTACCATGC
120 TGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGC
* *
16305331 CAATGCCATTTGTCTGGCTTGTAAATTCATACAATGGTCGCTTAAGCCTTCATGTGAAGTTTCAT
185 CAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
* * * * * * *
16305396 TGTAAGACGACTCGTTTACTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTAAA
250 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTAGGGATTTTTTAA
* * * *
16305461 AATTTTTTTAGAAGAATTTTTGGCCCCAAACTTGGTGGACGTGATCCTTGTATTTTTGTTGGCAT
315 AATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
16305526 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG-C
380 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
16305590 CCCATTTTAGACACTTTAATGGCTTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGG
445 CCCATTTCAGACACTTTAATGGC-TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * *
16305655 GGGTGTGAGTTCGCAAGGTTTGATGAGGGATGGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
509 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * * *
16305720 ATCGCACATCATGTGCGCACACCCCCTCGGCCCCACCCGATCGTTGGTACCACAATGCCACCGGT
574 ATCGCACATCATGTGCGCACACCCCCCCGACCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGT
* * *
16305785 CAGGTTCACCGGCGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGC
638 CAGGTTCTCTGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGC
* * * * * * * *
16305850 ATTTGCTGTCGTAACCGTCGGTCTGGTCTGCTTTTAGACTGGGAACGAACTCCGTATGCTTAGAC
703 ATGTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * ** ** *
16305915 TGGGAATGAACTCCGTACGCCTAAGTCAACCCACGAAAAGAGCGTATGATCGCTCAGTCGGCCAG
768 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* ***
16305980 AGGGGCGGGATGCGCAAGCCGAGGATCTACCGGGTCCACCTCTTCGTGCTGCCG
833 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-C-CC-C-TC-TGCTG-CG
* *
16306034 ATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
1 ----TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
16306099 CCAATCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCGGGCCAGAGAGGCGGGATGCGCAA
62 CCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAA
*
16306164 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
127 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCC
*
16306229 -TGTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTAATGTGAAGTTTCATGGCAAG
192 AT-TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* * *
16306293 ACGACTCGTTTTTTATTTTTCAGGATTTTTAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTT
256 ACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTT
* * *
16306358 TTCAGAACGATTTTTGGCCCCAAACTTGGTA-AGCGTGATCCTTGTATTTTTTTTGGCATGCACA
321 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA-CGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
16306422 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTTAAAAAAGTATCCCCAT
385 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
16306487 TTTAGATACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
450 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
16306552 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGTACCCATCGCA
515 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
16306617 CATCATGCGCGCACACCTCCCCCCGGCCCCCTCGATCG-CTGGAACCCCAATGCTGCCGGTCAGG
580 CATCATGTGCGCACA-C-CCCCCCGACCCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGG
* ** *
16306681 TTCTGC-GACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATG
642 TTCT-CTGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * * *
16306745 TGCTTCTGTAA--CTC--TC--G---G-TC-----C-----A-G---TCTG-AT-CTTAGACTGG
706 TGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
16306784 GAATGAACTCCGTATGCCTAAGTCAACACATGAAACGAGCGTGCGGGCGCTCAGTCGACCAGAGG
771 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * *
16306849 GGTGGGATGCGTAAGCCGAGGATCGGTAGGGTCACCCTCTACGTGCTGTCG
836 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGT--CCC-CT-C-TGCTG-CG
* * * *
16306900 ATCCTGCTGCTGCAACCCTCGGTTCT-GTTTGATCTTAGACTGGGAATGAACTCCATATACCTAA
1 ----TGCTGCCGCAACCCTCGG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * ** * *
16306964 GCCAACCGAC-AAA--A-CGGGCCGGCCGGCGGGCACTATGCCCGTCAGGGAGGCGGGATGCGCA
61 GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCA
* ** * *
16307025 AGCCATGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTACTGTGCCACTAC
126 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGC
* *
16307090 CAATTTTCTGGCTTGTAAATTCAGACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
191 CATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAG
* * * * *
16307155 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTTAAATTTT
256 ACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTT
* * * * *
16307220 TTTAGAAGGTGTTTTGGCCCCAAACGTGGTAGACGAGATACTTGTATTTTTGTTGGCATGCACAA
321 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
16307285 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
386 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
16307350 TTAGACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
451 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * **
16307415 AGTTCTTGAGGTTTGATAAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAGCACCCATTACAC
516 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
16307480 ATCATGTGCGCACACCCCCCTAGGCCCCCCCCGATCGTCGGAACCCCAATGCTGCCGGCCAAGTT
581 ATCATGTGCGCACACCCCCC--CGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
16307545 CTC
644 CTC
16307548 CAACGATAGG
Statistics
Matches: 5243, Mismatches: 580, Indels: 247
0.86 0.10 0.04
Matches are distributed among these distances:
860 5 0.00
861 2 0.00
862 509 0.10
863 3 0.00
865 4 0.00
866 169 0.03
867 5 0.00
868 3 0.00
871 1 0.00
872 1 0.00
876 1 0.00
877 347 0.07
878 294 0.06
879 191 0.04
880 790 0.15
881 298 0.06
882 872 0.17
883 71 0.01
884 2 0.00
885 3 0.00
886 4 0.00
887 2 0.00
888 61 0.01
889 3 0.00
890 9 0.00
891 491 0.09
892 481 0.09
893 83 0.02
894 161 0.03
895 98 0.02
896 279 0.05
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (880 bp):
TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAGCCA
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTTTTCAG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGC
GATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
ACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
GCAAGCCGGGGATCGGTCGGGTCCCCTCTGCTGCG
Found at i:16308440 original size:26 final size:26
Alignment explanation
Indices: 16308404--16308456 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16308394 CTAGTCTGAT
16308404 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16308430 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16308456 C
1 C
16308457 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16309330 original size:26 final size:26
Alignment explanation
Indices: 16309283--16309335 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16309273 CTGGTCCGAT
* * *
16309283 CTTAGACTGGGAATTAACTTCGTATG
1 CTTAGACTAGAAATGAACTTCGTATG
*
16309309 CTTAGACTAGAAATGAATTTCGTATG
1 CTTAGACTAGAAATGAACTTCGTATG
16309335 C
1 C
16309336 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.15, G:0.21, T:0.34
Consensus pattern (26 bp):
CTTAGACTAGAAATGAACTTCGTATG
Found at i:16309800 original size:878 final size:875
Alignment explanation
Indices: 16307556--16314618 Score: 9649
Period size: 878 Copynumber: 8.1 Consensus size: 875
16307546 TCCAACGATA
* * *
16307556 GGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGTCGGCCAGAG
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * * * * * ** **
16307621 GGGCGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCTTCTGCGTGCTGCCCATCCTACTATCGT
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* * *
16307686 AACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCTGCATGCCTAAGCCAACCGACGAAA
131 AACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAA
* *
16307751 TAGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGTGGGATGCGCAAGCCGTGGATCGAT
195 -A----------CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGAT
* * *
16307816 AGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCCGTGCC-ATGCCATTTTTTTGGCTT
249 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* * **
16307880 GTAAATTCATATAATGGTACCTTAAGCCTTCATGTGAAGTTTCATGAAAAGACGACTCGTTTTCT
314 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * *
16307945 ATTTTTCACGATTTTTGAAAGTTTTTACGGTTCGGGATTATTTAAAATTTTTTC---AGGAGTTT
379 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* *
16308007 TGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAA
444 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
16308072 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAT
509 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAT
* * * * *
16308137 GGCTACTAGCAGCAAACTTGTAAAATCTCAAATACTCTTTAA-GTGGTGTGAGTTTTCGAGGTTT
574 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
*
16308201 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCCAGCACCCATCGCACATCATGTGCGCACA
639 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * * *
16308266 CCCCCCGGTCCCCCCATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGACGACGGCGTTCC
704 CCCCCCGGTCCCCCCATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCC
*
16308331 GGTGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT
769 GGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT
* * *
16308396 AGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTG
834 GGTCCGATCTTAGACTGGGAATGAACT-CGTATGCTTAGACTG
* * *
16308439 GGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAT
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * * ** * **
16308504 GGGCGAGATGCTCATGTCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTACCGATCATGCTGCCGT
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* *
16308569 AACCCT-AGGTTCGGTCCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAA
131 AACCCTCA-GTCCGAT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAA
*
16308632 AACGGGCGGGCACTATGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAG
194 AACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAG
* *
16308697 GTGGGTTTAGGCACATGTTCATATTTCTGCCATGCCAACGCCATTTTTCTGGCTTGTAAATTCAT
259 GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
* **
16308762 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAAACGGTTCGTTTTCTATTTTTCATG
324 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * * * *
16308827 ATTTTTGAAACTTTTTACTGTTCTGGATTTTTTTAAATTTTTTCAGAAAGAGTTTTGGCCCTAAA
389 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
* * *
16308892 CTTGGAAGAGGTGATCC-TGATGTTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
454 CTTGGTAGACGTGATCCTTG-TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * *
16308956 GTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCACCATTTCAGACACTTTAATGGCTACTGG
518 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGG
* * *
16309021 CAGCAAACCTGTAAAATCTCAAATGCTATTTAA-GGGGTGTGAGTTCCCGAGGTTTGATGAGAGA
583 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* * *
16309085 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACACGTCGCACATCATGTGCGCACACAACTCCCG
648 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC--CCCCCG
* * * **
16309150 GTCCTCCCCCATCGCCGGAACCCTAATGCCATCGATCAGGTTATCCGACGATGGTGTCCCGGCAA
711 GT-C-CCCCCATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGA
* * * * * * *
16309215 AGAAAAATGCGACACCAGCACATGCTCGAGCCTAGCCTTTACTGGCGCAACCCTCGGTCTGGTCC
774 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCC
* *
16309280 GATCTTAGACTGGGAATTAACTTCGTATGCTTAGACTA
839 GATCTTAGACTGGGAATGAAC-TCGTATGCTTAGACTG
* * * * ** * *
16309318 GAAATGAATTTCGTATGCCTAAGTCAACCCACGAAACGAGTGTTTGGGCGTTCAGCAGGCCAGAG
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
** * *
16309383 GGGTAGGATGCACAAGCCCGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCAC
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* *
16309448 AACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACAAAA
131 AACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAA
* * * *
16309513 CGGGCGGGTACTATG-CAGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGTTAGGT
196 CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
*
16309577 GGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
261 GGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
16309642 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
326 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * *
16309707 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGATGGACTTTTGGCCCAAAACT
391 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACT
*
16309772 TGGTATACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
456 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
* * *
16309837 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCACTAGTTCAAACACTTTAATGGCTACTGGCAG
521 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAG
*
16309902 CAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-
586 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* *
16309966 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGTACACCGCCTCCGGTC
651 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CC-CCGGTC
* * * *
16310031 CCCCCATCACCCGAACCCCAATGTCGCCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAA
714 CCCCCATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAA
*
16310096 AATACGGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCC-CTAACCCTCGGTCT-G---G---
779 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC-AACCCTCGGTCTGGTCCGATC
*
16310152 -T-G-C---------A-----AT-CTTAGATTG
843 TTAGACTGGGAATGAACTCGTATGCTTAGACTG
* * * * *
16310167 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGAGCGCTTAGCCGACCAGAT
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * * ** *
16310232 GGGCGGGATGCTCAAGTCGGGGATCGGTCGGGTCACCCTCTACGTGCTGCCGATCCTGCTATCTC
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* * * * **
16310297 AACCCTC-GATCCGATCCT-ATCATAGACTGGGAATGAACTCCCTATACCTAAGCCAACTGATGA
131 AACCCTCAG-TCCGAT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAA
* * * ** *
16310360 AACGGGCGGGCAGTATGCCGGTCAGAGAGGTAGGATGCGCAAGCCATGGATCTATAGGGTGGTAG
194 AACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAG
* *
16310425 GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTTAT
259 GTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
* * *
16310490 ACAATGGTCCCTTAAGCCTTCATGTGAAGGTTCATGGCAAGATGACTCGTTCTCTATTTTTCATG
324 ACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * *
16310555 ATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAACTTTTTTCAGAAGGAGTTTTGGCCCCAAC
389 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA
* * *
16310620 CTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATACAAAAAAAAATTCAGCTAAAAACTCGAAG
454 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
*
16310685 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAAACACTTTAATGGCTACTGGC
519 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGC
16310750 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
584 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
16310815 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGT
649 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGT
* * * **
16310880 CCACCCCATCGTCGGAACCCCAATGCCG-CCAGTCAGGTTCTCTGATAATGGTGTCCCGGTGAAG
713 CC-CCCCATCGCCGGAACCCCAATGCCGTCGA-TCAGGTTCTCCGACGATGGTGTCCCGGTGAAG
** * * * * *
16310944 AAAAATGCGGTTCCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCAGTCCGGTCCAA
776 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGA
16311009 TCTTAGACTGGGAATGAACATCGTATGCTTAGACTG
841 TCTTAGACTGGGAATGAAC-TCGTATGCTTAGACTG
* ** * * * *
16311045 GGAATGAACTCCGTACGCCTAAGTCAACCCGTGAAACGAACGTGCGGGCGCTTAGCCGACCAGAT
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
*** * * * * *
16311110 GGGCGGGATGTTTATGTCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGTCAC
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* *
16311175 AACCCTCGGTCCGATCCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
131 AACCCTCAGTCCGAT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAA
16311239 ACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
195 ACGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
* *
16311304 TGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATA
260 TGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATA
* ** *
16311369 TAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGGTTCGTTTTTTATTTTTCATGA
325 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
* * *
16311434 TTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAATTTTTTCAGAAAGAGTTTTGGCCCCAAAC
390 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC
* * * * * *
16311499 TTGGTAGACATGACCCTTGTACTTTTGGTGGCATGCACATAAAAATTCAGCTAAAAAATCGAAGT
455 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* * *
16311564 GTACAAGATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACAGGCA
520 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCA
*
16311629 GCAAACCTGTAAAATCTCAAATGCTTTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
585 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
16311693 GGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCATGTGTGCACACACCCCCCGGT
650 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA--TGTGCGCACACCCCCCGGT
** * * * * ***
16311758 CCCCCCATCGCCGGAACCCCAATGCCACCGGTCAGGTTATTCAACGATGGTGTCCCGACAAAGAA
713 CCCCCCATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAA
* *
16311823 AAATGCGGCACCAGCACATGCTCGAGCACAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATC
778 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATC
16311888 TTAGACTGGGAATGAACTCCGTATGCTTAGACTG
843 TTAGACTGGGAATGAACT-CGTATGCTTAGACTG
* * * ** * *
16311922 GGAATGAACTCCCTATGCCTAAGTCAACCCACGAAATGAGCGTTCGACCGCTCAGTCGACC-GAG
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
** * * *
16311986 GGGTAGGATGCGCAAGCTGGGGATCGGTCGTGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* * * * * *
16312051 AACCCTCAGTCTGATCTGATCTCAGACCGAGAATGAACTCCGTATGCCTAAGCCAATCGACCAAA
131 AACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAA
* * *
16312116 CGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCACATGCCATGGATCGATAGGGTGGTAGGT
196 CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* *
16312181 GGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGCCTTGTAAATTCATAC
261 GGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
* **
16312246 AATGGTCCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGACGGTTCGTTTTCTATTTTTCATGAT
326 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * *
16312311 TTTTGAAACTTTTAACGGTTCGGTATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCGCAAACT
391 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACT
* *
16312376 TGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCAAAGTG
456 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
*
16312440 TACAAGATTTTGTGACCATTTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATTGCTACTGGCA
521 TACAAGATTTTGTGACCA-TTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCA
* *
16312505 GCAAGCCTGTAAAATCTCAAATGCTCTTGAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
585 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * * *
16312570 GGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCACACATCATGT-TGTACACCCGTCCCGAT
650 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC--CCCGGT
* * * * * * *
16312634 CCCTCCATTGTCGGAACCCCAATGCCGTCGGTCAGCTGCTCCGACGATGATGTCCCGGTGAAGAA
713 CCCCCCATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAA
* * * * *
16312699 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGTTCTGATC
778 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATC
16312764 TTAGACTGGGAATGAACTCTGTATGCTTAGACTG
843 TTAGACTGGGAATGAACTC-GTATGCTTAGACTG
* * *
16312798 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGAGCTTAGCCGGCCAGAG
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * *
16312863 GGGCGGGATGCACAAGCCGAGGATCGGTCGGGTCCCCCTCAACGTTCTACCGATCCTGCTGCCAC
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* * * *
16312928 AACCCTCTGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAA
131 AACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAA
* * *
16312993 TAGGCGGGCAGGCAGGCAGGCACTACGTCGGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGAT
195 -A--C--G--GGC--G--GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGAT
* **
16313058 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTATCACTT
249 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
16313123 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
314 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* ** * * *
16313188 ATTTTCCATGATTTTCAAAAATTTTTATGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTT
379 ATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* *
16313253 TGGCCCCGAACTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
444 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* * *
16313318 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTAGTTCAGACACTTTAAT
509 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAT
* *
16313383 GGCTACAGGCAGCAAGCCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
574 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
16313448 GATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCCCACATCATGTGCGCACA
639 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * *
16313513 CCCCCCAGCCCCCCCGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGGTGTCC
704 CCCCCCGGTCCCCCC-ATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCC
**
16313578 CGGTGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-
768 CGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
*
16313638 T-G---G--C-T----T--G-AT---C-CG-AT-CTTTGACTG
833 TGGTCCGATCTTAGACTGGGAATGAACTCGTATGCTTAGACTG
* * *
16313661 GGAATGAACTCCGTATGCCTAACTCAACCCACGAAACGAGCGCGCTGGCGCTCAGCCGGCCAGAG
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
** * * * * *
16313726 GGGC-GGATGCACAAGCCGGGGATCGACCGGGTCCCCATCTATGTGCTGCTGATCCTGCTGTCAC
66 GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
* * *
16313790 AGCCCTC-GATCCAATCTGATCTTAGACCGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAA
131 AACCCTCAG-TCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC---CG--
* * *
16313854 ACAAGCAAGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGTGCAAGTCGTGGATCGA
190 ACAA--AA-C----GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGA
* * *
16313919 TAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTC-G----GCC-ATGCCAATTTTCTAGCT
248 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
16313978 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
313 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* ** * * *
16314043 TATTTTTTATGATTTTCAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCAGAAGGGGTT
378 TATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* *
16314108 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGACATGCATAAAAAAATTCAGCTA
443 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
** **
16314173 AAAACTCGAAGTGTACAAGATTTTGTGACTTTTTGAAAAAAGTGTCCCCACGTCAAACACTTTAA
508 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
* * * *
16314238 TGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTATTCAAGGGGCTGTGAGTTCTCGAGGTT
573 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
*
16314303 TGATGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
638 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * *
16314368 ACCCCCCAGCCCCTCCCGATCGTCGAAACCCCAATGCCGTCGATCAGGTTCTCCAACGATGGTGT
703 ACCCCCCGGTCCC-CCC-ATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGT
** * **
16314433 CCCGACGAAGAAAATTATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
766 CCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* *
16314498 TCTGGTCTGATCTTAGATTGGGAATGAACTCTGTATGCTTAGACTG
831 TCTGGTCCGATCTTAGACTGGGAATGAACTC-GTATGCTTAGACTG
* *
16314544 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTTAGCCGGCCAGAA
1 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
16314609 GGGCGGGATG
66 GGGCGGGATG
16314619 TGATCCGATC
Statistics
Matches: 5495, Mismatches: 566, Indels: 237
0.87 0.09 0.04
Matches are distributed among these distances:
848 1 0.00
849 178 0.03
850 424 0.08
851 122 0.02
852 32 0.01
853 1 0.00
856 390 0.07
857 104 0.02
858 2 0.00
859 1 0.00
860 1 0.00
861 4 0.00
862 180 0.03
863 72 0.01
864 3 0.00
865 4 0.00
866 10 0.00
867 5 0.00
868 4 0.00
869 1 0.00
870 2 0.00
871 96 0.02
872 122 0.02
873 2 0.00
874 10 0.00
875 319 0.06
876 733 0.13
877 464 0.08
878 1015 0.18
879 360 0.07
880 4 0.00
881 3 0.00
882 6 0.00
883 236 0.04
884 6 0.00
885 4 0.00
887 2 0.00
888 10 0.00
889 511 0.09
890 51 0.01
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (875 bp):
GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
GGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCAC
AACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAA
CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
GGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATAC
AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACT
TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAG
CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGTCCC
CCCATCGCCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAA
TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTA
GACTGGGAATGAACTCGTATGCTTAGACTG
Found at i:16311916 original size:26 final size:26
Alignment explanation
Indices: 16311887--16311939 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16311877 CTGGTCCGAT
*
16311887 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
16311913 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
16311939 C
1 C
16311940 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:16312792 original size:26 final size:26
Alignment explanation
Indices: 16312763--16312815 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16312753 CCGTTCTGAT
*
16312763 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16312789 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16312815 C
1 C
16312816 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16314538 original size:26 final size:26
Alignment explanation
Indices: 16314509--16314561 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16314499 CTGGTCTGAT
* *
16314509 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16314535 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16314561 C
1 C
16314562 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16315346 original size:26 final size:26
Alignment explanation
Indices: 16315317--16315369 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16315307 CCGGTCTAAT
16315317 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
* *
16315343 CTTAGACTGGGAATCAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
16315369 C
1 C
16315370 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:16316212 original size:26 final size:26
Alignment explanation
Indices: 16316174--16316224 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16316164 CCGGTTCGAT
* *
16316174 CTTAGACTGGGAAAGAACTCTGTATA
1 CTTAGACTAGGAAAGAACTCCGTATA
*
16316200 CTTAGACTAGGAATGAACTCCGTAT
1 CTTAGACTAGGAAAGAACTCCGTAT
16316225 GCCTAAGTCA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.33, C:0.18, G:0.22, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAAAGAACTCCGTATA
Found at i:16317988 original size:26 final size:26
Alignment explanation
Indices: 16317952--16318004 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16317942 GCGGTTCGAT
* *
16317952 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16317978 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16318004 C
1 C
16318005 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16318729 original size:891 final size:887
Alignment explanation
Indices: 16315555--16318865 Score: 4847
Period size: 889 Copynumber: 3.7 Consensus size: 887
16315545 AACGAGCAGA
* *
16315555 CGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGC
* *
16315620 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCATGTGAAGT
66 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
* * *
16315685 TTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTTGGGATTT
131 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTT
* * * *
16315750 TTTTAAATTTTTTCAGAAGGAATTTTGGCCCCAAACTTGGAAGACGTGATCCTTGTATTCTTGTT
196 TTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* *
16315815 AGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
261 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
*
16315880 GTGTCCCCATTTCAGACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
326 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
16315945 AAGGGGGAGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGC
391 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * *
16316010 ACCCATCGTACATCATGTGTGCACACCCCCCCGCCCCCCCGATCAAT-GGAACCCCAATGCCGTC
456 ACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC-GTCGGAACCCCAATGCCGTC
* * *
16316074 GGTCAGGTTCTCCTACGATGGTGTCCCGACGATGAAAAATGCGGCACCAGCACATGCCCGAGCCC
520 GGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
* * * * * *
16316139 AGCATGTGCTGTCGCAACGCTCGGTCCGGTTCGATCTTAGACTGGGAAAGAACTCTGTATACTTA
585 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * *
16316204 GACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGTGGGCGCTCAGCCAGG
650 GACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCAGC
* * * * *
16316269 CGGAGGGGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCTTGCT
715 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTA-TGATCCTGCT
* * * * *
16316334 GTCACAACCCTCGATCTGGTCCGATCTTAGAATGGGAACGAACTCCGTATGCCTAAGCCAACCGA
779 GCCACAACCCTCGAT-TGGTTCGATCTTAGACTGGGAACGAATTCCGTATGCCTAAGCCAACTGA
* ** *
16316399 CGAAACGAGCGGGCGGGCGGGTGGGCACTATACCGGCCAGGGAGG
843 CGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGG
* * *
16316444 CAGGATGCGCAAGCCGTGGATTGAAAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGC
* * *
16316509 CATGCCAATGCCATTCTTCTGGCTTGTAAATTCAAACAATAGTCCCTTAAGCCTTCATGTGAAGT
66 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
* * *
16316574 TTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTAC-GATTCAGGATT
131 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGA-GATT
* * * *
16316638 TTTTAAAATTTTTTCAGAAGGGGTATTGGCCCCAAATTTGGTA-ATCATGATCCTTGTATTTTTG
195 TTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA-CGTGATCCTTGTATTTTTG
* *
16316702 TTGTCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACTATTTGAAAA
259 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
16316767 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
324 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
**
16316832 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGTTCCAAGTACCA
389 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * *
16316897 GCACCCGTCGCACATCATGTGCGCACACCCCCCCGG-CCCCCCGATCGCCGGAACCCTAATGCCG
454 GCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCG
* * **
16316961 TCGGTCAGGTTCTTCGATGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCTTGAGC
518 TCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGC
* *
16317026 CCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCT
583 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * * * * * *
16317091 TAGACTAGGAATGAACTCTGTAAGCCTAAGTTAATCCACGAAACGAGCGTGCGGGTGCTCAGCCG
648 TAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCA
* * * * *
16317156 GCCAGAGGGGTGGGATGCGAAAGCCGGGGATCGGTCGGGTCTCCATCTGCGTGCTGCTGATCCTG
713 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT-ATGATCCTG
* * * * * *
16317221 CTGCCACAACCCTCGGCTCGG-TCTGGTCTTATACTGGGAACAAACTT-TGTATGCCTAAGCCAA
777 CTGCCACAACCCTC-GATTGGTTC-GATCTTAGACTGGGAACGAA-TTCCGTATGCCTAAGCCAA
* * *
16317284 CTGACGAAATGAGCGGGTGGGCGGGCGGGCACT-CGTCGGCCAGAGAGG
839 CTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGG
* * * *
16317332 CGGGATGCGTAAGCCGTGGATCGATGGGGTGGTAGGTGGGTTTAGGCACATCTTCAAATTTCTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGC
*
16317397 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCATGTGAAGT
66 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
* * * *
16317462 TTCATGGCAAGATGACCCGTTTTCTA-TTTTCTACGATTTTTGAAACTTTTTAGGGTTCGAGATT
131 TTCATGGCAAGACGACTCGTTTTCTATTTTTC-ACGATTTTTGAAACTTTTTACGGTTTGAGATT
* *
16317526 TTTTAAAATTTTTTCAGAAGGAGTTTTGTCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGT
195 TTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* *
16317591 TGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTAAAAAA
260 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * *
16317656 AGTGTCCCCATTTAAGATACTTTGATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
325 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * * *
