Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019168159.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_4, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 33012953
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Warning! 65000 characters in sequence are not A, C, G, or T
File 87 of 160
Found at i:16636941 original size:341 final size:337
Alignment explanation
Indices: 16636350--16636989 Score: 996
Period size: 341 Copynumber: 1.9 Consensus size: 337
16636340 GCGGGATGCA
* * * *
16636350 TAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCTAATCCTGCTGCCACAACCCTCGGTCC
1 TAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCAATCCTGCTACCACAACCCTCGGTCC
*
16636415 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGGGCGGGCAGG
66 GGTCCGATCTTAAACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGGGCGGGCAGG
* * *
16636480 CGGGCACTACGTCGGCCAGAGAGGTGGGATGCGTAAGCCGTGAATCGATAGGGTGGTAGGTGGGT
131 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGGT
* * * *
16636545 TTAGGCACATCTTGATATTTCTGCCGTGCCAATGCCATTTTTTTGGCTTGTAAATTGATACAACG
196 TTAGGCACATCTTCATATTTCTGACGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAACG
* *
16636610 GTCCCTTAAGCCTTCATGTTAGGTTTCATGGCAAGACGAGCGTACGAGCGTTCAGCCGGTCAGAG
261 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAGCGTACGAGCGTTCAGCCGGTCAGAG
16636675 GGGTAGGATGTG
326 GGGTAGGATGTG
* ** *
16636687 TAAGCCGGGGATCGA-CTGGGTCCCCCTCTGCATGCTACCGATCCTGCTACTGCAACCCTTGGTC
1 TAAGCCGGGGATCGATC-GGGTCCCCCTCTGCATGCTACCAATCCTGCTACCACAACCCTCGGTC
* *
16636751 TGGTCCGATCTTAAACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATC-AAATGGGCGGGCA
65 CGGTCCGATCTTAAACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-CGAAACGGGCGGGC-
*
16636815 AGTAGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
128 ---AGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAG
*
16636880 GTGGGTTTAGGCACATCTTCATATTTCTGAGGTGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
190 GTGGGTTTAGGCACATCTTCATATTTCTGACGTGCCAATGCCATTTTTCTGGCTTGTAAATTCAT
* *
16636945 ACAATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
255 ACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
16636990 CTCATTTTCT
Statistics
Matches: 273, Mismatches: 24, Indels: 8
0.90 0.08 0.03
Matches are distributed among these distances:
336 1 0.00
337 112 0.41
338 1 0.00
341 159 0.58
ACGTcount: A:0.22, C:0.24, G:0.30, T:0.24
Consensus pattern (337 bp):
TAAGCCGGGGATCGATCGGGTCCCCCTCTGCATGCTACCAATCCTGCTACCACAACCCTCGGTCC
GGTCCGATCTTAAACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGGGCGGGCAGG
CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTGACGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAACG
GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAGCGTACGAGCGTTCAGCCGGTCAGAG
GGGTAGGATGTG
Found at i:16637494 original size:26 final size:26
Alignment explanation
Indices: 16637465--16637517 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16637455 CCAGTCCGAT
*
16637465 CTTAGACTGGTAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16637491 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16637517 C
1 C
16637518 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16638226 original size:26 final size:26
Alignment explanation
Indices: 16638197--16638249 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16638187 CCGGTCCAAT
16638197 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16638223 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16638249 C
1 C
16638250 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16639744 original size:863 final size:861
Alignment explanation
Indices: 16638223--16639979 Score: 2564
Period size: 863 Copynumber: 2.0 Consensus size: 861
16638213 ACTCCGTATG
* *
16638223 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGAGCGCTCAGC
* *
16638288 CGGCCAAGGGGCGGGATGCGCAAGCTAGGGATCGACCGGGTCCCCCTCTGCGAGCTACTGATCCT
66 CGGCCAAGGGGCGGGATGCGCAAGCTAGGGATCGACCGGGTCCCCCACTGCGAGCTACTGATACT
* * *
16638353 GCTGCCGCAACCCTCAGTCCAGTCCGATCTTACACTGAAAATGAACTCTGTATGCCTAAGCCAAC
131 GCTGCCACAACCCTCAGTCCAGTCCAATCTTACACTGAAAATGAACTCCGTATGCCTAAGCCAAC
* *
16638418 CGACGAAATAGGCGGGCGAGCGGGCACTACGCCAGGCAGAGAGACAGGATGCGCAAGTCGTGGAT
196 CGACGAAAGAGGCGGGCGAGAGGGCACTACGCCAGGCAGAGAGACAGGATGCGCAAGTCGTGGAT
* * * ** *
16638483 CAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTGTGCCAATTTCGTTTTTCTG
261 CAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGCGCCAATGCCATTTTTCTG
* *** *
16638548 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTGGTGGCAAGATGACTCGTT
326 GCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGATGACTCCTT
** * *
16638613 TTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTTGGGACTTTTAAAATTTTTTCAGAAGGAG
391 TTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGACTTTTAAAATTTTTTCAGAAGGAG
**
16638678 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTACTTTTGTTGGCATGCACAAAAAAATTCAGC
456 TTTTCACCCCAAACTTGGTAGACGTGATCCTTGTACTTTTGTTGGCATGCACAAAAAAATTCAGC
*
16638743 TAAAAACTTCAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTCCAGACACTTT
521 TAAAAACTTCAAGTGTACAAGATTTTGTAACCATTCGAAAAAAGTGTCCCCATTCCAGACACTTT
* * * **
16638808 AATGGCTGCTGGCAGCAAACCTATAAAATCTCAAATGCCCTTTAAGGGGGTTTGAGTTCTTGAGG
586 AATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCCCTTTAAGGGGGTGTGAGTTCTCCAGG
* *
16638873 TTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
651 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGC
* * * *
16638938 ACACCCCC-CCGGTCCCCCC-C-ATCGTCGAAACCCCAATGTCGCCGGTCAGGTTCTCCGA-CGA
716 ACACCCCCACCCGCCCCCCCTCGATCGTCGAAACCCCAATGCCACCGGTCAGGTTCT-CGAGCGA
* *
16638999 TGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGGCCGAGCCCAGCATGTGCT-ATCGCAA
780 TGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGA-CGCAA
**
16639063 CCCTCGGTCCGATCTGAT
844 CCCTCACTCCGATCTGAT
*
16639081 CTTAGACTGGGAATGAACTCCGTATGCCTAATTCAACCCACAAAACGAGCGTGCGAGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGAGCGCTCAGC
* * * ** * *
16639146 TGGCCAGAGGGGCGGGATGCGTAAG-TCGGGGATCGGTCGGGTCCCCCACTGCGTGCT-GTCGAT
66 CGGCCA-AGGGGCGGGATGCGCAAGCT-AGGGATCGACCGGGTCCCCCACTGCGAGCTACT-GAT
* * ** * * **
16639209 ACTGCTGTCACAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
128 ACTGCTGCCACAACCCTCAGTCCAGTCCAATCTTACACTGAAAATGAACTCCGTATGCCTAAGCC
* * * * * *
16639274 AACCGACGAAACGAGGGGGCGGGCTG-GAGGGCATTACGTC-GGCCAGAGAGCCGGGGTGC-TAA
193 AACCGACGAAA-GA---GGCGGGC-GAGAGGGCACTACGCCAGG-CAGAGAGACAGGATGCGCAA
* * **
16639336 GTTGTGGCTTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGCGCCAATGCC
252 GTCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGCGCCAATGCC
16639401 ATTTTTCTGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGA
317 ATTTTTCTGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGA
* *
16639466 TGACTCCTTTTCTATTTTTCACGATTTTCAAAATTTTTTACGGTTTGAGATTTTTTAAAATTTTT
382 TGACTCCTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGA-CTTTTAAAATTTTT
* *
16639531 TCAGAAGGAGTTTTCACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
446 TCAGAAGGAGTTTTCACCCCAAACTTGGTAGACGTGATCCTTGTACTTTTGTTGGCATGCACAAA
* * *
16639596 AAAATTCAGCTAAAAAC-TCAAAGTGTACAAGATTTTGTAACCATTTGAAAAATGTTTCCCCATT
511 AAAATTCAGCTAAAAACTTC-AAGTGTACAAGATTTTGTAACCATTCGAAAAAAGTGTCCCCATT
* * *
16639660 TCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
575 CCAGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCCCTTTAAGGGGGTGTG
16639725 AGTTCTCCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCAC
640 AGTTCTCCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCAC
16639790 ATCATGTGCGCACACCCCCTACCCGCCCCCCCTCGATCGTCGAAACCCCAATGCCACCGGTCAGG
705 ATCATGTGCGCACACCCCC-ACCCGCCCCCCCTCGATCGTCGAAACCCCAATGCCACCGGTCAGG
* * * *
16639855 TTCTCTAGTGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCGGCATGT
769 TTCTCGAGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
16639920 GCTGACGCAACCCTCACTCCGATCTGAT
834 GCTGACGCAACCCTCACTCCGATCTGAT
*
16639948 CTTAGACTGAGAATGAACTCCGTATGCCTAAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAG
16639980 CCACCGATGA
Statistics
Matches: 798, Mismatches: 84, Indels: 25
0.88 0.09 0.03
Matches are distributed among these distances:
858 69 0.09
859 109 0.14
860 1 0.00
862 166 0.21
863 301 0.38
864 1 0.00
865 9 0.01
866 3 0.00
867 138 0.17
868 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (861 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGAGCGCTCAGC
CGGCCAAGGGGCGGGATGCGCAAGCTAGGGATCGACCGGGTCCCCCACTGCGAGCTACTGATACT
GCTGCCACAACCCTCAGTCCAGTCCAATCTTACACTGAAAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAAGAGGCGGGCGAGAGGGCACTACGCCAGGCAGAGAGACAGGATGCGCAAGTCGTGGAT
CAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGCGCCAATGCCATTTTTCTG
GCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCACGGCAAGATGACTCCTT
TTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGACTTTTAAAATTTTTTCAGAAGGAG
TTTTCACCCCAAACTTGGTAGACGTGATCCTTGTACTTTTGTTGGCATGCACAAAAAAATTCAGC
TAAAAACTTCAAGTGTACAAGATTTTGTAACCATTCGAAAAAAGTGTCCCCATTCCAGACACTTT
AATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCCCTTTAAGGGGGTGTGAGTTCTCCAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGC
ACACCCCCACCCGCCCCCCCTCGATCGTCGAAACCCCAATGCCACCGGTCAGGTTCTCGAGCGAT
GGTGTCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGACGCAACC
CTCACTCCGATCTGAT
Found at i:16641571 original size:26 final size:26
Alignment explanation
Indices: 16641542--16641591 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
16641532 GTCTGATCTG
16641542 AGACTGGGAATGAACTTCGTATGCTT
1 AGACTGGGAATGAACTTCGTATGCTT
16641568 AGACTGGGAATGAACTTCGTATGC
1 AGACTGGGAATGAACTTCGTATGC
16641592 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.16, G:0.28, T:0.28
Consensus pattern (26 bp):
AGACTGGGAATGAACTTCGTATGCTT
Found at i:16642437 original size:26 final size:26
Alignment explanation
Indices: 16642408--16642458 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
16642398 TGTCCGATCA
16642408 TAGACT-AGGAATGAACTCCGTATGCT
1 TAGACTGA-GAATGAACTCCGTATGCT
16642434 TAGACTGAGAATGAACTCCGTATGC
1 TAGACTGAGAATGAACTCCGTATGC
16642459 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.31, C:0.20, G:0.24, T:0.25
Consensus pattern (26 bp):
TAGACTGAGAATGAACTCCGTATGCT
Found at i:16643342 original size:26 final size:26
Alignment explanation
Indices: 16643291--16643343 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16643281 CCGGTTCGAT
*
16643291 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16643317 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16643343 C
1 C
16643344 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16644053 original size:889 final size:888
Alignment explanation
Indices: 16639925--16646051 Score: 7688
Period size: 883 Copynumber: 7.0 Consensus size: 888
16639915 CATGTGCTGA
* * * *
16639925 CGCAACCCTCACTCCGATCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCC-ACCGATG
1 CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * * *
16639989 AAACGAGCGAGCGGACGGGCGGGCATTACACCGGCCAAAAAGGCGGGATGCGCAAGCCGTGGATC
66 AAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
*
16640054 AATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
131 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* *
16640119 CTTCTAAATTCATACAATGGTCCCTTAAGCCTTCATGTCAAGTTTCATGGCAAGACGACTCGTTT
196 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * *
16640184 TTTATTTTTCATGATTTTCGAAACTTTTTACGGTTCGGTATTTTTGAAAATTTTTTCAGAAGCAG
261 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGG-ATTTTTTAAAATTTTTTCAGAAGGAG
** * * *
16640249 TTTTGGCAACAAACTTAGTAGACGTGATCCTTCTATTTTT-TTGGGCATGCCCAAAAAAATTCAG
325 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAG
* * *
16640313 CTAAAATCTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTGCAA-ACACT
389 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT-TAAGACACT
* * * *
16640377 TTAAAGGCTATTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGAGGTGTGAGTTCTCGA
453 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
16640442 GATTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCACACATCATGTGC
518 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
* *
16640507 GCACACTCCCCGGCCCCCCCGATCATC-AAAGCCCCAATGCCGCCGATCAGGTTCTCCGACGATG
583 GCACACCCCCCGGCCCCCCCGATCGTCGAAA-CCCCAATGCC-CCGATCAGGTTCTCCGACGATG
* * ** * *
16640571 GTGTCCCGGCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACGC
646 GTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCC
* * *
16640636 TCGGTCTGG-TCTGATCTTAGATTAGGAATGAACTCCGTATGCTTAGACTGGG-ATGAACTCCGT
711 TCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * * * * * *
16640699 ACGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGCCAGCCAGAGGGGTGCGATGCGTA
775 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCA
* * * * * * *
16640764 AGCCAGGGATCGGTCGGGTCCTCATCTACGTGGTGTCGATCCTACTGC-
840 AGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCT
* * *
16640812 CGCAACCCTCAATCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCGTAAGCCAACCGACG
1 CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * *
16640877 AAACGAGCGCGCGAGCGGGCGGGCACTACGCCAGCCAGAGAGGCAGGATGCGCAAGCCGTAGATC
66 AAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* ****
16640942 GATAGGGTGGTAGGT-GGTTTAGGCACGTCTTCATATTTCTGTTGGGCCAATGCCATTTTTCTGG
131 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* *
16641006 CTTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTAT
196 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT-T
* * * *
16641071 TT-TATTTTTCACGATTTTTGAACCATTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGA
260 TTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TTCGGATTTTTTAAAATTTTTTCAGAAGGA
** * * *
16641135 GTTTTGG-CCCAAACTCAGTAGACATGATCCTTGTATTTTTGTTGGCTTGCACAAAACAATTCAG
324 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
** *
16641199 AGAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
389 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTT
** ** *
16641264 TAATGTATACTCACAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
454 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
16641329 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCATACATCATGTGTG
519 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCG
* * *
16641394 CACACCCCCCCGGCCCCCCTCGATCGTCGGAACCCCAATGCCGCCGGTCGGGTTCTCCGACGATG
584 CACA-CCCCCCGGCCCCCC-CGATCGTCGAAACCCCAATGCC-CCGATCAGGTTCTCCGACGATG
* * *
16641459 GTGTCCCGACGAAGACAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCA
646 GTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCC
* * * *
16641524 TCGGTTCGG-TCTGATCTGAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTTCGT
711 TCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * *
16641588 ATGCCTAAGTCAACCCAAGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCAGGATGCGAA
775 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCA
* * * * * * *
16641653 AGTCGGGGATC-GCTTGGGTCCCTCTTTGCGTGCTGCCAATCCTGC-GGT
840 AGCCGGGGATCGGC-CGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCT
* * *
16641701 CGCAACCCTCAGTCCGGTCTGATCTTCGACTGGGAATGAACTTCGTATGCCTAAGTCAACCGACG
1 CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * * *
16641766 AATCGAGCGGACGGAAC---C---C-CAATGCC-CCCA-A-A------ATGCGCAAGCCGTGGAT
66 AAACGAGCGGGCGG-GCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* * * * * *
16641815 CGATAGGTTGGTAGGTGGGTTTAGGCACATATTTATATTTTTGCCATGCAAATGCCTTTTTTCTG
130 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTG
* * *
16641880 GCTTGTAAATTTATACAATAGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATT
195 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * *
16641945 TTCTATTTTTCATGCTTTTTGAAACTTTTTACGGTTCGGGAGTTTTTAAAATTTTTCCAAAAGTA
260 TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCAGAAGGA
* * *
16642010 ATTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCATAAAAAAA---A-
324 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* *
16642071 CT------TGGAAGTGTACAGGATTTT-TGACCATTTGAAAAAAGTGTCCCCA-TTACAGACACT
389 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTA-AGACACT
* ** *
16642128 TTAATGTCTACTGGCAGCAAACCCATAAAATCTCAAATGCTTTTTAAGGGGGGTGTGAGTTCTCG
453 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCG
* **
16642193 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCACCCATTGCACATCATGTG
517 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTG
* ** * * *
16642258 TGCACACCCCCTCAAGGCCCCCCCGATCACCGAAACCCCAATACCCCCGATAAGTTTCTCCGACG
582 CGCACACCCCC-C--GGCCCCCCCGATCGTCGAAACCCCAAT-GCCCCGATCAGGTTCTCCGACG
** * * *
16642323 ATTATGTCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAACATGTGCTGTCGCAA
643 ATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAA
* ** * * * *
16642388 CCCTCGATCTTGTCCGATCATAGACTAGGAATGAACTCCGTATGCTTAGACTGAGAATGAACTCC
708 CCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
* * * ** *
16642453 GTATGCCTAAGTCAACCAATGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGGCGAAATACG
773 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCG
* * *
16642518 CAAGCCGGGGATCAGCCGGGTCCCCCTCTGA-GTGTTGTCGATCCTGCTGCT
838 CAAGCCGGGGATCGGCCGGGTCCCCCTCT-ACGTGCTGCCGATCCTGCTGCT
* * * * *
16642569 -GCAACCCACATTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGCCAACTGACG
1 CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * * * * **
16642633 AAACGAGCAGGTGGACGGGCGGGCACTACGCC-GCTAGATAGGCAGGATGCGCGAGCAATGGATC
66 AAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
*
16642697 GATAGGGTGGTAGGT-GGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGG
131 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* * * * * *
16642761 GTTGTAAATCCATACAACGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTAT
196 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
16642826 TCTATTTTTCATGACTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAG
261 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAAATTTTTTCAGAAGGAG
* ** *
16642891 -TTTCG-CCCAAACTCAGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
325 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* * *
16642954 TAAAAACTCCAAGTGTCCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
390 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTT
* **
16643019 AATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGG
455 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* **
16643084 TTTGATGAGGGATAGGGGGCCAATAAAAGGAACAAGTACCAGCACCCATCACACATCATGTGCGC
520 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGC
* * * *
16643149 ACACCCCCTGGCCCCCCCGATCGGCGAAACCCCAATGCCATCGATCAGGTTTTCCGACGATGGTG
585 ACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCC-CCGATCAGGTTCTCCGACGATGGTG
* ** * *
16643214 TCCCGAAGAAGAAAAATGTAGCACCAGCACATGCCCGAGCCCAGCATGTACTG-CTGTAGCCCTC
649 TCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC-GTAACCCTC
* *
16643278 GGTCCGGTTCGATCTTAGACTGGGAATGAACTTCATATGCTTAGACTGGGAATGAACTCCGTATG
713 GGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * *
16643343 CCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGTCAGCCAAAGGGGCGGGATGTGCAAGC
778 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGC
* * * * *
16643408 CGGGGATCGGCCGAGTCCCCCTCTACATGCTGCCGACCCTACTGTT
843 CGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCT
* ** ** * *
16643454 AG-AACCCTTGGTTGGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCATAAGCCAACTGACG
1 CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* ** ** *
16643518 AAACAAGCGGGCGGGCGGGCAAGCACTATACCGGCCAGAGAGGCGGGTTGCGCAAGCCGTGGATC
66 AAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* * * *
16643583 GATTGGGTGGTAGGTGGGTTTAGGTAGATCTTCATATTTCTGCCATGCCAATGCCATTTTTATGG
131 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* * *
16643648 CTTGTAAATTTATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTATAGCAAGACGACTCGTTT
196 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
16643713 TCTATTTTTCATAATTTTTGAAACTTTTTATGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAG
261 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCAGAAGGAG
* *
16643778 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTACTTTTGTTGGCATGCACAAAAAAATTCAAC
325 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
16643843 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTAAGACACTTT
390 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTT
* * *
16643908 AATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCAAGG
455 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * **
16643973 TTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGTACATCATGTGCGC
520 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGC
* * ** * * ** *
16644038 AAACCCCCCGGCCCCCCTCGATCGTCGGAACCCCAATTGTGCCGGTCAGGTTCACCGGTGATGAT
585 ACACCCCCCGGCCCCCC-CGATCGTCGAAACCCCAA-TGCCCCGATCAGGTTCTCCGACGATGGT
* * * *
16644103 GTCCCGACGAAGAAAAATACGGCA-CAGCACATGCTCGAGCCCAGCATGTGTTGTCGCAACCCTC
648 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTC
* * * *
16644167 AGT-CTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTAT
713 GGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
*
16644231 GCCTAAGTCAACCCACGAAACGA-------GG-G----GT-------------GGGATGCGTAAG
777 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * *
16644271 CTGGGGATCGACCGGGTCCCCCTCTGCATGCTACCAATCCTGCTGCT
842 CCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCT
* * * ** *
16644318 -GCAACCCTCAGTTCGGT-TCGATCTTAGACAGGGAATTAACTTTGTATGCCTCAGCCAACCGAC
1 CGCAACCCTCAGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * *
16644381 GAAACGAGCGGGCGGGCAGGCGGGCACTACACCGACCAGAGAGGCGGGATGCACAAGCCGTGGAT
65 GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
*
16644446 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTG
130 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTG
* *
16644511 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATTTGAAGTTTCATGGCAAGACGACTCATT
195 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * *
16644576 TTTTATTTTTCACT-ATTTTTGAAACTTTTTATGGTTCGGGATTTTTGAAAATTTTTTTAAAAGG
260 TTCTATTTTTCA-TGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCAGAAGG
* *
16644640 AGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTCTATTTTTGTTGGCATGCACAAAAAAATTCA
323 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* * * * *
16644705 GCTCAAAATTTGATGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCCCCATTTAAGACACT
388 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACT
* *
16644770 TTAATGGCTACTGGTAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
453 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
*
16644835 GGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
518 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
* ** * *
16644900 TCACA-CCCCCGAG-CCCCCCGATCGTCGAAACCCCAATGTCATCGGTCAGCTTCTCCGACGATG
583 GCACACCCCCCG-GCCCCCCCGATCGTCGAAACCCCAATG-CCCCGATCAGGTTCTCCGACGATG
* * * * *
16644963 GTGTCTCGACTAAGAAAAATACGGCACCAGCACATTCCCAAGCCCAGCATGTGCTGTCGTAACCC
646 GTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCC
* **** *
16645028 TCTGTGTAATTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTA
711 TCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * *
16645093 TG-CTAAGTCAACCAACGAAACGAGCTTGCGGGCGCTCAGTCGGCCAGA---G-GGGATGCCCAT
776 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * *
16645153 GCTGGGGATCAGTCGGGTCCCCCTCTGCGTGTTGTCGATTCTGTTGC-
841 GCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCT
* * * ** * * *
16645200 CGTAACACCT-GGTCCAGTCCAATCTTAGACTTGGAATGAACTCCGTATGCCTAATCGAACCGAC
1 CGCAAC-CCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * ** * *
16645264 GAAACGAGCGGGCAGGCGGGCAGGCACTTCGCCGGCCAGAGAGGTTGGATGTGCAAGCCATGGAT
65 GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* *
16645329 CGATAGGGTGTTAGGTGGGTTTAGGCACATCTTCATATTTCTGTCATGCCAATGCCATTTTT-TG
130 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCT-
* *
16645393 GGATTGTAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
194 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
* * *
16645458 TTTTTATTTTTCATGATTTTTAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCAGAAGG
259 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAAATTTTTTCAGAAGG
*
16645523 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCA
323 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* * *
16645588 GCCAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
388 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACT
* * * *
16645653 TTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTCAGTTCTCAA
453 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* ** *
16645718 GGTTTGATGAGGGATAAGGGGTGAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
518 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
* *
16645783 GCCCACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCC-AGTCAGGTTCAT-CGACGAT
583 GCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCC-CCGA-TCAGGTTC-TCCGACGAT
* * * * * * *
16645845 GGTGT-CCGAGCGAATAAAAATGCGGCACCAGCACATTCCCGAGCCCAGTATCTCCTGCCATAAC
645 GGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAAC
* * * *
16645909 CCTCGGTCCGATCCGATCTTAAACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCG
709 CCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * ** *
16645974 TATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAACCGGCCAAAGGGGCGGGATGCGC
774 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGC
16646039 AAGCCGGGGATCG
839 AAGCCGGGGATCG
16646052 ATAGGGTGGT
Statistics
Matches: 4517, Mismatches: 612, Indels: 221
0.84 0.11 0.04
Matches are distributed among these distances:
861 2 0.00
862 77 0.02
863 103 0.02
864 581 0.13
865 78 0.02
866 104 0.02
867 298 0.07
868 15 0.00
869 3 0.00
870 1 0.00
872 1 0.00
873 8 0.00
874 39 0.01
875 154 0.03
876 45 0.01
877 2 0.00
878 47 0.01
879 5 0.00
880 155 0.03
881 32 0.01
882 14 0.00
883 715 0.16
884 54 0.01
885 325 0.07
886 263 0.06
887 390 0.09
888 350 0.08
889 597 0.13
890 57 0.01
891 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
CGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
AAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGATTTTTTAAAATTTTTTCAGAAGGAGT
TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCA
CACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCCCGATCAGGTTCTCCGACGATGGTGTC
CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGT
CCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGG
GGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCT
Found at i:16644218 original size:26 final size:26
Alignment explanation
Indices: 16644180--16644232 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16644170 CTGATCTGAT
*
16644180 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16644206 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16644232 C
1 C
16644233 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16645079 original size:26 final size:26
Alignment explanation
Indices: 16645043--16645096 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
16645033 GTAATTCGAT
16645043 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16645069 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16645095 CT
1 CT
16645097 AAGTCAACCA
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16645962 original size:26 final size:26
Alignment explanation
Indices: 16645926--16645978 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16645916 CCGATCCGAT
16645926 CTTAAACTGGGAATGAACTCCATATG
1 CTTAAACTGGGAATGAACTCCATATG
* *
16645952 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCATATG
16645978 C
1 C
16645979 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCATATG
Found at i:16647552 original size:26 final size:26
Alignment explanation
Indices: 16647512--16647564 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16647502 CCAGTCTGAT
16647512 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
16647538 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
16647564 C
1 C
16647565 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:16649287 original size:26 final size:26
Alignment explanation
Indices: 16649258--16649310 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16649248 CCGATCCAAT
16649258 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16649284 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16649310 C
1 C
16649311 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16649658 original size:881 final size:882
Alignment explanation
Indices: 16646649--16660833 Score: 17787
Period size: 889 Copynumber: 16.1 Consensus size: 882
16646639 CCGGTCCGAT
* * * * * *
16646649 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACAAGCATGCGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16646714 CGGCCAGAGGGGAGAGATGCGCAAGCCGGAGATCAG-CTGGGTCCCCCTCTGCGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATC
* ** *
16646778 CTGCTGCTGCAACCCTCGGTCCAATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * * **
16646843 ACTGACGAAACGAGCGGGCGGGTTGGCAGGCACTAAGTCGGCCAGAGAGGCAAGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
** * *
16646908 GTGGATTAATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATACCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * *
16646973 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTGATGTGAAGTTTCATGGCAAGATGT
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
16647038 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * ** * ** * *
16647103 GAAAGTGTTTTTCCCCCAAATTTGGTAGACCCGAGCCTTGCATTTTTGTTGGCATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
16647168 ATTCAGCTAAAAAATCAAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16647233 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16647298 CTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAGGTACCAGCACCCATCGCACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
16647363 TGTGCGCACACCCCCCGGCCCCTCCGATCGTCGGAACCCCAATGTCACTGGTCAGGTTCTTCGGC
715 TGTGCGCACA----CC--CCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * *
16647428 GATGGTGTCCCGACGAAGAAAAATGCGGTACCTGCACATGCCCGAGCCCAGCATGTGCTGTCGCA
773 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * *
16647493 AACCTCGGTCCAGTCTGATCTTAGACTGGAAATGAACTCCGTATG
838 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16647538 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAATGAAACGAACGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16647603 CAGCCAGAGGGGCGGGATGCACAAGCTGGGGATCGGTTGGGTCCCTCTCTGTGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
16647668 TGCTGCCGCAACCCTCGGTCTGGT-TCGATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * ** * *
16647732 ACCGATGAAACGAGCGTGCGAACGGGCGGGCACTACGCCGACCAGAGAGGCGGGATGCGCAAGTC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * * * **
16647797 GTGGATCGATAGGGTGGTAGGTGGGTTTTGACACATTTTCAAATTTCTGCCATCCCGCTGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
16647862 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
16647927 CTTGTTTTCTATTTTTCATGATTTTCGAAACTTTTTACGGCTCGAGATTTTTTAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * * *
16647992 GAATGAGTTTTGGCCGCAAACTTGGTAGACGTGATCCTTCTATTTTTGTTGGCATGCACAAAACA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16648057 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
16648122 ACACTTTAATGGCTACTGACAGCAAACCTATAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * ** *** *
16648187 CTCCAGGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCTGGTACCAATGCCCATCACACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
16648252 TGTGAGCACACCCTCCCCAGCTCCCCTGATCGCCGGAACCCCAATGCCGCCAGTTAGGTTCTCCG
715 TGTGCGCACA-----CCC--C-CCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* ** * * *
16648317 GCGATGGTGTCTCGGTGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCTG
771 GCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
16648382 CAA-CC-C--T-C--T--G--C---G--T-GG--T---CT--G-AT-
836 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16648403 CTTAGACTGAGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16648468 TGGCCAGAGGGGCGGGATGCGCAAGCCTGGGATCGGTTGGGTCCCCCTCTGCATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
16648533 TTCTGCTGTAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAAC-CCTGTTTGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC-GTATGCCTAAGCCA
** * ** * *
16648597 ACAAATGAAACGAGCGGATGGGCGGGCGGGCACTATGCCGGCCAGAGAGGCAGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
*
16648662 GTGGATCGATAGGGTGGTAGGTGGGTTTACGCACATCTTCATATTTCTGCCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
16648727 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* ** *
16648792 CTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTGTTTAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * *
16648857 AAAGGAGTTTTGGGCCCAAACTTGGTAGACGTGACCCTTGTATTTTTGTTGGCATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
16648922 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCTG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16648987 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * ** * *
16649052 CTCGAGGTTTGATAAGGGATAGAGGGCCAATATAAGGGCCAAGTATAAGCACCCATCGTACATCC
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * *
16649117 TATGCGTACA-CCCCCCCGATCGTCGGAACCCCAATGTCGCCGTTCTGGTTCTCTGACGATGGTG
715 TGTGCGCACACCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTG
* *
16649181 TCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCA
780 TCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
* *
16649246 GTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATG
845 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
16649284 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCTACGAAATGAACATGTGGGCGCTAAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * **
16649349 TGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCAAGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
16649414 TGTTGCCGTAACCCTCAGTCCAGTCTGATCTTAGACTGGGAAAGAACTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * * *
16649479 TCGACAAAACGAGCGGGCGGATGGGTGGGCACTACGTCGGCCAGAGAAGCGGGATGCGCAAGTCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
16649544 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16649609 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGACAAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
** * * * *
16649674 TCGTTCCCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTGAAAATTTTTTCAA
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * * *
16649739 AAGGAGTTTTGGCCCAAAACTTGGTAGACATGATCCTTGTATTTTTATTGGCATGCATAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * * * *
16649804 TTCAGCTAAAAATTGGAAGTGTACAAGATTTTGTGATCGTTTGAAAAAAATGTCCCCATTTAAGA
521 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
16649869 CACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
586 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16649934 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCCCACATCAT
651 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
16649999 GTGCGCACAAATCCCCCCGGTCCCCCCCATCGTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCG
716 GTGCGCAC--A-----CC---CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
** * ** *
16650064 GCGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCACATGGTCGAGCCCAACATGTGCTGCCG
771 GCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * * ** *
16650129 TAACCCTTGTTCTGATCCGATCTTATTCTAGG---GAACTCCGTATG
836 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16650173 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCCACCCACAAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16650238 CGGGCAGAGGGGCGGGATACGCAAGCCGGGGATCAGTCGGGTCCCCCTCTGTGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * *
16650303 TACTGCCGCAGCCTTCGGTTCGGTCCGATCTTAGACTGGGAATGCACTCCGTATCCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
16650368 CCGACG-AA--A-----CGGGCGGGCGGGCACTATGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
16650425 TGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCCT-CCATGCCAATGCCATT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-CTGCCATGCCAATGCCATT
* *
16650489 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGGCCA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * *
16650554 CTCGTTTTCTATATTTCAAGATTTTCGAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTC
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTC
** * *
16650618 AGAAAAAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCATGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
16650683 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTA
519 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
16650748 GACACTTTAATGGCTACAGGCAGCAAACTTGTAAAATCTCAAATGTTCTTTAAGGGGGTGTGAGT
584 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * ** *
16650813 TCTCGGGGTTTGATGAGGGATAGGGGTCCAATATAAGGGCCAAGTATAAGCACCCATTGCACATC
649 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *
16650878 ATGTGCG-A-A-CACCCCC---C-T-GG--CCCC----CC-CC-G--A---TC-GCGGCGATGGT
714 ATGTGCGCACACCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGT
*
16650921 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTTC
779 GTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
*
16650986 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
844 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
16651025 CTTAGACTGGGAATGAACTCTGTATGCCTAACTCAACCCATGAAACGAGCATACGGGCGTTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16651090 CGGCCAGCGGGGTGGGATGCACAAGCTGGGGATCGATCAGGTCCCCCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * ** * **
16651155 TACTACTACAACCCTCAGTTTGG-CTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGGTC-TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** * * * *
16651219 ACCGACGAAACGAACGGGCGGGTAGGCGGGGACTACGCTGGCCAGAGAGGCGGGATGCTCAAGTC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
16651284 GTGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTGTCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA-T
* * * *
16651349 TTTTTTGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGATGTTTCATGGCAAGATG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
** *
16651414 ACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTC
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
*
16651479 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCA-AAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
16651543 TAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAGCATTCGAAAAAAGTGTCCCCATTTC
519 -AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
16651608 AGACACTTTAACGACTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
583 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * * **
16651673 TTGTCAAGGTTTGATGAGGGATA-GGGG-CAATATAAGAGCCATGTACTGGCACCCATCGCACAT
648 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
16651736 CATGTGCGCACACCCCCCCGACCCCGCCCGATCATCGGAACCCCAATACCGTCGGTCAGGTTCTC
713 CATGTGCGCACA------C--CCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC
** * *
16651801 CGGCGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGT
769 CGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * *
16651866 CGCAACCCTCGATCCGATCCAATCATAGACTGGGAATGAACTCCGTATG
834 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16651915 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACTCACGAAACAAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** *
16651980 CAGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGATCGGGTCCCCCTCTATGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
16652045 TGCTGCCGCAACCCTCAGTTCGATCTGATTTTAGACTTGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
16652110 CCGTCGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGACCAGATAGGCGGGATGCGCAAGTCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
16652175 TGGATTGATAGGGTGGTAGGTGGGTTAAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
16652240 TTTTGGCATGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTGATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
16652305 TCGTTTTCTGTGTTTCACGATTTTTGAAACTTTTTACGGTCCGAGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
*
16652370 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGGATGGC-CAAAAAC
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT-GCACAAAAA-
* * * *
16652434 AA-TCTGCT-AAAACTCG-ATTGTACAAGAATTTGTGACCATTTCAAAAAAGTGGTCCCCATTAT
519 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT-GTCCCCATT-T
*
16652496 -AGACACTTTAAATGGCTACTGGCAGCAAACCATGTAAAATCTCAAATGCTTTTTAAGGGGGTGT
582 CAGACACTTT-AATGGCTACTGGCAGCAAACC-TGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
16652560 GGAGTTTTTGAGGTTTGAATGAGGGAATAGGGGGCCAATATTAAGGGCCAAGTAACAGGCACCCC
645 -GAGTTCTCGAGGTTTG-ATGAGGG-ATAGGGGGCCAATA-TAAGGGCCAAGTACCA-GCA-CCC
* * *
16652625 ATCGCACATCATGTGCGGCACACCCCCCAGCCCCACCCGATCGTCGGAACCACAATGTCGTCGGT
704 ATCGCACATCATGTGC-GCACA-----C--CCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGT
* * * *
16652690 CAGGTTCTTCGACGATGGTGTCTCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGC
760 CAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * *
16652755 ATGTGCTACCGCAACCTTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATG
825 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16652813 TTTTGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTAAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16652878 CGGCCAGAGGGGCTGGATGTGGAAGCCAGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * ** * *
16652943 TGCTGCCACAACATTTGGTTTGGTCTAATCTTGGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
16653008 CCGAAGAAATGAGTGAGCGGGCGGGAGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * * **
16653073 TGGATTGATAGGGTGGTAGGTGGGTTTAGGCACACCCTCATATTTCTGCTGTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * * *
