Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167860.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_13, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 22724830
ACGTcount: A:0.34, C:0.15, G:0.15, T:0.34
Warning! 82000 characters in sequence are not A, C, G, or T
File 34 of 109
Found at i:5261565 original size:106 final size:104
Alignment explanation
Indices: 5261320--5261573 Score: 230
Period size: 106 Copynumber: 2.4 Consensus size: 104
5261310 TAATCTGGAT
* * ** * ** * *
5261320 TAAACCACGAGTCAAAAAAAGAAAACAAGTGGGATTAAA-CATTGAGTCAGAAAAAGAAAATGAC
1 TAAACCAAGAGTCAAAAAATGAAAATGA-CGGGATTAAACCA-CCAGTCAGAAAAAAAAAATGAA
* * *
5261384 CTAGATTAAAGCACGAGCCAGAAAATGAAAACGACTAAGAT
64 CTAGATTAAACCACGAGCAAGAAAATGAAAACGACTAAGAA
* *
5261425 TAAACCATGAGTCAAAAAATGGAAATGATCGGGATTAAACCACCAGTCAGAAAAACAAAAATGAA
1 TAAACCAAGAGTCAAAAAATGAAAATGA-CGGGATTAAACCACCAGTCAGAAAAA-AAAAATGAA
* *
5261490 C-AGGATTAAACCACGAGTCAAG-AAATGAAAATGACTGAGAA
64 CTA-GATTAAACCACGAG-CAAGAAAATGAAAACGACTAAGAA
* *
5261531 TAAACCACAG-GTCATAAAATGAAAAT-ACGAGGGATTAGACCAC
1 TAAACCA-AGAGTCAAAAAATGAAAATGAC--GGGATTAAACCAC
5261574 GTCTTAGATA
Statistics
Matches: 122, Mismatches: 20, Indels: 13
0.79 0.13 0.08
Matches are distributed among these distances:
104 1 0.01
105 45 0.37
106 72 0.59
107 4 0.03
ACGTcount: A:0.51, C:0.15, G:0.19, T:0.15
Consensus pattern (104 bp):
TAAACCAAGAGTCAAAAAATGAAAATGACGGGATTAAACCACCAGTCAGAAAAAAAAAATGAACT
AGATTAAACCACGAGCAAGAAAATGAAAACGACTAAGAA
Found at i:5263271 original size:106 final size:104
Alignment explanation
Indices: 5262990--5263474 Score: 342
Period size: 106 Copynumber: 4.6 Consensus size: 104
5262980 CGTAAGTCAA
* ** * * * *
5262990 AAAAATGAAAATGATCACA-ATTAAACCATGAGTCGAAAGATGAAAACTATGAGGATTAAACCAC
1 AAAAATGAAAATGACCA-AGATTAAACCACAAGTCAAAAAATGAAAACGATTAGGATTAAACCAC
* * * * **
5263054 GAGCCAAAAAATAAAAA-CATCCAGG-TTAAACCACAAGTC-
65 CAGTCAAAAAAGAAAAATGAT--AGGATTAAACCAGGAGTCG
* * * * * *
5263093 AGAAAATGAAAACGACCAGGATTAAACCATAAGTCAGAAAATGAAAACGATTGGGATTAAACTAC
1 A-AAAATGAAAATGACCAAGATTAAACCACAAGTCAAAAAATGAAAACGATTAGGATTAAACCA-
*
5263158 CCA-TCAAAAAAGAAAAATGATAGGGACTAAACCAGGAGTCG
64 CCAGTCAAAAAAGAAAAATGATA-GGATTAAACCAGGAGTCG
* * * * * *
5263199 AAAAATGAAAAAAGACCAAGATTAGACCACGAGTCAAAAAATGAAAATGATTATGATTAAACCAT
1 AAAAATG-AAAATGACCAAGATTAAACCACAAGTCAAAAAATGAAAACGATTAGGATTAAACCAC
* * ** * * *
5263264 GAGTCAAAAAATG-AAAATAATCCTGATTAAGCCATGAGCCG
65 CAGTCAAAAAA-GAAAAATGAT-AGGATTAAACCAGGAGTCG
* * **
5263305 AAAAATGAAAATGAGCC-AGATTAAACCACAAGTCAAAAAATGGAAACAACCAGGATTAAACCAC
1 AAAAATGAAAATGA-CCAAGATTAAACCACAAGTCAAAAAATGAAAACGATTAGGATTAAACCAC
* *
5263369 CAGTCAAAAAAAGAAAAACGATCAGGATTAAACAATGG-GTC-
65 CAGTC-AAAAAAGAAAAATGAT-AGGATTAAACCA-GGAGTCG
* * * ** * * *
5263410 AGAAAATGAAAATGATCGAGATTAAACTATGAGTCAGAAAATGAAAATGA-TAGAGAATAAACCA
1 A-AAAATGAAAATGACCAAGATTAAACCACAAGTCAAAAAATGAAAACGATTAG-GATTAAACCA
5263474 C
64 C
5263475 GGGTCATAAA
Statistics
Matches: 298, Mismatches: 66, Indels: 33
0.75 0.17 0.08
Matches are distributed among these distances:
103 2 0.01
104 64 0.21
105 75 0.25
106 155 0.52
107 2 0.01
ACGTcount: A:0.52, C:0.15, G:0.17, T:0.16
Consensus pattern (104 bp):
AAAAATGAAAATGACCAAGATTAAACCACAAGTCAAAAAATGAAAACGATTAGGATTAAACCACC
AGTCAAAAAAGAAAAATGATAGGATTAAACCAGGAGTCG
Found at i:5263502 original size:141 final size:138
Alignment explanation
Indices: 5262855--5321848 Score: 3522
Period size: 141 Copynumber: 425.8 Consensus size: 138
5262845 ATGAAAAAGA
* * * *** * * * * *
5262855 AAAATGATTGGGATTAAACCATGAGTCAGGAAATGAATGCGATCGGGTTTAAATCACGAGTCAAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * ** *
5262920 AAATTAAAA-CGATCGTGATTAAAACATGAGTCAAAAAATGAAGAACGATC-GAGATTAAACCGT
66 AAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAA-AACGATCAG-GATTAAACCAT
* *
5262983 AAGTCAAAAAAATG
126 GAGTC-AGAAAATG
* *
5262997 AAAATGATC-ACAATTAAACCATGAGTC-GAAAGATGAAAACT-AT-GAGGATTAAACCACGAGC
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAA-ATGAAAA-TGATAGA-GATTAAACCACGAGT
* * * *
5263058 CAAAAAATAAAAACATCCAGG-TTAAACCACAAGTCAGAAAATGAAAACGACCAGGATTAAACCA
62 CAAAAAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5263122 TAAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * ** * * * * *
5263136 AAAACGATTGGGATTAAACTACCCA-TCA-AAAAAGAAAAATGATAGGGACTAAACCAGGAGTCG
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA
* * * * * *
5263199 AAAAATGAAAAAAGACCAA-GATTAGACCACGAGTCAAAAAATGAAAATGATTATGATTAAACCA
64 AAAAATG---AAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5263263 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* ** * * *** *
5263277 AAAATAATCCTGATTAAGCCATGAG-CCGAAAAATGAAAATGAGCCAGATTAAACCACAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAG-AAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * *
5263341 AAAATGGAAACAACCAGGATTAAACCACCAGTCAAAAAAAGAAAAACGATCAGGATTAAACAATG
65 AAAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
*
5263406 GGTCAGAAAATG
127 AGTCAGAAAATG
* * * *
5263418 AAAATGATCGAGATTAAACTATGAGTCAGAAAATGAAAATGATAGAGAATAAACCACGGGTCATA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * ** * *
5263483 AAATGAAAATGCAAGGGATTAGACCGC--GTCTTAGATAATGAAAACAACCAAAATTAAATCACG
66 AAATGAAAAT-CAA-GGATTAAACCACAAGTC--AAAAAATGAAAACGATCAGGATTAAACCATG
5263546 AGTCAGAAAATG
127 AGTCAGAAAATG
** * * * * * * * * * * * *
5263558 -AAACCAACAAGGCTTAAATCACGAATCAAAAAAATGAAAATGACCAG-GTTTAAATCATGAGTT
1 AAAATGATCGA-GATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
*** * * ** ** * * ** * *
5263621 AGGGAA-CAAAAGCGGTGGGAATTAAACCGTAAGTCAAAAAATGAAAATGACCAAAATTAAATCG
63 AAAAAATGAAAATC--AAGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5263685 TGAGTCAGAAAA-C
125 TGAGTCAGAAAATG
** * * ** * ***
5263698 AAAACAACCGAGATTAAATCACAAGTCAAAAAATGAAAATGATCAG-GATTAAACTGTGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCAA
* * * * * * *
5263762 AAAATGAAAA-CGATCGAGATTAAATCACAAGTCAAAAATTGAAAAAC-AACCGTCATTAAATCA
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAACCA
5263825 TGAGTCAGAGAAATG
125 TGAGTCAGA-AAATG
* * * * * *
5263840 AAAATGATCGATATTAAATGACAT--GTCA-AAAATTGAAAACTGCT-GAGAATAAATCATGAGT
1 AAAATGATCGAGATTAAA--CCATGAGTCAGAAAA-TGAAAA-TGATAGAGATTAAACCACGAGT
* * * * * * * * * * * ** **
5263901 CAAAAAATCAAAACCACCGAAACTAAATCACATGTCAAAGAACGAAAAGTGACCAAAATTAAGTC
62 CAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAA-CGATCAGGATTAAACC
* * *
5263966 ACGAGTTAAAAAATG
124 ATGAGTCAGAAAATG
* ** * ** * * * *
5263981 AAAATGA-CCAGGATTAAACTGTGAGTCAAAAAATGAAAATGACCCG-TACTAAACTACGAGTTA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
** * * * * *
5264044 GAAAATAAAAAAGATCGA-GATTAAACCACAAGTCAGAAAATGAAAATGATCAGGATTAAATCAC
64 -AAAA-ATGAAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5264108 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* ** * * * ** * ** * **
5264121 AATACAATCGGGTTTAAATCGCGAGTTA-AGAAATGAAAACAATCAG-GATTAAATCATTAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGAT-AGAGATTAAACCACGAGTCA
* * * * ** * * *
5264184 AGAAATGACAA-CGACTGAGATTAAATCATGAGTCAGAAATAA--AAAATGACCAGGATTAAATC
64 AAAAATGAAAATC-A-AG-GATTAAACCACAAGTCA-AAA-AATGAAAACGATCAGGATTAAACC
*
5264246 ACT-AGTCAAAAAATG
124 A-TGAGTCAGAAAATG
** * * * * ** * * *
5264261 AAAACAAT-AAGGATGAAACCATGAGCCAAAAAATGAAAATGACCGAGATTAAATCACTAGCCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA-
* * ** * *
5264325 AAAAA-GAAAAATGACCGAGATTAAA-CATTGAGTCAGAAAATGAAAACGATTAGGATTAAACCA
64 AAAAATG-AAAATCA-AG-GATTAAACCA-CAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5264388 CGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * *
5264402 AAAATGATCGAGATTAAACCTTGAGTCAAAAAATGAAAATGACCA-AGATTAAACCACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * *** * ** * * *
5264466 AAAATGAATACAATCAA-GTTTAAATCGTGAGTGAAGGAATGAAAACAATCAAGATTAAATCATG
65 AAAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5264530 AGTCA-AGAAATG
127 AGTCAGA-AAATG
* * * * * * * *
5264542 ACAACGATTGAGATTAAATCACGAGTCA-TAAATAAAAAATGACCAG-GATTAAACCAC-ACGTC
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAAT-GAAAATGA-TAGAGATTAAACCACGA-GTC
* * * * * * *
5264604 AGAAAATGAAAATGATAAGGATTAAATCACGAGTCAGAAAATGAAAATGA-CCGAGATTAAACCA
63 AAAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
**
5264668 CT-AG-CTAGAAAAAA
125 -TGAGTC-AGAAAATG
* * * *
5264682 AAAATGATCGAGATTAAA-CATTGAGTCAGAAAATGAAAACGATTGGGATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** * * * *
5264746 AAAATG-AAA--AA-GATCGAA--A-AAG--GAAAAA--AAAA-GATCGGGACTAAACCACGAGT
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
*
5264799 TAGAAAATG
130 CAGAAAATG
*** * * * ** * ** *
5264808 ATTGTGA-CCAGTTTGAATTATGAGTCA-AGAAATGAAAATGACT-GGGATTAAAGTACGAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * * *
5264870 AAAGATGAAAAACAACCTGGATTAAACCATAAGTCAGAAAACGAAAACAAGT-GGGATTAAA-CA
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
*
5264933 TTGAGTCAGAAAAAG
125 -TGAGTCAGAAAATG
* * * * * * * * * *
5264948 AAAATGACCTAGATTAAAGCACGAGCCAGAAAATGGAAACGACTA-AGATTAAACCATGAGTTAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * *
5265012 AAAATGGAAAT-AACCGAGATTAAACCACCAGTCAGAAAAA-GAAAAATGAAT-AGGATTAAACC
65 AAAATGAAAATCAA--G-GATTAAACCACAAGTCA-AAAAATG-AAAACG-ATCAGGATTAAACC
* *
5265074 ATGAGTCATG-AAGTA
124 ATGAGTCA-GAAAATG
* * * * * * *
5265089 AAAATGACTGGA-ATTAAGCTATGAGTTAGAAAATGAGAACGATA-A-A--AAA--A--A-T-GA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** ** * * *
5265143 AAAA-GAAAAATGATTGGGATTAAACGATGAGTCAAAAAATGAATGCGATCGGGTTTAAATCATG
65 AAAATG-AAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5265207 AGTCA-AGAAATG
127 AGTCAGA-AAATG
* * ** * * * ****
5265219 AAAATGATCGTGATTAAAACACAAGTCAAAAAATGAAGAACGACCA-AGATTAAACGGTAAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGA-TAGAGATTAAACCACGAGTC-
* * * ** * ** *
5265283 AAAAAATGAAAATGACCGCGATTAAACCATAAGTCGGAAGATGAAAACGATGGGGATTAAACCGT
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5265348 GAGTCAAAAAATG
126 GAGTCAGAAAATG
** * * * ** * * *
5265361 AAAACAACCCAGGTTAAACCACAAGTTAGAAAATGAAAACGATCAG-GATTAAACCACAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCAA
* * * * * *
5265425 AAAATGAAAATGATTGGGATTAAACTACCCA-TCAAAAAAAGAAAAATGAT-AGGAATTAAACCA
65 AAAATGAAAATCA--AGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCAGG-ATTAAACCA
*
5265488 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * * * * *
5265502 AGAAAAGA-CCATGATTAGACCACGAGTCAAAAAATGAAAATGACTA-TGATTAAACCATGAGTC
1 A-AAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
** * ** * *
5265565 AAAAAATGAAGATAATC-CTGATTAAGCCATGAGTCAAAAAATGAAAATGAGCCA-GATTAAACC
63 AAAAAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACC
** *
5265628 ACAAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * * * * * * * * *
5265643 GAAA-CAACCAGGATTAAACCATCAGTCAAAAAAAGAAAAACGATCAG-GATTAAACCATGGGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATG-AAAATGAT-AGAGATTAAACCACGAGTC
* * * * ** * * * * *
5265706 AGAAAATGAAAATTATCGAGATTAAACTATGAGTCAGAAATTGAAAATGA-CTAAGAATAAACCA
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
* *
5265770 -CAGGTCATAAAATG
125 TGA-GTCAGAAAATG
* * * * * * ** * * ** *
5265784 AAAATGCA-AGGGATTAGA--TTGCGTCTTAGATAATGAAAACAACCA-AAATTAATTCATGAGT
1 AAAATG-ATCGAGATTAAACCATGAGTC--AGAAAATGAAAATGA-TAGAGATTAAACCACGAGT
* * ** * *
5265845 CAGAAAATGAAAACAACAAGGATTAAATGACGAA-TCAAAAAAATGAAAATGA-CTAAGATTAAA
62 CAAAAAATG-AAA-ATCAAGGATTAAACCAC-AAGTC-AAAAAATGAAAACGATC-AGGATTAAA
* ** *
5265908 TCATGAGTCAGGGAA-C
122 CCATGAGTCAGAAAATG
* * * * * * **
5265924 AAAAGCGAT-GGGAATTAAACCGT-AGGTCAAAAAATGAAAATGACTA-AAATTAAATCGTGAGT
1 AAAA-TGATCGAG-ATTAAACCATGA-GTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGT
* * * * * *
5265986 CAGAAAA-CAAAAACAACCGAGATTAAACCACGAGTCAAAAAATGAAAATGATCAGGATTAAATC
62 CAAAAAATGAAAATCAA--G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
* *
5266050 ATGAGGCAAAAAATG
124 ATGAGTCAGAAAATG
* ** * ** * ** * *
5266065 AAAATGATCGAGATTAAATCAAAAGTCAAAAAATGAAAAACAATCGTCATTAAATCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA-
* * * * * * * * * * * *
5266130 AGAAATGAAAATGATTGATATTAAATCACATGTCAGAAATTGAAAACTA-CTGAGAATAAATCAT
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5266194 GAGTCAGAAAATC
126 GAGTCAGAAAATG
** * * * * * * * * * * *
5266207 AAAACCACCGAAACTAAACCA-CATGTCAGAGAACGAAAAATAATCGAAATTAAATCACGAGTTA
1 AAAATGATCGAGATTAAACCATGA-GTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA
* * * *
5266271 AAAAATGAAAATGACCGAGATTAAACCACTAG-CTAGAAAAAGGAAAACGATC-GAGATTAAA-C
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTC-A-AAAAATGAAAACGATCAG-GATTAAACC
* *
5266333 ATTGAATTAGAAAATG
124 A-TGAGTCAGAAAATG
* * * ** * ** * **
5266349 AAAACGATTGGGATTAAACCACAAGTCAGAAAATGAAAA-CA-ATTGA--AAA--ATGA-AAAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * ** * * * *
5266407 AAATG---ATC-GGGACTGAACCACGAGTTAGAAAATGAATGCGA-CTA-GTTTGAATCATAAGT
66 AAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCATGAGT
*
5266466 CA-AGAAATA
130 CAGA-AAATG
* ** * * * * ** *
5266475 AAAATGA-CTGGGATTAAAGTACGAGTTAAAAAATAAAAAACA-ACCTG-GATTAAACCACGAGA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATA---GAGATTAAACCACGAGT
* * **** * *
5266537 CAGAAAACGAAAA-CAAGTGGGATTAAACGTTGAGTCAGAAAAA--AAAATGACCTA-GATTAAA
62 CAAAAAATGAAAATCAA---GGATTAAACCACAAGTCA-AAAAATGAAAACGATC-AGGATTAAA
* *
5266598 GCACGAG-CTAGAAAATG
122 CCATGAGTC-AGAAAATG
* * * * * * * *
5266615 GAAACGA-CTAAGATTAAACCATGAGTCAAAAAATGGAAATGATCGGGATTAAACCACCAGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA-
** ** * * * *
5266679 AAAAA-GAAAAATGAACAA-GATTAAACCATGAGTCAGGAAATGAAAATGA-CTGGAATTAAGCT
64 AAAAATG-AAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAACC
* *
5266741 ACGAGTTAGAAAATG
124 ATGAGTCAGAAAATG
* * * * * * * *
5266756 AGAACGAT--A-A--AAA--A--A-T--GAAAAAGAAAAATGATTGGGATTAAACCATGTGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5266809 AAAATGAATGCGATC-GGGTTTAAATCACGATTTAAGAAATGAAAACGATC-GTGATTAAATCAT
65 AAAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
5266872 GAGTCA-AGAAATG
126 GAGTCAGA-AAATG
* * * * * * *
5266885 ACAACGA-CTAAGATTAAACCATGAATCAAAAAAT-AGAAATGACT-G-GATTAAACAACCAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGA-AAATGA-TAGAGATTAAACCACGAGTC
* *** * * *
5266946 AAAAAAAGAAACA-CAATCGGGATTAAACCATGGGTCAGAAAATGAAAATGATC-GAAATTAAAC
63 AAAAAATGAAA-ATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAAC
* * *
5267009 TATGAGGCAAAAAATG
123 CATGAGTCAGAAAATG
* * * * * * * *
5267025 AAAATGATTGAGAATAAACCACGGGTCATAAAATGAAAATG-T-GAAGGATTAGATCGC-A-TCT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAG-A-GATTAAACCACGAGTC-
* * ** * * * * *
5267086 TAGATAATGAAAA-CAACCAAAATTAAATCACGAGTCAGAAAATGAAAAC-AACAAGGATTAAAT
63 -AAAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAAC
* *
5267149 CACGAATCAGAAAGATG
123 CATGAGTCAGAAA-ATG
* * * * * * *
5267166 AAAATCACCAAGATTAAATCATGAGTCAAAAAATGAAAATGACCAG-GATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5267230 AACATGAATACAATC-AGGTTTAAATCACGAGTTAAGAAATGAAAACAATCGGGATTAAATCATG
65 AAAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5267294 AGTCA-AGAAATG
127 AGTCAGA-AAATG
* * ** * * * * *
5267306 ACAACGA-CTGAGATTAAATGACGAGTCAG-AAATAAAAAATGACCAG-GATTAAATCACTAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGA-TAGAGATTAAACCACGAGTC
* * ** *
5267368 AAAAAAT-AAAAACAATAAGGATTAAACCACGAGTCAAAAAATGAAAATAACTGAGG-TTAAACC
63 AAAAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACC
*
5267431 ACT-AG-CTAGAAAAAGG
124 A-TGAGTC-AG-AAAATG
* * *
5267447 AAAATGATCGAGATTAAA-CATTGAAG-CAGAAAACGAAAATGATTGGGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TG-AGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
** * * * * * *
5267510 AAAAATG--AA--AAGGATCGAA--A-AA-T--GAAAA--AAAATGATCAAGACTGAACCACGAG
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
*
5267563 TTAGAAAATG
129 TCAGAAAATG
*** * * * * * * ** *
5267573 -ATGCGA-CCAGTTTGAATCACGAGTCA-AGAAATGAAAATGACT-GGGATTAAAGTACGAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * ** * * *
5267634 AAAGATGAAAAACAACCTGGATTAAACCATGAGTCAGAAAATGAAAACAAGT-GGGATTAAA-CA