16317721 GAAAGGGGTGTGAGTTCTCGAGGTTTCATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAA
390 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * *
16317786 CACCCATCGCACATCATGTGCGCACACACCCCTGGCCCCCCCGATTGTCGGAACCCCAATGCCGC
455 CACCCATCGCACATCATGTGCGCACAC-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGT
* * * *
16317851 CGGTCAAGTTCTCCGGCGATGGTGTCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
519 CGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCC
* * * * * * *
16317916 CAGCATGTGCTGCCGTATCCCCCGATGCGGTTCGATCTTAGATTGGGAATGAACTCCGTATGCTT
584 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * * * *
16317981 AGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGTTTAGCCTG
649 AGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCAG
*** * * * * * * *
16318046 CCAGAGAACCGGGATACGCAAGTCGGGGATCGGCCCGATCCCCCTCTACATGCTATAGATCCTGC
714 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTAT-GATCCTGC
* * * *
16318111 TGCCGCAACCCTTGATTAGGTTCGATCTTAGACTGGTAATGAATTCCGTATGCCTAAGCCAACTG
778 TGCCACAACCCTCGATT-GGTTCGATCTTAGACTGGGAACGAATTCCGTATGCCTAAGCCAACTG
*
16318176 ACAAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGG
842 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGG
* *
16318222 CGGGATGCGCAAGCCATGGATCGATGGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGC
1 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGC
* *
16318287 CGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
66 CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
* * *
16318352 TTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACAGTTTGAGATTT
131 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTT
* *
16318417 TTTAAAATTTTTTTCAGAAGGATTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGT
196 TTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * * *
16318482 TGGCGTGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAATCGAAAAA
260 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * * *
16318547 AGTGTCCCCATTTCAGACACTTTAATAGCTACCGTCAGCAAACCTGTAAAATCCCAAATGCTCTT
325 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
16318612 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAG
390 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * *
16318677 CACCCATTGCACATCATGTCCGCACACCCCCCGGACCCTCCCGATCGTCGGAACCCCAATGTCGT
455 CACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCCGATCGTCGGAACCCCAATGCCGT
* * *
16318742 CGGTCAGGTTCTTCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCAAATGCCCGACCC
519 CGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCC
* *
16318807 CAGCATGTGCTGCCGCAACCCTTGGTCCGGTCCTATCTTAGACTGGGAATGAACTCCGT
584 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
16318866 TCCCCTCTGC
Statistics
Matches: 2148, Mismatches: 253, Indels: 40
0.88 0.10 0.02
Matches are distributed among these distances:
887 6 0.00
888 457 0.21
889 1077 0.50
890 214 0.10
891 394 0.18
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (887 bp):
CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGC
CATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGT
TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTT
TTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
ACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCG
GTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
ACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCAGCC
AGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTATGATCCTGCTGC
CACAACCCTCGATTGGTTCGATCTTAGACTGGGAACGAATTCCGTATGCCTAAGCCAACTGACGA
AACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGG
Found at i:16320238 original size:699 final size:699
Alignment explanation
Indices: 16319200--16320557 Score: 1975
Period size: 699 Copynumber: 1.9 Consensus size: 699
16319190 ATTTTTTAAA
* *
16319200 ATTTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGATTG
1 ATTTTTTTAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGATTG
* * *
16319265 CACAAGAAAATTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCC
66 CACAAGAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCA
* *
16319330 CCATTTCAGACACTTTAATTACTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTATGAGG
131 CCATTTCAGACACTTTAATGACTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGG
* *
16319395 GTACGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAACACCCAT
196 GTACGAGTTCTCGAAGTTTGATGAGGAATAGGGGGCAAATATAAGGGCCAAGTACCAACACCCAT
* ** * * *
16319460 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCAATGCTGTCGATCAGGT
261 CGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCACCGGAACCCAATGCCGCCGATCAAGT
* * * *
16319525 TCTCCGGCGATGGTGTCCTAGCGAAGAAAAATACGGCACCAGCACATGCCAGAGCCTAGCATGTG
326 TCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCAGAGCCCAACATGTG
* * * *
16319590 CTGCCGTAACCCTC-AGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCAAGATTCAA
391 CTGCCGCAACCCTCGA-TCCGGTACAATCTTAGACTGGGAATGAACTCCATATGCCAAGATTCAA
* * * *
16319654 AATTAAATCCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGTGCTCAACCGACCAGAGGG
455 AATGAAATACGTATGCCTAAGTCAACACACGAAACGAGCGTGCGGGCGCTCAACCGACCAGAGGG
* * * * * ** * *
16319719 GCGGGATGCGCAAGCCGGGGATCGGTCAGGTCTCGCTCTACGTGCTATTGATCCTGCTACTGCAA
520 GCGGGATACGCAAGCCGGGGATCGGCCAGGTCCCCCTCTACATGCTACCGATCCTACTACCGCAA
* * * *
16319784 CCCTTGATCCGATCCCATCTTTGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAACA
585 CCCTCGATCCGATCCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACA
*
16319849 AGCGGGCGGGTGGGCGGACACCACTTCGGCCAGAGAGGCGTGATCCTTGT
650 AACGGGCGGGTGGGCGGACACCACTTCGGCCAGAGAGGCGTGATCCTTGT
*
16319899 ATTTTTTTAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-T
1 ATTTTTTTAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGG-ATT
16319963 GCACAA-AAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
65 GCACAAGAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * * *
16320027 CACCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTTTTTAAGG
129 CACCATTTCAGACACTTTAATGACTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGA
** * * *
16320092 GGGTGTGAGTTCTTGAAGTTTGATGAGGAATATGGGGCAAATATAAGGGCCAAGTACCAGCACCC
194 GGGTACGAGTTCTCGAAGTTTGATGAGGAATAGGGGGCAAATATAAGGGCCAAGTACCAACACCC
*
16320157 ATCGCACATCATGTGCGCACACCCCCCGACTCCCCCGATCACCGGAACCCAATGCCGCCGATCAA
259 ATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCACCGGAACCCAATGCCGCCGATCAA
* * *
16320222 GTTCTCTGATGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCAGAGCCCAACATG
324 GTTCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCAGAGCCCAACATG
** *
16320287 TGCTGCCGCAACCCTCGATCCGGTATGATCTTAGACTGGGAATGAACTCCATATGCTAAGATTCA
389 TGCTGCCGCAACCCTCGATCCGGTACAATCTTAGACTGGGAATGAACTCCATATGCCAAGATTCA
* * * * * * *
16320352 GAATGAACTACGTATGCCTAAGTCAACACATGAAATGATCGTGCGGGCGCTCAATCGGCCAGAGG
454 AAATGAAATACGTATGCCTAAGTCAACACACGAAACGAGCGTGCGGGCGCTCAACCGACCAGAGG
* * * * *
16320417 GGCGGGATACGCAAGCCGGGGGTCGGCCGGGTCCCCCTCTGCATGCTGCCGATCCTACTGCCGCA
519 GGCGGGATACGCAAGCCGGGGATCGGCCAGGTCCCCCTCTACATGCTACCGATCCTACTACCGCA
* * * ** * *
16320482 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGGCTAAGCCAACCGACGAAGC
584 ACCCTCGATCCGATCCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
16320547 AAACGGGCGGG
649 AAACGGGCGGG
16320558 CAGGCGGGCG
Statistics
Matches: 579, Mismatches: 77, Indels: 6
0.87 0.12 0.01
Matches are distributed among these distances:
698 3 0.01
699 574 0.99
700 2 0.00
ACGTcount: A:0.27, C:0.25, G:0.25, T:0.23
Consensus pattern (699 bp):
ATTTTTTTAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGATTG
CACAAGAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCA
CCATTTCAGACACTTTAATGACTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGG
GTACGAGTTCTCGAAGTTTGATGAGGAATAGGGGGCAAATATAAGGGCCAAGTACCAACACCCAT
CGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCACCGGAACCCAATGCCGCCGATCAAGT
TCTCCGACGATGGTGTCCCAGCGAAGAAAAATACGGCACCAGCACATGCCAGAGCCCAACATGTG
CTGCCGCAACCCTCGATCCGGTACAATCTTAGACTGGGAATGAACTCCATATGCCAAGATTCAAA
ATGAAATACGTATGCCTAAGTCAACACACGAAACGAGCGTGCGGGCGCTCAACCGACCAGAGGGG
CGGGATACGCAAGCCGGGGATCGGCCAGGTCCCCCTCTACATGCTACCGATCCTACTACCGCAAC
CCTCGATCCGATCCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAA
ACGGGCGGGTGGGCGGACACCACTTCGGCCAGAGAGGCGTGATCCTTGT
Found at i:16321227 original size:26 final size:26
Alignment explanation
Indices: 16321191--16321241 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16321181 TCAGTCTGAT
*
16321191 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16321217 CTTAGATTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16321242 CCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16322107 original size:26 final size:26
Alignment explanation
Indices: 16322068--16322120 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16322058 CCGGTCCGAT
* *
16322068 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16322094 CTTAGACTATGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16322120 C
1 C
16322121 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16322636 original size:889 final size:887
Alignment explanation
Indices: 16319899--16327426 Score: 9965
Period size: 889 Copynumber: 8.5 Consensus size: 887
16319889 TGATCCTTGT
*
16319899 ATTTTTTTAGAAAG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
1 ATTTTTTCAG-AAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
*
16319963 GCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
65 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
16320028 ACCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTTTTTAAGGG
130 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * * * *
16320093 GGTGTGAGTTCTTGAAGTTTGATGAGGAATATGGGGCAAATATAAGGGCCAAGTACCAGCACCCA
195 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * *
16320158 TCGCACATCATGTGCGCACACCCCCCGACTCCCCCGATCACCGGAA-CCCAATGCCGCCGATCAA
260 TCGCACATCATGTGCGCACACCCCCCGGC-CCCCCGATCGCCGGAACCCCAATGCCGCAGGTCAG
* ** * * *
16320222 GTTCTCTGATGATGGTGTCCCGGCGAAGAAAAATACGGCACCAGCACATGCCAGAGCCCAACATG
324 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* ** * * * **
16320287 TGCTGCCGCAACCCTCGATCCGGTATGATCTTAGACTGGGAATGAACTCCATATGCTAAGATTCA
389 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * **
16320352 GAATGAACTACGTATGCCTAAGTCAACACATGAAATGATCGTGCGGGCGCTCAATCGGCCAGAGG
454 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * ** * * * *
16320417 GGCGGGATACGCAAGCCGGGGGTCGGCCGGGTCCCCCTCTGCATGCTGCCGATCCTACTGCCGCA
519 AGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCA
* ** * * *
16320482 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGGCTAAGCCAACCGACGAAGC
584 ACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA-C--CGATG-
* * * *** ** *
16320547 AAACGGGCGGGCAGGCGGGCGGGCACTACGCTATCCAGAGACACGGGATGCGCAAACCGTGGATC
645 AAACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* *
16320612 GATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGG
710 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
16320677 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
775 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** *
16320742 TTTATTTTTCACGATTTTCCAAA-----A-----C--G-TTTTCT---
840 TCTATTTTTCACGATTTTTAAAATTTTTACGGTTCGGGATTTTTTAAA
* * *
16320774 A---TTTCAGAAGTAGTTTTGGCCCCAAACTTGG-ATGATGTGATACTTGTATTTTTTTTGGCAT
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTA-GACGTGATCCTTGTATTTTTGTTGGCAT
*
16320835 GCACAAAAAAATTCAGCTAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
65 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
16320900 CCCATTTTAGACACTTTAATGTCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
130 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
16320965 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
195 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * * * * *
16321030 TCGCACATCGTGTCCGCACACCCCCCTCGACCCCCTCGATCGCTGGAAGCCCAATGACACCGGTC
260 TCGCACATCATGTGCGCACA-CCCCC-CGGCCCCC-CGATCGCCGGAACCCCAATGCCGCAGGTC
* *
16321095 AGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATATGGCACCAGCACATGCCTGAGCCCAGCA
322 AGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
** * * * * * * *
16321160 TGCCCTGTCGCAACCTTCGGTTCAGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGATT
387 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* *
16321225 GGGAATGAACTCCGTATCCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCACAGCCGGCCAGA
452 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * *
16321290 GGGGCGGGATGCACAAGCCAGGGATCAATCGGGT---CC-CT-C-T-CTA-CG----TGCTGCCG
517 GGAGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTG
* * * ** *
16321343 TAACCCTCAGTCCGATCTGATCTTAGACT-GCTAATGAACTCCGTATGCCTAAGCCAACCGATGA
582 CAACCCTCGGTCCGGTCCAATCTTAGACTAG-GAATGAACTCCGTATGCCTAAGCCAACCGATGA
* * * * *
16321407 AACAAGCAAGCGTGCAGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
646 AACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
16321472 ATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTT-TTCCATGCCAATGCCATTTTTCTGGC
711 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* * *
16321536 TTGTAAATTCATACAATGCTCCCTTAAGCCTTCAGGTGAAGTTTCATGGCAAGACAACTCGTTTT
776 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * *
16321601 TTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTCAAA
841 CTATTTTTCACGATTTTT-AAAATTTTTACGGTTCGGGATTTTTT-AAA
* * * *
16321650 ATTTTTTCAGAAGCAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGAATG
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
16321715 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATATCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
16321780 CCATTTCAGACACTCTATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
** * *
16321845 GTGTGAGTTCTCGACATTTGATGAGGGATAGGAGGCCAATTTAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
16321910 TGCACATCATGTGCGCACAACCCCCAGCCACCCCGATCGCCGAAACCCCAATGTCGCAGGTCAGG
261 CGCACATCATGTGCGCACACCCCCCGGCC-CCCCGATCGCCGGAACCCCAATGCCGCAGGTCAGG
* * * *
16321975 TTCTTCGGCGATGGTGTCCCGCCGAAGAAAAATACGACACCAGCACATGCTCGAGCCCAGCATGT
325 TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * **
16322040 GCGGCCGCAACTCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTATG
390 GCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* *
16322105 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCTGGCCAGAGGA
455 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGA
* * * *
16322170 GCGGGATGCGCAAGCCGGGGATCG-GCTGGGCCCCCCTCTACGTGCTACCAATCCTGCTGCTGCA
520 GCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCA
* *
16322234 ACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAG
584 ACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAC
* * * * * * *
16322299 GAGCTGGCGGGCGGGCGGGCACTACGCCAGCCATAAAGGTGGGATGCGCAAGCCGTGCATAGATA
649 GAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* * * * * ** * *
16322364 GGGTGATAGGTCGATTTAGGCAAATCTTCATATTTCTACTGTGCCAATGCCAGTTTTCTAGCTTG
714 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
16322429 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
779 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* *
16322494 TTTTTCAGGATTTTTGAAAATTTTTACGATTCGGGATTTTTTAAA
844 TTTTTCACGATTTTT-AAAATTTTTACGGTTCGGGATTTTTTAAA
* * * *
16322539 TTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACTTGATCCTCGTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
16322604 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
16322669 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * *
16322734 GTGTGAGTTCTCAACGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCATCAAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
16322799 CGCACATCATGTGCTCACACCCCCTGGCCCCACCGATCGTCGAAACCCCAATGTCGTC-GGTCAG
261 CGCACATCATGTGCGCACACCCCCCGGCCCC-CCGATCGCCGGAACCCCAATGCCG-CAGGTCAG
* *
16322863 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATG
324 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* *
16322928 TACTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGG
389 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
16322993 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCTGCCAGAGG
454 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * ** * *
16323058 GGCGAGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCT-ATCGT
519 AGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCT-GC
* * * * *
16323122 AACCCTCGGTCTGGTTCAATCTTAGATTGGGAATGAACTACGTATGCCTAAGCCAACCGATGAAA
583 AACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAA
* ** * * * *
16323187 CGAACAGGCAAGCTGGCGGGTACTACGCCAGCCAGAGAGGCGGGATGCACAAGCCGTGGATCGAT
648 CGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
** *
16323252 AAAGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
713 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* * * * *
16323317 CTAAATTCGTACAATGGTCCCTTTAGCCTTCATGTGAAGTTTCATGGCATGACGACTCGTTTTTT
778 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * *
16323382 ATTTTTCATGATTTTCTAAACTTTTTACGGTTCAGGATTTTTTAAA
843 ATTTTTCACGATTTT-TAAAATTTTTACGGTTCGGGATTTTTTAAA
* * * * *
16323428 ATTTTTTTAGAAGTTGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATA
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
16323493 CACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
**
16323558 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATATTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * * *
16323623 GTGTGAGTTCTCGAGCTTTGATGGGGGATAGGGGCCCAATATAAGGGCCAAGCACCAGCGCCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * ** * *
16323688 CGCACTTCATGTGCGTACACCCCCCTGGCCCCCCGATCATCGGAGCCCCAATGCCGCCGGTCAGG
261 CGCACATCATGTGCGCACACCCCCC-GGCCCCCCGATCGCCGGAACCCCAATGCCGCAGGTCAGG
* * * * *
16323753 TTCTCCGGTGATGGTGTCCCGATGAAGAAAATTATGGCACCAGCACATGCCTGAGCCCAAGCATG
325 TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC-AGCATG
* * * * *
16323818 TGCTGCCGTAACCCTCGGTCCGATCCGATCTTAGATTGGGAATGAACTCTGTATGCTTAGACTAG
389 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
16323883 GAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGTGCTCAAG-CGACCAGAG
454 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC-AGCCGGCCAGAG
* * * *
16323947 G-GTC-GGATGCGCAAGCCAGGGATCGATCAGGTCCCCCTCTGTGTGCTACTGATCCTGCTGCTG
518 GAG-CGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTG
* ** * * *
16324010 CAGCCCTCGGTCCAATCCAGTCTTAGACTAGGATTGAACTCCGTATGCCTAAGCCAACCGACGAA
582 CAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAA
* * * * * **
16324075 ACGAACGGGCGGGCGGGCGAGCGCTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCACGGATCGA
647 ACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* *
16324140 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAACGCCATTTTTTTGGCT
712 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
* * *
16324205 TGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATCGCAAGACGACTTGTTTTC
777 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * *
16324270 TATTTTTCATGATTTTCAAAACGTTTTACGGTTGGGGATTTTATAAA
842 TATTTTTCACGATTTTTAAAA-TTTTTACGGTTCGGGATTTTTTAAA
* * * * *
16324317 ATTTTTTCAGAAATATTTTTGGCCCCAAACTTGGTAGACATGATCCATGTATTTTTCTTGGCATG
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
16324382 CACAAAAAAATTCAACTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAGAA-TGTC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA-AAGTGTC
* * *
16324446 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCGGTAAAATCTCAAATGCACTTGAAGGG
130 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
16324511 GGTGTGAGTTCTCAAGGTTTGATAAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCA
195 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* ** * * *
16324576 TTGCACATCATGCCCGCATACCCCCCCGGCCCCCCGATCACCGGAACCCTAATGCCGTC-GGTCA
260 TCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCG-CAGGTCA
* * *
16324640 AGTTCTCCGGTGATGGTGTCCCGACGAAGAAAAATTA--ACACCAGCACATGCCCGAGCCCAGCA
323 GGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAA-TACGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * **
16324703 TGTGCTGCTGTAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCAAATGCTTAGACT
387 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * *
16324768 GGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCATGTGGGGGCTTAGCCGGCCAGA
452 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * *
16324833 GGGGCGAGATGCGTAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTACTGCCG
517 GGAGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTG
* * *
16324898 CAACCCTCGGTCTGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAA
582 CAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAA
* * *
16324963 AC--G-A-GCGGGCGGGCGGGCACTACGCCGACCAGAGTGGCGAGATGCGCAAGCCGTGGATCGA
647 ACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
*
16325024 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCT
712 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC-
*
16325089 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATCGCAAGACGACTCGTTTT
776 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * * *
16325154 CTATTTTTCACGATTTTCAAAACGTTTTACGGTTGGGGATTTTATAAG
841 CTATTTTTCACGATTTTTAAAA-TTTTTACGGTTCGGGATTTTTTAAA
*
16325202 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATG
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * **
16325267 CAC-AAAAAATTCAACTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAGTGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
16325331 CCATTTCAGACACTTTAATGGCTACTGGCAACAAACCAGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
16325396 GTGTGAGTTCTAGAGGTTTG-TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
16325460 CACACATCATGTGCGCACACCCCCCCGGCCCCCCAATCGCCGGAACCCCAATACCGCAGGTCAGG
261 CGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCAGGTCAGG
* * **
16325525 TTCTCCGGCGATGGTGTCCCAACGAAGAATAATGTGGCACCAGCACATGCCCGAGCCCAGCATGT
325 TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * *
16325590 GCTGCCGCAACCCTCAGTCCGGTTCGATGTTAGACTGGGAATAAACTCCGTATGCTTAGACTGGG
390 GCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * *
16325655 AATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGCG
455 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG-G
* * * * * * *
16325720 A-CGGGATTCGCAAGCCAGGGATC-AGTCGGGTCCCTCT-TCGCGTGCTGCTGATCCTGCTACCG
519 AGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCT-GCGTGCTACCGATCCTGCTGCTG
* * * *
16325782 TAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGGCAACCGATGAA
582 CAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAA
* * * * *
16325847 TCGAGCGGGCAGGCGAGCGGGCAGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGAA
647 ---A-CGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
* * ** * *
16325912 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTACTGTACCAATCCCATTTTTCT
708 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
* * *
16325977 GGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTTATGTGAAGTTTCATGGCAAGACGACTCAT
773 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
* * * * *
16326042 TTTTTATTTTTCACCATTTTCAAAAATTTTTACGGTTCGAGATTTTTTTAA
838 TTTCTATTTTTCACGATTTT-TAAAATTTTTACGGTTCGGGATTTTTTAAA
* * ** *
16326093 ATTTTTTCAAAAGGAGTTTTGGCCCCAAACTTATTAGACGGGATCCTTGTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * *
16326158 TACAAAAAAACTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGGAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * * *
16326223 CCATTTCAGACACTTTAATGGCTACTGGCAACAAACTTGCACATTCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
16326288 GTGTGAGTTCTCGAGGTTTGATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * * * *
16326353 CACACATCATGTGCACACACCACCCCCGCCCCCCCGATCACCGAAAGCCCAATGCCATC-GGTCA
261 CGCACATCATGTGCGCACA-C-CCCCCGGCCCCCCGATCGCCGGAACCCCAATGCC-GCAGGTCA
* ** * * *
16326417 GGATCTCCGGCGATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCTAGCAT
323 GGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAT
* * * *
16326482 GTGCTGCCGTAACCCTCGGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTTTGCTTAGACT-
388 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * * * *
16326546 GGAACGAACTCCATATGCCTACGTCAACCCACGATACGAGTGTGCGGGCGCTCAGTCGGCCA-AA
453 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * ** ** *
16326610 GAGGCGGGATGTGAAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACTAATCCTACTGCTG
518 GA-GCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTG
* * * * * *
16326675 CAACCTTCGATCTGGTCTAATCTTAGACT-GAGAATTAACTCCGTATGCCTAAGCCAACTGATGA
582 CAACCCTCGGTCCGGTCCAATCTTAGACTAG-GAATGAACTCCGTATGCCTAAGCCAACCGATGA
* * *
16326739 AATGAGC-GTGCGGGCAGGCGGGCACTACGCCGGCCAAAGAGGCGGGATGCGCAAGCCGTGGATC
646 AACGAGCAG-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* * *
16326803 GATAGGGTGTTAGGCGTGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
710 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* *
16326868 CTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTT
775 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * *
16326933 TCTATTTTTCATGATTTTTAAAACTTTTTATGGTTTGGGATTTTTTAAA
840 TCTATTTTTCACGATTTTTAAAA-TTTTTACGGTTCGGGATTTTTTAAA
* * * *
16326982 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTGGACGTGATCGTTATATTTTTGTTGGCATG
1 ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
16327047 CACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
16327112 CCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTTAATGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
16327177 GTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * * *
16327242 CGCACATCATGTGCGAATACCCCCCGGCCCCCCCGATTGCTGGAACCCCAATGTCGCCGGTCAGG
261 CGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCAGGTCAGG
* * *
16327307 TTCTCCGACGATGGTGTCCCGACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCTAGCATGT
325 TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * *
16327372 GATGCCGCCACCCTCGGTCTGGTTCGATTTTAGACTGGGAATGAACTCCGTATGC
390 GCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
16327427 CTAAGTTATC
Statistics
Matches: 5843, Mismatches: 716, Indels: 175
0.87 0.11 0.03
Matches are distributed among these distances:
858 104 0.02
859 92 0.02
860 4 0.00
862 2 0.00
863 56 0.01
864 1 0.00
867 2 0.00
868 2 0.00
869 2 0.00
870 1 0.00
871 7 0.00
872 257 0.04
873 9 0.00
874 14 0.00
875 206 0.04
876 2 0.00
877 225 0.04
878 7 0.00
879 252 0.04
880 3 0.00
881 2 0.00
882 3 0.00
883 127 0.02
884 494 0.08
885 175 0.03
886 2 0.00
887 125 0.02
888 276 0.05
889 2352 0.40
890 267 0.05
891 161 0.03
892 247 0.04
893 216 0.04
894 147 0.03
895 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (887 bp):
ATTTTTTCAGAAGTAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCAGGTCAGGT
TCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAG
CGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCAAC
CCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA
GCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGG
GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTA
AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCACGATTTTTAAAATTTTTACGGTTCGGGATTTTTTAAA
Found at i:16322993 original size:26 final size:26
Alignment explanation
Indices: 16322957--16323009 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16322947 CCGGTCCGAT
*
16322957 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16322983 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16323009 C
1 C
16323010 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16323885 original size:26 final size:26
Alignment explanation
Indices: 16323847--16323899 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16323837 CCGATCCGAT
* *
16323847 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
16323873 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCTGTATG
16323899 C
1 C
16323900 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCTGTATG
Found at i:16325648 original size:26 final size:26
Alignment explanation
Indices: 16325619--16325670 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
16325609 CGGTTCGATG
16325619 TTAGACTGGGAATAAACTCCGTATGC
1 TTAGACTGGGAATAAACTCCGTATGC
* *
16325645 TTAGACTGGGAATGAACTTCGTATGC
1 TTAGACTGGGAATAAACTCCGTATGC
16325671 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATAAACTCCGTATGC
Found at i:16325865 original size:12 final size:12
Alignment explanation
Indices: 16325848--16325872 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
16325838 ACCGATGAAT
16325848 CGAGCGGGCAGG
1 CGAGCGGGCAGG
16325860 CGAGCGGGCAGG
1 CGAGCGGGCAGG
16325872 C
1 C
16325873 ACTACGTCGG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.16, C:0.28, G:0.56, T:0.00
Consensus pattern (12 bp):
CGAGCGGGCAGG
Found at i:16329138 original size:26 final size:26
Alignment explanation
Indices: 16329088--16329139 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16329078 CAGTCTGATT
* **
16329088 TTAGATTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCATATGC
16329114 TTAGACTGGGAATGAACTCCATATGC
1 TTAGACTGGGAATGAACTCCATATGC
16329140 CTAAGACAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.15, G:0.25, T:0.31
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGC
Found at i:16329800 original size:12 final size:12
Alignment explanation
Indices: 16329783--16329813 Score: 62
Period size: 12 Copynumber: 2.6 Consensus size: 12
16329773 GAGGGATAGG
16329783 GGGCCAATATAA
1 GGGCCAATATAA
16329795 GGGCCAATATAA
1 GGGCCAATATAA
16329807 GGGCCAA
1 GGGCCAA
16329814 GTACCAGCAC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 19 1.00
ACGTcount: A:0.39, C:0.19, G:0.29, T:0.13
Consensus pattern (12 bp):
GGGCCAATATAA
Found at i:16330907 original size:26 final size:26
Alignment explanation
Indices: 16330871--16330922 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
16330861 CCGGTCTGAT
16330871 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
16330897 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16330923 TCTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16332414 original size:26 final size:27
Alignment explanation
Indices: 16332362--16332415 Score: 83
Period size: 26 Copynumber: 2.0 Consensus size: 27
16332352 CCGATCCGAT
*
16332362 CTTAGACTGGGAAATGCACTCCATATG
1 CTTAGACTGGGAAATGAACTCCATATG
*
16332389 CTTAGACTGGG-AATGAACTCCGTATG
1 CTTAGACTGGGAAATGAACTCCATATG
16332415 C
1 C
16332416 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
26 14 0.56
27 11 0.44
ACGTcount: A:0.28, C:0.22, G:0.24, T:0.26
Consensus pattern (27 bp):
CTTAGACTGGGAAATGAACTCCATATG
Found at i:16333059 original size:26 final size:26
Alignment explanation
Indices: 16333021--16333070 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
16333011 CCGATCCGAT
*
16333021 CTTAGACTGGGAATGAACCCCGTATG
1 CTTAGACTAGGAATGAACCCCGTATG
*
16333047 CTTAGACTAGGAATGAACTCCGTA
1 CTTAGACTAGGAATGAACCCCGTA
16333071 CGCCTAAGTT
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.22, G:0.24, T:0.24
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACCCCGTATG
Found at i:16333237 original size:658 final size:658
Alignment explanation
Indices: 16331976--16333242 Score: 1882
Period size: 658 Copynumber: 1.9 Consensus size: 658
16331966 CCCAAACTTC
*
16331976 GTAGACGTGATCCTTTTATTTTTGTTGGCATGCAAAAAAAAATTCAACTAAAAACTCGAAGTGAA
1 GTAGACGTGATCCTTTTATTGTTGTTGGCATGCAAAAAAAAATTCAACTAAAAACTCGAAGTGAA
* *
16332041 CAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTCTAGACACTTTAATGGCTACTGGCAGTA
66 CAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTCTAAACACTTTAATGGCTACTGGCAGCA
*
16332106 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
131 AACCTGTAAAACCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
16332171 GGCCAATATAAGGGTCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCACCCGGCCCC
196 GGCCAATATAAGGGCCAAGTACCACCACCCATCACACATCATGTGTGCACACCCCACCCGGCCCC
* * * * * *
16332236 CCCGATCGTCCGTACCCCAATACCGCCTGTCAGGTTCTCCAGTGATAGTGTCCCGGTAAGAAAAA
261 CCCGATCATCAGAACCCCAATACCGCCGGTCAAGTTCTCCAGTGATAGTGTCCCGGGAAGAAAAA
* * *
16332301 TGCAGCACCAGCACATGCCCGAGGCTAGCATGTGCTGTCGCAACCCTCGGTCCGATCCGATCTTA
326 TGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGATCCGATCCGATCTTA
* * * *
16332366 GACTGGGAAATGCACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
391 GACTGGGAAATGAACCCCATATGCTTAGACTAGGAATGAACTCCGTACGCCTAAGTCAACCCACG
* * * * *
16332431 AAACGAGCGTGCGGGCACTCAGCTGGCTAGAGGGGCGGCATGCGTAAGCCGACGATCAGCCGGAT
456 AAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCAGCATACGCAAGCCGACGATCAGCCGGAT
* * * * * * * *
16332496 CCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCTTCGGTCCGCTTCGATCTTAGATTGGGAA
521 CCCCCACTACGTACTGCCAATCCTGCTACCACAACCCTCGGTCCGCTTCGATCTTAGACTGAGAA
* *
16332561 GGAACTCCGTATGCCTAAGCCAACAAATAAAATTTTTAAAATTTTTTCGGATGGAGTTTTACCCC
586 GGAACTCCGCAAGCCTAAGCCAACAAATAAAATTTTTAAAATTTTTTCGGATGGAGTTTTACCCC
16332626 CAAGCCTG
651 CAAGCCTG
* *
16332634 GTAGACGTGATCCTTGTT-TTGTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGT
1 GTAGACGTGATCCTT-TTATTGTTGTTGGCATGCAAAAAAAAATTCAACTAAAAACTCGAAGTGA
*
16332698 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT-TCAAACACTTTAATGGCTACTGGCAG
65 ACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTCT-AAACACTTTAATGGCTACTGGCAG
16332762 CAAACCTGTAAAACCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
129 CAAACCTGTAAAACCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
16332827 GGGGCCAATATAAGGGCCAAGTACCACCACCCATCACACATCATGTGTGCACAACCCC-CCCGGC
194 GGGGCCAATATAAGGGCCAAGTACCACCACCCATCACACATCATGTGTGCAC-ACCCCACCCGGC
* * * * * *
16332891 CCCCCCGATCATCAGAACCCCAATGCCGTCGGTCAAGTTCTTCGGTGATGGTGTCCGGGCGAAGA
258 CCCCCCGATCATCAGAACCCCAATACCGCCGGTCAAGTTCTCCAGTGATAGTGTCCCGG-GAAGA
** * *
16332956 AAAATGTGGCACGAGCACATGCCCGAGCCCAGTATGTGCTGTCGCAACCCTCGATCCGATCCGAT
322 AAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGATCCGATCCGAT
* *
16333021 CTTAGACTGGG-AATGAACCCCGTATGCTTAGACTAGGAATGAACTCCGTACGCCTAAGTTAACC
387 CTTAGACTGGGAAATGAACCCCATATGCTTAGACTAGGAATGAACTCCGTACGCCTAAGTCAACC
*
16333085 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAAG-ATACGCAAGCCGACGATC-GT
452 CACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGC-AGCATACGCAAGCCGACGATCAG-
* * * * ** * *
16333148 CTGGGTCCCTCACTACGTACTGTCAATCCTGCTACCGTAACCCTCGGTCTG-GTCTGATCTTAGA
515 CCGGATCCCCCACTACGTACTGCCAATCCTGCTACCACAACCCTCGGTCCGCTTC-GATCTTAGA
*
16333212 CTGAGAATGAACTCCGCAAGCCTAAGCCAAC
579 CTGAGAAGGAACTCCGCAAGCCTAAGCCAAC
16333243 CAACGAAATG
Statistics
Matches: 542, Mismatches: 60, Indels: 14
0.88 0.10 0.02
Matches are distributed among these distances:
657 4 0.01
658 457 0.84
659 81 0.15
ACGTcount: A:0.27, C:0.27, G:0.24, T:0.23
Consensus pattern (658 bp):
GTAGACGTGATCCTTTTATTGTTGTTGGCATGCAAAAAAAAATTCAACTAAAAACTCGAAGTGAA
CAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTCTAAACACTTTAATGGCTACTGGCAGCA
AACCTGTAAAACCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
GGCCAATATAAGGGCCAAGTACCACCACCCATCACACATCATGTGTGCACACCCCACCCGGCCCC
CCCGATCATCAGAACCCCAATACCGCCGGTCAAGTTCTCCAGTGATAGTGTCCCGGGAAGAAAAA
TGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGATCCGATCCGATCTTA
GACTGGGAAATGAACCCCATATGCTTAGACTAGGAATGAACTCCGTACGCCTAAGTCAACCCACG
AAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCAGCATACGCAAGCCGACGATCAGCCGGAT
CCCCCACTACGTACTGCCAATCCTGCTACCACAACCCTCGGTCCGCTTCGATCTTAGACTGAGAA
GGAACTCCGCAAGCCTAAGCCAACAAATAAAATTTTTAAAATTTTTTCGGATGGAGTTTTACCCC
CAAGCCTG
Found at i:16333943 original size:26 final size:26
Alignment explanation
Indices: 16333914--16333966 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16333904 CCGATCCCAT
16333914 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16333940 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16333966 C
1 C
16333967 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16335636 original size:159 final size:159
Alignment explanation
Indices: 16335339--16335722 Score: 472
Period size: 159 Copynumber: 2.4 Consensus size: 159
16335329 GCCTAGCATG
*
16335339 TGCTGCCGT-AACCCTCAGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
1 TGCTGCC-TCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* *
16335403 ACCCACAAAATGAGCGTACGGGCACTCGACCGACCAGAGGGGCGGGATGTGCAAGCCAGGGATCG
65 ACCCACAAAATGAGCGTACGGGCACTCGACCGACCAGAGGGGCGAGATGCGCAAGCCAGGGATCG
* *
16335468 ACCAGGTCCCCTACTGCGTACTGTTGATCC
130 ACCAGGTCCCCCACTGCGTACTGTCGATCC
* * * * *
16335498 TGCTGCCTCAACCCTTAGTCTGGTCTGATCTTGGACTGGGAATTAACTTCGTATGCCTAAGTCAG
1 TGCTGCCTCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * **
16335563 CCCACGGAAA-GAGCGTGCGGGCGCTCGGTCGACCAGAGGGGCGAGATGCGCAAGCC-GGAGATC
66 CCCAC-AAAATGAGCGTACGGGCACTCGACCGACCAGAGGGGCGAGATGCGCAAGCCAGG-GATC
** * *
16335626 GGTC-GAGTCCCCCATTGCGTGCTGTCGATCC
129 GACCAG-GTCCCCCACTGCGTACTGTCGATCC
* * * * *
16335657 TGCTG-CTGCAACCCTCGGTTTGGTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCA
1 TGCTGCCT-CAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
16335721 AC
65 AC
16335723 TGACGAAACG
Statistics
Matches: 191, Mismatches: 29, Indels: 10
0.83 0.13 0.04
Matches are distributed among these distances:
158 6 0.03
159 182 0.95
160 3 0.02
ACGTcount: A:0.22, C:0.28, G:0.28, T:0.22
Consensus pattern (159 bp):
TGCTGCCTCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
CCCACAAAATGAGCGTACGGGCACTCGACCGACCAGAGGGGCGAGATGCGCAAGCCAGGGATCGA
CCAGGTCCCCCACTGCGTACTGTCGATCC
Found at i:16336425 original size:26 final size:27
Alignment explanation
Indices: 16336389--16336446 Score: 91
Period size: 26 Copynumber: 2.2 Consensus size: 27
16336379 CCGATCTGAT
*
16336389 CTTACACTGGGAATGAACTCTATATG-
1 CTTAGACTGGGAATGAACTCTATATGC
*
16336415 CTTAGACTGGGAATGAACTCTGTATGC
1 CTTAGACTGGGAATGAACTCTATATGC
16336442 CTTAG
1 CTTAG
16336447 TCAACCCATA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
26 24 0.83
27 5 0.17
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (27 bp):
CTTAGACTGGGAATGAACTCTATATGC
Found at i:16337712 original size:862 final size:861
Alignment explanation
Indices: 16334216--16340443 Score: 6220
Period size: 884 Copynumber: 7.1 Consensus size: 861
16334206 TGGTGGTAGG
* * *
16334216 TGGCCCCAAACTTCGTAGATGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAACTAA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* * *
16334280 AAACTTGAAGTGAACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCA-TTCTAGACACTTTAA
66 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAA
*
16334344 TGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
130 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * *
16334409 TGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCACACATCATGTGCGTAC
195 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG---CCATCGCACATCATGTGCGCAC
* * * ** * * *
16334474 ACCCCACCCGGCCCCCCCGATCGCCCGTACCCCAATATCGCCTGTCAGGTTCTCCGACGATGGTG
257 A-CCC-CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGACGATGGTG
* * * * * *
16334539 TCCCGGTGAAGAAAAATGCGGCACAAGCACATGCTCGAGCCCAGCATGTGCTG-CTGTAACCCTC
320 TCCCGGAGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC-GCAACCCTC
* * *
16334603 GGTCCGGTCCGATCTTGGACTGGGAAATGAACTCCATATGCTTAAACTAGGAATGAACTCCGTAT
384 GGTCC-G---G---TT---C--GG--AT---CT---TA-GATT----GA-GAATGAACTTCGTAT
* * * *
16334668 GCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCTGGCCAGAAGGGCGGGATGCGCAAG
423 GCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAG
* * * * *
16334733 CCGAGGATCGACCGGATCCCCCTCTGCATGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGCTC
488 CCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTC
* * * * *
16334798 CAATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGC-GTGCGGGCAG
553 TAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACAG-GCGGGCGG
* * ** * *
16334862 GCGGGCACTACGTCAGCCAGAGAGATGGGATGCGCAAGCCATTGATCGATAGGGTGGTAGGTGGG
617 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
16334927 TTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
682 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAAT
* *
16334992 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTT
747 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * *
16335057 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATCTTTTT-AGAAGGGGTTT
812 CGAAACTTTTTACGGTTCGGGATTTTTTAAAAT-TTTTTCAGAAGGAGTTT
* * * *
16335107 TGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTATTGGCAGGCACAAAAAAATTTAGCTAA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* * * * * * * ** * *
16335172 AAACTCAAAGTGT-C--G-----GGGGCCA----ATATAAGGGT--CAATCACACATCAATTT-A
66 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA-CACTTTAA
* *** * *** *** * * * * ** *
16335222 -CGCATACCCCCCGGCCCCCCCGATCGCCCGAA-CCCCAATAC-CGTGTGTCAGGTTGTACGGCG
130 TGGC-TA-CTGGCAG-CAAACC--T-G-TAAAATCTCAAATGCTC-T-T-TAAGGGGGT---GTG
* * ** * *** ** ** * * * *
16335284 ATGGTGTCCCGG--TGAAGAAAAATACAGCACCAAACACAAGCCCGAGCCTAGCATGT-GCTGCC
182 A-GTTCTCGAGGTTTGATGAGGGATAGGGGGCC-AATATAAG---G-GCC-A--A-GTACCAGCC
* * * * ** ** ** ** *** * * * *
16335346 GTAACCCTCAGTCTGATCTGATCTTA-GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACA
237 --ATCGCACA-TC--ATGTGCGCACACCCCCCGG---CCCCCCCG-AT-CGT-CG-GAACCC-C-
* * * * * * *** ** * *
16335410 AAATGAGCGTACGGGC-A-CTCGACCGACCAGA-GG-G--GCGG-GATGTGCAAGCCAGGGATCG
288 -AATG-CCGT-CGGTCAAGTTC-TCCGA-C-GATGGTGTCCCGGAGAAGAAAAATACA-GCA-CC
* ** * * * * * * * * ** * * *
16335468 ACCAGGTCCCCTACTGCGTACTGTTGATCCTGCTGCCTCAACCCTTAGTCTGG-TCTGATCTTGG
345 AGCACATGCCCGA--GC--CCAG--CAT-GTGCTGTCGCAACCCTCGGTCCGGTTCGGATCTTAG
* * * * * * *
16335532 ACTGGGAATTAACTTCGTATGCCTAAGTCAGCCCACGGAAA-GAGCGTGCGGGCGCTCGGTCGAC
403 ATTGAGAATGAACTTCGTATGCCTAAGTCAACCCAC-GAAATGAGCGTGCGGGCGCTCAGCCGGC
* * *
16335596 CAGAGGGGC-GAGATGCGCAAGCCG-GAGATCGGTCGAGTCCCCCAT-TGCGTGCTGTCGATCCT
467 CAGAGGGGCAG-GATGCGCAAGCCGAG-GATCGATCGGGTCCCCC-TCTGCGTGCTGCCGATCCT
* ** *
16335658 GCTGCTGCAACCCTCGGTTTGGTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAC
529 GCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
16335723 TGACGAAACGAGCAGGCGGGCGGGCGGGCATTACACCGACCAGAGAAGCGGGATGCGCAAGCCGT
594 CGACGAAACGAACAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* *
16335788 GGATCGATAGGGTGGTAGGTGCGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTT
659 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
*
16335853 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
724 TCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * * * * * *
16335918 TGTTTTCTATTTTTCAAGATTTTCAAAACATTTCACGGTTCGAGA-TTTTTCAAATTTTTTCAGA
789 CGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
*
16335982 AGGACTTT
854 AGGAGTTT
* * *
16335990 TGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCATAAAAACATTCAGCTAA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
16336055 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
66 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * *
16336120 GGCTACTGGTAGCAAACCTGCAAAATATCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
131 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * *
16336185 GATTAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCATATCATGTGCCCACA
196 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG---CCATCGCACATCATGTGCGCACA
* * * * * *
16336250 CCCCCCGGGGCCCCCCGATAGTCGAAACCCCAATGCC-TCAGTCGAGTTGTCCGACGATGGTGTC
258 CCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGACGATGGTGTC
* ** * * *
16336314 CCGGGGAAGAAAAATAC-GACACCAGCACATGCCCGAGCATAGCATGTGCTATCGTAACCATCGG
322 CCGGAGAAGAAAAATACAG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGG
*
16336378 TCCGATCTGATCTTACACTGGGAATGAACTCTATATGCTTAGACTGGGAATGAAC-TCTGTATGC
386 TCCG----G---TT---C---G---G-A-TCT-TA-GATT-GA----GAATGAACTTC-GTATGC
* ** ** * * *
16336442 CTTAGTCAACCCATAAAACAAAGCGTGCGGGAGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGT
425 CTAAGTCAACCCACGAAA-TGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGC
* * * * * * * *
16336507 CGAGGATCGATCGGGTCTCCCTCTGCTTGCTGCCAATCTTGCTGCCGTAACCCTCGATCCGATCC
489 CGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCT
* *
16336572 AATCGTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG---A-----GTGGGC
554 AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACAGGCGGGCGGGC
*
16336629 GGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
619 GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * *
16336694 TAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTGTAGCTTGAAAATTCATAGAATGG
684 TAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGG
* * * * *
16336759 TCCCTTAAGCCATCCTGTGATGTTTCATGGCAACACGACTCGTTTTCTATTTTTCATGATTTTCG
749 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG
** * *
16336824 AAACTTTTTATAGTTCGGTATTTTTTAAAATTTTTTCAGAAGGTGTTT
814 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
*
16336872 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCACAAAAAAATTCAGCTA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
16336937 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
65 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
16337002 TGGCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTCCTCGAGGTT
130 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* *
16337067 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCCATCGTACATCATGTGTGCACACC
195 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCCATCGCACATCATGTGCGCACACC
* *
16337132 CCCCGGCACCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAAGTTCTCCCACGATGGTGTCCC
260 CCCCGGC-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGACGATGGTGTCCC
* * * *
16337197 GGAGAAGAAAAATGCAGCACCAGCACATGCCCGAGCACAGCATGTGCTGTCACAACCCTAGGTCC
324 GGAGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCC
*
16337262 GGTTC-GATCTTAGATTGAGAATGAATTTCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGG
389 GGTTCGGATCTTAGATTGAGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGG
** * * ** * * *
16337326 GCGCTCAGCCGGCCAGAGGGGTGGGATACACAAATCGGGGATCGACCGGGTCCCCCTTTGCGTGC
454 GCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGC
** * * * *
16337391 TGTGGATCCTGCTGCCGTAACCCTGGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
519 TGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGC
* * * *
16337456 CTAAGCCAATCGACAAAACGAAC-GAGAGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGAT
584 CTAAGCCAACCGACGAAACGAACAG-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGAT
* * * * *
16337520 GCGCAAGCCATGGATCGATAGGGTAGTAGGTGGGTTTTGGCACATCTTCATATTTTTGCCGTGCC
648 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCC
* *
16337585 AATACCATTTTTCTAGCTTGTAAATTCATACAATAGTCCCTTAAGCCTTCATGTGAAGTTTCATG
713 AATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATG
*
16337650 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
778 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAA
**
16337715 ATTTTTTCAGAAGGAACTT
843 ATTTTTTCAGAAGGAGTTT
* * *
16337734 TGGCCCCAAACATGGTAGACGCGATCCTTGTATCTTTT-TTGGCATTCACAAAAAAATTCAGCTA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
16337798 AAAATTCGAAGTGTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
65 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
16337863 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCTTGAGGTT
130 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* *
16337928 TGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCCCATCATGTGCGCAC
195 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG---CCATCGCACATCATGTGCGCAC
* * *
16337993 ACCCCCCGGCCCCCCTCGATCGCCGGAACCCAAATGCCGTCGGTCAGGTTCTCC-AGCGATGGTG
257 ACCCCCCGGCCCCCC-CGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGA-CGATGGTG
* * * *
16338057 TCCC-GACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCGCAACACTC
320 TCCCGGA-GAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTC
* * * * *
16338121 GGTCCGATCCAATTTTAGACTGGGAATGAACTTCATATGCTTAGGCTGGGAATAAACTCCGTATG
384 GGTCCG-------GTT---C--GG-AT---C-T--TA-G---A--TTGAGAATGAACTTCGTATG
* * * * **
16338186 CCGAAGTCAACCCACGAAATGAGCGTGTGGGCACTCAGCCAAG-CAGAGGGGTGGGATGCGCAAG
424 CCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCC-GGCCAGAGGGGCAGGATGCGCAAG
* * * *
16338250 CCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTC
488 CCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTC
* * *
16338315 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAC-AAGCAGGTGGGCGG
553 TAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAA-CAGGCGGGCGG
16338379 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
617 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16338444 TTTAGGCACGTCTTCATATTTCTACCATGCCAATGCCATTTTTCTAGCTCGTAAATTCATACAAT
682 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAAT
*
16338509 GGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
747 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * *
16338574 CAAAACTTTTTACAGTTCGGGATTTTTTAAAACTTTTTC---AGGAGTTT
812 CGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * * *
16338621 TGGCCTCAAACTTGCTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
16338686 AAACTCGAAGTGTACAAGATTTTGTGACCATTT-AAAAAAGTGTCCCCATTTCAGACACTTTAAT
66 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* *
16338750 GGCTACTGGCAGCAAACCTGTAAAATCTCAAGTGCTCTTAAAGGGGGTGTGAGTTCTCGAGGTTT
131 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
*
16338815 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAAACATCGCACATCACT-TGTGCAC
196 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC---CATCGCACATCA-TGTGCGCAC
* ** * * * *
16338879 ACCCCCCGG-CCCCCCAATCACCGGAACCCCAATACCGTCGATTAGGTTCTCCGACGATGGTG-C
257 ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGACGATGGTGTC
* * * * * *
16338942 CTCGGAGAAGAAAAATACGGCACCAGCACATGCTCAAGCCCAGCAAGTGCTATCGTAACCCTCGG
322 C-CGGAGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGG
* * * * * *
16339007 TCTGGTTC-GATCTTCGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTA
386 TCCGGTTCGGATCTTAGATTGAGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCGTG
* * * * *
16339071 CGGGTGATCAGCCGGCCAGAGGGGCAAGATACGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCA
451 CGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCG
* * * * * *
16339136 TGCTGCCAATCCTACTACCGCAACCCTTGG-CCTAGT-TCAATCTTAGACTGGGAATGAACTTCG
516 TGCTGCCGATCCTGCTGCCGCAACCCTCGGTCC-GGTCT-AATCTTAGACTGGGAATGAACTCCG
* *
16339199 TATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGG-G
579 TATGCCTAAGCCAACCGACGAAACGAACAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCG
* * *
16339263 GGATGCGCAAGCCGTGGATCGGTAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCCG
644 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
*
16339328 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
709 TGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* **
16339393 CATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTTAAACTTTTTACGGTTCGGGATTTTT
774 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTT
16339458 TAAAATTTTTTCAGAAGGA-TTGT
839 TAAAATTTTTTCAGAAGGAGTT-T
* * *
16339481 TGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCACGCACAAAAACATTCAGCTAA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
*
16339546 AAACTC-AATGTGTACAAGATTGTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
66 AAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * * *
16339610 TTGCTACTGGTAGCAAACCTGTAAAATCTCAAAGGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
130 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
16339675 TAATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCACAC
195 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC---CAGCCATCGCACATCATGTGCGCAC
* * * **
16339740 ACCCGCCCCCCCGACCACCCCCCGATCGTCGAAACCCCAATGCTGTCGGTC-AGATTAACCGACG
257 A-----CCCCCCG-GC-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAG-TTCTCCGACG
* * * * *
16339804 ATGGAGTCCC-GACAAAGAAAAATACAGCACCAGCAAATGCCCAAGCCCAGCATGTGCTGCCGCA
314 ATGGTGTCCCGGA-GAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCA
*
16339868 ACCCTCGGTCCGG-TCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAAAGAACT
378 ACCCTCGGTCCGGTTCGGATCTTAGATT--G-A-G-A------ATG---A-ACT----------T
* * * *
16339932 CAGTATGGCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCATAGGGGCAGGATG
418 C-GTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATG
* * * * *
16339997 CGCAAGCCGGGGGTCGGTTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGT
482 CGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGT
* * * * * *
16340062 CCGGTCTAATCTTAGTCTGGGAATGAACTCCGTATGGCTAAGCCAATCGATGAAACGAGCGGGCG
547 CCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACAGGCG
* * * * * *
16340127 GGCAGGCGGGCGAGCGCTACACCGACGAGTGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTG
612 GGCGGGCGGGC-A---CTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTG
*
16340192 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAAT
673 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAAT
* *
16340257 TCATAGAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTCCTATTTTT
738 TCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * * *
16340322 CATGATTTTTGAAACTTTTTACGGTCCGGTATTTTTTAAAATTTTTTCAGAAGGAGTTT
803 CACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT
* * * *
16340381 TGGCCCCAAACTTGGCAGATGTGATTCTTGTA---TTGTTGGCATGTACAAAAAAAATTCAGCTA
1 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTA
16340443 A
65 A
16340444 TGGCTACTTT
Statistics
Matches: 4428, Mismatches: 661, Indels: 489
0.79 0.12 0.09
Matches are distributed among these distances:
854 134 0.03
855 28 0.01
856 2 0.00
857 199 0.04
858 203 0.05
859 7 0.00
860 97 0.02
861 331 0.07
862 275 0.06
863 12 0.00
864 137 0.03
865 2 0.00
866 11 0.00
867 9 0.00
868 12 0.00
869 116 0.03
870 13 0.00
871 11 0.00
872 1 0.00
873 7 0.00
874 6 0.00
875 1 0.00
876 2 0.00
877 11 0.00
878 15 0.00
879 15 0.00
880 71 0.02
881 284 0.06
882 66 0.01
883 300 0.07
884 476 0.11
885 21 0.00
886 168 0.04
887 116 0.03
888 45 0.01
889 143 0.03
890 404 0.09
891 56 0.01
892 35 0.01
893 5 0.00
894 9 0.00
895 188 0.04
896 15 0.00
897 30 0.01
898 20 0.00
899 15 0.00
900 234 0.05
901 6 0.00
902 7 0.00
903 6 0.00
904 13 0.00
905 7 0.00
906 8 0.00
907 3 0.00
908 2 0.00
910 3 0.00
911 14 0.00
912 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.25, T:0.25
Consensus pattern (861 bp):
TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCCATCGCACATCATGTGCGCACACCC
CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGACGATGGTGTCCCGG
AGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGG
TTCGGATCTTAGATTGAGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGC
GCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTG
CCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCT
AAGCCAACCGACGAAACGAACAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCG
CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
GCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
AGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
TTTTCAGAAGGAGTTT
Found at i:16338185 original size:26 final size:26
Alignment explanation
Indices: 16338135--16338186 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
16338125 CGATCCAATT
* *
16338135 TTAGACTGGGAATGAACTTCATATGC
1 TTAGACTGGGAATAAACTCCATATGC
* *
16338161 TTAGGCTGGGAATAAACTCCGTATGC
1 TTAGACTGGGAATAAACTCCATATGC
16338187 CGAAGTCAAC
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATAAACTCCATATGC
Found at i:16339916 original size:26 final size:26
Alignment explanation
Indices: 16339887--16339938 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
16339877 CCGGTCTGAT
* * *
16339887 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCAGTATG
16339913 CTTAGACTGGGAAAGAACTCAGTATG
1 CTTAGACTGGGAAAGAACTCAGTATG
16339939 GCTAAGTCAA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.15, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCAGTATG
Found at i:16342468 original size:26 final size:26
Alignment explanation
Indices: 16342428--16342480 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16342418 CCGATTTGAT
* * *
16342428 CTTAGACTGGTAATGAACTTCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
16342454 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
16342480 C
1 C
16342481 CTAAATTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:16343319 original size:888 final size:882
Alignment explanation
Indices: 16340830--16346411 Score: 6621
Period size: 840 Copynumber: 6.4 Consensus size: 882
16340820 GGGGATCGGT
* *
16340830 CGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCAA
1 CGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
16340895 AGCCAACTGACGAAACGA----GCGGGCGGGCGGGCACTACGTCGAG-CAGAGAGACGGGATGCG
66 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG-CCAGCCAGAGAGGCGGGATGCG
* * * *
16340955 CAAGCCGTAGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCGCCGTGCCAAT
130 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
*
16341020 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTGTCATGGCA
195 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * ** *
16341085 ATACGACTCGTTTTCTATTTTTCACAATTTTTTAAACTTTTTACGGTTTGAGATTTTTTAAAATT
260 AGACGACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATT
* * * * *
16341150 TTTTCAGAAGGAGTTTTGGCCCCTAACCTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGTAC
325 TTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCAC
* * * *
16341215 AAAAAAATTCAGCAAAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAGGTGTCCCT
390 -AAAAAATTCAGC-TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
16341280 ATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
453 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
16341345 GTAAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCA
518 GTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * ** * *
16341410 TACATCATTTGCGCACACCCCCTCGGGTCCCCCGATTGTCGGAACCCAAATGCCGCCGGTCAGGT
582 CACATCATGTGCGCACA-CCCCTCAGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* * ** *
16341475 TCTTCGACGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCA--TG
646 TCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTG
* ** *
16341538 -TGC-T-A--C-C-G--CAG-C--TCTCGGTCT-GG--T---CT-G-ATCTTAGACTGGGAATGA
711 CTGCGTAACCCTCGGTCCGGTCAATCTTAGACTGGGAATGAACTCGTATCTTAGACTGGGAATGA
* * * *
16341583 ACACTGTATGCCTAAGTCAA-CCACGAAACGAGCGTGCGAGCACTCAGCCGGCCAGAGGGGCGGG
776 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
** * * *
16341647 ATGCGCAAGCCAGTGTTCGATCGGGTCCCCCTCTGCGTGCTGT
841 ATGCGCAAGCTGGGGATCGA-CGGGTCCCCCTCTGCGTGCTGC
* * *
16341690 CGATCTTGCTACCGCAACCTTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * ** * *
16341755 AACTAACCGACGAAATGAGCGGGCGGTTGGG-TGGCACTACGCCGGCCAGAGAGGCGGGATGC-C
66 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGC
* * *
16341818 TAAGCCGTGGAACGATAGGGTGGTAGGTGGGTTTAGGCATATCTTCATATTT-TTCCATGCCAAT
131 -AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
* *
16341882 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTAATGAGAAGTTTCATGGCA
195 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
*
16341947 AGACGACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
260 AGACGACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATT
* *
16342012 TTTTCAGAAGGATTTTTGGCTCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCAT
325 TTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGC--
* *
16342077 AAAAAAAATTCAGCTAAAAACTCGAAGAGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
388 ACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * **
16342142 ATTTCAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAACAGGGT
453 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
16342207 GTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATAGAAGGGCCAAGTACCAGCACCCATCG
518 GTGAGTTCTCGAGGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
16342272 CACATCATGTGCGCACACCCCGCAGCCCCCCCAATCGCCGGAACCCCAATACCGCAGGTCAGGTT
582 CACATCATGTGCGCACACCCCTCAGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
*** *
16342337 CTCCGGCGATGGTGTCCCGACAAAGAAAAATATGACACCAGCACATGCCCGAGCCCAGCATGTGC
647 CTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGC
** * * ** * *
16342402 TGCCACAACTCTCGGTCCGATTTGATCTTAGACTGGTAATGAACTTCGTATGCTTAGAATGGGAA
712 TG-CGTAACCCTCGGTCCG-GTCAATCTTAGACTGGGAATGAAC-TCGTAT-CTTAGACTGGGAA
* * *
16342467 TGAACTCCGTATGCCTAAATTAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
773 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * *
16342532 GGGATGCGCAAGCTGGGGATCGGACGGGCCCCCCTCTACGTGCTAC
838 GGGATGCGCAAGCTGGGGATC-GACGGGTCCCCCTCTGCGTGCTGC
* * *
16342578 CGATCCTGCTACCGCAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAACTTCGTATGCCTA
1 CGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
16342643 AGCCAACCGACGAAAGGAGCTGACAGACGGGCGGGCACTACGCCAGCCAGAGAGGCGAGATGCGC
66 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGC
* * * * * * *
16342708 AAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAAATCTTCATATTTTTGTCGTTCCAACG
131 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
* * *
16342773 CCAGTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTAATGAGAAGTTTCATGGCAA
196 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* * *
16342838 GACGACTCGTTTTCTATTTTTCACGATTTTGAAAAATTTTTACGGTTCGGGATATTTTAAAATTT
261 GACGACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTT
* * ** *
16342903 TTTCAGATGGATTTTTGATCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCATA
326 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACA
*
16342968 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
391 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
16343033 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTG
456 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
16343098 AGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
521 AGTTCTCGAGGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
16343163 ATCATGTGCGCACACCCCTCAGCCCCCCCGATCGTCGGATCCCCAATGCCGCAGGTCAGATTCTC
585 ATCATGTGCGCACACCCCTCAGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * ** *
16343228 CGGCAATGGTGTCCTGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGTATGTGCTGC
650 CGGCGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTG-
*
16343293 CGTAACCCTCAGTCCGGTCAGATCTTAGACTGGGAATG-A-----A-CTT---C-------G---
714 CGTAACCCTCGGTCCGGTCA-ATCTTAGACTGGGAATGAACTCGTATCTTAGACTGGGAATGAAC
* * * * * * *
16343338 --C--ATGCCTAAGTCAACCCACGAAACGAGCATGCGGGAGCTCAGGCGACCAGAAGGCCGAGAT
778 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
*
16343399 GCGCAA------G-TCG--GGG-------AT-CG-G-T--
843 GCGCAAGCTGGGGATCGACGGGTCCCCCTCTGCGTGCTGC
* * * * *
16343418 CGATCCTGCTGCCGTAACCCTCGGTACGGTCTGATCTTAAACTGGGAATGAACTCCGTATGCCAA
1 CGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
16343483 AGCCAACTGACGAAATGAGCGGGTGGGTGGGCGGGCATTACGCCGAG-CAGAGAGGCGAGATGCG
66 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCC-AGCCAGAGAGGCGGGATGCG
* **
16343547 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCCACCATGCCAAT
130 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
*
16343612 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTGTCATGGCA
195 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * ** *
16343677 ATACGACTCGTTTTCTATTTTTCACAATTTTTTAAACTTTTTACGATTCGAGA-TTTTTAAAATT
260 AGACGACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAA-T
*
16343741 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
324 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCA
* * *
16343806 CAAAACAATTCACCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGTAAAAAGTGTCCCC
389 CAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
16343871 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGT
453 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
16343936 ATGAGTTCTCAAGGTTTGATGAGGGATAAGGGGCCAAGATAAGGGCCAAGTACCAGCACCCATCG
518 GTGAGTTCTCGAGGTTTGATGAGGGAT-AGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
16344001 CACATCATGTGCGCACACCCC-CCGACCCCCCTGATCATCGGAACCCCAATGCCGCCGGTTAGGT
582 CACATCATGTGCGCACACCCCTCAG-CCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* * * *
16344065 TCTCCAGTGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAGTG
646 TCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTG
* * * * *
16344130 CTGTCGCAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCATGTGCTTAGAATGGGA
711 CTG-CGTAACCCTCGGTCCGGT-CAATCTTAGACTGGGAATGAACT-CGTAT-CTTAGACTGGGA
* * * * *
16344195 ATGAACTCGGTATGCCTAAGTCAA-CCATGAAACGAGCGTGCGGGCGTTCAGTCGACCAGAGGGG
772 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * *
16344259 CGGGATGCACAAGTTGGGGATCGGCCGGGTCCCCTTCTGCGTGCTGC
837 CGGGATGCGCAAGCTGGGGATC-GACGGGTCCCCCTCTGCGTGCTGC
* * * * * * **
16344306 CGATCCTGCTGCTGTAACCTTCGGTCTGGT-TCGATCTTATA-TTAGAATGAACTCCGTATGCCT
1 CGATCCTGCTACCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * * *
16344369 AAGCCAACCGATGAAACGAGCGAGCGGGC---C-GACACTATGTCGGCCAGAGAGGCGGGATGCC
65 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCG
* * * * *
16344430 CAAGCCATGGATCAATAAGGTGCTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAAT
130 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT
* * **
16344495 ACCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGAAA
195 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * * *
16344560 AG-CTGACTCATTTTTTATTTTTCACGATTTTCAAAACTTTTTAAGGTTC-AGGATTTTTTAAAA
260 AGAC-GACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGA-GATTTTTTAAAA
* * *
16344623 TTTTTTCATAAAGAGTTTTGGCACCAAACCTT-GTAG-TCGTGATCCTTGTATTTTTGTTGGCAT
323 TTTTTTCAGAAGGAGTTTTGGCCCCAAA-CTTGGTAGAT-GTGATCCTTGTATTTTTGTTGGCAT
* *
16344686 GCGCAAAAAGATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
386 GCACAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
16344751 CCCACTTT-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
