Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168163.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_402, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28634

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
712--752
20
2.1
20
86
4
57
12
4
4
78
1.07
9164--9257
49
1.9
49
91
4
154
37
18
6
38
1.76
9917--9967
24
2.1
24
88
0
75
33
13
25
27
1.94
12161--12315
72
2.2
72
85
2
213
29
22
18
29
1.97
12367--13045
144
4.7
144
91
1
1018
35
12
18
33
1.89
17180--17222
18
2.4
18
84
7
52
27
4
2
65
1.25
17369--17471
27
3.8
27
76
2
100
23
4
1
69
1.17
17396--17479
23
3.6
23
72
17
66
21
5
1
71
1.14
17423--17492
27
2.5
28
80
17
76
22
7
1
68
1.22
17452--17493
17
2.4
17
84
4
57
23
7
0
69
1.13
17407--17525
44
2.8
43
76
11
111
23
6
1
68
1.23
18054--18090
15
2.5
16
83
16
53
51
0
48
0
1.00
18059--18100
20
2.0
22
86
9
61
47
0
52
0
1.00
18330--18362
3
11.0
3
100
0
66
33
0
0
66
0.92
18376--18433
5
10.8
5
82
10
62
18
5
0
75
0.98
18376--18433
17
3.6
15
78
15
62
18
5
0
75
0.98
18463--18621
59
2.7
59
91
2
248
44
6
11
36
1.68
24259--24812
42
13.1
41
80
9
444
23
15
21
39
1.91
24314--24860
293
1.8
300
80
8
672
23
15
20
39
1.91
25073--25102
6
5.2
6
92
8
53
16
0
0
83
0.65
25073--25102
11
2.6
11
94
5
51
16
0
0
83
0.65
25073--25202
23
5.6
22
70
15
66
22
3
0
73
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25073--25234
27
6.0
26
71
21
86
24
3
0
72
1.03
25112--25230
41
2.9
41
76
16
122
26
3
0
70
1.02
25147--25242
24
3.9
25
78
14
110
23
4
0
71
1.03
25075--25247
81
2.2
80
82
10
219
23
3
0
72
1.04
25128--25234
23
5.3
19
73
20
76
25
3
0
71
1.03
25754--25787
15
2.2
16
89
5
52
52
0
47
0
1.00
26047--26183
5
27.4
5
75
17
53
22
1
1
74
0.98
26051--26076
4
6.5
4
100
0
52
23
0
0
76
0.78
26108--26183
5
12.7
6
81
13
70
17
2
0
80
0.83
26900--26934
10
3.5
10
88
0
52
8
5
5
80
1.03
28182--28224
9
4.7
9
80
5
50
11
0
4
83
0.78

Tables:   1

The End!