16653138 TTTTGGCATGTAAATTCATACAATGGTCGCTTAAGCCTTCATGTGAAGTTTTATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
16653203 TCGTTTTCTATTTTTTACGATTTTTAAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTCA
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCA
* ** * * * * *
16653267 GAAGAAGTTTTGGTACCAAACATGGTGGACGTGGTCCTTATACTTTTT-TTGGCTTGCACAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAA
* * *
16653331 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGCCCATTTGAAAAAAGTGTCCCCATTCCA
519 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
16653396 GACATTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGTGT
584 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
16653461 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACATC
649 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
****
16653526 ATGTGCGCACACCCCCCCCACCCCCCTCGATCGTCGGAACCCCAATGTTATCGGTCAGGTTCT-C
714 ATGTGCGCACA-------C-CCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * *
16653590 --C------G----G-CGAAGAAAAATGCAGCACCAGCACATGCCCTAGCCCAGCATGTGCTGTC
770 GGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * *
16653642 GCAACCCTCGGTCTGGTCCGATCTTAGACTTGGAATGAACTCCTTATG
835 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16653690 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTACGGCCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * *
16653755 CGACCAGAGGGGCAAGATGCGCAAGCCGGGGATTGATCGGGTCCCCCTTTGTGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
16653820 TGCTGCTGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTTCATATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
16653885 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACTCCGACCAGAGAGGCGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
16653950 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
16654015 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * ** * * *
16654080 TCGTTTTCTATTTTTCACAATTCTCAAAACTTTTTACTGTTTGGGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* **
16654145 AAGGAGTTTTGGCCCTAAACTTTCTTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
456 AAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
16654210 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16654275 ACACTTTAATCGCTACTGGCAGCAAACATGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
16654339 C-CTGAGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTACCAGCACCCATCGCACATC
650 CTC-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
16654403 AT-TGCCGCACACCCCCCCGATCCCCCCATCGCCGGAACCCCTATGCCACCGGTCAGGTTCTCTG
714 ATGTG-CGCACA----CCC---CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * * * *
16654467 GCAATGGTGTCCCAACG-AGAAAAAATGTGGCACCAGCATATGCCCGAACCCAGTATGTGCTGTC
771 GCGATGGTGTCCCGACGAAG-AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
*
16654531 GTAACCCT---T---G---G----T---CT-GG--T---CT--G-AT-
835 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16654553 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16654618 CGGCCAGAGTGGTGGGATGCGCAAGCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
16654683 TCCTGCTGCAACCCTCGGTCTGGT-TCGATCTTAGACAGGGAATGAACTTCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * ** * *
16654747 AGCGATGAAACGAGTGGGCCGGCGGGATGACACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
16654812 ATGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * *
16654877 TTTCTAGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGCCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * * *
16654942 CTCGTTTTCTATTTTTCTCAATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATCTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* ** * *
16655007 GAAGGAGCTTCAGCCCCAAAGTTGGTACACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
16655072 ATTCAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16655137 ACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * * * *
16655202 CTTGAGATTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGAACCAGCACCCATCGCACATCT
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * **
16655267 TGTGTGCACACCCCCCCGGCCCCCCCCGATCGTCGGAACCGCAGTGCCATCCGGTCAATTTCTCC
715 TGTGCGCACA---------CCCCCCCCGATCGTCGGAACCCCAATGCC-GCCGGTCAGGTTCTCC
* * * * * *
16655332 GACGATGGTGTCCTGGCGAAGAAAAATGTGGTACCAGCACATGCCCGAGCCCAGCATCTG-TAGC
770 GGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GC
* * *
16655396 CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
834 CGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16655445 CTTAGATTGGGAATGAACGT-CGTATGCCTAAGTCAACCCACTAAAGGAACGTGCAGGCGCTCAG
1 CTTAGACTGGGAATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * *
16655509 CTGGCCAGAGGGGCAGGATGCACAAGCCGGGGATC-GACTGGTTCCCCCTCTGCGTGCTACTGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGAT
* * * * *
16655573 CCTGCTGCCGTAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCC
129 CCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
16655638 AACCGACGAAACGA----GCGGGTGGGCGGGCACTACGCCGACCAGAGAGGCGGGATACGCAAGC
194 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
**
16655699 CGTGGATCGATAGGGTGGTAGGTAAGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* *
16655764 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTGAAGCCTTCATGTGAAGTTTCATGGCAAGACA
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * *
16655829 ACTCGTTTTCTCTTTTTCACGATTTTTGAAACTTTTTACGGTTCGATATTTTTTAATATTTTTTC
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
*
16655894 AGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
16655959 AATTCAGCTAAAAACTCGAGGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCA
519 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16656024 GACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
584 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
16656089 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATC
649 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
16656154 TTGTGCACCTGC-CCCCCTGCCGCCCGATCGTCGGAACCCTAATACCGTCGGTCAGGTTCTCCGG
714 ATGTG---C-GCACACCC--CC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * *
16656218 TGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATTCCCGAG-CCATGCATGTGCTGCCA
772 CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA-GCATGTGCTGCCG
* *
16656282 CAACCCTCGGTCCGGTCCGATCATAGATTGGGAATGAACTCCGTATG
836 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16656329 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGGAACGAGCGTGCAGGCGCACAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
16656394 CTGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
16656459 TACTGCCACAACCCTCAGTCCAGTCCGATCTTAGACTGGGAATGAACTACGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
16656524 CCGACGAAACGAGCGGGCGGAC-GGCAGGCACTACGCCGGCTAGAGAGGCGAGTTGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
16656588 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCCCTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * * *
16656653 TTCTGGCTGGTAAATTCATACAATGGTCCCATATGCCTTCATGTGAAGTTTGATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * * * *
16656718 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACTGTTCGAAATTTTTTAAAATTTTTTTAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * * * * *
16656783 AGGGATTTTTGTCCCCAAAGTTGGTAGACGTGGTCCTTGTATTTTTTTTGGCATGCACAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * **
16656848 TTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTATCCAAATTTCAGA
521 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16656913 CACTTTAATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
586 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16656978 TCGAGGTTTGATGAGGGATAGAGGGCCAAGATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
651 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
16657043 GTGCGCACACCCCCCGGCCCCTCCGATCATCGAAACCCCAATGCCACCGGTCAGGTTCTCCGACG
716 GTGCGCACA----CC--CCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * * ***
16657108 ATGGTGTCCC-AGTGAACAAAAATGCAGCACCAGCACATGCTCGAGGATAGCATGTGCTGCCGCA
774 ATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * * * *
16657172 ATCCTCAGTTCGGTCTGATCTTAGACTGGGAAAGAACTTCGTATG
838 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16657217 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAACGTGCCGGG-GATCGA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG-CGGGCGCTC-A
* * ******* * ** * * ** *
16657281 TCGGGTCC-GTCTTTATGTATGC-TTAGACTGGGAATGAACTCCGTATGCCTAAGTCCCTCTCTG
64 GCCGG-CCAGAGGGGCGGGATGCGCAAG-CCGGG---G-A-T-CG---GTC-GGGTCCCCCTCTG
* * * * *
16657344 TGTGCTGCCGATCCTACTGCTGCAACCCTCGGTCCGGTCCGATATTAGACTGGGAATGAACTCCG
117 CGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * *
16657409 TATGCCTAAGCCAACCGACGAAACGAGCGGGTGGACGGGTGGGCACTACGCCGGCCAGAGAGGCG
182 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCG
* * * *
16657474 GGATGCGCAAGTCATGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCA
247 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCA
*
16657539 TGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
312 TGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
* * * *
16657604 CATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGGGATTTTT
377 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTT
** * *
16657669 TCGAATTTTTTCAGAAGGAGTTTTGGCCTCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGG
442 TAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * * *
16657734 CATGCATAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCTTTTAAAAAAAGT
507 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
16657799 GTTCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAA
572 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* ** * * *
16657864 GGGGGTGTGAGTTCTC-AAG--T-ACCA--G-CA-----CC--CAT------C--GTA-CATCA-
637 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
** * * * * * *
16657905 -TGT-GCGCA-CA-G-CCCCCCAGCCCCCCCTCGATCGTCGGAACCCCAATGCCACCAGTCAGGT
702 CCATCGCACATCATGTGCGCACA-CCCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* ** * * *
16657965 TCTCCGGCGATGGTGTCTCGACGAAGAAAAATATGGCACCAGCACATCCCCAAGCCCAGAATGTG
765 TCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * *
16658030 CTACCCCAACCCTCGGTCCGGTCCGATCATAGACTGGGAATTAAGTCCGTATG
830 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
16658083 CTTAGATTGGGAATGAACTCCGTGTGCCTAAGTCAACCCATGAAATGAGCGTGTGAGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16658148 CGGCCAGAGGGGCGGGATCCGCAAGCCAGAGATCGGCCGGGTCCCCCTCTGTGTGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * *
16658213 TGCTGTTGTAACCCTCGGTTCGATCCGATCTTACACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
16658278 CCGATGAAACGAGCGGGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
*
16658343 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTGCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16658408 TTTTGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* *
16658473 TCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTC--
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * *
16658536 -AGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCAAAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAA
* * * *
16658600 ATTCAG-TAAAAAACTGGAAGTGTGCAAGATTTTGTGACCATTTG-AAAAAGTGTCCCTATTTAA
520 ATTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
16658663 GACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGTTCTTTAAGGGGGGGTGAGT
584 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
16658728 TCTCGAGGTTTGATAAGAGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
649 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ***
16658793 ATGTGTGCACACCCCCCAGCCCCCCCGAATCGTCGGAACCCCAATGCCATTGGTCAGG-T-T---
714 ATGTGCGCACA-----C--CCCCCCCG-ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
16658853 -C-----T-T--CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
771 GCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
16658909 CAACTCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
836 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16658956 CTTAGACTGGGAATGAACTCCGTATACCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** * * * *
16659021 CGGTCAGAGGGGTGAGATGCGTAAGCTGGGGATCGACCGGGTCCCCTTCTACATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
16659086 TGCTGCCACAACTCTCGATCCGATCCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGGTCCGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
16659150 ACCGACGAAACGAACGGGCGGGCAGGCGGGCACTACGCCGACTAGAGAGGCGGGATGCGCAAGCC
195 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* *
16659215 GTGGATCGATAGGGTGGTAGG-GGGCTTAGACACATCTTCATATTTCTGCCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * *
16659279 TTTCTGGCTTGAAAATTCATACAATGGCCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* ** * *
16659344 CTCGTTTTCTATTTTTTACGATTTTCAAAACTTTTTAGGGTTCGAGACTTTTTAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCA
* * * *
16659409 GAAGGACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGAAGAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
16659474 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
16659539 ACACTTTAATGGCTACTGGCTGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
16659604 CTCGAGGTTTGATGAGGGATAGGGGGCTAAGATAAGGGCCAAGTACCAGCACCCACCGCACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * ** * * *
16659669 TATGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCTAGTTAGGTTCACTGGC
715 TGTGCGCACA-----C--CCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * * ** * **
16659734 GATGATGTCCCAACGAAGAAAAATACGTCACCAGCACACACTCGAGCGTAGCATGTGCTGCCGCA
773 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* **
16659799 ACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCTATATG
838 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
16659844 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAGGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16659909 CGACCAGAGGGGTGGGATGCGTAAGCCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * * *
16659974 TGCTGCTGCAACCTTCAGTCCTGTCCGATCTTCGACTCGGAATGAACTCCGTATGCCTAACCCAA
131 TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
16660039 CCAATGAAACGAGCGAGCGGGCGGGCTGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
16660104 TGCATCGATAGGGTGGTAGGTGGGCTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* *
16660169 TTCTGGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAGGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
*
16660234 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
* * * *
16660299 AAGGATTTTTCGCCCCAAACTTAGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
16660364 TTCAACTAAAAACTCGAAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
521 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
**
16660429 CACTTTAATGGCTACTGGCAGCAAACCCATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
586 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16660494 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCGTACATCAT
651 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA-
* * *
16660559 GTGTGCACACCACTCCGGCCCCCCCGATCATCGGAACCCCAATACCGCCGGTCAGGTTCTCCGGC
715 -TGTGCGCA-CA---C--CCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* ** * * * *
16660624 GATGATGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGTCGTA
773 GATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
*
16660689 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATG
838 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16660734 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGACACGAGCGTTCGAGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
*
16660799 CGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCG
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
16660834 CCTGGGCCTG
Statistics
Matches: 11577, Mismatches: 1425, Indels: 587
0.85 0.10 0.04
Matches are distributed among these distances:
849 85 0.01
850 2 0.00
851 1 0.00
852 315 0.03
853 50 0.00
855 412 0.04
856 13 0.00
857 4 0.00
858 1 0.00
859 46 0.00
860 108 0.01
861 319 0.03
862 158 0.01
863 502 0.04
864 10 0.00
865 675 0.06
866 252 0.02
867 6 0.00
868 12 0.00
869 4 0.00
870 4 0.00
871 9 0.00
872 168 0.01
873 329 0.03
874 88 0.01
875 253 0.02
876 10 0.00
877 596 0.05
878 154 0.01
879 4 0.00
880 8 0.00
881 1105 0.10
882 12 0.00
883 11 0.00
884 292 0.03
885 27 0.00
886 10 0.00
887 525 0.05
888 1019 0.09
889 1487 0.13
890 679 0.06
891 173 0.01
892 315 0.03
893 20 0.00
894 20 0.00
895 14 0.00
896 27 0.00
897 40 0.00
898 645 0.06
899 138 0.01
900 420 0.04
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (882 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGT
CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16651028 original size:26 final size:26
Alignment explanation
Indices: 16650999--16651051 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16650989 CCGATCCGAT
16650999 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16651025 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16651051 C
1 C
16651052 CTAACTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16651920 original size:26 final size:26
Alignment explanation
Indices: 16651891--16651941 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16651881 GATCCAATCA
16651891 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
16651917 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
16651942 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:16653702 original size:26 final size:26
Alignment explanation
Indices: 16653664--16653716 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16653654 CTGGTCCGAT
* *
16653664 CTTAGACTTGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCATATG
16653690 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16653716 C
1 C
16653717 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16655448 original size:26 final size:26
Alignment explanation
Indices: 16655419--16655471 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16655409 CTGGTCTGAT
16655419 CTTAGACTGGGAATGAAC-TCTGTATG
1 CTTAGACTGGGAATGAACGTC-GTATG
*
16655445 CTTAGATTGGGAATGAACGTCGTATG
1 CTTAGACTGGGAATGAACGTCGTATG
16655471 C
1 C
16655472 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.26, C:0.15, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACGTCGTATG
Found at i:16656334 original size:26 final size:26
Alignment explanation
Indices: 16656305--16656355 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16656295 GGTCCGATCA
* *
16656305 TAGATTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCATATGCT
16656331 TAGACTGGGAATGAACTCCATATGC
1 TAGACTGGGAATGAACTCCATATGC
16656356 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCATATGCT
Found at i:16657220 original size:26 final size:26
Alignment explanation
Indices: 16657191--16657243 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16657181 TCGGTCTGAT
*
16657191 CTTAGACTGGGAAAGAACTTCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
*
16657217 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAAAGAACTCCGTATG
16657243 C
1 C
16657244 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCGTATG
Found at i:16658959 original size:26 final size:26
Alignment explanation
Indices: 16658930--16658980 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
16658920 CCGGTCTGAT
*
16658930 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16658956 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16658981 ACCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16659869 original size:26 final size:26
Alignment explanation
Indices: 16659818--16659870 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16659808 CCGGTCCGAT
*
16659818 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16659844 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16659870 C
1 C
16659871 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16660744 original size:26 final size:26
Alignment explanation
Indices: 16660708--16660760 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16660698 CCGGTCCGAT
*
16660708 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16660734 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16660760 C
1 C
16660761 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16662102 original size:861 final size:862
Alignment explanation
Indices: 16660843--16664243 Score: 4407
Period size: 889 Copynumber: 3.9 Consensus size: 862
16660833 GCCTGGGCCT
* * * * *
16660843 GATCTTAGACTGGGAAGGAACTCTGTATCCCTAAGCCAATCGATGAAACGAGCGGACGAGCGGGC
1 GATCTTAGACTGGGAAGGAACTC-GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC
* * *
16660908 AGTTCACTACGCCGGCCCGAGAGGCAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
65 AG-GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
16660973 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
129 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
* * *
16661038 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCATTTT-TATTTTTCACCATTTTT
194 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
*
16661102 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGT
259 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTAGT
* * * * *
16661167 AGATGTCATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAAATTGAAGTCTACA
324 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACA
* *
16661232 AGATTTTGTGACCATTTGAAAAAAGTGTGCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
** *
16661297 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGTGATAGGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
* *
16661362 CCAACATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCTCG
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* * * ** * **
16661426 ATCGTCGGAACCCTAATGCTGTCGGTCAGGTTCTCCGGTGATGGTGTCCCGGTGAAGAAAAATGT
584 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATAC
16661491 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAATCC-TCGGTCTGATCCGATCTTAGA
649 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAATCCATCGGTCTGATCCGATCTTAGA
* * * **
16661555 CTGGGAATGAACTTCGAATGCCTAAGTCAACCCACAAAACGACCGTGCGGGCACTCAGCCATCCA
714 CTGGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCA
* * * * * *
16661620 GAGGGGCGAGATGCGCAAGCCTGGGATCGATCTGGTCCTCCTCTGCGTGCTGTTGATCCTGCTGC
779 GAGGGGCGGGATGCGCAAGTC-GGGATCGATCCGGTCC-CCTCTGTGTGCTGTCGATCCTGCTAC
*
16661685 CGCAACCCTCGGTCT-GATCC
842 CGCAACCCTCGGTCTCGGTCC
* * * * *
16661705 AATCTTAGACTGGGAAAGAACTCATATGCCTAAGCCAACCGATGAAACGGGCGGGCGGGCGGGCA
1 GATCTTAGACTGGGAAGGAACTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCA
*
16661770 GGCACTACGCCGGCCAGAGAGGTGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
66 GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
** * * * * *
16661835 AGGTGCATCTTCATATTTTTGCTATGCCAATGCCATTTTTCTAGCTTGTACATTCATATAATGGT
131 AGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGT
* * *
16661900 CCCTTAAGCCTTCATGTGAAGTTTCATTGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTAA
196 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
** * *
16661965 AACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAATTTGGTAG
261 AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTAGTAG
* * *
16662030 ACGTGATCCTTGCATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAAATCTAAGTGTACAAG
326 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAG
* *
16662095 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACATTAATGGATACTGGCAGCAAACC
391 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* **
16662160 TCTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGAT
456 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCC
* *
16662225 AATATAAGGGCCAAGTACCAGCACCAATCGCACATCTTGTGCGCACACCCCCCGGCCCCCCCGAT
521 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
* *
16662290 CGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGT-CCTGCGAAGAAAAATACGG
586 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGG
* * * *
16662354 CACCATCACTTGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGATCCAGTCTGATCTTAGACTG
651 CACCAGCACATGCCCGAGCCCAGCATGTGCT------ACCGT-AATCCA-TC-G------G--T-
* *
16662419 AAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
698 ---CTG-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAACGA
* * * *
16662484 GCGAGCGGTCACTCAGTCGGCCAGAGGGGCGGGATGCGCAAGTCGGCGATCGA-CCGAATTCCCC
756 GCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGG-GATCGATCCG--GTCCCC
* * *
16662548 TCTGTGTGTTGTCGATCCTGCTACCGCAACCCTCAGT-TCGGTCT
818 TCTGTGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCTCGGTCC
* * *
16662592 GATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCGGGC
1 GATCTTAGACTGGGAAGGAAC-TCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC
* * * * *
16662657 GGGCAGTACGCCGGCCAGAAAGGCGGGATGCGCAAGCCATGAATCGATAGGGTGGTAGGTGGGTT
65 AGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
*
16662722 TAGGCATATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGG
130 TAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGG
* *
16662787 TCCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATATTTG
195 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * *
16662852 AAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCCAAGCTTAGTA
260 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTAGTA
* * * * * * * *
16662917 GACTTTATCCTTATATTTTTGTTGGCTTGCACAAAAACATTCATCTAAAAACTCGAAGTGTGCAA
325 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAA
* * *
16662982 GATTTTGTGACCATTTGAAAAAGGTGTCCACATTCCAGACACTTTAATGGCTACTGGCAGCAAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * *
16663047 TTGTAAAATCTCAAATGCTCTTTAAGGCGGTGTGAGTTGTCAAGGTTTGATTAGGGATAGGGGGC
455 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
* * *
16663112 CAATATAAGGGCCAAGCACCAGCACCCATCGCACATCATGTGTGCACACCCCCTGGCCCCCCCGA
520 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGA
* * * ** *
16663177 TCGTCGGAACCCCAATACCGCCGGTTAGGTTCTCCGACGATGATGTCCAAGTGAAGAAAAATACG
585 TCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACG
*
16663242 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCTTCAGTCTGATCCGATCTTAGACT
650 GCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAA---TC---C--AT-CG------G--T
* * * *
16663307 GGGAATGGACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACG
698 ----CT-GA-TCCG-AT-CTTAGACTGGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAACG
* * * * ** *
16663372 AGCGTGTGGGCGCTCAACCGGCCAGAGGGGTGGGATTTGCAAGTCGGGGATC-AGTCGGGTCCCC
755 AGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGATCGA-TCCGGT-CCC
* * * * *
16663436 CTCTGTGTGCTGCCGATCCTGCTACTGCAATCCTTGGTCTGGGT-C
817 CTCTGTGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCTCGGTCC
* * * *
16663481 GATCATAGATTGGGAAGGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGTGC
1 GATCTTAGACTGGGAAGGAACT-CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC
* * *
16663546 GGGCACTACGTCGGCCCA-AGAGGCGGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGGGT
65 AGGCACTACGCCGG-CCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16663610 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCTTCTAAAATCATACAATG
129 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
* *
16663675 GTTCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
194 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* *
16663740 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACCTATT
259 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTAGT
* * * * * *
16663805 AGACATGATCGTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTGGAAGTGTATA
324 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACA
*
16663870 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
16663935 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATATGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
** * *
16664000 TAAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACA-CCCTCGG-CCCCCCG
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* * * * * ** *
16664063 ATCGTTGGAACCCCAATGCCGTCGATCTGGTTCTTCGGTGATGGTGTCCCGACGAAGAAAAATAC
584 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATAC
* * * * * * * *
16664128 GGCACCAGCACATGCCAGAGCCCAGTATGTGCTATCGCAA-CCCTCGGTCCGGTCCAATCTTAGA
649 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAATCCATCGGTCTGATCCGATCTTAGA
* * * * *
16664192 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGGAACGAGCGGGCGGGC
714 CTGGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
16664244 GAGCGGGCAC
Statistics
Matches: 2225, Mismatches: 263, Indels: 103
0.86 0.10 0.04
Matches are distributed among these distances:
860 159 0.07
861 440 0.20
862 70 0.03
863 3 0.00
864 1 0.00
867 4 0.00
868 4 0.00
869 1 0.00
870 2 0.00
871 2 0.00
877 3 0.00
878 1 0.00
879 1 0.00
880 1 0.00
882 1 0.00
883 6 0.00
884 1 0.00
885 6 0.00
886 7 0.00
887 236 0.11
888 558 0.25
889 704 0.32
890 14 0.01
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.27
Consensus pattern (862 bp):
GATCTTAGACTGGGAAGGAACTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCA
GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTAGTAG
ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAATACGG
CACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAATCCATCGGTCTGATCCGATCTTAGACT
GGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGA
GGGGCGGGATGCGCAAGTCGGGATCGATCCGGTCCCCTCTGTGTGCTGTCGATCCTGCTACCGCA
ACCCTCGGTCTCGGTCC
Found at i:16662450 original size:26 final size:26
Alignment explanation
Indices: 16662410--16662462 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16662400 CCAGTCTGAT
16662410 CTTAGACTGAAAATGAACTCCGTATG
1 CTTAGACTGAAAATGAACTCCGTATG
**
16662436 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAAAATGAACTCCGTATG
16662462 C
1 C
16662463 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAAAATGAACTCCGTATG
Found at i:16663328 original size:26 final size:26
Alignment explanation
Indices: 16663299--16663351 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16663289 CTGATCCGAT
*
16663299 CTTAGACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16663325 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16663351 C
1 C
16663352 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16664923 original size:26 final size:26
Alignment explanation
Indices: 16664872--16664924 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16664862 CCGGTTCAAT
* *
16664872 CTTAGGCTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16664898 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16664924 C
1 C
16664925 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16665764 original size:26 final size:26
Alignment explanation
Indices: 16665735--16665787 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16665725 TCGGTCTGAT
* *
16665735 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16665761 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16665787 C
1 C
16665788 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16665923 original size:863 final size:862
Alignment explanation
Indices: 16664184--16666833 Score: 3230
Period size: 863 Copynumber: 3.0 Consensus size: 862
16664174 GTCCGGTCCA
* *
16664184 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGGAACGAGCGGGCGGGCGAGCG
1 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG-GC-
* * *
16664249 GGCACTACG-CCGCCAGAGAGGCGAGATGCGCAAGCCGTGGATCGATAGGGTGGCAGGTGGGTTT
64 GGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT-GG--T
* * *
16664313 AGGCACATCTTCATATTTCTACCATGCCAATGCCCATCTTCTGGCTTGAAAATTCATACAATGGT
126 -GG---ATCTT-ATATTTCT-CCATGCCAATGCCCTTTTTCTGGCTTGTAAATTCATACAATGGT
* * * *
16664378 TCCTTAAGCATTCATGTAAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCATGATTTTTGA
185 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGA
*
16664443 AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAATGAGTTTTGGCCCCAAACTTGGTAG
250 AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAG
* *
16664508 ACGTGATCCTGGTATTTTTGTTGGCATG---------CA-C---AAA-T-GAAGTGTACAAGAGT
315 ACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * *
16664558 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAGTGGCAGCAAACCTGT
380 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGT
* * *
16664623 AAAATCTCAAATGCTCTTTAAGGGGGTGTGTGTTGTCGAGGTTTGATGAGGGATAGGGGCCCAAT
445 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAAAGGGG-CCAAT
*
16664688 ATAAGGGCCAAGTACCAGCACTCATCGCACATCATGTGCGCACAGCCCCCTGGCCCCCCCGATCG
509 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAG-CCCCT--------CGATCG
** * **
16664753 TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTATCCCGACGAAGAAAAATACGGCA
565 TCGGAACCCCAATAACGTCGGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCA
* * * * * *
16664818 CCAGCACAAGCCCGAGCCCAGCATGTGCTACCGT-AACCCTCGGCCCGGT-TCAATCTTAGGCTG
630 CCAGCACATGCTCGAGCCCAGCATGTGCTGCC-TCAACCCTCGG-TCGGTCT-GATCTTAGACTG
*
16664881 GGAATGAACT-TCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACG
692 GGAATGAACTCT-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACG
* * * * * * *
16664945 AGCGTGCAGGTGCTC-AGCAAGCCAGAGGGACGGGATGCACAAGCCGAGGATTGGCTGGGTTGCC
756 AGCGTGCGGGCGCTCAACCGA-CCAGAGGGGCGGGATGCACAAGCCGAGGA-TCGCTGGG-TCCC
** * * *
16665009 CTCTATGTGCTGCCAATCCTGCTGCCACAGCCCTTAGTCTGGTTCG
818 CTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTT-GTCTGGTTCG
* * *
16665055 ATCTTAGACTAGCAATGAACTCCGTATGCATAAGACAACCGACGAAACGAGCGGGCGGGCGGGCC
1 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-GG-C
* *
16665120 GGCACTACGTCGGCCATAGAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGT-G-GG-
64 GGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGTGGA
*
16665182 T-TT-T-TTTC-CCATGCCAATGCCCTTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
129 TCTTATATTTCTCCATGCCAATGCCCTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * *
16665243 CTTCATGTGAAGTTTCATGCCAAGACGACTCATTTTCAATTTTTCACGATTTTTAAAACTTTTTA
194 CTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTA
* * * * *
16665308 CGGTTCGAGATTTTTCAACATTTTTTCAGAGGGATTTTTGGCCCCAAACTTGGTAGACGGGATCC
259 CGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
*
16665373 TTATATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
324 TTGTATTTTTGTTGGCATGC---AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
16665438 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATC
386 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATC
*
16665503 TCAAATGCTCTTCAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAAAGGGGACCAATATAAGG
451 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAAAGGGG-CCAATATAAGG
** * * * * *
16665568 GCCAAGTACCAGCACCCATCGCACATCATGTGCGTGCAG-CCCT-TATCGCCGAAACGCCGATAA
515 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCTCGATCGTCGGAACCCCAATAA
* * * *
16665631 CG-CTGGTCAGGTTCTCCGACGCTGGTGTCTCGGTGAAAAAAAATGCGGCACCAGCACATGCTCG
580 CGTC-GGTCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCTCG
* *
16665695 AGCCCAGCATGTGCTGCCTCAACCATCGGTTCGGTCTGATCTTAGATTGGGAATGAACTCTGTAT
644 AGCCCAGCATGTGCTGCCTCAACCCTCGG-TCGGTCTGATCTTAGACTGGGAATGAACTCTGTAT
*
16665760 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA
708 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAA
* * *
16665825 CCGACTAGAGGGGCGAGATGCACAAGTCGAGGATCAGCTGGGTCCCCTTCTGCGTGCTGTCGATC
773 CCGACCAGAGGGGCGGGATGCACAAGCCGAGGATC-GCTGGGTCCCC-TCTGCGTGCTGTCGATC
* *
16665890 CTGCTGCCATAACCCTCTGTCTGGTTTG
836 CTGCTGCCACAACCCT-TGTCTGGTTCG
* * * *
16665918 ATCTTAGACTTGGAATGAACTCCGTACGCCTAAGCCAACCGACGAAACAAGTGGGCGGGC-G-GG
1 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGG
16665981 CACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT-GG--T-G
***
16666046 GAACATCTTCATATTTCTGCCATGCCAATGAAATTTTTCTGGCTTGTAAATTCATACAATGGTCC
127 G---ATCTT-ATATTTCT-CCATGCCAATGCCCTTTTTCTGGCTTGTAAATTCATACAATGGTCC
*
16666111 CTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
187 CTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAA
* * * *
16666176 CTTTTTATGATTTGGGATTTTTTAAAATTTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGA
252 CTTTTTACGGTTCGAGATTTTTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
16666240 CGTGATCCTTGTATTTTTTTTTGGCTTGCACAGGAAAATTCAGCTAAAAACTCAAAGTGTACAAG
316 CGTGATCCTTGTA-TTTTTGTTGGCATGCA-A--AAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
16666305 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGATACTTTAATTACTACTTGCAGCAAACC
377 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACC
* * * *
16666370 TGTAAAATCTCAAATGCTCTTTATGGGGGTGCGAGTTCTCGAGGTTTTATGAGGGATAAGGGGCA
442 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA-AAGGGGCC
16666435 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCACGGCCCCTCCGA
506 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CA----CA--GCCCCT-CGA
* * *
16666500 TCGTCGGAACCCCAATATCGTCGATCAGGTTCTTC-AGCGATGGTGTCCCGGTGAAGAAAAATAC
562 TCGTCGGAACCCCAATAACGTCGGTCAGGTTCTCCGA-CGATGGTGTCCCGGTGAAGAAAAATAC
* * *
16666564 GGCACCAGCACATG-TCAGAGTCTAGCATGTGCTG-CTGCAACCCTCGGTCTGGTCCGATCTTAG
626 GGCACCAGCACATGCTC-GAGCCCAGCATGTGCTGCCT-CAACCCTCGGTC-GGTCTGATCTTAG
* * * * ** * *
16666627 ACTGGAAATGAACTCCGTATGCTAAGATTCAGAATGAACTCTGTATGCCTAAGTCAACTCATGAA
688 ACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAA
* * ** *
16666692 ACGAGCCTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGTAAGCCGAGGATCGACCGGGTCT
753 ACGAGCGTGCGGGCGCTCAACCGACCAGAGGGGCGGGATGCACAAGCCGAGGATCG-CTGGGTC-
* * * * * *
16666757 CACTCTGCGTGCTGTCGATCCTGCTACTACAACCCTTGATCTGATCCC
816 CCCTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTTG-TCTGGTTCG
**
16666805 ATCTTAGACTAATAATGAACTCCGTATGC
1 ATCTTAGACTAGGAATGAACTCCGTATGC
16666834 TTAGACTGGG
Statistics
Matches: 1538, Mismatches: 171, Indels: 124
0.84 0.09 0.07
Matches are distributed among these distances:
856 182 0.12
858 4 0.00
859 58 0.04
861 4 0.00
862 8 0.01
863 297 0.19
864 6 0.00
865 2 0.00
866 2 0.00
868 2 0.00
869 2 0.00
870 3 0.00
871 65 0.04
872 54 0.04
873 6 0.00
874 179 0.12
875 161 0.10
876 208 0.14
877 6 0.00
882 2 0.00
884 1 0.00
885 4 0.00
886 10 0.01
887 269 0.17
888 3 0.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.26
Consensus pattern (862 bp):
ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGCGG
CACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGTGGATC
TTATATTTCTCCATGCCAATGCCCTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
TCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACG
GTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
GTATTTTTGTTGGCATGCAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
TGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAA
TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAAAGGGGCCAATATAAGGGCCAAG
TACCAGCACCCATCGCACATCATGTGCGCACAGCCCCTCGATCGTCGGAACCCCAATAACGTCGG
TCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAG
CATGTGCTGCCTCAACCCTCGGTCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
TGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAACCGACCAG
AGGGGCGGGATGCACAAGCCGAGGATCGCTGGGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCAC
AACCCTTGTCTGGTTCG
Found at i:16667018 original size:185 final size:185
Alignment explanation
Indices: 16666601--16667001 Score: 520
Period size: 185 Copynumber: 2.2 Consensus size: 185
16666591 TGTGCTGCTG
* *
16666601 CAACCCTCGGTCTGGTCCGATCTTAGACTGGAAATGAACTCCGTATGCTAAGATTCAGAATGAAC
1 CAACCCTCGGTCTGGTCCAATCTTAGACTGGAAATGAACTCCGTATGCTAAGACTCAGAATGAAC
* * * * *
16666666 TCTGTATGCCTAAGTCAACTCATGAAACGAGCCTGCGGGCGCTCAACCGGCCAGAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACAAGCCTGCGGGCGCTCAACCGGCCAGAGGGGCAGGAT
* ** * *
16666731 GCGTAAGCCGAGGATCGACCGGGTCTCACTCTGCGTGCTGTCGATCCTGCTACTA
131 GCGTAAGCCGAGGATCGACCGGGTCCCACTCTGCGTGCTACCGATCCTACTACGA
* * * * * * **
16666786 CAACCCTTGATCTGATCCCATCTTAGACT-AATAATGAACTCCGTATGCTTAGACTGGGAATGAA
1 CAACCCTCGGTCTGGTCCAATCTTAGACTGGA-AATGAACTCCGTATGCTAAGACTCAGAATGAA
* * *
16666850 CTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCTGGCGCTCAGCCGGCCAGAGGGGCAGGA
65 CTCCGTATGCCTAAGTCAACCCACGAAACAAGCCTGCGGGCGCTCAACCGGCCAGAGGGGCAGGA
* *
16666915 TGCGTAAGCCGAGGATC-AGCCGGGTCCCTCTTTGCGTGCTACCGATCCTACTACCGA
130 TGCGTAAGCCGAGGATCGA-CCGGGTCCCACTCTGCGTGCTACCGATCCTACTA-CGA
*
16666972 -AACCCTCGGTCCGGTCCAATCTTAGACTGG
1 CAACCCTCGGTCTGGTCCAATCTTAGACTGG
16667002 GAACAAACAC
Statistics
Matches: 182, Mismatches: 30, Indels: 7
0.83 0.14 0.03
Matches are distributed among these distances:
184 2 0.01
185 178 0.98
186 2 0.01
ACGTcount: A:0.24, C:0.29, G:0.26, T:0.21
Consensus pattern (185 bp):
CAACCCTCGGTCTGGTCCAATCTTAGACTGGAAATGAACTCCGTATGCTAAGACTCAGAATGAAC
TCCGTATGCCTAAGTCAACCCACGAAACAAGCCTGCGGGCGCTCAACCGGCCAGAGGGGCAGGAT
GCGTAAGCCGAGGATCGACCGGGTCCCACTCTGCGTGCTACCGATCCTACTACGA
Found at i:16667704 original size:26 final size:26
Alignment explanation
Indices: 16667652--16667704 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16667642 CCGGTCCGAT
*
16667652 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCAGATG
* *
16667678 CTTAGACTTGGAATGAACTCCGGATG
1 CTTAGACTGGGAATGAACTCCAGATG
16667704 C
1 C
16667705 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCAGATG
Found at i:16668580 original size:26 final size:26
Alignment explanation
Indices: 16668541--16668593 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16668531 CTAGTCTGAT
* *
16668541 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACCGAGAATGAACTCCGTATG
16668567 CTTAGACCGAGAATGAACTCCGTATG
1 CTTAGACCGAGAATGAACTCCGTATG
16668593 C
1 C
16668594 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACCGAGAATGAACTCCGTATG
Found at i:16668983 original size:889 final size:889
Alignment explanation
Indices: 16667023--16681816 Score: 20031