450 CCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * *
16344815 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCGAGTACTAGCACCC
514 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG-GCCAATATAAGGGCCAAGTACCAGCACCC
* * * * *
16344880 ATCGCACATCATGTGCG--CA-----CA--CCCCCCGATTGTCGGAAGCCTATTGCCACCGGTCA
578 ATCGCACATCATGTGCGCACACCCCTCAGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCA
* * * *
16344936 GGTTCTCTGGTGATGGTGTCCCGGTGAAGAAAAATGCAACACCAGCACATGCCCGAGCCCAGCAT
643 GGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCAT
**
16345001 GTGCTGGCGTAACCCTCGGTCCGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
708 GTGCT-GCGTAACCCTCGGTCCGG-TCAATCTTAGACTGGGAATGAACT-CGTAT-CTTAGACTG
* * * *
16345066 GGAATCAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCAGCCAGAG
769 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * *
16345131 GGGCGGGATGCGTAAG-TCGAGGATCGACCGAGTCCCCCTCTGCATGCTGC
834 GGGCGGGATGCGCAAGCT-GGGGATCGA-CGGGTCCCCCTCTGCGTGCTGC
* * * * * *
16345181 CGATCCTGCTACCAG-AACCCTTGGTCCGGTTTGATCTTTGACTGGGAATTAACTCTGTATGCAT
1 CGATCCTGCTACC-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * ** * * *
16345245 AAGCCAACGGACGAAACAAGCTAGCGGGCGTGCGGGCACTACGCC-GTCCAGAGAGACGGGATAC
65 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAG-CCAGAGAGGCGGGATGC
* *
16345309 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTGCCAA
129 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAA
16345374 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
194 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
** *
16345439 AAGACGACTCGTTTTCTATTTTTCACGATTTTCCAAA------A-----C--G-TTTTCT---A-
259 AAGACGACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAAT
** * * * * *
16345486 --TTTCAGAAATAGTTTTGGCCCCAAACTTGGTTGACGTGATACTTGTATTTTTTTTGGCATCCA
324 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCA
* *
16345549 CAAAAAAATTCAACTAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
389 C-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
16345614 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAACATCTCAAATGCTCTTTAAGGGGGT
453 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * *
16345679 GTGAGTTCTCGAGGATTGATGAGGGATAGGGGGCCAATATACGGGACAAGTACCAGCACCCATTG
518 GTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * **
16345744 CACATCATGTCCGCACACCCCCCTC-GACCCCCTCGATCG-CTGCAAGCCCAATGACATCGGTCA
582 CACATCATGTGCGCACA--CCCCTCAG-CCCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCA
* * * * *
16345807 GGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACAGGCCTGAACCCAGCA-
643 GGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCAT
* *
16345871 ----T--G---CCCT--GT-C-AT-AACCTT---C--GG--T---CT-G-ATCTTAGACTGGGAA
708 GTGCTGCGTAACCCTCGGTCCGGTCAATCTTAGACTGGGAATGAACTCGTATCTTAGACTGGGAA
* * *
16345910 TGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGC
773 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
*** * * *
16345975 GGGATGCGCAAGCCAAGGATCGGTCGGGTCCCCTTCTGTGTGCTGC
838 GGGATGCGCAAGCTGGGGATC-GACGGGTCCCCCTCTGCGTGCTGC
* * * **
16346021 GGATCCTGCTACCGTAACCCTCGGTACGGTCTGATCTTAGACTGCTAATGAACTCCGTATGCCTA
1 CGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
16346086 AGCCAATCGACGAAACAAGCGGGTGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATACGC
66 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGC
* *
16346151 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTGCCATGCCAATG
131 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
* * * *
16346216 CCATTTTTCTAGCTTGTAAATTCATACATTGGTCCCCTAAGTCTTCATGTGAAGTTTCATGGCAA
196 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* * * *
16346281 GACGACTCATTTTCTATTTGTCACGATTTTTGAAAA-TTTTTACAGTTCGAGATTTTTTTAAAAG
261 GACGACTCGTTTTCTATTTTTCACGA-TTTTGAAAACTTTTTACGGTTCGAGA-TTTTTTAAAAT
* * * *
16346345 TTTTTCAGAAGCAGTTTTGACCCCAAACTTGGTAGACT-TGATCCTTGTATTTTTATTGGAATGC
324 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA-TGTGATCCTTGTATTTTTGTTGGCATGC
16346409 ACA
388 ACA
16346412 TTTCAGACAC
Statistics
Matches: 4085, Mismatches: 474, Indels: 326
0.84 0.10 0.07
Matches are distributed among these distances:
839 9 0.00
840 698 0.17
841 334 0.08
842 8 0.00
843 1 0.00
844 4 0.00
845 1 0.00
846 1 0.00
847 1 0.00
849 2 0.00
850 3 0.00
851 2 0.00
852 3 0.00
853 1 0.00
854 5 0.00
855 8 0.00
856 1 0.00
857 1 0.00
858 3 0.00
859 6 0.00
860 313 0.08
861 155 0.04
862 426 0.10
863 87 0.02
864 11 0.00
865 1 0.00
866 49 0.01
867 15 0.00
869 4 0.00
870 2 0.00
871 82 0.02
872 1 0.00
873 3 0.00
874 169 0.04
875 102 0.02
876 47 0.01
877 7 0.00
878 1 0.00
879 5 0.00
880 175 0.04
881 4 0.00
882 8 0.00
883 427 0.10
884 19 0.00
885 2 0.00
886 3 0.00
887 76 0.02
888 527 0.13
889 78 0.02
890 194 0.05
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (882 bp):
CGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGGCGGGATGCGC
AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATG
CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
GACGACTCGTTTTCTATTTTTCACGATTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTT
TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACA
AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
AGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
TCATGTGCGCACACCCCTCAGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
GGCGATGGTGTCCCGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCG
TAACCCTCGGTCCGGTCAATCTTAGACTGGGAATGAACTCGTATCTTAGACTGGGAATGAACTCC
GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCG
CAAGCTGGGGATCGACGGGTCCCCCTCTGCGTGCTGC
Found at i:16345060 original size:26 final size:26
Alignment explanation
Indices: 16345031--16345083 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16345021 CCGGTTTGAT
*
16345031 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
16345057 CTTAGACTGGGAATCAACTCTGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
16345083 C
1 C
16345084 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:16346275 original size:840 final size:836
Alignment explanation
Indices: 16343418--16346411 Score: 3162
Period size: 883 Copynumber: 3.4 Consensus size: 836
16343408 GGGGATCGGT
* * *
16343418 CGATCCTGCTGCCGTAACCCTCGGTACGGTCTGATCTTAAACTGGGAATGAACTCCGTATGCCAA
1 CGATCCTGCTACCGTAACCCTCGGT-CGGT-TGATCTTAGACT--GAATGAACTCCGTATGCCTA
** * * * * *
16343483 AGCCAACTGACGAAATGAGCGGGTGGGTGGGCGGGCATTACGCCGAG-CAGAGAGGCGAGATGCG
62 AGCCAAC-GACGAAACAAGC--G-GGGCGGGCGGGCACTACGTC-AGCCAGAGAGGCGGGATACG
* * *
16343547 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCCACCATGCCAAT
122 CAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAAT
*
16343612 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTGTCATGGCA
187 GCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
* * * * * *
16343677 ATACGACTCGTTTTCTATTTTTCACAATTTTTTAAACTTTTTACGATTCGAGATTTT-TAAAATT
252 AGACGACTCATTTTCTATTTTTCACGA-TTTTCAAA----ATA--A-GC-AGATTTTCT--AA--
*
16343741 TTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
304 -TTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * * *
16343806 CAAAACAATTCACCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGTAAAAAGTGTCCCC
368 CAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
*
16343871 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGT
433 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
16343936 ATGAGTTCTCAAGGTTTGATGAGGGATAAGGGGCCAAGATAAGGGCCAAGTACCAGCACCCATCG
498 GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
16344001 CACATCATGTGCGCACACCCCCCGACCCCC-CTGATCATCGGAACCCCAATGCCGCCGGTTAGGT
563 CACATCATGTGCGCACACCCCCCGACCCCCTC-GATCGT--GAAGCCCAATGCCACCGGTCAGGT
16344065 TCTCC-AGTGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAGT
625 TCTCCGA-TGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGC-A--
* * *
16344129 GCTGTCGCAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCATGTGCTTAGAATGGG
686 ----T-G---CCC-T-GT-C-GT--AACCTT--AC--GG--T---CT-GA--T-CTTAGACTGGG
* * * *
16344194 AATGAACTCGGTATGCCTAAGTCAA-CCATGAAACGAGCGTGCGGGCGTTCAGTCGACCAGAGGG
724 AATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGG
* * *
16344258 GCGGGATGCACAAGTTGGGGATCGGCCGGGTCCCCTTCTGCGTGCTGC
789 GCGGGATGCGCAAGTCGAGGATCGGCCGGGTCCCCTTCTGCGTGCTGC
* * * * *
16344306 CGATCCTGCTGCTGTAACCTTCGGTCTGGTTCGATCTTATATTAGAATGAACTCCGTATGCCTAA
1 CGATCCTGCTACCGTAACCCTCGGTC-GGTT-GATCTTAGACT-GAATGAACTCCGTATGCCTAA
* * * * * * * * *
16344371 GCCAACCGATGAAACGAGC-GAGCGGGCCGACACTATGTCGGCCAGAGAGGCGGGATGCCCAAGC
63 GCCAA-CGACGAAACAAGCGGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATACGCAAGC
* * * * *
16344435 CATGGATCAATAAGGTGCTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAATACCAT
127 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAT
* **
16344500 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGAAAAG-CT
192 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC-
* *
16344564 GACTCATTTTTTATTTTTCACGATTTTCAAAACTTTTTAAGGTTCAGGATTTTTTAAAATTTTTT
256 GACTCATTTTCTATTTTTCACGATTTTCAAAA-----TAA-G--CA-GATTTTCT--AA--TTTT
* * * *
16344629 CATAAAGAGTTTTGGCACCAAACCTT-GTAGTCGTGATCCTTGTATTTTTGTTGGCATGCGCAAA
308 CAGAAAGAGTTTTGGCCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
16344693 AAGATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCACTT
372 AAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TT
16344758 T-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
436 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
16344822 AGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCGAGTACTAGCACCCATCGCAC
501 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * *
16344887 ATCATGTGCGCACACCCCCCGA-----TTG-TCG-GAAGCCTATTGCCACCGGTCAGGTTCTCTG
566 ATCATGTGCGCACACCCCCCGACCCCCTCGATCGTGAAGCCCAATGCCACCGGTCAGGTTCTCCG
* * **
16344945 GTGATGGTGTCCCGGTGAAGAAAAATGCAACACCAGCACATGCCCGAGCCCAGCATGTGCTGGCG
631 ATGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA-----T---G
* * *
16345010 TAACCCTCGGTCCGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATCAAC
688 ---CCCT--GT-C-G--TAACCTT--AC--GG--T---CT--G-AT-CTTAGACTGGGAATGAAC
* * * * * *
16345075 TCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGAT
731 TCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGAT
* * * * *
16345140 GCGTAAGTCGAGGATCGACCGAGTCCCCCTCTGCATGCTGC
796 GCGCAAGTCGAGGATCGGCCGGGTCCCCTTCTGCGTGCTGC
* * * * *
16345181 CGATCCTGCTACCAG-AACCCTTGGTCCGGTTTGATCTTTGACTGGGAATTAACTCTGTATGCAT
1 CGATCCTGCTACC-GTAACCCTCGGT-CGG-TTGATCTTAGACT--GAATGAACTCCGTATGCCT
* * *
16345245 AAGCCAACGGACGAAACAAGCTAGCGGGCGTGCGGGCACTACG-CCGTCCAGAGAGACGGGATAC
61 AAGCCAAC-GACGAAACAAGC--G-GGGCGGGCGGGCACTACGTCAG-CCAGAGAGGCGGGATAC
* *
16345309 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTGCCAA
121 GCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAA
16345374 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
186 TGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC
* * *
16345439 AAGACGACTCGTTTTCTATTTTTCACGATTTTC-CAA-AA-C-G-TTTTCT-A-TTTCAGAAATA
251 AAGACGACTCATTTTCTATTTTTCACGATTTTCAAAATAAGCAGATTTTCTAATTTTCAGAAAGA
* * * *
16345497 GTTTTGGCCCCAAACTTGGTTGACGTGATACTTGTATTTTTTTTGGCATCCACAAAAAAATTCAA
316 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAA
*
16345562 CTAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
381 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
16345627 TAATGGCTACTGGCAGCAAACCTGTAACATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
446 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAG
* * * * *
16345692 GATTGATGAGGGATAGGGGGCCAATATACGGGACAAGTACCAGCACCCATTGCACATCATGTCCG
511 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * *
16345757 CACACCCCCCTCGACCCCCTCGATCGCTGCAAGCCCAATGACATCGGTCAGGTTCTCCGACGATG
576 CACA-CCCCC-CGACCCCCTCGATCG-TG-AAGCCCAATGCCACCGGTCAGGTTCTCCGATGATG
* * * *
16345822 GTGTCCCGGTGAAGAAAAATACGGCACCAGCACAGGCCTGAACCCAGCATGCCCTGTCATAACCT
637 GTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGCCCTGTCGTAACCT
16345887 T-CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGC
702 TACGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGC
* * * *
16345951 GGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCAAGGATCGGTCGGGTCCCCTTCTGTGT
767 GGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGTCGAGGATCGGCCGGGTCCCCTTCTGCGT
16346016 GCTGC
832 GCTGC
*
16346021 GGATCCTGCTACCGTAACCCTCGGTACGGTCTGATCTTAGACTGCTAATGAACTCCGTATGCCTA
1 CGATCCTGCTACCGTAACCCTCGGT-CGGT-TGATCTTAGACTG--AATGAACTCCGTATGCCTA
16346086 AGCCAATCGACGAAACAAGCGGGTGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATACGC
62 AGCCAA-CGACGAAACAAGC--G-GGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATACGC
* *
16346151 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTGCCATGCCAATG
123 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATG
* * * *
16346216 CCATTTTTCTAGCTTGTAAATTCATACATTGGTCCCCTAAGTCTTCATGTGAAGTTTCATGGCAA
188 CCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* * *
16346281 GACGACTCATTTTCTATTTGTCACGATTTTTGAAAATTTTTACAGTTCGAGATTTTTTTAAAAGT
253 GACGACTCATTTTCTATTTTTCACGA-TTTTCAAAA----TA-AG--C-AGA-TTTTCT--AA--
* * * *
16346346 TTTTCAG-AAGCAGTTTTGACCCCAAACTTGGTAGACTTGATCCTTGTATTTTTATTGGAATGCA
304 TTTTCAGAAAG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
16346410 CA
368 CA
16346412 TTTCAGACAC
Statistics
Matches: 1811, Mismatches: 217, Indels: 183
0.82 0.10 0.08
Matches are distributed among these distances:
838 1 0.00
839 2 0.00
840 359 0.20
841 9 0.00
842 3 0.00
844 2 0.00
847 2 0.00
848 1 0.00
849 2 0.00
851 2 0.00
853 1 0.00
854 5 0.00
855 5 0.00
857 1 0.00
858 3 0.00
859 6 0.00
860 250 0.14
861 59 0.03
862 3 0.00
863 2 0.00
866 6 0.00
867 3 0.00
868 3 0.00
869 1 0.00
870 1 0.00
871 71 0.04
872 3 0.00
873 4 0.00
874 143 0.08
875 104 0.06
876 39 0.02
877 2 0.00
878 1 0.00
879 4 0.00
880 176 0.10
881 2 0.00
882 10 0.01
883 436 0.24
884 11 0.01
887 37 0.02
888 36 0.02
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.27
Consensus pattern (836 bp):
CGATCCTGCTACCGTAACCCTCGGTCGGTTGATCTTAGACTGAATGAACTCCGTATGCCTAAGCC
AACGACGAAACAAGCGGGGCGGGCGGGCACTACGTCAGCCAGAGAGGCGGGATACGCAAGCCATG
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTT
CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
ATTTTCTATTTTTCACGATTTTCAAAATAAGCAGATTTTCTAATTTTCAGAAAGAGTTTTGGCCC
CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTC
GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
GACCCCCTCGATCGTGAAGCCCAATGCCACCGGTCAGGTTCTCCGATGATGGTGTCCCGGTGAAG
AAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGCCCTGTCGTAACCTTACGGTCTGATCTT
AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCGGGCGCTCAGTCGG
CCAGAGGGGCGGGATGCGCAAGTCGAGGATCGGCCGGGTCCCCTTCTGCGTGCTGC
Found at i:16346739 original size:26 final size:26
Alignment explanation
Indices: 16346699--16346751 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16346689 CCAATCCGAT
* *
16346699 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
16346725 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
16346751 C
1 C
16346752 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:16347618 original size:26 final size:26
Alignment explanation
Indices: 16347582--16347640 Score: 86
Period size: 26 Copynumber: 2.3 Consensus size: 26
16347572 CTCAGTCCGG
*
16347582 TCCG-ATG-TTAGACTGGGAATGAAC
1 TCCGTATGCTTAGACTGAGAATGAAC
*
16347606 TCGGTATGCTTAGACTGAGAATGAAC
1 TCCGTATGCTTAGACTGAGAATGAAC
16347632 TCCGTATGC
1 TCCGTATGC
16347641 CTAAGTCAAC
Statistics
Matches: 30, Mismatches: 3, Indels: 2
0.86 0.09 0.06
Matches are distributed among these distances:
24 3 0.10
25 3 0.10
26 24 0.80
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
TCCGTATGCTTAGACTGAGAATGAAC
Found at i:16349395 original size:26 final size:26
Alignment explanation
Indices: 16349366--16349418 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16349356 CGGATCCGAT
16349366 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16349392 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16349418 C
1 C
16349419 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16351027 original size:890 final size:888
Alignment explanation
Indices: 16346410--16358225 Score: 15353
Period size: 890 Copynumber: 13.4 Consensus size: 888
16346400 TTGGAATGCA
*
16346410 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
16346475 TGTGAGTTCTCGAGGTTTGATGAGGGATAAGAGGCCAATATAAGTGCCAAGTACCAGCACCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * ** * ***
16346540 GCACATCATGTGCGTACACCCCCCCAGCCCCCCCGATCACCGAAAATGCCAATGTCATAGGTCAG
131 GCACATCATGTGCGCACACCCCCCC-GCCCCCCCGATCGCCG-GAACCCCAATGCCGCCGGTCAG
** * *
16346605 GTTCTCCGATGATGGTGTCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCGCAGCATG
194 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * ** * *
16346670 TGCTGCCGCAACTCTTGGTCCAATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGG
259 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
16346735 CAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAAG
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * ** * * *
16346800 GGCGAGATGCACAAGCCAGGGATCGACCGGG-CCCCCTTCTATGTGCTGTCGATACTGCTACAGC
389 GGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCC-TCTGCGTGCTGTCGATCCTGCTGCCGC
* * *
16346864 AACCCTCGGTCCGAT-TCGATCTTAGACTGGGGATGAACTCCGTATGCCTAAGCCAACTGACGAA
453 AACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * *
16346928 AGGAGCTGG-CGGGTGGGCGGGCACTACGCCGGCCAAAGAGGCGAGATCCGCAAGCCGTGAATCG
517 ACGAGC-GGAC-GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* * * ** *
16346992 ATAGGGTGGTAGCTGGGTTTAGGAAAATCTTCATATTTCTGCCATGCCAACACCAGTTTTCTGGC
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* *
16347057 TTGTAAATTCATACAATGATCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTT
645 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * *
16347122 CTATTTTTCACGATTTTTGAAACTTTTTACGATTCGAGATTTTTTAAATTTTTTTCAGAAGGAGT
710 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGT
* *
16347187 TTCGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCT
775 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* *
16347252 AAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCC
840 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
16347301 TATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
*
16347366 TGTGACTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * * * * *
16347431 GCACATCATGTGTGCACACCCCTCGGTCCCCCTGATTGTCGGAACCCCAATGCCGTCGGTCAGGT
131 GCACATCATGTGCGCACACCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGT
* * * * *
16347496 TCTCCAGTGATGGTGTCTCGACGAAGAAAAATACGGCACCAGCACATGCTCAAGCCCAGCATGTG
196 TCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * * *
16347561 CTGTCGCAACCCTCAGTCCGGTCCGATGTTAGACTGGGAATGAACTCGGTATGCTTAGACTGAGA
261 CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* *
16347626 ATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAAGGG
326 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* ** * ** *
16347691 CGAGATGCGCAAGCCGGGGATCGGCCGGGCCCCCCTCTATGTGCTGTCGATCCTGCTACCGCAAC
391 CGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* *
16347756 CCTCGGTCCGGTCCGATCTTAGACTAGGG-ATGAACTCCGTATGCCTAAGCCAACCGACAAAACG
456 CCTCGGTCCGGTCTGATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * * * * *
16347820 AGCGGGCAGACGGGCCGACACTATGTCGGCTAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
520 AGCGGAC-GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* * *
16347885 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCACGCCAATACCATTTTTTTGGCTTGT
584 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
*
16347950 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTAT
649 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
** * *
16348015 TTTTCACGATTTTCAAAACTTTTTACGGTTCGGAATTTTTTAAAATTTTTTCAGTAGGAGTTTTG
714 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
** * * * *
16348080 GTGCCAAACCAT-GTAGACGTGATCCTTGTATTTTTTTTGTCATGCACAAAAAGATTCAGCTAAA
779 GCCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
16348144 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
843 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
16348190 CACTTT-AGACACTTTAATGCCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTATTTAAGGGG
1 CA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
16348254 GTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
65 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * * * *
16348319 CGTACATCATGTGCGCAGACTCCCCCGGCCCCACCGATCGCCGGAACCCCTATGCTGTCGGTCAG
130 CGCACATCATGTGCGCACAC-CCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* * ** * *
16348384 ATTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCTAGCATG
194 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * ** * *
16348449 TGCTGCCGCCACCCTCGGTCCAGTCCAATCTTAGACTGGGAATCAACTCCATATGCTTAGACTGG
259 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
16348514 GAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGG
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * ** *
16348579 GGCGGGATGCGTAAGCCGAGGATCGATCGGGTCACCCT-TAGCATGCTGCCGATCCTGCTATCGT
389 GGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCT-GCGTGCTGTCGATCCTGCTGCCGC
* * *
16348643 AACCCTTGGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
453 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
** * * * * *
16348708 CGAAAGG-CGGGCGGGCGGGCACTACGTCGG-TAAAGAGACGGGATGCACAAGCCGTGGATCGAT
518 CGAGCGGAC-GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* *
16348771 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAATGCCATTTTTTTGGCTT
582 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* *
16348836 GTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCT
647 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * ***
16348901 ATTTTTCATGATTTTCT-AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAGTTTTT
712 ATTTTTCACGATTTT-TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * *
16348965 TTGGCCGCAAACTTGGTAGACGTGATCCCTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
776 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
16349030 AAAACTCGAAGTGTACAAGATTTT-T-ACCCTTTGAAAAAAGTGTCCC
841 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
16349076 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
16349141 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCGCCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* ** * * * *
16349206 ACACATGTTGTGTGGACACCCCCACCCGACCCCCCCGATCACTGGAACCCCAATGCCGCCGGTCA
131 GCACATCATGTGCGCACA-CCCC-CCCG-CCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCA
* * * * * *
16349271 GGTTCTCCGACGGTGGTGTCTC-AGCGAAGAAAATTACGGCACCAGCACAAGCCTGAGCCCAGCA
193 GGTTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* *
16349335 TGTGCTGCTGCAACCCTCGGT-CGGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
257 TGTGCTGCCGCAACCCTCGGTCCGG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * * *
16349399 TGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAACGAGCATGCGAGCGCACAGCCGGGCAG
321 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * * * *
16349464 ATGGGCGGGATGCGTAAGCCGGGGATCGA-CTGGGTCCCACTCTACGTGCTGTCGATCTTGTTGT
386 AGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGC
* * * ** *
16349528 CGTAACCATTGGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAGGCCAACCGACG
450 CGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* ** *
16349593 AAACGAGC-G--GGCGGGTGGGCACTACATCGGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCG
515 AAACGAGCGGACGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
16349655 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTGCCAATGCCATTTTTCTGGC
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* * * **
16349720 TTGTAAATTCATACAATGGTCACTTAAGCCTTCGTGTGAAGTTTCATGGCAAGAGGACTTATTTT
645 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* ** * * *
16349785 CTACTTTTCACGATTTTTGAAACTTTTTACGGTTCCAGATTTTTTGAAATTTTTTGAGTAGGAGT
710 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGT
* *
16349850 TTTGG-------C-T-GTAGATGTGATCCTTGTATTTTTGTTGTCATGCACAAAAAAATTCAGCT
775 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
16349906 AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
840 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
16349955 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * * *
16350020 TGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATACAAGGGCCAAGTACCTGCACCCATT
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * **
16350085 GTACATCATGTGCGCACACCCCCCCCGACCCCCTCGATCGACGGATCCCCAATGCCTTCGGTCAG
131 GCACATCATGTGCGCACA-CCCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* * * *
16350150 AG-TCTCCGGCGATGGTGTCCCGGA-GAAGTAAAATACAGCAACAGCACATGCCCGAGCCCAGTA
194 -GTTCTCCGGCGATGGTGTCCC-GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * * *
16350213 TGTGCTGCCGCAACCCTCAGTCTGGTCTGATTTTAGACTGGGAATGAACTCCGTATGCTTACACT
257 TGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * *
16350278 GGGAATGAACTCCGTATGCCCAAGTCAACCCACGAAACGAGCATGCGGGCACTCAGCCGGCTAAA
322 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * ** *
16350343 GGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCTTTCTGCGTGCTGTCGATCCTGCTGCCA
387 GGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCG
* *
16350408 CAACCCTTGGTCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
452 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
16350473 ACGAGCGGACGGTCAGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGCGTAAGCCGTGGATCGA
517 ACGAGCGGACGG-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* * * * *
16350538 TAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGAAGCCAATGCCGTTTTTCTGGCT
581 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
16350603 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
646 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* ** * *
16350668 TATTTTTCACGATTTTTGAAA-TTTTTACTGTTCAAGATTTTTTTAACTTTTTTCAGAAGGAGTT
711 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* *
16350732 TTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTT-TTCGGCATGCACAAAACAATTCAGCT
776 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCT
* *
16350796 AAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCC
840 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
16350845 CATTTCAGACACTTTAATGCCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
16350910 TATGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAAGTACCAGCACCCATT
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
16350975 GCACATCATGTGCGCACACCCCCCCGCCCTCCCCAGATCGCCGGAACCCCAATGTCGTCGGTCAG
131 GCACATCATGTGCGCACACCCCCCCGCCC-CCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAG
** *
16351040 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATG
194 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* *
16351105 TGCTACCAG-AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTG
259 TGCTGCC-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* ** * * * * *
16351169 GGAATGAACTCTGTACACCTAAGTCAACCCACAAAAGGAGCATGCGGGCGCTCAACCGACCAGAG
323 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
*** * * * * * **
16351234 GGGCAAAATACGCAAGCTGTGGATCG-GCTGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGTTG
388 GGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCG
* * ** ** *
16351298 CAACCCTCAGTCCGATCCAATCTTAGACTGGGAATGATTTCGGTATGCCTAAGCCAACCGACGAA
452 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * * *
16351363 ATGA-AGGAGCAAGCGGGCGGGCACTATGCCAGCGAGAGAGGCGGGATACGCAAGCCGTGGATCG
517 ACGAGCGGA-C-GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* ** * *
16351427 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTATGGTAATACCATTTTTTTGGC
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* * * *
16351492 TTGTAAATTCATACAGTGGTACCTTAAGCCTTCATGTGAAGTTTCATGGAAAGACGACTCATTTT
645 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * **
16351557 CTATTTTTCATGATTTTTGAAACGTTTTACGGTTCGGGATTTTTTAAAATTCTTTCAGAATTAGT
710 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGT
* * *
16351622 TTTGGCCCCAAACTTTGTAGACGTGATCCTTGCATTTTTTTTGGCATGCACAAAAAAATTCAGCT
775 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
16351687 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCC
840 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
16351736 CATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTCTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
16351801 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGTGCTAATATAAGGGCCAAGTACCAGCACCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
16351866 GTACATCATGTGTGCACA-CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCTGGCGGTCAGGT
131 GCACATCATGTGCGCACACCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGT
* * * *
16351930 TCTCCGGTGATGGTGTCCCGACGAAGCAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTG
196 TCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * *
16351995 CTGCCGTAACCCTCGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGAGA
261 CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* ** * * *
16352060 ATGAACTCTGTACACCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAACCGGCTAGAGGGG
326 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * ** * **
16352125 CAGGATGCGCAAGTCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTTGCAAC
391 CGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* ** * * ** * * *
16352190 CCTCAGTCCGGTCCAATGTGAGACT-GGAATGATTTTCGTATGCCTAAGCCAACCAACGAAATGA
456 CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
16352254 AC-GAGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCACAAGCCGTGGATCGATAG
521 GCGGA-CG-GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* * *
16352318 GGTGGTAGGTGGGTTTAGGCAGATCTTCATATTTATGCCATGCCAATGCCATTTTTATGGCTTGT
584 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
* * *
16352383 AAATTCATAGAATGGTCCCTTCAGCATTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
649 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* *
16352448 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGATTTTTG
714 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* * * * * *
16352513 GCCCCAAACTTCGTAGATGTGATCCTTGTATTTTTGTTGGCATGTACACAAAACTTCAGCAAAAA
779 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * *
16352578 AATCGAAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGTCCT
844 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
16352623 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
16352688 TGTGAGTTCTCGAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCTATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* ** * ** *
16352753 GTACATCATGTGCGCACACCCCCTGGCCCCCTCGATCATCGGAACCCCAAAGCCGCCGGTCAGGT
131 GCACATCATGTGCGCACACCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGT
* *
16352818 TCTCCGGCGATGGCGTCCCGACGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
196 TCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * **
16352883 CTGTCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACAAGGA
261 CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * * ** * *
16352948 ATGAACTCTGTATCCCTACGTAAACCCATAAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGG
326 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* *
16353013 CAGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTG-CTGATCCTGCTGCC-TAA
391 CGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCAA
* ** * *
16353076 CCCTCAGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCAACCGATGAAACG
455 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* ** * * * *
16353141 AGTGGGTGGACGGGCGGGCACTACACCGGCCAGAGAGGTGGGATGCGCAAGCCTTAGATCGATAG
520 AGCGGACGG-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* ** * *
16353206 GGTGGTAGGTGGATTTAGTTACATCTTCATATTTATGCCATACCAATGCCATTTTTCTGGCTTGT
584 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
* * *
16353271 AAATTCATAGAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTTGTTTTCTAT
649 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * **
16353336 TTCTCATGATTTTTGAAACTTTTTACGGTTCCAGATTTTTTAAAATTTTTTCAGAAGGAGTTTT-
714 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
*
16353400 GCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
779 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
*
16353465 ACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
844 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * *
16353510 CATTTTAAACACTTTAGTGGCTACTGGAAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
16353575 AGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAACAGCACCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * ** **
16353640 GCACATCATGTACGCACACCCCCCGGCCCCCCTCGCTCATCGGAACCCCAATGCCGTTGGTCAGG
131 GCACATCATGTGCGCACACCCCCCCGCCCCCC-CGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* ** * *
16353705 TTCTCCGACGATGGTGTCCCGGTGAAGAAAAACACGGCACCAGCACTTGCCCGAGCCCAGCATGT
