Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168173.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27972

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1690--1737
18
3.0
15
80
14
51
18
4
2
75
1.07
1691--1737
16
2.9
16
78
12
51
17
4
2
76
1.04
5085--5111
10
2.7
10
100
0
54
40
0
0
59
0.98
12081--12108
11
2.5
11
100
0
56
14
0
7
78
0.95
12870--12937
30
2.3
30
84
0
82
33
17
1
47
1.57
14874--14911
16
2.2
18
86
9
53
26
0
2
71
1.00
15447--15519
31
2.4
31
88
4
103
23
26
23
27
2.00
15579--15618
19
2.0
20
90
4
64
27
25
20
27
1.99
15582--15625
19
2.3
19
84
0
61
25
29
22
22
1.99
15843--15880
5
7.6
5
87
0
58
23
42
34
0
1.55
15900--15940
12
3.0
14
83
13
50
9
0
4
85
0.73
15972--16575
151
3.9
153
92
3
973
29
14
17
38
1.90
21484--22051
42
14.0
42
85
11
699
22
17
24
35
1.95
22058--22131
15
4.7
16
81
8
98
90
9
0
0
0.45
22058--22131
28
2.7
27
90
10
116
90
9
0
0
0.45
22058--22131
1
74.0
1
80
0
85
90
9
0
0
0.45
22058--22131
8
9.6
8
87
10
102
90
9
0
0
0.45
22467--22503
3
12.7
3
94
5
67
29
0
0
70
0.88
22930--23001
31
2.3
32
83
7
94
22
26
25
26
2.00
23053--23096
19
2.4
19
88
3
63
22
31
22
22
1.98
23315--23357
5
8.6
5
89
0
68
23
41
34
0
1.55
23377--23419
15
2.9
15
86
3
52
9
0
4
86
0.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23377--23402
1
26.0
1
100
0
52
0
0
0
100
0.00
23444--23893
153
2.9
153
90
5
708
28
14
17
38
1.90

Tables:   1

The End!