Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168161.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28887

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7287--10317
875
3.5
873
87
4
4059
25
23
24
26
2.00
10620--11218
156
3.8
156
96
2
1081
38
18
14
29
1.90
11217--11298
17
4.8
17
80
5
85
76
7
3
12
1.11
11269--11309
1
41.0
1
92
0
55
92
2
0
4
0.44
11250--11299
17
2.9
17
96
0
91
82
6
0
12
0.85
11317--11399
5
16.6
5
87
9
125
0
36
43
20
1.52
11618--11662
19
2.4
19
92
0
72
22
22
31
24
1.99
11724--11796
31
2.4
31
86
4
103
28
24
24
21
1.99
12114--12147
11
2.9
12
86
8
52
79
0
0
20
0.73
12370--12401
13
2.4
14
94
5
57
84
0
0
15
0.63
12369--12404
7
5.1
7
87
12
56
83
0
0
16
0.65
12339--12401
27
2.3
28
78
10
67
76
3
4
15
1.09
12437--12501
20
3.2
20
91
0
94
20
30
32
16
1.95
12608--12638
1
31.0
1
100
0
62
0
0
0
100
0.00
12640--13132
42
12.0
39
88
6
599
37
21
17
23
1.94
12664--13132
124
3.8
122
89
6
673
38
20
17
23
1.93
14371--14409
8
4.9
8
87
0
60
10
12
0
76
1.01
18562--18603
12
2.9
15
86
13
54
85
4
0
9
0.72
18580--18605
1
26.0
1
100
0
52
100
0
0
0
0.00
18613--18680
5
13.6
5
85
11
95
0
35
44
20
1.52
18899--18939
19
2.2
19
90
0
64
19
24
29
26
1.98
19005--19077
31
2.4
30
81
6
92
28
23
24
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19396--19428
11
2.9
12
86
13
52
78
0
0
21
0.75
19715--19779
20
3.2
20
91
0
94
20
30
32
16
1.95
19817--21627
873
2.1
860
87
3
2553
25
24
25
25
2.00
21893--21939
22
2.1
22
100
0
94
23
31
19
25
1.98
21991--22043
26
2.0
26
92
0
88
26
22
22
28
1.99
23784--23836
26
2.0
26
96
0
97
26
24
22
26
2.00
21942--28887
896
7.8
895
86
3
9287
26
23
24
25
2.00
26474--26526
26
2.0
26
88
0
79
28
22
22
26
1.99

Tables:   1

The End!