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
*
5267697 TTGAGTCAGAAAAAG
125 -TGAGTCAGAAAATG
* * * * * ** * * * *
5267712 AAAATGACCTAGATTAAAGCACGAGCCAGAAAATGGAAACGGCTA-AGA-TAAAGCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAAT-GAAAATGATAGAGATTAAACCACGAGTCAA
* * * *
5267775 AAAATGGAAATGATC-GGGATTAAACCACCAGTCAGAAAAA--AAAATGAACAGGATTAAACCAT
65 AAAAT-GAAA--ATCAAGGATTAAACCACAAGTCA-AAAAATGAAAACGATCAGGATTAAACCAT
*
5267837 G-GTCAGGAAATG
126 GAGTCAGAAAATG
* * * * * * *
5267849 AAAATGACTGGA-ATTAAGCTACGAGTTAGAAAATGAAAATGATA-A-A--AAA--ATGA--AAA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** * ** * ** * *
5267905 AAAATG---ATTGA-GAGTAAACCATGAGTCAGAAAATGAATGCGATC-GAGATTAAATCACGAG
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATGAG
*
5267965 TCA-AGAAATA
129 TCAGA-AAATG
* * * * * * * *
5267975 AAAATGATCGTGATTAAAACACGAGTCAAAAAATGAAGAACGACCA-AGATTAAATCACAAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGA-TAGAGATTAAACCACGAGTC-
** * * *** * * * * *
5268039 AAAAAACAAAAATGATCACGATTAAACCGTGAGTCGAAAGATGAAAATGA-CGGGGATTAAACCT
63 AAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
* *
5268103 TAAGTCAAAAAATG
125 TGAGTCAGAAAATG
** * * * ** * * *
5268117 AAAACAACCTAGGTTAAACCACAAGTCAGAAAATGAAAACGACTAG-GATTAAACCACAAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * *
5268181 AAAATGAAAA-CGATTGGGATTAAACTACCCA-TCAAAAAAAGAAAAATGATAAGAATTAAACCA
65 AAAATGAAAATC-A--AGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCAGGATTAAACCA
*
5268244 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * * ** * * *
5268258 AAAAAGGA-CCATGATTAGATCGCGAGTCAAAAAATGAAAATGACTA-TGATTAAACCATGAGTC
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * ** * *
5268321 AAAAAATGAAAAT-AATCCTGATTAAGCCATGAGTCAAAAAATGAAAATGAGCCA-GATTAAACC
63 AAAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACC
** *
5268384 ACAAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * * * * ** * *
5268399 GAAA-CAACCAGGATTAAATCACCAGT-A-AAAA--AAAATGATCAG-GATTAAACCATGGGTCA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCA
* * * ** ** * * * * * *
5268458 AAAAATAAAAATGATCGAGATTAAATTATGAGTCAGAAAATGAAAATG-GCTGAGAATAAACCAC
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
* *
5268522 GAGTTATAAAATG
126 GAGTCAGAAAATG
** * * ** * * * *
5268535 AAAATG--CGAGGGATTGGACC--GCGTCTTAGATAATGAAAACAACCA-AAATAAAATCACGAG
1 AAAATGATCGA--GATTAAACCATGAGTC--AGAAAATGAAAATGA-TAGAGATTAAACCACGAG
* * * * *
5268595 TCAGAAAATGAAAACAACAAGAATTAAATCACGAA-TCAAAAAAATGAAAATGATCAGGATTAAA
61 TCAAAAAATG-AAA-ATCAAGGATTAAACCAC-AAGTC-AAAAAATGAAAACGATCAGGATTAAA
* * ** **
5268659 TCATGAGTTAGGGAACA
122 CCATGAGTCAGAAAATG
* * * * * * * * **
5268676 AAAACGAT-GGGAATTAAACCGTAAGTCAAAAAATGAAAATGACCA-AAATTAAATCGTGAGTCA
1 AAAATGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * * *
5268739 GAAAA-CAAAAACAACCGAGATTAAACCACGAGTGAAAAAATGAAAATGATCAGGATTAAACCGT
64 AAAAATGAAAATCAA--G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* *
5268803 GAGTCAAAAAATA
126 GAGTCAGAAAATG
* * * ** ** ** * *
5268816 AAAACGATCGAGATTACATCACAAGTCAGAAAATGAAAAACA-ACCGTCATTAAATCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTCA
* * * * * * * * * *
5268880 GAGAAAT-AACAATGATCGATATTAAATCACATGTC-AAAAATCGAAAACTA-CTGAGAATAAAT
64 -AAAAATGAA-AATCA-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAG-GATTAAAC
* * *
5268942 CTTGAGTTAGAAAATT
123 CATGAGTCAGAAAATG
** * * * * *
5268958 AAAACCATCGAAACTAAATCACAT--GTCAGAGAATGAAAAATGACT-GAAATTAAATCACGAGT
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATG-AAAATGA-TAGAGATTAAACCACGAGT
* * **** * * * * *
5269020 TAAAAAATAAAAAT-AATCGGGATTAAACTGTGAGTTAAAAAAATGAAAATGACCTGTATTAAAC
62 CAAAAAATGAAAATCAA---GGATTAAACCACAAG-TCAAAAAATGAAAACGATCAGGATTAAAC
* * * *
5269084 TACGAGTTAGAAAATA
123 CATGAGTCAGAAAATG
* * * * * *
5269100 AAAAAGATCGAGATTAAA-CATTGAGTCAAAAAATAAAAACGATCGAGATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * ** * * * * * *
5269164 AAAATGAATA-CAATCGAGTTTAATTCGCGAGTTAAGAAATGAAAACAATCAGGATTAAATCATG
65 AAAATGAAAATCAA--G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5269228 AGTCA-AGAAATG
127 AGTCAGA-AAATG
* * * * * * *
5269240 ACAACGA-CTGAGATTGAATCATGAGTCAG-AAATAAAAAATGACTAG-GATTAAATCACTAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGA-TAGAGATTAAACCACGAGTC
** * * *
5269302 AAAAAATGGAAATGAT-AAGGATTAAACCATGAGTCAGAAAATGAAAATGA-CCGAGATTAAACC
63 AAAAAAT-GAAA--ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
*
5269365 ACT-AG-CTAGAAAAAGG
124 A-TGAGTC-AG-AAAATG
* * * * *** * * * * *
5269381 AAAACGACCGAGATTAAA-CATTGAGTTAGAAAACGAAAGCAATTGGGATTAAACCACAAGTTAG
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* ** * * * * * *
5269445 AAAATGAAAA-C---TATCGAA--A-AA-T--GAAAA--AAAATGATCGGGACTGAACCACGAGT
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
*
5269498 TAGAAAATG
130 CAGAAAATG
*** * * * * * ** *
5269507 AATGCGA-CTAGTTTGAATCATGAGTCA-AGAAATGAAAATGACT-GGGATTAAAGTACGAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * * *
5269569 AAAAATAAAAAACAAACTGGATTAAACCACGAGTCAGAAAACGAAAACAAGT-GGGATTAAA-CA
64 AAAAATGAAAATC-AA--GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
*
5269632 TTGAGTCAGAAAAAG
125 -TGAGTCAGAAAATG
* * * * * *
5269647 AAAATGACCTAGATTAAAGCACGAG-CTAGAAAATGGAAATGACTA-AGATTAAACCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * ** * *
5269710 AAAAATGAAAATGATCGGGATTAAACCACCTGTCAGAAAAA--AAAATGAGCAGGATTAAACCAT
64 AAAAATGAAAATCA--AGGATTAAACCACAAGTCA-AAAAATGAAAACGATCAGGATTAAACCAT
*
5269773 GAGTCAGGAAATG
126 GAGTCAGAAAATG
* * * * * * * **
5269786 AAAATGACTGGA-ATTAAACTACGAGTTAGAAAATGAGAACGATA-A-A--AAA--ATGA-AAAA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** ** * * ** * * * *
5269843 AAAATG---A-CTGGGATTAAACCATGAGTCAGAAAGTGAATGCGATCGGGTTTAAATCACGAGT
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
5269904 CA-AGAAATG
130 CAGA-AAATG
* * * * * * ** **
5269913 AAAATGATCGTGATTAAAACACGAGTAAAAAAATGAAGAACGACCGAGATTAAACCATAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC--
* * *** ** * *
5269978 AAAAAATGAAAATGATCACGATTAAACCGTGAGTCGGAAGATGAAAATGA-CAGGGATTAAACCA
63 AAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCA-GGATTAAACCA
* *
5270042 TTAGTCAAAAAATG
125 TGAGTCAGAAAATG
** * * ** * * * * *
5270056 AAAACAACCCAGATTAAACCACAAGTTAGAAAATAAAAACGATCAG-GTTTAAATCACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCAA
* * * * * *
5270120 GAAATGAAAA-CGATCGTGATTAAAACACGACTCAAAAAATGAAAAACGA-CCGAGATTAAATCG
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAA-C-
* *
5270183 CA--AGTCAAAAAAAAAG
123 CATGAGTC--AGAAAATG
* * *** * ** * * * * **
5270199 AAAATGACCGCGATTAAATTGTAAGTTGGAAGATGAAAACGACAGGGATTAAACCGTGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * * * **
5270264 AAATGAAAA-CAACCCAGATTAAATCACAAGTCAGAAAGTGAAAAAGACCAGAATCAAACCACAA
66 AAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5270328 GTTAGAAAATG
128 GTCAGAAAATG
* * * ** * * *
5270339 AAAATGATTGGGATTAAACTACCA-TCAAAAAAAGAAAAATGATAGGGATT-AACCACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * *
5270402 AAAATGAAAAAGGACCACGATTAGACCACAAGTCAAAAAATGAAAATGA-CTATGATTAATCCAT
65 AAAATG-AAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5270466 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* ** * * *** * *
5270479 AAAATAATCTTGATTAAGCCATGAGTCAAAAAATGAAAATGAGCCAGATTAAACCACAAGCCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * * *
5270544 AAATGGAAACAACCAGGGTTAAACTACCAGTCAAAAAAAGAAAAACAATCAGGATTAAACCATGG
66 AAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATGA
*
5270609 GACAGAAAATG
128 GTCAGAAAATG
* * * * *
5270620 AAAGTGATCGAGATTAAACTATGAGTCA-AAAAGTTAAAATGACT-GAGAATAAACCACAAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAA-TGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * ** * * * * * * *
5270683 TAAAATGAAAATGCGAGGGATT-GACCGCATCTTAGATAATGAAAAC-AACGAAGATTAAATCAC
64 AAAAATGAAAAT-C-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5270746 GAATCA-AAAATG
126 GAGTCAGAAAATG
* * * * * * * * * *
5270758 AAAA-CAACAAGGATTAAATCATGAATCAAAAAAATAAAAATGACCAG-GATTAAATCATGAGTC
1 AAAATGATCGA-GATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
*** * * * ** ** * * * * **
5270821 AGGGAA-CAAAAGCGATGGAATTAAACCGTAAGTCAAAAAATGAATGCAATCGGGTTTAAATCGC
63 AAAAAATGAAAATC-AAGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5270885 GAGTTA-AGAAATG
126 GAGTCAGA-AAATG
** * * * *
5270898 AAAACAATCGAGATTAAATCATGAGTCA-AGAAATGACAACGACTA-AAATT-AACTCACGAGT-
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAAC-CACGAGTC
* * * * * *
5270959 AAGAAATAAAAAATGACCAGGATTAAATCACTAGTCAAAAAATGAAAACGATAAGGATTAAACCA
63 AAAAAAT-GAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
* *
5271024 CGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * *
5271038 AAAATGACCGAGATTAAACCACT-AG-CTAGAGAAAGGAAAATGATCGAGATTAAA-CATTGAGT
1 AAAATGATCGAGATTAAACCA-TGAGTC-AGA-AAATGAAAATGATAGAGATTAAACCA-CGAGT
* * * * * * * *
5271100 CAGAAAATGAAAATGATTGGGATTAAACCCCGAGTCAGAAAATGAAAATGAT--TGA--AAA--A
62 CAAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
5271159 T--G--A-AAAA--
125 TGAGTCAGAAAATG
* * * * * *
5271166 AAAATAATCGGGATTAGACC---A-CCAG----TCAAAA--A-A-AGATTAAACCA-TAGGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGA-GTCAA
* * * * *
5271218 AAAATGGAAACAACCAGGATTAAACCACTAGTCAAAAAAAGAAAAACGATCAGGATTAAACCAGG
65 AAAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
*
5271283 GGTCAGAAAATG
127 AGTCAGAAAATG
* * * * * *
5271295 AAAATGATCGAGATTAAACTATGAGTTAGAAAATGAAAATGACT-GAGAATAAATCATGAGTCAT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * ** * * * * * * * * *
5271359 AAAATGAAAATGCGAGGGATTAGATCGCATCTTAGATAATGAAAACAACCAAGATTGAATCACGA
65 AAAATGAAAAT-C-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5271424 GTCAGAAAATG
128 GTCAGAAAATG
* * * * * * * * * *
5271435 AAAA-CAACAAAGATTAAATCACGAATCAAAAAAATGAAAATGACCA-AGATTAAATCATGAGTC
1 AAAATGATC-GAGATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
*** * * * **** * *
5271498 AGGGAA-CAAAAGCGATGGAAATTAAATTGTAAGTCAAAAAAATGAAAATGA-CCGTGATTAAAC
63 AAAAAATGAAAATC-AAGG--ATTAAACCACAAGTC-AAAAAATGAAAACGATCAG-GATTAAAC
* *
5271561 CGTGAATCAGAAAATG
123 CATGAGTCAGAAAATG
* * * * * * * *
5271577 AAAATGA-CGGGGATTAAACCGTGAGTCAAAAAATGAAAA-CA-ACGTAAATTAAAACGCAAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATA-G-AGATTAAACCACGAGTC
* * * *
5271639 AGAAAATGAAAATGACCAGGATTAAACCACAAGTCAGAAAATG-AAACGAT--TGA--AAA--AT
63 AAAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
5271697 GA---A-AAAA--
126 GAGTCAGAAAATG
* * * * * ** * * * * *
5271704 AAAATGATAGGGACTAAACCACGAGTTAGAAAATG--AATGCGACCAGTTTGAATCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA-GAGATTAAACCACGAGTCAA
* ** *** * * * * * * *
5271767 GAAATGAAAATGACTGGGATTAAGGTACGAGTTAAAAAATGAAAAACAACCTGGTTTAAACCACG
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
* *
5271832 AGTCAAAAAATA
127 AGTCAGAAAATG
** * * * * *** *
5271844 AAAACAAGT-GGGATTAAA-CATTGAGTGAAAAAAAGAAAATGACCTAGATTAAAGCC-CGAGCC
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAA-CCACGAGTC
* ** ** * * *
5271906 AGAAAATGGAAACGGCTAA-GATTAAACCATGAGTCAAAAAATAAAAATGATCGGGATTAAACCA
63 AAAAAAT-GAAA-ATC-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
** * *
5271970 CCATTCAGAAAAAG
125 TGAGTCAGAAAATG
* * * ** * * * * * *
5271984 AGAACGAT--A-A--AAA-AATGAAACAG---A--AAAATGATTGGGATTAAACCATGTGTTAGA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * *
5272038 AAATGAATGCGATC-GGGTTTAAATCACGAGTCAAAAAATGAAAACGATC-GTGATTAAACCACG
66 AAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
* **
5272101 A-TTAGACCATG
127 AGTCAGAAAATG
* ** ** ** *
5272112 ---A-GGT--A-A--AAA--ATGA-AAATGACTATGAAAACAACCA-AGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCA-GAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* ** * * * *
5272164 GAAAATGAAAA-C---GATCGAA--A-AA-T-GAAAAA--AAAATGAT-AGGGACTAAACCACGA
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCA-GGATTAAACCATGA
*
5272217 GTTAGAAAATG
128 GTCAGAAAATG
* * * * *** *
5272228 --AA--A-CCAGTTTGAATCATGAGTCA-AGAAATGAAAATGACTAG-GATTAAGGTACGAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * *
5272286 AAAAATGAAAAACAACCTGGTTTAAACCACGAGTCAAAAAAATGAAAACAAGT-GGGATTAAA-C
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTC-AAAAAATGAAAACGA-TCAGGATTAAACC
**
5272349 ATTGAGTCA-AAAAAA
124 A-TGAGTCAGAAAATG
* * * * * * * * *
5272364 AAAATGACCTAGATTAAAGCACGAGCCAGAAAATGGAAACGACTA-AGATTAAACCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * *
5272428 AAAATGGAAATGATTAGGATTAAACCACCAGTCAGAAAAA-GAAAAATGAACAGGATTAAATCGT
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCA-AAAAATG-AAAACGATCAGGATTAAACCAT
*
5272492 GAGTCAGGAAATG
126 GAGTCAGAAAATG
* * * * * * * *
5272505 AAAATGACTGGA-ATTAAGCTACGAGTTAGAAAATGAGAACGATA-A-A--AAA--ATGA---AA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * *** * * * *
5272560 AAGA--AAAATGATTGGGATTAAACCATGAGTCAGAAAATGAATGTGATCGGGTTTAAATCACGA
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5272623 GTCA-AGAAATG
128 GTCAGA-AAATG
* * * * * * * * *
5272634 AAAACGATCGTGATTAAAACATGAGTCAAAAAATGAAGAACGATCGAGATTAAATCGCAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC-A
* * * * *** * ** * * ** *
5272699 AAAAATGAAAATGATCGCAATAAAACCGTGAGGCGGAAGATGAAAATGATGGGGATTAAACCGTG
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
*
5272764 AGTCAAAAAATG
127 AGTCAGAAAATG
** * * ** * * * ** *
5272776 AAAACAACCCAGATTAAACCACAAGTCAAAAAATGAAAACGATTAG-GTTTAAACCATAAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * *
5272840 AAAATGAAAA-CTATTGGGATTAAACTACATA-TCAAAAAAAGAAAAATGAT-AGGGATTAAACC
65 AAAATGAAAATC-A--AGGATTAAACCACA-AGTCAAAAAATG-AAAACGATCA-GGATTAAACC
* *
5272902 ACGAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * * * * * * *
5272917 AAAAAGGA-CCATAATT-AACCACGAGTCAAAAAATGAAAATGACTA-TGATTAAACCATGAGTT
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * ** * *
5272979 AAAAAATGAAAAT-AATCTTGATTAAGCCATGAGTCAGAAAATGAAAACGAGCCA-GATTAAACC
63 AAAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACC
*** *
5273042 GCAAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * * * ** * ** * * * *
5273057 GAAA-CAACCAGGATTAAACCACCAGTCAAAAAAAAAAAAAGATCAG-GATTAATCCATGGGTCA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCA
* * * * ** * * * * *
5273120 GAAAATGAAAATGATCGAAATTAAA-C-TGAGTCAGAAAATGAAAATGA-CGGAGAATAAACCAC
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5273182 GAGTCATAAAATG
126 GAGTCAGAAAATG
* ** * * * * *
5273195 AAAATGAAAACAGCCCAGATTAAACCACAAGTCAGAAAATGAAAACGATTGGGATTAAACTAACC
1 AAAATG--ATC-G---AGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAAC-CACG
* * * * *
5273260 A-TCAAAAAAAGAAAAATGATAGGGATTAAACCACGAGTCAAAAAATGAAAATGA-CTATGATTA
59 AGTCAAAAAATG-AAAATCA-A-GGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTA
* *
5273323 AACCATAAGTCAAAAAATG
120 AACCATGAGTCAGAAAATG
* ** * * *** * ***
5273342 AAAATAATCCTGATTAAGCCATGAGTCAGAAAATGAAAACGAGCTAGATTAAATCGTAAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * *
5273407 AAATGGAAACAACCAGGATTAAAGCATCAA-TCAAAAAAAGAAAAACGATCAGGATTAAACCAT-
66 AAAT-GAAA-ATCAAGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
*
5273470 AGGTTAGAAAATG
127 A-GTCAGAAAATG
* * * * * *
5273483 AAAATGATCGAGATTAAACTATGAGTCAAAAAATGAAAATGACT-GACAATAAACCACAAGTCAT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * *
5273547 AAAATGAAAATGCGAGGGATTAAACCACGAGTCAAAAAATGAAAATGATC-GAGATTAAACCACT
65 AAAATGAAAAT-C-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA-T
*
5273611 -AG-CGAGAAAAAAG
126 GAGTC-AG-AAAATG
** * *
5273624 AAAACAACCGAGATTAAA-CATTGAGTCAGAAAATGAAAACGATTAG-GATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * ** * * *
5273687 AAAAATGAAAAT----GATTGAA--A-AA-T-GAAAAA--AAATTGATCAGGACTAAGCCACGAG
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
*
5273741 TTAGAAAATG
129 TCAGAAAATG
* * * * * * ** *
5273751 --AATGCAACTAGTTTGAATCATGAGTCA-AGAAATGAAAATGACT-GGGATTAAAGTACGAGTT
1 AAAATG-ATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * ** * * ** * *
5273812 AAAAAATAAAAAACAACCTGGATTAAACCATGAGTTAGAAAACAAAAACAAGT-GGGATTAAA-C