195 TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * * **
16353770 GCTACCGCAACCCTCGATCTGGTCTGATCTTGGACTGGGAATGAACTCCGTATGCCTAGACAAGG
260 GCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * * **
16353835 AATGAACTCCGTATCCCTAAGTAAACCCACAAAACGAGCGTACGGGTGCTCAATCGGCCAGAGGG
325 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
** * *
16353900 GCAAGATGCGCAAGTCGGGAATC-AGTCGGGTCCCCCTCTGCGTGC--T-G--CC-G-T-----A
390 GCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCA
* ** *
16353952 ACCCTCGGTCCGGTCTAATCTTAGACTGCTAATGAACTCCGTATGCCTAAGCCAACCAAC-AAA-
454 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * ** * *
16354015 -A--TGA----------G---T--G--GG-C----AGGCGTGATGCATAAGTCGTGGATTGATAG
519 GAGCGGACGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* *
16354055 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCGTGCCAATGCCATTTTTCTGGCTTGT
584 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
* *
16354120 AAATTCATACAATGGTCCCTTAGGCCTTCATGTGAAGTTTCATGGCAAAACGACTCGTTTTCTAT
649 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* *
16354185 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGATTTTTG
714 TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTG
* ** * * * *
16354250 GCCCCAAACTTCGTAGATATGATCCTTGTATTTTTGTTGGCATGTACACAAAACTTCAGCAAAAA
779 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
16354315 AATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCT
844 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
16354360 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTTTTTAA-GGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
*
16354424 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * * *
16354489 ACACATCATGTGTGCACACCCCCCCCCGCCCCCGCGATCACCAGAACCCCAATGCCGCCAGTCAG
131 GCACATCATGTGCGCACA--CCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* * * *
16354554 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGGCCAGCATG
194 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* ** * *
16354619 TGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGTAAATGAACTCCATATGCTTGGACTGG
259 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
16354684 GAATGAACTCCGTATGCCTATGTCAACCCATGAAACGAGCTTACGGGCGCTCAGTCGGCCAGAGG
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * *
16354749 GGCGGGATGCAG-AAGCTGGAGATCGGTCGGGTCCCCCTCTGCGTGCTGTCAATCCTGCTGCTGC
389 GGCGGGATGC-GCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGC
*
16354813 AACCCTCGGTCCGGT-TCGATCTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCAACCGACGAA
453 AACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
** * * * * *
16354877 ACGAGCGGGTGGACGGGCCGACACTACACCGGCCAGAGAGGTGGGATGCGCAAGCCTTGGATCGA
517 ACGAGCGGACGG-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
* ** *
16354942 TAGGGTGGTAGGTGGATTTAGTTACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCT
581 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
16355007 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
646 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
** *
16355072 TATTTTTCACGATTTTCAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTT
711 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * * *
16355137 TTGGCCCCAAAATTCGTAGACGTCATCCTTGTATTTTTGTTGGCATGCA-TAAAAAATTCAGCTA
776 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
16355201 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
841 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
16355249 CATTTCAGACACTTTAATGGATACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
16355314 TTTGACTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * ** *
16355379 GCACATCATGTGCGCACACCCCCCACGGTCCCCCCGATCGTCGGAACCCTAATGCCGCCTATCAA
131 GCACATCATGTGCGCACACCCCCC-C-GCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
* * ** * *
16355444 GTTCTCTGGCGATGATGTCCCGGTGAAAAAAAATACGGCACCAACACATGCCCGAGCCCAGCATG
194 GTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
16355509 TGCTGTCGCAACCCTCGATCCGGT-TCGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTG
259 TGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * **
16355573 GGAGTGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCTAGCCAGAG
323 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * * * ** *
16355638 GGGCAGGATGCGCAAGACAGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGT
388 GGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGC
* ** * * *
16355703 AACCCTCGATTTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAA
453 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
** * * * * *
16355768 CGAATGGGCGGGCGGGCGGGCACTACGCCGGCTAGACAGGCGGGATGCGCATGCCATGGATCGAT
518 CGAGCGGAC-GGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* *
16355833 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACCGA-GCCAATGCCATTTTTCTGGCT
582 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC-ATGCCAATGCCATTTTTCTGGCT
* *
16355897 TGTAAATTCATACAATGGTCCGTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTC
646 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
16355962 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAATTTTTTCAGAAGGAGTT
711 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTT
* * * *
16356027 TTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCCA
776 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
16356092 AAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
841 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * * * *
16356140 CATTTAATACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTGAAATGCTTTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* ** *
16356205 TGTGAGTTCTTGAGGTTTGATGAGGTTTGGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * *
16356270 GCACATCATGTGCGCACACCCCCCCACCCCTCCCGATCACCAGAACCCCAATACCGCCTGTCAGG
131 GCACATCATGTGCGCACACCCCCCCGCCCC-CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* * *
16356335 TTCTTCGACGATGGTGTCCC-AGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
195 TTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * *
16356399 TGCTGTCGCAACCTTCGGACCAGTCTGATCTTAGACTGTGAATGAACTCCGTATGCTTAGACTGT
259 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
** * * * * **
16356464 GAATGAACTCTATATGCTTATGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCAGATAGAGG
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
16356529 GGCGGGATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCT-ACTGATCCTACTACTGC
389 GGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGC
** * * *
16356593 AACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCCAAGGCAACCGATGAAA
453 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * ** * **
16356658 CGA---AAGGGCGAACGGGCACTACACCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATA
518 CGAGCGGACGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* * ** * *
16356720 GGGTGGTAGCTGGATTTAGTTACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTCGCTTG
583 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
* *
16356785 TAAATTTATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
648 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
** * *
16356850 TTTTTCACGATTTTCAAAACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTCAGAA-GACGTTT
713 TTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGA-GTTT
* * * *
16356914 TGACCCCAAATTTGGCAGAAGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
777 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
*
16356979 AAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
842 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
16357026 CATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTTAAACGCTCTTTAAGGGGG
1 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
16357091 TTTGAGTTCTCGAGGTTTGATGAGGGATAAGGAGCCAATATAAGGGCCAAGTACCAGCACCCA-C
66 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
** * * * *
16357155 TGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCGCTGGAACCCCAATGTCGCCAGTTAGG
131 -GCACATCATGTGCGCACACCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
*** *
16357220 TTCTCCGGC-ATGGTGTCCCGGTAAAGAAAAATACGGCACCAGCACATGCCCGACCCCAGCATGT
195 TTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * * *
16357284 GCTGCCACAACCCTCTGTCCGGT-TCGATCTTAGTCTGTGAATGAATTCCGTATGCTTAGATTGG
260 GCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
16357348 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCTAGAGA
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
** * * * * * * **
16357413 GGTAGGATGCGTAAGACGAGGATCGATCGGGTCCCCTTCTGTGTGCTGTCGATCCTACTGCCGTG
389 GGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCA
* * * *
16357478 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAGGGCAACCGACGAAAC
454 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * *
16357543 GA---AAGGGCGGGCGGGCACTACACCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
519 GAGCGGACGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
* * ** * *
16357605 GGTGGTAGCTGGATTTAGTTACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTCTCGCTTGT
584 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
* * *
16357670 AAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGTAGGACGACTCGTTTTCTAT
649 AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * **
16357735 TTTTCACGA-TTTTCACAACTTTTTATGGTTCGAGACTTTTTTTTAATTTTTT-AG-A-GAG-TT
714 TTTTCACGATTTTTGA-AACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTCAGAAGGAGTTT
* * *** * *
16357795 TGG-CCCAAATTTTGGTAGAAGTGATTCC-TCCCTTTTTGTTGGCATGCCGCCAAAAAATTCAGC
777 TGGCCCCAAA-CTTGGTAGACGTGA-TCCTTGTATTTTTGTTGGCATG-CACAAAAAAATTCAGC
*
16357858 T-AAAACTTTGAAGTGTACAAGATTTTTGTCGACCATTCTGAAAAAAGTG-CCC
839 TAAAAAC-TCGAAGTGTACAAGA-TTTTGT-GACCATT-TGAAAAAAGTGTCCC
16357910 TCATTTCAGACACTTTAATGG-TACTGG-AGCAAACCATGTAAAATTCTCAAATGCTCTTTAAAG
1 -CATTTCAGACACTTTAATGGCTACTGGCAGCAAACC-TGTAAAA-TCTCAAATGCTCTTT-AAG
* *
16357973 GGGGTGTGAGTATTCTCGAGGTTTG-TGAGGGATAGAGGTGCCAATATAATGGCCAAGTA-CAGC
62 GGGGTGTGAG--TTCTCGAGGTTTGATGAGGGATAG-GGGGCCAATATAAGGGCCAAGTACCAGC
* ** ** * *
16358036 A-CCATTCGGAC-TCATGTTAGCACACCCCCTGGCCCCCCGGATCGTCGGAACCCCAATGCCGCC
124 ACCCA-TCGCACATCATGTGCGCACACCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCC
* * * * * *
16358099 GGTCAAGTTCTCCGGCGATGGCGTCCCGATGAAAAAAAATGCGGCACCAGTACATGCCCGAGCCC
188 GGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
*** *
16358164 AGCATGTGCTATTGCAACCTTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
253 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
16358226 CTAAGCCAAC
Statistics
Matches: 9645, Mismatches: 1131, Indels: 302
0.87 0.10 0.03
Matches are distributed among these distances:
849 280 0.03
850 384 0.04
851 13 0.00
852 1 0.00
853 1 0.00
854 2 0.00
855 2 0.00
856 1 0.00
857 1 0.00
858 1 0.00
861 2 0.00
862 54 0.01
863 3 0.00
865 1 0.00
867 1 0.00
872 1 0.00
874 1 0.00
876 3 0.00
877 123 0.01
878 316 0.03
879 166 0.02
880 7 0.00
881 82 0.01
882 219 0.02
883 24 0.00
884 506 0.05
885 122 0.01
886 896 0.09
887 902 0.09
888 1698 0.18
889 935 0.10
890 2270 0.24
891 625 0.06
892 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
GCACATCATGTGCGCACACCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGT
TCTCCGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
CGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
CCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
GCGGACGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAA
ATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
Found at i:16352939 original size:26 final size:26
Alignment explanation
Indices: 16352910--16352960 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16352900 CCGATCCGAT
**
16352910 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACAAGGAATGAACTCCGTATG
*
16352936 CTTAGACAAGGAATGAACTCTGTAT
1 CTTAGACAAGGAATGAACTCCGTAT
16352961 CCCTACGTAA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.18, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACAAGGAATGAACTCCGTATG
Found at i:16356464 original size:26 final size:26
Alignment explanation
Indices: 16356428--16356483 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
16356418 CCAGTCTGAT
*
16356428 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGTGAATGAACTCCATATG
*
16356454 CTTAGACTGTGAATGAACTCTATATG
1 CTTAGACTGTGAATGAACTCCATATG
16356480 CTTA
1 CTTA
16356484 TGTCAACCCA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.29, C:0.18, G:0.20, T:0.34
Consensus pattern (26 bp):
CTTAGACTGTGAATGAACTCCATATG
Found at i:16360684 original size:26 final size:26
Alignment explanation
Indices: 16360648--16360700 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16360638 CCAGTCTGAT
16360648 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16360674 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16360700 C
1 C
16360701 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16360770 original size:890 final size:885
Alignment explanation
Indices: 16358902--16378921 Score: 13899
Period size: 890 Copynumber: 22.4 Consensus size: 885
16358892 CCGGTCCTAT
* * * * *
16358902 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * * ** * * * * *
16358967 CGGCCAGAGGTGCGAGTTACGCAAGCCAGGGATCGGCCGGGTACTCCTCTACGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * * * *
16359032 TACTGCCGCAA-CCTCTA-TCCGGTCTGATCTTAGATTAGGAATGAACTCCGTGTGTCTAAGCCA
131 TGCTGCCGCAACCCTC-AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * **
16359095 ATCGACGAAACGAGCGGGCGGACGGGCGGGCACTACGTCAACCAGAGAGGCGGGATGCGCAAGCT
195 ACCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* * *
16359160 GTGGATGGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGACAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATT
* * * * *
16359225 TTTTTGGCTTGTATATTAATACAATGGTCCCTTATGCCTTCATTTGAAGTTTCATGGCAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
16359290 CTCGTTTTCTATTTTTCACGATTTTGGAAAATTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * *
16359355 CAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--TTTTT-G--T-CCCAAAAAAA
453 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTGGCATGCACAAAAAAA
* * * *
16359414 TTCTA-CCAATAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAG
518 TTC-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
16359478 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTT
* * * * *
16359543 CTCAAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTACTAGGACCCATTGCACATCA
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
16359608 TGTGCTCACACCACCCCCGCCCCCCCGTTCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGG
711 TGTGCGCACACC-CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCTCCGA
16359673 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
775 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* *
16359738 AACCCTCGGTCCAGT-TCGATCTTAAACTGGGAATGAACTCCATATG
840 AACCCTCGGTCCAGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
** *
16359784 CTTAGACTGGGAATGAACTCCGTATTTCTAAGTCAACCCACGAAACGAGCGTATGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* *
16359849 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCATGCTGCCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* ** * * *
16359914 TGATGCCGCAACCCTTGGTCTGGT-TCAATCTTAGACTGGGAATGATCTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCAGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
16359978 ACTGACGAAACAAACGGGCGGGCGGGCGGACGCTATGCCGGCCAGAGTGGCGGGACGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGA-ACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* * *
16360043 GTGGATCGATAGTGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCGATCATGACAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCG-CCATGCCAATGCCATT
* * * *
16360108 TTTCTGGCTTGTATATTAATACAATGGTCCCTTATGCCTTCATGTGAAGTTT-ATTGGCTAGACG
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA-TGGCAAGACG
16360172 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
387 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * *
16360237 ACAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTAGTTTTTTTGGCATGCCCAAAAA
452 AGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAA
* * *
16360302 AATTGAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCA
516 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16360367 GATACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGCGGGTGTGAGT
581 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGT
* * *
16360432 TCTCGAGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTACCAGCACCTATTGCACATC
645 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
** * * * *
16360497 ATGTGCGCACACCCTCCCATCCCGCCCGTTCGTCGGAACCCCAATGCCTCTGGTCAAGTTCTCCG
710 ATGTGCGCACACCC-CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCTCCG
* * * * *
16360562 GCGACGGTGTCCCAACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCG
774 ACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
16360627 CAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
839 CAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
16360674 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAGACGAGCGTACGGGCGCTC-GA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG-
* * ** * * ** *
16360738 CCGACTAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTACCCCTCTATGTGCTGTCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATC
* * * * * *
16360803 TTGCTCCCACAACCCTCTA-TCCGGTTTGATCTTAGACTGGGAAGGAACTCCATATGCCTAAGCC
130 CTGCTGCCGCAACCCTC-AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
16360867 AACCAACAAAACGAGCGGGTGGGCAGGCAGGCACTACGTCGGCCAGAGAGGCAGGATGCGCAAGC
194 AACCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
16360932 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGACAATGCCAT
258 TGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCAT
* * * *
16360997 TTTTCTGGCATGTATATTAATACAATGGTCCCTTATGCCTTCATGTGAAGTTTCATGGCAAGACG
322 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* *
16361062 ACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTC
387 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* *
16361127 AGAATA-AGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCACAAAA
452 AGAA-AGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAA
* * *
16361191 ACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTT
515 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
16361256 AGACACTTTAATGGCTACTGGTAAG-AAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGA
580 AGACACTTTAATGGCTACTGG-CAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGTGTGA
* * * * **
16361320 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAATGGACAAGTACCAGCTCCTATCATACA
643 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
16361385 TCATGTGCGCACA-CCCCCGGCCCCCCCGATCGCCGTAACCCCAATGCCACCGGTCAGGTTCTCC
708 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCTCC
* * * * *
16361449 GACAATGGTATCCC-AGCGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTAC
773 GACGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
*
16361513 CGTAACCCT---T---G---G-TC-----C--GG--T---CT--G-AT-
837 CGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
16361536 CTTAGACTGGGAATGAACTCAGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * * *
16361601 CGGCCAGAAGGGCGGGATGCGCAAGTCGGGGATCGGTCGTGTCCACCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * *
16361666 TGCTGCCGCAACCCTCAATCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** * *
16361731 CCGACGAAACGAGCGGGCGGGCGAGCGGGTATTACATCGGCCAGATAGGTGGGATGCGCAAGCTG
196 CCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTG
*
16361796 TGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATTT
* **
16361861 TTTTTTCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
324 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
16361926 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTCTT-A
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT-TTCA
* * *
16361990 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAC
453 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAA
*
16362055 ATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
517 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16362120 ACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGCGTGTGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG-GTGTGAGTT
* * **
16362185 CTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCACACATGT
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
16362250 TGTGTGGACACCCCCACCCGACCCCCCCGATC-ACTGGAACCCCAATGCCGCCGGTCAGGTTCTC
711 TGTG-CG-CACACCC-CCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCTCCGGTCAGGTTCTC
* * * * * * *
16362314 TGACGGTGGTGTCTC-AGCGAAGAAAATTACGGCTCCAGCACATGCCCGAGCCGAGAATGTGCTG
772 CGACGATGGTGTCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * *
16362378 CCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATT
836 CCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
*
16362428 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * *
16362493 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGTGTCCCCCTTTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * *
16362558 TGCTGCCACAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCGAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16362623 CCGACGAAACGAGCGGGCGGGCGAGTG-GGTACTACGTCGGCCAGAGAGGCGGAATGCGCAAGCT
196 CCGACGAAACGAGCGGGCGGGCG-G-GCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
16362687 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATT
* *
16362752 TTTCTGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTAATGTGAAGTTTCATGGCAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
16362817 CTCGTTTTTTATTTTTCATGATTTTTGAAAATTTTTACGGTTCGGGATTTTTTAAAATTGTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* *
16362882 -AAAGGAGTTTTGGCCCCAAACTTAGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAA
453 GAAA-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAA
**
16362946 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGG
516 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
** *
16363011 GACACTTTTTTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACT
581 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
* * * ** *
16363076 TCTTGAGGTTTAATGAGGGATAGGGGGCCAACATAAGGGTGAAGTACCAGCACCCATCACACATC
645 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *
16363141 ATGTGCGGACATCCCCACTCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTC
710 ATGTGCGCACA-CCCC-C-CGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCTC
* * ** * ** *
16363206 TGACGATGGTGTCTCGTGGAATAAAAATGTGGCACCAGCACATGCCCGAGCCCAAG-ATGTGCTA
772 CGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC-AGCATGTGCTG
* ** * *
16363270 CTGCAACCCTCGGTCTGGT-TCGATCTTACACTGGGAATGAACTCTGTATG
836 CCGCAACCCTCGGTCCAGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16363320 CTTAGACTAAGG-ATGAACTCTGTATGCCTAAGTCAACCCACTAAACGAGCGTGCGGGCGCTCAG
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
* * * * * * * ** *
16363384 CCAGCCAAAGGGACGGAATGGGCAAGCCGAGGATCTG-TCGGGTCCCCCTCTATGTGCTACCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GATCGGGTCCCCCTTTGCGTGCTGCCGAT
* * * * *
16363448 CCTACTGCCGCAACTCGCAGTCCGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCC
129 CCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
16363513 AACCGATGAAACGAGCGGGCGGGTGGGC---ACTACGCCGGCCAGAGAGGCTGGATGCGCAAGCT
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
16363575 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATT
*
16363640 TTTCTGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* ** * * * *
16363705 CTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTACGGTTCTGGATTTTTCAAAACTCTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * * *
16363770 GAATGAGTTTTGGCCCTAAATTTGCTAGACGTGATCCTTGTATTTTTTTTGGCATTCACAAAAAA
453 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAAA
* *
16363835 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTTAG
517 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16363900 ACACTTTAATGGCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG-TGTGAGTT
* *
16363965 CTCGAGGTTCGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * *
16364030 TGTGTGCACACCCCCACCGGCCCCCCCGATCG-CTGGAACCGCAATG-CTGCCGGTTAGGTTCTC
711 TGTGCGCACA-CCCC-CCGGCCCCCCCGATCGTC-GGAACCCCAATGCCT-CCGGTCAGGTTCTC
* ** * *
16364093 CGATGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCAAATGCCCGA-CCACAACATGTGCTG
772 CGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCC-CAGCATGTGCTG
*
16364157 CCACAACCCTC-G---A-TC----C---GA-T-----T----T--G-AT-
836 CCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* ** * *
16364181 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGTGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * *
16364246 CGGCCAGAGGGGCGGGATGCACAAGCCGGGCATCGACCGGGTCCCCCTTTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * *
16364311 TGCTGCCGCAACCCTC-GATGCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
16364375 ACCGATGAAACGAGCGGGCGGGCGGGC---ACTACGCTGGCCAGAGAGGTGGGATGCGCATGCCG
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTG
* *
16364437 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTGCCATGCCCATGCCATTTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCGCCATGCCAATGCCATTTT
* *
16364502 TCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACCACT
325 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * * * *
16364567 CATTTTTTATTTTTCACAATTTTTGAAACATTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGA
390 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGA
* * *
16364632 AGGAGTTTTGGCCCCAAACTTGGTAGACGGGATCCTTGTATTTTTGTTGGCACGCACAAAAAAAT
455 AAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAAAT
* * *
16364697 TCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTAACCTATTTGAAAAAAGTGTCCCCATTTTAGA
519 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC-ATTTGAAAAAAGTGTCCCCATTTCAGA
*
16364762 CACTTTAATCGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
583 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTC
* * * * *
16364827 TCAAGGTTTGATGAGGGATAAGAGACCAATATGAGGGCCAAGTACCAGCACCCATCGCACATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * ** *
16364892 GTGCGCAAAACCCCCCGGCTCCGCCCGATATTCGGAACCCCAATGCCGT-CGGTTAGGTTCTCCG
712 GTGCGC-ACACCCCCCGGC-CCCCCCGATCGTCGGAACCCCAATGCC-TCCGGTCAGGTTCTCCG
* * * * *
16364956 ACGATGGGGTCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCTGTATGTGTTGCCG
774 ACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * *
16365021 CAACCCTCGGGCC-GATCCGATCTTAGACTGGGAATGAACTCTGTATG
839 CAACCCTCGGTCCAG-TCTGATCTTAGACTGGGAATGAACTCCGTATG
* ** * *
16365068 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGCGCGGGTGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * ** * * *
16365133 CGGCCAGAGGGGCAGGATGCACAAGCTAGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * ** * * *
16365198 TG-T-CATCGCAACCCTCGGTCCAGTCCAATCTTAGATTGGGAATGAACTTCGTATGCCTAAGTC
131 TGCTGC--CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
16365261 AACCCACGAAACGAGCGTGCGGGC--GC---TC-A-GTCGGCCAGAGGGGCGGGATGCGTAAGGC
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAA-GC
* * ****** * ** ** ** * **
16365319 AG-GGATCGATCGGGTCCCCCTCTGCGTGTT--GCTGATC--CAGCTGCCGCAACCCTCAACTTG
258 TGTGGATCGATAGGGT-GGTAGGTGGGT-TTAGGCACATCTTCATATTTCGCCATGC-CAA--TG
* ** * * ** ** * * ** *
16365379 --GTTCAATCTTAGATTGGGAATGAACTCCGTAT-G--CC-TAAGCCAACCGACGAAATG-AGTG
318 CCATT-TTTC-TGGCTTGTAAATTCA-TAC-AATGGTCCCTTAAGCC-TTC-ATG---TGAAGT-
** * * * * **** *** * * * * *** **
16365437 GGC-GGGCACTACGCCGGC-CAGAGATGGGGA-TGCGCAAGCCTTGGATCGATAGGGTGGTACGT
373 TTCATGGCA--A-GACGACTC---GTTTTCTATTTTTCACG-ATT--TTTGA-AACTTTTTAC--
* * ** * * * * * * * *** **
16365499 GGGTTTAGGCACATCTTCATATTTCTGCCTTGC-CAATGCCATTTTTCTAGCTTGTAAA-TTAAT
426 -GG-TTCGGGATTTTTTAAAATTT-T---TT-CAGAAAG--A-GTTT-TGGC-CCCAAACTTGGT
* * * * * *** ***
16365562 ACA-ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCAT
479 AGACGTGAT-CCTT--G---T-AT-T----TTT-TTGGCATG-C-A--C----AAAAAAATTCA-
* * ** ** * ** **
16365626 GATTTTAAAACTTTTTACAGT-T-CGGGATTTT-TTAAAATTTTTTCAAAAAGTGTTTTGGCCCC
522 G--CTAAAAAC--TCGA-AGTGTACAAGATTTTGTGACCA--TTTGAAAAAAGTG---T--CCCC
*** ** ** * *
16365688 AAACTTGGT-AGACGTGATCCTTGT-ATTTTTGTTGGCATGCAAA---AAAAAATTCAGCTAAAA
575 --A-TT--TCAGAC---A--CTT-TAATGGCTACTGGCA-GCAAACCTGTAAAA-TC-TC-AAAT
* * ** * ** ** * * *
16365748 ACTC--GAA---GTGT-A---CAAGA-TTTTG-TGA-CCAT---TTG--AA-AAAAGTGTCCCCA
625 GCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG-G-GCCAA
* * * * ** * * * ******** * ** * ***
16365795 TTTCAAACACTTTAATAG-GC-T-ACTG-GCAGCA-AACCTGTAAAATCTCAAATGCTTTTTAAG
688 GTACCAGCAC--CCATCGCACATCA-TGTGC-GCACACCCCCCGGCCCCCCCGAT-CGTCGGAA-
****** ** * * ** * ** * * * * * *
16365855 GGGGTGTGAGTTC--TCAAGGTT-T--GATGGGGGATAT-GGGGC-CAG-TATA-AGGGC-CAAG
747 CCCCAATGCCTCCGGTC-AGGTTCTCCGACGATGG-TGTCCCGACGAAGAAAAATACGGCACCAG
* * * * * * * ** *
16365910 TACCAGTACCC-ATCGCACATCATGTGC-G-CACACCCCCCGG-CCACCCTCGATC---G--T-C
810 CA-CA-TGCCCGA--GCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCT-GATCTTAGACTGG
**
16365965 G-A--AAC-CCCAATG
870 GAATGAACTCCGTATG
* * ** * ** * * * *** * *
16365977 C--CG-CCGGTCAGGCTCTCTGATGATG-GT--GTC--CCGACG-AA-GA-AAAATGCGGCAC-C
1 CTTAGACTGGGAATGAACTCCG-T-ATGCCTAAGTCAACCCACGAAACGAGCGTACG-GGCGCTC
* * ** * * * * * * ** *
16366030 AGCACATGCCCGA-GCCCAGCATGTGCTA-CC--GCAACCCTC-GAT---CC----C--G-T-CC
63 AGC-C-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCC
* * * * * * *
16366079 GATCTTCAGCTG--GGAA---TGAACTTC-GTATG--CTTAGACTAGGAATGAACTCCGTATGCC
126 GATC--CTGCTGCCGCAACCCT-CAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * ** * *
16366136 TAAGTCAACCCACGAAACGAGCGTGC-GG-GAGCTCAAC-A----AGCCAGAGGGGCGGGATGCG
188 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCG
* * ** ****** * * * * * * *
16366194 CAAGCTGGGGATCAACCGGGTCCCCCTCTGCGTGCT-GTC-GATCCTGC-TA--TCG-CA-ACCC
253 CAAGCTGTGGATCGATAGGGT-GGTAGGTGGGT-TTAGGCACAT-CTTCATATTTCGCCATGCCA
* * * * * ** * ** * * ** * *
16366252 TTGGTC-TGGTTCAATCTTAGATTGGGAA-TGAT-CTCTGTATGCC-TAAGCCAACCGACGAAAC
315 AT-GCCAT--TT--TTC-TGGCTTGTAAATTCATACAATG-GTCCCTTAAGCC-TTC-ATG---T
** * ** * ****** ** * **** * *
16366313 GAACG-GGC-GGGCGGGCACTACATCGGCCAAAGAGGTGGGATGC-CGAAGCCGTGGATCGATAT
368 GAA-GTTTCATGGCAAG-ACGAC-TC-GTTTTCTA--T--TTTTCACG-ATTTTTGAAAC--T-T
* * * * ** * * * * * * **
16366375 GGTGATAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCCTGT
421 --T-TTA---CGG-TTCGGGATTTTTTAAAATTTTT-TCA-G--AAAG--A-GTTT-TGGCC-CC
** * * * ** ** * * * ** *
16366440 AAA-TTCATACA-ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGC-CGAGACGACTC-GTTTT
470 AAACTTGGTAGACGTGAT-CCTT--GTATTTTTTTG--G---CATGCACAAAAAAATTCAG----
**** * ** * * ** * *** *
16366501 CTATTTTTCACTTATTTTGA-AACTTTTTACGGTTGGA-GATTTTTTAAAA---T---CTTTTCA
523 CTA-AAAACTCGAAGTGT-ACAAGATTTT---G-T-GACCATTTGAAAAAAGTGTCCCCATTTCA
* * * * * * * *** * * * * *** *
16366558 G-GAGTTT--TGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTATCATGCACAAAAAA
581 GACACTTTAATGG---C-TAC-TGGCAG-C--AAACC-TGTA-AAATCTCA-AATGCTCTTTAAG
*** * *** * * * * ** * * * **
16366620 ATTTAGCTAAAAACTCGAAGTGT-A-CA-AGATTTTGTGACC-ATTTGAA---AAAAGT----GT
635 GGGT-G-TGAGTTCTCGAGGTTTGATGAGGGA-TAGGGGGCCAATAT-AAGGGCCAAGTACCAG-
* * * * *** * *** ** * *
16366674 C-CCCATTTCAGACACTTTA-ATG-GC-TA-CTGGCAG-CAAACC--T-GT-AAAATCTCAAATG
695 CACCCA--TC-G-CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAA-CCCCAATG
** ** * * * *** * * ** *
16366729 CTCTTTAAGGGGGTGTGAGTTCT-CGAGGTTTGATG-AGGGA-TAGGGCACCAATTTAAGGGC-C
755 C-C--T---CCGGTCAG-GTTCTCCGACG-ATGGTGTCCCGACGA-AG-A--AAAAT-ACGGCAC
* * * * * * * * * * **
16366790 AAGTACCA-GCAACC-ATCACACATCAAGT-CCGCC-TACCCCCCCGGCCCCCTC-GATC----A
807 CAGCA-CATGC--CCGAGC-C-CAGCATGTGCTGCCGCA-ACCCTCGGTCCAGTCTGATCTTAGA
* ** *
16366846 C--CG---GAAC-CCCAATA
866 CTGGGAATGAACTCCGTATG
* * ** * ** * * ** ** *
16366860 C---CACCGGTCAGGTTCTCCGGTGATG-GT--GTC--CCGACGAAGAAAAATGT--GGCACCAG
1 CTTAGACTGGGAATGAACTCC-GT-ATGCCTAAGTCAACCCACGAA-ACGAGCGTACGG--GC-G
* * * * ** * *** *
16366915 CACATGCTCGAGCCATGCATGTGC----TGCTGCAA-CCGTCGG-TCCGATTTGATCTTAGACTG
60 CTCA-GC-CG-GCCA-G-AGGGGCGGGATGC-GCAAGCCG-GGGAT-CGATCGGGTC--CCCCTT
* ** * * * * *
16366974 GGAATGAACT-CCGTATGCTTAGACTG--GGAA---TGAACTCC-GTATG--CTTAGACTGGGAA
115 TGCGTG--CTGCCG-AT-CCT-G-CTGCCGCAACCCT-CAGTCCGGTCTGATCTTAGACTGGGAA
* * * * *
16367030 TGAACTCCGTAT-CCTAAGTCAACCCACGAAACGAGCGTGCGGGC--GC----TTA-ACCGGCCA
173 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCA
* * * * *** **** * * *
16367087 GAGGGGCGGGATGCGTAAGCCGGGGATCG---GCCAGGT--GCCCCTCTACGTGC-TATC--GAT
238 GAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTA-G-GCACATCTTCAT
* * * *** * * ** * *
16367144 -CTT-G-C-TGCCACA-ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACAACGTGTGCC-
301 ATTTCGCCATGCCA-ATGCCATTTTTCTGG-CT--T-GTA-AAT--TCAT--ACAATG-GTCCCT