Period size: 889 Copynumber: 16.7 Consensus size: 889
16667013 GTATGCCTAA
* *
16667023 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCATATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * * * *
16667088 ATGTTTTTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTTATACAGTGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* **
16667153 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTTTGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * * *
16667218 TTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACCTGGCAGACGTGATCCTTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
16667283 TTTTTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
16667348 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* ** * *
16667413 AATGCTCTTTAAGGTGGTGTGAGTTCTTAAGGTTTGATGAGGGATATGGGGCAAATATAAGGGCC
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* *
16667478 AAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTTGGAACCCC
456 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCC
* * * * * *
16667543 AATGCCGCCGATCTGGTTCTCCGGTGATGTTGTCCCGATGAAGAAAAATACGGCACCAGCACATG
521 AATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATG
* * ** * *
16667608 CCAGAGCCCAGTATGTGCTATCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCC
586 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCC
* * * * *
16667673 ATATGCTTAGACTTGGAATGAACTCCGGATGCCTAAGTTAACCCACGAAGCGAGCGTGCGGGCGC
651 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * ** ** *
16667738 TCAGCCGACCAGAGGGGCGGGATGCACAAGCAGGGGATCGGTCGGGTCTGCCTCTGTATGCTACC
716 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCC
* ** * * * * *
16667803 GATCATGCTATCGTAACCCTCAATCTGGTCTGATTTTAGACTGGGAATAAACTCCGTATGCCTAA
781 GATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
16667868 GCCAACCAACAAAATGAACGGGCGAGCAGGCGGGCACTACACCG
846 GCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * *
16667912 GCCAGAGAGGCGAGATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTCC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
16667977 ATATTTCTGCCGTGCCAATGCCATTTTTCTGGCTTGGAAATTCATACAATGG-CCCTTTAAGCCT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCC-TTAAGCCT
*
16668041 TCATGTGAAGTTTCATGGCAATACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
130 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
* * ** *
16668106 GTTCGGGA-TTTTTACAAATTTTTTTAGAAGGAGTTTTGGGTCCAAACTTGGTAGACGTGATGCT
195 GTTCGAGATTTTTTA-AAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* * *
16668170 TATATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTAGAAGATTTTGTGAC
259 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
16668235 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
324 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
16668300 CAAATGCTCTTTAAGGGCGTGTGAGTTCTC-ATGGTTTGATGAGGGATAGGGGGCCAATATACGG
389 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * * *
16668364 GCCAAGTACCAGCACCCATCGTACATCATGTGCACACACCCCTCGGCCCCCCCGATCGCCTGAAC
453 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
* * ** *
16668429 CCCAATGTCGCCGGTTAGGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAGATGCGGCACCAGCAC
518 CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCAC
* *
16668494 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTAGTCTGATCTTAGACTGGGAATGAAC
583 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAAC
* * **
16668559 TCCGTATGCTTAGACCGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTTAGGG
648 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * ** *
16668624 CGCTCAGCCCGG-CAGAGGGGCAGGATGGGCAAGCCGAGGATCGACCGGGTCCCCCTCT-AGTGC
713 CGCTCAG-CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGC
* ** ** * * *
16668687 TACCGATCCTGCTGCTACAACTGTCACTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGC
777 TGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * * *
16668752 CTAAGCCAATCGATGAAACGGGTGGGCGGGCGGGCAGGCACTACGCCG
842 CTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * * *
16668800 GCCAGAAAGGTGGGATGCACAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
16668865 ATATTTCTGCCGTGCCAATCCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * *
16668930 CATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTCTCACAATTTTTTAAACTTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * ** *
16668995 TTCTG-GATTTTTTAAAATTTTTTCAAAAGGAGTTCTCACCCCAAACTTGGTAGACGTGATCTTT
196 TTC-GAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * *
16669059 GTATTTTTGTTGGCATGCACAAAAACAGTCAGCTAAAAACTCGTAGTGTACAAGATTTTGTGACC
260 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
*
16669124 ATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCA-CGAAACCTGTAAAATCT
325 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC-AAACCTGTAAAATCT
* *
16669188 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCACGAGGGATAGGGGGCCAATAT-AGGA
389 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG-
* * * * *
16669252 GCCAAGTTCCAGCACCCATCACCCATCATGTGCGCACA---------CCCCCCGATCGTCGAAAT
453 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
* * ** ** *
16669308 ACCAATGTCGTTGGTCAGGTTCTCCGGCGATGGTGTCCCGGTGAAGAAAAATGTGGCACCAGCAC
518 CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCAC
* * *
16669373 ATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTAGTCGGATCTTAGACTGGGAATGAAC
583 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAAC
* * * *
16669438 TCCATATGCTTAGACTGGGAATTAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGG
648 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
** * * * *
16669503 TACTGAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGCTCGGGTCCCCCTCTGCATGCT
713 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT
** * * * ** * *
16669568 ATCGATCCTGTTGCCGTAACCCTC-GATCTGCCCTGATCTTAGACTGGGAATAAACTCCATATGC
778 GCCGATCCTGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
*
16669632 CTAAGCCAACCGACGAAACG-GACGGGCGGGCAGGCAGGCACTACGCCG
842 CTAAGCCAACCGACGAAACGAG-CGGGCGGGCAGGCGGGCACTACGCCG
*
16669680 GCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * * *
16669745 ATATTTCTACC-TGGCCAATGCCATTTTTCAGGCTTGTAAATTCATTCAATGGTCACTTAAGCCT
66 ATATTTCTGCCAT-GCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * *
16669809 TCTTGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACG
130 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
* * * * * *
16669874 ATTTGATA-TTTTTAAAATTTTTTCAGAAGGAGTTCTCGCGCCAAACTTGGTAGACGTGATCCTT
195 GTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * *
16669938 GTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACT
260 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
16670003 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
325 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* *
16670068 AAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGCGGCCAATATAAGGGC
390 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
*
16670133 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCTCCGATCGTCGG-ACCC
455 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCC
* * * *
16670197 CAATGCCGCCGGTCAGGTTCTCCGACGATTGCGTCCCGACGAAGAAAAATACGGCACCAGCACAT
520 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
* * * *
16670262 GCCCGAGCCTAGCATGTGCTGCTGCAACCCTCGATCC-GATCTGATCTTAGACTGGGAATGAACT
585 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAG-TCCGATCTTAGACTGGGAATGAACT
* * * * *
16670326 CTGGATGCTTAGACTGGGAATTAACTCCATATGCCTAAGTCAACCCACG-GACTGAGCGTGCGGG
649 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC-GAGCGTGCGGG
* * * * * * *
16670390 CGCTCAGCCGGCCAGAGGGGCGTGATGTGCAAG-TGAGGGATCGGTCGGGTTCTCCTCTACGAGC
713 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG-GGGATCGGTCGGGTCCCCCTCTGCGTGC
* * * * * * *
16670454 TGCCAACCCTACTGCCACAACCCTCTA-TCCGATCTGATCTTACACTGGGATTGAACTCCGTATG
777 TGCCGATCCTGCTGCCGCAACCCTC-AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
16670518 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
841 CCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * *
16670567 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGTTGGGTGTAGGCATATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * * ** *
16670632 ATATTTTTGCCGTGACAACACCATTTTTCTGGCTTGTAAATTAATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
16670697 CATGTGAAGTTTCATGGCAAGACCACTCGTTTTCTATTTTTCACGATTTTTGAAATTTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * * *
16670762 TTCGAGATTTTTTAATATTTTTTCAAAAGGAGTTTTGGCCCCAATCATGGTAGACGTGATCCTTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
16670827 TATTTTTGCTGGCATGCACAAAACAATTCAGCTAAAAACTCCAAGTGTACAAGATTTTGTGACCA
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
16670892 TTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
16670957 AATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * *
16671022 AAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGTTGAAACCCT
456 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCC
* * * * **
16671086 ACTACCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGGAAAATGCGACATTAGCACATG
521 AATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATG
* * ** * * * * *
16671151 CCTGAGCCCAGCACGTGCTGCAACAACCCTCGATCCTGTCTGATCTTAGATTGGGAATGAACTGC
586 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCC
* * * * *
16671216 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACCAAATGAGCGTGCAGCCAC
651 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* ** * **
16671281 TCAGCCGGCGAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGTGTGCTATC
716 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCC
* *
16671346 GATCCTGCTGCCGTAGCCCTCAGTCCGGTCAT-ATCTTAGACTGGGAATGAACTCCGTATGCCTA
781 GATCCTGCTGCCGCAACCCTCAGTCCGGTC-TGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
16671410 AGCCAACTGTCGAAACGAGCGGGC-GG-A--CGGGCACTACGGCG
845 AGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * * *
16671451 GGCAGAGAGACAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTCA-GCACATCTT
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT-AGGCACATCTT
* * *
16671515 CATATTTTTTCCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
65 CATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * * *
16671580 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACAATTTCTGAAACTTTTTACT
130 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
*
16671645 GTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTT
195 GTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
16671710 TTATTTTTGTTGGCATGCACAAAAAAAATTCAG-TGAAAAACTCGAAGTGTACAAGATTTTGTGA
260 GTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGA
* *
16671774 CCATTTGAAAAAAGTGGCCCCATTTCAGACACCTTAATGGCTACTGGCAGCAAACCTGTAAAATC
323 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
**
16671839 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGATGGCCAATATAAGG
388 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
** * * * ** *
16671904 AACAAGTACCAGCACCCATTGCACATCATGTGTGCACACCCCCCGACCCCTTTCGATCATCGGAA
453 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCCGATCGTCGGAA
* * *
16671969 CCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGTACCAGCA
517 CCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCA
** * * * **
16672034 CATGCCCGAGCCCAGCATGTGCTATCACAACCCTCAGTCCAGTCTGATCTTCTACTGGGAATGAA
582 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAA
* * * * *
16672099 CTTCGTATGCTTCGACTGGGAATGAACTCCGTATACCTAAGTCAACCCATGAAACGAGCATGCGG
647 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* ** * *
16672164 GCGCTCAGTCGGCCAGAGGGGTAGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGT
712 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGC
* * ** **
16672229 TGCCGACCCTGCTGCAGCAACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTATATGC
777 TGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
** * * * * * *
16672294 CTAAGCCAATTGATGAAACGAACGGGTGGGCGGGTGGGCACTGCGCCG
842 CTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* ** *
16672342 TCCAGAGAGGCGGGATGCGCAAGTGGTGGAACGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * * *
16672407 ATATTTTTGTCATGCCAATACCATTTTTCTGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
**
16672472 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* *
16672537 TTCGAGATTTTTCAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTTATCCTTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
16672602 TATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCG
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
16672667 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT-GCAGCAAACCTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
16672731 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCC
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
16672796 AAGCACCAGC-CTCCATCGCACATCATGTGTGCACACCCCCTC-CCCGTCCCCCGTGATCGTCGG
456 AAGTACCAGCAC-CCATCGCACATCATGTGCGCACACCCCC-CGGCC--CCCCC--GATCGTCGG
* * * * * ** * *
16672859 AGCCCCAATGCTGTCGGTCAGGTTCTTCGACGATGGTGTCCCGGTGAAGACAAATACGGCACCAA
515 AACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACC-A
** * * * * *
16672924 G-ACATGCTGGAGCCCAACATGTGCTGCTGCAACCCACGTTCCGGTCCGATCTTAGACTGGGAAT
579 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAAT
* ** *
16672988 GAACTCCTTATGCTTAGACTGCAAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGCGTG
644 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * *
16673053 TGAGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCG
709 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCG
* * * * * *
16673118 TGCTGCTGATCCTGCTGCCACAACCATCAGTTCGATCTGATCTTAGACTGGGAATAAACTCCGTA
774 TGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
** * *
16673183 TGCCTAAGCCAACCGACGAAACGAGCGGGCGTACGGGCGGGCACTACGTCG
839 TGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * * *
16673234 GCCAGAGAGGTGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGCGGGTTTAGGCATATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
*
16673299 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACATTGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
16673364 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAA-TTTTTACG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT-AAAACTTTTTACG
*
16673428 GTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTATTGGCCCCAAACTTGGTAGACGTGATCCTT
195 GTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * *
16673493 GTATTTTTGCTGGCATGCACAAAACAATTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACC
260 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* * * *
16673558 ATTTGAAAAAAGTGTCCCTATTTCAAACACTTTAATGGCTACTGGTAGCAAACCAGTAAAATCTC
325 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* *
16673623 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGTGGGACAATATAAGGGC
390 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * ** *
16673688 CAAGTACCAGCACCCATCGCACATCATGTGCGCAAACCCCCCGACCCCCCCAATCACCGAAACCC
455 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCC
*** *
16673753 CAATGCCATTGGTCAGGTTCTCCGGCGATGGTG-CCTCGGA-GAAGAAAAATGCGACACCAGCAC
520 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCC-C-GACGAAGAAAAATGCGGCACCAGCAC
** * * ** *
16673816 ATGGTCGAGCCCAGCAAGTGCTACCAAAACCCTCGGTCCAGTCCGATCTTTGACTGGGAATGAAC
583 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAAC
* * * * *
16673881 TCCGTATGCTTAGACGGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAAGAGCATACGGG
648 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * ** * * * *
16673946 AGCTCAGTCGGCCAGAGTAGCGGGATTCGCAAGTCGGGGACCGGTCGGGTCCCCCTCTACGTGCT
713 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCT
*** * *
16674011 GCCGATCCTGCTGCCGCAACCCTCAGTCTAATCTGATCTTAGACTGGGAATAAACTTCGTATGCC
778 GCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* *
16674076 TAAGCCAACCGACGAAACGTGCGGGCGGGCGGGCGGGCACTACGCCG
843 TAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* *
16674123 GCCAGAGAGGCGGGATGTGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
*
16674188 ATATTTTTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
**
16674253 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTAAAACTTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * * *
16674318 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAATTTTAGCCCCAATCTTGGTAGACGTGATCCCTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * *
16674383 TATTTTTGTAGGCATGCACAAAAAAATTCAGCTAGAAATTCAAAGTGTACAAGATTTTGTGACCA
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
16674448 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * *
16674513 AATGCTCTTTAAGGGGGTCTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGAC
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * *
16674578 ACGTACCAGCACCCATCGTACAACATGTGCGCACACCCCCCCGG-CCCCCTGATCGTCGGAACCC
456 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCC
* * ** * **
16674642 TAATGCTGCCGGGAAGGTTCTCTGGCGATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACAT
520 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
* *
16674707 GCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGATCCAGTCCGATCTTAGACTGGGAATGAACTC
585 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTC
* * * *
16674772 CTTATGCTTAGACTGGGAACGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCAGGCG
650 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
** ** * *
16674837 CTCAATCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGACCCCATCTGCGTGCTGC
715 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * * * * * * * * *
16674902 CTATCTTGCTACAGTATCCCT-TGATTCGATCCGATCTTAGACTGAGAATGAACTCCGTATGCCT
780 CGATCCTGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
16674966 AAGCCAACCGACGAAACGAGCGGGCGGGTAGGCAGGCACTACACCG
844 AAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * *
16675012 GCGAGAGAGGTGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTCA-GCACATCTT
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT-AGGCACATCTT
16675076 CATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
65 CATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * * * *
16675141 TCATGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCACAATTTCTGAAACTTTTTACT
130 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACG
*
16675206 GTTCGAGATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
195 GTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
16675271 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAATAACTCGAAGTGTACAAGA-TTTGCTGAC
260 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG-TGAC
*
16675335 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTCAAATCT
324 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
16675400 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGG
389 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * **
16675464 CCAAGAACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCTCGATCGTCAAAAC
454 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-CGATCGTCGGAAC
** * * *
16675529 CCCAATGCCGCCGGGAAGGTTATCTGGCGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCAC
518 CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * *
16675594 ATGCCCGAGCCCAGCTTGTGCTACGGCAACCTTCGGT-CAGATCCGATCTTAGACTGGGAATGAC
583 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAG-TCCGATCTTAGACTGGGAATGAA
* ** * * * *
16675658 CTACGTATAATTAGACTGGGAATTAACTCCGTATACCCAAGTCAACCCATGAAACGAGCGTGCGG
647 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * * * * *
16675723 GCACTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCAGGTATCGGTCGGGTCCCTCTTTGCATGC
712 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGC
* * * * *
16675788 TGCCAATCCTACTGCTGCAACCCTCAGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTAT-C
777 TGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * ** * * * *
16675852 CTTAAGCCAACCGATGAAACAAATGGGC-GGAAGGGCGGGCATTAGGCGG
842 C-TAAGCCAACCGACGAAACGAGCGGGCGGGCA-GGCGGGCACTACGCCG
* *
16675901 GCCAGAGACGCGGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
*
16675966 ATATTTTTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
** **
16676031 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCCAAACTTTTTAATG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* *
16676096 TTCGAGATTTTTTAAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATCCTTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
16676161 TATTTTTTTTGGCATGCACAAGAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCA
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
16676226 TTTGAAAAAAGTGTCCCCATTTCAGATACTTTAAAGGCTACTGGCAGCAAACCTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
16676291 AATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
16676356 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCAATCGTCGGAACCC
456 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCC
* * * *
16676421 CAATACCGCCAGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGACACCAGCACAT
520 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
** * *
16676486 GCTAGAGCCAAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAAACTGGGAATGAACTC
585 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTC
* * *
16676551 CGTATGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCATGCGGGCG
650 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * ** *** * *
16676616 CTTAGCCGGCCAAAGGGTTGGGAAATGCAAGCCGAGGATCGATCGGGTCCCCCTCTGCGT-CTTG
715 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGC-TG
* * *
16676680 CCGATCTTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTACACTGGGAAAGAACTCCGTATGCCT
779 CCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* *
16676745 AAGCCAACCGACGAAACGAGCGGGC--G--GGCGGGCAGTACACCG
844 AAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * * * *
16676787 GCGAGAGAGGCGAGACGCACAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * *
16676852 ATATTTCTACCATTCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* ** ** * *
16676917 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATTATTTTCCAAACATTTTATGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * * * * * * *
16676982 TTCGGGATTTTTTTAAATTTTTTTAGATGGAGTTTTCGCCCGAAA-TTGGCATACGTGATCCTTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
16677046 TATTTTTTTTGGCATGCACAAAAAAAATT-TGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
261 TATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* * *
16677110 ATTTGAAAAAAGTGTACCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTC
325 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * *
16677175 AATTGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATG-GGGATAGGGGGCCAATATAAGGGA
390 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * *
16677239 CAAGTACCAGCTCCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAAAC
455 CAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACC
* *
16677304 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCAACGAAGAAAAATGTGGCACCAGCACA
519 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACA
*
16677369 TGCCCGAGCCCAGCATGTGCTGTCGCAA----C---CC--T-CGA---T---CT-GG--T----T
584 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACT
* *
16677411 -TG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGTAACGAGCGTGCGGGC
649 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * *
16677473 GCTCAGTCGACCATAGGGGCGGGATGCGCAAGCCGAGGATCGGTCAGGTCCCCTTCTGCGTGCTG
714 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTG
* *
16677538 CCGATCCTGCTACCGCAACCCTTAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
779 CCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
*
16677603 AAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACACCG
844 AAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * * * * *
16677649 ACCAAAGAGGCGGGATGTGCAAGTCGTGGATCGTTAGCGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
16677714 ATATTTCTGCCATGCCAATGTCATTTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
16677779 CATGTGAAGTTCCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * * * *
16677844 TTCGGGATTTTTTAAAAATTTTTCAGAAAGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
16677909 TTTTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCA
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
16677974 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
16678039 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * * *
16678104 AAGTAGCAGCACCCATCGTACATCATGTGCGCACACCCCCCCGACCCCTCCGGTCGGCGGAACCC
456 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCC
* * * * *
16678169 CAATGCCGCCGGTCAGATTGTCCGACGATGATGTCCCGACGAAGAAAAATGCGGCACCAGCAAAT
520 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
* * * * ** * *
16678234 GCCCGAGCCCAGCATGTGGTGCAGCAAACCTGGGTCTGGACCAATCTTAGACTGGGAATGAACTC
585 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTC
* * * * *
16678299 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAGTGTCCGAGCG
650 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * ** * * *
16678364 CTCAGCCAGCCAGAGGGGCGGGATGCGCACGTCGGGGATCGACCGAGTCTCGCTCTGCGTGCTGC
715 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* * * * * * *
16678429 CGATCCTGCTACCGTAGCCCTCGGTCTGGTCTGATCTTAGACTGAGAATAAACTCCGTATGCCTA
780 CGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
16678494 AGCCAA-CGATGAAACGACCGGGCGAGCAGGCGGGCACTACGCTG
845 AGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * * * * *
16678538 GCCAGAGAGACGGGATGCGTAAGCCGCGGATTGATAGGGTGGTAGGTAGGTTTAGGAACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
16678603 ATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
16678668 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * *
16678733 TTTGGGATTTTTTAAAATTTTTTCAGAACGAGTTTTGGCCCCAAACCTT-GTAGACGTGATCCTT
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA-CTTGGTAGACGTGATCCTT
* *
16678797 GTATTTTTGTAGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACT
260 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
16678862 ATTTGAAAAAAGTATCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
325 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* *
16678927 AAATGCTCTTTAAGGGGGTGTGAGTTCTC-ATGGTTTGATGAGAGATAGAGGGCCAATATAAGGG
390 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGGG
*
16678991 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCACCGG-CCCCCCGATCGCCGGAA
454 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCC-CCGGCCCCCCCGATCGTCGGAA
* ** * * *
16679055 CCCCAATACCATCGGTCAGGTTCTCCGGCGATGGTGTCCC-AGTGAAGAAAAATGTGGCATCAGC
517 CCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGC
*
16679119 ACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--T-C-G---G-TC-----C-------G-
581 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGA
*
16679161 A-TCCG-AT-CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
646 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * *
16679223 GGCACTCAGCCGGCCAGAAGGGTGGGATGTGCATGCCGGGGATCGG-CTGGGT-CCCCTCTGCGT
711 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGT
* * * * * * *
16679286 GCTGCCAATCCTGCTACTGCAACCCTCAGTCCAGTCTAATCTTAGACTGTGAATGGACTCCGTAT
775 GCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * * * *
16679351 GCCTAAGCCAACAGACAAAACGAACGGGCAGACGGGCGGGCACTACGTCG
840 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* *
16679401 GCCAGAGAGGCGGGATGCGCAAACCGTAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
16679466 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * * *
16679531 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTTATGATTTTCAAAAATTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* *
16679596 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAATTTTGCCCCCAAAC-T--T-GACGTGATCCTTG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
16679657 TATTTTTTTTGGCATGCACAAAAAAATTCTGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
16679722 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
16679787 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGTTTTGATGAGGGATAGGGGGCCAATATAAGGGAC
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
16679852 AAGTACCAGCTCCCATCACACATCATGTGCGCACACCCCCCCAG-CCCCCCGATCGTCGGAACCC
456 AAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCC
* * * * * * *
16679916 CAATGCCGCCGATCAGGTTCTTCGGCGATGGTGTCTCGATGAAAAAAAATGCCGCAGCAGCACAT
520 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
16679981 GCCCGAGCCCAGCATGTGCTGCCGCAACCCT---T---G---G----T-G-C--GG--T----T-
585 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTC
* * * * *
16680022 CG-AT-CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAAGCCACGTAACGAGCATGCGGGCA
650 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCG
* * * * *
16680085 CTCAGCCGACCATAGGGGCGGGATGCGCAAGTCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTAC
715 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGC
* *
16680150 CGATCCTGCTACCGCAACCCTC-GATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
780 CGATCCTGCTGCCGCAACCCTCAG-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
16680214 AATCCAACCGACGAAACAAGCGGGCGGGCAGGAGGGCACTACGCCG
844 AAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
* * * ** *
16680260 ACCAAAGAGGCGGGATGCGCAAGTCACGGATCGTTAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * *
16680325 ATATTT-T----TTCC-ATGCCA--ATTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
16680382 CATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACATTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* * * * *
16680447 TTCGGGATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGTCCCAAACTTGGTAGACATGATCCTGG
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
*
16680512 TATTTTTGTTGGCATGCACAAAGAAATTCAGCTAATAAA-TCGAAGTGTACAAGATTTTGTGACC
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA-AAACTCGAAGTGTACAAGATTTTGTGACC
*
16680576 ATATGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
325 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
*
16680641 AAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
390 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * *
16680706 CAAGTACTAGCACCCATCGTACATCATGTGCGCACACCCCCCGGCCCCTCCGATCGGCGGAACCC
455 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCC
* * * * *
16680771 TAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCAAAT
520 CAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACAT
* * * ** *
16680836 ACTCGAGCCCAGCATGTGCTGTCATAACCCTAGGTCCAGTCCAATCTTAGACTGGGAATGAACTC
585 GCCCGAGCCCAGCATGTGCTG-------CC---G--CA-ACC---C-T---C--GG--TCCAGTC
16680901 CGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
626 CG-AT-CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
16680966 CAACCCACGAAACGAGTGTGCGGGCGCTCATCCAGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT
689 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * **
16681031 CAGTCGGGTCTCTCTCTGCATGCTGCCGATCCTGCTGCCACAACCCTTGGTCCGGTCTGATCTTA
754 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTA
* * * *
16681096 GACTGAGAATCAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGAGCAGGCGGGCACT
819 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACT
16681161 ACGCCG
884 ACGCCG
** *
16681167 GCCAGAGAGATGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
1 GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
*
16681232 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTT
66 ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * * *
16681297 TATGTGAAGTTTCATGGAAAGACGACTTGTTTTTTATTTTTCATGATTTTTAAAACTTTTTACGG
131 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
* *
16681362 TTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTT
196 TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
16681427 TATTTTTGTAGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACTA
261 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * **
16681492 TTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTAGCAGCAAATTTGTAAAATCTCA
326 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
16681557 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCG
391 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
16681622 AAGTACCAGCACCCATCGCACATCATGTGCGCACATACCCCCCGGCCCCCCCGATCG-CTGGAAC
456 AAGTACCAGCACCCATCGCACATCATGTGCGCAC--ACCCCCCGGCCCCCCCGATCGTC-GGAAC
* * * *
16681686 CCTAATGCCGCCGGTCAGGTTCTCCGTCGATGGTGTCCCAACGAAGAAAAATACGGCACCAGCAC
518 CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * *
16681751 ATTCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGCCCGATCTTAGATTGGGAAGGAAC
583 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAAC
16681816 T
648 T
16681817 TTATATGTCG
Statistics
Matches: 12284, Mismatches: 1410, Indels: 420
0.87 0.10 0.03
Matches are distributed among these distances:
851 138 0.01
852 1 0.00
853 6 0.00
854 11 0.00
855 315 0.03
856 3 0.00
858 392 0.03
859 411 0.03
860 4 0.00
861 2 0.00
862 310 0.03
863 501 0.04
864 164 0.01
865 6 0.00
866 1 0.00
867 5 0.00
868 4 0.00
871 3 0.00
872 1 0.00
874 6 0.00
875 1 0.00
877 3 0.00
878 4 0.00
879 506 0.04
880 286 0.02
881 2 0.00
882 1 0.00
883 2 0.00
884 435 0.04
885 370 0.03
886 248 0.02
887 823 0.07
888 1201 0.10
889 3603 0.29
890 629 0.05
891 309 0.03
892 665 0.05
893 129 0.01
894 2 0.00
895 3 0.00
896 1 0.00
897 1 0.00
898 2 0.00
900 2 0.00
901 1 0.00
904 3 0.00
905 4 0.00
906 2 0.00
907 270 0.02
908 2 0.00
910 2 0.00
912 3 0.00
913 6 0.00
914 3 0.00
915 368 0.03
916 1 0.00
917 107 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (889 bp):
GCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
ATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGG
TTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCC
AATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATG
CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCC
GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCC
GATCCTGCTGCCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
GCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCACTACGCCG
Found at i:16670359 original size:26 final size:26
Alignment explanation
Indices: 16670307--16670359 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
16670297 CCGATCTGAT
**
16670307 CTTAGACTGGGAATGAACTCTGGATG
1 CTTAGACTGGGAATGAACTCCAGATG
* *
16670333 CTTAGACTGGGAATTAACTCCATATG
1 CTTAGACTGGGAATGAACTCCAGATG
16670359 C
1 C
16670360 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCAGATG
Found at i:16671231 original size:26 final size:26
Alignment explanation
Indices: 16671195--16671247 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16671185 CCTGTCTGAT
* *
16671195 CTTAGATTGGGAATGAACTGCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16671221 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16671247 C
1 C
16671248 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16672118 original size:26 final size:26
Alignment explanation
Indices: 16672082--16672132 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16672072 CCAGTCTGAT
* *
16672082 CTTCTACTGGGAATGAACTTCGTATG
1 CTTCGACTGGGAATGAACTCCGTATG
16672108 CTTCGACTGGGAATGAACTCCGTAT
1 CTTCGACTGGGAATGAACTCCGTAT
16672133 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.22, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTCGACTGGGAATGAACTCCGTATG
Found at i:16673014 original size:26 final size:26
Alignment explanation
Indices: 16672974--16673026 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16672964 CCGGTCCGAT
** *
16672974 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGCAAATGAACTCCGTATG
16673000 CTTAGACTGCAAATGAACTCCGTATG
1 CTTAGACTGCAAATGAACTCCGTATG
16673026 C
1 C
16673027 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTGCAAATGAACTCCGTATG
Found at i:16674788 original size:26 final size:26
Alignment explanation
Indices: 16674752--16674804 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16674742 CCAGTCCGAT
* *
16674752 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16674778 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16674804 C
1 C
16674805 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16675690 original size:26 final size:26
Alignment explanation
Indices: 16675642--16675692 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
16675632 AGATCCGATC
*
16675642 TTAGACTGGGAATGACCTACGTATAA
1 TTAGACTGGGAATGAACTACGTATAA
* *
16675668 TTAGACTGGGAATTAACTCCGTATA
1 TTAGACTGGGAATGAACTACGTATA
16675693 CCCAAGTCAA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.33, C:0.16, G:0.22, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTACGTATAA
Found at i:16676560 original size:26 final size:26
Alignment explanation
Indices: 16676531--16676583 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16676521 CCAGTCCGAT
*
16676531 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGAGAATGAACTCCGTATG
*
16676557 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAAACTGAGAATGAACTCCGTATG
16676583 C
1 C
16676584 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAAACTGAGAATGAACTCCGTATG
Found at i:16678315 original size:26 final size:26
Alignment explanation
Indices: 16678279--16678331 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16678269 CTGGACCAAT
16678279 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16678305 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16678331 C
1 C
16678332 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16680917 original size:26 final size:26
Alignment explanation
Indices: 16680881--16680959 Score: 158
Period size: 26 Copynumber: 3.0 Consensus size: 26
16680871 CCAGTCCAAT
16680881 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16680907 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16680933 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16680959 C
1 C
16680960 CTAAGTCAAC
Statistics
Matches: 53, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 53 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16682825 original size:16 final size:16
Alignment explanation
Indices: 16682801--16682863 Score: 65
Period size: 16 Copynumber: 3.9 Consensus size: 16
16682791 GGATTTTTTT
*
16682801 AGGACTTTGGATTTCA
1 AGGATTTTGGATTTCA
*
16682817 AGGATTTTGGATTTCGG
1 AGGATTTTGGATTTC-A
* *
16682834 GGGGTTTTGGATTT-A
1 AGGATTTTGGATTTCA
16682849 ATGGATTTTGGATTT
1 A-GGATTTTGGATTT
16682864 TTAGGGGTTT
Statistics
Matches: 38, Mismatches: 7, Indels: 4
0.78 0.14 0.08
Matches are distributed among these distances:
16 26 0.68
17 12 0.32
ACGTcount: A:0.19, C:0.05, G:0.32, T:0.44
Consensus pattern (16 bp):
AGGATTTTGGATTTCA
Found at i:16682871 original size:33 final size:33
Alignment explanation
Indices: 16682806--16682874 Score: 95
Period size: 33 Copynumber: 2.1 Consensus size: 33
16682796 TTTTTAGGAC
*
16682806 TTTGGATTTCAAGGATTTTGGATTTCGGGGGGT
1 TTTGGATTTCAAGGATTTTGGATTTCGAGGGGT
**
16682839 TTTGGATTT-AATGGATTTTGGATTTTTAGGGGT
1 TTTGGATTTCAA-GGATTTTGGATTTCGAGGGGT
16682872 TTT
1 TTT
16682875 AGAATCCTAG
Statistics
Matches: 32, Mismatches: 3, Indels: 2
0.86 0.08 0.05
Matches are distributed among these distances:
32 2 0.06
33 30 0.94
ACGTcount: A:0.16, C:0.03, G:0.32, T:0.49
Consensus pattern (33 bp):
TTTGGATTTCAAGGATTTTGGATTTCGAGGGGT
Found at i:16684069 original size:23 final size:21
Alignment explanation
Indices: 16684024--16684077 Score: 65
Period size: 23 Copynumber: 2.5 Consensus size: 21
16684014 GGACTGTGTA
*
16684024 TTTTTTTATTTTTGTTTCTGT
1 TTTTTTTTTTTTTGTTTCTGT
*
16684045 TTTGGTTTTTTTTTTGTTT-TGG
1 TTT--TTTTTTTTTTGTTTCTGT
16684067 TTTTTTTTTTT
1 TTTTTTTTTTT
16684078 GCATCAAAAA
Statistics
Matches: 29, Mismatches: 2, Indels: 5
0.81 0.06 0.14
Matches are distributed among these distances:
20 8 0.28
21 3 0.10
22 5 0.17
23 13 0.45
ACGTcount: A:0.02, C:0.02, G:0.13, T:0.83
Consensus pattern (21 bp):
TTTTTTTTTTTTTGTTTCTGT
Found at i:16684071 original size:17 final size:17
Alignment explanation
Indices: 16684032--16684076 Score: 72
Period size: 17 Copynumber: 2.6 Consensus size: 17
16684022 TATTTTTTTA
*
16684032 TTTTTGTTTCTGTTTTGG
1 TTTTT-TTTTTGTTTTGG
16684050 TTTTTTTTTTGTTTTGG
1 TTTTTTTTTTGTTTTGG
16684067 TTTTTTTTTT
1 TTTTTTTTTT
16684077 TGCATCAAAA
Statistics
Matches: 26, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
17 21 0.81
18 5 0.19
ACGTcount: A:0.00, C:0.02, G:0.16, T:0.82
Consensus pattern (17 bp):
TTTTTTTTTTGTTTTGG
Found at i:16684321 original size:24 final size:24
Alignment explanation
Indices: 16684241--16684326 Score: 118
Period size: 24 Copynumber: 3.5 Consensus size: 24
16684231 ATAGGGTGGC
* * **
16684241 TGGTCGGGTAGTTAGTAAGGTAAT
1 TGGTCGGGGAGTTGGTTGGGTAAT
*
16684265 TGGTCGGAGAGTTGGTTGGGTAAT
1 TGGTCGGGGAGTTGGTTGGGTAAT
16684289 TGGTCGGGGAGTTGGTTGGGTAAT
1 TGGTCGGGGAGTTGGTTGGGTAAT
16684313 TGGTCGGGGCAGTT
1 TGGTCGGGG-AGTT
16684327 CAGCGTCGTA
Statistics
Matches: 55, Mismatches: 6, Indels: 1
0.89 0.10 0.02
Matches are distributed among these distances:
24 51 0.93
25 4 0.07
ACGTcount: A:0.16, C:0.06, G:0.45, T:0.33
Consensus pattern (24 bp):
TGGTCGGGGAGTTGGTTGGGTAAT
Found at i:16684389 original size:14 final size:13
Alignment explanation
Indices: 16684370--16684406 Score: 56
Period size: 14 Copynumber: 2.7 Consensus size: 13
16684360 TTTCTGTTTT
16684370 TTTTTTGTTTGTTG
1 TTTTTT-TTTGTTG
16684384 TTTTTTTTTGTTTG
1 TTTTTTTTTG-TTG
16684398 TTTTTTTTT
1 TTTTTTTTT
16684407 TGTTTTGTTA
Statistics
Matches: 22, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
13 4 0.18
14 18 0.82
ACGTcount: A:0.00, C:0.00, G:0.14, T:0.86
Consensus pattern (13 bp):
TTTTTTTTTGTTG
Found at i:16684389 original size:17 final size:15
Alignment explanation
Indices: 16684364--16684411 Score: 78
Period size: 15 Copynumber: 3.1 Consensus size: 15
16684354 ATCTTATTTC
16684364 TGTTTTTTTTTTGTT
1 TGTTTTTTTTTTGTT
16684379 TGTTGTTTTTTTTTGTT
1 TG-T-TTTTTTTTTGTT
16684396 TGTTTTTTTTTTGTT
1 TGTTTTTTTTTTGTT
16684411 T
1 T
16684412 TGTTAAATAT
Statistics
Matches: 31, Mismatches: 0, Indels: 4
