Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168172.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_410, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28051

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99--129
16
1.9
16
93
0
53
19
0
35
45
1.51
550--580
16
1.9
16
93
0
53
19
0
35
45
1.51
537--645
51
2.1
50
85
6
139
12
0
37
49
1.41
603--715
30
3.6
31
86
4
156
17
0
32
48
1.54
593--706
16
7.5
15
80
9
124
15
0
35
48
1.46
1771--1802
14
2.3
14
94
0
55
3
6
12
78
1.06
2129--2171
3
15.0
3
90
9
72
32
0
0
67
0.91
7397--7462
33
2.0
33
88
5
98
19
19
10
50
1.77
8286--8326
21
2.0
21
95
0
73
48
19
0
31
1.49
10071--10134
28
2.3
28
84
10
78
53
6
0
40
1.26
10812--10852
21
2.0
21
85
0
55
48
0
0
51
1.00
16576--16601
4
6.5
4
100
0
52
76
0
0
23
0.78
18623--18663
21
2.0
21
95
0
73
31
0
19
48
1.49
18698--18815
58
2.0
58
81
0
137
44
7
29
17
1.77
19487--19552
33
2.0
33
88
5
98
50
10
19
19
1.77
21573--21638
29
2.3
29
79
7
73
40
16
4
37
1.69
25019--25054
3
12.0
3
87
0
54
66
0
0
33
0.92
25377--25408
14
2.3
14
94
0
55
78
12
6
3
1.06
26463--26571
15
7.2
15
76
8
105
49
33
0
17
1.47
26475--26571
15
6.5
15
82
8
117
47
36
0
16
1.47
26445--26571
30
4.1
31
84
6
152
49
31
0
18
1.53
26561--26622
14
4.2
14
78
13
54
53
33
0
12
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26581--26611
16
1.9
16
93
0
53
45
35
0
19
1.51
26926--27023
15
6.4
15
80
11
110
47
35
1
15
1.52
26917--27023
30
3.5
31
85
6
146
47
33
1
16
1.58
26947--27082
14
9.5
14
75
18
120
47
36
0
15
1.51
27388--27484
16
6.1
16
83
6
117
49
32
1
16
1.53
27414--27485
31
2.3
30
88
6
108
50
36
1
12
1.49
27506--27545
15
2.7
15
84
3
55
52
30
0
17
1.45
26490--27831
460
2.9
462
95
2
2377
42
25
6
26
1.79

Tables:   1

The End!