** * * ** * * * ** **** ****
16367203 TAAGCCAACCAACG-AAACG-AAC-GGGC-GGGCG-GGCGGGCACTATGCCGGCCAGAGAGGCGA
355 TAAGCC-TTC-ATGTGAA-GTTTCATGGCAAGACGACTCGTTTTCTAT--TTTTC----A--CGA
** ** ** * * * * * *
16367263 GATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCAT
409 TTTTTGAAA--C-T---T-TTTACGGT--T-CG-GGATTT-------T-TTAAAATTT-TTTCA-
* * **** ** * * *
16367328 GCCAATGCCATTTTTTTGAGTTGTAAA-TTCATACA-ATGGTCCCTTAAGCCTTCATGTGAAGTT
453 G--AAAG--A--GTTTTG-GCCCCAAACTTGGTAGACGTGAT-CCTT--G---T-AT-T----TT
* * **** ** **** * ** * * **
16367391 TTAATGGCAAG-AC-GACTCGTT-TTCTATTTTTCACGATTTTTGA-AA-CTTTT-T-A-CGGTT
499 TT--TGGCATGCACAAAAAAATTCAGCTA-AAAACTCGAAGTGT-ACAAGATTTTGTGACCATTT
* *** * * *** * * * * *
16367448 CAAAATTTTTTAAACTTTTTTCAAAAAGAGTTT--TGGCCCTAAACTTGGTAGGCATGATCCTTG
560 GAAAAAAGTGT--CCCCATTTC--AGACACTTTAATGG--CT--AC-TGGCA-GCA--AACC-TG
** * * * * ** **** * *** * * * * ** *
16367511 TATATTTTTTTAGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGT-A-CA-AGATTTTGT
612 TA-A-AATCTCA-AATGCTCTTTAAGGGGT--G-TGAGTTCTCGAGGTTTGATGAGGGA-TAGGG
*** ** ** ** * * * *
16367572 TATCAAT-TGAA---AAAAGTGTTCA-CA--TTTCAGACACTTTAAT-T--GC-TA----CTGG-
670 GGCCAATAT-AAGGGCCAAGT-ACCAGCACCCATC-G-CAC-ATCATGTGCGCACACCCCCCGGC
***** * ** * * ** ** * * * * *
16367621 -CAGTAAACTTGT-AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-TGAGGTTTGATG-A
730 CCCCCCGA-TCGTCGGAA-CCCCAATGC-C--T---CCGGTCAG-GTTCTCCGACG-ATGGTGTC
** * ** * * * * * * * * *
16367682 GGGATAGGGGGCCAATATAAGGGC-CAAGTACCA-GCACCCATCGCA-CATCATG-TG-CGCACA
785 CCG--ACGAAG-AAAAAT-ACGGCACCAGCA-CATGC-CCGAGCCCAGCAT-GTGCTGCCGCA-A
* *** * ** ** * ** **
16367742 CCCTCCCGGCCCTCCCGGCCCTCCCGA-TCGCCA-GAAC-CCCAATG
842 CCCT--CGGTCCAGTCTGATCT-TAGACTGGGAATGAACTCCGTATG
* * * *** * * * * * * *** ** * **
16367786 CAGTAGGTCAGGTTCTCCAGCGAT-GGTGTCCCGGTGAA-TAAAAATACGGCACCAGC--ACATG
1 C-TTA-GACTGGGAAT-GAAC--TCCGTATGCC--T-AAGTCAACCCACGAAACGAGCGTACGGG
* * ** * * ** * ** * **
16367847 C-CTGAGCCCAG-CATGTACTGTC-GTAACCCCCGGTCCGGTCTGATCTTAGA-CTGGGATTAAA
58 CGCTCAG-CCGGCCA-G-AGGGGCGGGATGCGCAAG-CCGG--GGATC---GATC-GGG--T-CC
* * ** * ** *
16367908 CTCTGTATGCTTAGACTAGGATGAACTCTTATGCCTAAGTCAACCCAGAAACGAGTCGTCAGCCG
110 CCCT-T-TGCGT-G-CT--GCCGATC-CTGCTGCC---G-CAACCC----TC-AGTC--C-G--G
* ** * * * * * ** * * *
16367973 CTAAGGCGGATGCCAAG-CCGGG-ATGATCGGTCCATCTTTGCATGCTGCTGATCCTGCTATCGC
154 -T----CTGAT-CTTAGACTGGGAATGAAC--TCC--GTATGCCT-AAGC-CAACC-G--A-CGA
* ** ** ** * * * ** ** * * *
16368036 AAC--CCTTG-GTCCGATCTGATCTTA-GACTGGGAATGA-ACTCCGTATGC-CTAAACCAACTG
203 AACGAGCGGGCGGGCGGGCGGAAC-TACG-CCGGCCA-GAGAGGCGGGATGCGC---A--AGCTG
* * ** * ** ** * *** ***
16368095 AAGAATCGAGCGGGCGGGCGG-GCGGACACTACACTGGCCAGAGAGGTGGGA-TTCG-CATG-CA
260 -TGGATCGATAGGGTGGTAGGTG-GG----TTTA--GG-CACA-TCTTCATATTTCGCCATGCCA
* * *** * * * * *** * *
16368156 GTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCTTATTTTTG-CCCTACCAATGCCAT
315 AT-G--CCAT----T--TTTCT-GGCTT--GTA-A-ATTCATACAATGGTCCCT--TAA-GCC--
** * * **
16368220 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAT-GTGAAGTTTCATGGCAAGAC
361 -TTCAT-G--TG-AAGTT--T-C-ATGG---C--AAGACGAC-TCGT----TTTC-T--------
*
16368284 GACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG-TCTGGGATTTTTTAAAATTTCT
398 -A-T--TTTTC-A-----C--GATTTTTGAAACTTTTTACGGTTC-GGGATTTTTTAAAATTT-T
* * ** * *
16368348 TT-AGAAGGAGTTTTGGCCCTAAACTTATTGGACGGGATCCTTGTATTTTTTTTGGCATGCA-AA
449 TTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAA
*
16368411 CAAAAATTGAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
513 -AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
16368476 TTCAGACACTTTCATGGCTATTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGT
577 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGT
* *
16368541 GAGTTCTCAAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
641 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** *
16368606 TATCATGTGCGCACA--------CCCCCCCGATCACCGGAACCCCAATGCCACCGGTCAGGTTCT
706 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCT
* *
16368663 CCGACGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGAGCCCAGCATGTGCTA
771 CCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* *** * *
16368728 CTGCAACCCTCGGTATGGTCCGATCTTAGATTGGGAATGAACTCCGTATG
836 CCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16368778 CTTAGACTGGGAATGAACTCCGTATCCCTAGGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * **
16368843 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * * * *
16368908 TGCTGCCGCAACCCTCAATCCTGTCTGATCTTAGATTGGGAATGAAATCCGTTTGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * **
16368973 CCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGTGGGATACGCAAGCCA
196 CCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTG
* ** * *
16369038 TGGATCGATAGGGCGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCGTGCCAATTCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCGCCATGCCAATGCCATTT
* *
16369103 TTCTGCCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
324 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
16369168 TCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATCTTTT--G
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * **
16369231 -AGGAGTTTTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTATCATGCACAAAAAAA
454 AAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAAA
*
16369295 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
518 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
16369360 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
583 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTC
* ** *
16369425 TCGAGGTTTGATGAGGGATAGGGGGCCGATATAATTGCCAAGTACCAGCACCCATCGCGCATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
16369490 GTGCGCACA--------CCCTCCCGATCG-CTAGAACCCCAATGCAGT-AGGTCAGGTTCTCC-A
712 GTGCGCACACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGC-CTCCGGTCAGGTTCTCCGA
** * * * *
16369544 GCGATGGTGTCCCGGTGAATAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGTCG
775 -CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
16369609 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
839 CAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16369656 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * ** * ** *
16369721 CGGCTAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCATCTTTACGTGCTGTTGAGCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* ** ** *** *
16369786 TGCTACTTCAACCCTTGGTCTAATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
16369851 TCGAAGAATCGAGCAGGCGGGCGGGCAGGCGGACACTGCACCGGCCAGAGAGGCAGGATGCGCAT
196 CCGACGAAAC--G-A-GCGGGCGGGCGGGCGGA-ACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* * *
16369916 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCCCTGCCAATGCC
256 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCC
*
16369981 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
320 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * * * *
16370046 CGACTCATTTTCTACTTTTCATGCTTTTTAAAACTTTTTACGG-TCTGGGATTTTTTAAAATTTC
385 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGGATTTTTTAAAATTTT
* ** * *
16370110 TTCAGAAGGAGTTTTGGCCCCAAACTTATTGGACGGGATCCTTGTATTTTTGTTGGCATGC-CAA
449 TTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCAC-A
* *
16370174 AAAAAATTGAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
512 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
16370239 TTCAGACACTTTCATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGCTGT
577 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG-TGT
*
16370304 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
641 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** *
16370369 TATCATGTGCGCACA---------CCCCCCGATCACCGGAACCTCAATGCCGT-CGGTCAGGTTC
706 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCCGGTCAGGTTC
*
16370424 TCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGAGCCCAGCATGTGCT
770 TCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * ** * * *
16370489 GCCGTAACCGTCAGTCTGGTCCGATCTTAGATTGGAAATGAACTCCGTATG
835 GCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16370540 CTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * ** * * * * ** *
16370605 CGGTC-GAGGGGTGGGATGCGCAAGCTGGGGATTGGCCCGGTCCCCCTCTACATGCTATCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * * * * *
16370669 TACTGCCGCAACTCTCAATCCTGTCTGATCTTAGACTGGGAATGAAATCCGTTTGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * **
16370734 CCGACGAAACGAGCGAGCGGACGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAGCCA
196 CCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTG
* * * *
16370799 TGGATCGATAGGGTGTTAGGTTGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATTCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATTT
* *
16370864 TTCTGGCTTTTAAATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
324 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
16370929 TCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * *
16370994 AAGGAGTTTTGGTCCCAAA-TCTGGTAGACG-GGTCCTTGTATTTTTATTGGCACGCACAAAAAA
454 AAAGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAA
* *
16371057 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAA
517 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16371122 ACACTTTAATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTT
* *
16371187 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
16371252 TGTGCGCACACCCCCC-GCCCCCCCGATCGTCGGAACCCTAATGCCTCCGATCAGGTTCTCCGAC
711 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCTCCGAC
* * * * *
16371316 GATGGTGTCCCGACGAAGAAAAATGCGACACCAGCAGATGCCCGAGCCCAACATGTGCTACCGCA
776 GATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * *** ** *
16371381 ACCATTGGTTTGGTCTGATCTTAGACTCAGAATGAACTTCGTATG
841 ACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
16371426 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAATGAGCATGCGAGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * ** * * ** * *
16371491 CGGCCAAAGGGGCGGGATGCGTAAGCCGGGGATCGATCGCATCCCCATCTATGTGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
** * * * * *
16371556 TATTGCTGCAACCCTCAATCCGATTTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * **
16371621 CCAAGGAAACGAGCGGGCGGGCGGGCGGACACTATGCCGGCCAAAGAGGCGGGATGCGCAAGCCA
196 CCGACGAAACGAGCGGGCGGGCGGGCGGA-ACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTG
* * * * * *
16371686 TGGATCGATTGAGTGGTATGTGGGTTTTGGCACATCTTCATATTTCTACCATGCCAATGGCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATTT
* * *
16371751 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAATTTTCATGACAAGATGAC
324 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * * **
16371816 TCGTTTTCTTTTTTTCATGATTTTTGAAACTTTTTACGATTCAGGATTTTTTTTAATTTTTTCAG
389 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * * *
16371881 AAGGAGTTCTGGTCCCAAACTTAGTAGACGTGATCCTTGTATTTTTTTTGGCATGTACAAAAAAA
454 AAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAAAA
* * * * *
16371946 TTCA-ATGAAAAACTCGAAGTGCACAAGATTTTATGACCATTTGAAAAATGTGTCCCAATTTCAG
518 TTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16372010 ACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTC
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTC
* * *
16372075 TCAAGGTTTGATGAGGGAAAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * * * * * *
16372140 GTGCGCACACCCCCCCG-CCCCCCGATCACCAGAACCCTAGTGCCGCTGATC-GAGTTCTCCGAC
712 GTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAG-GTTCTCCGAC
* * *
16372203 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATCTGCTGCCGTA
776 GATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* ** **
16372268 ACCCTCAGTCTGGT-TCGATCTTAGACTAAGAATGAACTCCGTATG
841 ACCCTCGGTCCAGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16372313 CTTAGACTGGGAATGATCTCCGTATGCCTAAGTCAACCCACGAAACGAGCATACGGACGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * *
16372378 CGACCAGAGGGGCGAGATGCACAAGACC-GAGATCGATCGGG--------TAC---CT--C--T-
66 CGGCCAGAGGGGCGGGATGCGCAAG-CCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATC
* * *
16372426 CTG-T--CGCAATCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCCA
130 CTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * ** * * * * *
16372488 ATTGACGAATCGAGCGAACGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGTGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* * * * **
16372553 ATAGATCGATAGGATGGTAGGTGGGTTGAGGCACATCTTCATATTTTTTCCATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCGCCATGCCAATGCCATT
16372618 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
16372683 CTCATTTTTTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAA-TTTTTCT
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-
* * * * * * * *
16372747 AGAAGGATTTTTGGCCCTAAACATGGTAGAGGTGATCCTGGTATTTTTTTTGGCGTGCACCAAAA
452 AGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAA
** *
16372812 AATTCAGCTAAAAACTAAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTA
516 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16372877 GACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
581 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
* * *
16372942 TCTCGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCACACATC
645 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
16373007 ATGTGCGCACAGACCCCCCAGCCCCCCCGATCGTCGGAACCCTATTACCGT-CAGTCAAGTTCTC
710 ATGTGCGCAC--ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCCGGTCAGGTTCTC
** * *
16373071 CGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGT
772 CGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* *
16373136 TGCAACCCTCGTTTCGGTCTGATCTTAGACTGGTAATGAACTCCGTATGCTTAGACTGGTAATGA
837 CGCAA-CC-C---TCGGTC----C----A---G---T---CT--G-AT-CTTAGACTGGGAATGA
16373201 ACTCCGTATG
876 ACTCCGTATG
* *
16373211 CTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* ** * ** * *
16373276 TGGTGAGAGGGGCGAGATGCGCAAGCTAGGGATC-AGTCGGGTCCCCCTCTGCGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTTTGCGTGCTGCCGATC
* * * * * *
16373340 CTACTTCCACAACCCTCAGTCCGATCAGATCTTAGACGGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
16373405 ACCGACGAAACGAGC--G-GGG-GGGC---ACTACGCAGGCCAGAGAGGCGGGATGCGCAAGCCG
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTG
* **
16373463 TGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACCATGCCAATGCCATTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCGCCATGCCAATGCCATTT
* *
16373528 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCCTCATGTGAATTTTCATGGCAAGACGAC
324 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * * * *
16373593 ACATTATT-TATTTTTGACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTAA
389 TCGTT-TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * * * *
16373657 GAAGGACTTTTGGCCCCAAAATTCGTAGACGTCATCCTTGTATTTTTTTTGGTATGCACAAAAAA
453 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAAA
16373722 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAG
517 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
16373786 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTT
* * * *
16373851 CTCGAGGTTTGATGAGGGATAAGTGGCCAATATAAGGACCAAGTACCAGCACCCATCGCACGTCA
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
16373916 TGTGC-C-CA-----C--ACCCCCTGATCGCCGGAACCCCAATGCCAT-CGGTAAGATTCTCCGA
711 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCCGGTCAGGTTCTCCGA
* ** * * * * *
16373971 CGATGGTGTCCCGACGTAGAAAAATGTGGCCCCAGCACATGCCTGAGCCCAGCATTTGCTACAGC
775 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
**
16374036 AACCCTCAATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
840 AACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16374082 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * ** * *
16374147 CGACCAGAGTGGCAGGATGCGCAAGCCGAGGATCGATC-GGTCCCCCGCTGTGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* ** * * * * * * *
16374211 TACTATCACAACCCT-TGATCTGATCTGATCTTAGACTGGGAATAAACTCCATATGCCTAAGCTA
131 TGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * ** * * ** * *
16374275 ACCGATGAAACAAGCTAGCGGGCGGGTGGGCACTACGCCAACCAGAGAGCCGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGG-CGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* *
16374340 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCAATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATT
* * *
16374405 TTTATGGCTTGTAAATTCATACAATGGCCCCTTAAGCCTTCATGTGAAGTTTCGTGGCAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
16374470 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * *
16374534 GAAAGAGTTTTGGCCCCAAACTTTGTAGACATGATCCTTGTATTCCTGTTGGCATGCACAAAAAA
453 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT-TTTTTGGCATGCAC-AAAAA
* *
16374599 AATTCGGCTAAAAACTCGAAGTGTACAAGATTTCGTGACCATTTGAAAAAAGTGTCCCCATTTCA
516 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16374664 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGT
581 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
* *
16374729 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATC
645 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
*
16374794 ATGTGCGTACACCCCACCGGGCCCCCCCGATCGTCGGAACCCCAATGCCGT-CGGTCAGGTTCTC
710 ATGTGCGCACACCCC-CC-GGCCCCCCCGATCGTCGGAACCCCAATGCC-TCCGGTCAGGTTCTC
** * *
16374858 CAGA-GATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCGGAGCCCAGCATGTGCTG
772 C-GACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
*
16374922 TCGCAACCCTCGATCCGGTCTGATCCAGCATGTGCTACCGCAACCCTCGATCCGGTCTGATCTTA
836 CCGC-A------A-CC---C---T----C--G-G-T---------C-C-A----GTCTGATCTTA
16374987 GACTGGGAATGAACTCCGTATG
864 GACTGGGAATGAACTCCGTATG
* * * * ** *
16375009 CTTAAACTTGGAATGAACTCCGTATGCCTAAGTGAACCCATGAAACGAGCGTACGGGTACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * * * **
16375074 CGGCTAGAGGGGCAGGATACGCAAGTCGGGGATCGATCGGGTCCCCCTCTGTGTGCTGAAGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* * * * *
16375139 TGCTACCACAACCCTC-GATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCTA
131 TGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
16375203 ACTGACGAAACGA----GCGGGCGGGC---ACTACACCGGCCAGAGAGGCGGGATGTGCAAG-TC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT-
* *
16375260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTAATATTTCTGCCATGCCAATGCAATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATT
16375325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
** * *
16375390 CTCGTTTTCTATTTTTCACGATTTTCAAAAATTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * * *
16375455 GAAGGAGTTTTGGCTCCAAACTTTGTAGACATGATCCTTGTGTTTTTGTTGGCATGCACAAAAAA
453 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAA
* ** ** * * *
16375520 ATTCAGCTAAAAACTGGTTGTCCATAAGATTTTGTGAGCATTTG-AAAAAGTGTCCCCATTTTAG
517 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
16375584 ACACTTTAATGGCTACTGGCAACAAACCTGCAAAATCTCAAATGCTCTTTAAGTGGGTATGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTT
* **
16375649 CTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCGTCCATCGCACATCA
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * *
16375714 TGTGCGCACACCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGCCGT-CGGTAAGATTCTCCGA
711 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCCGGTCAGGTTCTCCGA
* * ** * * *
16375778 CGATGGTGTCTCGACGCAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTACAGC
775 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
*
16375843 AACCCTCGGTCCAGTTTGATCTTAGACTGGGAATGAACTCCGTATG
840 AACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
16375889 CTTGGACTGGGAATGAACTCTGCATGCCTAAGTCAACCCAAGAAACGAGCATCCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * * * * *
16375954 CGACCAGAGGGGCGAGATGCGTAAGCCGGGGATCTATCGGGTCCCCCTCTGTGTGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
** ** * * * * **
16376019 TGCTATCAAAACCCT-TGATCCGATCTGATCTTAGACTGTGAATAAACTCTATATGCCTAAGCCA
131 TGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * *
16376083 ACCGACGAAACGAGCGGGCGGGCTGGTAGGCACTACGCCGGCCAGAGAGCCGGGATGCGCAAGCT
195 ACCGACGAAACGAGCGGGCGGGC-GGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* * *
16376148 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATATCTGTCGTGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATT
* * *
16376213 TTTTTGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCATGCT-AAGTTTCATGGCAAGATG
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG-TGAAGTTTCATGGCAAGACG
16376277 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTC
387 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
*
16376341 AGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCAC-AAAA
452 AGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAA
16376405 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
516 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
16376470 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGT
581 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG-GTGTGAGT
*
16376535 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATC
645 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
16376600 ATGTGCGTGCAC-CCCCCCTGGGCCCTCCCGATCGTCGGAACCCCGATGCCCCCGGTCAGGTTTT
710 ATGTGC--GCACACCCCCC--GGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCT
* ** * * *
16376664 CCAACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATTTTCTG
771 CCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* *
16376729 CCGCAACCCTCGGTCCGGT-TCGATCTTAGACTGGGAATGAACTTCGTATG
836 CCGCAACCCTCGGTCCAGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * *
16376779 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCGCGAAACGAGTGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
** * * * *
16376844 CGGCCAGAGGGGCGGGATGCTTAAGCTGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
* *
16376909 T-ATGACCGTAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTG-CCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** * *
16376973 ACTGACGAAACGAGTGGGCGGGCGGGCGGGAACAACATCGGTCAGAGAGGCGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* *
16377038 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAACGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCGCCATGCCAATGCCATT
* *
16377103 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTATGGGAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* ** * **
16377168 CTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTACGATTCAAGATTTTTTAAAATTTTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
*
16377233 GAAGGAGTTTTGGCCCCAAAC-TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
453 GAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAA
* *
16377297 ATGCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCAG
517 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
16377362 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTT
582 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG-GTGTGAGTT
* **
16377427 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATAAGCACCCATCGCACATCA
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * ** *
16377492 TGTACGCACACCCCCCTGCCCCCTCGATCGTC-GAAACCCAATGTGGT-CGGTCAGGTTCTCTGA
711 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG-CCTCCGGTCAGGTTCTCCGA
* * * * *
16377555 CGATGGTGTCCCGACGAAGAAAAATGCGGCACTAGAACATGCCCGAGCCAAGCA--TGCTGCGGC
775 CGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* *
16377618 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATG
840 AACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16377664 CTTAGACTGGAAATGAACTCCGTATGCCTAAGTTAACGCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* *
16377729 CGACCAGAGGGG-GGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
*
16377793 TGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * * *
16377858 CAC-ACAAAATGAACGAGCGAGCGGGCTGGCACTATGCCCGCCAGAGAGGCGGGATGCGCAAGCC
196 C-CGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* * * * *
16377922 GTGGATCGATAGGGTGGTAGGTTGGTTTAGGGACATCTTCATATTTATGCCATACCAATTCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-CGCCATGCCAATGCCATT
* * *
16377987 TTTCTGGCTTGTAAATTCATAGAATGGTCCCTTACGTCTTCATGTGAAGTTTCATGGCAAGACGA
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* *
16378052 CTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * * *
16378117 GAAGGAGTTTTGGTCCCAAA-TCAGGTAGACG-GGTCCTTGTATTTTTATTGGCACGCACAAAAA
453 GAAAGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAA
*
16378180 AATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
516 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* ** *
16378245 GACACTTTAATGTCTACTGGTGGCGAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
581 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
* *
16378310 TCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATC
645 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** *
16378375 ATTTGCGCACACCCCCCGGCCCCCCTCGATCGTCAAAACCTCAATGCCGT-CGGTCAGGTTCTCC
710 ATGTGCGCACACCCCCCGGCCCCCC-CGATCGTCGGAACCCCAATGCC-TCCGGTCAGGTTCTCC
* * * **
16378439 GGCGATGGTGTCCCGACGAAGAAAAATATGACACCAGCACATGCCCGAGCCCAGCATGTGCTATC
773 GACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * *
16378504 ACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATTAACTCCGTATG
838 GCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
** ** * ** * * *
16378552 CTTAGACAAGGAATGAACTTTGTATGCTTAAGTCAACCCATAAAAGGAGCGTACGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * * ** *
16378617 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGAATCGGTCGGGT-CCCCTTCTGCGTGCTATCGATA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTT-TGCGTGCTGCCGATC
* ** * * ** * ** *
16378681 CTACTGCCATAACCTTCGGTCTAGTCTGATTTTAGACTGCTAATGAACTCCGTATGCATAAGCCA
130 CTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * ** * * * * * * *
16378746 ACCAATGAAATGAGTGGGCGGGCGTACGGGCACTATGCCAGCCAAAGAAGCGGGATGCGTAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGC-GGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCT
* *
16378811 GTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTACCATGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCATT
*
16378876 TTTCTGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTG
323 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
16378922 TCAGGTTCTC
Statistics
Matches: 15572, Mismatches: 2567, Indels: 1991
0.77 0.13 0.10
Matches are distributed among these distances:
852 1 0.00
853 1 0.00
854 2 0.00
856 2 0.00
857 4 0.00
859 7 0.00
860 234 0.02
861 518 0.03
862 655 0.04
863 10 0.00
864 7 0.00
865 4 0.00
866 111 0.01
867 8 0.00
868 424 0.03
869 95 0.01
870 94 0.01
871 125 0.01
872 114 0.01
873 19 0.00
874 15 0.00
875 17 0.00
876 18 0.00
877 79 0.01
878 1021 0.07
879 409 0.03
880 225 0.01
881 212 0.01
882 350 0.02
883 536 0.03
884 825 0.05
885 409 0.03
886 417 0.03
887 1232 0.08
888 1044 0.07
889 294 0.02
890 1636 0.11
891 260 0.02
892 983 0.06
893 20 0.00
894 8 0.00
895 3 0.00
896 5 0.00
897 109 0.01
898 135 0.01
899 6 0.00
900 8 0.00
901 22 0.00
902 27 0.00
903 17 0.00
904 24 0.00
905 19 0.00
906 34 0.00
907 12 0.00
908 236 0.02
909 352 0.02
910 11 0.00
911 6 0.00
912 60 0.00
913 41 0.00
914 10 0.00
915 18 0.00
916 46 0.00
917 327 0.02
918 23 0.00
919 181 0.01
920 253 0.02
921 73 0.00
922 11 0.00
923 7 0.00
924 21 0.00
925 26 0.00
926 23 0.00
927 137 0.01
928 98 0.01
929 23 0.00
930 9 0.00
931 12 0.00
932 10 0.00
933 8 0.00
934 13 0.00
935 9 0.00
936 7 0.00
937 8 0.00
938 19 0.00
939 4 0.00
940 1 0.00
941 12 0.00
942 22 0.00
943 17 0.00
944 18 0.00
945 2 0.00
946 5 0.00
947 19 0.00
948 7 0.00
949 2 0.00
950 6 0.00
952 6 0.00
953 7 0.00
954 7 0.00
956 1 0.00
957 1 0.00
958 1 0.00
960 1 0.00
961 2 0.00
963 3 0.00
964 1 0.00
965 1 0.00
966 5 0.00
967 4 0.00
968 12 0.00
969 1 0.00
970 2 0.00
971 2 0.00
972 7 0.00
973 6 0.00
974 2 0.00
975 5 0.00
976 3 0.00
977 8 0.00
979 3 0.00
980 1 0.00
981 2 0.00
982 15 0.00
983 3 0.00
984 1 0.00
985 5 0.00
986 14 0.00
987 12 0.00
988 18 0.00
989 10 0.00
990 18 0.00
991 20 0.00
992 26 0.00
993 6 0.00
994 9 0.00
995 8 0.00
996 12 0.00
997 9 0.00
998 15 0.00
999 5 0.00
1000 9 0.00
1001 23 0.00
1002 9 0.00
1003 9 0.00
1004 5 0.00
1005 11 0.00
1006 3 0.00
1007 24 0.00
1008 9 0.00
1009 14 0.00
1010 3 0.00
1011 16 0.00
1012 4 0.00
1015 3 0.00
1016 5 0.00
1017 13 0.00
1018 3 0.00
1019 1 0.00
1020 2 0.00
1021 3 0.00
1023 2 0.00
1024 693 0.04
1025 182 0.01
1026 92 0.01
1027 64 0.00
1028 160 0.01
1029 158 0.01
1030 49 0.00
1031 252 0.02
1032 72 0.00
1033 81 0.01
1034 36 0.00
1035 70 0.00
1036 52 0.00
1037 58 0.00
1038 40 0.00
1039 60 0.00
1040 88 0.01
1041 58 0.00
1042 82 0.01
1043 37 0.00
1044 67 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (885 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGAACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCTGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCGCCATGCCAATGCCATTTTT
CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
AGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTGGCATGCACAAAAAAATTC
AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
GCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCCGGTCAGGTTCTCCGACGATGG
TGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
CGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16362430 original size:26 final size:26
Alignment explanation
Indices: 16362401--16362452 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
16362391 TCCGGTCCGA
16362401 TCTTACACTGGGAATGAACTCCGTAT
1 TCTTACACTGGGAATGAACTCCGTAT
*
16362427 TCTTAGACTGGGAATGAACTCCGTAT
1 TCTTACACTGGGAATGAACTCCGTAT
16362453 GCCTAAGTCA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.21, G:0.21, T:0.31
Consensus pattern (26 bp):
TCTTACACTGGGAATGAACTCCGTAT
Found at i:16363927 original size:888 final size:885
Alignment explanation
Indices: 16361536--16365285 Score: 4975
Period size: 892 Copynumber: 4.2 Consensus size: 885
16361526 CCGGTCTGAT
* * *
16361536 CTTAGACTGGGAATGAACTCAGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16361601 CGGCCAGAAGGGCGGGATGCGCAAGTCGGGGATCGGTCGTGTCCACCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCC
* * *
16361666 TGCTGCCGCAACCCTCAATCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * *
16361731 CCGACGAAACGAGCGGGCGGGCGAGCGGGTATTACATCGGCCAGATAGGTGGGATGCGCAAGCTG
196 CCGACGAAACGAGCGGGC--G-G-GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
16361796 TGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* **
16361861 TTTTTTCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
322 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
16361926 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTCTT-A
387 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT-TTCA
* * *
16361990 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAC
451 GAAGGAGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16362055 ATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
516 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16362120 ACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGCGTGTGAGTT
581 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * **
16362185 CTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCACACATGT
646 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
16362250 TGTGTGGACACCCCCACCCGACCCCCCCGATC-ACTGGAACCCCAATGCCGCCGGTCAGGTTCTC
711 TGTG-CG-CACACCC-CCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * * * *
16362314 TGACGGTGGTGTCTC-AGCGAAGAAAATTACGGCTCCAGCACATGCCCGAGCCGAGAATGTGCTG
772 CGACGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * *
16362378 CCGCAACCCTCGGTCCGGTCCGATCTTACACTGGGAATGAACTCCGTATT
836 CCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16362428 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16362493 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGTGTCCCCCTTTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCC
* * *
16362558 TGCTGCCACAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCGAA
131 TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
16362623 CCGACGAAACGAGCGGGCGGGCGAGTGGGTACTACGTCGGCCAGAGAGGCGGAATGCGCAAGCTG
196 CCGACGAAACGAGCGGGCGGGC----GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
16362688 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16362753 TTCTGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTAATGTGAAGTTTCATGGCAAGACGAC
322 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * * *
16362818 TCGTTTTTTATTTTTCATGATTTTTGAAAATTTTTACGGTTCGGGATTTTTTAAAATTGTTTCAA
387 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * *
16362883 AAGGAGTTTTGGCCCCAAACTTAGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
452 AAGGAGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
**
16362948 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGGGA
517 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