0.89 0.00 0.11
Matches are distributed among these distances:
15 15 0.48
16 2 0.06
17 14 0.45
ACGTcount: A:0.00, C:0.00, G:0.15, T:0.85
Consensus pattern (15 bp):
TGTTTTTTTTTTGTT
Found at i:16684648 original size:49 final size:49
Alignment explanation
Indices: 16684582--16685066 Score: 608
Period size: 49 Copynumber: 9.9 Consensus size: 49
16684572 ACAGAAAAGG
* *
16684582 GCTCCTCTTAACAGAGGCTCAACAACTTTAAAAATCTCATCTGGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
*
16684631 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTC-T-TGAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
* * * *
16684678 GCTCCTCTCAATAAAGGCTCCATAACTTTAAAAATCTCATCTAG-AAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
* *
16684726 GCTCCTCTCAGCAGAGGCTCAACAACTTT-AAAATCTCATCTGGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
* *
16684774 GCTCCTCTCAACAGAGGCTCCATAACTTT-AAAATCTCATCTTGAAAAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATC-TG---GAAAAA
* * *
16684826 GCTCCTCTCAGCAGAGGCTCCATAACTTTAAAAATTCTC-TCTTGAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATC-TGGAAAAA
* * * *
16684876 ACTCCTCTTAGCAGAGGTTCCACAACTTTAAAAATCTCATCTGGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
* * **
16684925 GCTCCTCTCAACAAAGGCTCCATAACTTTAAAAATTCTC-TCTTAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTGGAAAAA
* *
16684974 GCTCCTCTCAACAGAGGCTCGACAACTTTAAAATTCTCATCTTGG-AAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATC-TGGAAAAA
*
16685023 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAATTTCTCATCTG
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAA-ATCTCATCTG
16685067 TTTTCAAATT
Statistics
Matches: 383, Mismatches: 39, Indels: 28
0.85 0.09 0.06
Matches are distributed among these distances:
47 55 0.14
48 75 0.20
49 156 0.41
50 51 0.13
52 33 0.09
53 9 0.02
54 4 0.01
ACGTcount: A:0.36, C:0.26, G:0.11, T:0.26
Consensus pattern (49 bp):
GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
Found at i:16684982 original size:148 final size:148
Alignment explanation
Indices: 16684582--16685066 Score: 682
Period size: 148 Copynumber: 3.3 Consensus size: 148
16684572 ACAGAAAAGG
*
16684582 GCTCCTCTTAACAGAGGCTCAACAACTTTAAAAATCTCATCTGGAAAAAGCTCCTCTCAACAGAG
1 GCTCCTCTCAACAGAGGCTCAACAACTTTAAAAATCTCATCTGGAAAAAGCTCCTCTCAACAGAG
* * * *
16684647 GCTCCACAACTTTAAAAATCTCT-TGAAAAAAGCTCCTCTCAATAAAGGCTCCATAACTTTAAAA
66 GCTCCATAACTTTAAAAATCTCTCTTAAAAAAGCTCCTCTCAACAGAGGCTCCATAACTTTAAAA
16684711 A-TCTCATC-T-AGAAAA
131 ATTCTCATCTTGAGAAAA
*
16684726 GCTCCTCTCAGCAGAGGCTCAACAACTTT-AAAATCTCATCTGGAAAAAGCTCCTCTCAACAGAG
1 GCTCCTCTCAACAGAGGCTCAACAACTTTAAAAATCTCATCTGGAAAAAGCTCCTCTCAACAGAG
*
16684790 GCTCCATAACTTT-AAAATCTCATCTTGAAAAAAAAAGCTCCTCTCAGCAGAGGCTCCATAACTT
66 GCTCCATAACTTTAAAAATCTC-TCTT----AAAAAAGCTCCTCTCAACAGAGGCTCCATAACTT
*
16684854 TAAAAATTCTC-TCTTGAAAAAA
126 TAAAAATTCTCATCTTGAGAAAA
* * * * * *
16684876 ACTCCTCTTAGCAGAGGTTCCACAACTTTAAAAATCTCATCTGGAAAAAGCTCCTCTCAACAAAG
1 GCTCCTCTCAACAGAGGCTCAACAACTTTAAAAATCTCATCTGGAAAAAGCTCCTCTCAACAGAG
* *
16684941 GCTCCATAACTTTAAAAATTCTCTCTTAAAAAAGCTCCTCTCAACAGAGGCTCGACAACTTT-AA
66 GCTCCATAACTTTAAAAA-TCTCTCTTAAAAAAGCTCCTCTCAACAGAGGCTCCATAACTTTAAA
16685005 AATTCTCATCTTG-GAAAA
130 AATTCTCATCTTGAGAAAA
* *
16685023 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAATTTCTCATCTG
1 GCTCCTCTCAACAGAGGCTCAACAACTTTAAAA-ATCTCATCTG
16685067 TTTTCAAATT
Statistics
Matches: 305, Mismatches: 22, Indels: 24
0.87 0.06 0.07
Matches are distributed among these distances:
142 8 0.03
143 48 0.16
144 28 0.09
147 42 0.14
148 85 0.28
149 5 0.02
150 30 0.10
151 47 0.15
152 8 0.03
153 4 0.01
ACGTcount: A:0.36, C:0.26, G:0.11, T:0.26
Consensus pattern (148 bp):
GCTCCTCTCAACAGAGGCTCAACAACTTTAAAAATCTCATCTGGAAAAAGCTCCTCTCAACAGAG
GCTCCATAACTTTAAAAATCTCTCTTAAAAAAGCTCCTCTCAACAGAGGCTCCATAACTTTAAAA
ATTCTCATCTTGAGAAAA
Found at i:16687085 original size:26 final size:26
Alignment explanation
Indices: 16687045--16687097 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16687035 CCGGTCCAAT
*
16687045 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16687071 CTTAGACT-GGAAATGAACTCCGTATG
1 CTTAGACTAGG-AATGAACTCCGTATG
16687097 C
1 C
16687098 CTAAGTGAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 2 0.08
26 23 0.92
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16687948 original size:26 final size:26
Alignment explanation
Indices: 16687919--16687968 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
16687909 GTCTGATCTG
*
16687919 AGACTGGGAATGAACTCCGTATGCTT
1 AGACAGGGAATGAACTCCGTATGCTT
16687945 AGACAGGGAATGAACTCCGTATGC
1 AGACAGGGAATGAACTCCGTATGC
16687969 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.28, T:0.22
Consensus pattern (26 bp):
AGACAGGGAATGAACTCCGTATGCTT
Found at i:16688844 original size:26 final size:26
Alignment explanation
Indices: 16688803--16688852 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
16688793 GTCTGATCTG
* *
16688803 AGACTGGGAGTTAACTCCATATGCTT
1 AGACTGGGAATGAACTCCATATGCTT
*
16688829 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCATATGC
16688853 CTAAGTCAAC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCATATGCTT
Found at i:16688929 original size:884 final size:891
Alignment explanation
Indices: 16687123--16689004 Score: 2657
Period size: 884 Copynumber: 2.1 Consensus size: 891
16687113 AAACGAGCGT
* * * *
16687123 GCGGGATGCGCAAGCTGGGGATCGGTCGGGACCCCCTCTACGTGCTGCCGATCCTGCTGCCGCCA
1 GCGGGATGCGCAAGC-CGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACT---GCCA
* * * * *
16687188 CAAACCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAA
62 CAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGACGAA
*
16687253 ACGAGCGAGCGGGCACTACTCCAGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGG
127 ACGAACGAGCGGGCACTACTCCAGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * * ** * *
16687318 TAGTTGGGTTTAGGCACATCTTCATATTTTTGCTGTGCCAATGCCATTTTTTTTGGGCTTGTAAA
192 TAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAATTTTTCTGGGCTTGTAAA
*
16687383 TTCCATACAATGGTCCCTTAGCCTTGAGTGGAAGTTTCATGGCAAAGACGACTTGTTTTCTATTT
257 TTCCATACAATGGTCCCTTAGCCTTCAGTGGAAGTTTCATGGCAAAGACGACTTGTTTTCTATTT
* * ** * * *
16687448 TTCATGATTTTTGAAACTTTTTATGGTTTTGGGATTTTTATAAAAGTTTTTTCAGAAGGAGTTTT
322 TGCACGATTTTCAAAACTTTTTACGGTTTCGAGATTTTTATAAAAGTTTTTTCAGAAGGAGTTTT
* *
16687513 GGCCTCCAACTTTGTAGACTAATCCTTGTATTTTTTGTTGGCATGCAACAAAAAACTATCAGCTA
387 GGCCTCCAACTTGGTAGACTAATCCTTGTATTTTTTGTTGGCATGCAACAAAAAAATATCAGCTA
* *
16687578 AAAACCACGATAGTGTACAACTTTTGTGACCATTCGAAAAAAAGTGTCCCCATTTCAGACACTTT
452 AAAACCACGATAGTGTACAAATTTTGTGACCATTCGAAAAAAAGTGTCCCCATTTCAAACACTTT
16687643 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
517 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
16687708 TTCGATGAGGGATAGGGGGCCATTATAAGGGCCAAGTATCAGCACCCATCGCACATCATGTGTGC
582 TTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * * ** * * *
16687773 ACACCCCCCGGGCCGCCTCGATCGCCGGAACCTCAATGTCGTCGGTCAGGTTCTCCGACGATGGT
647 ACACCCCCCGGCCCCCCTCGATCACCGGAACCCCAATACCGCCGATCAGGTTCTCCGACGACGGT
* * * * ** *
16687838 GTCCCGACAAAGAAAAATACGGCACCAGCACATGGCAGAGCCCAGCATGTGCTACCGTAATCCTC
712 GACCCGACAAAGAAAAATACGACACCAGCACATGCCAGAACCCAGCATGTGCTACCACAACCCTC
*
16687903 AATCCGGTCTGATCTGAGACTGGGAATGAACTCCGTATGCTTAGACAGGGAATGAACTCCGTATG
777 AATCCGGTCTGATCTGAGACTGGGAATGAACTCCATATGCTTAGACAGGGAATGAACTCCGTATG
* * * *
16687968 CCTAAGTCAACCCACGAGAGGAGCGTACGGGCCCTTAGTCGGCCAGAAGG
842 CCTAAGTCAACACACGAAACGAGCGTACGGGCCCTCAGTCGGCCAGAAGG
* * * * *
16688018 GAGGGATACGCAAGCCGGGCGTCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTACTGCCATAA
1 GCGGGATGCGCAAGCCGGG-ATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAA
* *
16688083 CCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCTTATGCCTAAGCCAAATGACGAAACG
65 CCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGACGAAACG
* * *
16688148 AACGGGCGGGCACTACGT-CGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
130 AACGAGCGGGCACTAC-TCCAGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*
16688212 GGTGGGTTTAGGCACATCTTTATATTTCTACCATGCCAATG-CAATTTTTCT-GGCTTGTAAATT
194 GGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAATTTTTCTGGGCTTGTAAATT
16688275 -CATACAATGGTCCCTTAAGCCTTCA-TGTGAAGTTTCATGGC-AAGACGACTCT-TTTTCTATT
259 CCATACAATGGTCCCTT-AGCCTTCAGTG-GAAGTTTCATGGCAAAGACGACT-TGTTTTCTATT
* *
16688336 TTGCACGATTTTCAAAACTTTTTACGG-TTCGAGATTTTT-TAAAATTTTTTTCAGAAGTAGTTT
321 TTGCACGATTTTCAAAACTTTTTACGGTTTCGAGATTTTTATAAAAGTTTTTTCAGAAGGAGTTT
*
16688399 TGGCC-CCAAACTTGGTAGACGTGATCCTTGTATTTTTT-TTGGCATGC-ACAAAAAAAT-TCAG
386 TGGCCTCC-AACTTGGTAGAC-TAATCCTTGTATTTTTTGTTGGCATGCAACAAAAAAATATCAG
* *
16688460 CTAAAAA-CTCGA-AGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAAACA
449 CTAAAAACCACGATAGTGTACAA-ATTTTGTGACCATTCGAAAAAAAGTGTCCCCATTTCAAACA
16688522 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
513 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
*
16688587 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC-GACACCCATCGCACATCATG
578 GAGGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG-CACCCATCGCACATCATG
*
16688651 TGCGCA-ATCCCCCCTGGCCCCCCTCGATCACCGGAACCCCAATACCGCCGATCAGGTTCTCCGG
642 TGCGCACA-CCCCCC-GGCCCCCCTCGATCACCGGAACCCCAATACCGCCGATCAGGTTCTCCGA
* ** * *
16688715 CGACGGTGACTCGACAAAGAAAAATGTGACACCAGCACATGCCTGAACCCAGCATGTGCTCCCAC
705 CGACGGTGACCCGACAAAGAAAAATACGACACCAGCACATGCCAGAACCCAGCATGTGCTACCAC
** * * *
16688780 AACCCTCGGTCCGGTCTGATCTGAGACTGGGAGTTAACTCCATATGCTTAGACTGGGAATGAACT
770 AACCCTCAATCCGGTCTGATCTGAGACTGGGAATGAACTCCATATGCTTAGACAGGGAATGAACT
** * *
16688845 CCGTATGCCTAAGTCAACACACGAAACGAGCGTGTGGGCGCTCAGTCGGCCAGAGGG
835 CCGTATGCCTAAGTCAACACACGAAACGAGCGTACGGGCCCTCAGTCGGCCAGAAGG
* * * * * **
16688902 GCGGGATGCGTAAGCCGAAGATCGGTCGGGTCACCCTCTGGGTGCTGCCGATCCTACTACTGCAA
1 GCGGGATGCGCAAGCCG-GGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAA
*
16688967 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTC
65 CCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTC
16689005 TGTACGCTTA
Statistics
Matches: 877, Mismatches: 98, Indels: 35
0.87 0.10 0.03
Matches are distributed among these distances:
882 2 0.00
883 167 0.19
884 306 0.35
885 12 0.01
886 11 0.01
887 47 0.05
888 26 0.03
889 58 0.07
890 33 0.04
891 8 0.01
892 157 0.18
893 1 0.00
894 3 0.00
895 46 0.05
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
GCGGGATGCGCAAGCCGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAAC
CCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGACGAAACGA
ACGAGCGGGCACTACTCCAGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
TGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCAATTTTTCTGGGCTTGTAAATTCC
ATACAATGGTCCCTTAGCCTTCAGTGGAAGTTTCATGGCAAAGACGACTTGTTTTCTATTTTGCA
CGATTTTCAAAACTTTTTACGGTTTCGAGATTTTTATAAAAGTTTTTTCAGAAGGAGTTTTGGCC
TCCAACTTGGTAGACTAATCCTTGTATTTTTTGTTGGCATGCAACAAAAAAATATCAGCTAAAAA
CCACGATAGTGTACAAATTTTGTGACCATTCGAAAAAAAGTGTCCCCATTTCAAACACTTTAATG
GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTCG
ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
CCCCCGGCCCCCCTCGATCACCGGAACCCCAATACCGCCGATCAGGTTCTCCGACGACGGTGACC
CGACAAAGAAAAATACGACACCAGCACATGCCAGAACCCAGCATGTGCTACCACAACCCTCAATC
CGGTCTGATCTGAGACTGGGAATGAACTCCATATGCTTAGACAGGGAATGAACTCCGTATGCCTA
AGTCAACACACGAAACGAGCGTACGGGCCCTCAGTCGGCCAGAAGG
Found at i:16689091 original size:185 final size:185
Alignment explanation
Indices: 16688776--16689190 Score: 573
Period size: 185 Copynumber: 2.2 Consensus size: 185
16688766 GCATGTGCTC
* * * * *
16688776 CCACAACCCTCGGTCCGGTCTGATCTGAGACTGGGAGTTAACTCCATATGCTTAGACTGGGAATG
1 CCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATACGCTTAGACTGGGAATG
* *
16688841 AACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTGTGGGCGCTCAGTCGGCCAGAGGGGCGG
66 AACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTGCGAGCGCTCAGTCGGCCAGAGGGGCGG
** **
16688906 GATGCGTAAGCCGAAGATCGGTCGGGTCACCCTCTGGGTGCTGCCGATCCTACTA
131 GATGCACAAGCCGAAGATCGGTCGGGTCACCCTCTACGTGCTGCCGATCCTACTA
** **
16688961 CTGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTACGCTTAGACTGGGAATG
1 CCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATACGCTTAGACTGGGAATG
* * * *
16689026 AACTTCGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGATCGCTCAG-CGGGCCAGAGGGGCG
66 AACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTGCGAGCGCTCAGTC-GGCCAGAGGGGCG
* * * *
16689090 GGATGCACAAGCCGAGGATCGGTTGGGTCCCCCTCTACGTGCTGCCGCTCCTACTA
130 GGATGCACAAGCCGAAGATCGGTCGGGTCACCCTCTACGTGCTGCCGATCCTACTA
* *
16689146 CCACAATCCTCGATCTGGT-TCGATCTTAGACTGGGAATGAACTCC
1 CCACAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCC
16689191 GTATGCCTAA
Statistics
Matches: 200, Mismatches: 28, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
184 2 0.01
185 198 0.99
ACGTcount: A:0.22, C:0.28, G:0.29, T:0.21
Consensus pattern (185 bp):
CCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATACGCTTAGACTGGGAATG
AACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTGCGAGCGCTCAGTCGGCCAGAGGGGCGG
GATGCACAAGCCGAAGATCGGTCGGGTCACCCTCTACGTGCTGCCGATCCTACTA
Found at i:16690178 original size:26 final size:26
Alignment explanation
Indices: 16690142--16690194 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16690132 CCGGTCCGAT
16690142 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16690168 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16690194 C
1 C
16690195 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16691790 original size:890 final size:889
Alignment explanation
Indices: 16689714--16704148 Score: 18520
Period size: 889 Copynumber: 16.4 Consensus size: 889
16689704 TCGTTTTCTT
*
16689714 ATTTTTTCCAAAAGGGAGTTTCT-GCCCCAATACTTGGTAGACGTGATCTCGTTGGTATTTTT-T
1 ATTTTTT-CAGAA-GGAGTTT-TGGCCCCAA-ACTTGGTAGACGTGATC-C-TT-GTATTTTTGT
*
16689777 TCGGCATGCACATAAAAAATTGCAGCT-AAAACTC-AAG-GTACAAGATTTTGTGACCATTTTAA
59 T-GGCATGCACA-AAAAAATT-CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA-TTTGA
* *
16689839 AAAAAGTGT-CACATTTCAGA-ACTTTAATGGCTACT-GCAAGC-AA-CTAGTAAAATCTTTAAA
120 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC-AGCAAACCT-GTAAAATC--TCAA
* *
16689899 ATGCTCTTTAAGTGGGTGGTGAGTTTCCTCGAGGTTTGATGAGGGATAGGTGGGTCACATATAAG
181 ATGCTCTTTAAGGGGGT-GTGAG-TT-CTCGAGGTTTGATGAGGGATAGG-GGGCCA-ATATAAG
** * *
16689964 GGCCAAAGTA-GGGCA-CCATCGCACATCATGTGCGCACACCCCCCGACCCCTCCCGATC-ACAG
241 GGCC-AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCCGATCGTC-G
* * * * * **
16690026 GAACCCTAATGCCGTCGATCAGGTTCTTCGGCGATGGTGTCCCGACGAAGAGAAATGCAACACCA
303 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCA
* * * *
16690091 GCACATGCTCGAGCCCAGCATGTGCTGCCGTAACCCTCGATCCGGTCCGATCTTAGACTGGGAAT
368 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAAT
* * *
16690156 GAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCATG
433 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * ** *
16690221 CGGGCACTCAGCCGGCCTGGAGGGGCGAGATGCACAAGACGGGGATCAATCGGATCCCCCTCTGC
498 CGGGCGCTCAGCCGGCC-AGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGC
* * * ** *
16690286 ATGCTGCGGATCCTGCTACTACAACCCTCGGT-TCGGT-TCGATCTTAGACTGGGAATGAATTCC
562 GTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCT-GGTCT-GATCTTAGACTGGGAATGAACTCC
* * * *
16690349 GTATGCCTAAGCCAACCGACAAAACAAACGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGGC
625 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGC
*
16690414 GGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC
690 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCC
16690479 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
755 ATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTT
* * *
16690544 TCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTCGAAAACTTTTTACGGTTCGGGATTT
820 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG-AAACTTTTTACGGTTCGGGATTT
*
16690609 TTAAGAA
884 TTTA-AA
* *
16690616 ATTTTTT-AGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
16690680 CACAACAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
16690745 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * * * *
16690810 CTGTGAGTTCTCAAGGTTTGATGAGAGATAAGGGGCCAGTACAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
16690875 CGCACATCATGTGCGTACACCCCCCGGCACCCCCGATCGTCGGAACCCCAATGCCGTCGATCAGG
261 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
* * * *
16690940 TTCTTCGACGATGGTGTCCCGACAAAGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCATGT
326 TTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * * *
16691005 GCTGCCACAACTCTCGGTCTGATCCGATCTTAGACTGGAAATGAACTCCATATGCTTAGATTGGG
391 GCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * ** * *
16691070 AATGAACTTCGTATGCCTAAGTTAACCCATAAAACGAGCATACGGGCGCTCAGCCGGCCAGAGGG
456 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* *
16691135 GCAGGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAA
521 GCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAA
* * *
16691200 CCCTCAGTCTGGTCAT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAT
586 CCCTCGGTCTGGTC-TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * *
16691264 GAGCGAGCGGGCGGGCTGGCACTACGCCTGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGACA
650 GAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
* *
16691329 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGGCATTTTTCTGGCTTG
715 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
* *
16691394 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTTAAGTTTCATGGAAAGACGACTCGTTTTCTA
780 TAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* *
16691459 TTTTTCATGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAA
845 TTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * *
16691504 ATTTTTTCAAAAGGAGTTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGTATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * * *
16691569 CTCAAAACAATTCAGCTAAAAACTCAAAGTGTACAAGATTTGGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
16691634 CCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
16691699 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAGGTACCAGTACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * * * *
16691764 CGAACATCATGTACG--CA------GACCCCCCCGATTGTCGGAGCCCCAATGTCGTCAGTCAGG
261 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
** * *** * * *
16691821 TTCTTTGGCGATGGTGTCCCGGTAAAGAAAAATACGACACCAGCACATGCCCGAGCCTAGCA-GC
326 TTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG-
** * * * *
16691885 TGCTGTTGCAATCCTCGGTCCAATCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGG
390 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
16691950 GAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCTCTCAGCTGGCCAGA-T
455 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * ** ** * *
16692014 GGTGGCATGCACAAGCTGGGGATCGGTCGGGTCCTCCTCAACGTGCTGCTAATCCTGCTCCCACA
520 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * * * * * *
16692079 ACCCTCGGTATGAT-TCGATCTTAGACTGGGAATCAACTCTGTAAGCCTAAGCCACCCGATGAAA
585 ACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
** * *
16692143 CGATTGGGCAGGCGGGCGGGCACTACGCCGGCCAAAGAGGCGGGATGCGCAAGCCGTGGATCGAT
649 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * * *
16692208 AGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCGATTTTTTTGGCTT
714 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
* * *
16692273 GTAAATTCAAACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCGTGGCAAGACGACTCGTATTCT
779 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* *
16692338 ATTTTTCACGATTTTGGAAACTTTTTACGGTTCGGGATTTTTTCAA
844 ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * * *
16692384 ATTTTTTCAAAAGGAGTTTTAGCCCCAAACTTGGTAGATGTGATCCTTGCATTTTTTTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * * *
16692449 CATAAAACAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
16692514 CCATTTCATACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGAG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
16692579 GAGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCC-A-AT-A----CAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * * * * *
16692637 CGAACATCATGTGCGCAGACCCCCCCGACCCCCCCAATCGCCGGAACCCCATTGACG-CTTGTCA
261 CGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCA
* * * ** *
16692701 GGTTCTCTGGCGATGGTGTCCCGACAAAGAAAAATATGGCACCAGCAAATGCCCGAGCCCAGCAT
324 GGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * *** ** * * *
16692766 TTGCTACCGCAATAATCGGTCC-AGTTTGATCTTAGA-TCAGGAATGAACTCTGTATGCTTAGAT
389 GTGCTGCCGCAACCCTCGGTCCGA-TCCGATCTTAGACT-GGGAATGAACTCCGTATGCTTAGAC
* *
16692829 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCACTCAGCCGGCCAG
452 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * ** *
16692894 A-GGGCGGGATGCGCAATCTGGGGATCGGTCGGGTCCCCCTC-GACGTGCTGCTAATCCTACTGC
517 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTG-CGTGCTGCCGATCCTGCTGC
* * * * *
16692957 CGCAACCCTCAGTCTGAT-TCGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACTGAC
581 CGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * *
16693021 GAAACGAGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGGTGCGCAAGCCGTCGAT
645 GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* * *
16693086 CGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCACATTTTTGCCATGCCAATGCCATTTTTCTG
710 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTG
*
16693151 GCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCATGTGAAGTTTCATGGCAAGA-GACTCGTT
775 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * *
16693215 TTCTATTTTTCACGATTTTGGAAACTTTTTATGGTTCGAGATTTTTTAAA
840 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* *
16693265 ATTTTTTCAGAAGGAGTTTTAGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
16693330 CACAAAATAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
16693395 CCATTTTAAACACTTTAATGGCTACCGGCAGCAAACCTGTAAAATCTCAAATGCTCTTCAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
16693460 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGTACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
*
16693525 CGCACATCATGTGCGCACACCCCCCGGCACCCCCCGATCGTCGGAACCCCAATGCCG-CTTGTCA
261 CGCACATCATGTGCGCACACCCCCCGGC-CCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCA
* * *
16693589 GGTTCTCCGGCGATGGTGT-CCTAGCGAAGAAAAATGCGGCACTAGCACATGCCCGAGCCCAGCA
324 GGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
** * * *
16693653 TGTGCTGTCC-CAACCCTCGGATTAG-TTCGATCTTAGACTGGGAATTAACTTCGTATGCTTAGA
388 TGTGCTG-CCGCAACCCTCGG-TCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * * * * *
16693716 CTGGGAATGAACTCTGTATGCCTAAGTCAATCGATGAAACAAGCGTGTGGTCGCTCAGCGGGCCA
451 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * * *
16693781 GAGGGGCGGGATGCACAAGCCGGGGATCGGTTGGGTCCCCCTCTACGTGCTGCCAATCCTACGGC
516 GAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
** ** * *
16693846 CATAACCCTCAATCTGGT-TCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACTGAC
581 CGCAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * ** * *
16693910 GAAACGAGTGGGCGGGCGGGCGGTCACTACGTCGGCCAGAGAGGTAGGATGTGCATGCCGTGGAT
645 GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGAT
* * * *
16693975 CGATAAGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTTTGCCTTGCCAATGCCATTTTTCTG
710 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTG
* *
16694040 G-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTCAAGTTTCATGGCAAGATGACTCGTT
775 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
* * ** *
16694104 CTCTATTTTTCATGATTTTCAAAACCTTTTACGGTTCGGGATTTTTTAAA
840 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* *
16694154 ATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATT
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
16694219 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
16694284 CCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
16694348 GTGCGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * * *
16694413 CGCACATCATGTGCGTACACCTCCCGGGCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGG
261 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
* ** * ** * *
16694478 TTCCCCCG-CGATGGTGTCCCGGTGAAGAAACATATGGTACCAGCACATGCCCGAGCCCAACATG
326 TT-CTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * *
16694542 TGCTGCTGCAACCCTCGATCC-AGTCTGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTA
390 TGCTGCCGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
** * * *
16694606 CAAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAACTGGCCAGAG
454 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
** * * *
16694671 GGGCGGGATGCGCAAGTTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCAATCCTGCTGCCAC
519 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
*** * *
16694736 AACCCTTAATCTGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAA
584 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
16694801 TGAGCGGGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGGCGGGATGTGCAAGCCGTGGATCGAT
649 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * * *
16694866 AGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTACCATGCCAATCCCATTTTTCTAGCTT
714 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTT
16694931 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
779 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * *
16694996 ATTTTTCATGATATTTGAAACATTTTACGGTTCGGGATTTTTTAAA
844 ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * *
16695042 ATTTTTTCAGAAGGAGTTTTGGCCCCAAGCTTGGTAGACCTGATCCTTGTATTTTTGTTGGCTTG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
16695107 CACAAAAAAATTCAGCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
16695172 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
16695236 GTTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTACCAGCACCCA
196 G-TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * * *
16695301 TCGCACATCATGTGAGCAGACCCCCCGGCCCCCCCGATCATCGGAACCCTAATGCCGTCAGTCAG
260 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAG
* * *
16695366 GTTCTCCGGCGATGGTGTCTCGGCGAAGAAAAATGCGGCACCCA-CACATG-CCGAGCCCAGCAT
325 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCA-CCAGCACATGCCCGAGCCCAGCAT
* * * * * *
16695429 GTGCTACGGCAACACTCAGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
389 GTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* *
16695494 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGACCAGAG
454 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* ** * *
16695559 GGGCGGGATGCTCAAGCCGGGGATCGACCGGGTCCCTCTCTGCGTGCTGTCGAT-CTG-T-----
519 GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGC
* * * *
16695617 AACCCTCGATCCGGTCTGATCTTAAACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAA
584 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * * * * *
16695682 TGAGCGAGCGGGCAGACGGGCACTACGTCAGCCAGAGAGGCGGGATGCGTAAGCCGTGGATTGAT
649 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGAT
* * * *
16695747 AGGGTGGTAGGTGGGTTTAGGCACATGTTCATATTTCTGCCATGCCAATGTCATTTTTTCTAGCA
714 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA-TTTTTCTGGCT
* *
16695812 TGTAAATTCATACGATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTTGTTTTC
778 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * **
16695877 TATATTTCACGATTTTTGAAACTTTTTAAGGTTCATGATTTTTTAAA
843 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * * * *
16695924 CTTTTTTCACAAAGGACTTTTGGCCCCAAACTTGCTAGAAAACGTGATCCCTGT-CTTTTGTTGG
1 ATTTTTTCA-GAAGGAGTTTTGGCCCCAAACTTGGTAG---ACGTGATCCTTGTATTTTTGTTGG
16695988 CATGCA-ATAAAACAATTCAGGCTAAAAACTCGAAAGTGTACAAGATTTTGTGACCATTTGAAAA
62 CATGCACA-AAAA-AATTCA-GCTAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTTGAAAA
*
16696052 AAGTGTCCCCATTTCAGTCACTTTAATGGCTACTGGC-GACAAACCTGTAAAATCTCAAATGCTC
123 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG-CAAACCTGTAAAATCTCAAATGCTC
* *
16696116 TTTAAGGAGGTGTGAGTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
187 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * *
16696181 GGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACTCCAATGCC
252 AGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
* ** * * * * *
16696246 GCCAATCAGGTTCTCCGATGATGGTGTCCCGGCGAAAAAAAATGCAGCACCAGCACATG-CCTAG
316 GTCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA-
* * *
16696310 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAAAGAACTCCGTATG
380 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
** * * ** *
16696375 CTTAGACTGCAAATGAACTCCGTATGCCTAAGTCAACCCACGGAATGAGCGTGTAGGCACTCAGC
445 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16696440 CGACCAGAGCGGCGGGATGCACAAGCCGAGGATCGGCCGGGT-CCCC-CT---T--TG-C-A---
510 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
16696493 TGCTACAGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATCAACTCCGTATACCTAAGCCAA
575 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
16696558 CCGACGAAATGAGCGAGG-GGACGAGCGGGCACTACACCGGCCAGAGAGGCGGGATGCGCAAGCC
640 CCGACGAAACGAGCG-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * * *
16696622 GTGGATCGATAGGGTGGTAGGTGAGTTTAGGCATAACTTCATATTTCTGCCATGCCAATGCAATT
704 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
*
16696687 TTTCTGGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
769 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * ** * *
16696752 CTCGTTTTCTTTTTTTCATGATTTTCAAAACTTTTTAAGGTTCGGGATTTTTTTAA
834 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* *
16696808 ATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTACACGTGATCCTTGTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * * *
16696873 CACAAAAAACTTCAGCTAAAAAGTTGAAGTGTACAAGATTTCGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
16696938 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
16697003 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
16697068 CGCACATCATGTGCGCACACCCCCCCCCGGCCACCCCCGATCGCCAGAACCCCAATGTCGTCGGT
261 CGCACATCATGTGCGCACA---CCCCCCGGCC-CCCCCGATCGTCGGAACCCCAATGCCGTCGGT
* **
16697133 CAGGTTCTCCGACGATGGTGTCCCGAAGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGC
322 CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
*
16697198 ATGTGCTGCCGCAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
387 ATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * *
16697263 TGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCAGGCGCTCAGCCGGCCAG
452 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * *
16697328 ATGGGCGGGATGCGCAAGTCGGGGATCGATCGGGTCCCCCTCTGCGTGCTG-CAAT-CTGCAG-C
517 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCC
* * *
16697390 GCAA-CCTCGGTCCGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGA
582 GCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * * * *
16697454 AACGGGCGGG-GGGACGGGCGAGCACCATGCCGACCAGAGAGGTGGGATGCGGAAGCCGTTGATC
647 AACGAGCGGGCGGG-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATC
* *
16697518 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCTTGCCAATGCCATTTTTTTGG
711 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
*
16697583 CTTGTAAATTCATACAATGGTCCCTTAAGCGTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
776 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * ** *
16697648 TCTATTTTTCACAATTTTTAAAACTTTTTAAGGTTCAAGATTTTTCAAA
841 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * *
16697697 ATTTTTTCAGCAGGAGTTTTGGCCCCAAACCTAGTAGACGTGATCCTTGTATTTTTGTTGGCAAG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
16697762 CACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * * *
16697827 CCATTCCATACGCTTTAATGGCTATTGGC-GACAAACCTGTAAAATCTCAAATGCTCTTTAAGGA
131 CCATTTCAGACACTTTAATGGCTACTGGCAG-CAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
16697891 GGTGTGAGTTCTCGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
195 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * **
16697956 TCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAATCA
260 TCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* * * * ** ** *
16698021 GGTTCTCCGATGATGGTGTCCC-AGTGATGAAAAATACTACACCAGCACATGCTTGGGCCCAGCA
324 GGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * *
16698085 TATGCTACCGCAACCCTCGATCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACT
388 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * *
16698150 GGGAATGAACTTCGTATGTCTAAGTCAACCCATGAAACAAGCGTGCGAGCGCTCAGCCGGCCAGA
453 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * *
16698215 GGGGCGAGATGCGCAAGTCAGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCAATCCTGCAGCCG
518 GGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
* * *
16698280 CAACCCTCGGTCCGGTTTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAA
583 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * *
16698345 ACGGGCGGG-GGGACGGGCGAGCACCATGCCGACCAGAGAGGCGGGATGCGCAAGCCGTTGATCG
648 ACGAGCGGGCGGG-CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
16698409 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTTTTTTGGC
712 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* *
16698474 TTGTAAATTCATAAAATGGTCCCTTAAGCGTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
777 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * ** *
16698539 CTATTTTTCACAATTTTTAAAACTTTTTAAGGTTCAAGATTTTTCAAA
842 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * *
16698587 ATTTTTTCAGCAGGAGTTTTGGCCCCAAACCTAGTAGACGTGATCCTTGTATTTTTGTTGGCAAG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
16698652 CACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
16698717 CCATTCCAGACGCTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
16698782 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTGCCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
*
16698847 CGCACATCATGTGCGCACACCCCCACCTCGG-CCCCCCGATCGTCGGAACCCCAATGCCATCGGT
261 CGCACATCATGTGCGCACA--CCC-CC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGT
* * ** ** *
16698911 AAGGTTCTCCGATGATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCTTGGGCCCAGC
322 CAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * *
16698976 ATATGCTACCGTAA-CCT---T-CG----G-TC-----C-----A-G---TCCG-AT-CTTAGAC
387 ATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
*
16699015 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAG
452 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * * * *
16699080 AGGGGCGGGATGCGCAAGCC-GGGATCGGCCGGGTCCCCCTCTGTGGGCTGTCGATCTTGCTTCT
517 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCC
* * * * ** * *
16699144 GCAACCCTCAGTCCGGTTTGATCTTAGACTGGGAATAAACTTTGTAAGCCTAAGCCAATCGACGA
582 GCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
16699209 AACGAGCAGACGTGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
647 AACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
16699274 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
712 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
* * *
16699339 TTGTAAATTCATACAATGGTCCCTAAAGCCTTCGTGTGAAGTTTCATGGCAAGATGACTCGTTTT
777 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
*
16699404 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
842 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * *
16699452 ATTTTTTCAGAAGTATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGTATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
16699517 CATAAAAAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
16699582 CCATTTCAGACACTTTAATGGCTACTGGCAGTAAACTTGTAAAATCTCAAATGCTCTTTAAAGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * *
16699647 GTTTAAAGTTCTTGAGGTTTGATGAAGGATAAGGGGGCCAATATAA-GGCCAAGTACCAGCACCC
196 GTGT-GAGTTCTCGAGGTTTGATGAGGGAT-AGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * *
16699711 ATCCGCACATC-TGTGAGCA-A-CCGCCGG-CTCCCAGAT-GT-GG-ACCCCATGATGCCGTCGG
259 AT-CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCA--ATGCCGTCGG
* * *
16699769 TCAGG--CTCCGAGCGAT-G-G--CCG-CG-TG-AAAATGTGGCACCAGCACATGCTCGAG-CCA
321 TCAGGTTCTCCGA-CGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* *
16699824 -CATGTGCT---G--A-CAT---T--AAT--GA--TT---C-GGG--T---CT--G-AT-C-TAG
385 GCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * *
16699859 GCTAGGAATGAACTCCGTATGTCTAAGTCAA-CCACGAAACGAGCGTGAC-GGCGCTCAGTCGG-
450 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG-CGGGCGCTCAGCCGGC
* * * * * * *
16699921 CA-ATGTGCGTGATGCTTC--G-C-GGGATC-GACGGGT-CCACTCTAGCGTGC-GTCGAT--TG
514 CAGAGGGGCGGGATGC-GCAAGCCGGGGATCGGTCGGGTCCCCCTCT-GCGTGCTGCCGATCCTG
* * * * *
16699976 CTG-CTCAA-CGTC-ATC-GGTTTGA-C-TAGACT-GAAATTGAACTCCGTATGCCTAAGCCAAC
577 CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAA-TGAACTCCGTATGCCTAAGCCAAC
* * * ** * * * **
16700034 TGATGAAACGAGCGGGAGGATGGGTGGGCACTACGCCAGCCAGAGAGGTGAAATGCGCAAGCCGT
641 CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
*
16700099 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCACTTT
706 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTT
*
16700164 TCTAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
771 TCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACT
* * * *
16700229 CGTTTTCTATTTTTCACGATTTTGGAAAATTTTTACGGTTCGAGAATTTTTAAA
836 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * *
16700283 ATTTTTTCAGTAGGAGTTTTGGCCCCAAACTTGGTAGACATTATCCTTTTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * *
16700348 CACAAAACAATTCAGCTACAAACTCGAAGTGTACAAGAGTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
16700413 CCATTCCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
16700478 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
** ** *
16700543 CTTACATCATGTGCGCACACCCCCCGGCCCCCCCCGATCGTCGGAACCCCAATATCGTCGGTCTG
261 CGCACATCATGTGCGCACACCCCCCGG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAG
* * * *
16700608 GTTCTCCGACGATGGTGTCTCGACGAAGAAAAATGGGGCACTAGCACATGCCTGAGCCCAGCATG
325 GTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * **
16700673 TGCTGCCGCAACACTCGGTCCGATCTGATCTTAGACTGAAAATGAACTCCGTATGCTTAGACTGG
390 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
16700738 GAATGAACTCCATATGCTTAAGTCAACCCATGAAACAAGTGTGCGGGTGCTCAGCCGGCAAGAGG
455 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * * * *
16700803 GGCGGGATGCGTAAGCCAGGGATCGGTTGGGTCCCCCTCCGCGTGCTGCTGATCTTGCTACCACA
520 GGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
** * *
16700868 ACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAAT
585 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * *
16700933 GA----GC-GGC---CGGGCACTACGTCGGCCAAAGAGGCGGGATGCCCAAGCCGTGGATCGATA
650 GAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATA
*
16700990 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTC
715 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTG
* *
16701055 TAAAAATTCATACAATGGTCCCTTAAGCCTTCTTGTGAAGTTTCATGGCAAGACCACTCGTTTTC
780 T--AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * *
16701120 TATTTTTCACGATTTTTGAAAATTTTTACAGTTTGGGATTTTTTTAA
843 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
16701167 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * *
16701232 CACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATCTAAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
16701297 CCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * * *
16701362 GCGTGAGTTCTCAAGGTTTGATGAAGGATAGGGGGCGAATATAAGGG-CAAGTACCAGCAACCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
*
16701426 TGCACATCATGTGCGCACACCCCCCGGCACCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAG
261 CGCACATCATGTGCGCACACCCCCCGGC-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAG
* * * *
16701491 GTTCTCC-AGCGATGGTGTCTC-AGGGAAGAGAAATGCGGCACCAGCACATGCCCGAGCACAGCA
325 GTTCTCCGA-CGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * * *
16701554 TCTGCTGCTGCAACCCTCAGTCCGGTTCAATCTTAGATTGGGAATGAACTCCGTATGCTTAGACT
388 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * * * * *
16701619 GGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACAAGTGTACGGGCACTCAACCGGCTA-A
453 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * *
16701683 TGGGGCAGGATGCGTAAGACGGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCT
518 -GGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCC
** * **
16701748 GCAACCCTCGGTCTGGTCCAATCTTAGACTAGGAATGAACTCCACATGCCTAAGCCAACCGACGA
582 GCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
16701813 AACGA------------GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
647 AACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCG
* *
16701866 ATAGGGTGGTAGGTGGGTGTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGC
712 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGC
*
16701931 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAAGGCAAGACGACTCGTTTT
777 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * * *
16701996 CTATTTTTCATGATTTTTGACACTTTTAACGGTTTGTGATTTTTTAAA
842 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * *
16702044 ATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTA-TTTTGTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
16702108 CACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
16702173 CCATTTCAGACACTTTCATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * * * *
16702238 GCGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTGCCCGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
** * * * * * *
16702303 CAAACATCATGTGTGAACTCCCCCCGACCCCCCCGATCGCCGGAACCCCAAT-CTGTCGGTCAGG
261 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
** * * *
16702367 TTCTCCGGTGATGGTGTCCCGACGAAGAAAAATACGGCACCAGCACATTCTCGAGCCCAGCATGT
326 TTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * * * *
16702432 GCTGCCGCAACCCTCGGTTCGGTCCAATCTTAGAATAGGAATGAATTCCGTAAGCTTAGACTGGG
391 GCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * ** *
16702497 AATGAACTCTGTATGCTTAAGTCAACCCACGAAACGAACGTGCGAGCGCTCAGCTAGCTAGAGGG
