Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168170.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28152

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
155--233
40
2.0
39
95
2
140
41
11
2
44
1.54
1672--1725
28
1.9
28
92
0
90
44
0
3
51
1.19
2041--2090
13
3.6
14
81
8
57
50
0
0
50
1.00
2156--2222
28
2.4
28
82
9
75
34
4
0
61
1.16
2173--2228
28
2.0
29
82
3
69
39
3
0
57
1.16
4421--4463
20
2.2
20
87
8
61
48
4
2
44
1.36
4451--4480
11
2.7
11
100
0
60
56
10
6
26
1.57
4603--4652
20
2.5
20
86
3
73
50
6
2
42
1.38
4599--4653
10
5.6
10
80
6
60
50
5
1
41
1.36
4669--4730
19
3.2
19
82
8
63
56
11
0
32
1.35
6109--6143
2
17.5
2
93
0
61
54
0
0
45
0.99
6207--6310
4
27.5
4
71
18
64
24
1
0
73
1.00
6211--6249
11
3.5
11
86
6
51
17
0
0
82
0.68
6211--6286
18
4.4
18
77
11
61
22
1
1
75
0.96
6208--6311
7
15.4
7
78
20
75
25
1
0
72
1.01
6332--6365
15
2.4
14
90
9
52
0
20
0
79
0.73
6371--6428
26
2.2
25
79
8
62
31
8
1
58
1.38
7406--7468
6
10.2
6
80
13
65
17
3
0
79
0.86
7409--7467
5
11.8
5
78
21
54
16
3
0
79
0.86
7409--7468
25
2.4
25
81
13
79
16
3
0
80
0.85
7407--7467
31
2.0
31
87
6
88
18
3
0
78
0.88
7475--7630
58
2.7
57
90
4
233
42
7
12
36
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7539--7628
27
3.2
27
67
22
67
42
5
14
37
1.69
7721--7778
10
5.8
10
78
8
55
56
5
3
34
1.38
7721--7787
19
3.3
20
81
8
73
58
4
2
34
1.34
7731--7795
11
6.1
11
81
12
57
56
4
1
36
1.29
7731--7787
11
5.5
11
83
10
75
57
5
1
35
1.31
8909--8933
2
12.5
2
100
0
50
0
48
0
52
1.00
11401--11493
20
4.6
20
82
1
96
32
6
9
51
1.60
11571--11850
41
6.9
41
85
4
316
29
4
10
55
1.53
11789--11857
22
3.1
22
80
14
79
27
1
13
57
1.44
15019--15053
14
2.5
14
95
0
61
48
8
22
20
1.76
16401--16557
52
3.0
52
87
5
194
24
25
8
40
1.84
17297--17327
11
2.8
11
90
0
53
90
0
9
0
0.46
22709--22775
34
2.0
34
87
0
98
38
2
8
49
1.50
26190--26214
10
2.5
10
100
0
50
36
0
0
64
0.94
26337--26362
12
2.2
12
100
0
52
46
0
0
53
1.00
26335--26364
12
2.6
11
90
10
51
40
0
0
60
0.97
26318--26378
28
2.3
28
86
8
83
42
1
0
55
1.09

Tables:   1

The End!