** *
16363013 CACTTTTTTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTC
582 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * ** *
16363078 TTGAGGTTTAATGAGGGATAGGGGGCCAACATAAGGGTGAAGTACCAGCACCCATCACACATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** *
16363143 GTGCGGACATCCCCACTCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCTG
712 GTGCGCACA-CCCC-C-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* ** * * * *
16363208 ACGATGGTGTCTCGTGGAATAAAAATGTGGCACCAGCACATGCCCGAGCCCAAG-ATGTGCTACT
774 ACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC-AGCATGTGCTGCC
* * *
16363272 GCAACCCTCGGTCTGGTTCGATCTTACACTGGGAATGAACTCTGTATG
838 GCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16363320 CTTAGACTAAGG-ATGAACTCTGTATGCCTAAGTCAACCCACTAAACGAGCGTGCGGGCGCTCAG
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * * *
16363384 CCAGCCAAAGGGACGGAATGGGCAAGCCGAGGATCTG-TCGGGTCCCCCTCTATGTGCTACCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GATCGGGTCCCCCTCTACGTGCTGCCGAT
* * * * *
16363448 CCTACTGCCGCAACTCGCAGTCCGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCC
129 CCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
16363513 AACCGATGAAACGAGCGGGCGGGTGGGCACTACGCCGGCCAGAGAGGCTGGATGCGCAAGCTGTG
194 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTG
16363578 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTT
*
16363643 CTGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
324 CTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTC
* ** * * * *
16363708 GTTTTTTATTTTTCACGATTTTCAAAACTTTTTACGGTTCTGGATTTTTCAAAACTCTTTCAGAA
389 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAA
* * * * *
16363773 TGAGTTTTGGCCCTAAATTTGCTAGACGTGATCCTTGTATTTTTTTTGGCATTCACAAAAAAATT
454 GGAGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* *
16363838 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTTAGACA
519 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* *
16363903 CTTTAATGGCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTC
584 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
16363968 GAGGTTCGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
649 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * * *
16364033 GTGCACACCCCCACCGGCCCCCCCGATCG-CTGGAACCGCAATGCTGCCGGTTAGGTTCTCCGAT
714 GCGCACA-CCCC-CCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
** * * * *
16364097 GATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCAAATGCCCGA-CCACAACATGTGCTGCCAC
776 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC-CAGCATGTGCTGCCGC
*
16364161 AA----C---CC---TCGATC-----C---G-AT----T-TG-AT-
840 AACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16364181 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGTGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16364246 CGGCCAGAGGGGCGGGATGCACAAGCCGGGCATCGACCGGGTCCCCCTTTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCC
* * *
16364311 TGCTGCCGCAACCCTC-GATGCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
16364375 ACCGATGAAACGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGTGGGATGCGCATGCCGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
*
16364440 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TGCCATGCCCATGCCATTTTTC
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTC
* * *
16364504 TAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACCACTCA
325 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
* * * *
16364569 TTTTTTATTTTTCACAATTTTTGAAACATTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAG
390 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAG
* * *
16364634 GAGTTTTGGCCCCAAACTTGGTAGACGGGATCCTTGTATTTTTGTTGGCACGCACAAAAAAATTC
455 GAGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * *
16364699 AGCTAAAAAGTCGAAGTGTACAAGATTTTGTAACCTATTTGAAAAAAGTGTCCCCATTTTAGACA
520 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC-ATTTGAAAAAAGTGTCCCCATTTCAGACA
*
16364764 CTTTAATCGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
584 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * * *
16364829 AAGGTTTGATGAGGGATAAGAGACCAATATGAGGGCCAAGTACCAGCACCCATCGCACATCATGT
649 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * ** *
16364894 GCGCAAAACCCCCCGGCTCCGCCCGATATTCGGAACCCCAATGCCGTCGGTTAGGTTCTCCGACG
714 GCGC-ACACCCCCCGGC-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
* ** * * *
16364959 ATGGGGTCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCTGTATGTGTTGCCGCAA
777 ATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* * * *
16365024 CCCTCGGGCCGATCCGATCTTAGACTGGGAATGAACTCTGTATG
842 CCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16365068 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGCGCGGGTGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** *
16365133 CGGCCAGAGGGGCAGGATGCACAAGCTAGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCC
* * ** * * *
16365198 TG-T-CATCGCAACCCTCGGTCCAGTCCAATCTTAGATTGGGAATGAACTTCGTATGCCTAAGTC
131 TGCTGC--CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
16365261 AACCCACGAAACGAGCGTGCGGGCG
194 AACCGACGAAACGAGCGGGCGGGCG
16365286 CTCAGTCGGC
Statistics
Matches: 2537, Mismatches: 268, Indels: 111
0.87 0.09 0.04
Matches are distributed among these distances:
860 238 0.09
861 508 0.20
862 7 0.00
863 2 0.00
864 1 0.00
865 1 0.00
868 4 0.00
869 1 0.00
871 5 0.00
872 1 0.00
876 1 0.00
877 6 0.00
879 1 0.00
880 3 0.00
883 1 0.00
884 1 0.00
885 3 0.00
886 7 0.00
887 277 0.11
888 471 0.19
889 1 0.00
890 4 0.00
891 7 0.00
892 980 0.39
893 6 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (885 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGCCGATCC
TGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT
GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGG
AGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
GCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGG
TGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
CGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16365078 original size:26 final size:26
Alignment explanation
Indices: 16365042--16365094 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16365032 CCGATCCGAT
*
16365042 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16365068 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16365094 C
1 C
16365095 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16365323 original size:159 final size:158
Alignment explanation
Indices: 16365068--16365459 Score: 468
Period size: 159 Copynumber: 2.5 Consensus size: 158
16365058 ACTCTGTATG
* * * *
16365068 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGCGCGGGTGCTTAGC
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGCGCGGGCGCTCAGC
16365133 CGGCCAGAGGGGCAGGATGCACAAGCTAGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATCC
66 CGGCCAGAGGGGCAGGATGCACAAGCTAGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATCC
* **
16365198 TG-TCATCGCAACCCTC-GGTCCAGTCCAAT
131 AGCTC--CGCAACCCTCAACT-CAGTCCAAT
* * *
16365227 CTTAGATTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGCGCGGGCGCTCAGC
* ** * * * *
16365292 CGGCCAGAGGGGCGGGATGCGTAAGGC-AGGGATCGATCGGGTCCCCCTCTGCGTGTTGCTGATC
66 CGGCCAGAGGGGCAGGATGCACAA-GCTAGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATC
** *
16365356 CAGCTGCCGCAACCCTCAACTTGGTTCAAT
130 CAGCT-CCGCAACCCTCAACTCAGTCCAAT
* * * * * *
16365386 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGTGGGCGGGCACT-ACG
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGCGCGGGCGCTCA-G
16365450 CCGGCCAGAG
65 CCGGCCAGAG
16365460 ATGGGGATGC
Statistics
Matches: 200, Mismatches: 28, Indels: 10
0.84 0.12 0.04
Matches are distributed among these distances:
158 1 0.00
159 194 0.97
160 4 0.02
161 1 0.00
ACGTcount: A:0.23, C:0.29, G:0.29, T:0.19
Consensus pattern (158 bp):
CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGCGCGGGCGCTCAGC
CGGCCAGAGGGGCAGGATGCACAAGCTAGGGATCGATCGGGTCCCCCTCTACGTGCTACCGATCC
AGCTCCGCAACCCTCAACTCAGTCCAAT
Found at i:16366994 original size:26 final size:26
Alignment explanation
Indices: 16366965--16367041 Score: 154
Period size: 26 Copynumber: 3.0 Consensus size: 26
16366955 CCGATTTGAT
16366965 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16366991 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16367017 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16367042 CCTAAGTCAA
Statistics
Matches: 51, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.19, G:0.26, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16367756 original size:9 final size:9
Alignment explanation
Indices: 16367742--16367767 Score: 52
Period size: 9 Copynumber: 2.9 Consensus size: 9
16367732 TGTGCGCACA
16367742 CCCTCCCGG
1 CCCTCCCGG
16367751 CCCTCCCGG
1 CCCTCCCGG
16367760 CCCTCCCG
1 CCCTCCCG
16367768 ATCGCCAGAA
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 17 1.00
ACGTcount: A:0.00, C:0.69, G:0.19, T:0.12
Consensus pattern (9 bp):
CCCTCCCGG
Found at i:16367920 original size:26 final size:24
Alignment explanation
Indices: 16367891--16367941 Score: 66
Period size: 26 Copynumber: 2.0 Consensus size: 24
16367881 CCGGTCTGAT
*
16367891 CTTAGACTGGGATTAAACTCTGTATG
1 CTTAGACTAGGA-TAAACTCT-TATG
*
16367917 CTTAGACTAGGATGAACTCTTATG
1 CTTAGACTAGGATAAACTCTTATG
16367941 C
1 C
16367942 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
24 5 0.22
25 7 0.30
26 11 0.48
ACGTcount: A:0.27, C:0.18, G:0.22, T:0.33
Consensus pattern (24 bp):
CTTAGACTAGGATAAACTCTTATG
Found at i:16368781 original size:26 final size:26
Alignment explanation
Indices: 16368752--16368802 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16368742 ATGGTCCGAT
*
16368752 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16368778 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16368803 CCCTAGGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16369521 original size:878 final size:880
Alignment explanation
Indices: 16368759--16378921 Score: 12342
Period size: 887 Copynumber: 11.4 Consensus size: 880
16368749 GATCTTAGAT
* * *
16368759 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATCCCTAGGTCAACCCATGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* *
16368824 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * ** *
16368889 CTCTACGTGCTATCGATCCTGCTGCCGCAACCCTCAATCCTGTCTGATCTTAGATTGGGAATGAA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAA
* * *
16368954 ATCCGTTTGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCTGGCCAGAG
196 CTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAG
* * * * *
16369019 AGGTGGGATACGCAAGCCATGGATCGATAGGGCGGTAGGTGGGTTTAGGCACATCTTCATATTTT
261 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * * * *
16369084 TTCCGTGCCAATTCCATTTTTCTGCCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
326 TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
*
16369149 AGTTTCATGGCAAGACGACTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
391 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
* *
16369214 TTTTTTAAAATCTTTT-G-AGGAGTTTTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTG
456 TTTTTTAAAATTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
** *
16369277 TTATCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAA
521 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
16369342 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
586 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* **
16369407 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCGATATAATTGCCAAGTACCA
651 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * * * *
16369472 GCACCCATCGCGCATCATGTGCGCACACCCTCCCGATCGCTAGAACCCCAATGCAGTAGGTCAGG
716 GCACCCATCGCACATCATGTGCGCACACCCCCCCGATCGCTGGAACCCCAATGCCGTCGGTCAGG
** * *
16369537 TTCTCC-AGCGATGGTGTCCCGGTGAATAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
781 TTCTCCGA-CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* *
16369601 TGCT-GTCGCAACCCTCGGTCCGGTCTGATCTTAGAC
845 TGCTACT-GCAACCCTCGGTCCGGTCCGATCTTAGAC
* * *
16369637 TGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACTCACGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * **
16369702 GAGCGTGCGGGCGCTCAGCCGGCTAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCAT
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * * * * ** * *
16369767 CTTTACGTGCTGTTGAGCCTGCTACTTCAACCCTTGGT-CTAATCTGATCTTAGACTGGGAATGA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCT-GTCTGATCTTAGACTGGGAATGA
* * * * * * *
16369831 ACTCCGTATGCCTAAACCAATCGAAGAATCGAGC-AGGCGGGCGGGCAGGCGGACACTGCACCGG
195 ACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGA-GCGGGCGGGC--G-GG-CACTACGCCGG
* * *
16369895 CCAGAGAGGCAGGATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCA
255 CCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* *
16369960 TATTTCTGCCCTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
320 TATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * *
16370025 ATGTGAAGTTTCATGGCAAGACGACTCATTTTCTACTTTTCATGCTTTTTAAAACTTTTTACGG-
385 ATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGT
* ** * *
16370089 TCTGGGATTTTTTAAAATTTCTTCAGAAGGAGTTTTGGCCCCAAACTTATTGGACGGGATCCTTG
450 TC-GGGATTTTTTAAAATTT-TTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
16370154 TATTTTTGTTGGCATGC-CAAAAAAAATTGAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACC
513 TATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
16370218 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTCATGGCTACTGGCAGCAAACCTATAAAATCTC
577 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* *
16370283 AAATGCTCTTTAAGGGGCTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
642 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * *
16370348 CAAGTACCAGCACCCATCGCATATCATGTGCGCACA-CCCCCCGATCACCGGAACCTCAATGCCG
707 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGATCGCTGGAACCCCAATGCCG
* *
16370412 TCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGAGC
772 TCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * * * *
16370477 CCAGCATGTGCTGCCGTAACCGTCAGTCTGGTCCGATCTTAGAT
837 CCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * *
16370521 TGGAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAAT
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * ** *
16370586 GAGCGTGCGGGCGCTCAGCCGGTC-GAGGGGTGGGATGCGCAAGCTGGGGATTGGCCCGGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * * * * * **
16370650 CTCTACATGCTATCGATCTTACTGCCGCAACTCTCAATCCTGTCTGATCTTAGACTGGGAATGAA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAA
* * * * *
16370715 ATCCGTTTGCCTAAGCCAACCGACGAAACGAGCGAGCGGACGGGCGGGCACTACGCTGGCCAGAG
196 CTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAG
* * *
16370780 AGGCGGGATGCGCAAGCCATGGATCGATAGGGTGTTAGGTTGGTTTAGGCACATCTTCATATTTC
261 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * * *
16370845 TGCCGTGCCAATTCCATTTTTCTGGCTTTTAAATTCATAAAATGGTCCCTTAAGCCTTCATGTGA
326 TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
*
16370910 AGTTTCATGGCAAGACGACTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
391 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
* *
16370975 TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGTCCCAAA-TCTGGTAGACG-GGTCCTTGTATTTT
456 TTTTTTAAAATTTTTT-AGAAGGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATTTT
* * *
16371038 TATTGGCACGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAA
519 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
16371103 AAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCT
584 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
16371168 CTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
649 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* *
16371233 CAGCACCCATTGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCG-TCGGAACCCTAATGCC
714 CAGCACCCATCGCACATCATGTGCGCACA-------CCCCCCCGATCGCT-GGAACCCCAATGCC
* * *
16371297 -TCCGATCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCAGATGCCCGA
771 GT-CGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * * ** *
16371361 GCCCAACATGTGCTACCGCAACCATTGGTTTGGTCTGATCTTAGAC
835 GCCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
** * * *
16371407 TCAGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAAT
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * **
16371472 GAGCATGCGAGTGCTCAGCCGGCCAAAGGGGCGGGATGCGTAAGCCGGGGATCGATCGCATCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* ** * ** * ** *
16371537 ATCTATGTGCTGTCGATCTTATTGCTGCAACCCTCAATCC-GATTTGATCTTAGACTGGGAATGA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTG-TCTGATCTTAGACTGGGAATGA
* * * * * * * *
16371601 ACTTCGTATGCCTAAGCCAACCAAGGAAACGAGCGGGCGGGCGGGCGGACACTATGCCGGCCAAA
195 ACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGA
* * * * *
16371666 GAGGCGGGATGCGCAAGCCATGGATCGATTGAGTGGTATGTGGGTTTTGGCACATCTTCATATTT
260 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
16371731 CTACCATGCCAATGGCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
325 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * * * * *
16371796 AATTTTCATGACAAGATGACTCGTTTTCTTTTTTTCATGATTTTTGAAACTTTTTACGATTCAGG
390 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
** * * *
16371861 ATTTTTTTTAATTTTTTCAGAAGGAGTTCTGGTCCCAAACTTAGTAGACGTGATCCTTGTATTTT
455 ATTTTTTAAAATTTTTT-AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * *
16371926 TTTTGGCATGTACAAAAAAATTCA-ATGAAAAACTCGAAGTGCACAAGATTTTATGACCATTTGA
519 TGTTGGCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
16371990 AAAATGTGTCCCAATTTCAGACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGC
583 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
16372055 TCTTTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGAAAGGGGGCCAATATAAGGGCCAAGTA
648 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * ** * *
16372119 CCAGCACCTATCGCACATCATGTGCGCACACCCCCCCGCCCCCCGATCACCAGAACCCTAGTGCC
713 CCAGCACCCATCGCACATCATGTGCGCACA------C-CCCCCCGATCGCTGGAACCCCAATGCC
*
16372184 G-CTGATC-GAGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
771 GTC-GGTCAG-GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * * * *
16372247 AGCCCAGCATCTGCTGCCGTAACCCTCAGTCTGGTTCGATCTTAGAC
834 AGCCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
** *
16372294 TAAGAATGAACTCCGTATGCTTAGACTGGGAATGATCTCCGTATGCCTAAGTCAACCCACGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * * * *
16372359 GAGCATACGGACGCTCAGTCGACCAGAGGGGCGAGATGCACAAGACC-GAGATCGATCGGG----
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CCGGGGATCGATCGGGTCCC
* * *
16372419 ----TAC---C--TC--T-CTG-T--CGCAATCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
130 CCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGA
* ** * * * * *
16372469 ACTCCGTATCCCTAAGCCAATTGACGAATCGAGCGAACGGGCGGGCGGGCACTATGTCGGCCAGA
195 ACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGA
* * * * *
16372534 GAGGCGGGATGTGCAAGCCATAGATCGATAGGATGGTAGGTGGGTTGAGGCACATCTTCATATTT
260 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
16372599 TTTCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
325 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * *
16372664 AAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGG
390 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
* * * * *
16372729 ATTTTTTAAAATTTTTCTAGAAGGATTTTTGGCCCTAAACATGGTAGAGGTGATCCTGGTATTTT
455 ATTTTTTAAAATTTTT-TAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * **
16372794 TTTTGGCGTGCACCAAAAAATTCAGCTAAAAACTAAAAGTGTACAAGATTTTGTGACCATTTGAA
519 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
16372859 AAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCT
584 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
16372924 CTTTAAGGGGGTGTGAGTTCTCGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGC
649 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * *
16372989 CAGCACCCATCACACATCATGTGCGCACAGACCCCCCAGCCCCCCCGATCG-TCGGAACCCTATT
714 CAGCACCCATCGCACATCATGTGCG--C--A-----CA-CCCCCCCGATCGCT-GGAACCCCAAT
* * * * *
16373053 ACCGTCAGTCAAGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCTC
768 GCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
**
16373118 GAGCCCAGCATGTGCTGTTGCAACCCTCGTTTCGGTCTGATCTTAGACTGGTAATGAACTCCGTA
833 GAGCCCAGCATGTGCTACTGCAA-CC-C---TC-G---G-TC-----C--G----G---TCCG-A
16373183 TGCTTAGAC
873 T-CTTAGAC
* *
16373192 TGGTAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * ** * **
16373257 GAGCGTACGGGCACTCAGCTGGTGAGAGGGGCGAGATGCGCAAGCTAGGGATC-AGTCGGGTCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCC
* * * * * *
16373321 CCTCTGCGTGCTGTCGATCCTACTTCCACAACCCTCAGTCC-GATCAGATCTTAGACGGGGAATG
130 CCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTG-TCTGATCTTAGACTGGGAATG
*
16373385 AACTCCGTATGCCTAAGCCAACCGACG--A-AA-CGAGC--G-GGG-GGGCACTACGCAGGCCAG
194 AACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAG
*
16373442 AGAGGCGGGATGCGCAAGCCGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
259 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
16373507 TTTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCCTCATGT
324 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
* * * * *
16373572 GAATTTTCATGGCAAGACGACACATTATT-TATTTTTGACGATTTTTGAAACTTTTTACGGTTCG
389 GAAGTTTCATGGCAAGACGACTCGTT-TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG
* * * * * *
16373636 AGATTTTTTTAAATTTTTTAAGAAGGACTTTTGGCCCCAAAATTCGTAGACGTCATCCTTGTATT
453 GGATTTTTTAAAATTTTTT-AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* *
16373701 TTTTTTGGTATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
517 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
16373766 -AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
582 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
16373830 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGTGGCCAATATAAGGACCAAGT
647 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * *
16373895 ACCAGCACCCATCGCACGTCATGTGCCCACA-CCCCCTGATCGCCGGAACCCCAATGCCATCGGT
712 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGATCGCTGGAACCCCAATGCCGTCGGT
* * * * * *
16373959 AAGATTCTCCGACGATGGTGTCCCGACGTAGAAAAATGTGGCCCCAGCACATGCCTGAGCCCAGC
777 CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * ** * *
16374024 ATTTGCTACAGCAACCCTCAATCCAGTCTGATCTTAGAC
842 ATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
*
16374063 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * * *
16374128 GAGCGTGCGGGTGCTTAGTCGACCAGAGTGGCAGGATGCGCAAGCCGAGGATCGATC-GGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * * * * ** * * * *
16374192 CGCTGTGTGCTGCCAATCCTACTATCACAACCCTTGAT-CTGATCTGATCTTAGACTGGGAATAA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTG-TCTGATCTTAGACTGGGAATGA
* * * * * **
16374256 ACTCCATATGCCTAAGCTAACCGATGAAACAAGCTAGCGGGCGGGTGGGCACTACGCCAACCAGA
195 ACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGA
*
16374321 GAGCCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
260 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * * *
16374386 CTTCAATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGCCCCTTAAGCCTTCATGTG
325 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* *
16374451 AAGTTTCGTGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
390 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
* * * * **
16374516 ATTTTTTAAAATTTTTCAGAAAGAGTTTTGGCCCCAAACTTTGTAGACATGATCCTTGTATTCCT
455 ATTTTTTAAAATTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* *
16374581 GTTGGCATGCACAAAAAAAATTCGGCTAAAAACTCGAAGTGTACAAGATTTCGTGACCATTTGAA
520 GTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
16374646 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATTGCT
584 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
16374711 CTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGC
649 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
16374776 CAGCACCCATCGCACATCATGTGCGTACACCCCACCGGGCCCCCCCGATCG-TCGGAACCCCAAT
714 CAGCACCCATCGCACATCATGTGCG--CA---CA-----CCCCCCCGATCGCT-GGAACCCCAAT
**
16374840 GCCGTCGGTCAGGTTCTCCAGA-GATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCC
768 GCCGTCGGTCAGGTTCTCC-GACGATGGTGTCCCGACGAAGAAAAATGC-G-----G--CA--CC
*
16374904 GGAGCCCAGCATGTGCTGTCGCAACCCTCGATCCGGTCTGATCCAGCATGTGCTACCGCAACCCT
822 --AG--CA-CA-------T-G----CC-CGA----G-C----CCAGCATGTGCTACTGCAACCCT
* *
16374969 CGATCCGGTCTGATCTTAGAC
860 CGGTCCGGTCCGATCTTAGAC
* * * *
16374990 TGGGAATGAACTCCGTATGCTTAAACTTGGAATGAACTCCGTATGCCTAAGTGAACCCATGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* ** * * * * *
16375055 GAGCGTACGGGTACTCAGTCGGCTAGAGGGGCAGGATACGCAAGTCGGGGATCGATCGGGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* ** * * * * *
16375120 CTCTGTGTGCTGAAGATCCTGCTACCACAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAA
* * * *
16375185 CTCCGTATGCCCAAGCTAACTGACG--A-AA-CGA----GCGGGCGGGCACTACACCGGCCAGAG
196 CTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAG
* * *
16375242 AGGCGGGATGTGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTAATATTTC
261 AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
*
16375307 TGCCATGCCAATGCAATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
326 TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
* ** * *
16375372 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAATTTTTACGGTTCGAGA
391 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
* * * *
16375437 TTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCTCCAAACTTTGTAGACATGATCCTTGTGTTTTT
456 TTTTTTAAAATTTTTT-AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* ** ** * *
16375502 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTGGTTGTCCATAAGATTTTGTGAGCATTTG-AA
520 GTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
* * *
16375566 AAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAACAAACCTGCAAAATCTCAAATGCTC
585 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * *
16375631 TTTAAGTGGGTATGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
650 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
**
16375696 AGCGTCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCGATCG-TCGGAACCCCAATGCC
715 AGCACCCATCGCACATCATGTGCGCACA--------CCCCCCCGATCGCT-GGAACCCCAATGCC
* * * * * *
16375760 GTCGGTAAGATTCTCCGACGATGGTGTCTCGACGCAGAAAAATGTGGCACCAGCACATGCCTGAG
771 GTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * **
16375825 CCCAGCATGTGCTACAGCAACCCTCGGTCCAGTTTGATCTTAGAC
836 CCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * * *
16375870 TGGGAATGAACTCCGTATGCTTGGACTGGGAATGAACTCTGCATGCCTAAGTCAACCCAAGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * *
16375935 GAGCATCCGGGCGCTCAGCCGACCAGAGGGGCGAGATGCGTAAGCCGGGGATCTATCGGGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* ** ** * * * *
16376000 CTCTGTGTGCTG-CTGATCCTGCTATCAAAACCCTTGATCC-GATCTGATCTTAGACTGTGAATA
131 CTCTGCGTGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCCTG-TCTGATCTTAGACTGGGAATG
** * * * **
16376063 AACTCTATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCTGGTAGGCACTACGCCGGCCAG
194 AACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAG
* * *
16376128 AGAGCCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATA
259 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * *
16376193 TCTGTCGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCATGC
324 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG-
* *
16376258 T-AAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG
388 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG
* * *
16376322 GGATTTTTTAAAATTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTT
453 GGATTTTTTAAAATTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
16376387 TTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
518 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
16376451 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
583 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
16376516 TCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTG
648 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
16376581 CCAGCACCCATCGCACATCATGTGCGTGCACCCCCCCTGGGCCCTCCCGATCG-TCGGAACCCCG
713 CCAGCACCCATCGCACATCATGTGC--GCA----CAC----CCC-CCCGATCGCT-GGAACCCCA
** * * ** *
16376645 ATGCCCCCGGTCAGGTTTTCCAACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGC
766 ATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGC
* * * * * *
16376710 TCGAGCCCAGCATTTTCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGAC
831 CCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
* *
16376760 TGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCGCGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * ** * *
16376825 GAGTGTACGGGCACTCAGCCGGCCAGAGGGGCGGGATGCTTAAGCTGGGGATCGACCGGGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * * * * *
16376890 CTCTACGTGCTGCCGATCCT-ATGACCGTAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGA
131 CTCTGCGTGCTGTCGATCCTGCTG-CCGCAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGA
* * * * * * ** *
16376954 ACTCCGTATGCCTAAGCCAACTGACGAAACGAGTGGGCGGGCGGGCGGGAACAACATCGGTCAGA
195 ACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGA
16377019 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
260 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
16377084 TTGCCATGCCAACGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
325 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
* * * * ** * **
16377149 AAGTTTTATGGGAAGACGACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTACGATTCAAG
390 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
16377214 ATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC-TGGTAGACGTGATCCTTGTATTTT
455 ATTTTTTAAAATTTTTT-AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
16377278 TGTTGGCATGCACAAAAAAATGCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
519 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
16377343 AAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
584 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
16377408 CTTTAAGGGAGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAT
649 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * * **
16377473 AAGCACCCATCGCACATCATGTACGCACACCCCCCTGCCCCCTCGATCG-TCGAAACCCAATGTG
714 CAGCACCCATCGCACATCATGTGCGCACA-----C--CCCCC-CGATCGCTGGAACCCCAATGCC
* * *
16377537 GTCGGTCAGGTTCTCTGACGATGGTGTCCCGACGAAGAAAAATGCGGCACTAGAACATGCCCGAG
771 GTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * *
16377602 CCAAGCA--TGCTGCGGCAACCCTCGGTCCGGTCTGATCTTAGAC
836 CCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * * *
16377645 TGGGAATGAACTTCGTATGCTTAGACTGGAAATGAACTCCGTATGCCTAAGTTAACGCACGAAAC
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* *
16377710 GAGCGTGCGGGCGCTCAGTCGACCAGAGGGG-GGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * * *
16377774 CTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAA
* * * * * *
16377839 CTCCGTATGCCTAAGCCAACAC-ACAAAATGAA-CGAGCGAGCGGGCTGGCACTATGCCCGCCAG
196 CTCCGTATGCCTAAGCCAAC-CGACGAAA-CAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAG
* *
16377902 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGGACATCTTCATATT
259 AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * * * *
16377967 TATGCCATACCAATTCCATTTTTCTGGCTTGTAAATTCATAGAATGGTCCCTTACGTCTTCATGT
324 TCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
*
16378032 GAAGTTTCATGGCAAGACGACTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
389 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG
* * *
16378097 GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGTCCCAAA-TCAGGTAGACG-GGTCCTTGTATT
454 GATTTTTTAAAATTTTTT-AGAAGGAGTTTTGGCCCCAAACT-TGGTAGACGTGATCCTTGTATT
* * *
16378160 TTTATTGGCACGCACAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
517 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* ** *
16378225 AAAAAAGTGTCCCCATTTCAGACACTTTAATGTCTACTGGTGGCGAACCTGTAAAATCTCAAATG
582 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
16378290 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGT
647 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * ** *
16378355 ACTAGCACCCATCGCACATCATTTGCGCACACCCCCCGGCCCCCCTCGATCG-TCAAAACCTCAA
712 ACCAGCACCCATCGCACATCATGTGCGCACA--------CCCCCC-CGATCGCT-GGAACCCCAA
* ** *
16378419 TGCCGTCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATATGACACCAGCACATGCC
767 TGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
* *
16378484 CGAGCCCAGCATGTGCTA-TCACAACCCTCGGTCCGGTCTGATCTTAGAC
832 CGAGCCCAGCATGTGCTACT-GCAACCCTCGGTCCGGTCCGATCTTAGAC
* ** ** * ** *
16378533 TGGGAATTAACTCCGTATGCTTAGACAAGGAATGAACTTTGTATGCTTAAGTCAACCCATAAAAG
1 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * *
16378598 GAGCGTACGGGCACTCAACCGGCCAGAGGGGCAGGATGCGCAAGCCGGGAATCGGTCGGGTCCCC
66 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
* * * * ** * * **
16378663 TTCTGCGTGCTATCGATACTACTGCCATAACCTTCGGT-CTAGTCTGATTTTAGACTGCTAATGA