456 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * ** * * * *
16702562 GCGGGATGGGCAAGCCGGGGATC-GACTGGGTCCCCCTCTATGTGCTGTCGATGCTACTGCCACA
521 GCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCA
* * *
16702626 ACCCTTGGTCTGATCAT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAA
585 ACCCTCGGTCTGGTC-TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
16702690 CGA----GCAGGCGGGCGGGTACTACACCGGCCAGAGAGGCGGCGGGATGCTCAAGCCGTGGATC
649 CGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGA---GGCGGGATGCGCAAGCCGTGGATC
* * * *
16702751 GATAGGGTGGTAAGTGGGTTTAGGCACATCTTTATATTTCTGTCATGCCAATGCCATTTTTTTGG
711 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGG
* * * * *
16702816 CTTGTAAATTCATACAATGGTCCGTTAAGCCTTCGTGTAAAGTTTCATGGCAAGACCACTCTTTT
776 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * *
16702881 TCTATTTTTCATGATTTTTAAAACTTTTTACGGTTTGAGATTTTTTAAA
841 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* *
16702930 ATTTTTTCAGAAGGAAG-TTTGGCCCCAAACTTGGTAGACGTGATCTTTGTATTTTCGTTGGCAT
1 ATTTTTTCAGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* *
16702994 GCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAATTGAAAAAAGTGTC
65 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
16703059 CTCA-TTCTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
130 CCCATTTC-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
16703123 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCTCCC
194 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * * * *
16703188 ATCACACATCATGTGTGCACACCTCTC-GACCCCCCGATCGTCGGAACCCCAATCCCGTCGGTTA
259 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* * *
16703252 GGTTCTCCGACGATGGTGTCCC-AGTGAAGAAAAATACGGCACCAGCACATACCCGAGCCCAGCA
324 GGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * * * *
16703316 TGTGCTGCCGTAACCCTCAGTCTGGTCCAATCTTTGACTGGGAGTGAACTCCATATGCTTAGACT
388 TGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * *
16703381 AGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGCCAGCCAGA
453 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * * * * *
16703446 GCGGCGGGATTCACAAGCCGGGGATCGATCGGGTCCCTCTTTGCATGCTGCTGATCCTGCTACCG
518 GGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCG
* * * * *
16703511 TAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTGCATATGCCTAAGCCAACCGATGAA
583 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * **
16703576 TCGAGCGGGCGGGCTGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCACAAATCG
648 ---A-CGAGC--G--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
16703641 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCGTACCAATGCCATTT
705 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
16703706 TTCTGGCTTGTAAATTC--AC-AT-G--CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
770 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * ** ***
16703765 TCATTTTCTATTTTTCACCATTTTCAAAACTTTTTACGGTTCTAAATTTTTTAAA
835 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* ** *
16703820 ATTTTTTCAGAAGGTGTTTTGGCCCCAAACTTATTAGACGGGATCCTTGTATTTTTGTTGGCATG
1 ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * * *
16703885 TACAAAAAAACTCAGCTAAAAGCTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
66 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
16703950 TCATTTCAGACACTTTAATGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
131 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
16704015 GTGTGAGTTCTTGAGGTTTGATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
196 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* ** * ** *
16704080 CGCACATCATGTGCGCACACCCCCCCG-CCCCCCGATCACCGGAAGCCCAATGCCACCGATCAGG
261 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
16704144 TTCTC
326 TTCTC
16704149 AGGTAGCCCC
Statistics
Matches: 11991, Mismatches: 1294, Indels: 508
0.87 0.09 0.04
Matches are distributed among these distances:
829 21 0.00
830 52 0.00
831 431 0.04
832 7 0.00
833 7 0.00
834 9 0.00
835 17 0.00
836 9 0.00
837 17 0.00
838 1 0.00
839 12 0.00
840 12 0.00
841 9 0.00
842 2 0.00
843 33 0.00
844 10 0.00
845 36 0.00
846 34 0.00
847 4 0.00
848 1 0.00
849 8 0.00
850 4 0.00
851 25 0.00
852 1 0.00
853 1 0.00
854 4 0.00
856 3 0.00
857 13 0.00
858 7 0.00
859 15 0.00
860 12 0.00
861 1 0.00
862 2 0.00
863 1 0.00
864 1 0.00
865 491 0.04
866 137 0.01
867 24 0.00
868 4 0.00
869 2 0.00
871 2 0.00
872 3 0.00
873 30 0.00
874 32 0.00
875 304 0.03
876 206 0.02
877 194 0.02
878 185 0.02
879 125 0.01
880 572 0.05
881 884 0.07
882 729 0.06
883 422 0.04
884 451 0.04
885 184 0.02
886 539 0.04
887 944 0.08
888 1042 0.09
889 1508 0.13
890 1457 0.12
891 231 0.02
892 141 0.01
893 30 0.00
894 18 0.00
895 38 0.00
896 140 0.01
897 19 0.00
898 29 0.00
899 42 0.00
900 3 0.00
902 7 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (889 bp):
ATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
TTCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
GCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAA
CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
AGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAG
GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGT
AAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
Found at i:16691943 original size:26 final size:26
Alignment explanation
Indices: 16691914--16691966 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16691904 CCAATCTGAT
16691914 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16691940 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16691966 C
1 C
16691967 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16692834 original size:26 final size:26
Alignment explanation
Indices: 16692796--16692848 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16692786 CCAGTTTGAT
*
16692796 CTTAGATCAGGAATGAACTCTGTATG
1 CTTAGATCAGGAATGAACTCCGTATG
**
16692822 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATCAGGAATGAACTCCGTATG
16692848 C
1 C
16692849 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGATCAGGAATGAACTCCGTATG
Found at i:16693713 original size:26 final size:26
Alignment explanation
Indices: 16693684--16693736 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16693674 TTAGTTCGAT
*
16693684 CTTAGACTGGGAATTAACT-TCGTATG
1 CTTAGACTGGGAATGAACTCT-GTATG
16693710 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16693736 C
1 C
16693737 CTAAGTCAAT
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16695488 original size:26 final size:26
Alignment explanation
Indices: 16695459--16695511 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16695449 TCGGTCCGAT
16695459 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16695485 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16695511 C
1 C
16695512 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16696378 original size:26 final size:26
Alignment explanation
Indices: 16696349--16696401 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16696339 CCGGTCCAAT
*
16696349 CTTAGACTGGGAAA-GAACTCCGTATG
1 CTTAGACT-GCAAATGAACTCCGTATG
16696375 CTTAGACTGCAAATGAACTCCGTATG
1 CTTAGACTGCAAATGAACTCCGTATG
16696401 C
1 C
16696402 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 4 0.16
26 21 0.84
ACGTcount: A:0.30, C:0.23, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAGACTGCAAATGAACTCCGTATG
Found at i:16697259 original size:26 final size:26
Alignment explanation
Indices: 16697230--16697282 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16697220 CCGATCCGAT
16697230 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16697256 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16697282 C
1 C
16697283 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16698145 original size:26 final size:26
Alignment explanation
Indices: 16698116--16698167 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
16698106 CCGATCCGAT
16698116 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
16698142 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16698168 TCTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16700731 original size:26 final size:26
Alignment explanation
Indices: 16700702--16700757 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
16700692 CCGATCTGAT
*
16700702 CTTAGACTGAAAATGAACTCCGTATG
1 CTTAGACTGAAAATGAACTCCATATG
**
16700728 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGAAAATGAACTCCATATG
16700754 CTTA
1 CTTA
16700758 AGTCAACCCA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.32, C:0.20, G:0.20, T:0.29
Consensus pattern (26 bp):
CTTAGACTGAAAATGAACTCCATATG
Found at i:16701614 original size:26 final size:26
Alignment explanation
Indices: 16701585--16701637 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16701575 CCGGTTCAAT
*
16701585 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16701611 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16701637 C
1 C
16701638 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16702514 original size:26 final size:26
Alignment explanation
Indices: 16702460--16702515 Score: 67
Period size: 26 Copynumber: 2.2 Consensus size: 26
16702450 TCGGTCCAAT
*
16702460 CTTAGAATAGGAATGAATTCCGTAAG
1 CTTAGAATAGGAATGAACTCCGTAAG
* * * *
16702486 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGAATAGGAATGAACTCCGTAAG
16702512 CTTA
1 CTTA
16702516 AGTCAACCCA
Statistics
Matches: 25, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.32, C:0.14, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGAATAGGAATGAACTCCGTAAG
Found at i:16704223 original size:25 final size:26
Alignment explanation
Indices: 16704173--16704224 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
16704163 CCAGTCCGAT
**
16704173 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16704199 CTTAGACT-GGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
16704224 C
1 C
16704225 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 16 0.67
26 8 0.33
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16705965 original size:26 final size:26
Alignment explanation
Indices: 16705929--16705981 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16705919 CTGGTTTGAT
* **
16705929 CTTAGATTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16705955 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
16705981 C
1 C
16705982 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:16706826 original size:26 final size:26
Alignment explanation
Indices: 16706797--16706846 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
16706787 GTCCGATCTT
*
16706797 AGACTGGGAATGAACTCCATATGCTC
1 AGACTAGGAATGAACTCCATATGCTC
*
16706823 AGACTAGGAATGAACTCCTTATGC
1 AGACTAGGAATGAACTCCATATGC
16706847 CTAAGTCAAG
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.22, G:0.22, T:0.24
Consensus pattern (26 bp):
AGACTAGGAATGAACTCCATATGCTC
Found at i:16708591 original size:26 final size:26
Alignment explanation
Indices: 16708562--16708614 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16708552 CCGGTCTGAT
16708562 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16708588 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16708614 C
1 C
16708615 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16712635 original size:887 final size:890
Alignment explanation
Indices: 16704159--16718219 Score: 18112
Period size: 887 Copynumber: 15.9 Consensus size: 890
16704149 AGGTAGCCCC
* *
16704159 CGGTCCAGTCCGATCTTAGACTGGGAATGAACT-CTGTATGCTTAGACT-GGAATGAACTCCATA
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTAC-GTATGCTTAGACTGGGAATGAACTCCGTA
** * ** *
16704222 TGCCTAAGTCAACCCATAAAACGAGCGTGTC-GGCGCTCAGCCGGCCAAAGGGATGGGATGCGTA
65 TGCCTAAGTCAACCCACGAAACGAGCGTG-CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * * * ** * *
16704286 AGTCGAGGATCGATCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCGTAACACTC-GATCCG
129 AGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCG
* * *
16704350 G-TCTGATCTTAGATTGGGAATAAACTCCGTATGCCTAAGCCAACCAACGAAACGAGCGGGCGGG
193 GTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
* * * *
16704414 CGGGCAGACACTACGCCGGCCAGAGAGACGGGATGAGCAAGCCGTGGATCGATAGGGTGGTAGGT
257 CGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* *
16704479 GGGGTTTAGGGCACATCTTCA-ATTTCATGCCAATGCCAATGCCACTTTTTTTTGGCTTTTAAAT
322 -GGGTTTA-GGCACATCTTCATATTTC-TGCC-ATGCCAATGCCA--TTTTTCTGGCTTGTAAAT
* *
16704543 TCCATACAATGGT-CCTTAAGCCTTCGTGTG-AGTTTTCATGGCAAGACGACTCGTTTTTTATTT
381 T-CATACAATGGTCCCTTAAGCCTTCATGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTT
* * * *
16704606 TTCACGGTTTTTGAAACCTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
444 TTCATGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGC
* * *
16704671 CCCAAACTTGGTAGACGAT-ATCGTTATATTTTTGTTGGCATGCACAAAAATATTCAGCTAAAAA
509 CCCAAACTTGGTAGACG-TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
16704735 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
573 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
** * * * * *
16704800 TACTGATAGCAAACCTATACAATCTCAAATGCTCTTTACGAGGGTGTGAGTTCTCGAGGTTTGGT
638 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * **
16704865 GAGGGATAGGGGGCCAATATAAGGGCCCAGTACCAACACCCATCGCACATCATGTGCAAACA-CC
703 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * * *
16704929 CCCCGGCCCCCCCGATTGTCGGAACCCCAATGCCGTCGGTCAGGTTTTTCGGCAATGGTGTCCCG
768 CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCG
** * * * * * * *
16704994 GTGAAGAAAAATACAGCACCAGCACATGCTCGAGCTCAACATGTGCTACCACAACCCT
833 ACGAAGAAAAATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * *
16705052 CGGT-C--T--G------G--T-----T---C-A---AT-TTTAGACTGGGAACGAACTTCGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * **
16705091 GCGTAAGTTAACCCACGAAACGAGCGTGCGGGCGCTCATCCGACCAAAGGAACGGGATGCGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * * * * *
16705156 CCTGGGTTCGATCGAGTCCTCCTCTACGTGCTACCGATCTTGCTACTGCAACCCT-TGATCCGGT
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCGGT
* * * * *
16705220 CCGATCTTAGACT-GGAATGAACTCTGTATGCCTAAGCCAACTGACGAAACGAGCAGGCGGGCCG
195 TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * * *
16705284 ACGGGCACTACGTCGGCCAGAGAGGCAGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGG
260 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
16705349 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTCCTGGCTTGTAAATTCGTACAAT
325 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
* * *
16705414 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCATGACTTT
390 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
** ** **
16705479 CAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTTTCCCCAAACTTCT
455 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* * * * *
16705544 TAGACGCGATGCTTGTATTTTTGTTGGCATTCACAAAAAAATTCAACTAAAAACTCAAAGTGTAC
520 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * * *
16705609 AAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAGTAGCTACTGGCAGCAG
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
16705673 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAGGGATAGGGG
650 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
16705738 GCCAGA-ATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCGCACA-CCCCCTGACCCCC
715 GCCA-ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-GCCCC
* * * * * * * * *
16705801 CCTCGATCGCCGGAAGCCCAATGCCACCAGTCAGGTTCTCCGACGATGGTGTCTCGGCAAAGAGA
778 CC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAA
* * ** * *
16705866 AATGCGGCCCCAGCACATGCCCGAGCCCAGCATGTGCTATCGTATCCCT
842 AATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * ** * * * *
16705915 CAGTCTGGTTTGATCTTAGATTGGGAATTAACTCCGTATGCTTAGACTGGGAACGAACTCCGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * **
16705980 GCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAACCGGCCAGAGGGGCAAGATGCGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * *
16706045 CCAGGGATTGGTCGGGT--CCC-C--C-T-CTG-C-A---TGCTGCCGTAACCCTCGGTCTGGTC
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
* * ** * * *
16706098 CGATCTTACACTGTGAACAAACTCTGTATACCTAAGCCAACCGACGAAACGAGCGGGCGGGCGAG
196 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
** * * *
16706163 CGGGCACTTTGCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATCGATAGGGTGGTCGGTGGGT
261 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
16706228 TTAGTCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATG
326 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
* *
16706293 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
391 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * * * *
16706358 AAAACTTTTTACGGTTCGAGATATTTTAAAATTTTTTCAGAAGGTGTTTTGGTCCCAAACTTGGT
456 GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
16706423 AGACATGATCCTTGTATTTTTGTTGGCTTGCAAAAAAAAAATTCAGCTAAAAACTCGAAGCGTGC
521 AGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
16706488 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAAAT-GCTACTGGCAGCA
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT-AATGGCTACTGGCAGCA
*
16706552 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGG
649 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
16706617 AGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCACACA-CCCCCCGGCCCCC
714 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* *
16706681 CCGGATCGTCGGAACCCCAATGCCGTCGATCAGGTTCT-C--CGA-----T------GAAGAAAA
779 CC-GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAA
* * *
16706732 ATGCGGCACCAGCACATGCCCGAGCCAAGCATGTGCTTCCGCAACCCT
843 ATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * * *
16706780 CGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCATATGCTCAGACTAGGAATGAACTCCTTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * * *
16706845 GCCTAAGTCAAGCCACGAAATGAACGTGCGGGTGCTTAGCCGGACAGAGGGACGGGATGCGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * * * *
16706910 CCAGAGATCGATCGGGTCCCCCTCTATGTGCTGCCGATCCTACAGCCGCAACCCGCGGTCTGGTT
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
* * * *
16706975 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCGACCGACAAAACGAGTGGGCGGGTGGG
196 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* *
16707040 CGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGT
261 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
16707105 TTAGGCACATCTTCATATTTCTACCTTGCCAATGCCATTTCTCTGGCTTGTAAATTCATACAATG
326 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
* * *
16707170 GTCCCTTAAGCCTTCATTTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGAATTTT
391 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * * *
16707235 GAGACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGA
456 GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGT
* * * *
16707300 AGATGTGATCCTTGTATTTTT-TTTGCATGGACAAAAAAATTCAGCTAAAAACTCGAAATGTACA
521 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
16707364 AGATTTTGTGACCATTTGAAAAATGTGTCGCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
586 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
16707429 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGG
651 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** * * *
16707494 AAAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCCCACCCCTCCGG-CCCCCC
716 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
* * * * * *
16707558 GATCGTCGGAACCCAAATGTCGCCGGTCAGGTTCTCCGGTGATGGTGTCCGGGCGAAGAAAAATA
781 GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATG
* * * * * *
16707623 CGGCACCAGCATATGCCCTAGCCCAGCATGTGCTGTCGGAACCTT
846 CCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* ** * * *
16707668 TGGTCTTGTCCGAACCTAGACTGGGAATGAATTCTA--TATGCTTAGACTGGGAATGAACTACGT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAA--CTACGTATGCTTAGACTGGGAATGAACTCCGT
* * * * * *
16707731 ATGCCTAAGTCAACCCACGAAATGTGCGTGCGGGCGCTCAGCCTGTCATAGGGGCGGGATACGCA
64 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * * *
16707796 AGTCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCTGCAACCCTCAGTCCGG
129 AGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGG
* *
16707861 -TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAAC-A-------AGC
194 TTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
* *
16707917 GGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTG
258 GGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* *
16707982 GGTTTAGGCATATCTTCATATTTCTGCCATGCCAATGCCATTTTTTTGGCTTGTAAATTCATACA
323 GGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACA
* * *
16708047 ATGGTCCCTTAAGCCTTCATGTGAAGCTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGA-T
388 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATT
* *
16708111 TTTGAAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCAAAC
453 TTTG-AAACTTTTT-ACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAAC
* * *
16708175 TTGGTAGACGTGATTCTTTTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGT
516 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
16708240 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
581 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
16708305 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCATGAGGGATA
646 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
16708370 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGCACA-CCCCCC-GCC
711 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC
* * * * *
16708433 CCCCTGATCATCGGAATCCCAATGTCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAA
776 CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAA
** ** * *
16708498 AAATGAGGCACCAGCACATGCTTGAGCCCAGCATGTGCTGCGGCAACCCC
841 AAATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * *
16708548 CGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * *
16708613 GCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGTTGTGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * * * *
16708678 CCGAGGATCGGTCGGGTCCCTCTCTACGTGTTACGGATCCTGCTGCCGCAACCTTCGGTCTGG-A
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
** *
16708742 CTGATCTTAGACTACGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA--------GCGG
196 C-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * * * *
16708799 GCGGGCACAACGCCAGCTAGAGAGGCGAGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGG
260 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
16708864 TTTAGGCACATCTTCATATTTCTGCCATTCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
325 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
* *
16708929 GGTCCCTTAAGCCTTCATATGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTT
390 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
** * *
16708994 CAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTCT-TCCCCAAACTTC
455 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTT-TGGCCCCAAACTTG
* * * * *
16709058 TTAGACGTGATGCTTGTATTTTTGTTGGCATTCACAAAAACATTCAGCTAAAAACTCGAAGCGTA
519 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * *
16709123 CAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAGTAGCTACTGGCAGCA
584 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* ** *
16709187 AACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTACGAGTTCTCGAGGTTTGATGAGAGATAGGG
649 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
16709252 GGCCAATATAAGGGCCAAGTATCAGCACCCATTGCACATTATGTGCGCACACCCCCCACCGCCCC
714 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CCGGCCC
* ** * * *
16709317 CCCCGATCGCCGGAACCCCAATGCCGCTAGTCAGGTTCTCCGACAATGGTGTCCCGATGAAGAAA
777 CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAA
* * * *
16709382 AAT-ACGACACCAGCACATGCCCAAGCCCAGCAAGTGCTGCCGTAACCCT
842 AATGCCG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* *** * * *
16709431 TGGTCCAACCCGATCTTAGA-TCGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTG
1 CGGTCCGGTCCGATCTTAGACT-GGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTA
* * * **
16709495 TGCCTAAGTCAACCCACGAAATGAGCGTGTGGGTGCTCAGCCGGCCAGAGGGGTAGGATGCGCAA
65 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* ** * * ** * * * ** *
16709560 GCCAGGGATCGACCAGGTCCCTCTCTACGTGCTATCGATCCTACCGCCACAACCCTTGGTTCGGT
130 GCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
*
16709625 TCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
195 TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * * *
16709690 GCGGGTACTACGTCGGCCAGAGAGG-GGGATGCGAAAGCCGTGGATCGATCGGGTGGTAGGTGGG
260 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
16709754 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGGCATTTTTCTGGCTTGTAAATTCATACAAT
325 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
*
16709819 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTT
390 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
*
16709884 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGCAGTTTTGGCCCCAAACTTGG
455 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
*
16709949 TAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
520 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
16710014 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAA
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
16710079 ACCTATAAAATCTCAAATGCTGTTTAAGGGGGTGTGAGTTCTCAAGGTTAGATGAGGGATAGGGG
650 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * *
16710144 GCCAATATGAGGGCCAAGTACTAGCACCCATCGCACATCATATGCACACA-CCCCTC-GCCCCCC
715 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC
* * * * *
16710207 CGATCGTCGGAACCCTAATGCCGCCGGTTAGGTTCTCTGACGATGGTGTCCCAACGAAGAAAAAT
780 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAAT
* * *
16710272 ACGGCA-CAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAA----
845 GCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * **
16710313 ----CC-AT-CGATC-----C--GG--T---C-A-G-AT-CTTAGACTAGGAATGAACTTTGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * *
16710356 GCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCAGGATGCACAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * *
16710421 CCGGGGATCGG-CTGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGTCGCAATCCTCGGTCTGAT
131 CCGGGGATCGGTC-GGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * * * *
16710485 CCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAACGAGCGGTGGGGGCA
195 TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG-GCGGGCG
* * * * * * *
16710550 GGCAGGCACAACGCCGGCCAGAGAGGCAGGATGCGTAAGTCGTTGATCGATAGGGTGGTAGGAGG
259 GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
16710615 GTTTAGGCACATCTTCATATTTTTGCCATGCCAATACCATTTTTCTGGCTTGTAAATTAATACAA
324 GTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
*
16710680 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTATATTTTTCATGATTT
389 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
** *
16710745 TCAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
454 TTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
* * * * *
16710810 GTAGACGTAATCCTTGTATTTTTTTTTGGCATGCACAAAAAACTTCACCTAAAAACTAGAAGTGT
519 GTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* * *
16710875 ACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATAGCTACTGGCAGC
583 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
16710940 AAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGG
648 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
**
16711005 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCAACCCC
713 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC
** * * *
16711069 CCCGATCACCGAAACCTCAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGTCCCGACGAAGAAAA
778 CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAA
* * * * *
16711134 ATGCGGCACCAGCACGTGCCCGAGCCCAGCTTGTGCTGTCGCAACCTT
843 ATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * *
16711182 CGGTCCGGTCCGGTCTTACACTGGGAATGAACTACGTATGTTTAAACTGGGAATGAACTCCGTGT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
16711247 GCCTAAGTCAACGCACGGAACGAGCATGAGGGCTCTCAGCCGACCAGAGGGGCGGGATGCGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * * * *
16711312 TCAGGGATCGGTCGGGTCCCGCTCTACGTGTTGCCGATCCTGCTGCTGCAACCATCGGCCCAGTT
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
* ** *
16711377 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTAACGAAACGAGCGGGCGAGCGGG
196 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* * * *
16711442 CAGGCACTACGCCGGCCAGAGAAG-GGGATGCGCAAGCCGTGGATCGGTAGGGTAGTAGGTGGGT
261 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
16711506 TTAGGCACATCCTCATATTTTTGCTATGCCAATACCATTTTTCTGGCTTGTAAATTCATACAATG
326 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
*
16711571 GTCCCTTAAGCCTTCATGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
391 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* **
16711636 GAAACTTTTTACGATTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGT
456 GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
16711701 AGACATGATCCTTGTATTTTTGTTGGCGTGCATAAAAATATTCAGCTAAAAAATCGAAGTGTACA
521 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
16711766 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTACAGACACTTTATTGGCTACTGGCAGCAAA
586 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * ** *
16711831 CCTGTAAAATCTCAAATGCACTTTAAGGGGGTGCGAGTTTTCGAGGTTTGATTTGGGATAGAGGG
651 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * *
16711896 CCAATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGCGTGCACACCCCCCCGGCCACCCC
716 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
* * *
16711961 GATCGCCGGAACCCCAATGCCCCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATA
781 GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATG
* *
16712026 CCGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCACAACCCT
846 CCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * ** *
16712071 CGGTCCAGTCCGATCTTAGATTGGGAATGAACTACGTATGCTTAAACTTGGAATGAACTTTGTGT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * *
16712136 GCCTAAGTCAACCCACGAAACGAGCGTGCGAGAGCTCAGTCGGCCAGAGGGGTGGGATGCACAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * *
16712201 CCGAGGATCGGTCAGGTCCCCCTTTACGTGCTACCGATCCTGCTGCCGCAACCCTCAGCCCGGTT
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
* * * * *
16712266 CGATCTTAGACTGGGAATGAACTCCATATGCCTAAG-CAAACAACGAAATGAGCGGGTGGGCGGG
196 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* * *
16712330 CGGGCACTACGCCGGCCAGAGAGG-GGGATGCGAAAGCCGTGAATC-AGTAGAGTGGTAGG-GGG
261 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA-TAGGGTGGTAGGTGGG
* ** *
16712392 TTTAGGCACATCTTCATATTTCTACGGTGCCAGTGCCATTTTTCTGGCTTGTAAATTCATACAAT
325 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
16712457 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
390 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* *
16712522 TGAAACTTTTTACGGTTTGGGATTTTTTCAAATTTTTTTAGAAGGAGTTTTGGCCCCAAACTTGG
455 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
16712587 TAGACATGATCCTTGTATTTTTATTGGCATGCATAAAAATATTCAGCTAAAAACTCGAAGTGTAC
520 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* **
16712652 AAGATTTTGTGACCATTTGAAAAAATTGTCCCCATCACAGACACTTTAATGGCTACTGGCAGCAA
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
16712717 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG-GGAGATAGGG
650 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG-GATAGGG
* * *
16712781 GGCCAATATAAGGGCCCAGTACCAGCACCCATTGCAAATCATGTGCGCACACCCCCCCGAG-CCC
714 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-GCCCC
* * *
16712845 CCCGATCGTCGGAACCCCAATGCCCCCGATCAGGTTCTCCAGCGATGGTGTCCCGACGAAGAAAA
778 CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAA
* * * * ** * * *
16712910 ATACGGCACCAACACATGCCTGATTCCAACATGTACTGCCACAACCCT
843 ATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * *
16712958 CGGTCCGGTCTGATCTTAGACTGGGAATGAACTACGTATGCTTAAACTAGGAATGAACTCCGTGT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
16713023 GCCTAGGTTAACCTACGAAACGAGCGTACGGGCGTTCAGCCGGCCAGAGGGGCGAGATGCGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * *
16713088 CCGGGGATCGGCCAGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAG-AGCAACCATCAATCC-GA
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCT-GCCGCAACCCTCAGTCCGGT
* * * * *
16713151 TCTGATCTTAGACTGGGAATGAACTACGTATCCCCAAGCCAATCGATGAAACGAGCGGGCGGGCG
195 TC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
* ** *
16713216 AGCGGGCACTACGCCGGCCAGAGAGGCGGGATATGCAAGCCGTGGATCAATAGGGTGGTAGGTGG
259 GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * * * * * *
16713281 GTTTAGGCACATCTTCATAATTCTACCGTGACAATGCCTTTTTTTTGGCTTGTATATTAATACAA
324 GTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
* * *
16713346 TGGTCCCTTATGCCTTCATGTGAAGTTTCATGGAAAGACGACTCGTTTTCTATTTTTCATAATTT
389 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
* * * **
16713411 TT-AAAATGTTTTACGGTTCGGGATTTTTTAAAATTCTTTCAGAATTAGTTTTGGCCCCAAACTT
454 TTGAAACT-TTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTT
* * * * *
16713475 TGTAGACGTGATCCTTGCATTTTTGTTGGCATGCACAAAAACATTCAGCAAAAAACTTGAAGTGT
518 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* *
16713540 ACAAGATTTTGTGACCATTTGAAAAAAGTCTCCCCAATTCAGACACTTTAATGGCTACTGGCAGC
583 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
16713605 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
648 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* *
16713670 GTGCTAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCC
713 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC
* * * * * * *
16713733 CCTGATTGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCTGGCGATCGTGTCTCGACGAAGAAAA
778 CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAA
* * * *
16713798 ATGCAGCACCAGCACATGCTCGAGCCCAGCATGTGCTACCGTAACCCT
843 ATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * * *
16713846 CGATCCGGT-CGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGTACTCTGTAC
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
** * * *
16713910 GCCTAAGTCAACCCATAAAACGAGCATGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCACAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * *
16713975 TCGGAGATCAGTCGGGTCCCCCTCTGCGTGCTGTCGGTCCTGCTGCCGCAACCCTCAGTTCGG-T
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
* ** ** * * * *
16714039 CTGATCTTAGATTGCTAATGAACTTTGTATGCCTAAGCCAACCGACGAAATGAGTGGGCGAGCGT
196 C-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* *
16714104 GCGGGCACTACGCCAGCCAGAGAAGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
260 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
16714169 TTTTGGCACATCTTCATATTTCTGCCATGCTAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
325 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
*
16714234 GGTCCCTTAAGCCTTCATGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
390 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
** * * *
16714299 CAAAACATTTTACGGTTTGGGATTTTTTCAAATTTTTTCAGAAGCAGTTTTGGCCCCAAACTTGG
455 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
16714364 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
520 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
16714429 AAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
16714494 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
650 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
16714559 GCCAATATAAGGACCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCCC
715 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC
* * * *
16714624 CGATCGTCGGAACCCCGATGCCGCAGGTCAGGTTCTCCGACGATGGTGTCCCAACGAAGAAAAAT
780 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAAT
** *
16714689 G-CGACACCAGCACATGCCCGAGCCCAGCATGTGCTATCGTAACCCT
845 GCCG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * **
16714735 CGGTCTGGTACGATCTTAGACTGGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTCCGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* *
16714800 GCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * ** * * * *
16714865 CCGGGGATCGATCGGGTCCCTCTCTGTGTGCTGTCGATCCTGCTGCCACAACCC-CTGGTCTGGT
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTC-AGTCCGGT
* * * * *
16714929 ACGATCTTAGACTGGGAATGAACTCCGTATGCCTCAGCCAACTGACGAATCGA----GCGGGCAG
195 TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
16714990 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
260 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
16715055 TTTAGGCACATCTTCATATTTCTGCCATGGCAATGCCATTTTTCTGGCTTGTACATTCATACAAT
325 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
*
16715120 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTT
390 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* * ** *
16715184 TCAAAATTTTTCATAGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCGAACTTG
455 TGAAACTTTTT-ACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
* * * *
16715249 GTAGACGTGATCTTTGTATTTTTTTTGGCATTCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
519 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
*
16715314 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCA
584 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
16715379 AACTTGTAAAATCTCAAAGGCACTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
649 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
16715444 GGCCAATATAAGGGCCAAGCACCAACACCCATCGCACATCTTGGGCGCACA-CCCCCCGGCCCCC
714 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* * * * *
16715508 CCGATCGTCGGAACCCCAATGTCGTCGGTCAAGTTCTCCGACGATGGTGTCCCGGCGAAGAAAAA
779 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAA
* *
16715573 TGCGGCACCAGCACATGCCC-AGGCCCAGCATGTGCAGCCGCAACCCT
844 TGCCGCACCAGCACATGCCCGA-GCCCAGCATGTGCTGCCGCAACCCT
* * * *
16715620 CGGTCTGATCCGATCTTAGAGTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
** * * *
16715685 GCCTAAGTCAACCCATAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGAGCGGGATGCACAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * * * * * * *
16715750 CCGGGCATCGATCGGGTCCCCCTCTATGAGCTGTCGATCCTGCTGCTGCAACACTCGGTCCGGTC
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
* ** * *
16715815 CAATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGG
196 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* * * * ** *
16715880 CGGGCACTACTCCGGCCAGAGAGGTGGGATGCGCAAGCCTTGGATCGATAGAGTTTTAGGTGGAT
261 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
** * *
16715945 TTAGTTACATCTTCACATTTTTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
326 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
*
16716010 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
391 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * * * *
16716075 AAAACTTTTTACGGTTCGAGATTTTCTAAAATTTTTTCAAAAGGAGTTTTGGCCCCAAATTTGGT
456 GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGT
* * *
16716140 AGAAGTGATCCTCGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
521 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
16716205 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
586 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * *
16716270 CCTGCAAAGTCTCAAATGCTCTTTAAGGGGGTTTGCGTTCTCGAGGTTTGATGAGGGATAGGGGG
651 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
16716335 CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA--CCCCCGGCCCCCCC
716 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
* * * *
16716398 GATCGTCGGAACCCTAATGCCACCGATCAGGTTCTCTGGCGATGGTGTCCCGACGAAGAAAAAT-
781 GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATG
* * *
16716462 ACGTCACAAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCT
846 CCG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * *
16716508 CGGTCCGATCCGATCTTAGACTGGGAATGAACTTCATATGCTTAGACTGGGAATGAACTCCGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * *
16716573 GCCAAAGTCAACCCACGTAACGAGCGTGCGGGTGCTCAACCGGGCAGA-TGGCGGGATGCGCAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* ** * * * *
16716637 TCGGGGATCGACCGGGTCCCCTTCTATGTGCTGCCGATCCTGCTGCCGCAACCCTCAATTCGGTT
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
* * * ** *
16716702 CAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-TAAA--A-TGAACGGGTGGG
196 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
* * *
16716763 CGGGCACTACGCCGACCAGACATGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
261 CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
16716828 TTAGGTACATCTTCATATTTTTGCCAAGCCAATGCCATTTTTCTGGTTTGTAAATTCATACAATG
326 TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
16716893 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
391 GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* ** * *
16716958 GAAACTTTTTAC-TTTTCAAGATTTATTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTCG
456 GAAACTTTTTACGGTTT-GGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* * *
16717022 TAGATGTGATCCTTGTATTTTTGTTGGCGTGCACAAAACAATTCAGCTAAAAACTCGAAGTGTAC
520 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * * *
16717087 AGGATTTTCTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAAAGGCTACTGGCAGCAA
585 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
16717152 ACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGG
650 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * * * * *
16717217 GCCATTATTAGAGCCAAGTACCAGCACCCGTCACACATCATGTGTGCACACCCCCCACCCGACCC
715 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CCGGCCCC
** * * * **
16717282 CCCGATCACCGGAACCACAATGCCGCCGGTTAGGTTCTCCAGCGATGGTGTCCCGGTGAAGAAAA
778 CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAA
** * *
16717347 ATGCATCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCACAA-CC-
843 ATGCCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
*
16717393 C--T----T-CG-TC-----C---G-AT---C--CG-AT-CTTAGACTGGGAATGAAGTCCGTAT