63 AAAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACC
*
5273875 ATTGAGTCAGAAAAAG
124 A-TGAGTCAGAAAATG
* * * * * * * * * * *
5273891 AAAATGACCTATATTAAAGCACGAGCCAAAAAATGGAAATGACTA-AGATTAAACCATGATTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
** * * * * *
5273955 AAAATGAAAATGACCGGGATTAAACCACCAGTCAGAAAA--AAAATGAACAGGATTAAACCGTGA
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5274018 GTCA-AGAAATG
128 GTCAGA-AAATG
* * * * * * * *
5274029 AAAATGACTGGA-ATTAAGCTACGAGTTAGAAAATGAGAACGATA-A-A--AAA--ATGA---AA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * ** * * * *
5274084 AAGA--AAAATGATTGGGATTAAACCATGAGTCAGAAAATGAATGCGATCGGGTTTAAATCGTGA
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5274147 GTCA-AGAAATG
128 GTCAGA-AAATG
* * * * * * ** * * *
5274158 AAAACGATCGTGATTAAAACACGAGTCAAAAAATGAAGAACGACCGAGATTAAATCGCAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC--
* * * * *
5274223 AAAAACAAAAATGAAGAA-CGACCGAGATTAAATCC-CGAGTCAGAAAAATGAAAACAATAAAGA
63 ----A-AAAAATGAA-AATC-A-AG-GATTAAA-CCACAAGTCA-AAAAATGAAAACGATCAGGA
* * * * *
5274286 ATAAATCACGAATCAAAAAAATG
117 TTAAACCATGAGTC-AGAAAATG
* * ** * * *
5274309 AAAATGA-CCAGGATTAAATCATGAGTCAGGGAA-CAAAA-GCA-ATGGGAATAAA--ATCGTAA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATG-ATA-GAGATTAAACCA-CG--A
* * *** * ** * *
5274368 GTCAAAAAATGAAAATGACCAA-AATTAAATCGTGAGTCAGAAAACAAAAAC-AACTGAGATTAA
60 GTCAAAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAA
* * *
5274431 ACTACGAGTCAAAAAATG
121 ACCATGAGTCAGAAAATG
** * * * * * *
5274449 AAAATGATC-AGGATTAAACTGTGAGTCAAAAAATGAAAACGATCGAG-TTAAATCACAAGTCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* ** * * ***
5274512 AAAATGAAAA-CAACCAGCG-TTAAATCATGAGTCAGAGAAATGAAAATGATCAATTTTAAATCA
65 AAAATGAAAATC-A--AG-GATTAAACCACAAGTCA-AAAAATGAAAACGATCAGGATTAAA-C-
*
5274575 CAT--GTCA-AAAATT
123 CATGAGTCAGAAAATG
* * * ** * * * *
5274588 AAAA--ACTACTGAGAATAAATCATGAGTCAGAAAATCAAAACCCCA-AAAAACTAAATCAC-AT
1 AAAATGA-T-C-GAGATTAAACCATGAGTCAGAAAATGAAAA--TGATAGAGATTAAACCACGA-
* * * * * * * * * **
5274649 GTTTAGAGAAATGAAAAATGATCGAAATTAAATCACGAGTTAAAAAATGAAAATGATTGGGATTA
60 G-TCA-AAAAATG-AAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTA
** *
5274714 AACTGTGAGTCAAAAAATG
120 AACCATGAGTCAGAAAATG
* * * * * * * * * * *
5274733 AAAATGACCTG-TATTAAACTACGAGTTAGAAAATAAAAAAGATCGAGATTAAACCGCGTGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** * *
5274797 AAAATGAAAACGATCGAA--ATTAAACCATGAGTCAAAAAATGAAAACGACCAGGATTAAACCAC
65 AAAATG-AAA--ATC-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* *
5274860 AAGTCAAAAAATG
126 GAGTCAGAAAATG
** ** * * ** * ** * * * *
5274873 AGTACAATCGAGTTTAAATCGCGAGTTA-AGAAATGAAAACAATCGGGATTAAATCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5274937 GAAATGATAA-CGACTGAGATTAAATCACGAGTC-AAAAATAAAAAATGATCGGGATTAAATCAC
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAGGATTAAACCA-
*
5275000 T-AGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * *
5275013 AAAACGAT-AAGGATTAAACCATGAGTCAGAAAATGAAAATGATCGAGATTAAACCACTAGTCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA-
* * ** * * * *
5275077 AAAAAGGAAAA-CGATCGAGATTAAA-CATTGAGTCAGAAAACGAAAACGAT-TGATATTAAACC
64 AAAAATGAAAATC-A-AG-GATTAAACCA-CAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
* *
5275139 ACGAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * * * *
5275154 AAAATGATC---A--AAA--AT---T-A-AAAA--AAAATTGATCGGGACTAAACCACGAGTTAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAA-TGATAGAGATTAAACCACGAGTCAA
** * * * * ** * * * ** *
5275205 AAAATGAATGTGACCA-GTTTGAATCATGAGTCAAGAAATGAAAATGA-CTGGGATTAAAGTACG
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCATG
* *
5275268 AGTTAAAAAATG
127 AGTCAGAAAATG
** * * ** * * **
5275280 AAAAACAACCTG-GATTAAACCACGAGTCA-AAAATGAAAACAAGT-GGGACTAAA-CATTAAGT
1 -AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCA-CGAGT
* * * * * * * *
5275341 CAGAAAAA-GAAAATGACCTA-GATTAAAGCACGAGCCAGAAAATGGAAACGA-CTAAGACTAAA
62 CA-AAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAA
5275403 CCATGAGTCAGAAAATG
122 CCATGAGTCAGAAAATG
* * ** * * * * **
5275420 TAAATGACCGAGATTAAACCACCAGTCAAAAAAAGAAAAATGA-ACAGGATTAAATCGTGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGA-GATTAAACCACGAGTCA
** * * * * * * * *
5275484 GGAAATGAAAATGACTGGAATTAAGCTACGAGTTAGAAAATGAGAACGAT-A--A--AAA--AT-
64 AAAAATGAAAATCA-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
*
5275541 --T--GAAAAAG
127 AGTCAGAAAATG
* * *** * **
5275549 AAAAATGATTTG-GATTAAACCATAAGTCAGAAAATGAATGCGATCAG-GTTTAAATTACGAGTC
1 -AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTC
* * * *
5275612 AAGAAATGAAAA-CGATCGTGATTAAAACACAAGTCAAAAAATGAAGAACGA-CCGAGATTAAAT
63 AAAAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAA-AACGATCAG-GATTAAA-
* *
5275675 CGCA--AGTCAAAAAAAAG
122 C-CATGAGTC-AGAAAATG
* * ** * * ** * * **
5275692 AAAAATGA-CGCGGATTAAACCGTGAGTTGGAAGATGAAAACGACGGGGATTAAATCGTGAGTCA
1 -AAAATGATCG-AGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * * *
5275756 AAAAATGAAAA-CAACCCAGATTAAATCACAAGTCAAAAAATGAAAAGGA-CTGAATTAAACCAC
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5275819 AAGTCAGAAAATG
126 GAGTCAGAAAATG
* * * * ** * * * *
5275832 AAAACGATTGGGATTAAACTAACCA-TTAAAAAAAGAAAAATGATAGGGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAAC-CATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA
* * * * * * * *
5275896 AAAAATGAAAAAAGACCACGATTAGA-CGCGAGTCAAAAAATGAAAATGA-CTACGATTAAACCA
64 AAAAATG--AAAA-TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
*
5275959 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* ** * ** ** * *
5275973 AAAATAATCCTGATTAAGCCATGAGTCAGAAAATGAAAAATGACCGTCATTAAATCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA-
* * * * * * * * * * *
5276038 AGAAATGAAAATGATCGATATTAAATCACATGTC-AAAAATCAAAAACTA-CTGAGAATAAATCA
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAG-GATTAAACCA
*
5276101 TGAGTCAAAAAATCG
125 TGAGTCAGAAAAT-G
** * * * * * * * ** *
5276116 -AAACCACCGAAACTAAATCACAT--GTCAGAGAATGAAAAATGATCGAAATTAAATCATAAGTT
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTC
* * * **** * * * * * *
5276178 AAAAAATAAAAATGATCGGGATTAAACTGTGAGTC-AAAAATGAAAATGACCCGTATTAGACTAT
63 AAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* *
5276242 GAGTTAGAAAATAA
126 GAGTCAGAAAAT-G
* * * ** * * * * *
5276256 AAAAT-ACCAAGATTAAATCGCGAGTCAAAAAATGAAAACGATTGAGATTAAATCATGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * **
5276320 AAATGAAAA-CGACCAGGATTAAACGACGAGTCAAAAAATGAATACAATCAGGTTTAAATCGCGA
66 AAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5276384 GTTA-AGAAATG
128 GTCAGA-AAATG
** * * * ** *
5276395 AAAACAATC-AGATTAAATCATGAGTCAGGAAATGACAACAACT-GAGATTAAATCACGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA-
* * * * * * *
5276458 AAATAA--AAAATGATCGGGATTAAATCACTAGTCAAAAAATGAAAACGATAAGGATCAAACCAC
64 AAA-AATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
5276521 GAGTCAGAAAATG
126 GAGTCAGAAAATG
* * * *
5276534 AAAATGACCGAGATTAAACCACT-AG-CTAGAAAAAGAAAAATGATCGAGATTAAA-CATTGAGT
1 AAAATGATCGAGATTAAACCA-TGAGTC-AGAAAATG-AAAATGATAGAGATTAAACCA-CGAGT
* * * ** *
5276596 CAGAAAATGAAAATGATTGGGATTAAACCATTAGTCAGAAAATGAAAACGATC--GA--AAA--A
62 CAAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
5276655 T--G--A-AAAA--
125 TGAGTCAGAAAATG
* * ** * ** * * * * *
5276662 AAAATGATCGGGACTAAACCACCAGTTAGAAAATG--AATGCGACCAGTTTGAATCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA-GAGATTAAACCACGAGTCAA
* ** * * * *
5276725 GAAATGAAAAT-AACTGGGATTAAAGTACAGGTTAAAAAATGAAAAACAACCTA-GATTAAACCA
65 AAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATG-AAAACGATC-AGGATTAAACCA
5276788 TGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * *
5276802 AAAATAAGT-GGGATTAAA-CATTGAGTCAGAAAAAGAAAATGACCTA-A-ATTAAAGCACGAG-
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGA--TAGAGATTAAACCACGAGT
* * *** * * *
5276862 CTAGAAAATGAAAA-CGACTAAGATTAAACCTTGAGTC-AAAAATTAGAAATGATCGGGATTAAA
62 C-AAAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGA-AAACGATCAGGATTAAA
*
5276925 CCACT-AGTCA-AAAAAG
122 CCA-TGAGTCAGAAAATG
* * * ** * * *
5276941 AAAAATGAAC-AGGATTAAACCGTGAGTCAGGAAATGAAAATGGCCAGA-ATTAAGCTACGAGTT
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAAT-GATAGAGATTAAACCACGAGTC
* ** * * * **
5277004 AGAAAATGGGAA-C---GA-TAAA--A-AAAT-GAAAAA-GAAAAATGATTGGGATTAAACCATG
63 AAAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
*
5277059 AGTCAAAAAATG
127 AGTCAGAAAATG
**** * * * * * * * * * *
5277071 ATTGCGATTGGGTTTAAATCACGAGTCA-AGAAATGAAAACGATCGTGATTAAAACATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5277135 AAAATGAAAAACGATCGAGATTAAATCGCAAATCAAAGAAATGAAAATGA-CCGCGAATAAACCG
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAA-AAATGAAAACGATCAG-GATTAAACCA
*
5277199 CGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * ** * * * *
5277213 AAAA-GAACCCAGATTAAACCACAAGTCAGAAAATAAAAACGACCAG-GATTAAACCACAAGTCA
1 AAAATG-ATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * ** * * *
5277276 GAAAAT-AAAAACGATTGGGATTAAAATACCCA-TCAAAAAAAGAAAAATGAT-AGGGATTAAAC
64 AAAAATGAAAATC-A--AGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCA-GGATTAAAC
* * *
5277338 AACGAGTCAAAAAATG
123 CATGAGTCAGAAAATG
* * * * * * *
5277354 AAAATGATC-AGGATTAAACCGTGAGTCAAAAAATGAAAACGATCGAGATTAAATCACAAGTCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * *
5277418 AAAATGAAAAAT-AATCGTCATTAAATCATAAGTCAGAGAAATGAAAATGATC-GATATTAAATC
65 AAAATG-AAAATCAA--G-GATTAAACCACAAGTCA-AAAAATGAAAACGATCAG-GATTAAA-C
5277481 ACAT--GTCA-AAAATTG
123 -CATGAGTCAGAAAA-TG
* * * * * * * * * * *
5277496 AAAACT-A-CTTAGAATAAATCATGAGTGAAAAAACGAAAACGA-AAAGGATTAAATCACTAGTG
1 AAAA-TGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTC
* *
5277558 AAAAAATGAAAA-CGATAAGGATTAAACCACGAGTCAAAAAATGAAAATGATC-GAGATTAAACC
63 AAAAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
* *
5277621 ATTAG-CTAGAAAAAGG
124 ATGAGTC-AG-AAAATG
* * * * * **
5277637 AAAACGATCGAGATTAAA-CATTGTGTCAGAAAATGAAAACGAT-CA-A--AAA--ATGA-AAAA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * ** * * * *
5277694 AAAATG---ATCGA-GACTAAACCACGAGTTAGAAAATGAATGCGACCA-GTTTGAATCATGAGT
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
5277754 CA-AGAAATG
130 CAGA-AAATG
* * ** ** * * * ** * *
5277763 AAAAT-AACTGGGATTAAAGTACAAATTAAAAAATGAAAAACA-ACCTAGATTAAACCATGAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTC
* * ** * *
5277826 AGAAAACGAAAA-CAAGTGGGATTAAA-CATTGAGTCAGAAAAA-GAAAATGACCTA-GATTAAA
63 AAAAAATGAAAATCAA---GGATTAAACCA-CAAGTCA-AAAAATGAAAACGATC-AGGATTAAA
* * *
5277887 GCACGAGCCAGAAAATG
122 CCATGAGTCAGAAAATG
* * * * * * * *
5277904 GAAACGA-CTAAGATTAAACCTTGAGTCA-AAAATTAGAAATGATCGGGATTAAACCACTAGTCA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGA-AAATGATAGAGATTAAACCACGAGTCA
* * *** ** * * * * *
5277967 AAAAAAGAAAAATGAACAGGATTAAACCGTGAGTCAGGAAATGAAAATGA-CCGAATTTAAATCG
64 AAAAATG-AAAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGA-TTAAACCA
5278031 TGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * *
5278045 AAAATGATCGAGATTAAACCATG-GTCAAAAAATGAAAACGACCAG-GATTAAACCACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * *
5278108 AAAATGAATACAATC-GGGTTTAAATCACGAG-CTAAGAAATGAAAACAATC-GAGATTAAATCA
65 AAAATG-A-A-AATCAAGGATTAAACCACAAGTC-AAAAAATGAAAACGATCAG-GATTAAACCA
5278170 TGAGTCA-AGAAATG
125 TGAGTCAGA-AAATG
* * * ** * * * *
5278184 ACAATGA-CTGAGATTAAATCATGAGTTAGAAATAAAAAAATGATCGGGATTAAATCACAAGTCA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAA-ATGAAAATGATAGAGATTAAACCACGAGTCA
* ** * * *
5278248 AAAATTGAAAA-CGATAAGGATTAAACCATGAGTCAGAAAATGAAAATGAT-TGAGATTAAACCA
64 AAAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
*
5278311 CT-AG-CTAGAAAAAGG
125 -TGAGTC-AG-AAAATG
* * * * *
5278326 AAAACGATCAAGATTAAA-CATTGAGTCAG-AAACGAAAACGATTTG-GATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * *
5278388 AAAAATGAAAA-CGAGCG---AAA--A-AA-T-GAAAAA--AAAATGATC-GTGACTAAACTACG
64 AAAAATGAAAATCAAG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
*
5278441 AGTTAGAAAATG
127 AGTCAGAAAATG
*** * * * * * * ** *
5278453 AATGCGA-CAAGTTTGAATCATGAGCCA-AGAAATGAAAATGACT-GGGATTAAAGTACGAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * *
5278515 AAAAATGAAAAAT-AACCTGGATTAAACCACGAGTCAGAAAACGAAAACAAGT-GGGATTAAA-C
64 AAAAATG-AAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACC
*
5278577 ATTGAGTCAGAAAAAG
124 A-TGAGTCAGAAAATG
* * * * * * *
5278593 AAAATGACCTAGATTAAAGCACGAGCCAGAAAATGAAAACGACTA-AGATTAAACCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA-
* ** * * *
5278657 AAAATTG-AAATGACCGGGATTAAACCACCAGTCAGAAAAA-GAAAAATGAACAGGATTAAACCA
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTCA-AAAAATG-AAAACGATCAGGATTAAACCA
*
5278720 TGAGTCAGGAAATG
125 TGAGTCAGAAAATG
* * * * * * *
5278734 AAAATGACTGGA-ATTAAGCTACGAGTTAGAAAATGAGAATGATA-A-A--AAA--ATGA---AA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * *** ** * * * *
5278789 AAGA--AAAATGATTGGGATTAAACCGTGAGTCAGAAAAA-GAATGCGATCGGGTTTAAATCACG
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCA-AAAAATGAAAACGATCAGGATTAAACCATG
5278851 AGTCA-AGAAATG
127 AGTCAGA-AAATG
* ** * * * * ***
5278863 AAAATGATCGTGATTAAAAGACGAGTCAAAAAATGAAGAATGATTGAGATTAAATCGTAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC-A
* * * *** * * * * *
5278928 AAAAATGAAAATGATCACGATTAAATCGTGAGTCGAAAGATAAAAACGA-CGGGGATTAAACCGT
64 AAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5278992 AAGTCA-AAAATG
126 GAGTCAGAAAATG
** * * ** * * * * * *
5279004 AAAACAACCCAGATTAAACCACAAGTCAAAAAATGAAAACGATTGGGATTAAACTACCCA-TCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCA-CGAGTCAA
* * ** * * * *
5279068 AAAAAGAAAAATGATAGGGATTAAACCATGAGTCAAAAAATGAAAAAGGACCACGATTAAACCAC
65 AAAATG-AAAATCA-A-GGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCAT
* *
5279133 G-GATGAAAAAATG
126 GAG-TCAGAAAATG
* * * * * *** * * *
5279146 AAAATGA-CTATGATTAAGCCATGAGTCAAAAAATAAAAATAATCCTGATTAAGCCATGAGTCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * **
5279210 AAAATGAAAA-CGAGCCAGATTAAACCACAAGTCAAAAAATGGAAACAACCAGGATTAAACCACC
65 AAAATGAAAATCAAG---GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
* *
5279274 AGTCAAAAAAAG
127 AGTCAGAAAATG
* * * * *
5279286 AAAAACGATC-AGGATTAAACCATGGGTCAGAAAATGAAAATGATCGAGATTAAACTATGAGTCA
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * * * * *
5279350 GAAAATGAAAATGACTGAGAATAAACCACGAGTCATAAAATGAAAATGCGA--GGGATTAAA--T
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAA--CGATCAGGATTAAACCA
* *
5279411 TGCGTCTTAGATAATG
125 TGAGTC--AGAAAATG
** * * * ** * ** * * ** *
5279427 AAAACAACCAAAATTAAATTACGAGTCAGAAAATGAAAACAACA-AGGATTAAATCATAAATCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCA-
* * ** ** * *** * *
5279491 AAAAAAGAAAATGACCACAATTAAATCC-TGAGTTAGGGAA-CAAAAGCGAT-GGGAATTAAACC
64 AAAAATGAAAAT--CAAGGATTAAA-CCACAAGTCAAAAAATGAAAA-CGATCAGG-ATTAAACC
* *
5279553 GTAAGTCA-AGAAATG
124 ATGAGTCAGA-AAATG
* * * * * * ** ** *
5279568 AAAATGACCAAAATTAAATCGTGAGTCAAAAAACAAAAACAATCGAGATTAAACCACGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * ** * *
5279633 AAATAAAAATGATCAGGATTACACCATGAGTCAAAAAATGAAAACGATC-GAGATTAAATCATAA
66 AAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATGA
*
5279697 GTCAGAAAAAG
128 GTCAGAAAATG
* * ** * * * *
5279708 AAAAATAACCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATCGATATTAAATCAC-ATGTC
1 -AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGA-GTC
* * ** * * * * * *
5279772 -AAAAATAGAAAACTACTAA-GAATAAATCATGAGTCAGAAAATCAAAACCA-CCGAAACTAAAT
63 AAAAAAT-GAAAA-T-C-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAA-
* *
5279834 CACAT--GTCAGAGAACG
122 C-CATGAGTCAGAAAATG
* * * * * * ****
5279850 AAAAATGATTGAAATTAAATCACGAGTTA-AGAAATGAAAATGACCAG-GATTAAATTGTGAGTC
1 -AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTC
** * * * * * * * *
5279913 AAAAAATGAAAATGACCTGTATTAAACTACGAGTTAGAAAATAAAAAAGATC-GAGATTAAACTA
63 AAAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
5279977 TGAGTCAG-AAATG
125 TGAGTCAGAAAATG