131 CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCT-GTCTGATCTTAGACTGGGAATGA
* * * ** * * ** * * *
16378727 ACTCCGTATGCATAAGCCAACCAATGAAATGAGTGGGCGGGCGTACGGGCACTATGCCAGCCAAA
195 ACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGA
* * *
16378792 GAAGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTT
260 GAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
16378857 CTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTG
325 CTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
16378922 TCAGGTTCTC
Statistics
Matches: 8061, Mismatches: 996, Indels: 445
0.85 0.10 0.05
Matches are distributed among these distances:
868 434 0.05
869 81 0.01
870 81 0.01
871 111 0.01
872 99 0.01
873 10 0.00
874 7 0.00
876 3 0.00
877 60 0.01
878 689 0.09
879 381 0.05
880 230 0.03
881 8 0.00
882 203 0.03
883 116 0.01
884 772 0.10
885 396 0.05
886 318 0.04
887 938 0.12
888 475 0.06
889 258 0.03
890 615 0.08
891 223 0.03
892 2 0.00
893 2 0.00
894 1 0.00
895 2 0.00
896 6 0.00
897 97 0.01
898 113 0.01
899 2 0.00
900 2 0.00
902 4 0.00
903 2 0.00
904 3 0.00
905 4 0.00
906 3 0.00
907 2 0.00
908 147 0.02
909 309 0.04
910 5 0.00
911 4 0.00
912 1 0.00
913 6 0.00
914 5 0.00
915 1 0.00
916 4 0.00
917 126 0.02
918 2 0.00
919 147 0.02
920 259 0.03
921 55 0.01
922 1 0.00
923 1 0.00
924 2 0.00
925 2 0.00
926 1 0.00
927 148 0.02
928 80 0.01
929 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (880 bp):
TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCC
CTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCTGTCTGATCTTAGACTGGGAATGAA
CTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCCGGCCAGAG
AGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
TGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGA
AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA
TTTTTTAAAATTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
GCACCCATCGCACATCATGTGCGCACACCCCCCCGATCGCTGGAACCCCAATGCCGTCGGTCAGG
TTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTACTGCAACCCTCGGTCCGGTCCGATCTTAGAC
Found at i:16369659 original size:26 final size:26
Alignment explanation
Indices: 16369630--16369682 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
16369620 CCGGTCTGAT
16369630 CTTAGACTGGGAATGAAC-TCTGTATG
1 CTTAGACTGGGAATGAACTTC-GTATG
16369656 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
16369682 C
1 C
16369683 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:16370543 original size:26 final size:26
Alignment explanation
Indices: 16370514--16370566 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16370504 CTGGTCCGAT
*
16370514 CTTAGATTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
16370540 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16370566 C
1 C
16370567 CTAGGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16371439 original size:26 final size:26
Alignment explanation
Indices: 16371400--16371452 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16371390 TTGGTCTGAT
*
16371400 CTTAGACTCAGAATGAACTTCGTATG
1 CTTAGACTCAGAATGAACTCCGTATG
**
16371426 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTCAGAATGAACTCCGTATG
16371452 C
1 C
16371453 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTCAGAATGAACTCCGTATG
Found at i:16371767 original size:887 final size:887
Alignment explanation
Indices: 16365227--16378921 Score: 16897
Period size: 878 Copynumber: 15.4 Consensus size: 887
16365217 CCAGTCCAAT
* * *
16365227 CTTAGATTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16365292 CGGCCAGAGGGGCGGGATGCGTAAGGCAGGGATCGATCGGGTCCCCCTCTGCGTGTTG-CTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTC-GATC
** ** * * *
16365356 C-AGCTGCCGCAACCCTCAACTTGGTTC-AATCTTAGATTGGGAATGAACTCCGTATGCCTAAGC
130 CTA-CTGCCGCAACCCTC-GGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
16365419 CAACCGACGAAATGA----GTGGGC--G-GG-CACTACGCCGGCCAGAGATG-GGGATGCGCAAG
193 CAACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAG
* * *
16365475 CCTTGGATCGATAGGGTGGTACGTGGGTTTAGGCACATCTTCATATTTCTGCCTTGCCAATGCCA
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
* *
16365540 TTTTTCTAGCTTGTAAATTAATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
323 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * *
16365605 GACTCGTTTTTTATTTTTCATGA-TTTTAAAACTTTTTACAGTTCGGGATTTTTTAAAATTTTTT
388 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * *
16365669 CAAAAAGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
453 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAAA
16365734 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
16365799 AAACACTTTAATAGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGA
582 AGACACTTTAAT-GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * *
16365864 GTTCTCAAGGTTTGATGGGGGATATGGGGCCAGTATAAGGGCCAAGTACCAGTACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
16365929 TCATGTGCGCACACCCCCCGGCCACCCTCGATCGTCGAAACCCCAATGCCGCCGGTCAGGCTCTC
711 TCATGTGCGCACACCCCCCGGCC-CCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCTC
* *
16365994 TGATGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTAC
774 CGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTAC
* * * *
16366059 CGCAACCCTCGATCCCGTCCGATCTTCAG-CTGGGAATGAACTTCGTATG
839 CGCAACCCTCGGTCCGGTCTGATCTT-AGACTGGGAATGAACTCCGTATG
* * *
16366108 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGAGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * *
16366173 AAGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCAACCGGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * * * * * * *
16366238 TGCTATCGCAACCCTTGGTCTGGT-TCAATCTTAGATTGGGAATGATCTCTGTATGCCTAAGCCA
131 TACTGCCGCAACCCTCGGTCCGATCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * *
16366302 ACCGACGAAACGAACGGGCGGGC--G-GG-CACTACATCGGCCAAAGAGGTGGGATGC-CGAAGC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGC-AAGC
* * *
16366362 CGTGGATCGATATGGTGATAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * *
16366427 TTTTCTGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCGAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* *
16366492 ACTCGTTTTCTATTTTTCACTTA-TTTTGAAACTTTTTACGGTT-GGAGATTTTTTAAAATCTTT
389 ACTCGTTTTCTATTTTTCA-TGATTTTTGAAACTTTTTACGGTTCGG-GATTTTTTAAAATTTTT
* **
16366555 TC---AGGAGTTTTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTATCATGCACAAA
452 TCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAA
*
16366617 AAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
16366682 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
** * * *
16366747 GTTCTCGAGGTTTGATGAGGGATAGGGCACCAATTTAAGGGCCAAGTACCAGCAACCATCACACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * ** * *
16366812 TCAAGTCCGC-CTACCCCCCCGGCCCCCTCGATCACCGGAACCCCAATACCACCGGTCAGGTTCT
711 TCATGTGCGCAC-A-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCT
** * *
16366876 CCGGTGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAG-CCATGCATGTGCT
773 CCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA-GCATGTGCT
* *
16366940 GCTGCAACCGTCGGTCCGATTTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
837 ACCGCAACC--C--T-CG----G-TC-----C--GG--T---CT--G-AT-CTTAGACTGGGAAT
16367005 GAACTCCGTATG
876 GAACTCCGTATG
* *
16367017 CTTAGACTGGGAATGAACTCCGTAT-CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTTAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * *
16367081 CGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGCCAGGTGCCCCTCTACGTGCTATCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * ** *
16367146 TGCTGCCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACAACGTGTGCCTAAGCCAA
131 TACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
16367211 CCAACGAAACGAACGGGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGGCGAGATGCGAAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
16367276 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16367341 TTTTGAG-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTAATGGCAAGACG
326 TTCTG-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAG-TTTCATGGCAAGACG
* *** *
16367405 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAAATTTTTTAAACTTTTTTC
389 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * * *
16367470 AAAAAGAGTTTTGGCCCTAAACTTGGTAGGCATGATCCTTGTATATTTTTTTAGCATGCACAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGAC-GGATCCTTGTAT-TTTTGTTGGCATGCACAAAA
* * * * *
16367535 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTATCAATTGAAAAAAGTGTTCACATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
16367600 AGACACTTTAATTGCTACTGGCAGTAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
16367665 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
16367730 CATGTGCGCACACCCTCCCGGCCCTCCCGGCCCTCCCGATCGCCAGAACCCCAATGCAGTAGGTC
712 CATGTGCGCACACCC-CCCGG------C--CCC-CCCGATCGTCGGAACCCCAATGC-CTCGGTC
** * * *
16367795 AGGTTCTCC-AGCGATGGTGTCCCGGTGAATAAAAATACGGCACCAGCACATGCCTGAGCCCAGC
766 AGGTTCTCCGA-CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* ** * * * * *
16367859 ATGTACTGTCGTAACCCCCGGTCCGGTCTGATCTTAGACTGGGATTAAACTCTGTATG
830 ATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
16367917 CTTAGACTAGG-ATGAACT-CTTATGCCTAAGTCAACCCA-GAAACGA--GT-----CG-TCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * *
16367971 C-GCTA-A--GGC-GGATGC-CAAGCC-GGGAT-GATC-GGTCCATCTTTGCATGCTG-CTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTC-GATC
* ** * *
16368026 CTGCTATCGCAACCCTTGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCA
130 CTACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * * *
16368091 ACTGAAGAATCGAGCGGGCGGGCGGGCGGACACTACACTGGCCAGAGAGGTGGGATTCGCATGCA
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * * *
16368156 GTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCTTATTTTTGCCCTACCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
16368221 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* *
16368286 CTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG-TCTGGGATTTTTTAAAATTTCTTT
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGGATTTTTTAAAATTT-TTT
* ** * *
16368350 -AGAAGGAGTTTTGGCCCTAAACTTATTGGACGGGATCCTTGTATTTTTTTTGGCATGCA-AACA
453 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGAC-GGATCCTTGTATTTTTGTTGGCATGCACAA-A
*
16368413 AAAATTGAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
16368478 CAGACACTTTCATGGCTATTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
16368543 GTTCTCAAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCATA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
** *
16368608 TCATGTGCGCACA--------CCCCCCCGATCACCGGAACCCCAATGCCACCGGTCAGGTTCTCC
711 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCTCC
* * *
16368665 GACGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGAGCCCAGCATGTGCTACT
775 GACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACC
** * *
16368730 GCAACCCTCGGTATGGTCCGATCTTAGATTGGGAATGAACTCCGTATG
840 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16368778 CTTAGACTGGGAATGAACTCCGTATCCCTAGGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16368843 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTACGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * * *
16368908 TGCTGCCGCAACCCTCAATCCTG-TCTGATCTTAGATTGGGAATGAAATCCGTTTGCCTAAGCCA
131 TACTGCCGCAACCCTCGGTCC-GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
16368972 ACCGACGAAACAAGCGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGGTGGGATACGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * * * *
16369037 ATGGATCGATAGGGCGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCGTGCCAATTCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* *
16369102 TTTCTGCCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* *
16369167 CTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATCTTTT--
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* **
16369230 G-AGGAGTTTTGGCCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTATCATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16369294 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
16369359 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* ** *
16369424 CTCGAGGTTTGATGAGGGATAGGGGGCCGATATAATTGCCAAGTACCAGCACCCATCGCGCATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
16369489 TGTGCGCACA--------CCCTCCCGATCG-CTAGAACCCCAATGCAGTAGGTCAGGTTCTCC-A
714 TGTGCGCACACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGC-CTCGGTCAGGTTCTCCGA
** * * **
16369544 GCGATGGTGTCCCGGTGAATAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGTCG
777 -CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
*
16369609 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
841 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
16369656 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * * *
16369721 CGGCTAGAGGGGCAGGATGCGCAAGCCGAGGATCGATCGGGTCCATCTTTACGTGCTGTTGAGCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * ** * ** *
16369786 TGCTACTTCAACCCTTGGTCTAATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAA
131 TACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
16369851 TCGAAGAATCGAGCAGGCGGGCGGGCAGGCGGACACTGCACCGGCCAGAGAGGCAGGATGCGCAT
196 CCGACGAAAC--G-A-GCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAA
* *
16369916 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCCCTGCCAATGCC
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCC
*
16369981 ATTTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
322 ATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* * * * *
16370046 CGACTCATTTTCTACTTTTCATGCTTTTTAAAACTTTTTACGG-TCTGGGATTTTTTAAAATTTC
387 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGGATTTTTTAAAATTTT
** *
16370110 TTCAGAAGGAGTTTTGGCCCCAAACTTATTGGACGGGATCCTTGTATTTTTGTTGGCATGC-CAA
451 TTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAC-GGATCCTTGTATTTTTGTTGGCATGCAC-A
* *
16370174 AAAAAATTGAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
16370239 TTCAGACACTTTCATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGCTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
16370304 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** *
16370369 TATCATGTGCGCACA---------CCCCCCGATCACCGGAACCTCAATGCCGTCGGTCAGGTTCT
709 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCT
* * *
16370425 CCGACGATGGTGTCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGAGCCCAGCATGTGCTG
773 CCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTA
* * * * * * *
16370490 CCGTAACCGTCAGTCTGGTCCGATCTTAGATTGGAAATGAACTCCGTATG
838 CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
16370540 CTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** * * * * *
16370605 CGGTC-GAGGGGTGGGATGCGCAAGCTGGGGATTGGCCCGGTCCCCCTCTACATGCTATCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * *
16370669 TACTGCCGCAACTCTCAATCCTG-TCTGATCTTAGACTGGGAATGAAATCCGTTTGCCTAAGCCA
131 TACTGCCGCAACCCTCGGTCC-GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
16370733 ACCGACGAAACGAGCGAGCGGACGGGCGGGCACTACGCTGGCCAGAGAGGCGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * * *
16370798 ATGGATCGATAGGGTGTTAGGTTGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATTCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* *
16370863 TTTCTGGCTTTTAAATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
16370928 CTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * *
16370993 GAAGGAGTTTTGGTCCCAAA-TCTGGTAGACGGGTCCTTGTATTTTTATTGGCACGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACT-TGGTAGACGGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
16371057 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAA
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16371122 ACACTTTAATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16371187 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
16371252 TGTGCGCACACCCCCC-GCCCCCCCGATCGTCGGAACCCTAATGCCTCCGATCAGGTTCTCCGAC
714 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCT-CGGTCAGGTTCTCCGAC
* * *
16371316 GATGGTGTCCCGACGAAGAAAAATGCGACACCAGCAGATGCCCGAGCCCAACATGTGCTACCGCA
778 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCA
* * ** ** *
16371381 ACCATTGGTTTGGTCTGATCTTAGACTCAGAATGAACTTCGTATG
843 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16371426 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAATGAGCATGCGAGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * ** *
16371491 CGGCCAAAGGGGCGGGATGCGTAAGCCGGGGATCGATCGCATCCCCATCTATGTGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * ** * *
16371556 TATTGCTGCAACCCTCAATCCGATTTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAA
131 TACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
16371621 CCAAGGAAACGAGCGGGCGGGCGGGCGGACACTATGCCGGCCAAAGAGGCGGGATGCGCAAGCCA
196 CCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * * * *
16371686 TGGATCGATTGAGTGGTATGTGGGTTTTGGCACATCTTCATATTTCTACCATGCCAATGGCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
16371751 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAATTTTCATGACAAGATGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * **
16371816 TCGTTTTCTTTTTTTCATGATTTTTGAAACTTTTTACGATTCAGGATTTTTTTTAATTTTTTCAG
391 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * * *
16371881 AAGGAGTTCTGGTCCCAAACTTAGTAGACGTGATCCTTGTATTTTTTTTGGCATGTACAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * * *
16371946 TTCA-ATGAAAAACTCGAAGTGCACAAGATTTTATGACCATTTGAAAAATGTGTCCCAATTTCAG
520 TTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16372010 ACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
16372074 CTCAAGGTTTGATGAGGGAAAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** * * * * *
16372139 TGTGCGCACACCCCCCCG-CCCCCCGATCACCAGAACCCTAGTGCCGCTGATC-GAGTTCTCCGA
714 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTC-GGTCAG-GTTCTCCGA
* * *
16372202 CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATCTGCTGCCGT
777 CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGC
* * **
16372267 AACCCTCAGTCTGGT-TCGATCTTAGACTAAGAATGAACTCCGTATG
842 AACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16372313 CTTAGACTGGGAATGATCTCCGTATGCCTAAGTCAACCCACGAAACGAGCATACGGACGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16372378 CGACCAGAGGGGCGAGATGCACAAGACC-GAGATCGATCGGGT---AC-CT-C-T-C--T-G---
66 CGGCCAGAGGGGCGGGATGCGCAAG-CCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATC
* * *
16372429 ----T--CGCAATCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATCCCTAAGCCA
130 CTACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** * ** * * * *
16372488 ATTGACGAATCGAGCGAACGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGTGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * * * *
16372553 ATAGATCGATAGGATGGTAGGTGGGTTGAGGCACATCTTCATATTTTTTCCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
16372618 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
16372683 CTCATTTTTTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAA-TTTTTCT
390 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-
* * * * * * * *
16372747 AGAAGGATTTTTGGCCCTAAACATGGTAGAGGTGATCCTGGTATTTTTTTTGGCGTGCACCAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAAAA
** *
16372812 AATTCAGCTAAAAACTAAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16372877 GACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
16372942 TCTCGAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCACACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
16373007 ATGTGCGCACAGACCCCCCAGCCCCCCCGATCGTCGGAACCCTATTACCGTCAGTCAAGTTCTCC
713 ATGTGCGCAC--ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCTCC
* * ***
16373072 GACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTT
775 GACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACC
*
16373137 GCAACCCTCGTTTCGGTCTGATCTTAGACTGGTAATGAACTCCGTATGCTTAGACTGGTAATGAA
840 GCAA-CC-C---TC-G---G-TC-----C-GG---T---CT--G-AT-CTTAGACTGGGAATGAA
16373202 CTCCGTATG
879 CTCCGTATG
* * *
16373211 CTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * **
16373276 TGGTGAGAGGGGCGAGATGCGCAAGCTAGGGATC-AGTCGGGTCCCCCTCTGCGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * *
16373340 CTACTTCCACAACCCTCAGTCCGATCAGATCTTAGACGGGGAATGAACTCCGTATGCCTAAGCCA
130 CTACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
*
16373405 ACCGACGAAACGA----GC-GG-GGG-GG-CACTACGCAGGCCAGAGAGGCGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
16373462 GTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* *
16373527 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCCTCATGTGAATTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * * * * *
16373592 CACATTATT-TATTTTTGACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTA
390 CTCGTT-TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * *
16373656 AGAAGGACTTTTGGCCCCAAAATTCGTAGACGTCATCCTTGTATTTTTTTTGGTATGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAAAA
16373721 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
16373785 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
16373850 TCTCGAGGTTTGATGAGGGATAAGTGGCCAATATAAGGACCAAGTACCAGCACCCATCGCACGTC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
16373915 ATGTGC-C-CA-----C--ACCCCCTGATCGCCGGAACCCCAATGCCATCGGTAAGATTCTCCGA
713 ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCTCCGA
* * * * * *
16373971 CGATGGTGTCCCGACGTAGAAAAATGTGGCCCCAGCACATGCCTGAGCCCAGCATTTGCTACAGC
777 CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGC
** *
16374036 AACCCTCAATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATG
842 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16374082 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
16374147 CGACCAGAGTGGCAGGATGCGCAAGCCGAGGATCGATC-GGTCCCCCGCTGTGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
** * * * * * * *
16374211 TACTATCACAACCCTTGATCTGATCTGATCTTAGACTGGGAATAAACTCCATATGCCTAAGCTAA
131 TACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * ** *
16374276 CCGATGAAACAAGCTAGCGGGCGGGTGGGCACTACGCCAACCAGAGAGCCGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
16374341 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCAATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
16374406 TTATGGCTTGTAAATTCATACAATGGCCCCTTAAGCCTTCATGTGAAGTTTCGTGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
*
16374471 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTCAG
391 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * **
16374535 AAAGAGTTTTGGCCCCAAACTTTGTAGACATGATCCTTGTATTCCTGTTGGCATGCACAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGAC-GGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAA
* *
16374600 ATTCGGCTAAAAACTCGAAGTGTACAAGATTTCGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16374665 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16374730 CTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
*
16374795 TGTGCGTACACCCCACCGGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCA
714 TGTGCGCACACCCC-CC-GGCCCCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCTCC-
**
16374860 GA-GATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCGGAGCCCAGCATGTGCTGTC
775 GACGATGGTGTCCCGACGAAGAAAAATGC-G-----G--CA--CC--AG--CA-CA-------T-
*
16374924 GCAACCCTCGATCCGGTCTGATCCAGCATGTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGA
817 G----CC-CGA----G-C----CCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGA
16374989 CTGGGAATGAACTCCGTATG
868 CTGGGAATGAACTCCGTATG
* * * * * ** *
16375009 CTTAAACTTGGAATGAACTCCGTATGCCTAAGTGAACCCATGAAACGAGCGTACGGGTACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * **
16375074 CGGCTAGAGGGGCAGGATACGCAAGTCGGGGATCGATCGGGTCCCCCTCTGTGTGCTGAAGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * * *
16375139 TGCTACCACAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCTAA
131 TACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
16375204 CTGACGAAACGA----GCGGGC--G-GG-CACTACACCGGCCAGAGAGGCGGGATGTGCAAGTCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
16375261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTAATATTTCTGCCATGCCAATGCAATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
16375326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* ** * *
16375391 TCGTTTTCTATTTTTCACGATTTTCAAAAATTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * *
16375456 AAGGAGTTTTGGCTCCAAACTTTGTAGACATGATCCTTGTGTTTTTGTTGGCATGCACAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGAC-GGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* ** ** * * *
16375521 TTCAGCTAAAAACTGGTTGTCCATAAGATTTTGTGAGCATTTG-AAAAAGTGTCCCCATTTTAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
16375585 CACTTTAATGGCTACTGGCAACAAACCTGCAAAATCTCAAATGCTCTTTAAGTGGGTATGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* **
16375650 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCGTCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
16375715 GTGCGCACACCCCCTGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTAAGATTCTCCGACG
715 GTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCTCCGACG
* * * * *
16375780 ATGGTGTCTCGACGCAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTACAGCAA
779 ATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAA
* *
16375845 CCCTCGGTCCAGTTTGATCTTAGACTGGGAATGAACTCCGTATG
844 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
16375889 CTTGGACTGGGAATGAACTCTGCATGCCTAAGTCAACCCAAGAAACGAGCATCCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16375954 CGACCAGAGGGGCGAGATGCGTAAGCCGGGGATCTATCGGGTCCCCCTCTGTGTGCTG-CTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTC-GATC
* ** ** * * * * **
16376018 CTGCTATCAAAACCCTTGATCCGATCTGATCTTAGACTGTGAATAAACTCTATATGCCTAAGCCA
130 CTACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
** *
16376083 ACCGACGAAACGAGCGGGCGGGCTGGTAGG-CACTACGCCGGCCAGAGAGCCGGGATGCGCAAGC
195 ACCGACGAAACGAGCGGGCGGGC-GGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * * *
16376147 TGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATATCTGTCGTGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * *
16376212 TTTTTTGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCATGCT-AAGTTTCATGGCAAGAT
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATG-TGAAGTTTCATGGCAAGAC
*
16376276 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTT
388 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* *
16376340 CAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCAC-AAA
453 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAAA
16376404 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
16376469 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
16376534 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
16376599 CATGTGCGTGCAC-CCCCCCTGGGCCCTCCCGATCGTCGGAACCCCGATGCCCCCGGTCAGGTTT
712 CATGTGC--GCACACCCCCC--GGCCCCCCCGATCGTCGGAACCCCAATG-CCTCGGTCAGGTTC
* ** * * * *
16376663 TCCAACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATTTTCT
772 TCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
16376728 GCCGCAACCCTCGGTCCGGT-TCGATCTTAGACTGGGAATGAACTTCGTATG
837 ACCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16376779 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCGCGAAACGAGTGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * *
16376844 CGGCCAGAGGGGCGGGATGCTTAAGCTGGGGATCGACCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * *
16376909 TA-TGACCGTAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TACTG-CCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** *
16376973 ACTGACGAAACGAGTGGGCGGGCGGGCGGGA-ACAACATCGGTCAGAGAGGCGGGATGCGCAAGC
195 ACCGACGAAACGAGCGGGCGGGCGGGC-GGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* *
16377037 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAACGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* *
16377102 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTATGGGAAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * ** * **
16377167 ACTCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTACGATTCAAGATTTTTTAAAATTTTTTC
389 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
16377232 AGAAGGAGTTTTGGCCCCAAAC-TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACG-GATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
16377296 AATGCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16377361 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* **
16377426 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATAAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * ** *
16377491 ATGTACGCACACCCCCCTGCCCCCTCGATCGTC-GAAACCCAATGTGGTCGGTCAGGTTCTCTGA
713 ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATG-CCTCGGTCAGGTTCTCCGA
* * * * *
16377555 CGATGGTGTCCCGACGAAGAAAAATGCGGCACTAGAACATGCCCGAGCCAAGCA--TGCTGCGGC
777 CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGC
*
16377618 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATG
842 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16377664 CTTAGACTGGAAATGAACTCCGTATGCCTAAGTTAACGCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
16377729 CGACCAGAGGGG-GGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * *
16377793 TGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
16377858 CAC-ACAAAATGAACGAGCGAGCGGGCTGG-CACTATGCCCGCCAGAGAGGCGGGATGCGCAAGC
196 C-CGACGAAACGAGCGGGCGGGCGGGC-GGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * * * *
16377921 CGTGGATCGATAGGGTGGTAGGTTGGTTTAGGGACATCTTCATATTTATGCCATACCAATTCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * *
16377986 TTTTCTGGCTTGTAAATTCATAGAATGGTCCCTTACGTCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
*
16378051 ACTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
389 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * *
16378116 AGAAGGAGTTTTGGTCCCAAA-TCAGGTAGACGGGTCCTTGTATTTTTATTGGCACGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACT-TGGTAGACGGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
16378180 AATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* ** *
16378245 GACACTTTAATGTCTACTGGTGGCGAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
16378310 TCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** *
16378375 ATTTGCGCACACCCCCCGGCCCCCCTCGATCGTCAAAACCTCAATGCCGTCGGTCAGGTTCTCCG
713 ATGTGCGCACACCCCCCGGCCCCCC-CGATCGTCGGAACCCCAATGCC-TCGGTCAGGTTCTCCG
* ** * * *
16378440 GCGATGGTGTCCCGACGAAGAAAAATATGACACCAGCACATGCCCGAGCCCAGCATGTGCTATCA
776 ACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
*
16378505 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATTAACTCCGTATG
841 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
** ** * ** * * * *
16378552 CTTAGACAAGGAATGAACTTTGTATGCTTAAGTCAACCCATAAAAGGAGCGTACGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16378617 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGAATCGGTCGGGTCCCCTTCTGCGTGCTATCGATAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
** * * * ** *
16378682 TACTGCCATAACCTTCGGT-CTAGTCTGATTTTAGACTGCTAATGAACTCCGTATGCATAAGCCA
131 TACTGCCGCAACCCTCGGTCCGA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * ** * * * * * *
16378746 ACCAATGAAATGAGTGGGCGGGCGTACGGGCACTATGCCAGCCAAAGAAGCGGGATGCGTAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
16378811 GTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTACCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
16378876 TTTCTGGCTTGTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTG
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
16378922 TCAGGTTCTC
Statistics
Matches: 11147, Mismatches: 1360, Indels: 606
0.85 0.10 0.05
Matches are distributed among these distances:
861 137 0.01
862 11 0.00
863 17 0.00
864 8 0.00
866 2 0.00
867 6 0.00
868 430 0.04
869 81 0.01
870 87 0.01
871 119 0.01
872 103 0.01
873 7 0.00
874 4 0.00
875 4 0.00
876 6 0.00
877 70 0.01
878 1033 0.09
879 610 0.05
880 348 0.03
881 708 0.06
882 229 0.02
883 320 0.03
884 930 0.08
885 420 0.04
886 468 0.04
887 985 0.09
888 480 0.04
889 262 0.02
890 621 0.06
891 233 0.02
892 2 0.00
893 2 0.00
894 1 0.00
895 3 0.00
896 7 0.00
897 98 0.01
898 126 0.01
899 22 0.00
900 36 0.00
901 3 0.00
902 8 0.00
903 3 0.00
904 6 0.00
905 6 0.00
906 1 0.00
907 6 0.00
908 315 0.03
909 349 0.03
910 10 0.00
911 7 0.00
912 137 0.01
913 70 0.01
915 1 0.00
916 43 0.00
917 340 0.03
918 4 0.00
919 154 0.01
920 246 0.02
921 65 0.01
922 2 0.00
923 2 0.00
924 7 0.00
925 3 0.00
926 85 0.01
927 151 0.01
928 87 0.01
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (887 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCC
TACTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGACACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCTCGGTCAGGTTCTCCGACGAT
GGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACC
CTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
Done.