1 CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * *
16717434 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAGGGGCAGGATGCGTAAG
66 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * * *
16717499 TCGGGGATCGATCGGGTCCCCCTCTTCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GATTCGGT
131 CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCGGT
* * ** * * *
16717563 CCGATCATAGACTGGGAATGAACTCCGTATGCCTTCGCCAACCGACGAAACGAGTGGGCCGACGG
195 TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
* * * * *
16717628 GCGGGCATTATGCCGGTCAGAGAGGCGGGATGCGTAAACCGTGGATCGATAGGGTGGTAGGTGGG
260 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
16717693 TTTAGGCAAATCTTTCGTATTTCTG-CACGGCTCAATGCGCCATTTTT-TGGCTTGTAAATTCAA
325 TTTAGGCACATC-TTCATATTTCTGCCA-TGC-CAAT--GCCATTTTTCTGGCTTGTAAATTC-A
*
16717756 TAGCAGTGGTCCCTTAAGCCTTCAATTGTGAAGTTTCATGGCAAGACGGACTCGTTTTCCTA-TT
384 TA-CAATGGTCCCTTAAGCCTTC-A-TGTGAAGTTTCATGGCAAGAC-GACTCGTTTT-CTATTT
* * * *
16717820 TTAATGA-TTTTGAAACTTTTTACGGTTTCAGAATTTTTGTTTAAATTTTTTCAGAAGGAGTTTT
444 TTCATGATTTTTGAAACTTTTTACGGTTT-GGGA-TTTT-TTAAAATTTTTTCAGAAGGAGTTTT
* * * * * *
16717884 GCCCCCAAACTATGGCAGACATGATCTTTCGGTAATTTTTCTTGGCATGCAACAAAAAAATTTAG
506 GGCCCCAAACT-TGGTAGACGTGATCCTT--GT-ATTTTTGTTGGCATGC-ACAAAAAAATTCAG
* *
16717949 CTTAAAAACTCGAAAGTGTACAAAGA-TTTGTGACCCAATTTCAAAAAATGTGACCCCATGTTCA
566 C-TAAAAACTCG-AAGTGTAC-AAGATTTTGTGA-CC-ATTTGAAAAAA-GTGTCCCCAT-TTCA
*
16718013 GACACATTAAGTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
624 GACACTTTAA-TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
16718078 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
688 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* ** * *
16718143 CATGTGCGCACA--CTCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCTGATCAGGTTCTCC
753 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
**
16718206 AACGATGGTGTCCC
818 GGCGATGGTGTCCC
16718220 AATCCGGTCC
Statistics
Matches: 11556, Mismatches: 1403, Indels: 427
0.86 0.10 0.03
Matches are distributed among these distances:
859 1 0.00
860 182 0.02
861 270 0.02
862 538 0.05
863 312 0.03
864 79 0.01
865 218 0.02
866 88 0.01
867 123 0.01
868 136 0.01
869 17 0.00
870 12 0.00
871 21 0.00
872 6 0.00
873 40 0.00
874 61 0.01
875 211 0.02
876 56 0.00
877 375 0.03
878 313 0.03
879 241 0.02
880 1048 0.09
881 236 0.02
882 23 0.00
883 789 0.07
884 66 0.01
885 348 0.03
886 524 0.05
887 1667 0.14
888 1026 0.09
889 1240 0.11
890 923 0.08
891 360 0.03
892 2 0.00
893 4 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
CGGTCCGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
CCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGTT
CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
CGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATG
GTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
GAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGT
AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGACGAAGAAAAATG
CCGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
Found at i:16714799 original size:26 final size:26
Alignment explanation
Indices: 16714749--16714801 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16714739 CTGGTACGAT
**
16714749 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16714775 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16714801 C
1 C
16714802 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16715663 original size:26 final size:26
Alignment explanation
Indices: 16715634--16715686 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16715624 CTGATCCGAT
*
16715634 CTTAGAGTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16715660 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16715686 C
1 C
16715687 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16716573 original size:26 final size:26
Alignment explanation
Indices: 16716522--16716574 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16716512 CCGATCCGAT
*
16716522 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
16716548 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16716574 C
1 C
16716575 CAAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16716992 original size:26 final size:26
Alignment explanation
Indices: 16716944--16716993 Score: 66
Period size: 26 Copynumber: 1.9 Consensus size: 26
16716934 CGTTTTCTAT
* *
16716944 TTTTCATGATTTTTGAAACTTTTTAC
1 TTTTCAAGATTTTTGAAAATTTTTAC
16716970 TTTTCAAGATTTATT-AAAATTTTT
1 TTTTCAAGATTT-TTGAAAATTTTT
16716994 TCAGAAGGAG
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
26 19 0.90
27 2 0.10
ACGTcount: A:0.28, C:0.08, G:0.06, T:0.58
Consensus pattern (26 bp):
TTTTCAAGATTTTTGAAAATTTTTAC
Found at i:16720030 original size:26 final size:26
Alignment explanation
Indices: 16720001--16720053 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16719991 CCAGTCCGAT
16720001 CTTACACTGAGAATGAAATCCGTATG
1 CTTACACTGAGAATGAAATCCGTATG
* * *
16720027 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGAGAATGAAATCCGTATG
16720053 C
1 C
16720054 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTACACTGAGAATGAAATCCGTATG
Found at i:16720781 original size:889 final size:888
Alignment explanation
Indices: 16718222--16726161 Score: 10330
Period size: 880 Copynumber: 9.0 Consensus size: 888
16718212 GGTGTCCCAA
* *
16718222 TCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * *
16718287 TAACTCAACCCACGAAACCAGCGTACGGGTGCTCAGCCGACCAGA-GGGCGGGATGCGCAAGCCG
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAG-CG
** * * * * * *
16718351 GGGATCGACCAAGTTCTCATGTGTGTGCTATCGATCCTACTGCCGCAACCCTCGG-TCTGGTCTG
130 GGGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTC-GGTCTG
* ** * * *
16718415 ACCTTAGACTGGGAACAAACTCCATATGCCTAAGCCAACCGATGAAACGAGCAGGCGGGCGGGC-
194 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCA
* * *
16718479 GAGTACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTT
259 G-GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
*
16718544 TAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGG
323 TAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGG
** * * **
16718609 TTTCTTAAGCCTTCATGTGAAGTTTCATGGCGAGACGACTCGTTTTTTATTTTTCACGATTTTCA
388 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * *
16718674 AAACTTTTTAAGGTTCAGGATTTTTTTAAATTTTTTCAGATGGATTTTTGGTCCCAAACTTGGTA
453 AAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
16718739 GACGTGATCCCTGTATTTTTGTTGGCATGCACAAAAAACTTTAGCTAAAAACTCGAAGTGTACAA
518 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * *
16718804 GATTTTATGACCATTTGAAAACAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAAC
583 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* *
16718869 CTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGCTTTGATGAGGGATAGGGGGC
648 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
16718934 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACGCCCCGGCCCCCCCGA
713 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGA
* * *
16718999 TAGTCGGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGCG
778 TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATGCG
* *
16719064 GTACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGG
843 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* ** * * * *
16719110 TCTGGTTTGATCTTAGATTGGAAATGAACTTCGTATGCTTAGACAGGGAATGAACTCCGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * *
16719175 TAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGAT-CACAAGCTG
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGC-G
* ** * * * * * *
16719239 AGGATCGGTCAGGTCCCACTTTGCGTGCTGCCGATCCTACTGCCACAACCCTC-GATCAGGTCCG
130 GGGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTC-GGTCTG
* * * * * * *
16719303 ATCTTAGACTAGGAATGAACTCCGTATGCTTAAGCCAACCGATGAAACGAGCGGGCAGACAGGCG
194 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCA
* * * *
16719368 GGCACTACACCGGCCAGAGAGCCGGGATGCGCAACCCGCGGATCGATAGGGTGGTAGGTGGGTTT
259 GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * * *
16719433 AGGCATATCTTCATATTTCTACCACGCCAATGCCATTTTTCTGGCTTGCAAATTCATACAATGTT
324 AGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGT
* **
16719498 CCCATAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAA
389 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
* ** * *
16719563 AACTTTTTAAGGTTC--GA--CATT----TTTTTTAAAAAGGAGTTTTGGCCCCAAACTTGGTAG
454 AACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAG
* *
16719620 ACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAG
519 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
16719685 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACAGGCAGAAAACC
584 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
*
16719750 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCC
649 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * * *
16719815 AATATAATGGCCAAGTACCAGCACCTATTGCATATCATGCGCGCACACCCCCCGGCCCCCCCGAT
714 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
* * * *
16719880 TGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGCGTCCC-AGCGAAGAAAAATGCG
779 CGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGA-TGAAGAAAAATGCG
* * *
16719944 ACACCAGCACATGCCCGAGCCCAGCATGTGTTGTCGCAACCCTCGG
843 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * *
16719990 TCCAGTCCGATCTTACACTGAGAATGAAATCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * *
16720055 TAAGTTAACTCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGAGGCGGGATGCGCAAGACA
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAG-CG
* *
16720120 GGGATCGGCCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGGAACCCTCGGTTCGGT-TCG
130 GGGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTCGGTCT-G
* * *
16720184 GTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAACGAGCGGGCGGGTGGGCA
194 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCA
* * * * *
16720249 AGCACTACGCCGCCCAAAGAGGCGGGAAGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGATTT
259 GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * ** *
16720314 AGGCACAACTTCATATATCTGCTGTGCCAATGCCATTTTTCTAGCTTGTAAATTCATACAATGGT
324 AGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGT
* *
16720379 CCCTTAAGCCTTCATGTGAAGTTTCTTGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGA
389 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
* * * *
16720444 AACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGCA-TTTTTGCCCTAAACTTGGTA
454 AACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGG-AGTTTTGGCCCCAAACTTGGTA
* * *
16720508 GACATGATCCTTGTTTTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
518 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
16720573 GATTTTGTGACCATTGGAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAAC
583 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
16720638 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGAT-ATGGGATAGGGGG
648 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGGATAGGGGG
*
16720702 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGCCCCCCCG
712 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* * * *
16720767 ATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTTCGACGATGGTGTCTCGACGAAGAAAAATGT
777 ATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATGC
** *
16720832 GGCACCAGCACATGCCCGAGCCCAAAATGTGCTGCCGGAA-CC-C--
842 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
*
16720875 T-C-G---G----T---CT-GG--T---CT--G-AT-CTTAGACTGGGAATGAACTCTGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * * *
16720918 TAGGTCAACCCACGAAACAAGCGTGCGGTCGCTTAGCTGGCCAGAGGGGCGGGATGCGTAAGTCG
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAG-CG
* * * * * * * * * * *
16720983 GGGATCAATCGGGTCCCCCTCTGCGTGCTGCCAATCCT-GTAGCTGCAACCCTTGATCCGGTCTA
130 GGGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACT-GCCGCAACCCTCGGTTCGGTCTG
* * * * * * * **
16721047 ATCTTAGACTAGGAATGAAATCTGTATGCCTAAGCCAACTGACGAAACGACCGGACGGGCGAGTG
194 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCA
* * *
16721112 GGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTT
259 GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
16721177 TGGCACATCTTCATATTTCTGTCATGCCAATGTCATTTTTCTGGCTTGTAAATTCATACAATGGT
324 AGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGT
* * *
16721242 CCCTTAAGCCTTCATGTTAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATCTTTGA
389 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
* * * *
16721307 AA-ATTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGACTTTTGGCCCCGAACTTGGTAG
454 AACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * *
16721371 ACGTGATCCTTGTGTTTTTGTTGGTATGCACAAAAACATTAAGCTAAAAACTCGAAGTGTACAAG
519 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
16721436 ATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAAACACTTTAATGGC-CCTGGCAGCAAACC
584 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* *
16721500 TATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCC
649 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
16721565 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
714 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
* * * * **
16721630 CATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGGCGATGGTGTCCCGATGAAAAAAAATATGG
779 CGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATGCGG
* *
16721695 CACAAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGG
844 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * * *
16721740 TCTGGTTCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAATGGTAATGAACTCCGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * *
16721805 TAAGTTAACCCACGAAACGAGCATGCGAGTGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCCG
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAG-CG
* * ** * * * * * *
16721870 TGGATCGACCGGGT-CCCCTTCTGCATGCTGTCGATCCTACTGTCGTAACCGTCGATCCGATCTG
130 GGGATCGACCGGGTCCCCCTT-TGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTCGGTCTG
* * * * * *
16721934 ATCTTAGACTAGGAATGAACTCCATATGCTTAAACCAACTGACGAAATGAGCGGGCGGGCGGGCG
194 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC-
* * * *
16721999 GGAGGGCACTATGCAGGTCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATTGGGTGGTAGGTGG
258 --A-GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
16722064 GTTTAGGCACATTTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
320 GTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
16722129 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
385 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
*
16722194 TTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGACA-GAGTTTTGGCCCCAAACTT
450 TTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGA-AGGAGTTTTGGCCCCAAACTT
* *
16722258 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCAAAGTGT
514 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
*
16722323 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTC-GAACACTTTAATGGCTACTGGCAG
579 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACTGGCAG
* *
16722387 CAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAA
643 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * *
16722452 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGAGCACACCCCCCGACCCC
708 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC
* * * *** * * **
16722517 CCTTGATCGTCGGTACCCCAATACAACCGGTCAAGTTCTCCGGCGATGGTGTCCCGACAAAG-AA
773 CC-CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAA
* * *
16722581 AATACGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGTAACCCTCGG
837 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * * * *
16722633 TCTGATCCGATCTTAGACTGGGAATAAACTCCGTAGGCTTAGACTGAGAATGAACTCTGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
*
16722698 TAAGTCAACCCACGAAACGAGCGTGCGGGAGCTCA----A-C-------C--G--GC-CAAG-GG
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCGG
* * * * * *
16722745 GG--C-ACC---T-----TTAT--GTGCTACCGATCCTGCTACCGTAACCCTCAGTTTGGTTTGA
131 GGATCGACCGGGTCCCCCTT-TGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTCGGTCTGA
* * * *
16722797 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACAAAACGAGCGGGCAGGCGGGCAC
195 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAG
* *
16722862 GCACTACGTCGACCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
260 GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * ** *
16722927 GGCATATCTTCGTATTTCTATCGTGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTC
325 GGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTC
* * * **
16722992 CCTTAAGCCATCATGTGAAGTTTCTTGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTCAAA
390 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
*
16723057 ACTTTTTACAGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAA-TTGGTAGA
455 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGA
*
16723121 CGTGATCCTTGTATTTTTGTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
520 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
16723186 TTTTGTGACAATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
585 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * * *
16723251 ATAAAATCTGAAATGCTCTTTAAGGGGTTGTGAGTTCTCGAGGTTTGATGAGCGATAGGGGGCCA
650 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
**
16723316 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAACCCCCCGG-CCCCCTAAT
715 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCGGCCCCCCCGAT
* ** * * *
16723380 C-TCTGGAACCCCAATGCCGTCGGTCAAGTTCTCCGGTGATAGTGTCCCGGTGAAGAAAAATGCA
779 CGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATGCG
* **
16723444 GCACCAACACATGCCCGAGCCCAGCATGTGCTGCCTTAACCCTCGG
843 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * *
16723490 TCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGCGAATGAACTCTGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
** * * **
16723555 TAAGTCAACCCACGAAATTAGCGTGCGTGCGCTTAGCCGACCAGAGGGGCGGGATGCATAAGCTG
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGC-G
** * * * *
16723620 GGGATCGATTGGGTCCCCC--T-C-TG--A--G-T-GT--TTCCGTAACCCTCGGTTCGGT-TCA
130 GGGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTCGGTCT-G
* * *
16723672 ATGTTAGACTAGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGAGCAGGCGGGCG
194 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G--GGCGGGCG
* * * * * *
16723737 GGCGGGCACTACACCAGCAAGAGCGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
255 GGCAGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* *
16723802 GCTTAGGCACATCATCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
320 GTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAA
* *
16723867 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAAACCACTCGTTTTCTA-TTTTCACGATTT
385 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* ** * *
16723931 TTGAAACTTTTTATGGTTCAATATTTTTTAAAA-TTTTTCAGAAGGAGTTTTGG-CACAAACTTA
450 TTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
* * *
16723994 GTACACGTAATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTA
515 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * * *
16724059 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTCAAACACTTTAATTGCTATTGGCAGCA
580 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
16724124 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCGAGGTTTAATCAGGGATA-GG
645 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
16724188 GGCGAATATAAGGTCCAAGTACCAGCACGCATCGCACATCATGTGCGCACACCCCCCGGCCCCCT
710 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* * * * *
16724253 TGATCGTTGGAACCCTAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAAT
775 CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAAT
* * * * * *
16724318 ACGGCACCAGCACATGTCGGAGCCCAACATGTGCTGCTGCAACCCTCGA
840 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * *
16724367 TCCGGTCCGATCTTAGACTGAGAATGAGCTCCTTATGCTTAGACTGGGAATGAACTCCGTATGCC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * *
16724432 TAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCA
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAG-CG
* * * * * * * * *
16724497 GGGATCGACTGGGTCCCCCTCTGTGTACTGCTGATCCTGCTACCGCAACCCTCAGTTCGGTCTGA
130 GGGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTCGGTCTGA
* * * *
16724562 TCTTAGACTGGGATTGAACTCCATATACCTAAGCCAACCGACGAAACGAGTGGGCGGGCGGGCAG
195 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAG
* *
16724627 GCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTA
260 GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
16724692 GGCACATCTTCATATTTCTTCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTC
325 GGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTC
*
16724757 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
390 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
* * *
16724822 ACTTTTTATGGTTC-GAGATTTTTTAAAATTTTTTTAGAAGGATTTTTGGCCCCAAACTTGGTAG
455 ACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * **
16724886 ATGTGATCCTTGTATTTTTTTTGGCATTTACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
519 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
16724951 ATTTTGTGACCATTTGAAAGAAGTGTCCCCATTGT-AGACACTTTAATGGCTACTGGCTGCAAAC
584 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATT-TCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
16725015 CTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGATTTGATGAGAGATAGGGGGC
648 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * * * *
16725080 AAATATAAGGTCCAAGTACCCGCACCCATCGCATATCATGTGCGCACACCCCCCCGACACCCCCG
713 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCG
* * * * *
16725145 ATCGCCGGAACCCCAATGCCG-CTGGTCAGGTTCTCCGACGATGGTATCTCGGTGAAGAAAAAAG
777 ATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATG
* * * * * * *
16725209 TGGCACCAGCACATGCCTGAGCCCATCATGTGCTGGCGTAGCCCTCGA
841 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
*
16725257 TCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGC-----C------T-AA----G--T--C
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * *
16725302 -AA--CAA---ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCACAAGTCG
66 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAG-CG
* * * * *
16725361 GGGATCGACCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCAACCCTCGGTCCGGCCTGA
130 GGGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTCGGTCTGA
** * * *
16725426 TCTTAGACTGGGAATGAACTTTGAATGCCTAAGCCAACCGACGAAAAGAGTGGGCGGGCGGGCAG
195 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCA-
16725491 GCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
259 ---GGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *** * *
16725556 TTTAGGCACATCTTCATATTTCAGTGGTGCCAATGCTATTTTTCTGGCTTGTGAATTCATACAAT
321 TTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAAT
* * *
16725621 GGTCCCTTATGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTT
386 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* ** *
16725686 TGAAACTTTTTACGGTTC-GAGATTTTTCAAAATTTTTTTTGAAGGATTTTTGGCCCCAAACTTG
451 TGAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
* * *
16725750 GTAGAAGTGATCCTTGTATTTTTGTTGGCATGAATAAAAAAATTCAGCTAAAAACTCGAAGTGTA
515 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
16725815 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGATACTTTAATGGCTACTGGTAGCA
580 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
16725880 AACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTC-ATGGTTTGATGAGGGATAGG
645 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGG
* * * * * **
16725944 GAGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATCACGTGTGCACACCCCCCAACCCCC
709 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
* * * * * *
16726009 TCGATCGCCGGAACCCCAATGTCGTCGTTTAGGTTCTCCGATGATGGTGTCCCGATGAAGAAAAA
774 CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAA
* **
16726074 TACGGCACCAGCACATGCCCGAGCCCAGCATGTAATGCCGCAACCCTCGG
839 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
*
16726124 TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
1 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
16726162 CTAAGCCAAC
Statistics
Matches: 6191, Mismatches: 727, Indels: 289
0.86 0.10 0.04
Matches are distributed among these distances:
855 2 0.00
856 45 0.01
857 378 0.06
858 241 0.04
859 1 0.00
861 229 0.04
862 247 0.04
863 357 0.06
864 168 0.03
865 2 0.00
867 148 0.02
868 464 0.07
869 3 0.00
870 3 0.00
871 4 0.00
872 3 0.00
873 4 0.00
874 8 0.00
875 1 0.00
876 83 0.01
877 285 0.05
878 207 0.03
879 44 0.01
880 647 0.10
881 297 0.05
882 6 0.00
883 5 0.00
884 6 0.00
885 183 0.03
886 51 0.01
887 196 0.03
888 581 0.09
889 489 0.08
890 142 0.02
891 182 0.03
892 163 0.03
893 269 0.04
894 47 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCGG
GGATCGACCGGGTCCCCCTTTGCGTGCTACCGATCCTACTGCCGCAACCCTCGGTTCGGTCTGAT
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGG
CACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
CTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCG
TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCCGATGAAGAAAAATGCGGCA
CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
Found at i:16721780 original size:26 final size:26
Alignment explanation
Indices: 16721751--16721803 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16721741 CTGGTTCGAT
* *
16721751 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
*
16721777 CTTAGAATGGTAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
16721803 C
1 C
16721804 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:16723540 original size:26 final size:26
Alignment explanation
Indices: 16723501--16723553 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16723491 CCGATCCGAT
*
16723501 CTTAGACTGGGAATGAACT-TCGTATG
1 CTTAGACTGCGAATGAACTCT-GTATG
16723527 CTTAGACTGCGAATGAACTCTGTATG
1 CTTAGACTGCGAATGAACTCTGTATG
16723553 C
1 C
16723554 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCTGTATG
Found at i:16724417 original size:26 final size:26
Alignment explanation
Indices: 16724378--16724430 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16724368 CCGGTCCGAT
* *
16724378 CTTAGACTGAGAATGAGCTCCTTATG
1 CTTAGACTGAGAATGAACTCCGTATG
*
16724404 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
16724430 C
1 C
16724431 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:16726193 original size:8 final size:8
Alignment explanation
Indices: 16726180--16726205 Score: 52
Period size: 8 Copynumber: 3.2 Consensus size: 8
16726170 ACCGATGAAA
16726180 CGAGCGGG
1 CGAGCGGG
16726188 CGAGCGGG
1 CGAGCGGG
16726196 CGAGCGGG
1 CGAGCGGG
16726204 CG
1 CG
16726206 GGCACTACGT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
8 18 1.00
ACGTcount: A:0.12, C:0.27, G:0.62, T:0.00
Consensus pattern (8 bp):
CGAGCGGG
Found at i:16726842 original size:712 final size:709
Alignment explanation
Indices: 16725405--16727500 Score: 3397
Period size: 712 Copynumber: 3.0 Consensus size: 709
16725395 TCCTGCTGCT
* ** * *
16725405 GCAACCCTCGGTCCGG-CCTGATCTTAGACTGGGAATGAACTTTGAATGCCTAAGCCAACCGACG
1 GCAACCCTCGGTCTGGTCC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG
* * *
16725469 AAAAGAGTGGGCGGGCGGGC-A---GGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
65 AAACGAG-GGGCGAGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGC
* * *** *
16725530 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCAGTGGTGCCAATGCTAT
129 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * *
16725595 TTTTCTGGCTTGTGAATTCATACAATGGTCCCTTATGCCTTCATGTGAAGTTTCATGGCAAGACG
194 TTTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* ** *
16725660 ACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTCAAAATTTTTTT
259 ACTCGTTTTCTATTTTTCATGATTTTCAAAAC-TTTTACGGTTCGAGATTTTTTAAAATTTTTTT
* ** * * *
16725725 TGAAGGATTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGAATAAAAA
323 AGAAGGATTTTTGGCCCCAAACTTGGTAGACCTGATCCTTTTATTTTTGTTGGCATGCACAAAAA
* * * *
16725790 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
388 AATTCTGTTAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAA-AGTCCCCATTTCA
*
16725855 GATACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGT
452 GACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGT
16725920 TCTCATGGTTTGATGAGGGATAGGGAGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATC
517 TCTCATGGTTTGATGAGGGATAGGGAGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATC
* * * * * *
16725985 ACGTGTGCACACCCCCCAACCCCCTCGATCGCCGGAACCCCAATGTCGTCGTTTAGGTTCTCCGA
582 ACGTGTGCACACCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCATCGGTTAGGTTCTCCGA
*
16726050 TGATGGTGTCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTAATGCC
647 TGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTAATGCC
16726113 GCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGA
1 GCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGA
*
16726178 AACGAGCGGGCGAGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGGGGGGATGCGCAAGCC
66 AACGAG-GGGCGAGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
*
16726243 ATGGATCGATAGGGTGGTAGGTGGGTTTAGACACATCTTCATATTTCTGCCATGCCAATGCCATT
130 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
* * *
16726308 TTTTTAGCTTGTAAAATCATACAATTGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
195 TTTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
*
16726373 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTAACGGTTCGGGATTTTTTAAAATTTTTTTA
260 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTT-ACGGTTCGAGATTTTTTAAAATTTTTTTA
*
16726438 GATGGATTTTTGGCCCCAAACTTGGTAGACCTGATCCTTTTATTTTTGTTGGCATGCACAAAAAA
324 GAAGGATTTTTGGCCCCAAACTTGGTAGACCTGATCCTTTTATTTTTGTTGGCATGCACAAAAAA
* *
16726503 ATTCTGTTAAAAACTCGAACTGTACAATATTTTATGACCATTTGAAAAAAAGTCCCCATTTCAGA
389 ATTCTGTTAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAAGTCCCCATTTCAGA
*
16726568 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGTGTGTGAGTTC
454 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTC
16726633 TCATGGTTTGATGAGGGATAGGGAGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATCAC
519 TCATGGTTTGATGAGGGATAGGGAGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATCAC
*
16726698 GTGTGCACACCCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCATCGGTTAGGTTCTCTGAT
584 GTGTGCACA-CCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCATCGGTTAGGTTCTCCGAT
*
16726763 GATGCTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTAATGCC
648 GATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTAATGCC
* *
16726825 GCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGATGA
1 GCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGA
* * * *
16726890 AACGA-GTG-TA---TG-G-GCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCC
66 AACGAGGGGCGAGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCA
16726948 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
131 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
16727013 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
196 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
* * *
16727078 TCATTTTCTATTTTTCATGATTTTCAAAACATTTTACGGTTTGAGATTTTTTAAAATTTTTTCAG
261 TCGTTTTCTATTTTTCATGATTTTCAAAAC-TTTTACGGTTCGAGATTTTTTAAAATTTTTTTAG
* *
16727143 ACGGATTTTTGACCCCAAACTTGGTAGACCTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAA
325 AAGGATTTTTGGCCCCAAACTTGGTAGACCTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAA
16727208 TTCTGTTAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAAGTCCCCATTTCAGAC
390 TTCTGTTAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAAGTCCCCATTTCAGAC
16727273 ACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCT
455 ACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCT
*
16727338 CATGGTTTGATGAGGGATAGGGAGCCAATATCTGGGCCAAGTTCCAGCACCCATCGCACATCACG
520 CATGGTTTGATGAGGGATAGGGAGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATCACG
* * * ** *
16727403 TGCGCACACCCCCCGGCCCCCCCAATCACCGGAACCCTTATGCCATCGGTTAGGTTCTCCGACGA
585 TGTGCACACCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCATCGGTTAGGTTCTCCGATGA
* *
16727468 TGGTGTTCCGGTGGAGAAAAATACGGCACCAGC
650 TGGTGTCCCGGTGAAGAAAAATACGGCACCAGC
16727501 GCCCAGATGT
Statistics
Matches: 1297, Mismatches: 83, Indels: 21
0.93 0.06 0.01
Matches are distributed among these distances:
703 81 0.06
704 486 0.37
705 5 0.00
706 1 0.00
708 73 0.06
709 4 0.00
710 2 0.00
711 155 0.12
712 490 0.38
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (709 bp):
GCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGA
AACGAGGGGCGAGCGGGCGAGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCA
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTACGGTTCGAGATTTTTTAAAATTTTTTTAGA
AGGATTTTTGGCCCCAAACTTGGTAGACCTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAAT
TCTGTTAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAAGTCCCCATTTCAGACA
CTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTC
ATGGTTTGATGAGGGATAGGGAGCCAATATATGGGCCAAGTTCCAGCACCCATCGCACATCACGT
GTGCACACCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCATCGGTTAGGTTCTCCGATGAT
GGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTAATGCC
Found at i:16727579 original size:26 final size:26
Alignment explanation
Indices: 16727539--16727591 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16727529 CCGATCTGAT
16727539 CTTAGACTGGAAATGAACTCCATATG
1 CTTAGACTGGAAATGAACTCCATATG
* *
16727565 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCATATG
16727591 C
1 C
16727592 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCATATG
Found at i:16727857 original size:158 final size:159
Alignment explanation
Indices: 16727565--16727930 Score: 456
Period size: 158 Copynumber: 2.3 Consensus size: 159
16727555 ACTCCATATG
* * *
16727565 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG-AACTGAGCGTGCTGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC-GAGCATGCGGGCGCTCAC
* * * *
16727629 CCGACCAGAGGGTCGGGATGCGTAAGTAGGGGATCACCCGGGTCCCCCTTTGCGTGCTGTCGATC
65 CCGACCAGAGGGGCGGGATACGTAAGTAGGGGATCACACGGGTCCCCCTTTGCGTGCTGCCGATC
*
16727694 CTGCTGCCGCAA-CCTCAGTCCGATTC-GAT
130 CTGCTGCCGCAACCCTCAGTCCG-GTCAGAT
*
16727723 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCACC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCACC
* * *
16727788 CGGCCAGAGGGGCGGGATACGTAAGCT-GGGGATCGA-ATGGGT-CCCCTTCTGTGTGCTGCCGA
66 CGACCAGAGGGGCGGGATACGTAAG-TAGGGGATC-ACACGGGTCCCCCTT-TGCGTGCTGCCGA
* * *
16727850 TCTTGCTGCCGCAACCCTCGGTCCGGTCAGGT
128 TCCTGCTGCCGCAACCCTCAGTCCGGTCAGAT
* * * * * *
16727882 CTTAGATTGGGAATGAAATCCGTATGTCTAAGCCAATCAACGAAACGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
16727931 TGGGCGGGCG
Statistics
Matches: 180, Mismatches: 22, Indels: 11
0.85 0.10 0.05
Matches are distributed among these distances:
157 6 0.03
158 116 0.64
159 58 0.32
ACGTcount: A:0.22, C:0.28, G:0.29, T:0.21
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCACC
CGACCAGAGGGGCGGGATACGTAAGTAGGGGATCACACGGGTCCCCCTTTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCAGTCCGGTCAGAT
Found at i:16728616 original size:26 final size:26
Alignment explanation
Indices: 16728587--16728639 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16728577 CCGGTCCAAT
*
16728587 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16728613 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16728639 C
1 C
16728640 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16729691 original size:887 final size:879
Alignment explanation
Indices: 16727723--16741338 Score: 16372
Period size: 887 Copynumber: 15.4 Consensus size: 879
16727713 CCGATTCGAT
* * *
16727723 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGCTCACC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16727788 CGGCCAGAGGGGCGGGATACGTAAGCTGGGGATCGAAT-GGGTCCCCTTCTGTGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
16727852 TTGCTGCCGCAACCCTCGGTCCGGTCAGGTCTTAGATTGGGAATGAAATCCGTATGTCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
16727917 ATCAACGAAACGAGTGGGCGGGCGGGCGGGCACTACGGCCAGCCAGAGAAGCGGGATGCGCAAGC
196 ACCGACGAAAAGA-CGGGCGGGCGGGCGGGCACTAC-GCCGGCCAGAGAGGCGGGATGCGCAAGC
16727982 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
** *
16728047 TTTTCTTTCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
** * *
16728112 ACTCGTTTTCTATATTTT-ACGATTTTTGAAACTTTTTACTATTCGAGATTTTTTAAACTTTTTT
389 ACTCGTTTTCTAT-TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * **
16728176 CAGAAGGAGTTTTGGCCCCAAATTTGGTAGACATGATCCTTGTATTTTTGTCAGCATGCACAAAA
453 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
16728241 CAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCATTTC
518 -AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
16728306 AGACACTTTAATGGCTAGTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
16728371 TTCTCGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCACAT
* * *
16728436 CATGTGCGCACA-CCCCCCGACCCCCACGATCGTCGGAACCCCAATGCTG-CTGGTCAGGTTCTC
702 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTC
* * * *
16728499 C-AGTGATGGTGTCCCGGTAAAGAAAAA-AGTGGCACCAGCACATGCCCGAGCCCATCATGTGCT
766 CGA-CGATGGTGTCCCGGTGAAGAAAAATA-CGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
16728562 GGCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
829 GCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16728613 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
16728678 CGGCCAGAGGGGCGGGATACGTAAGCCGAGGATCGAC-CAGGTCCCCCTCTACATGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* ** * * ** * * *
16728742 CTGCTACCATAACCCTCTGCCCCTTCTGATCTTAGACTGGGAATGAACTTCGAATGCCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
16728807 ACCGATGAAAAGAGCGGGCAGGAGGTCGGGCGGGCAAGCACTACGCCCGCCAGAGAGGCGGGATG
196 ACCGACGAAAAGA-CGGGC--G-GG-CGGGC-GG---GCACTACGCCGGCCAGAGAGGCGGGATG
* * * *
16728872 TGCAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTCATGCCA
252 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
* * * *
16728937 ATGCCATTTTTCTAGCTTGTAAATTCATACAATGGTGCCTTAAGCCTTCAAGTGAAGTTTAATGG
317 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * *
16729002 CAAGACGACTCATTTTTTATTTTTCACGATTTTTGAAAC-ATTTACGGTTCGGGATTTTTTAAAA
382 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* * * *
16729066 TTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGTCGTGATCCTTATATTTTTGTTGGCATGT
447 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
*
16729131 ACAAAAATATTCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
512 ACAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
16729196 CATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCGAATGCTCTTTAAGAGGG
576 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
16729261 TGTGAGTTCTCGAGGTTTAATGAGGGATA-GG-GGGCCAAGTACCAGCACCCATCGCACATAATG
641 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
16729324 TGCGCACACCCCGCCCCTGCCCCCCCGATCGTCGGAACCCCATTACCGTCGGTCAGGTTCTCAGT
706 TGCGCACA-CCC-CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * * *
16729389 CGATGGTGTCTCGGCGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCAC
769 CGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* *** * **
16729454 AAACCTCGGTCCGGTTTTATCTTATACTATGAATGAACTCCGTATG
834 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
16729500 TTTAGACTTGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16729565 CGGCCAGTGGGGCGAGATGCGCAAGCCGGGGATCGACT-GGGTCCCCCTCTGCGTGCTGGCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
16729629 CTGCTGCCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATACCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
16729694 ACCGACG--AA-ATGGGCGGGCGGGCGGGCACCACGCCGGCCAGAGAGGCAGGATGCGTAAGCCA
196 ACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* *
16729756 TGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCATTGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
** * * *
16729821 TTCAAGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAGGTTTCATGGCAAGATGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
** * *
16729886 TCGTTTTCTATTTTTCATTATTTTCGAAACTTTTTACGGTTCTGGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * *
16729951 AAGAATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAACAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA-AAA
* *
16730016 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16730081 CACTTTAATGGCTACTAGCAGCAAACTTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16730146 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAACTACCAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
16730211 GTGCGCACACCCCTCCGGCCACCCCCGATCG-CTGGAACACCAATG-TGTTGGTCAGGTTCTCCG
705 GTGCGCACACCCCCCCGGCC-CCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * *
16730274 ACGATGGTGTCCCAGAGAAGAAAAAAATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCG
768 ACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
16730339 TAACCCTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTCCATATG
833 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** * * *
16730386 CTTAGACTGGGAATGAAGTCCGTATGCCTAAGTCAACCCTCGAAACGAATGTGTGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
16730451 CGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCG-GTCGGGTCCCCCTCTACGTGCT-ACTGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTC-GAT
* *
16730514 CCTACTGCCGCAACCCTCGGTCTC-GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
130 CCTGCTGCCGCAACCCTCGGTC-CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * *
16730578 CAAACGACG--AA-A----CGGGCGGGCAGACACTACGTCGGCCAGAGAGGAGGGATGCGGAAGC
194 CAACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * * * **
16730636 CATGGATCGGTAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTCTACCATAACAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
* * * *