** * * * **
5279990 AAAATGA-CAGAGATTAAAGTACGAGTTAAAAAATGAAAAACA-ACCTG-GATTAAACCACGAGT
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATA---GAGATTAAACCACGAGT
* * * * ** * *
5280052 CAGAAAA-CAAAAACTAGTGAGATTAAA-CATTGAGTCAGAAAAA-GAAAATGACCTA-GATTAA
62 CAAAAAATGAAAATC-A-AG-GATTAAACCA-CAAGTCA-AAAAATGAAAACGATC-AGGATTAA
** **
5280113 AGGACAAG-CTAGAAAATG
121 ACCATGAGTC-AGAAAATG
* * * * * * *
5280131 GAAACGA-CTAAGATTAAACCATGAGTCAGAAAAT-AGAAATGATCGGGATTAAACCACCAATCA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGA-AAATGATAGAGATTAAACCACGAGTCA
* * *** ** * * * *
5280194 GAAAAA-GAAAAATGAACAGGATTAAATCGTGAGTCAGGAAATGAAAATGA-CTGGAATTAAGCA
64 -AAAAATG-AAAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAACC
* *
5280257 ACGAGTTAG-AAATG
124 ATGAGTCAGAAAATG
* * * *
5280271 AGAACGAT--A-A--AAA--A--A-T--GAAAAAGAAAAATGATTAG-GATTAAACCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * * * *
5280323 AAAAATGAACGCGATC-GGGTTTAAATCACGAGTCAAGAAATGAAAATGATC-GTGATTAAAACA
64 AAAAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
* *
5280386 CGAGTCAAAAAATG
125 TGAGTCAGAAAATG
** * ** * **
5280400 AAGAACAATCGAGATTAAATCGCA--AGTCAAAAAAATGAAAATGACGGGGATTAAACCGTGAGT
1 AA-AATGATCGAGATTAAA-C-CATGAGTC-AGAAAATGAAAATGATAGAGATTAAACCACGAGT
* * * * *
5280463 CAAAAAATGAAAA-CAACCCGGATTAAACCATAAGTTAGAAAATGAAAACGACCACGATTAAACC
62 CAAAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
** *
5280527 ACAAGTTAGAAAATG
124 ATGAGTCAGAAAATG
* * * * ** * * *
5280542 AAAACGATTGGGATTAAACTACCCA-ACA-AAAAAGAAAAATGATAGGGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA
* * * * * * * * *
5280605 AAAAATAAAAAAGGACCACGATTAGACTACGAGTCAGAAAATGAAAACGAGCCA-GATTAAACCA
64 AAAAAT-GAAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
** *
5280669 CAAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * * ** * * * * *
5280683 GAAA-CAACCAGGATTAAACCACCAGTCAAAAAAAGAAAAACGATCAGA-ATTAAACCATGGGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATG-AAAATGAT-AGAGATTAAACCACGAGTC
* * * * ** * * * *
5280746 AGAAAATGAAAATGATCGAGATTAAACTATGAGTCAGAAAATGAAAATGA-CTGAGAATAAACCA
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
* *
5280810 CGAGTCATAAAATG
125 TGAGTCAGAAAATG
* * * ** * * **
5280824 AAAATG--CGAGGGATTAAA--TTGCGTCTTAGATAATGAAAACAACCA-AAATTAAATTACGAG
1 AAAATGATCGA--GATTAAACCATGAGTC--AGAAAATGAAAATGA-TAGAGATTAAACCACGAG
* * * * * * * * **
5280884 TCAGAAAATGAAAACAACAAGGATTAAATCATAAATCAGAAAAAAGAAAATGACCACAATTAAAT
61 TCAAAAAATG-AAA-ATCAAGGATTAAACCACAAGTCA-AAAAATGAAAACGATCAGGATTAAA-
* ** *
5280949 CC-TGAGTTAGGGAA-C
122 CCATGAGTCAGAAAATG
* * * * * * * **
5280964 AAAAGCGAT-GGGAATTAAACCGTAAGTCA-AGAAATGAAAATGACCA-AAATTAAATCGTGAGT
1 AAAA-TGATCGAG-ATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGT
* * * * * *
5281026 CAAAAAA-CAAAAACAATCGAGATTAAACCACGAGTCAAAAAATAAAAATGATCAGGATTACACC
62 CAAAAAATGAAAATCAA--G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
*
5281090 ATGAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * * * * ** ** * *
5281105 AAAACGATCGAGATTAAATCATAAGTCAGAAAAAGAAAAATAACCGTCATTAAATCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA-
* * * * * * * * * *
5281170 AGAAATGAAAATGATCGATATTAAATCACATGTC-AAAAATAGAAAACTA-CTAAGAATAAATCA
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATC-AGGATTAAACCA
*
5281233 TGAGTCAGAAAATC
125 TGAGTCAGAAAATG
** * * * * ** * * * * *
5281247 AAAACCACCGAAACTAAATCACAT-A-TTAGAGAAGGGAAAATGACAAAAATTAAATCACGAGTT
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTC
* * * ** ** * * * *
5281310 AAAAAATAAAAATGATCGAGATTAAATTATGAGTCAAAAAATGAAAATGACCCGTG-TTAAACTA
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
* * *
5281374 CGAGTTAGAAAATA
125 TGAGTCAGAAAATG
* * * * * ** * *
5281388 AAAAAGACCAAGATTAAACTATGAGTCAAAAAATGAAAATGACCGACATTAAACCATGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * *** * * * * * *
5281453 AAATGAATACAATC-GGGTTTAAATCGTGAGTTAAGAAATGAAAACAATCGGGAATAAATCATGA
66 AAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5281517 ATCA-AGAAATG
128 GTCAGA-AAATG
* * * * * * * *
5281528 ACAACGA-CTGAGATTAAATCACGAGTCAG-AAATAAAAAATGATCGAGATTAAATCACTAGTCA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGATAGAGATTAAACCACGAGTCA
* * *
5281591 AAAAATGAAAATGATAAGGATTAAACCACGAGTCAAAAAATGAAAATGATC-GAGATTAAACCAC
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA-
5281655 T-AG-CTAGAAAAATG
125 TGAGTC-AG-AAAATG
* * * * * * *
5281669 AAAACGACCGAGATTAAA-CAGTGACTTAGAAAATGAAAACGATTGAGATTAAACCACGAGTCAG
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * *
5281733 AAAATGAAAA-C---GATCAAA--A-AA-TGAAAAAA--AAAAAGATCGGGACTAAACCACGAGT
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
*
5281788 TAGAAAATG
130 CAGAAAATG
*** * * * * * * ** * *
5281797 AATGCGA-CCAGTTTGAATCC-TGTGTCA-AGAAATGAAAATGACAGGGATTAAAGTACAAGTTA
1 AAAATGATCGAGATT-AAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * ** * *
5281859 AAAAATGAAAAACAACCTGGATTAATCCACGAGTCAGAAAACAAAAACAAGT-GGGATTAAA-CA
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
* *
5281922 TTGAGTCATAAAAAG
125 -TGAGTCAGAAAATG
* * * ** * * * * * * *
5281937 AAAATGACCTAGATTAAAGCACAAGCCAAAAAATGGAAACGACTA-AGATTAAACCATGAGTTAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * *
5282001 AAAATGAAAATGATCGGGATTAAACCACCAGTCAGAAAAA-GAAAAATGAAT-AGGATTAAACCA
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCA-AAAAATG-AAAACG-ATCAGGATTAAACCA
*
5282064 TGAGTCAGGAAATG
125 TGAGTCAGAAAATG
* * * * * * * * *
5282078 AAAATGATTG-GAATTAATCTACGAGTTAAAAAATGAGAAGGATA-A-A--AAA--ATGA---AA
1 AAAATGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * * *** * *
5282133 AAGA--AAAATGATTGGGATTAAACCATTAGCCAGAAAATGAGTGCGATC-GAGTTTAAATCATG
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
5282195 AGTCA-AGAAATG
127 AGTCAGA-AAATG
* * * * * * * * ***
5282207 AAAACGATCGTGATTAAAACAGGAGTCAAAAAATGAAGAACGATCGAGATTAAATCGTAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC-A
* * *** ** * * *
5282272 AAAAATGAAAATGATCGCGATTAAACCGTGAGTCGGAAGATGAAAACGA-CGGGGATTAAACCGT
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5282336 GAGTCAAAAAATG
126 GAGTCAGAAAATG
** * * ** * * * *
5282349 AAAACAACCCG-GATTAAAGCACAAGTTAGAAAATGAAAACGACCAG-GATTAAACCACAAGTCA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * *
5282412 AAAAATGAAAA-CGATTGAGATTAAACTACCCA-T-AAAAAA-AAAAATGAT-AGGGATTAAACT
64 AAAAATGAAAATC-A-AG-GATTAAACCA-CAAGTCAAAAAATGAAAACGATCA-GGATTAAACC
*
5282472 ATGAG-CAAAAAAATG
124 ATGAGTC-AGAAAATG
* * * * * * *
5282487 AAAAAAGA-CCACGATTAGACCACGAGTCAAAAAATGAAAATGACTA-TGATTAAACCATGAGTC
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * ** * * *
5282550 AAAAAATGAAAAAT-AATCCTGATTAAGCCATGAGTCAGAAAATGAAAATGAGCCA-GATTAAAC
63 AAAAAATG-AAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAAC
*** *
5282613 CGCAAGTCAAAAAATG
123 CATGAGTCAGAAAATG
* * * * * ** * * * * *
5282629 GAAA-CAACCAGGATTAAAGCACCAGTCAAAAAAAGAAAAACGATCAG-GATTAAACCATGGGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATG-AAAATGAT-AGAGATTAAACCACGAGTC
* * * ** * * * *
5282692 AGAAAATGAAAATGGTCGA-GATTAAACTATTAGTCAGAAAATGAAAATGA-CTGAGAATAAACC
63 AAAAAATGAAAA---TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
* *
5282755 ACGAGTCATAAAATG
124 ATGAGTCAGAAAATG
* * * ** * * * *
5282770 AAAATG--CGAGGGATTAGACC--GCGTCTTAGATAATGAAAACAACCA-AAATTAAATCACGAC
1 AAAATGATCGA--GATTAAACCATGAGTC--AGAAAATGAAAATGA-TAGAGATTAAACCACGAG
* * * *
5282830 TCAAAAAATGAAAACAACAAGGATTAAATCACAAATCAAAAAAATGAAAATGA-CGAGGATTAAA
61 TCAAAAAATG-AAA-ATCAAGGATTAAACCACAAGTC-AAAAAATGAAAACGATC-AGGATTAAA
* ** *
5282894 TCATGAGTCAGGGAA-C
122 CCATGAGTCAGAAAATG
* * * * * * **
5282910 AAAAGTGATAG-GAATTAAACCGTAAGTCA-AAAAGTGAAAATGACCA-AAATTAAATCGTGAGT
1 AAAA-TGATCGAG-ATTAAACCATGAGTCAGAAAA-TGAAAATGA-TAGAGATTAAACCACGAGT
* * * *
5282972 C-AAAAAT-AAAAACAATCGAGATTAAATCACGAGTCAAAAAATGAAAATGATCAGGATTAAACC
62 CAAAAAATGAAAATCAA--G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
*
5283035 ATGAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * ** ** ** * *
5283050 AAAACGATCGAGATTAAATCACAAGTCAGAAAATGAAAAACA-ACCGTCATTAAATCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTCA
* * * * * * * * * * *
5283114 GAGAAATGAAAATGATCGATATTAAATCACATGTC-AAAAATCAAAACTA-CTGGAGAATAAATC
64 -AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATC-AG-GATTAAACC
5283177 ATGAGTCAGAAAATCG
124 ATGAGTCAGAAAAT-G
** * * * * * * * * * *
5283193 -AAACCACCGAAACTAAATCACAT--GTCAGAGAACGAAAATAATTGAAATATAAATCATGAGGT
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATGAAAATGATAGAGAT-TAAACCACGA-G-
* * *** * * *
5283255 TAAAAAAATTGAAATGATCGA-GATTAAACGTGAA--CACAAAAATGGAAAATGA-CCGTATTAA
61 TCAAAAAA-TGAAA--ATCAAGGATTAAACCACAAGTCA-AAAAAT-GAAAACGATCAGGATT-A
* * * *
5283316 AACTATGAATTAG-AAATAA
120 AACCATGAGTCAGAAAAT-G
* * * * * *
5283335 AAAAAGA-CTGAGATTAAATCGTGAGTCA-AAAATG-AAACGATCGAGGACTT-AACCATGA-TC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA-GA-TTAAACCACGAGTC
* * * * ** * * *
5283395 -AAAATTGAAAATTACTTAGGATTAAAATCACGA-TTTAAAAATGAATAC--TCGGGTTATAAGA
63 AAAAAATGAAAA-T-C-AAGGATT-AAACCACAAGTCAAAAAATGAAAACGATCAGGAT-TAA-A
* * * *
5283456 TCAGCGAGTTAAAAAATG
122 CCA-TGAGTCAGAAAATG
*** * * * * * *
5283474 AAAGCAATC-AGGATTAAATCATGAGTCAGGAAATGACAACGACT-GAGATTAAATCACGAGTTA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
** * * * *
5283537 GAAATAA--AAAATGACTGGGATTAAATCACTAGTCAAAAAATGAAAACAATAAGGATTAAACCA
64 -AAA-AATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5283600 CGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * *
5283614 AAAATGACCGAGATTAAACCACT-AG-CTAGAAAAAGGAAAACGATCGAGATTAAA-CATTGAGT
1 AAAATGATCGAGATTAAACCA-TGAGTC-AG-AAAATGAAAATGATAGAGATTAAACCA-CGAGT
* * * ** * * *
5283676 CAGAAAATGAAAATGATTGGGATTAAACCATGAGTTAGAAAATGAAAACAATC--GA--AAA--A
62 CAAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
5283735 T--G--A-AAAA--
125 TGAGTCAGAAAATG
* * * * ** * * * *
5283742 AAAATGATCGGGACTAAACCACGAGTTAGAAAATG--AATGCGACCAGATTGAATCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA-GAGATTAAACCACGAGTCAA
* ** * * * * *
5283805 GAAATGAAAAT-AACTGGGATTAAAGTACGAGTTAAAAAATGAAAAACAACCTGGATTAAACCAT
65 AAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCAT
*
5283869 GAGTCAAAAAATG
126 GAGTCAGAAAATG
** * * *** * *
5283882 AAAACAAGT-GGGATTAAA-CATTGAGTCAGAAAAAGAAAATGACCTAGATTAAAGCACGAGCCA
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* ** * * * *
5283945 GAAAATGGAAACGA-CTAA-GATTAAACCATGAGTC-AGAAATTAGAAATGATCGGGATTAAACC
64 AAAAAT-GAAA--ATC-AAGGATTAAACCACAAGTCAAAAAATGA-AAACGATCAGGATTAAACC
*
5284007 ACT-AGTCAGAAAAAG
124 A-TGAGTCAGAAAATG
* * * * * * *
5284022 AAAAATGAATAG-GATTAAACCGTGAGTCAGGAAATGAAAATGATTG-GAATTAAGCTACGAGTT
1 -AAAATG-ATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAG-ATTAAACCACGAGTC
* * * * * **
5284085 AGAAAATGAGAA-C---GA-TAAA--A-AAAT-GAAAAA-GAAAAATGATTGGGATTAAACCATG
63 AAAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
5284140 AGTCAGAAAATG
127 AGTCAGAAAATG
*** * * * * * * * * * *
5284152 AATGCGATTGGGTTTAAATCACGAGTCA-AGAAATGAAAACGATCGTGATTAAAACATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * ** * * *
5284216 AAAATGAAGAA-CGACTGAGATTAAATCGTAAGTAAAAAAAATGAAAATGA-CCGTGATTAAACC
65 AAAATGAA-AATC-A-AG-GATTAAACCACAAGT-CAAAAAATGAAAACGATCAG-GATTAAACC
* * *
5284279 GTGAGTCAAAAAATT
124 ATGAGTCAGAAAATG
* * * ** *** * *
5284294 AAAATGA-CGGGGATTAAACAATGAGTCAAAAAATGAAAACAACCCAGATTAAACCACAAGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** ** *
5284358 AAAATGAAAA-CGACCAGGATTAAACCACAAGTCAAAAAATGAAAACGATTGGGATTAAAATACC
65 AAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA-T
* * *
5284422 CA-TCAAAAAAATA
126 GAGTC-AGAAAATG
* * * * * **
5284435 AAAATGATGGGGATTAAACGACGAGTCAAAAAATGAAAATGATCA-AGATTAAACCGTGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCAA
* * * * * * *
5284499 AAAATGAAAA-CGATCGAGATTAAATCACAAGTCAGAAAATGAAAAAC-AACCGTCATTAAATCA
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAACCA
* *
5284562 TAAGTTAGAGAAATG
125 TGAGTCAGA-AAATG
* ** * ** *
5284577 AAAATGATCGATATTAAATCACAT--GTCA-AAAATCGAAAACCACTTA-A-AATAAATAATGAG
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAAT-GAAAATGA--TAGAGATTAAACCACGAG
* * * * * * * * * * * * ** * * * *
5284637 TCAGAAAATCAAAACCACCGAAACTAAATCACATGTTAGAGAACGAAAAATAACCGAAATTAAAT
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAAC
* * *
5284702 CACGAGTTAAAAAATG
123 CATGAGTCAGAAAATG
* * ** * ** * * * *
5284718 AAAAGGA-CTGGGATTAAACTGTGAGTCAAAAAATGAAAATGACCCG-TATTAAACTATGAGTTA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * *
5284781 GAAGATAA-AAAAGATCGA-GATTAAATCGCGAGTCAAAAAATGAAAATGATC-GAGATTAAACC
64 -AA-A-AATGAAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
*
5284843 ATGAGTCAAAAAAATG
124 ATGAGTC-AGAAAATG
* * * * ** * * * * * * *
5284859 AAAACGA-CCAGGATTAAACCACGAGTCA-AAAATTGAATACAATCGGGTTTAAATCGCAAGTTA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAA-TGAAAATGATAGAGATTAAACCACGAGTCA
* * ** * * * *
5284922 AGAAATGAAAA-CAATCAGGATTAAATCATGAGTCAAGAAATGACAACGA-CTAAGATTAAATCA
64 AAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
* *
5284985 CGAGTCAG-AAATAA
125 TGAGTCAGAAAAT-G
* ** * * *
5284999 AAAATGA-CCAGGATTAAATAACT-AGTGAAAAAATGAAAACGATA-AGGATTAAACCACGAGTC
1 AAAATGATCGA-GATTAAACCA-TGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTC
* * * * * *
5285061 AGAAAATGAAAATGACCGAGATTAAACCACTAG-CTAGAAAAAGGAAAACGA-CTGAGATTAAA-
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTC-A-AAAAATGAAAACGATCAG-GATTAAAC
* *
5285123 CATTATGTCAGGAAATG
123 CATGA-GTCAGAAAATG
* * * * ** * ** * ** * *
5285140 AAAATGATTGAGAATAAACCACGAGTCATAAAATGAAAATGCGAGGGATTAGTCCGCGTCTTACA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
** * * * * * *
5285205 AAATGAAAA-CAACCAAAATTAAATCACGAGTCAAAAAATGAAAAC-AACAATGATTAAATCACG
66 AAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCATG
* *
5285268 AATCAAAAAAATG
127 AGTC-AGAAAATG
* * * ** * *** *
5285281 AAAATGACCAAGATTAAATCATGAGTCAGGGAA-CAAAAGTGATAG-GAATTAAACCGTAAGTGA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAA-TGATAGAG-ATTAAACCACGAGTCA
* * * * *** * * * * *
5285344 AAAAGTTAAAATGACCAA-AATTAAATCGTGAGTCAGAAAATAAAAAC-AACCGAGATTAAATCA
64 AAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
*
5285407 GGAGTCA-AAAATG
125 TGAGTCAGAAAATG
* * * ** * * * *
5285420 AAAATGATC-AGGATTAAATCGTGAGTCAAAAAATGAAAACCATCGAGATTAAATCACAAGTCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * * *
5285484 AAAATGAAAAACAACCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATC-GATATTAAATCA
65 AAAATGAAAATCAA--G-GATTAAACCACAAGTCA-AAAAATGAAAACGATCAG-GATTAAA-C-
5285548 CAT--GTCA-AAAATCG
123 CATGAGTCAGAAAAT-G
* * ** ** * * *
5285562 AAAACT-A-CTGAGAATAAATCATGAGTCAGAAAATCG-AAACCACCGAAACTAAATCAC-ATGT
1 AAAA-TGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGATAGAGATTAAACCACGA-GT
* * * * * * ** * * *
5285623 CAGAGAATGAAAAATGATCGAAATTAAATCATGAGTTAAAAAATGAAAATGATC-GAGACTAAAC
62 CAAAAAATG-AAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAAC
**
5285687 TGTGAGTCA-AAAATG
123 CATGAGTCAGAAAATG
* * * * * * * * ****
5285702 AAAATGACCCATATTAAACAACGAGTTAGAAAAT-AAAA-AATACCGAGATAAAATTGTGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTCA
* ** * * *
5285765 AAAAATGAAAA-CGATCGAGATTAAACCATGAGTCAAAAAATGAAAACGACCAGGATTAAATCAC
64 AAAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5285829 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* ** * * * * * ** * * *
5285842 AATACAATCGGGTTTAAATCGTGAGTTA-AGAAATGAAAACAATCTG-GATTAAATCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGAT-AGAGATTAAACCACGAGTCA
** * * * ** * *
5285905 GGAAATGACAA-CGACTGAGATTAAATCATGAGTCAGAAATAA--AAAATGATCGGGATTAAATC
64 AAAAATGAAAATC-A-AG-GATTAAACCACAAGTCA-AAA-AATGAAAACGATCAGGATTAAA-C
*
5285967 GC-T-AGTCAAAAAATG
123 -CATGAGTCAGAAAATG
* * * * ** *
5285982 AAAACGAT-AAGGATTAAACCACGAGTCAAAAAATGAAAATGACCGAGATTAAACCACTAG-CTA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC-A
* * * ** * **
5286045 GAAAAAGGAAAATGATCGAGATTAAA-CATTGAGTCAGAAAATGAAAACGATTGGGATTAAACCA
64 -AAAAATGAAAATCA-AG-GATTAAACCA-CAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5286109 CGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * *
5286123 AAAACGATC-A-A--AAA--ATGA---A-AAAA--AAAATGATCGAGACTAAACCACGAGTTAGA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * ** * * * ** *
5286176 AAATG--AATGCGACCA-GTTTGAATCATGAGTCAAGAAATAAAAATGA-CATGGATTAAAGTAC
66 AAATGAAAAT-C-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCA-GGATTAAACCAT
* *
5286237 GAGTTAAAAAATG
126 GAGTCAGAAAATG
** * * * * ** *
5286250 AAAAACAAC-ATGGATTAAACTACGAGTTAGAAAATGAAAACAAGT-GAGATTAAA-CATTGAGT
1 AAAATGATCGA--GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCA-CGAGT
* * * * * *
5286312 CAGAAAAA-GAAAATGACCTA-GATTAAAACACGAG-CTAGAAAATGGAAACGA-CTAAGATTAA
62 CA-AAAAATGAAAAT---CAAGGATTAAACCACAAGTC-AAAAAATGAAAACGATC-AGGATTAA
*
5286373 ACCATGAGTCAAAAAAT-
121 ACCATGAGTCAGAAAATG
* ** * * * *
5286390 AGAAATGACCG-GAATTAAACCACCAGTCA-AAAATCAAAA--ACTACTGAGAATAAATCATGAG
1 A-AAATGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGA-TA--GAGATTAAACCACGAG
* * * * * ** * * * * *
5286451 TCAGAAAATCAAAACCACCGAAACAAAATCACATA-TCAAAGAACGAAAA--ATGGCCGAAATTA
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACA-AGTCAAAAAATGAAAACGAT--CAG-GATTA
* * * *
5286513 AATCACGAGTTAAAAAATG
120 AACCATGAGTCAGAAAATG
* ** * * * * *
5286532 AAAATGATCGGGATTAAACTGTGAGTCAAAAAATGAAAATGACTCA-TG-TTAAACTACAAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-T-AGAGATTAAACCACGAGTCA
** * ** * * * *
5286595 GAAAATAAAAAAGATCGA-GATTAAACTGCGAGTCAGAAAATGAAAACGA-CTGACATTAAACCA
64 -AAAA-ATGAAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
*
5286658 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * ** * *
5286672 AAAATGA-CCAGAATTAAACCACGAGTC-GAAAAATGAAAAAAAAATCAG-GACTAAACCATGAG
1 AAAATGATCGAG-ATTAAACCATGAGTCAG-AAAATG--AAAATGAT-AGAGATTAAACCACGAG
* * * * * * ** * * *
5286734 TTAGAAAATG--AATGCGACCGGTTTGAATCATGAGTCAATAAATGAAAATGA-CTGGGATTAAA
61 TCAAAAAATGAAAAT-C-A-AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAA
** * * *
5286796 GTACGAGTTAAAAAATG
122 CCATGAGTCAGAAAATG
** * ** * * ** * *
5286813 AAAAACAACCTGCATTAAACCACGAGTCAAAAAATGAAAACAAGT-GGGATTAAA-CATTGAGTC
1 AAAATGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCA-CGAGTC
* * * * * *
5286876 AGAAAAA-GAAAATGACCTA-GATTAAAGCACGAGCCAGAAAATGAAAACGA-CTAAGATTAAAC
63 A-AAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAAC
5286938 CATGAGTCAGAAAATG
123 CATGAGTCAGAAAATG
* * * ** * *
5286954 GAAATGACCGGGATTAAACCACCAGTCAGAAAGA-GAAAAATGA-ACAGGATTAAACCATGAGTC
1 AAAATGATCGAGATTAAACCATGAGTCAGAAA-ATG-AAAATGATAGA-GATTAAACCACGAGTC
** * * * * * * *
5287017 AGGAAATGAAAATGACTAA-AATTAAGCTACGAGTTAGAAAATGAGAACGAT-A--A--AAA--A
63 AAAAAATGAAAAT--C-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5287074 --A-T--GAAAAAG
125 TGAGTCAGAAAATG
* * *** * * * * *
5287083 AAAAATGATTGGGATTAAACCATGAGTCAGAAAATGAATGCGATCGGGTTTAAATCATGAGTCAA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * ** ** * * *
5287148 GAAATGAAAA-CGATCGTGATTAAAATATGAGTCAAAAAATGAAGAACGA-CCGAAATTAAACCG
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAA-AACGATCAG-GATTAAACCA
** * *
5287211 CAAGTCAAAAAAATA
125 TGAGTC-AGAAAATG
* * * * ** * * * * * **
5287226 AAAATAACCGCGTTTAAACTGTGAGTCGGAAGATGAAAACGA-CGGGAATTAAACCGTGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAG-ATTAAACCACGAGTCAA
* * *
5287290 AAAATGAAAA-CAACCTAGATTAAACCACAAGTCAAAAAATGAAAACGACCAGGATTAAACCACG
65 AAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5287354 AGTCAGAAAATG
127 AGTCAGAAAATG
* * * * ** * * *
5287366 AAAACGATTGGGGTTAAA-C-T-ACCCATAAAA--AAAATGATAGGGATTAAACAACGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * *** * * * *
5287426 AAATGAAAAAGGACCACGATTAGACCATGGGTGAAAAAATGAAAATGA-CTATGATTAACCCATG
66 AAATG-AAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCATG
*
5287490 AGTCAAAAAATG
127 AGTCAGAAAATG
* ** * * * * *
5287502 AAAATAATCCTGATTAAGCCATGTGTCAGAAAATGAAAACGAGT-CAGATTAAACCACAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * *
5287566 AAAATGGAAATAACCAGGATTAAACCACCAGTCAAAAAAAGAAAAACAATTAGGATTAAACCAT-
65 AAAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
5287630 AGGTCAGAAAATG
127 A-GTCAGAAAATG
* * * * * *
5287643 AAAATGTTCGAGATTAAACTATGAGTTAGAAAATGAAAATGACT-GAGAATAAACCATGAGTCAT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * * * ** * *
5287707 AAAATGAAAATGTGAGGGATTAGACCGC--GTCTTAGATAATGAAAACAACCAAAATTAAATCAC
65 AAAATGAAAA--TCAAGGATTAAACCACAAGTC--AAAAAATGAAAACGATCAGGATTAAACCAT
*
5287770 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* * * * * * * *
5287783 AAAA-CAACAAGGATTAAATCACGAATCAGAAAAATGAAAATGACTA-AGATTAAATCATGAGT-
1 AAAATGATCGA-GATTAAACCATGAGTCAG-AAAATGAAAATGA-TAGAGATTAAACCACGAGTC
** * * * ** * ** *
5287845 AAGGGAA-CAAAAGCGATGGGAATTAAACCTTAAGTCAAAAAATGAAAATGA-CAAAAATTAAAA
63 AA-AAAATGAAAATC-A-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAAC
* *
5287908 CGTGAGTCAGAAAA-C
123 CATGAGTCAGAAAATG
** * * * * *
5287923 AAAAACAACTGAGATTAAATCACGAGTCAAAAAATGAAAATGATCA-AGATTAAACCATGAGTCA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCA
* * * * * *
5287987 AAAAATGAAAA-CGATCGAGATTAAATCACAAGTCAAAAAATGAAAAAC-AACCGTCATTAAATC
64 AAAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAACC
5288050 ATGAGTCAGAGAAATG
124 ATGAGTCAGA-AAATG
* * * * * *
5288066 AAACTGATCGATATTAAATCACAT--GTCA-AAAATCAAAA--ACTACTGAGAATAAATCATGAG
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATGAAAATGA-TA--GAGATTAAACCACGAG
* * * * * * * * * * * * **
5288126 TCAGAAAATCAAAACCACCGAAACTAAATCACATGTCAGAGAACGAAAAAAGA-CTAAAATTAAA
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATC-AGGATTAAA
* * * *
5288190 TCACGAGTTAAAAAATG
122 CCATGAGTCAGAAAATG
** * ** * ** *
5288207 AAAATGATCGAGATTAAACTGTGAGTCAAAAAATGAAAATGACCCG-TATTAAACTTCGAGTTAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA-
** * * * * ** * *
5288271 AAAATAAAAAAGATCGA-GATTAAATCACGAGTCAGAAAATGAAATTGACCAGGATTAAACCACG
64 AAAA-ATGAAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
*
5288335 AGTCAAAAAATG
127 AGTCAGAAAATG
* ** * * * * ** * ** * * * * *
5288347 AATACAATTGGGTTTAAATCGCGAGTTA-AGAAATGAAAACAATCGGGATTAAATCATGAATCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5288411 GAAATGACAA-CGACTGAGATTAAATCACGAGTCAGAAATAA--AAAATGACCGGGATTAAATCA
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCA-AAA-AATGAAAACGATCAGGATTAAACCA
*
5288473 CT-AGTCA-AAAACTA
125 -TGAGTCAGAAAA-TG
* * * ** * *
5288487 AAAACGATACG-GATTAAACCAGGAGTCAGAAAATAAAAATGACCGAGATTAAACCACTAGTTAG
1 AAAATGAT-CGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA-
* * * ** * * * *
5288551 AAAAAAGAAAATGACCGAGATTAAA-CATTGAGTCAGAAAATGAAAACCATTAGGATTAAACCAC
64 AAAAATGAAAATCA-AG-GATTAAACCA-CAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5288615 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* * * * *
5288628 AAAACT-ATC---A--AAA--A--A-T--GAAAA--AAAATGATCGGGACTAAACCACGAGTTAG
1 AAAA-TGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * * * **
5288678 AAAATG--AATGCGACCA-GTTTCAATCATGAGTCAAGAAATGAAAATGA-CTGGGATTAAAGTA
65 AAAATGAAAAT-C-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
* * *
5288739 CGAGTTAAAAAATG
125 TGAGTCAGAAAATG
** * ** ** ** * * *
5288753 AAAAACAACCTGA-ATTAAACCACAAGTCAGAAAACAAAAACAAGTGGCG-TTAAA-CATTGAGT
1 -AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCA-CGAGT
* * ** * * * *
5288815 CAGAAAAA-GAAAATGACCTA-GATTAAAGCATGAGCCAGAAAATGGAAACGA-CTAAGATTAAA
62 CA-AAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAA
5288877 CCATGAGTCAGAAAAT-
122 CCATGAGTCAGAAAATG
* * ** * * * * **
5288893 ATAAATGACCGGGATTAAACCACCAATCAGAAAAAGAAAAATGA-ACAAGATTAAATCGTGAGTC
1 A-AAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATA-GAGATTAAACCACGAGTC
* * * * * * * * *
5288957 AAAAAATGAAAATGACTGGAATTAAGCTACGAGTTAGAAAATGAGAACAAT-A--A--AAA--A-
63 AAAAAATGAAAATCA-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5289014 -A-T--GAAAAAG
126 GAGTCAGAAAATG
* * * * * *
5289023 AAAAATGATTGGGATTAAACCATGAGTCAGAAAATG--AATGCATCGGGTTTAAATCACGAGTCA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATG-ATAGAGATTAAACCACGAGTCA
* * * * * *
5289086 AGAAATGAAAATGATCGTGATTAAAACATAAGTCAAAAAATGAAGAACGA-CCGAGATTAAATCG
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAA-AACGATCAG-GATTAAA-C-
*
5289150 CA--AGTCAAAAAATTG
123 CATGAGTCAGAAAA-TG
* * * * * ** * *
5289165 AAAATTACCGTGATTAAACCGTGAGTC-GAAAGATGAAAACGACGGGGATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAA-ATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * **
5289229 AAAATGAAAA-CAACCCAGATTAAACCACAAGTCATAAAATGAAAACGACCAGGATTAAACCACA
65 AAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5289293 AGTCAGAAAATG
127 AGTCAGAAAATG
* * * ** * * * * *
5289305 AAAATGATTGGGATTAAACTACCAATGAAAAAAAGCAAAATGATAGAGATTGAACCACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * ** * *
5289370 AAAAAGAAAAAAGACCACGATTAGACCACGCGTCAAAAAATGAAAATGA-CTATGATTAAACCAT
65 AAAATG--AAAA-TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5289434 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* ** * *** *
5289447 AAAATAATCCTGATTAAGCCATGAGTCAGAAAATGAAAATGAGCCAGATTAAACCGC-ACGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGA-GTCAA
* * * * *
5289511 AAAATGGAAACAACCAGGATTAAACCACCAGTCAAAAAAAGAAAAACGATCAGGATTAAACTAT-
65 AAAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
5289575 AGGTCAGAAAATG
127 A-GTCAGAAAATG
* * *
5289588 AAAATGATCGAGATTAAACTATGAGTCAGAAAATGAAAATGACT-GAGAATAAACCACGAGTCAT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * *** * * * * * ** * * * *
5289652 AAAATGAAAATGTGAGGGATTAGATCGCGTTTTAGATAATGAAAACAACCAAAACTACATCACGA
65 AAAATGAAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5289717 GTCAGAAAATG
128 GTCAGAAAATG
* * * * * * * * * * *
5289728 AAAA-CAACAAGGATTAAATCACGAATCAAAAAAATGAAAATGACCAG-GGTTAAATCATGAGTC
1 AAAATGATCGA-GATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
*** * * * ** * * **
5289791 AGCGAA-CAAAAGCGATGGGAATTAAACCGTAAGTCAAAAAATGAAAATGACCAAAATTAAATCC
63 AAAAAATGAAAATC-A-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAA-CC
**
5289855 -TGAGTCAGAAAACA
124 ATGAGTCAGAAAATG
** * * * ****
5289869 AAAACAACCGAGATTAAACCATGAGTTAAAAAATGAAAATGATTAG-GATTAAACTGTAAGT-AA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * *
5289932 AAAACAGAAAA-CGATCGAGATTAAATCACAAGTCAAAAAATGAAAAAC-AACCGTCATTAAATC
65 AAAA-TGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAACC
5289995 ATGAGTCAGAGAAATG
124 ATGAGTCAGA-AAATG
* * * *
5290011 AAAATGATCGATATTAAATCACAT--GTCA-AAAATTGAAAACT-ACT-GAGAATAAATCATGAG
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAA-TGAAAA-TGA-TAGAGATTAAACCACGAG
* * * * * * * * * * * * *
5290071 TCAGAAAATCAAAACCATCGAAACTAAATCACATGTCAGAGAATGAAAAATGA-CTGAAATT-AA
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAA
* * *
5290134 CTCACGAGTTAAAAAATG
122 C-CATGAGTCAGAAAATG
* * ** * ** * * *
5290152 AAAATGACCGGGATTAAACTGTGAGTCAAAAAATGAAAATGACCCG-TATTAAACTACGAGTTAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * *
5290216 AAAATAAAAAAGATCGA-GATTAAACCGCGAGTCAAAAAATAAAAACGA-CCGAGATTAAACCAT
65 AAAAT--GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5290279 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* * * * * ** * * * * ** *
5290292 AAAACGACCAAGATTAAATCACAT--GTCAAAAAATGAATACAATCGGGTTTAAATCGTGAGTTA
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * ** * * * * *
5290355 AGAAATGAAAACAATCATA--ATTAAATCATGAGTCAAGAAATGACAATGA-CTGAGATTAAATC
64 AAAAATG--AA-AATCA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
* *
5290417 ACGAGTCA-AAAATAA
124 ATGAGTCAGAAAAT-G
* * * * * * * *
5290432 AAAATGACCGGGATTAAATCATGAGTCAAAAAATGAGAACGAGA-AGGATTAAACCACGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCAA
* * * * *
5290496 AAAATGAAAATGATCGAGATTAAACCACTAG-CTAGAAAAAGGAAAACGATC-GAGAGTAAA-CA
65 AAAATGAAAATCA-AG-GATTAAACCACAAGTC-A-AAAAATGAAAACGATCAG-GATTAAACCA
**
5290558 TTGAGTCAGAAAAAA
125 -TGAGTCAGAAAATG
** * * * ** * * ***
5290573 AAAACAATTGGGATTAAACCAAGAGTCAGAAAATGAAAACAAT-CA-A--AAA--ATGAAAAAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * ** * * * *
5290632 AAATG---ATC-GGGACTAAACCACGAGTTAGAAAATTAATGCGACCA-GTTTGAATCATGAGTC
66 AAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGTC
5290692 A-AGAAATG
131 AGA-AAATG
* ** * * * *
5290700 AAAATGA-CTGGGATTAAAGTA-GAGTTAAAAAATAAAAAATAACCT-G-GATTAAACCACGAGT
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGA--TAGAGATTAAACCACGAGT
* * ** * * *
5290761 CAGAAAACGAAAA-CAAGTGGGATTAAA-CATTGAGTCAGAAAAA-GAAAATGACCTA-AATTAA
62 CAAAAAATGAAAATCAA---GGATTAAACCA-CAAGTCA-AAAAATGAAAACGATC-AGGATTAA
* *
5290822 AGCACGAG-CTAGAAAATG
121 ACCATGAGTC-AGAAAATG
* * * * * * *
5290840 AAAATGA-CTAAGATTAAACCATAAGTTAGAAAATGGAAATGACT-GGGATTAAACCACCAGTTA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* *** ** * * *
5290903 GAAAAA-GAAAAAATGAACAGGATTAAACCGTGAGTCAGGAAATGAAAATGA-CTAGAATTAAGC
64 -AAAAATG--AAAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAAC
* * *
5290966 TACGAGTTAGAAAATG
123 CATGAGTCAGAAAATG
* * * * * *
5290982 AGAACGAT--A-A-TAAA--AT--G--A-AAAA-GAAAAATGATTGGGATTAAACCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * * * *
5291035 AAAATGAATGCGATC-GGGTTTAAAACACGAGTCAAGAAATGAAAACGAT-TGTGATAAAAACAC
65 AAAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5291098 GAGTCAAAAAAATG
126 GAGTC-AGAAAATG
* * * * * * * **
5291112 AAAAATGATCGAAATTAAATCGTAAGTCAAAAAAATGAAAATGATCGCGATTAAACCGTGAGT--
1 -AAAATGATCGAGATTAAACCATGAGTC-AGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* ***** *** * * ** *
5291175 -----TG-----GAA-GATTAAATTGTGAGTTGGAAGATGAAAATGATGGGGATTAAACCGTGAG
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
*
5291229 TCAAAAAATG
129 TCAGAAAATG
** * * ** * * **
5291239 AAAACAACCCAGATTAAACCACAAGTCAAAAAAATGAAAACGACTAG-GATTAAACCATAAGTCA
1 AAAATGATCGAGATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * * * *
5291303 GAAAATGAAAATGATTGGGATTAAACTACCAA-TGAAAAAAAGCAAAATGAT-AGAGATTGAACC
64 AAAAATGAAAATCA--AGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCAG-GATTAAACC
* * *
5291366 ACGAGTCAAAAAAAG
124 ATGAGTCAGAAAATG
* * * * * * * *
5291381 AAAAAAGA-CCACGATTAGACCACGCGTCAAAAAATGAAAATGACTA-TGATTAAACCATGAGTC
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * ** * *
5291444 AAAAAATTGAAAAT-AATCCTGATT-AAGCATGAGTCAGAAAAATGAAAAATGAGCA-GATT-AA
63 AAAAAA-TGAAAATCAA---GGATTAAACCACAAGTCA-AAAAATG-AAAACGATCAGGATTAAA
*
5291505 CC--GCACGTCAAAAAATG
122 CCATG-A-GTCAGAAAATG
* * * * ** * * * * *
5291522 GAAA-CAACCAGGATTAAACCACCAGTCA-AAAAAGAAAAACGATCAG-GATTAAACTATGGGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATG-AAAATGAT-AGAGATTAAACCACGAGTC
* * * * ** * ** * *
5291584 AGAAAATGAAAAATGATCGAGATTAAACTATGAGTC-AGAAATGAAAATTA-CTGAGAATAAACC
63 AAAAAATG-AAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
* *
5291647 ACGAGTCATAAAATG
124 ATGAGTCAGAAAATG
* * * * * * * *
5291662 AAAATG--CGAGGGATTAGACC--GCGCTTAGATAATGAAAA-CA-ACCAAATTAAATCACGAGT
1 AAAATGATCGA--GATTAAACCATGAG-TCAGAAAATGAAAATGATA-GAGATTAAACCACGAGT
* * * * * *
5291721 CAGAAAATGAAAACAACAAGGATTAAATC-GAA-TCAAAAAAATGAAAATGA-CTAGGATTAAAT
62 CAAAAAATG-AAA-ATCAAGGATTAAACCACAAGTC-AAAAAATGAAAACGATC-AGGATTAAAC
5291783 CATGAGTCAACGAAAA--
123 CATGAGTC-A-GAAAATG
* * * * * * * * ** *
5291799 AAAGTGAT-GGGAATTAAATCCGTAAGTCAAAAAATGAAAATGACCA-AAATT-AATCGTGAGTT
1 AAAATGATCGAG-ATTAAA-CCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* ** * * * *
5291861 AGAAAACCAAAA-CAACCGAGATTTAAACCACGAGCCAAAAAATG-AAATGATCAGGATTAAATC
63 AAAAAATGAAAATCAA--G-GA-TTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
* *
5291924 GTGAGT-AAAAAATG
124 ATGAGTCAGAAAATG
** * * ** * * ** ** * * *
5291938 AAAACCATCGAGATTACATCACAAGTCAAAAAATTAAAAACA-ACCGTCATTAAATCATGAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTCA
* * * * * * * * * *
5292002 GAGAAATGAAAATGATCGATATTAAATCACATGTCAAAAATTG-AAACTACTCA-GAATAAATCA
64 -AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
5292065 TGAGTCAGAAAAT-
125 TGAGTCAGAAAATG
* ** * * * * * ** * * *
5292078 CAAACCACCGAAACTAAATCACAT--GTCAGAGAACGAAAAATGACCGAAATTAAATCACGAGTT
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTC
* * **** * * * * * *
5292141 AAAAAATGAAAATGATCGGGATTAAACTGTTAGTCAAAAAATGAAAATGACCCGTATTAAACTAC
63 AAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* *
5292206 GAGTTAGAAAATA
126 GAGTCAGAAAATG
* ** * * * *
5292219 AAAACGATCGAGATTAAACCGCGAGTCAAAAAATGAAAATGATCGAGATTAAACCATGAGTGAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * ** * ** *
5292284 AAATGAAAA-CGATCAGGATTAAACCACGAGTCAAAAAATGAATACAATTGGGTTTAAA-TGTAA
66 AAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5292347 GTTA-AGAAATG
128 GTCAGA-AAATG
** * * * * * *
5292358 AAAACAATCGGGATTAAATCATGAGTCA-AGAAATGATAACGACT-GAGATTAAATCAGGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * *
5292421 GAAATAA--AAAATGACCGAGATTAAATCACTAGTCAAAAAATGAAAACGATAAGGATTAAACCA
64 -AAA-AATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5292484 CGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* ** * * * * *
5292498 AAAATGATCGAGATTAAACTACT-AACCAGAAAAAGGAAAACGATCGAGATTAAA-CATTGAGTT
1 AAAATGATCGAGATTAAACCA-TGAGTCAG-AAAATGAAAATGATAGAGATTAAACCA-CGAGTC
* * * * * * *
5292561 AGAAAACGAAAATGATTGATATTAAACCACAAGTTAGAAAATGAAAACGATCA--A--AAA--AT
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
5292620 --G--A-AAAA--
126 GAGTCAGAAAATG
* * * * * * ** * * * * *
5292626 AAATTTATCGGGACTAAACCACGAGTTAGAAAATG--AATGCGACCAGTTTGAATCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA-GAGATTAAACCACGAGTCAA
* ** ** * * * * * * *
5292689 GAAATGAAAATGACTGGGATTAAAGTACGAGTTAAAAAATAAAAAACAACCTGGATTAAACCACG
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAAT-GAAAACGATCAGGATTAAACCATG
*
5292754 AGTTAGAAAATG
127 AGTCAGAAAATG
** * * *** *
5292766 AAAACAAGT-G-GGTTAAA-CATTGAGTCAGAAAAAGAAAATGACCTAGATTAAAGCACGAG-CT
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC-
* ** * * *
5292827 AGAAAATGGAAACGA-CTAA-GATTAAACCATGAGTCAGAAAATGGAAATGATC-GAGATTAAAC
63 AAAAAAT-GAAA--ATC-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAAC
** *
5292889 CACCAGTCAGAAAAAG
123 CATGAGTCAGAAAATG
* * * * * * * *
5292905 AAAAATAAAC-AGGATTAAACCGTGAGTCAGGAAATGAAAATGACTGGA-ATTAAGCTACGAGTT
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * * **
5292968 AGAAAATGAAAA-C---GA-TAAA--A-AAAT-GAAAAA-GAAAAATGATTGGGATTAAACCATG
63 AAAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
*
5293023 AGTCAAAAAATG
127 AGTCAGAAAATG
*** * * * * * * *
5293035 AATGCGATCGGGTTTAAATCATGAGTCA-AGAAATGAAAACGATCGTGATTAAAACACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * *
5293099 AAAATGAAGAA-CGATTGAGATTAAATCATAAGTCAAAAAAATGAAAATGA-CTGCGATTAAACC
65 AAAATGAA-AATC-A-AG-GATTAAACCACAAGTC-AAAAAATGAAAACGATCAG-GATTAAACC
*
5293162 GTGAGTC-GAAAGATG
124 ATGAGTCAGAAA-ATG
* * * * * * ** *** *
5293177 AAAAGGATAGGGATTAAACCGTGAATCAAAAAATGAAAACAACCCAGATTAAACCACAAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * ** ** **
5293242 AAATAAAAACGGCAGGGATTAAACGACAAGTCAGAAAATGAAAACGATTGGGATTAAAATACCA-
66 AAATGAAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
* *
5293306 TCAAAAAAAG
129 TCAGAAAATG
* * * * * * * *
5293316 AAAAATGAT-AAGGATTAAACAACGAGTCAAAAAATGAAAAAGGACCACA-ATTAGACCACGAGT
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATG-AAAATGA-TAGAGATTAAACCACGAGT
* * * * ** ** ** *
5293379 TAAAAAATGAAAATGACTATGAATAAACCATGAGTCAAAAAATGAAAATAATCCTGATTAAGCCA
62 CAAAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5293444 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * *** * * *
5293458 AAAACGAGCCAGATTAAACCGCAAGTCAAAAAATGGAAAA-AACTAG-GATTAAACCACCAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAAT-GAAAATGA-TAGAGATTAAACCACGAGTCA
* * *** * ** *
5293521 AAAAAAGAAAAATGATCAGGATTAAACCATGGGTCAGAAAATGAAAGTGATC-GAGATTAAACTA
64 AAAAATG-AAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
* *
5293585 TAAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * * * ** * * * * ** * *
5293599 AAAATTA-CTGAGAATAAACTACGAGTCATAAAATGAAAATGCGAGGGATTAGATCGCGTCTTAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* ** * * * * * *
5293663 ATAATGAAAA-CAACCAAAATTAAATCACGAGTCAGAAAATGAAAAC-AACGAGGATTAAATCAC
65 AAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
* * *
5293726 GAATTAAAAAAAATG
126 G-AGT-CAGAAAATG
* * ** * * * ***
5293741 AAAATGA-CCAGGATTAAATCATGAGTCAGGGAA-CAAAAGCGAT-GGGAATTAAACCGTAAGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAA-TGATAGAG-ATTAAACCACGAGTC
**** * ** * * * * * **
5293803 AAAAAATGAAAATGACCCCTATTAAACTATGAGTTAGAAAATAAAAAAGAT-TGAGATTAAACTG
63 AAAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
* * * *
5293867 CGAGCCAAAAAATT
125 TGAGTCAGAAAATG
* * * * *
5293881 AAAACGATCGAGATTAAACCATGAGTCAAAAAATGAAAACGACCAG-GATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * * *
5293945 AAAATGAATACAATC-GGGTTTAAATCGCGAGTTAAAAAATGAAAACAATCAGGATTAAATCATG
65 AAAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5294009 AGTCA-AGAAATG
127 AGTCAGA-AAATG
* * * * ** * * ** *
5294021 ACAACGA-CTGAGATTAAATCACGAGTCAGAAATAAAAAAATGATCGGGATTAAGTCACTAGTCA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAA-ATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * * *
5294085 AAAACTGAAAA-CGATAAGGATTAAATCACGAGTCAGAAAATGAAAATGA-CCGTGATTAAACCA
64 AAAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
*
5294148 CT-AG-CTAGAAAAAGG
125 -TGAGTC-AG-AAAATG
**
5294163 AAAATGATCGAGATTAAA-CATTGAGTCAGAAAATGAAAACCATTAG-GATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * *
5294226 AAAAATGAAAA-C---GATCAAA--A-AA-T-GAAAAA--AAAATGATC-GACACTAAACCACGA
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATGA
*
5294279 GTTAGAAAATG
128 GTCAGAAAATG
* * * * * * * *
5294290 --ACT-A--GA-ATTAAGCTACGAGTTAGAAAATGAGAACGATA-A-A--AAA--ATGA---AAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * ** ** * * * *
5294340 AGA--AAAATGATTGGGATTAAACCATGAGTCAAAAAATGAATGCGATCGGGTTTAAATCACGAG
66 AAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
5294403 TCA-AGAAATG
129 TCAGA-AAATG
* * * * * * * * * * ***
5294413 AAAACGATAGCGATAAAATCATGAGTCAAAAAAATGAAAAATTATCGAAATTAAATCGTAAGTCA
1 AAAATGATCGAGATTAAACCATGAGTC-AGAAAATG-AAAATGATAGAGATTAAACCACGAGTC-
* * *** *** * ** *
5294478 AAAAAATGAAAATGACCGCGATTAAACCGTGAGTTGGAAGACCAAAACGAT-AGGGATTAAACCG
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCA-GGATTAAACCA
*
5294542 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
** * * * * * * *
5294556 AAAACAACCCAGATTAAACCATAAGTCAGAAAATGAAAACGACCAG-GATTAAACCACAAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * *
5294620 AAAATGAAAATGATTCA-GATTAAACTACCAA-TGAAAAAAAGAAAAATGAT-AGGGATTAAACC
65 AAAATGAAAATCA---AGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCA-GGATTAAACC
* *
5294682 ACGAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* ** * * * * *** * * * *
5294697 AAAATAATCCTGATTAAGCCTTGAGTCAAAAAATGAAAACGAGCCAAATTAAATCGCAAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * *
5294762 AAATGGAAACAACCAGGATTAAACCACCAGTCAAAAAAAGAAAAACGATCAGGATTAAACCATGG
66 AAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATGA
*
5294827 GTTAGAAAATG
128 GTCAGAAAATG
* * * * * *
5294838 AAAATAATCGAGATTAAACTATGAGTCAGAAAATGAAAATTACT-GATAATAAACCACGAGTCAT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * ** * * * * * ** * **
5294902 AAAATGAAAATGCGAGGAATTAGACCGCATCTTAGATAATGAAAACAACCAAAATTAAATCACAA
65 AAAATGAAAAT-CAAGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5294967 GTCAAAAAATG
128 GTCAGAAAATG
* * * * * * * * *
5294978 AAAA-CAACAAGGATTAAATCACGAATCAAAAAAATGAAAATGACTAG-GATTAAATCATGAGTC
1 AAAATGATCGA-GATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
** * * ** * * ** *
5295041 AGTGAAA--AAAAGCGATGGGAATTAAACCGTAAGTCAAAAAATGAAAATGACCAAAATTAAATC
63 A-AAAAATGAAAATC-A-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
* * **
5295104 GTGAGTTAGAAAACC
124 ATGAGTCAGAAAATG
** * * * * * ** *
5295119 AAAACAACCGAGATTAAACCACGAGCCAAAAAATGAAAATGATCAG-GATTAAATCGTGAGTAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCAA
* * * * * * * * * *
5295183 AAAATGAAAACCATCGAGATTACATCACAAGTCAAAAATTAAAAAC-AACCGTCATTAAATCATG
65 AAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
*
5295247 AGTTAGAGAAATG
127 AGTCAGA-AAATG
* * *
5295260 AAAATGATCGATATTAAATCACAT--GTCA-AAAATTGAAAACT-ACTCAGA-A-TAAATCATGA
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAA-TGAAAA-TGA-T-AGAGATTAAACCACGA
* * * * * * * * * * * * *
5295319 GTCAGAAAATCAAAACCACCGAAACTAAATCACATGTCAGAGAACGAAAAATGATC-GAAATTAA
60 GTCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAA
* * * *
5295383 ATCACGAGTTAAAAAATG
121 ACCATGAGTCAGAAAATG
* ** * * ** * * * *
5295401 AAAATGATCGGGATTAAACTGTTAGTCAAAAAATGAAAATGACCCG-TATTAAACTACGAGTTAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * *
5295465 AAAAT-AAAAACGATCGAGATTAAACCGCGAGTCAAAAAATGAAAATGATC-GAGATTAAACCAT
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
* *
5295528 GAGTGAAAAAATG
126 GAGTCAGAAAATG
* * * * ** * * * *** *
5295541 AAAACGATC-AGGATTAAACCACGAGTCAAAAAATGAATACAATCGGGATTAAATCGTAAGTTAA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * ** * * * *
5295605 GAAATGAAAA-CAATCGGGATTAAATCATGAGTCAAGAAATGATAACGA-CTGAGATTAAATCAT
65 AAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
* *
5295668 AAGTCA-AAAATAA
126 GAGTCAGAAAAT-G
* * * *
5295681 AAAATGATCGGGATTAAATCACT-AGTCAAAAAATGAAAACGATA-AGGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCA
* ** * * * * *
5295744 GAAAATGAAAATGACCGGGATTAAACCACTAGCCAGAAAAAAGGAAAATGA-CCGAGATTAAA-C
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTC--AAAAAATGAAAACGATCAG-GATTAAACC
* *
5295807 ATTGAGTTAGAAAACG
124 A-TGAGTCAGAAAATG
* * * ** * * * * ***
5295823 AAAACGATTGATATTAAACCACAAGTTAGAAAATGAAAACGAT-CA-A--AAA--ATGAAAAAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * ** * * * * *
5295882 AAATG---ATC-GGGACTAAACCACGAGTTAGAAAATGAATGCAACCA-GTTTGAATCATGAGTC
66 AAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGTC
5295942 A-AGAAATG
131 AGA-AAATG
* ** * * * ** *
5295950 AAAATGA-CTGGGATTAAAGTACGAGTTAAAAAATGAAAAACA-ACCTG-GATTGAACCACGAGT
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATA---GAGATTAAACCACGAGT
* * * ** * * *
5296012 CAGAAAA-CAAAAACAAGTGGGATTAAA-CATTGAGTCAAAAAAAGAAAATGACCTA-GATTAAA
62 CAAAAAATGAAAATCAA---GGATTAAACCA-CAAGTCAAAAAATGAAAACGATC-AGGATTAAA
* *
5296074 GCACGAG-CTAGAAAATG
122 CCATGAGTC-AGAAAATG
* * * * * * ** * *
5296091 GAAACGA-CTAAGACTAAACCATGAGTCAAAAAATGGAAATGACCGAGATTAAACCACCATTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA-
* *** ** * * * *
5296155 AAAAA-GAAAAATGAACAGGATTAAACCGTGAGTCAGGAAATGAAAATGA-CTGGAATTAAGCTA
64 AAAAATG-AAAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAACCA
* **
5296218 CGAGTTGGAAAATG
125 TGAGTCAGAAAATG
* * * * * * *
5296232 AGAACGAT--A-A--AAA--A--A-T-AGAAAA-GAAAAATGATTGGGATTAAACTATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * *
5296285 AAAATGAATGCGATC-GGGTTTAAATCACGAGTCAAGAAATGAAAACGATC-GTGATTAAAACAC
65 AAAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5296348 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* * * * * * ** * **
5296361 AAGAACGACCGACATTAAATCATAAGTCAAAAAAATGAAAATGACCGCGATTAAACCGTGAGTCA
1 AA-AATGATCGAGATTAAACCATGAGTC-AGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* ** *** * * *
5296426 AAAGATGAAAAGGATAGGGATTAAACCGTGAGTCAAAAAATGAAAACAACCCA-GATTAAACCAC
64 AAAAATGAAAATCA-A-GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCAT
* * *
5296490 AAGTCAAAAAATA
126 GAGTCAGAAAATG
* * * * ** * * * ** *
5296503 AAAACG-GCCAGGATTAAACGACAAGTCAGAAAATGAAAACGATTGGGATTAAAATACCA-TCAA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * ** * *
5296566 AAAAAGAAAAATGATAGGGATTAAACCACGAGTCAAAAAATGAAAAAGCACCACAATTAGACCAC
65 AAAATG-AAAATCA-A-GGATTAAACCACAAGTCAAAAAATGAAAACG-ATCAGGATTAAACCAT
*
5296631 GAGTCAAAAAATG
126 GAGTCAGAAAATG
* * * ** *** * *
5296644 AAAATGA-CTATGATTAAACCATGAGCCAAAAAATGAAAAAAAAATCCTGATTAAGCCATGAGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATG--AAAATGATAGAGATTAAACCACGAGTC
* * * * * *
5296708 AGAAAATGAAAA-CGAGCCGAATTAAACCGCAAGTCAAAAAATGGAAACAACCAGGATTAAACCA
63 AAAAAATGAAAATCAAG--G-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
** * *
5296772 CCAGTCAAAAAAAG
125 TGAGTCAGAAAATG
* * * * *
5296786 AAAAACGAT-TAGGATTAAACCATGGGTCAGAAAATGAAAATGATCA-AGATTAAACTATGAGTC
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTC
* * * * * *** * *
5296849 AGAAAATGAAAATGATTGAGAATAAACCACGAGTTTTAAAATGAAAATGCGA--GGGATTAGA--
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAA--CGATCAGGATTAAACC
* * *
5296910 TTGCGTCTTAGATAATG
124 ATGAGTC--AGAAAATG
** * * * * * * ** * * *
5296927 AAAACAACCAAAATTAAATCACGAGTCAAAAAATGAAAACAACA-AGGATTAAATCACGAATCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCA-
* * *** * ** * * *
5296991 AAAAATGAAAATGACCAGGATTAAATCGTGAGTTAGTAAATGAAAACAACCAGGATTAAACCACG
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
*
5297056 AGTCAAAAAATG
127 AGTCAGAAAATG
* ** * * * * ** * * * *
5297068 AATACAATCGAGTTTAAATCGTGAGTTA-AGAAATGAAAACAATCGGGATTAAATCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * *
5297132 GAAATGACAACGA-CTGAGG-TTAAATCATGAGTC-AGAAAT-AAAA--A--ATGATTAAA-CAG
65 AAAATGA-AA--ATC-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA-
* *
5297188 TGAGTCAAAAAAAG
125 TGAGTCAGAAAATG
* * ** ** ** * *
5297202 AAAACGATCGAGATTAAATCACAAGTCAGAAAATGAAAAACA-ACCGTCATTAAATCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTCA
* * * * * * * * * *
5297266 GAGAAATGAAAATGATCGATATTAAATCACATGTC-AAAAATCGAAAACTA-CTGAGAATAAATC
64 -AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAG-GATTAAACC
*
5297329 ATGAGTCAGAAAATC
124 ATGAGTCAGAAAATG
** * * * * * * *
5297344 AAAACCA-CAGAAACTAAATCACAT--GTTATAGAATGAAAAATGACT-GAAATTAAATCACGAG
1 AAAATGATC-GAGATTAAA-C-CATGAGTCAGAAAATG-AAAATGA-TAGAGATTAAACCACGAG
* * * * **** * * * * * *
5297405 TTAGAAAATGAAAATGACCGAGATTAAACTGTGAGTGAAAAAATGAAAATGACCCGTATTAAACT
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
* * *
5297470 ACGAGTTAGAAAATA
124 ATGAGTCAGAAAATG
* * * * * * *
5297485 AAAAAGATTCAAGATTAAA-CAGTGAGTCAAAAAATTAAAAACGCATCGAGATTAAACCATGAGG
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAA-TGAAAATG-ATAGAGATTAAACCACGA-G
* * * * * * *
5297549 TCAAAAAATGAAACGACCAA-GATTAAATCACCGATTCAAAAAATGAATACCAATCGGGATTAAA
61 TCAAAAAATGAAA--ATCAAGGATTAAACCA-CAAGTCAAAAAATGAA-AACGATCAGGATTAAA
* *
5297613 TCGC-CGAGTTA-AGAAATG
122 -C-CATGAGTCAGA-AAATG
** * * * * * *
5297631 AAAAACAATCAAG-TTAAATCATGAGTCAAAGAAAATGACAACGACTCGAGATTAAATCACGAAG
1 -AAAATGATCGAGATTAAACCATGAGTC--AGAAAATGAAAATGA-TAGAGATTAAACCACG-A-
* ** ** * * *
5297695 GCCAAAAATAAAAAAAATGACCCGGGA-TAACATCACTAGTC-AAAAATG-AAACGATAAGGGAT
60 GTC-AAAA-AATGAAAAT---CAAGGATTAA-ACCACAAGTCAAAAAATGAAAACGATCA-GGA-
*
5297757 TTAAACCACGAGTCAG-AAATG
117 TTAAACCATGAGTCAGAAAATG
* * * * * **
5297778 ATAGATGACCGAGATTAAAACCACT-AG-CTAGAAAAGGGAAAACGA-CGAAGATTAAA-CATTA
1 A-AAATGATCGAGATT-AAACCA-TGAGTC-AGAAAA-TGAAAATGATAG-AGATTAAACCA-CG
* * * * * * *
5297839 AGTCAGGAAAACGAAAA-CGATTGTATTTAAACCACGAGTCAGAAAATGAAAA--A-C--GATCC
59 AGTCA-AAAAATGAAAATC-A-AGGA-TTAAACCACAAGTCAAAAAATGAAAACGATCAGGAT-T
*
5297898 AAA--AT---T--GAAAA-A
119 AAACCATGAGTCAGAAAATG
* * * * * * * * *
5297910 AAAATGATCGCGGACTGAAACCACGAGTTAG-AAATG--AATGCA-ACCAGTTTGAA-TATGAGT
1 AAAATGATCG-AGA-TTAAACCATGAGTCAGAAAATGAAAATG-ATA-GAGATTAAACCACGAGT
* * * ** ** * * * *
5297970 CAAGAAATGAAAATGACTGCGATTAAAGTATGAGTTAAAAAATGAAAAACAACCTGGATTAAACC
62 CAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACC
*
5298035 ATGAGTCAGAAAACG
124 ATGAGTCAGAAAATG
* * * * *** * *
5298050 AGAACAAG-T-GGGATTAAACGATGAGTCAGAAAAAGAAAATGACCTAGATTAAAGCACGAG-CT
1 A-AA-ATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* ** * * * *
5298112 AGAAATGGAAACGA-CTAA-GATTAAACCATGAGTCAATAAAT-AGAAATGACCAAGATTAAACC
64 AAAAAT-GAAA--ATC-AAGGATTAAACCACAAGTCAAAAAATGA-AAACGATCAGGATTAAACC
** *
5298174 ACCAGTCAGAAAAAG
124 ATGAGTCAGAAAATG
* * * * * **
5298189 AAAAATGAAC-AGGATTAAACCGTGAGTCAGAAAATGAGAACGATA-A-A--AAA--ATGA-AAA
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
** * ** * ** * * *
5298246 AAAAATG---AT-TGGGTTTAAACCATGAGTCAGAAAATGAATGCGATCGGGTTTAAATCATGAG
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
5298307 TCA-AGAAATG
129 TCAGA-AAATG
* * * ** * * ** * * *
5298317 AAAACGATCGTGATTAAAACACAAGTCAAAAAATGAAGAACGACCGAGATTAAATCGCAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC-A
* * * *** * * * *
5298382 AAAAATGAAAATGACCGCAATTAAACCGTTAGTCGAAAGATGAAAACGA-CGGGGATTAAACCGT
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5298446 GAGTCAAAAAATG
126 GAGTCAGAAAATG
** * * * ** * ** * * *
5298459 AAAACAACCTAGGTTAAACCACAAGTTAGAAAATGAAAACCATTAG-GATTAAACTCCCCA-TGA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAAC-CACGAGTCA
* * * * * * *
5298522 AAAAAAGAAAAATGATAGGGATTAAACCACGAGTCAAAAAATGAAAAAGGACCATGATTAGACCA
64 AAAAATG-AAAATCA-A-GGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCA
* *
5298587 CGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * * *** * ** *
5298601 AAAATG-GCTATGATTAAACCATGAGTCAAAAAATGAAAATAATCTTGATTAAGCCGTGAGTCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* ** * * * * **
5298665 AAAATGAAAAT-GAGCTAGATTAAACCGTAAGTCAAAAAATGGAAACAACCAGGATTAAAGCACC
65 AAAATGAAAATCAAG---GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
* * *
5298729 AATCAAAAAAAG
127 AGTCAGAAAATG
* * * * * *
5298741 AAAAACGATC-AGGATTAAACCACGGGTCAAAAAATGAAAATGATCA-AGATTAAACTATGAGTC
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTC
* * * * * * *
5298804 AAAAAATGAAAATGACTGAGAATAAACCACGAGTC-ATAAATGAAAATGCGA--GGGATTAGACC
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAA--CGATCAGGATTAAACC
*
5298866 --GCA-TCTTAGATAATG
124 ATG-AGTC--AGAAAATG
** * * * * * * ** * * * *
5298881 AAAACAACCAAAATTAAATCACT-AGTCAAAAAATAAAAACAACA-AGGATTAAATCACAAATCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTC-
* ** *** * *
5298944 AAAAAATGAAAATGACCAA-GATTAAATCATGAGTCATGGAA-CAAAAGCGAT-GGGAATTAAAC
63 AAAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAA-CGATCAGG-ATTAAAC
* * *
5299006 CGTAAGTCAAAAAATG
123 CATGAGTCAGAAAATG
* * * * * ** ** **
5299022 AAAATGACCAAAATTAAATCGTGAGTCAGAAAACAAAAACAACCGAGATTAAACCACGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* *** * * **
5299087 AAA-GAAAATGATCAA-GATTAAATCGTGAGTCAAAAAATGAAAACAATC-GAGATTAAATCACA
66 AAATG-AAA--ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
5299149 AGTCAGAAAATG
127 AGTCAGAAAATG
** ** * * * **
5299161 AAAAACAATCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATCA-ATATTAAATCAAAATGT
1 -AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGAT-AGAGATTAAACCACGA-GT
* * * * * ** * * ** *
5299225 --AAAAATCAAAAACTACTGAGAATAAATCATGAGTCAGAAAATCG-AAACCATCAAAACTAAAT
62 CAAAAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAGGATTAAA-
* *
5299287 CACAT--GTCGGAGAATG
122 C-CATGAGTCAGAAAATG
* ** ** * * ** * * *
5299303 AAAAATG-TCCGAAATTAAGTCACAAGTTAAAAAATGAAAATGACCGGGATTAAA-C-TGAATCA
1 -AAAATGAT-CGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * * * * * * *
5299365 AAAAATGAAAATGACCCA-TATTAAACTACGAGTTAGAAAAT-AAAAAGA-CCGAGATTAAATCG
64 AAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
5299427 TGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * * * ** * * * * * *
5299441 AAAACGACCAAGATTAAACCACGAGTCAAAAAATGAATACAATCGAGTTTAAATCATGAGTTAAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* ** * * * * * **
5299506 AAATGAAAA-CAATCGGGATTAAATCATGAGTCAAGAAATGACAACAACTGAGG-TTAAATCACA
66 AAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCATG
*
5299569 AGTCA-AAAATAA
127 AGTCAGAAAAT-G
* ** * **
5299581 AAAATGATCGGGATTAAATTACT-AGTCAAAAAATGAAAACAATA-AGGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCA
* * *
5299644 AAAAATGAAAATGACCTA-GATTAAACCACTAGCCATAAAAA-GAAAAACGATC-GAGATTAAA-
64 AAAAATGAAAAT---CAAGGATTAAACCACAAGTCA-AAAAATG-AAAACGATCAG-GATTAAAC
**
5299705 CATTGAGTCAGAAAACA
123 CA-TGAGTCAGAAAATG
* * * ** * **
5299722 AAAATGATTGATATTAAACCACGAGTCAGAAAATGAAAATGAT--CCA--AAA--ATGA-AAAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
*** * * ** * * * * *
5299780 AAATG---ATC-ATTTTCTAAACCACAAGTTAGAAAATGAATGCAACCA-GTTTGAATCATGAGT
66 AAATGAAAATCAAGGAT-TAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
*
5299840 CAAAAAATG
130 CAGAAAATG
* * ** * * * ** *
5299849 AAAATGATTGGGATTAAAGTACGAGTTAAAAAATGAAAAACA-ACCTG-GATTAAACCATGAGTC
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA---GAGATTAAACCACGAGTC
* ** * * *
5299912 AAAAAACGAAAA-CAAGTGGGATTAAA-CATTGAGTTAGAAAAA-GAAAATGACCTA-GATTAAA
63 AAAAAATGAAAATCAA---GGATTAAACCA-CAAGTCA-AAAAATGAAAACGATC-AGGATTAAA
* * *
5299973 GCACGAGCCAGAAAATG
122 CCATGAGTCAGAAAATG
* * * * *
5299990 GAAATGA-CTAAGATTAAACCATAAGTCAGAAAAT-AGAAATGACT-GGGATTAAACCACCAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGA-AAATGA-TAGAGATTAAACCACGAGTC
* *** * * * *
5300052 AGAAAAA-GAAAAATGAACAGGATTAAACCGTGAGTCAGAAAATGAAAATGA-CTGGAATTAAGC
63 A-AAAAATG-AAAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAAC
* *
5300115 TATGAGTTAGAAAATG
123 CATGAGTCAGAAAATG
* * * * * * * *
5300131 ---A-GAAC-A-A-TAAA--A-AAAT--GAAAAAGAAAAATGATTGGGATTAAACCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5300184 AAAATGAATGTGATC-GGGTTTAAATCACGAGTCAAGAAATGAAAATGATC-GTGATTAAAACAC
65 AAAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
5300247 GAGTCA-AAAAGTG
126 GAGTCAGAAAA-TG
* * * ** * ** * **
5300260 AAGAACGATCGAGATTAAATCGCA--AGTGAAAAAACAAAAATTACCGCGATTAAACCGTGAGTC
1 AA-AATGATCGAGATTAAA-C-CATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC
* * * ** * *** * * *
5300323 GAAAGATGAAAAGGACGGGGATTAAATCGTGAGTCAAAAAATGAAAACAACCTA-AATTAAACCA
63 AAAAAATGAAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
*
5300387 TAAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * ** ** * * * *
5300401 AAAACGA-CCAGGATTAAACCACCAGTCAGAAAATGAAAACAATTGGGATTAAACTACCCA-TCA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCA-CGAGTCA
* * * * * *
5300464 AAAAAAGAAAAATGATAAGGATTAAACCACGAGTCAAAAAATGAAAAAAGATCACGATTAGACCA
64 AAAAATG-AAAAT--CAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCA
*
5300529 CGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * *** * *
5300543 AAAATGA-CTATGATTAAACCATGAGTCAAAAAATCAAAATAATCCTGATTAAGCCATGAGTCAA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* ** * * * **
5300607 AAAATGAAAAT-GAGCCAGATTAAACTGCAAGTCAAAAAATGGAAACAACCAGGATTAAACCACC
65 AAAATGAAAATCAAG---GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
*
5300671 AGTCAAAAAATG
127 AGTCAGAAAATG
** * * * * * * ** * * *
5300683 AAAACAACCAAAATTAAATCACGGGTCAGAAAATGAAAACAACA-AGGATTAAATCACGAATCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCA-
* * ** *** * * * *
5300747 AAAAATGAAAATGACCAGGATTAAATCATGAG-CTAGGGAA-CAAAAGTGAT-GGGAATTAAATC
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTC-AAAAAATGAAAA-CGATCAGG-ATTAAACC
* * *
5300809 GTAAGTCAAAAAATG
124 ATGAGTCAGAAAATG
* * * * * ** **
5300824 AAAATGACCAAAATTAAATCATAAGTCAGAAACA--AAAACAACCGAGATTAAACCACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAA-ATGAAAATGATAGAGATTAAACCACGAGTCAA
** * * * * *
5300887 AAAATGAAAATGATCAA-GATTAAACCATGAGTAAAAAAATGAGAACAATC-GAGATTAAATCAC
65 AAAATG-AAA--ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5300950 AAGTCA-AAAATTG
126 GAGTCAGAAAA-TG
** * * * * * * * *
5300963 AAAAACAACCATCACTAAATCATGAGTCAGAGAAATGAAAATGATCGATATTAAATCAC-ATGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGA-GTC
* * * ** * * * * * *
5301027 -AAAAATCGAAAA-CTACTGAGAATAAATCATGAGTCAAAAACTCAAAACCA-CCGAAACTAAAT
63 AAAAAAT-GAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAA-
* * *
5301089 CACAT--GTTAGAGAACG
122 C-CATGAGTCAGAAAATG
* * * * * * * * * * ****
5301105 AAAAATCAACGAAATTAAATCACGAGTTAAAAAATGAAAGTGATCGGGATTAAATTGTGAGTCAA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** * * * * * * * *
5301170 AAAATGAAAATGACCCGTATTAAACTACGAGTTAGAAAATAAAAAAGATC-GAGATTAAACCACG
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
*
5301234 AGTCAAAAAATG
127 AGTCAGAAAATG
* * *
5301246 AAAACT-ATCGAGATTAAACCATGAGTTAAAAAAATGAAAATGACCAG-GATTAAACCACGAGTC
1 AAAA-TGATCGAGATTAAACCATGAG-TCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * *** * * * * *
5301309 AAAAAATGAATACAATC-GGGTTTAAATCGTGAGTTAAGAAATGAAAACAATCGGGATTAAATCA
63 AAAAAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5301373 TGAGTCAGGAAATG
125 TGAGTCAGAAAATG
* * * * * * * * ** * *
5301387 ACAACGA-CTAAGATTAAATCACGAGTCA-AAAATAAAAAATGATCGGGATTAAATTACTAGTGA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGATAGAGATTAAACCACGAGTCA
* * * * *
5301450 AAAAATGAAAA-CAATAAGGATTAAACCACGAGTCAGAAATTGAAAATGA-CCGAGATTAAACCA
64 AAAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
* *
5301513 TTAG-CTAGAAAAAGG
125 TGAGTC-AG-AAAATG
* * * *
5301528 AAAACGATCGAGATTAAA-CATTGAGTCAGAAAATGAAAACGATTGTGATTAAACCACGAGTCAA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** ** * * * *
5301592 AAAATGAAAATGACTGGGATTAAAGTACGAGTTAAAAAATGAAAAAC-AACTTGGATTAAACCAT
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATC-AGGATTAAACCAT
*
5301656 GAGTCGGAAAATG
126 GAGTCAGAAAATG
** * * *** *
5301669 AAAACAAGT-GGGATTAAA-CATTGAGTCAGAAAAAGAAAATGACCTAGATTAAAGCACGAG-CA
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC-
** * * * * *
5301731 AAAAAATGGAAACGA-CTAA-GATTAAACCATGAGTCACAAAATGGAAATGACCGGGATTAAACC
63 AAAAAAT-GAAA--ATC-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
** *
5301794 ACCAGTCAGAAAAAG
124 ATGAGTCAGAAAATG
* * * ** * * *
5301809 AAAAATGAATAG-GATTAAACCGTGAGTCAGGAAATGAAAATGACCG-GAATTAAGCTACGAGTT
1 -AAAATG-ATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAG-ATTAAACCACGAGTC
* * * * **
5301872 AGAAAATGAGAAT----GA-TAAA--A-ATA-T-GAAAAA-GAAAAATGATTGGGATTAAACCAT
63 AAAAAATGAAAATCAAGGATTAAACCACA-AGTCAAAAAATG-AAAACGATCAGGATTAAACCAT
5301926 GAGTCAGAAAATG
126 GAGTCAGAAAATG
*** * * * * * * * * * *
5301939 AATGCGATCGGGTTTAAATCACGAGTCAAAAAATGAAAACGATCGTGATAAAAACACGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * ** * * *
5302004 AAATGAAGAATGACCGAGATTAAATCGTAAGTCAAAAAAATGAAAATGA-CCGCGATTAAACCGT
66 AAATGAA-AATCA-AG-GATTAAACCACAAGTC-AAAAAATGAAAACGATCAG-GATTAAACCAT
* *
5302068 GAGTTAGAAGATG
126 GAGTCAGAAAATG
* * * * ** *** ** *
5302081 AAAAGGA-CGGGGATTAAACCGTGAGTCAAAAAATGAAAACAACCCAGATTAAACCATAAGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * *
5302145 AAAATGAAAATGATTGGGATTAAACTACCCA-TCAAAAAAAGAAAAATGAT-AGGGATTCAACCA
65 AAAATGAAAATCA--AGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCA-GGATTAAACCA
* * *
5302208 CGAGTAAAAAAATG
125 TGAGTCAGAAAATG
* * * * * * *
5302222 AAAAAGGA-CCACGATTAAACCACGAGTCAAAAAATGAAAATGATTGTGATTAAACCATGAGTCA
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
**** * ** *
5302286 AAAAATGAAAATACTCCTAATTAAGCCATTAGTCAAAAAATGAAAACGAGCCA-GATTAAA-C-T
64 AAAAATGAAAAT-C-AAGGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCAT
*
5302348 GCAAGTCAAAAAATG
126 G--AGTCAGAAAATG
* * * * * * * * * * *
5302363 GAAA-CAACCAGGATTAAAGC---A--CCG-AAAT-TAAATCA-CGAG-TTAAA--A--AAT--G
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
*** **** * * * * *
5302412 AAAATG----TTTGGGATTAAACTGTGAGTCAAAAAAT-AAAATGACCCGTATTAAACTATGAGT
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
* *
5302472 TAGAAAATA
130 CAGAAAATG
* * * * ** * * *
5302481 AAAAAGATCGAGATTAAATCACGAGTCAG-AAATAAAAAATGACCGGGATTAAATCACTAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAAT-GAAAATGATAGAGATTAAACCACGAGTCAA
* ** * * ** *
5302545 AAAGTGAAAA-CGATAAGGATTAAACCATGAGTCAGAAAATGAAAATGGCCAAGATTAAACCACT
65 AAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA-T
*
5302609 -AGAT-AGAAAAAG
126 GAG-TCAGAAAATG
* * * *
5302621 AAAAATGATTGAGATTAAA-CATTGAGTCAGAAAACGAAAA-GCATTGGGATTAAACCACGAGTC
1 -AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATG-ATAGAGATTAAACCACGAGTC
* * * * * * *
5302684 AAAAAATGAAAA-C---GATCAAA--A-AA-T-GAACAA--AAAATGATCGGGACTAAACCACGA
63 AAAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5302738 GTTAGAAAATG
128 GTCAGAAAATG
**** * * * * * * ** * * *
5302749 -TTGCGA-CCAGTTTGAATCATGAGTCA-AGAAATCAAAATGACT-GGGATTAAAGTATGATTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * *
5302810 AAAAATGAAAAACAACCTCGATTAAACCACGAGTCAGAAAACGAAAA-GAAGT-GGGATTAAA-C
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACG-A-TCAGGATTAAACC
*
5302872 ATTGAGTCAGAAAA-A
124 A-TGAGTCAGAAAATG
* * * * * * * * * *
5302887 AAAATGACCTAGATTAAAGCACGAGCCAAAAAATGGAAACGACTA-AGATTAAACCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * *
5302951 AAAATGAAAATGATCGGGATTAAACCACTAGT-AGAAAAA-GAAAAATGAACAGGATTAAACCAT
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCA-AAAAATG-AAAACGATCAGGATTAAACCAT
*
5303014 GAGTCAGGAAATG
126 GAGTCAGAAAATG
* * * * * * *
5303027 AAAATGACTGGA-ATTAAGCTACGAATTAGAAAATGAAAATGATA-A-A--AAA--ATGA---AA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * ** * *
5303082 AAGA--AAAATGATTGGGATTAAACCATGAGTCAGAAAATGAATGCGATC-GAGTTTAAATCATG
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
*
5303144 AGTCAAAAAATG
127 AGTCAGAAAATG
* * * ** * * ** * ** * * * * *
5303156 AAAACGATCGTGATAAAAAAATGAGTAAAAAAAAAAAGAACGACCGAAACTAAATCGCAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC-A
* * * *** * * * **
5303221 AAAAATGAAAATGACCATGATTAAATCGTGAGTCAGAAGATGAAAACGA-CGGGGATTAAACTGT
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5303285 GAGTCAGAAAATA
126 GAGTCAGAAAATG
** * * * * * * * *
5303298 AAAACAACCCAGATTAAACCATAAGTCAAAAAATGAAAACGATTGGGATTAAACTACGCA-TCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACG-AGTCAA
* * * * * * * ** *
5303362 AAAAAGAAAAATGATAAGGATAAAACCATC-GGTAAAAAAATGAAAAAGCACCACAATTAGACCA
65 AAAATG-AAAAT--CAAGGATTAAACCA-CAAGTCAAAAAATGAAAACG-ATCAGGATTAAACCA
* *
5303426 CGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * ** * * *
5303440 AAAATGA-CTGTGATTAAACCATGAGTCA-AAAA--ATAATCCT---GATTAAGCCATGAGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * **
5303498 AAAATGAAAA-CGAGCCAGATTAAACCGCAAGTCAAAAAATGGAAACAACCAGGATTAAAGCACC
65 AAAATGAAAATCAAG---GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
* *
5303562 AGTCAAAAAAAG
127 AGTCAGAAAATG
* * * * **
5303574 AAAAACGATC-AGGATTAAACCATGGGTCAGAAAATGAAAATGATCGAGATTAAACTATTAGTCA
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * * * * *
5303638 GAAAATGAAAATGACTGAGAATAAACCACGAGTCATAAAATGAAAATGCGA--GGGATTAGACCA
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAA--CGATCAGGATTAAACCA
* ** * *
5303701 CGTCTTAGATAATG
125 TGAGTCAGAAAATG
** * * * * * * ** * * *
5303715 AAAACCACCAAAATTAAATCACGAGTCAAAAAATGAAAACAATAGGGATTAAATCACGAATCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC-AA
* * ** *** * * * *
5303780 AAAATGAAAATGACCAGGATTAAAACATGAGTCAGGGAA-CAAAAGCGAT-GGGAATTAAATCGT
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAA-CGATCAGG-ATTAAACCAT
* *
5303843 AAGTCAAAAAATG
126 GAGTCAGAAAATG
* * * * * ** ** *
5303856 AAAATGACCAAAATTAAATCATGAGTCAGAAAATAAAAACAACCGAGATTAAATCACGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* *** * * **
5303921 AAATGAAAATGATCAGGATTAAACCGTGAGTCAAAAAATGAAAACGATCAAGATTAAATCACAAG
66 AAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
*
5303986 TCAAAAAATG
129 TCAGAAAATG
* * ** * * * * *
5303996 AAAAAGAACCGTCATTAAATCATGAGTCAGAGAAATTAAAATGATCGATATTAAATCAC-ATGTC
1 AAAATG-ATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGA-GTC
* * * *** * * ** * * * *
5304060 ACAAATTAAAAACTTTTGAGAATAAATCATGAGTCAGAAAATCG-AAACCATC-GAAACTAAATC
63 AAAAAATGAAAA-TCAAG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAG-GATTAAA-C
* *
5304123 ACAT--GTCAGAGAACG
123 -CATGAGTCAGAAAATG
* * ** * * * ** *** *
5304138 AAAAATGATCGAAATTAAATCGCGAGTTAAAAAATAAAAATGACCGAGATTAAACTGTGAGTGAA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** * * * * * * * * *
5304203 AAAATGAAAATGACCCGTATTAAACTACGAGTTAGAAAATAAAAAAGA-CTGAGATTAAACCGTG
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
5304267 AGTCAGAAAATG
127 AGTCAGAAAATG
* * * * *
5304279 AAAACGATCGAGATTAAATCATGAGTTAAAAAATGAAAACGACTAG-GATTAAACCACGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5304343 AAAATGAATACAATC-GGGTTTAAATCACGAGTTAAGAAATGAAGACAATC-GAGATTAAATCAT
65 AAAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5304406 GAGTCAGGAAATG
126 GAGTCAGAAAATG
* * * * * ** * * *