16730701 TTTTCTAGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCATGTGAAGTTTCATTGCAAGATG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* ** * *
16730766 ACTCGTTTTCTATTTTTTACGATTTTTGAAACTTTTTACTATTCGAGATTTTTTAAACTTTTTTC
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * *
16730831 AGAAGGAGTTTTGGCCCCAAATTTGGTAGACATGATCCTTGTATTTTTGTCGGCATGCACAAAAC
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-
16730896 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-
* *
16730960 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCCCAAATGCTCTTTAAAGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
16731025 TTCTCGAGGTATGATGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATA-GGG---------AGGGCCAAGTACCAGCACCCATCGCACAT
* *
16731090 CATGTGCGCACACCCCACCCCGGCCACCCCCGATCGTCGGAACCCCAATGTCGTGGGTCAGGTTC
702 CATGTGCGCACA-CCC-CCCCGGCC-CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
* * *
16731155 TTCGACGATGGTGTCCCGGAGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCT
764 TCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
16731220 GCCGTAA-CC-C--T-CGATCCGA---T---C------TG-A-----T-TG
829 GCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16731247 --TAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCTACGAAATGAGCATGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16731310 CGGCCAGAGGGGTGGGATACGCAAGCCAGGGATTG-GTCGAGTCCCCCTCTGCGTGCTATCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * *
16731374 CTGATGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
16731439 ACCGACGAAACATG-CGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGGCGAGATGCGCAAGC
196 ACCGACGAAA-A-GACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
16731503 CGTGGATCAATAGGGTGGTAGGTGAGG-TTATGCACATTTTCATATTTCTGCCATGCCAATGCCA
259 CGTGGATCGATAGGGTGGTAGGTG-GGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA
* * *
16731567 TTTTCCTGGCTTGAAAATTCATACAACGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
323 TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* ** *
16731632 GACTCGTTTTTTATTTTTCATAATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTT
388 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
*
16731697 CAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
453 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
16731762 AACTTTAGTTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTC
518 AA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * **
16731827 AAACATTTTAATGGCTACTACTGGCAGCAAACCTGTAAAATCTTAGTTGCTCTTTAAGGGGGTGT
582 AGACACTTTAATGG---CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
16731892 GAGTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACCAGCACCCAACGCA
644 GAGTTCTCGAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCA
* *
16731957 CATCATGTGCGCACACCCCCCCCGACCACCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
699 CATCATGTGCGCACA-CCCCCCCGGCC-CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGT
** * *** * * *
16732022 TCTCCGACGATGGTGTCCCGACGAAGAAAAATGCGATGCTAGCACATGCTCGAGCCCAGAATGTG
762 TCTCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * *
16732087 CTGCCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAGTGAACCCCGTATG
827 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
16732140 CTTAGACTGGGAATGAACTCCGTATTCCTAAGTCAAGCCATGAAACGAGCGTGTGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** *
16732205 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGAC-CGGGTTCCCCTCTACGTGGGGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * * *
16732269 CTACT---GCAACGCTCGATCTGGTCCGATCTGAGACTGGGAATGAACTCCGTATGTCTAAGCTA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * *
16732331 ACCGACG--AA-ACGGACGGTCGGACGGGCACTACACCGGCCAGAGAGACGGGATGCACAAGCCA
196 ACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
16732393 TGGATCGATAGGGTGGTAGGTGGGTTTCGACACATCTTCATATTTCTACCATGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
*
16732458 TTCTGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
** * *
16732523 TCGTTTTCTATTTTTCA-TTTTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
16732587 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAA
*
16732652 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
16732717 CACTTTAATGGCTAGTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
16732782 TCAAGATTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAG
650 TCGAGGTTTGATGAGGGATA-GGG---------AGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
16732847 GTGCGCACA-CCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCTG-CTGGTCAGGTTCTCCGG
705 GTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGA
* * * * *
16732910 TGATGGTGTCCCGGTAAAGAAAAA-AGTGGCACCAGCACATGCCCGAGCCCATCATGTGCTGGCG
769 CGATGGTGTCCCGGTGAAGAAAAATA-CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
*
16732974 CAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
833 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16733021 CTTAGACTAGGAATGAAGTCCGTATGCCTAAGTCAACCAATGAAATGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
16733086 CGGCCAGAGGGACGGGATGCGCAAGCCAAGGATTGA-TCGGGTCCCCCTCTACATGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * ** ** * *
16733150 CTGCTACTGTAACCCTCTGCCCCTTCTAATCTTAGACTGGGAATGAACTTCGAATGCCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
16733215 ACCGATGAAAAGAGCGGGCAAGCGGTCGGGCGGGCAAGCACTACGCCCGCCAGAGAGGCGGGATG
196 ACCGACGAAAAGA-CGGGC--G-GG-CGGGC-GG---GCACTACGCCGGCCAGAGAGGCGGGATG
* * **
16733280 CGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTGAGCCATGCCA
252 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCA
* * * * * * * *
16733345 ATACCTTTTTTTTGGCTTGTAAATTCACACAACGGTCCCTTAAACCTTCATGTGAGGTTTCATGC
317 ATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGG
* * *
16733410 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAACCTTTTTACGGTTCGGGATTTTTCAAAA
382 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* *
16733475 TTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGCCATGC
447 TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * *
16733540 ACAAAAAAATTCAGCTAAAAACTAGAAGTATACAAGATTTTGTGACTATTTGAAAAAAGTGTCCC
512 AC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * * * *
16733605 CATTTTAGACACTTTAATGGCTACTGGTAGCAAACTTGTAAAGTGTCAAATGCTCTTTAAGGGAG
576 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* **
16733670 TGTGAGTTCTCGAGGTTTGATGAGGGATA-GG-GGGCCAA-T---A-TA---AGGGC-CA--A-G
641 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGGGCCAAGTACCAGCACCCATCGCACATCATG
* *
16733721 TGC-CAGCACCCATCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCATCGATCAGGTTCTCCG
706 TGCGCA-CACCC--CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * *
16733785 ACGATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATATGCTGCCG
768 ACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
** ** * * *
16733850 TGACCCTCGGTCCGACCCAATCTTAGACTGGGAATGAACTTCATATG
833 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16733897 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAAGCCATGAAACAAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
16733962 CGGCCAGAGTGGCGGGATTCGGAAGCCAGGGATCG-GTCGGGTCCCCCTCTTCGTGCTATC-ATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * **
16734025 CTGCTGCCACAACCCTCAGTCTGTTCCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGTTA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
16734090 ACCGAC-AAAATGAGCGGGCGGGCGGGCGGGCACTACGCTGGCTAGAGAGACGGGATGCGCAAGC
196 ACCGACGAAAA-GA-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* *
16734154 TGTGGATCGATAGGGTGGTAGGTGGGTATAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
*
16734219 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGTCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * * **
16734284 ACTCGTTTTCTCTTTTTGATGATTTTTTAAACTTTTTATTGTTCGGGATTTTTTAAAATTTTTTC
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
*
16734349 AGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAA
16734414 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
16734479 GACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
16734544 TCTCGAGGTTTAATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCACATC
* * * ** * *
16734609 ATGTGCAAACACCCGCCCCCCCGGGCCCCCCGATCACCAGAACCCCAATGCCGCCGGTCAGGTT-
703 ATGTGC--GCA--CACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
** * ** *
16734673 TACCGGTGATGGTGTCCCCGCAAAGAAAAAT-C-G-ATGCAGCACATGCCCGAGCCCAGCATGTG
764 T-CCGACGATGGTGTCCCGGTGAAGAAAAATACGGCA-CCAGCACATGCCCGAGCCCAGCATGTG
*
16734735 CTGCCGCAA--C-C-AT-C-G---G----T---C------TG-A-TCCG-AT-
827 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
16734762 CTTAGACTGGGAATGAAATCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * ** *
16734827 CGGCCAGAGGGGCAAGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTTCTACCGATT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * *
16734891 CTACTGCTGTAACCCTCGGTCCAGTCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
16734956 ACCGATGAAACGAACGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGGCGGGATGCGCAAGCC
196 ACCGACGAAAAG-ACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * ***
16735021 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTACCGCACCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
16735086 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * * *
16735151 CACGTTTTCTA-TTTTCATGATTTTTAAAACTTTTTACGGTTTGGGATTTTTGAAAATTTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
* * * *
16735215 GAAGGAGTTTTAGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-CAAAAA
*
16735280 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTTGTTACCATTTG-AAAAAGTTGTCCCCATTTC
519 ATTCAGCTAAAAACTCGAAGTGTACAAGA-TTTTGTGACCATTTGAAAAAAG-TGTCCCCATTTC
*
16735344 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
16735409 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCATAT
647 TTCTCGAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCACAT
* * *
16735474 CATGTTCGCACA-CCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCT
702 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* ** * *
16735537 GGCGATGGTGTCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCC
767 GACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * * *
16735602 GCAACCCTCGGTCTGATCCAATCTTAGACTGGGAAAGAACTCCGTA-A
832 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
16735649 CTTAGATTGGGAATGAACTCCGTATGTCTAAGTCAACCCACGAAAC-ATGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA-GCGTGCGGGCGCTCAG
* * * * * *
16735713 TCGGCCAGAGGGGCGGGATGCGTAAGTCTGGGATCGA-TCGGGTCCCCCTTTGCATGCTGTCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * * * * *
16735777 CCTGCTACAGCAACCCTTGGTCCAGTTCGATCTTACACTGGGAATGATCTCCGTATGCCTAAGCC
130 CCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
16735842 ATCTGAC--AAA-ACGAGAGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
195 AACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
16735904 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATG-CAATTGCCAT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAA-TGCCAT
*
16735968 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAACACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* *
16736033 ACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCGGGATTTTTCAAAATTTTTTC
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* *
16736098 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGAACAATAC
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA-AA
* * *
16736163 AATTCAGCTAAAAACTAGGAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTCA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
16736228 GACACTTCAATGGTTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
16736293 TCTCGAGGTTTGACGAGGGATAGGGGGCCAATATAAGGGCCAAATGCCAGCACCCATCGAACATC
648 TCTCGAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * * * *
16736358 ATGTGCGCACACCCGCCTGGCCCCCCCCGATCATTGAAACCCCAATGCCATCAGTCAAGTTCTCC
703 ATGTGCGCACACCCCCCCGG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * * * *
16736423 GACGATGGTGTCTCGATGAAGAAAAATGCGGCACTAGCACATGCCCAAGCCCAGCATGTGCTCCC
767 GACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * *** * *
16736488 ACGACCCTCGGTCTAATCCGATCTTAGATTGGGAATGAACAT-TGTATG
832 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAC-TCCGTATG
* *
16736536 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
16736601 CGGTCAGAGTGGCGGGATTCGCAAGCCAGGGATCG-GTTGGGTCCCCCTCTGCATGTTGTC-ATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
16736664 CTGTTGCTGTAACCCTCGGTCTGGTCCGATCTTAGACTGAGAATGAATTCCGTATGCCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
16736729 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCC
196 ACCGACGAAAAGA-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCC
* * *
16736794 GTGGATCGATAGGGTGGTAGGTGGGTATAGGCACATCTTCCTATTTCTACCATGCCAATGCCATT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATT
16736859 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
325 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* * * *
16736924 CCCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGAATTTTCTAAAATCTTTTCA
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCA
16736989 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
455 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * ** *
16737054 ATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTTTCCATTTCAAA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
16737119 CACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
16737184 TCGAGGTTTGATGAGGGTTAGGGGGCCAATATAAGGGCCAAGTACCGGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
16737249 GTGCGCACACCCCCCCCGGCCGCCCTGATCGTCGGAACCCCAATGCTGTCGGTCAGGTTCTCCGA
705 GTGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * *
16737314 CGATGGTGTCCCGATGAAGAAAAATACGGCACCACCACATGCTCGAGCCCAGCATGTGCTGCCGC
769 CGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* **
16737379 AACCCTCGATCCAATCCGATCTTAGACTGGGAATGAACTCCGTATG
834 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * ** * *
16737425 CTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCACCAATTGAGCGTGCAGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
*** * * * **
16737490 CAAACA-AAGGGCCGGATGTGCAAGCCGGGGATCGAC-CGGGTCCCCCTCCACGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* ** * * * * * *
16737553 CTGTTGCCTTAGCCCTCGGTTCGATCCGATCTTAGACTGGGAATGAACTTCGTATCCCTAAGCAA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
16737618 ACCGACGAAATGA---ACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGAGTAAGCTG
196 ACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* ***
16737680 TGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTTGTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* * *
16737745 TTTTTGCTTGTAAATTCATACACTGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
** * * *
16737810 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGATTCGAGATTTTCTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
*
16737875 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCACAAAACAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-AA
* * *
16737940 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTTAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
16738005 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATACTCTTTAAAGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
16738070 TCAAGGTTTGATGAGAGATAAGGGCCTAATATAAGGGCCAAGTACCAGCATCCATCGGACATCAT
650 TCGAGGTTTGATGAGGGAT-AGGG---------AGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
16738135 GTGCGCA-AACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCAGGTTCTCCGAC
705 GTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
* ** * * * * *
16738199 GATGGTGTCCTGACGAAGAAAAATACGGCACCAACACATGCCCAAGCCTAGCATGTGCTGTCGGA
770 GATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* ** *
16738264 ACCCTCGGTCTGGTTTGATCCTAGACTGGGAATGAACTCCGTATG
835 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** **
16738309 CTTGGACTGGGAATAAACTTTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCATGCGCT-AGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16738373 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCG-GTCGGGTCCCCCTCTACATGCTGTTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
* ** * *
16738437 CTACTATCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
131 CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * ** *
16738502 ATCGACG--AA-A----CGAGCGTGCGGGCACTGCGTTGGCCAGATAGGCGGGATGCGCAAGCCG
196 ACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
* * *
16738560 TGGATCGATAGGGTGATAGGTGGGTTTCGGCACATCTTCATATTTCTGCCGTGCCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
* **
16738625 TTTTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGCAAAGTTTCATGGCAAGACGAC
326 TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
** * * *
16738690 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACTGTTTGAGATTTTTTAAAATTTTTTCAG
391 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
* * * * * * * *
16738755 AAAGA-TTTTTGACCCAAACTTGGTAAACCTGATCCTTGTATTTTTCTAGGCTTGCACAAAAAAA
456 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAA
* *
16738819 TTCAGCTAAAAACTCGAAGCGTACCAA-ATTTTGTGACCAATTGAAAAAAGTGTCCCCATTTCAG
520 TTCAGCTAAAAACTCGAAGTGTA-CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
16738883 ACACTTTAAAGGCTACTGGCAGCAAA-CTAGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGT
584 ACACTTTAATGGCTACTGGCAGCAAACCT-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
16738946 TC-CTGAGGTTTGACGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
648 TCTC-GAGGTTTGATGAGGGATA--GGG--------AGGGCCAAGTACCAGCACCCATCGCACAT
* * ** * * *
16739010 CATGTGCGCACACCCCCCCCGGCCCCCACAATCACCGAAACCCCAATGTCGTAGGTCAGGTTCTC
702 CATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * *
16739075 CGACAATGGTGTCCCGGTGAAAAAAAATGCGACACCCGAAG-ACATG-CCGAGCCCAGTATGT-C
766 CGACGATGGTGTCCCGGTGAAGAAAAATACGGCA-CC--AGCACATGCCCGAGCCCAGCATGTGC
* * * * * *
16739137 -G-CG-AAACCTTGGTTCGGT-CGATTTTCGACTGGGAAATGAACT-CTTATG
828 TGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGG-AATGAACTCCGTATG
* ** *
16739185 CTTAGACTGGAAATGAAACTCAATATGCCT-AGTC-ACCCACGGAAC-AGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATG-AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
16739247 -C-G-CAGAGGGGCGGGAT-CGCAAGCC-AGGATCGA-TCGGGTCCGCCTCTGTGTGTTGTCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * ** * * * *
16739306 CCTACTACCACAACCCTTAGTCCGGTCTGATCTTACACTAGGAATGAACTCCGTATGCCTATGCC
130 CCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *** *
16739371 AACTGACGAAACGAGCGGGC-GGCGGGCGGGCA-TGCATTGGCCAGATAGGCGGGATGCGCAATG
195 AACCGACGAAAAGA-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAA-G
16739434 CCGTGGATCGATAGGGTGGTAAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGGC
258 CCGTGGATCGATAGGGTGGT-AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAAT-GC
*
16739499 CATTTTTTTGGCTTTGTAAATTCATA-AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
321 CATTTTTCTGGC-TTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA
* *
16739563 GACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAAGGTTCGGGATTTTTTAAAATTT
385 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * *
16739628 TTTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTAGGCATGCATA
450 TTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-C
*
16739693 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
16739758 TTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCCTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
16739823 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATGAGGGCCAAGTACCAGCACCCATCGCA
644 GAGTTCTCGAGGTTTGATGAGGGATA---GG-------GAGGGCCAAGTACCAGCACCCATCGCA
* * ** * * * *
16739888 CATCTTGTGCGCACA-CCCCCCGG-CCCTCCGATCACCGGAACCCTAATGTCGTCAGTCAGGTTA
699 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTC
* * * * **
16739951 TCCGACAATGATGCCCCGGTGATGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
764 TCCGACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * ** * *
16740016 GCCACAACACTCAATCCGGT-TGAATCTCAGACTGGGAATGAACTCCGTATG
829 GCCGCAACCCTCGGTCCGGTCCG-ATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
16740067 CTTAGATTCGAAATGAACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTGTGGGCGTTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
16740132 CTGTCAGAGTGGCGGGATGCGCAAGCCGGGGATC-AGC-CGAGTCCCTCTCTGTGTACTGCCGA-
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CTCGGGTCCCCCTCTGCGTGCTGTCGAT
* * * * * *
16740194 CCTTGCTGCTGCAACCATCGATCCGGTCCAAACTTAGACTGGGAATGAACTCTGTATGCCTAAGC
130 CC-TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
16740259 CAACCGACGAAATGA---GCGGGCGGGCGGGCACTACGCCGGCTAGAGAGGCGGGATGCGCAACC
194 CAACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* *
16740321 CGTGGATCGATAGGGTGGTAAGTGGGTTTGGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
*
16740386 TTTTCTGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
* * * * *
16740451 ACTCGTTTTCTATTCTTCATGATTTTTGAAACTTTTTAGGGTTCGAGATTTTTGAAAATTTTTTC
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
16740516 AGAAGGAGTTTTGGCCCCAAAC----TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
454 AGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAA
* *
16740577 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATTTTA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
16740642 GACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
16740707 TCTCAAGGTTTGATGAGGGATAGGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
648 TCTCGAGGTTTGATGAGGGATA---GGG--------AGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
16740772 CATGTGCGCATACCCCCCCGGCCCCCCCGATTGCCGGAACCACAATGCCGCCGGTCAGGTTCTCC
702 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * ** * **
16740837 GGCGATGGTGTCCCGGTGAAGAGAAATGTGGCACCAGCACATGCCTGAGCCTTGCATGTGCTGCC
767 GACGATGGTGTCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * *
16740902 GCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATG
832 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
16740950 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAACAAGCTTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
16741015 CGGCCAGAGGCGTGGGATGCGCAAGCCGGAGATCGACT-GGGTCCCCCTCTGTGT-CTTGCCGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGC-TGTCGAT
***** * *** * *
16741078 CCTGCCAATACAACCCTCGATTTAGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCC
130 CCTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
16741143 ATCCGACGAAATGAACGGGTGGGCGGGCGGGCACTACGCCGGCCAAAGAGGCGAGATGCGCAAGC
195 AACCGACGAAAAG-ACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
*
16741208 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTCATGCCAATGCCAT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCAT
16741273 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
324 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
16741338 A
389 A
16741339 ACTCCATATG
Statistics
Matches: 11088, Mismatches: 1342, Indels: 595
0.85 0.10 0.05
Matches are distributed among these distances:
858 1 0.00
859 170 0.02
860 61 0.01
861 13 0.00
862 38 0.00
863 1 0.00
864 3 0.00
865 249 0.02
866 399 0.04
867 747 0.07
868 8 0.00
869 107 0.01
870 215 0.02
871 18 0.00
872 19 0.00
873 11 0.00
874 26 0.00
875 256 0.02
876 545 0.05
877 86 0.01
878 182 0.02
879 299 0.03
880 668 0.06
881 412 0.04
882 524 0.05
883 671 0.06
884 838 0.08
885 421 0.04
886 703 0.06
887 988 0.09
888 283 0.03
889 538 0.05
890 478 0.04
891 40 0.00
892 64 0.01
893 71 0.01
894 7 0.00
895 117 0.01
896 392 0.04
897 412 0.04
898 7 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (879 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGTCGATC
CTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
ACCGACGAAAAGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTT
TTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGTCCC
GGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
GGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:16730389 original size:26 final size:26
Alignment explanation
Indices: 16730360--16730412 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16730350 CCAGTTCGAT
16730360 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
16730386 CTTAGACTGGGAATGAAGTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
16730412 C
1 C
16730413 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:16732150 original size:26 final size:26
Alignment explanation
Indices: 16732114--16732164 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
16732104 CTGGTCTGAT
*
16732114 CTTAGACTGGGAGTGAACCCCGTATG
1 CTTAGACTGGGAATGAACCCCGTATG
*
16732140 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACCCCGTAT
16732165 TCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.22, G:0.27, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACCCCGTATG
Found at i:16733024 original size:26 final size:26
Alignment explanation
Indices: 16732995--16733047 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16732985 CCGGTCCAAT
*
16732995 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16733021 CTTAGACTAGGAATGAAGTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16733047 C
1 C
16733048 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16735659 original size:25 final size:25
Alignment explanation
Indices: 16735624--16735672 Score: 80
Period size: 25 Copynumber: 2.0 Consensus size: 25
16735614 CTGATCCAAT
16735624 CTTAGACTGGGAAAGAACTCCGTAA
1 CTTAGACTGGGAAAGAACTCCGTAA
* *
16735649 CTTAGATTGGGAATGAACTCCGTA
1 CTTAGACTGGGAAAGAACTCCGTA
16735673 TGTCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
25 22 1.00
ACGTcount: A:0.33, C:0.18, G:0.24, T:0.24
Consensus pattern (25 bp):
CTTAGACTGGGAAAGAACTCCGTAA
Found at i:16736560 original size:26 final size:26
Alignment explanation
Indices: 16736510--16736562 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
16736500 CTAATCCGAT
* *
16736510 CTTAGATTGGGAATGAACATTGTATG
1 CTTAGACTGGGAATGAACATCGTATG
16736536 CTTAGACTGGGAATGAAC-TCCGTATG
1 CTTAGACTGGGAATGAACAT-CGTATG
16736562 C
1 C
16736563 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 1 0.04
26 23 0.96
ACGTcount: A:0.28, C:0.15, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACATCGTATG
Found at i:16737428 original size:26 final size:26
Alignment explanation
Indices: 16737399--16737451 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16737389 CCAATCCGAT
*
16737399 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16737425 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16737451 C
1 C
16737452 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16740953 original size:26 final size:26
Alignment explanation
Indices: 16740924--16740976 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16740914 CTGGTCTGAT
16740924 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16740950 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
16740976 C
1 C
16740977 CTAAGTTAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:16742258 original size:26 final size:26
Alignment explanation
Indices: 16742229--16742281 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16742219 CTGATCCGAT
*
16742229 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16742255 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16742281 C
1 C
16742282 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16743357 original size:887 final size:852
Alignment explanation
Indices: 16741386--16743991 Score: 3179
Period size: 887 Copynumber: 3.0 Consensus size: 852
16741376 TCCCGGCGAA
* * * ** * * *
16741386 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCTCTCATTCGGCTAGAGGGGCA
1 GAACTCCGTATGCCTAAGTCAACACATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAGCG
** * * ** * * * * ** *
16741451 GGATGCGTAAGCCGAGGATTGACCGGGTCCCCCTCTACGTGTTATCAATCCTGTTGTC-GCAACC
66 GGATGCACAAGCCGGGGATCGACCGAATCCCCCTCTGCGTGCTACCGATCCTACT-ACAGCAACC
* * * * * * * * * *
16741515 CTCGATTCGGTCTGATCTTAGACTAGGAATGAACACCGTATTCCTAAGCCAACCGAGGAAACGAG
130 CTCGGTCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATACCTAAGCCAACCAACGAAACGAG
* * *
16741580 CGGGCGGGCGGGAACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCATGGATCGATAGGATGGT
195 CGGGCGGGCGGGCACTA-G-C-GCCAGAGA-GCGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
16741645 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCA-TTTTCAAGCTTGTAAATTC
256 AGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTC
* *
16741709 ATACAATGGTCCCTTAAGCCTTCTTGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTTTTCA
321 ATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* ** * * *
16741774 CGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCACCA
386 CAATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGCAATTTTGGCCCCA
*
16741839 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACACGA
451 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
16741904 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGT-TTCCCCA-TTCTAGACACTTTAATGGCTAC
516 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTT-CCCATTTC-AGACACTTTAATGGCTAC
* * * *
16741967 TGGCAGTAAACCTATAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTTTTGAGGTTTGA-CGA
579 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG-TTGATC-A
* **
16742031 GGGATAG-GGGACCAATATAAGGGCCAAGTACCAACACCCATCGCACATCATGTGCGCACACCTT
642 -GGATAGAGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * * * * * *
16742095 CTGGCCCCCCCGATTGTCGAAACCCCAATGCCACCGGTC-GGTTCTTCGACGATGGTGTTTCGGT
705 CCGCCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGGTGTCTC-GT
* * * * * * * *
16742159 GAAGAAAAAGGTGACACCAGCACATACCCAAGCCCAGTATTTACTGCCGTAACCCTCGGTCTGAT
769 GAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC-G--
16742224 CCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAAT
827 --G-TC-----C---G---G---TCTG-AT-CTTAGACTGGGAAT
*
16742269 GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAGCG
1 GAACTCCGTATGCCTAAGTCAACACATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAGCG
** * ** * * *
16742334 GGATGTGCAAGCTGGGGATCGACCGGGTCCCCCTCTGCGTGCTATCGATCCTACTGCCGCAACCC
66 GGATGCACAAGCCGGGGATCGACCGAATCCCCCTCTGCGTGCTACCGATCCTACTACAGCAACCC
* * * *
16742399 TTGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCAACGAAACGAGC
131 TCGGTCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATACCTAAGCCAACCAACGAAAC--G-
16742464 AGGCGGGCGGGCGGGCACTATGCCGCCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
193 A-GCGGGCGGGCGGGCACTA-G-CG-CCAGAGAG-CGGGATGCGCAAGCCGTGGATCGATAGGGT
*
16742529 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTCGCTTGTAAA
253 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAA
16742594 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
318 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * *
16742659 TCACAATTTTTGAAACTTTTTACGATTTGGGATTTTTGAAAATTTTTTCAGAAGCAATTTTGGCC
383 TCACAATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGCAATTTTGGCC
*
16742724 CCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGCATGCA-AAAAAAATTCAGCTAAAAACT
448 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
16742788 CGGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTATAATGGCTA
513 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTA
** *
16742853 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGATTCGATCA
578 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTT-GATCA
16742918 GGTATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
642 GG-ATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * *
16742983 CGACCCCCCCTCGATCGTCGGAACCCCAATGCCATCGGTCAGGTTCTCCGGTGATGGTGTCTCGC
706 CG-CCCCCCC-CGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGGTGTCTCGT
* * * *
16743048 GAAGAGAAATGCGGCACCAGCACATTCCTGAGCCCAGCATGTGTTGCCGCAACCCTCGGTCCGGT
769 GAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
16743113 CTGATCTTAGACTGGGAAT
834 CTGATCTTAGACTGGGAAT
* * * * * *
16743132 TAACTCCGTATGCCTATGTCAACACATGAAACGAGCGTGCGGGCGCTCAGTCGGGCATAGGGGCG
1 GAACTCCGTATGCCTAAGTCAACACATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAGCG
* * * * *
16743197 GGATGCACAAGCCGGGGATTGGCTGAATCCCCCTCTGTGTGCTGCCGATCCTACTACAGCAACCC
66 GGATGCACAAGCCGGGGATCGACCGAATCCCCCTCTGCGTGCTACCGATCCTACTACAGCAACCC
* * *
16743262 TCGGTCCAGTCCGATCTTAGATTGGGAATAAACTCCGTATGCCTAAGCCAACCGACG-AA--A-C
131 TCGGTCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATACCTAAGCCAACCAACGAAACGAGC
*
16743323 GGGCGGGTGGGCACTACGTCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
196 GGGCGGGCGGGCACTA-G-C-GCCAGAGA-GCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* *
16743388 GGTGGGTTTAGGCACATCTTCATATTTCTACCATGCCAATGCCATTTTTCTGGCTTGTAAATTCA
257 GGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCA
* * * *
16743453 TACAATGGTCCCTTAAGCTTTCATGTGAAGTTTTATGGCAAGATGACTCCTTTTCTATTTTTCAC
322 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
*
16743518 AATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGC-ATTTTGGCCCCA
387 AATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAA-GCAATTTTGGCCCCA
* ** * * * *
16743582 AACGTATTAAACGAGATACTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGA
451 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* *
16743647 ATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
516 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTG
* *
16743712 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTTGAGGTT--T--TGAT
581 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTGATCAGGAT
* * * *
16743773 -GAGGG-----ATAGGGAGCCAAGTACCAGCACCCATCACACATCATGTCCGCAGACCCCCCCTC
646 AGAGGGCCAATATAAGG-GCCAAGTACCAGCACCCATCGCACATCATGTGCGC--ACACCCCC-C
* * * * *
16743832 GGCCCCCCCAATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGATAA
707 GCCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGGTGTCTCG-TGA
* * * * ** * * *
16743897 AGAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATGAGCTATCGCAACCCTCAGTCCGATCC
771 AGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCT
*
16743962 GATCTTAGACTAGGAAT
836 GATCTTAGACTGGGAAT
16743979 GAACTCCGTATGC
1 GAACTCCGTATGC
16743992 TTAGACTGGG
Statistics
Matches: 1532, Mismatches: 165, Indels: 88
0.86 0.09 0.05
Matches are distributed among these distances:
844 5 0.00
845 33 0.02
846 48 0.03
847 95 0.06
848 2 0.00
849 5 0.00
850 2 0.00
851 1 0.00
853 1 0.00
855 273 0.18
856 140 0.09
857 1 0.00
862 2 0.00
863 174 0.11
864 2 0.00
865 4 0.00
868 1 0.00
871 1 0.00
874 1 0.00
879 2 0.00
880 1 0.00
882 1 0.00
883 161 0.11
884 1 0.00
885 3 0.00
886 7 0.00
887 288 0.19
888 192 0.13
889 67 0.04
890 18 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (852 bp):
GAACTCCGTATGCCTAAGTCAACACATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAGCG
GGATGCACAAGCCGGGGATCGACCGAATCCCCCTCTGCGTGCTACCGATCCTACTACAGCAACCC
TCGGTCCAGTCCGATCTTAGACTGGGAATAAACTCCGTATACCTAAGCCAACCAACGAAACGAGC
GGGCGGGCGGGCACTAGCGCCAGAGAGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCTTGTAAATTCATACA
ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATT
TTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGCAATTTTGGCCCCAAACTT
GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
ACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGCAGC
AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTGATCAGGATAGAGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCC
GATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGGTGTCTCGTGAAGAAAAATGC
GGCACCAGCACATACCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGAC
TGGGAAT
Found at i:16743994 original size:26 final size:26
Alignment explanation
Indices: 16743965--16744017 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16743955 CCGATCCGAT
16743965 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
16743991 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16744017 C
1 C
16744018 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16744748 original size:26 final size:26
Alignment explanation
Indices: 16744719--16744771 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
16744709 CCGGTCCGAT
16744719 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16744745 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16744771 C
1 C
16744772 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16744887 original size:754 final size:746
Alignment explanation
Indices: 16743418--16744891 Score: 2219
Period size: 754 Copynumber: 2.0 Consensus size: 746
16743408 CATATTTCTA
*
16743418 CCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCATGTGAAG
1 CCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAG
* *
16743483 TTTTATGGCAAGATGACTCCTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATT
66 TTTTATGGCAAAACGACTCCTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATT
16743548 TTTTAAAATTTTTTCAGAAGGCATTTTGGCCCCAAACGTATTAAACGAGATACTTGTATTTTTGT
131 TTTTAAAATTTTTTCAGAAGGCATTTTGGCCCCAAACGTATTAAACGAGATACTTGTATTTTTGT
* * * *
16743613 TGGCATGCACAAAAAAATTCAGTTAAAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAA
196 TGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAATTTGTGACCATTTGAAAAA
* * *
16743678 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
261 AGTGTCACCATTTCAGAAACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTT
*
16743743 TCAGGGGGTGTGAGTTCTTGAGGTTTTGATGAGGGATAGGGAGCCAAGTACCAGCACCCATCACA
326 TAAGGGGGTGTGAGTTCTTGAGGTTTTGATGAGGGATAGGGAGCCAAGTACCAGCACCCATCACA
* *
16743808 CATCATGTCCGCAGACCCCCCCTCGGCCCCCCCAATCGTCGGAACCCCAATGCCGCCGGTCAGGT
391 CATCATGTCCGCA-ACACCCCCTCGGCCCCCCCAATCATCGGAACCCCAATGCCGCCGGTCAGGT
* *
16743873 TCTCCGGCGATGGTGTCCCGATAAAGAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATGAG
455 TCTCCGGCGATGGTGTCCCGATAAAGAAAAATACGGAACCAGCACATGCCCAAGCCTAGCATGAG
16743938 CTATCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGA
520 CTATCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGA
*
16744003 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGACATAGGGG
585 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGACAGAGGGG
* * * *
16744068 CGGGATGCGCAAGCCGGGGATCAGCCAAATCCCCCTTTGCGTGCTACCGATCCTGCTGTAGCAAC
650 CAGGATGCGCAAGCCGGGGATCAGCCAAATCCCCCTCTGCGTGCTACCGATCCTACTGCAGCAAC
16744133 CCTCGATCCCCCCCATCGTCGAAACCCTAATG
715 CCTCGATCCCCCCCATCGTCGAAACCCTAATG
16744165 CCATGCCAATGCCATTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAA
1 CCATGCCAATGCCA-TTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAA
* **
16744230 GTTTTATGGCAAAACGACTCGTTTTCTATTTTTCATGATTTTTGAAA-TTTTTACGGTTCGAGAT
65 GTTTTATGGCAAAACGACTCCTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGAT
* * * * * *
16744294 TTTTTAAAATTTTTTCAGAAGG-ATTTT-TCATCCCAAACTTGGTT-GACGTGATCCTTGTATTT
130 TTTTTAAAATTTTTTCAGAAGGCATTTTGGC--CCCAAACGT-ATTAAACGAGATACTTGTATTT
16744356 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAATTTGTGACCATTTGA
192 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAATTTGTGACCATTTGA
16744421 AAAAAGTGTCACCATTTCAGAAACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGC
257 AAAAAGTGTCACCATTTCAGAAACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGC
16744486 TCTTTAAGGGGGTGTGAGTTC-TGAGG-TTTGATGAGGGATAGGGGGCCAATATAAAAGCCAAGT
322 TCTTTAAGGGGGTGTGAGTTCTTGAGGTTTTGATGAGGGATA--GGG----------AGCCAAGT
* ** * *
16744549 ACCAGCACCGATTGCACATCATGTGCGC-ACACCCCC-CGGTCCCCCCC-ATCATCGGAACCCTA
375 ACCAGCACCCATCACACATCATGTCCGCAACACCCCCTCGG-CCCCCCCAATCATCGGAACCCCA
* * * * *
16744611 ATGCTGCCGGTCAGGTTCTCTGGCGATGGTGTCCCGGTGAAGAAAAATGCGGAACCAGCACATGC
439 ATGCCGCCGGTCAGGTTCTCCGGCGATGGTGTCCCGATAAAGAAAAATACGGAACCAGCACATGC
* * * * * *
16744676 TCAAGCCTAGCATGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCG
504 CCAAGCCTAGCATGAGCTATCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCG
* *
16744741 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGTGCT
569 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * * *** * *
16744806 CAGCCGGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCG
634 CAGCCGGACAGAGGGGCAGGATGCGCAAGCCGGGGATCAGCCAAATCCCCCTCTGCGTGCTACCG
16744871 ATCCTACTGCAGCAACCCTCG
699 ATCCTACTGCAGCAACCCTCG
16744892 GTCTGGTCTG
Statistics
Matches: 654, Mismatches: 56, Indels: 27
0.89 0.08 0.04
Matches are distributed among these distances:
745 15 0.02
746 10 0.02
747 222 0.34
748 93 0.14
754 268 0.41
755 14 0.02
757 32 0.05
ACGTcount: A:0.26, C:0.25, G:0.22, T:0.27
Consensus pattern (746 bp):
CCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAG
TTTTATGGCAAAACGACTCCTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATT
TTTTAAAATTTTTTCAGAAGGCATTTTGGCCCCAAACGTATTAAACGAGATACTTGTATTTTTGT
TGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAATTTGTGACCATTTGAAAAA
AGTGTCACCATTTCAGAAACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTT
TAAGGGGGTGTGAGTTCTTGAGGTTTTGATGAGGGATAGGGAGCCAAGTACCAGCACCCATCACA
CATCATGTCCGCAACACCCCCTCGGCCCCCCCAATCATCGGAACCCCAATGCCGCCGGTCAGGTT
CTCCGGCGATGGTGTCCCGATAAAGAAAAATACGGAACCAGCACATGCCCAAGCCTAGCATGAGC
TATCGCAACCCTCAGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAA
TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGACAGAGGGGC
AGGATGCGCAAGCCGGGGATCAGCCAAATCCCCCTCTGCGTGCTACCGATCCTACTGCAGCAACC
CTCGATCCCCCCCATCGTCGAAACCCTAATG
Found at i:16746091 original size:621 final size:619
Alignment explanation
Indices: 16744886--16746142 Score: 1966
Period size: 621 Copynumber: 2.0 Consensus size: 619
16744876 ACTGCAGCAA
*
16744886 CCCTCGGTCTGG-TCT--GATCTTAGACTAGGAATAAACTCCGTATGCCTAAGCCAACCGACGAA
1 CCCTCGGTCAGGTTCTCCGATCTTAGACTAGGAATAAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * * *
16744948 ACGGGCAGGCGGGCGGGTGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGA
66 ACGGGCAGGCGGGAGGGTGAGCACTACGCCAGCCAGAGAGGCGGGATGCACAAGCCATGGATCAA
* *
16745013 TAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTGGCT
131 TAAGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCT
* *
16745078 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGCTTCATGGCAAGACGACTCGTTTTC
196 TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAACTTCATGGCAAGACGACTCATTTTC
* ** *
16745143 TATTTTTCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTAGAAGGAGTT
261 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTT
* ** * *
16745208 TTGGCCCCAAACCTAGCAGATGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTA
326 TTGACCCCAAACCTAGCAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* * * *
16745273 AAAATTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
391 AAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTATCACCATTTCAGACACTTTAA
* * *
16745338 TGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTTGAGGTT
456 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGCT
* *
16745403 TGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCACGTGTGCAC
521 TGATAAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCACGTGCGCAC
*
16745468 ACCCCCTCGGTCCCCCCCATCGTCGGAACCCTAATG
586 ACCCCCT-GGT-CCCCCCATCGTCGGAACCCCAATG
* * *
16745504 CCACT-GGTCAGGTTCTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGA
1 CC-CTCGGTCAGGTTCTCCGATCTTAGACTAGGAATAAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
16745568 AATGGGCGGGCGGGAGGGTGAGCACTATGTCAGCCAGAGAGGCGGGATGCACAAGCCATGGATCA
65 AACGGGCAGGCGGGAGGGTGAGCACTACGCCAGCCAGAGAGGCGGGATGCACAAGCCATGGATCA
* *
16745633 AT-AGAGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTTCCGTGCCAATGCCATTTTTCTAG
130 ATAAG-GTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAG
* * *
16745697 CTTGTAAATTCATACAATTGTCCCTTAAGCCTTCATGTGAAATTTCATGGTAAGACGACTCATTT
194 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAACTTCATGGCAAGACGACTCATTT
* *
16745762 TCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTTAAGATTTTTTAAAATTTTTTCAGAAGGAG
259 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAG
* * *
16745827 TTTTGACCCCAAACTTAGTAGACATGATCCTTGTATTTTTGTTGGCATGGACAAAAAAATTCAGC
324 TTTTGACCCCAAACCTAGCAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
16745892 TAAAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTATCACCATTTCAGACACTTT
389 TAAAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTATCACCATTTCAGACACTTT
*
16745957 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
454 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGG
* * *
16746022 CTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
519 CTTGATAAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCACGTGCGC
16746087 ACACCCCCTGGTCCCCCCATCGTCGGAACCCCAATG
584 ACACCCCCTGGTCCCCCCATCGTCGGAACCCCAATG
* *
16746123 CCGTCGGTCGGGTTCTCCGA
1 CCCTCGGTCAGGTTCTCCGA
16746143 CGATGGTGTC
Statistics
Matches: 580, Mismatches: 53, Indels: 11
0.90 0.08 0.02
Matches are distributed among these distances:
618 9 0.02
619 44 0.08
620 5 0.01
621 522 0.90
ACGTcount: A:0.27, C:0.22, G:0.23, T:0.29
Consensus pattern (619 bp):
CCCTCGGTCAGGTTCTCCGATCTTAGACTAGGAATAAACTCCGTATGCCTAAGCCAACCGACGAA
ACGGGCAGGCGGGAGGGTGAGCACTACGCCAGCCAGAGAGGCGGGATGCACAAGCCATGGATCAA
TAAGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCCATGCCAATGCCATTTTTCTAGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAACTTCATGGCAAGACGACTCATTTTC
TATTTTTCACGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCAGAAGGAGTT
TTGACCCCAAACCTAGCAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
AAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTATCACCATTTCAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGCT
TGATAAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCACGTGCGCAC
ACCCCCTGGTCCCCCCATCGTCGGAACCCCAATG
Found at i:16746256 original size:26 final size:26
Alignment explanation
Indices: 16746227--16746304 Score: 147
Period size: 26 Copynumber: 3.0 Consensus size: 26
16746217 CGGTCTGATT
*
16746227 TTAGACTGGGAATGAACTTCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
16746253 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
16746279 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
16746305 CTAACTCAAC
Statistics
Matches: 51, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.18, G:0.27, T:0.28
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:16747171 original size:26 final size:26
Alignment explanation
Indices: 16747142--16747194 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16747132 TCGGTCCGAT
*
16747142 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16747168 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16747194 C
1 C
16747195 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16748069 original size:26 final size:26
Alignment explanation
Indices: 16748033--16748083 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
16748023 CCAGTCTGAT
16748033 CTTAGACTGGGAATGAACTCCGTATC
1 CTTAGACTGGGAATGAACTCCGTATC
16748059 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
16748084 GCCTAAGTCA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATC
Found at i:16748512 original size:26 final size:26
Alignment explanation
Indices: 16748483--16748535 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16748473 TCAGTCTGAT
*
16748483 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16748509 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16748535 C
1 C
16748536 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16749394 original size:26 final size:26
Alignment explanation
Indices: 16749365--16749417 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
16749355 GCGGTCCGAT
*
16749365 CTTACACTGGAAATGAACTTCGTATG
1 CTTACACTGGAAATGAACTCCGTATG
* *
16749391 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGAAATGAACTCCGTATG
16749417 C
1 C
16749418 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTACACTGGAAATGAACTCCGTATG
Found at i:16751147 original size:26 final size:26
Alignment explanation
Indices: 16751118--16751196 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
16751108 CTGATCCGAT
16751118 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16751144 CTTAGACTGGGAATGAACTCCGTATT
1 CTTAGACTGGGAATGAACTCCGTATG
16751170 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16751196 C
1 C
16751197 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16752069 original size:26 final size:26
Alignment explanation
Indices: 16752033--16752085 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16752023 CTGATCCGAT
*
16752033 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16752059 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
16752085 C
1 C
16752086 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:16752969 original size:26 final size:26
Alignment explanation
Indices: 16752933--16752985 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
16752923 CTGATCCAAT
*
16752933 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16752959 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16752985 C
1 C
16752986 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16753664 original size:883 final size:881
Alignment explanation
Indices: 16748480--16754731 Score: 8010
Period size: 883 Copynumber: 7.0 Consensus size: 881
16748470 GATTCAGTCT
*
16748480 GATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
1 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * * *
16748545 CCCACGAAACGAGC-AGCGGGCGCTCAGCTGGCTAGAGGGGCGAGATGCGCAAGCCGTAAATCGG
66 CCCACGAAACGAGCGTGCGGGCGCTCAGC-GGCCAGAGGGGCGGGATGCGTAAGCCGGAGATCGG
* * * * * * * * * *
16748609 CCTGGTCCCCCTCTGTGTTCTACCGATGCTACTACCGTAACCTTCGGTCTGGTCTGATCTTAGAC
130 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGAC
* * * *
16748674 TGGGAATGAACTCCGTATGCCTAAACTAACTGACGAAATAGGCGGACGGGCGGGTGGGCGGGTGG
195 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA-A--C-GA--GGC--G-AGGC----GG
* * * * *
16748739 GCACTACGTCGGCCAAAGAGGCGGGACGCGCAAGCCGTGGATCGATAGGGTGGTAGGTCGATTTA
246 GCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
16748804 GGCACATCTTCATA-TT-----T--C--TG-C--TTTTCTGGCTTGTAAATTCATACAATGGTCC
311 GGCACATCTTCATATTTCGCCATGCCAATGCCTTTTTTCTGGCTTGTAAATTCATACAATGGTCC
* * * *
16748856 CCTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTTGTTTTCTAGTTTTCACGATTTTTGAAG
376 CTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * *
16748921 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAAGAGTTTTT-TCCCCAAACTTGGTAGA
441 CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGA-TTTTTGGCCCCAAACTTGGTAGA
* * *
16748985 CGTGATCCTTGTATTTTTTTTAGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
505 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
16749050 TTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCT
570 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
16749115 GTAAAATCTCAAATGCACTTTAATGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
635 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
* * *
16749180 ATATAAGGACCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGTCCCCCCCATT
700 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGTCCCCCCGATC
* ** *
16749245 GCCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGGTGTCCCGGTGAAGAAAAATGTGAC
765 GCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGC
*
16749310 ACCAGCACATGCCCGAGCCCAGCATGT-CTTGCCGCAACCCTCGGTGC-GGTCC
830 ACCAGCACATGCCCGAGCCCAGCATGTGC-TGCCGCAACCCTCGGT-CTGATCC
* * *
16749362 GATCTTACACTGGAAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
1 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
** * *
16749427 CCCACGAAATAAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
66 CCCACGAAACGAGCGTGCGGGCGCTCAG-CGGCCAGAGGGGCGGGATGCGTAAGCCGGAGATCGG
* * * * * * * *
16749492 TCGGGTCCCCCTCTGTGTGCTGTCGATCCTACTACTGCAACCCTCAATCCGAT-TCAATCTTAGA
130 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCT-GATCTTAGA
** * * * *
16749556 CTGGGAATGAACTTTGTATGCCTAAGCCAACCGATGAAACGGGCGGGCGGGTTGGCGAGCACTAC
194 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC--G-AGGC--G-AGGCGGGCACTAC
* * * *
16749621 GTCGGCC-GAGAGGCGGGATGCGCAAGCCATGGATCAATAGGGTGGTAGGTGGGTTTAGGCAAAT
253 GCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *
16749685 CTTCATATTTTTGCCATGCCAATGCCATTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG
318 CTTCATA-TTTCGCCATGCCAATGCCTTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
16749750 CCTTCATGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTTACGATTTTTGAAACTTTTT
382 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
* *
16749815 ACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATC
447 ACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATC
* * * *
16749880 CCTGTATTTTTGTTGGCATGCACAAAAAAATTTACCTAAAAACTCGAAGTGAACAAGATTTTGTG
512 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
*
16749945 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAAT
577 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * * * *
16750010 ATCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTCTGATGAGGGATAGGGGACCAATATAAG
642 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * * * *
16750075 GGCCAAGTACCAGCACCAATCGCACATCATGCGCGCACAACCCTCTGGTCCCGCTC-ATCGCCGG
707 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCGGTCCC-CCCGATCGCCGG
* * * * ** *
16750139 AACCCCAATGCCGTCGGTCAGGTTCTCGGATGATGTTGTCCCGGTGAAGAAAAATGTGACACCAG
770 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAG
* * *
16750204 CACATGCTCGAGCCCAGCATGTGCTACCACAA-CC-C--TC-G----
835 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
*
16750242 G----T---CT-GG--T----T-CG-AT-CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAA
1 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * **
16750290 CCCACGAAACGAGCTTGCGGGCGCTCAGCTGGCC-GAGGGGTGGGATGCGTAAGCTGGGGATCTA
66 CCCACGAAACGAGCGTGCGGGCGCTCAGC-GGCCAGAGGGGCGGGATGCGTAAGCCGGAGATCGG
* * *
16750354 CCGGGTCCCCCTTTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTTCGGTCTGATCTTAGAT
130 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGAC
* *
16750419 TGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGGGCGGGCGGGCGGACGGGCGGGCAC
195 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA----C--G-AGGC-GA--GGCGGGCAC
* * *
16750484 TATGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGGATTTAGGCA
250 TACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* * *
16750549 TATCTTCATATTTCTGCCATGTCAATGCCATTTTTT-TGGCTTGCAAATTCATACAATGGTCCCT
315 CATCTTCATATTTC-GCCATGCCAATGCC-TTTTTTCTGGCTTGTAAATTCATACAATGGTCCCT
16750613 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT
378 TAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT
* * * * * *
16750678 TTTTACGGTTTGGGATTTTTTAAAATTTCTTCAGAAGGAGTTTTGGCCCCAAACATGATAGATGT
443 TTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGT
16750743 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
508 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* **
16750808 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTACA
573 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
16750873 AAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATA
638 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATA
*
16750938 TAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGGTCCCCCC-ATCGCC
703 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGTCCCCCCGATCGCC
* *
16751002 GGAACCGCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATATGGCACC
768 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACC
*
16751067 AGCACATG-CCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGATCC
833 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
16751115 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATTCTTAGACTGG
1 GATCTTAGACTGGGAATGAA---C---T-C-----C---G--T--A-T--G----CTTAGACTGG
* * * * *
16751180 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGAGCGCTCAGTCGACCAGAAG
40 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CGGCCAGAGG
* * * *
16751245 GGCGGGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCACA
104 GGCGGGATGCGTAAGCCGGAGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCA
* ** ** * *
16751310 ACCTTTGGTGTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAC
169 ACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
** ** * * *
16751375 GGGCAGGCGGACGGGCGGGCACTATACCGGTAAGA-ATGGCGGGAAGCGCATGTCGTGGATCGAT
234 --G-AGGC-GA--GGCGGGCACTACGCCGGCCAGAGA-GGCGGGATGCGCAAGCCGTGGATCGAT
* *
16751439 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTCATGCCAATGCCGTTTTTCTGGCTT
292 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-GCCATGCCAATGCCTTTTTTCTGGCTT
* * * * *
16751504 GTGAATTCATACCATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCTTTTTTT
356 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* ** * *
16751569 ATTTTTCATGATTTTTGAAACTTTTTACAATTCGAGATTTTTTAAAATTTTTTCAGAAAGATTTT
421 ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTT
*
16751634 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAA
486 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
*
16751699 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAT
551 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * * *
16751764 GGCTGCTGGCAGCAAACCTGCAAAATCTCTAATGCTCTTTAAGGGTGTGTGAGTTCTTGAGGTTT
616 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
16751829 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
681 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * * * *
16751894 CCCCCCGGTCCCCCCCATCACCGGAACCCCAATGTCGTCGGACACGTTCTCCGACGATGGTATCC
746 CCCCCCGGTCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCC
* * * * *
16751959 CAACGAAGAAAAATGCT-GCACCAACACATGCCCGAGCCCAACTTGTGCTGCCGCAACCATCGGT
811 CGACGAAGAAAAATG-TGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
16752023 CTGATCC
875 CTGATCC
* * *
16752030 GATCTTAGACTAGGAATGAACTTCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAA
1 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * *
16752095 CCCTCGAAATGAGCGTGCGGGCGCTAAGCCGGCCAGAGGGGCGGGATGCGTAAGCC-GAGGATCG
66 CCCACGAAACGAGCGTGCGGGCGCTCAG-CGGCCAGAGGGGCGGGATGCGTAAGCCGGA-GATCG
* * ** * * * * *
16752159 ACCAGGTCCCCCTCTATGTGCTACCGATCCTGCTACTGCAACTCTC-GATCTGGTCCGATCTTAG
129 GCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAG-TCCGGTCTGATCTTAG
* *
16752223 AATGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGGGCAGGAGGGCGGGCAGGCGGGC
193 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA----C--GA-GGC--G-A----GGC
* *
16752288 GGGCACTACGCCGGCCAGAAAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTT
244 GGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* *
16752353 TAGGCACATCTTCATATTTCTATCC-GGCCAATGCCATTTTTT-TGGCTTGTAAATTCATACAAT
309 TAGGCACATCTTCATATTTC--GCCATGCCAATGCC-TTTTTTCTGGCTTGTAAATTCATACAAT
* *
16752416 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAATCGTTTTCTATTTTTCATGATTTT
371 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
16752481 TGAAACTTTTTATGGTTCGGGAATTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACCTGG
436 TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGG
* *
16752546 TAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
501 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
16752611 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
566 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
16752676 ACCTCG-AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGG
631 ACCT-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGG
*
16752740 GGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCCCACGG-CCC
695 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGTCCC
* * *
16752804 CCTTCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGACGGTGTCCCGACGAAGAA
758 CC--CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAA
* * *
16752869 AAATGTGGCGCCAGCACATGCCCGAGCCCAACATGTGCAGCCGCAACCCTCGGTCTGATCC
821 AAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
* *
16752930 AATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
1 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * *
16752995 CCCACGAAACGAGCGTGCGGGCGCTCAGCAGGCCAGAGGGGTGGGATGCGCAAGTCGGAGATCGG
66 CCCACGAAACGAGCGTGCGGGCGCTCAGC-GGCCAGAGGGGCGGGATGCGTAAGCCGGAGATCGG
* * *
16753060 CCAGGTCCCCCTCTACGTGCTGTCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGAC
130 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGAC
* * * *
16753125 TAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGA-GC-AGGCGAGCACTACGTC-GCC
195 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGGCGGGCACTACGCCGGCC
* **
16753187 TAGAGAGGCGGGATACGCAAGTTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
260 -AGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * *
16753252 ATATTCGCCGTGCCAATGCCTTTTTTCTAGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTTCA
324 AT-TTCGCCATGCCAATGCCTTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * ** **
16753317 TGTGAAATTTCATGGCAAGATGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTGTGGTT
388 TGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTT
* ** *
16753382 CGGGATTTTTT-TAATTTTTTCAGAAGGATTTTTCACCCCAAACTTGGTAGACATGATCCTTGTA
453 CGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* * *
16753446 TTTTTTTTGGCATGCTCAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
518 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * * *
16753511 TGAAAAAAGTGTCCCTATTTCAGAAACTTTAATGGCTATTGACAGCAAACCTGTAAAATCTCAAA
583 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
* * * * *
16753576 TTCTCTTTAAGGGGGTGTGAGTTCTTGAGGTATGATGAGGTATAAGGGGCCAATGTAAGGGCCAA
648 TGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* *
16753641 GTACCAGCACCCATCGCACATCATGTGCGCACACCCTCCCTCGTCCCCCCCGATCGCCCGAACCC
713 GTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCC-GGT-CCCCCCGATCGCCGGAACCC
* * * * * *
16753706 CAATGCCGTCGGACAAGTTCTCCGATGATGGTGTCCC-AGCGAAGAAAAATATGGCACCAGCTCA
775 CAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGA-CGAAGAAAAATGTGGCACCAGCACA
* * * *
16753770 TGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCT
839 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
*
16753813 GATCTTAGACTGAGAATGAACTCCGTATGCTTAGACTGGGAATGAACAT-CGTATGCCTAAGTCA
1 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGTCA
* * * * *
16753877 ACCCACGAAACGAGCATGCGGGCGCTCAGCTAGCCAAAGGGGCGAGATGCGTAAGCCGGTGATCG
65 ACCCACGAAACGAGCGTGCGGGCGCTCAGC-GGCCAGAGGGGCGGGATGCGTAAGCCGGAGATCG
* * ** *
16753942 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTTGGTCCAGTCTGATCTTAGA
129 GCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGA
* *
16754007 CCGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCGCTAC
194 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---GGC--G-AGGCGGGCACTAC
* * * *
16754072 ACCGACCAGAGAGGCGAGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
253 GCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * * *
16754137 CTTCATATTTTTGCCATGCCAATGCCATTTCTCTGGCTTGTAAATTCATACAATGGTCCCCTAAG
318 CTTCATA-TTTCGCCATGCCAATGCCTTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
16754202 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTTTAATTTTCAGGATTTTTGAAACTTTTT
382 CCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
* *
16754267 ACGGTTCGGAATTTTTTAAAATTTTTTCAGAAGGAGTTTTT-GTCCCAAACTTGGTAGACGTGAT
447 ACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGA-TTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * *
16754331 CCTTGTATTTTTGTTGGCGTGCACAAATAAATTCAGCTAGAAATTCGAAGTGTACAAGATTTTGT
511 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
16754396 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTATAAAA
576 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
*
16754461 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAAGATAA
641 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * * * **
16754526 GGGCCAAGTACCAGCACCCATCGCGCATCATGCGCGCGCACCCCCCGGCCACCCCCGATCGTTGG
706 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGTC-CCCCCGATCGCCGG
** *
16754591 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGG-GTCCCGGTGAAGAAAAATGCGGCACCAG
770 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAG
* * * *
16754655 CACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGATCTCATCT
835 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
*
16754702 GATCTTACACTGGGAATGAACTCCGTATGC
1 GATCTTAGACTGGGAATGAACTCCGTATGC
16754732 CTAAGTCAAC
Statistics
Matches: 4739, Mismatches: 490, Indels: 275
0.86 0.09 0.05
Matches are distributed among these distances:
862 112 0.02
863 65 0.01
864 23 0.00
865 78 0.02
866 41 0.01
867 444 0.09
868 7 0.00
869 1 0.00
870 1 0.00
872 1 0.00
873 3 0.00
874 57 0.01
875 15 0.00
876 3 0.00
877 1 0.00
879 11 0.00
880 5 0.00
881 4 0.00
882 82 0.02
883 710 0.15
884 193 0.04
885 11 0.00
886 1 0.00
887 7 0.00
888 368 0.08
889 372 0.08
890 47 0.01
891 197 0.04
892 260 0.05
893 13 0.00
894 4 0.00
895 2 0.00
896 1 0.00
897 459 0.10
898 19 0.00
899 5 0.00
900 310 0.07
901 3 0.00
903 2 0.00
908 1 0.00
909 2 0.00
912 7 0.00
913 490 0.10
914 67 0.01
915 56 0.01
916 62 0.01
917 116 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (881 bp):
GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
CCCACGAAACGAGCGTGCGGGCGCTCAGCGGCCAGAGGGGCGGGATGCGTAAGCCGGAGATCGGC
CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACT
GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGGCGGGCACTACGCCGGCCA
GAGAGGCGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
TTCGCCATGCCAATGCCTTTTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGT
GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGTCCCCCCGATCGCCGGAACCCCAATGC
CGCCGGTCAGGTTCTCCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGA
GCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
Found at i:16753845 original size:26 final size:26
Alignment explanation
Indices: 16753816--16753868 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
16753806 CCGGTCTGAT
16753816 CTTAGACTGAGAATGAAC-TCCGTATG
1 CTTAGACTGAGAATGAACAT-CGTATG
*
16753842 CTTAGACTGGGAATGAACATCGTATG
1 CTTAGACTGAGAATGAACATCGTATG
16753868 C
1 C
16753869 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACATCGTATG
Found at i:16755042 original size:326 final size:326
Alignment explanation
Indices: 16754429--16755067 Score: 926
Period size: 326 Copynumber: 2.0 Consensus size: 326
16754419 ATTTCAGACA
* *
16754429 CTTTAATGGCTATTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTT
1 CTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
16754494 GAGGTTTGATGAGGGATAGGGGGCCAAGATAAGGGCCAAGTACCAGCACCCATCGCGCATCATGC
66 AAGGTTTGATGAGGGATAGGGGGCCAAGATAAGGGCCAAGTACCAGCACCCATCGCACATCATGC
* *** *
16754559 GCGCGCACCCCCCGGCCACCCCCGATCGTTGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
131 GCGCACACCCCCCGGCCACCCCCGATCGCCAGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGA
16754624 TGGGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACC
196 TGGGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACC
* *
16754689 CTCGATCTCATCTGATCTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACGCACGCTCGTAC
261 CTCGATCTCATCTGATCTCACACTGGGAATGAACTCCGTACGCCTAAGTCAACGCACGCTCGTAC
16754754 T
326 T
* *
16754755 CTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
1 CTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * *
16754820 AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCTTGT
66 AAGGTTTGATGAGGGATAGGGGGCCAAGATAAGGGCCAAGTACCAGCACCCATCGCACATCATGC
* * * *
16754885 GCGCACACCCCCTGGCC-CCCCCGATCGCCAGAACCCTAATGCCGTCAGTTAGGTTCTCCGACGA
131 GCGCACACCCCCCGGCCACCCCCGATCGCCAGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGA
* * * * * * *
16754949 T-GATGCCTCGGTGATGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGTTGTCGCAA
196 TGGGT-CC-CGGTGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAA
** * *
16755013 CCCTCTG-TCTGGTC-GAATCTCAGACTGGGAATGAACTTCGTACGCCTAAGTCAAC
259 CCCTC-GATCTCATCTG-ATCTCACACTGGGAATGAACTCCGTACGCCTAAGTCAAC
16755068 CCATGAAACG
Statistics
Matches: 277, Mismatches: 32, Indels: 8
0.87 0.10 0.03
Matches are distributed among these distances:
324 2 0.01
325 44 0.16
326 230 0.83
327 1 0.00
ACGTcount: A:0.24, C:0.29, G:0.25, T:0.22
Consensus pattern (326 bp):
CTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
AAGGTTTGATGAGGGATAGGGGGCCAAGATAAGGGCCAAGTACCAGCACCCATCGCACATCATGC
GCGCACACCCCCCGGCCACCCCCGATCGCCAGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGA
TGGGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACC
CTCGATCTCATCTGATCTCACACTGGGAATGAACTCCGTACGCCTAAGTCAACGCACGCTCGTAC
T
Found at i:16757612 original size:897 final size:882
Alignment explanation
Indices: 16755034--16757909 Score: 3421
Period size: 892 Copynumber: 3.2 Consensus size: 882
16755024 GTCGAATCTC
* * * * * * ** *
16755034 AGACTGGGAATGAACTTCG-TACGCCTAAGTCAACCCATGAAACGGGCGTGCAGGCACTCAGCCG
1 AGACTAGGAATGAACTCCGCTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCA-CTG
* * * ** * ** *
16755098 GCCAAAGGGGCGGGATGCGCAAGCTGGGGATCGACCGGGTCTTC-CTCTATGTGCTGTCGATCCT
65 GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTC-CCACTCTGCGTGCTGCCGATCCT
** * ** ** * * *
16755162 ACTGTCACAACCCTTGGTCCAGTTCGATCTTGGACTGGGAATGAACTCCGTATGCCTAAGCCAAT
129 ACTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAC
* * * *
16755227 TGATGAAACGAGCGGGCGGGCGGGTGGGCACTACGCCGGGCAGAGAGGCGGGATGCTCAAGCCGT
194 TGACGAAACGAGCGGGCGGGCGGGAGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGT
* * *
16755292 GGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTATG-CA-GCACCAATACCATT
259 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATG--CCAATGCCATT
* *
16755355 TTTCTGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAAACGA
322 TTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
* ** *
16755420 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCA
387 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAATTCAAGATTTTTTAAAATTTTTTTA
* * *
16755485 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCGCAAAAAA
452 GAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
*
16755550 ATTCAGCTAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAA
517 ATTCAG-TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAA
16755615 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
581 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
16755680 CTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGGACCCATCGCACATCA
646 C-TGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTAC-AGCACCCATCGCACATCA
* *
16755745 TGTGCGCACAGCCCCGTCCGGCCCCCCCGATCGCCGGAACCCCAATGTCGTCGGTCAGGTTCTCC
709 TGTGCGCACA-CCCC--CCAGCCCCCCCGATCG-CGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* ** * * *
16755810 GGCGATGGTGTCCCAGCAAAGAAAAATGCGGCACCAGTAGATGTCCGAGCCCAGCATGTGCTACC
770 GGCGATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCC
** * * * * * *
16755875 TTAACCCTCGGTCCAGTTTGATCGTAGGCTGGGAACGAACTTCATATGCTT
834 GCAACCCTCGGT-CGGTCTGATC-TTGACTGGGAATGAACTCCATATGCTT
* * * * *
16755926 AGACTGGGAATGAACTCTG-TATGCCTAAGTCAACCCATGAAACGAGTGTGCGGGTGCTCAGTCG
1 AGACTAGGAATGAACTCCGCTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCACT-G
* * * ** * * * **
16755990 ACCAGAGGGGCAGGATGCGTAAGCCGAGGATCGACCGTGTCCAACTCTGCGTGCTGTCGATCCGG
65 GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCACTCTGCGTGCTGCCGATCCTA
* *
16756055 CTACCGCAACCCTCAATTTGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA-T
130 CTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACT
* * * * *
16756119 CAACGAATTCGATGC-GGTGGGCGGGCGGGCACTAACGTCGGGCCAGA-AGGCGGGATGCGCAAG
195 -GACGAA-ACGA-GCGGGCGGGCGGGAGGGCACT-ACG-CCGGCCAGAGAGGCGGGATGCGCAA-
16756182 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCGCACATC-TCATATTTTTGCCATGCCAATGC
254 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG-GCACATCTTCATATTTTTGCCATGCCAATGC
*
16756246 CATTTTTTCTGTCCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTTCATGGC
318 CA-TTTTTCTG-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAG-TTTCATGGC
*
16756311 AATGAC-ACTCGTTTTTTATTTTTCCACGAATTTTCCAAAACTTTTTACGAATTCAAGAATTTTT
380 AA-GACGACTCGTTTTCTATTTTT-CACG-ATTTT-CAAAACTTTTTAC-AATTCAAG-ATTTTT
* *
16756375 TATAATTTTTTTCAGAAGGA-TTTTGG-CCCAAACTTGGTAGATG-GAATCCCTTTTA-TTTTTT
439 TAAAATTTTTTT-AGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTG-AT-CCTTGTATTTTTTT
* * * *
16756436 AGGCATGCATAAAAAAATTCAGTAAAAAATCG-A-TGTACAAGATTTTGTGATCATTT-AAAAAA
501 TGGCATGCACAAAAAAATTCAGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
** *
16756498 -TGTCCCCATTTCAAGACAACTTTAAATGGCTACTGATAGCAAA-CTGTAAAATCTAAAAATGGC
566 GTGTCCCCATTTCAA-AC-ACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCT-CAAAT-GC
*
16756561 TCTTTAAGGGGGTGTGAGTTCATGAGGTTTGATGA-GGA-AAGGGG-GACATATAAGGGCCAAGT
626 TCTTTAAGGGGGTGTGAGTTC-TGAGGTTTGATGAGGGATAAGGGGCCA-ATATAAGGGCCAAGT
* *
16756623 ACCAGCACCCATCCGCAACATCATGTGGGCACA-----CA--TCCCCCGATTCGCAGGAA-CCCA
689 A-CAGCACCCAT-CGC-ACATCATGTGCGCACACCCCCCAGCCCCCCCGA-TCGC-GGAACCCCA
* * * * *
16756680 ATGCC-TGCTGGTTCAGCGTTCTCCGACGGTGGTGTCTCGGTGAAGAAAAAATACATGCACCAAG
749 ATGCCGT-C-GG-TCAG-GTTCTCCGGCGATGGTGTCCCGGTGAAG-AAAAATGC-GGCACC-AG
* *
16756744 CA-ATGCCCAGAGCCAAGCATGTTGCTGCCGCATACCCTCGGCTGCGGTCCGATCTTGACTGGGA
807 CACATG-CC-GAGCCCAGCATG-TGCTGCCGCA-ACCCTCGG-T-CGGTCTGATCTTGACTGGGA
*
16756808 ATGAACTCCCTATGCTT
866 ATGAACTCCATATGCTT
* * * *
16756825 ATACTAGGAATGAACTCCGCTTATACCT-AGTTCAACCCACGAAAACGAGCATACGGGTGCTCAA
1 AGACTAGGAATGAACTCCGC-TATGCCTAAG-TCAACCCACG-AAACGAGCGTGCGGGTGCTC-A
* * * * *
16756889 CTGGCCAGAGGGGCGGGATAG-GCAAGCCAAGGATCGGTCGGGCCCCCCTCTACGTGCTACCGAT
62 CTGGCCAGAGGGGCGGGAT-GCGCAAGCCGAGGATCGGTCGGGTCCCACTCTGCGTGCTGCCGAT
** * * * * * *
16756953 CCTACTGTCGTAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCTGTATACCTAAGCC
126 CCTACTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCC
* * *
16757018 AACTGACGAAACGAGCGGGCGGGCGGGAGGGCACTATGCCTGCCAGAGAGACGGGATGCGCAAGC
191 AACTGACGAAACGAGCGGGCGGGCGGGAGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGC
* * *
16757083 CATGGTTCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCAT
256 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCAT
*
16757148 TTCTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
321 TTTTCTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACG
** *
16757213 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACTATTCAAGATTTTTTAAAATTTTTTT
386 ACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAATTCAAGATTTTTTAAAATTTTTTT
*
16757278 AGAAGGAGTTTTGGCCCCAAACTTGGAAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
451 AGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
* *
16757343 AATTCAGTTAAAAACTAGAAGTGTACAAGA-TTTGCTGACCATTTGAAAAAAGAGTCCCCATTTC
516 AATTCAG-TAAAAACTCGAAGTGTACAAGATTTTG-TGACCATTTGAAAAAAGTGTCCCCATTTC
*
16757407 AAACACTTTAATGGCTACTGGCAGCAAACCTGTCAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
579 AAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
16757472 TTCTCAAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACAGCACCCATCGCACATC
644 TTCT-GAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACAGCACCCATCGCACATC
*
16757537 ATGTGCGCACACCCCCCCAGCCCCCCCGGTCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
708 ATGTGCGCACA-CCCCCCAGCCCCCCCGATCG-CGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
16757602 GCGATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCG
771 GCGATGGTGTCCCGGTGAAGAAAAATGCGGCACCAGCACATGCC-GAGCCCAGCATGTGCTGCCG
* * **
16757667 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGACTGAACTCCGTATAATT
835 CAACCCTCGGTC-GGTCTGATCTT-GACTGGGAATGAACTCCATATGCTT
* * * *
16757717 AGATTAGGAATGAACTCCAC-ATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCTACTG
1 AGACTAGGAATGAACTCCGCTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTC-ACTG
* * * * *
16757781 GCCAGAGGGGCGGGTTGCGCAAGCCGGGGATCGGTCGGGTCCCTCTCTGCATGCTGCCAATCCTA
65 GCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCACTCTGCGTGCTGCCGATCCTA
** * * *
16757846 CTACCGCAACCCTTGGTCCGGTTTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAAC
130 CTACCGCAACCCTCAGTCTGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAC
16757910 CAATGCCTAA
Statistics
Matches: 1688, Mismatches: 209, Indels: 177
0.81 0.10 0.09
Matches are distributed among these distances:
888 1 0.00
889 125 0.07
890 24 0.01
891 60 0.04
892 282 0.17
893 91 0.05
894 102 0.06
895 133 0.08
896 70 0.04
897 150 0.09
898 63 0.04
899 189 0.11
900 79 0.05
901 108 0.06
902 172 0.10
903 32 0.02
904 7 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (882 bp):
AGACTAGGAATGAACTCCGCTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCACTGG
CCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCACTCTGCGTGCTGCCGATCCTAC
TACCGCAACCCTCAGTCTGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACTG
ACGAAACGAGCGGGCGGGCGGGAGGGCACTACGCCGGCCAGAGAGGCGGGATGCGCAAGCCGTGG
ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCCATGCCAATGCCATTTTTC
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCG
TTTTCTATTTTTCACGATTTTCAAAACTTTTTACAATTCAAGATTTTTTAAAATTTTTTTAGAAG
GAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
AGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTGAG
GTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACAGCACCCATCGCACATCATGTGCGC
ACACCCCCCAGCCCCCCCGATCGCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGT
CCCGGTGAAGAAAAATGCGGCACCAGCACATGCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
CGGTCTGATCTTGACTGGGAATGAACTCCATATGCTT
Found at i:16758098 original size:210 final size:210
Alignment explanation
Indices: 16757736--16758120 Score: 538
Period size: 210 Copynumber: 1.8 Consensus size: 210
16757726 ATGAACTCCA
* * * *
16757736 CATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCTACTGGCCAGAGGGGCGGGTTGCGC
1 CATGCCTAAGTCAACCCACGAAACGAACGTGCGAGCGCTCTACCGGCCAAAGGGGCGGGATGCGC
* ** * * * *
16757801 AAGCCGGGGATCGGTCGGGTCCCTCTCTGCATGCTGCCAATCCTACTACCGCAACCCTTGGTCCG
66 AAGCCGAGGATCGACCGAGTCCCCCTCTACATGCTGCCAATCCTACTACCACAACCCTTGGTCCG
*** *
16757866 GTTTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCAATGCCTAAACCCTCTCGCT
131 GTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCAATGCCTAAACCCTCTCGCT
16757931 CGCTCGTTTCATTGG
196 CGCTCGTTTCATTGG
* * *
16757946 CATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTC-AGCCGGCTAAAGGGGTGGGATGCG
1 CATGCCTAAGTCAACCCACGAAACGAACGTGCGAGCGCTCTA-CCGGCCAAAGGGGCGGGATGCG
* * * * *
16758010 CAAGCCGAGGATCGACCGAGTCCCCCTCTACGTGCTGCCGATCTTACTGCCATAACCCTTGGTCC
65 CAAGCCGAGGATCGACCGAGTCCCCCTCTACATGCTGCCAATCCTACTACCACAACCCTTGGTCC
*
16758075 GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
130 GGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACC
16758121 GACGAAACGA
Statistics
Matches: 150, Mismatches: 24, Indels: 2
0.85 0.14 0.01
Matches are distributed among these distances:
209 1 0.01
210 149 0.99
ACGTcount: A:0.22, C:0.32, G:0.26, T:0.21
Consensus pattern (210 bp):
CATGCCTAAGTCAACCCACGAAACGAACGTGCGAGCGCTCTACCGGCCAAAGGGGCGGGATGCGC
AAGCCGAGGATCGACCGAGTCCCCCTCTACATGCTGCCAATCCTACTACCACAACCCTTGGTCCG
GTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCAATGCCTAAACCCTCTCGCT
CGCTCGTTTCATTGG
Found at i:16758807 original size:26 final size:26
Alignment explanation
Indices: 16758778--16758830 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
16758768 CCAGTCTGAT
*
16758778 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
16758804 CTTAGACTGGGAATGAATTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
16758830 C
1 C
16758831 CTAAGTCAAA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:16760692 original size:16 final size:16
Alignment explanation
Indices: 16760668--16760730 Score: 56
Period size: 16 Copynumber: 3.9 Consensus size: 16
16760658 GGATTTTTTT
*
16760668 AGGACTTTGGATTTCA
1 AGGATTTTGGATTTCA
*
16760684 AGGATTTTGGATTTCGG
1 AGGATTTTGGATTTC-A
* * *
16760701 GGGGTTTTCGATTT-A
1 AGGATTTTGGATTTCA
16760716 ATGGATTTTGGATTT
1 A-GGATTTTGGATTT
16760731 TTAGGGGTTT
Statistics
Matches: 36, Mismatches: 9, Indels: 4
0.73 0.18 0.08
Matches are distributed among these distances:
16 25 0.69
17 11 0.31
ACGTcount: A:0.19, C:0.06, G:0.30, T:0.44
Consensus pattern (16 bp):
AGGATTTTGGATTTCA
Found at i:16760738 original size:33 final size:33
Alignment explanation
Indices: 16760677--16760741 Score: 87
Period size: 33 Copynumber: 2.0 Consensus size: 33
16760667 TAGGACTTTG
*
16760677 GATTTCAAGGATTTTGGATTTCGGGGGGTTTTC
1 GATTTCAAGGATTTTGGATTTCGAGGGGTTTTC
**
16760710 GATTT-AATGGATTTTGGATTTTTAGGGGTTTT
1 GATTTCAA-GGATTTTGGATTTCGAGGGGTTTT
16760742 AGAATCCTAG
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
32 2 0.07
33 26 0.93
ACGTcount: A:0.17, C:0.05, G:0.31, T:0.48
Consensus pattern (33 bp):
GATTTCAAGGATTTTGGATTTCGAGGGGTTTTC
Found at i:16762177 original size:8 final size:8
Alignment explanation
Indices: 16762164--16762213 Score: 64
Period size: 8 Copynumber: 5.9 Consensus size: 8
16762154 CTTATTTTCG
16762164 TTTTGTTT
1 TTTTGTTT
16762172 TTTTGTTT
1 TTTTGTTT
*
16762180 GTTGTTTTTT
1 -TT-TTGTTT
16762190 TTTTGTTT
1 TTTTGTTT
16762198 TTTTGTTT
1 TTTTGTTT
16762206 GTTTTGTT
1 -TTTTGTT
16762214 AAATATTATT
Statistics
Matches: 37, Mismatches: 2, Indels: 5
0.84 0.05 0.11
Matches are distributed among these distances:
8 21 0.57
9 11 0.30
10 5 0.14
ACGTcount: A:0.00, C:0.00, G:0.16, T:0.84
Consensus pattern (8 bp):
TTTTGTTT
Found at i:16762180 original size:12 final size:12
Alignment explanation
Indices: 16762165--16762210 Score: 65
Period size: 12 Copynumber: 3.7 Consensus size: 12
16762155 TTATTTTCGT
16762165 TTTGTTTTTTTG
1 TTTGTTTTTTTG
*
16762177 TTTGTTGTTTTTTT
1 TTTG-T-TTTTTTG
16762191 TTTGTTTTTTTG
1 TTTGTTTTTTTG
16762203 TTTGTTTT
1 TTTGTTTT
16762211 GTTAAATATT
Statistics
Matches: 30, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
12 18 0.60
13 2 0.07
14 10 0.33
ACGTcount: A:0.00, C:0.00, G:0.15, T:0.85
Consensus pattern (12 bp):
TTTGTTTTTTTG
Found at i:16762452 original size:49 final size:49
Alignment explanation
Indices: 16762385--16762917 Score: 672
Period size: 49 Copynumber: 10.9 Consensus size: 49
16762375 AAAAAAAAGG
* *
16762385 GCTCCTCTTAACAGAGGCTCAACAACTTTAAAAATCTCATCTGGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
*
16762434 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTC-T-TGAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
16762481 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGG-AAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
** **
16762529 GCTCCTCTCAGGAGAGGCTTAACAACTTT-AAAATCTCATCTGGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
*
16762577 GCTCCTCTCAACAGAGGCTCCACAACTTT-AAAATCTCATCTTGAAAAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATC-TG---GAAAAA
** *
16762629 GCTCCTCTCAGTAGAGGCTCCACAACTTTAAAAATTCTC-TCTTGAAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATC-TGGAAAAA
* * * * * *
16762679 ACTTCTCTTAGCAGAGGTTCCATAACTTTAAAAATCTCATCT-GAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
* *
16762727 GCTCCTCTCAACAGAGGCTCCATAACTTTAAAAATTCTC-TCTTGAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTGGAAAAA
* * *
16762776 GCTCCTCTCAACAGAGGCTCGATAACTTTAAAATTCTCATCTTGG-AAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATC-TGGAAAAA
* * *
16762825 GCTCCTCTTAATAGAGGCTCAACAACTTTAAAAATTCTCATCT-GAAAAA
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAA-TCTCATCTGGAAAAA
*
16762874 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAATTTCTCATCTG
1 GCTCCTCTCAACAGAGGCTCCACAACTTTAAAA-ATCTCATCTG
16762918 TTTTCAAATT
Statistics
Matches: 427, Mismatches: 39, Indels: 35
0.85 0.08 0.07
Matches are distributed among these distances:
47 59 0.14
48 113 0.26
49 165 0.39
50 45 0.11
52 32 0.07
53 9 0.02
54 4 0.01
ACGTcount: A:0.36, C:0.26, G:0.12, T:0.27
Consensus pattern (49 bp):
GCTCCTCTCAACAGAGGCTCCACAACTTTAAAAATCTCATCTGGAAAAA
Done.