5304419 ACAACGA-CTGAGATTAAATCACGAGTCAG-AAATAAAAAATGACCGGGATTAAATCACTAGTCA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGATAGAGATTAAACCACGAGTCA
* ** * *
5304482 AAAAATGAAAA-CGATAAGGATTTAACCAGGAGTCAAAAAATGAAAATGA-CCGAGATTAAACCA
64 AAAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
*
5304545 CT-AG-CTAGAAAAAGG
125 -TGAGTC-AG-AAAATG
* * * * * * *
5304560 AAAACGATTGAGATTAAA-CATTGAGTCAGAAAACGAAAATGATTGGGATTAAACCACGAGTTAG
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
** * *
5304624 AAAATGAAAAT----GATGGAA--A-AA-T--GAAAATG--ACCG---A-GATTAAACCACT-AG
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA-TGAG
* *
5304672 CCAGAAAAAGG
129 TCAG-AAAATG
* * * * *
5304683 AAAATGACCGAGATTAAA-CATTGAGTCAGAAAACGAAAACGATTGATATTAAACCACGAGTCAA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * *
5304747 AAATTGAAAA-C---GATCAAA--A-AA-TGAAAAAA--AAAATGATCGGGACTAAACCACGAGT
65 AAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
*
5304802 TAGAAAATG
130 CAGAAAATG
*** * * * * ** * *
5304811 AATGCGA-CCA-ATTTGAATCATGAGTCACG-AAATGAAAATGACT-GGGATTAAAGTACAAGTT
1 AAAATGATCGAGA-TTAAACCATGAGTCA-GAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * ** *
5304872 AAAAAATGAAAAACAACCTGGATTAAAACCACAAGTCATAAAACAAAAACAAGT--GCGATTAAA
63 AAAAAATGAAAATCAA---GGATT-AAACCACAAGTCAAAAAATGAAAACGA-TCAG-GATTAAA
* *
5304935 -CATTGAGTTAGAAAAAG
122 CCA-TGAGTCAGAAAATG
* * * * * * ** *
5304952 AAAATGATCTAGATTAAAGCACGAGCCAGAAAATGGAAATGACTA-AGATTAAATCGTGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * ** ** * * *
5305016 TAAATGGAAATGACTGGGATTAAACCACCTGTCAGAAAAA-GAAAAATGAACAAGATTAAACCAT
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCA-AAAAATG-AAAACGATCAGGATTAAACCAT
*
5305080 GAGTCAGGAAATG
126 GAGTCAGAAAATG
* * * * * * *
5305093 AAAATGATTGAAATTAAGCAACGAGTTAGAAAAT-AAGAATGATA-A-A--AAA--ATGA---AA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTCAA
* * * ** * ** * * * *
5305148 AAGA--AAAATGATTGGGATTAAACCATGAGTCAGAAAATGAATGCGATCGGGTTTAAATCACGA
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5305211 GTCA-AGAAATG
128 GTCAGA-AAATG
* * * * * ** *** *
5305222 AAAACGATCGTGATTAAAACATGAGTCAAAAAATGAAAAACGACCGAGATTAAACCGTAAGTAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGT-CA
* *** ** * * *
5305287 AAAAACT-AAAATCATCACGATTAAACCGTGAGTCGGAAGATGAAAACGA-CGGGGATTAAACCG
64 AAAAA-TGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
* *
5305350 TGAGTTAAAAAATG
125 TGAGTCAGAAAATG
* * * ** * * *
5305364 AAAA-CAACTTAGATTAAACCACAAGTCAGAAAATGAAAACGATCAG-GATTAAACCACAAGTTA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCA
* * ** * * * * *
5305427 GAAAATGAAAA-CGATTGGGATTAAAATACCCA-TCAAAAAAAATAAAAATGATAAGGATGAAAC
64 AAAAATGAAAATC-A--AGGATTAAACCA-CAAGTC--AAAAAATGAAAACGATCAGGATTAAAC
* *
5305490 CACGAGTCAAAAAATG
123 CATGAGTCAGAAAATG
* * * * * *
5305506 AAAAAAGA-CCACGATTAGACCACGAGTCAAAAAATGAAAATGACTA-TGATTAAACCACGAGTC
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * ** * *
5305569 AAAAAATAAAAAT-AATCTTGATTAAGCCATGAGTCAGAAAATGAAAACG-TGCCA-GATTAACC
63 AAAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGAT--CAGGATTAAAC
***
5305631 CGCAAGTCA-AAAATTG
123 CATGAGTCAGAAAA-TG
* * * * ** * * * * *
5305647 GAAA-CAACCAGGATTAAACCACCAGTCAAAAAAAGAAAAGCGATCAG-GATTAAACAATG-GTT
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAA-TGAT-AGAGATTAAACCACGAG-T
* * * * * ** * * * * *
5305709 CAGAAAATGAAAATGATTGAGACTAAACTATGAGTCAGAAAATAAAAATGA-CTGAGAATAAACC
62 CAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
*
5305773 -TCGAGTCATAAAATG
124 AT-GAGTCAGAAAATG
* * * ** * * *
5305788 AAAATG--CGAGGGATTAGACC--GCGTCTTAGATAATGAAAACAACCA-AAATTAAATCACGAG
1 AAAATGATCGA--GATTAAACCATGAGTC--AGAAAATGAAAATGA-TAGAGATTAAACCACGAG
* * * * * *
5305848 TCAAAAAATGAAAACAACAAGGATTAAATCACGAA-TAAAAAAAATGAAAATGACCAGGATTTAA
61 TCAAAAAATG-AAA-ATCAAGGATTAAACCAC-AAGT-CAAAAAATGAAAACGATCAGGATTAAA
* * *
5305912 TCATGAGTCAGAGAA-C
122 CCATGAGTCAGAAAATG
* * * * * * * * * * **
5305928 AAAAGCGAT-GGGAATTAAATCGTAAGTCAAAAAATAAAAATGACCA-AAATTAAATCGTGAGTC
1 AAAA-TGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * ** *
5305991 AGAAAAT-AAAAACAACCGAGATTAAACCACGAGTCAAAAAATGAAAATAATCAGGATCAAAACC
63 AAAAAATGAAAATCAA--G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGAT-TAAACC
* * *
5306055 GTGAGTTAAAAAATG
124 ATGAGTCAGAAAATG
* * * ** * ** ** * *
5306070 AAAACGATCAAGATTAAATCACAAGTCAAAAAATGAAAAACA-ACCGTCATTAAATCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTCA
* * * * * * * * *
5306134 AAGAAATGAAAATGATCTA-TATTAAATCACATGTCAAAAATTGAAAACTA-CTGAGAATAAATC
64 AA-AAATG-AAA--ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
*
5306197 ATGAGTCAGAAAATC
124 ATGAGTCAGAAAATG
** * * * * * * * * *
5306212 AAAACCATCAAAACTAAATCACAT--GTCAGAGAATTAGAAATGATCGAAATTAAATCACGAGTT
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATGA-AAATGATAGAGATTAAACCACGAGTC
** **** * * * * * *
5306275 AAAAAATGAAAATGACCGGGATTAAACTGTGAGTCAAAAAATGAAAATGACCCGTATTAAACTAC
63 AAAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* *
5306340 GAGTAAGAAAATA
126 GAGTCAGAAAATG
* ** * ** * * *
5306353 AAAAAGA-CTGAGATTAAACCGCGAGTCAGAAAATGAAAACGACCGAGATTAAATCATGAGTTAA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * ** * * **
5306417 AACAT-AAAAACGACTAAGATTAAACCACGAGTCAAAAAATGAATACAATTGGGTTTAAATCGCG
65 AAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
* *
5306481 AGTTA-AGAATTG
127 AGTCAGA-AAATG
** * ** * * * *
5306493 AAAACAAT-TAGGATTAAATAATGAGTCA-AGAAATGACAACGACT-GAGATTAAATCACAAGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * * * *
5306555 -AAAAATAAAAAATGATCGGGATTAAATCACTAGTCAAAAAATGAAAACGATAAGGATTAAACCA
63 AAAAAAT-GAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
5306619 TGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * *
5306633 AAAATGACCGAGATTAAACTACT-AGCCAGAAAAAGGAAAACGATCGAGATTAAACATTGGGATT
1 AAAATGATCGAGATTAAACCA-TGAGTCAG-AAAATG-AAA--AT---GA-T----A--GAGATT
* * * *
5306697 AAACCACGAGTCAAAAAATGAAAA-C---GATCAAA--A-AA-TGAAAAAA--AAATC-ATCGGG
51 AAACCACGAGTCAAAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG
* * *
5306751 ACTAAAGCACT-AGTTAGAAAATG
116 ATTAAACCA-TGAGTCAGAAAATG
** * * * ** * * ** * *
5306774 AATGTGA-CCAGTTTGAATGATGAGTCA-AGAAATAAAAATGACT-GGGATTAAAGTACGAATTA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * *
5306836 AAAAATGAAAAACAACTTGGATTAAACCACGAGTCAAAAAACGAAAACAAGT-GGGATTAAA-CA
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
* *
5306899 TTGAGTTAGAAAAAG
125 -TGAGTCAGAAAATG
* * * * * * * * *
5306914 AAAATGACCTAGATTAAAGCACGAGCCAAAAAATGGAAACGAATA-AGATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATG-ATAGAGATTAAACCACGAGTCAA
* * * * *
5306978 AAAATGAAAATGATCGGGATTAAACCACCAGTCAGAAAAA-GACAAATGAAT-AGGATTAAACCG
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCA-AAAAATGA-AAACG-ATCAGGATTAAACCA
* *
5307041 TGAGTCAGGAAATA
125 TGAGTCAGAAAATG
* * * * * * * *
5307055 AAAATGACTGGA-ATTAAGCTACGAGTTAGAAAATGAGAACGATA-A-A--AAA--ATGA---AA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * ** * ** * * * *
5307110 AAGA--AAAATGATTGGGATTAAACCATGAGTCAGAAAATGAATGCGAGCGGGTTTAAATCATGA
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
* *
5307173 ATTA-AGAAATG
128 GTCAGA-AAATG
* * * * * * *** *
5307184 AAAATGATCGTGATTAAAACACGAGTCAAAAAATGAAGA-GCAATCGAGATTAAACCGTAAGTTA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATG--ATAGAGATTAAACCACGAG-TC
* * *** * * * *
5307248 AAAAAAT-AAAAACGACGGGGATTAAACCGTGAGTCGAAAGATGAAAACGA-CGGGGATTAAATC
63 AAAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACC
* *
5307311 GTGAGTCAAAAAATG
124 ATGAGTCAGAAAATG
** * * ** * ** * * * *
5307326 AAAACAACCCAGATTAAACCACAAGCCAGAAAATGAAAACAATTGGGATTAAACTACCCA-TCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCA-CGAGTCAA
* * * * * * * * *
5307390 AAAAAGAAAAATGATAGGGATTAAATCACGAGTCAAAAAATGAAAAAGGACCACGATTAGACCAC
65 AAAATG-AAAATCA-A-GGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCAT
* *
5307455 GAGTTAAAAAATG
126 GAGTCAGAAAATG
* * * * *** * * * *
5307468 AAAATGA-CTATGATTAATCCATGAGTCAAAAAATGAAAATAATCCTGATTAAGCCATGAGTTAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * **
5307532 AAAATGAAAA-CGAGCCAGATTAAACCACAAGTAAAAAAATGGAAACAACCAGGATTAAACCACC
65 AAAATGAAAATCAAG---GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5307596 AGT-A-AAAA--
127 AGTCAGAAAATG
* * * * * * *
5307604 AAAATGATCAAGATTAAACCATGGGTCAAAAAATGAAAATGATCGAGATTAAACTATGAGTCAGA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * *
5307669 AAATGAAAATGACTAA-GAATAAACCACAAGTCATAAAATGAAAATGCGA--GGGATTAGACC--
66 AAATGAAAAT--C-AAGGATTAAACCACAAGTCAAAAAATGAAAA--CGATCAGGATTAAACCAT
* *
5307729 GCGTCTTAGATAATG
126 GAGTC--AGAAAATG
** * * * * * ** * * *
5307744 AAAACAACCAAAATTAAATCACGAGTCAGAAAATGAAAACAACA-AGGATTAAATCACGAATCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCA-
* * * *** * * *
5307808 AAAAATGAAAATGACCAGGATTAAATCATAAGTCAGGGAA-CAAAAGCGAT-GGGAATTAAACCG
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAA-CGATCAGG-ATTAAACCA
* *
5307871 TAAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * * * ** ** ** *
5307885 AAAATGACCAAAATTAAATCGTGAGTCAGAAAACAAAAACAACCGAGATTAAAACACGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* **** * * * **
5307950 AAA--AATGATC-AGGATTAAACTGTGAGTCAAAAAATGAAAACAATCAAGATTAAATCACAAGT
66 AAATGAA-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGT
5308012 CAGAAAATG
130 CAGAAAATG
** * ** * * * * **
5308021 AAAAACAACCGTTATTAAATCATGAGTTAGAGAAATGAAAATGATCGACATTAAACCACTTGTC-
1 -AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * ** * * * * * *
5308085 AAAAATCGAAAA-CTACTGAGAATAAATCATGAGTCAGAAAATCAAAACCA-CCGAAACTAAATC
64 AAAAAT-GAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAA-C
*
5308148 ACAT--GTCAGAGAATG
123 -CATGAGTCAGAAAATG
* * * * * * * ***
5308163 AAAAATGATCGAAACTTAAATCACGAGTTAAAAAATGAAAATGATCGGGATTAAACTGTGAGTCA
1 -AAAATGATCGAGA-TTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * * * * * *
5308228 AAAAATGAAAATGACCCA-TATTAAACTACGAGTTAGAAAATAAAAAAGA-CCGAGATTAAACCA
64 AAAAATGAAAAT---CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
*
5308291 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * * * ** * * * * * *
5308305 AAAACGA-CCAGGATTAAACCACGAGTCCA-AATATGAATACAATCGGGTTTAAATCGCGAGTTA
1 AAAATGATCGA-GATTAAACCATGAGT-CAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * ** * * * *
5308368 AGAAATGAAAA-CAATTGGGATTAAATCATGAGTCAAGAAATGACAACGA-CTGAGATTAAATCA
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
* *
5308431 CGAGTCAG-AAATAA
125 TGAGTCAGAAAAT-G
* * * * * * *
5308445 AAAATGACCAAGATTAAATCACT-AGTCAAAAAATGAAAACGATAAAGATTAAACCACGAGTCAG
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * *
5308509 AAAATGAAAATGACCGAGATTAAACCACTAG-CTAGAAAAAGGAAAACGATCAAGATTAAA-AAT
65 AAAATGAAAATCA-AG-GATTAAACCACAAGTC-A-AAAAATGAAAACGATCAGGATTAAACCA-
5308572 TGAGTCAGAAAACGAATACG
125 TGAGTCAG--AA--AAT--G
* * * * * * **
5308592 AAAATGATTTG-GATTAAACCACGAGTCAAAAAATGAAAAACGAT--CGA--AAA--ATGA-AAA
1 AAAATGA-TCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA
* * * * * * ** * * * *
5308649 AAAAATG---AT-TAGGACTAAACTACGAGTTAGAAAATGAATGCGACCA-GTTTGAATCATGAG
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
5308709 TCATG-AAATG
129 TCA-GAAAATG
* ** * * * *
5308719 AAAATGA-CTGGGATTAAAGTACT-AGTTAAAAAATGAAAAATAACCT-G-GATTAAACCACAAG
1 AAAATGATC-GAGATTAAACCA-TGAGTCAGAAAATG-AAAATGA--TAGAGATTAAACCACGAG
* * ** * *
5308780 TCAGAAAA-CAAAATCAAGTGCGATTAAA-CATTGAGTCAGAAAAA-GAAAATGACCTA-GATTA
61 TCAAAAAATGAAAATCAA--G-GATTAAACCA-CAAGTCA-AAAAATGAAAACGATC-AGGATTA
* ** *
5308841 AAGCACAAGCCAGAAAATTG
120 AACCATGAGTCAGAAAA-TG
* * * ** * *
5308861 -AAACGA-CTAAGATTAAACCATGAGTCAAAAAATGAAAATGACCGAGATTAAACCCCCAGTCAA
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC-A
* * *** ** * * ** *
5308924 AAAAAAGAAAAATAAACAGGATTAAACCATGTGTCAGGAAATGAAAATGA-CTGGAATTAGGCTA
64 AAAAATG-AAAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAACCA
* *
5308988 CGAGTTAGAAAATG
125 TGAGTCAGAAAATG
* * * * * *
5309002 AGAACGAT--A-A--AAA--A--A-T--GAAAAAGAAAAATGATTGGGATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * *
5309055 AAAATGAATGCGATC-GGGTTTAAATCACGAGTCAAAAAATGAAAACGATC-GTGATTAAACCAT
65 AAAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5309118 AAGTCA-AAAA--
126 GAGTCAGAAAATG
* * * * * *** * * **
5309128 AAAATGACCGCGATTAAACCATGAGTCGGAAGATGAAAACGCCGGGGATTAAATCGTGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * **
5309193 AAATGGAAA-CAACCCAGATTAAACCACAAGTCAAAAAATGAAAAGGACCAGGATTAAACCACAA
66 AAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5309257 GTCAGAAAATG
128 GTCAGAAAATG
* * * * ** * *
5309268 AAAACGATTGGGATTAAACTACCCA-TCAAAAAATGAAAATGACTA-TGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* ** ** * * * *
5309331 AAAAATGAAAAT-AATCCTGATTAAGTCATGAGTCAGAAAATGCAAACAAGCCA-GATTAAACCA
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
* * *
5309394 TAAATCAAAAAATG
125 TGAGTCAGAAAATG
* * * * * * * *
5309408 GAAA-CAACCAGGATTAAACCACT-AGTCAAAAAAAGAAAAACGATCAG-GATTAAACCATG-GT
1 AAAATGATCGA-GATTAAACCA-TGAGTCAGAAAATG-AAAATGAT-AGAGATTAAACCACGAG-
* * * * ** * * * * *
5309469 TCAGAAAATGAAAATGATCGAGATTAAACTATGAGTTAGAAAATGAAAATGA-CTAAGAATAAAC
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAAC
*
5309533 CATGAGTCATAAAATG
123 CATGAGTCAGAAAATG
* * * ** * * * * ** * * * *
5309549 AAAATG--CGAGGCATTAGATCACGTCTTAGATACTAAAAACAACCA-AAATTAAATCATGAGTC
1 AAAATGATCGA-G-ATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * * *
5309611 AGAAAATGAAAACAACAAGGATTAAATCACGAA-TCAAAAAAATGAAAATGA-CGAGGATTAAAT
63 AAAAAATG-AAA-ATCAAGGATTAAACCAC-AAGTC-AAAAAATGAAAACGATC-AGGATTAAAC
** **
5309674 CATGAGTCAGGGAACA
123 CATGAGTCAGAAAATG
* * * * * * *
5309690 AAAACGAT-GGGAATTAAACCGTAAGTCAAAAAATGAAAATGA-CGAAAATTAAA-CACGAGTCA
1 AAAATGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGATAG-AGATTAAACCACGAGTCA
** * * * * * *
5309752 AAAAGCAAAAACAACCAA-GATTAAACCACGAGCCAAAAAATCAAAATGATCAAGATTAAACCAT
64 AAAA--ATGAA-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* *
5309816 GAATCAAAAAATG
126 GAGTCAGAAAATG
* * ** ** * ** * *
5309829 AAAACGATCGAGATTAAATCACAAGTCAGAAAATGAAAAACA-ACATTCG-TTAAAAGATGAGTT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGA---GATTAAACCACGAGTC
* * * * * * * * * * *
5309892 AGAGAAATGAAAATGATCGATATTAAATCACATGTCAAAAATTGAAAACTAATGA-GAATAAAAC
63 A-AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAAC-GATCAGGATTAAACC
5309956 ATGAGTCAGAAAATCG
124 ATGAGTCAGAAAAT-G
** * * * * * * ** * * * *
5309972 -AAACCACCGAAACTAAATCACT-TGTCAGAGAACA-AAAAATGACCGAAATTAAATCAGGAGTT
1 AAAATGATCGAGATTAAACCA-TGAGTCAGA-AA-ATGAAAATGATAGAGATTAAACCACGAGTC
* * ** * *
5310034 AAAAAATGGAAATGATCGA-GATTAAACTATGAGTCAAAAAAATGAAAATGACTC-GTATTAAAC
63 AAAAAAT-GAAA--ATCAAGGATTAAACCACAAGTC-AAAAAATGAAAACGA-TCAGGATTAAAC
* * * *
5310097 TACGAGTTAGAAAATA
123 CATGAGTCAGAAAATG
* ** * * **
5310113 AAAAAGATCGAGATTAAACCGCGAGTCAGAAAATGAAAACG-TCCGAGATTAAACCATAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTC-A
* * * * * * *
5310177 AAAAATGAAAA-CGATCAGGATTAAACCACGAGTCAAAAAATGAATACAATCGGGTTTAAATCAC
64 AAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5310241 GAGTTA-AGAAATG
126 GAGTCAGA-AAATG
** * * * * **
5310254 AAAAAAATC-AGGATTAAATCATGAGTCA-AGAAATGACAACGACT-GAGATGAAATTACGAGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTC
** * * * * *
5310316 AGAAATAA--AAAATGACCGGGATTAAATCACTAGTCAAAAATTAAAAACGATAAGGATTAAACC
63 A-AAA-AATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
* * *
5310379 ACGACTCCAAAAAATG
124 ATGAGT-CAGAAAATG
* * *
5310395 AAAATGA-CAGAGATTGAACCACT-AG-CTAGAAAAAGAAAATGACT-GAGATTAAA-CATTGAG
1 AAAATGATC-GAGATTAAACCA-TGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCA-CGAG
* * * *
5310455 TCAAAAAATGAAAATGATTGGGATTAAACCACGAGTCAGAAAATG-AAACGATCA--A--AAA--
61 TCAAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
5310513 ATGA---A-AAAA--
124 ATGAGTCAGAAAATG
* * * * * ** * * * *
5310522 AAAATGATTGGGACTAAACCACGAGTTAGAAAATG--AATGCGACCA-ATTTGAATCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA-GAGA-TTAAACCACGAGTCA
* ** ** * * * * *
5310584 AGAAATGAAAATGACTGGGATTAAAGAACGAGTTAAAAAGTGAAAAACAACCTA-GATTAAACCA
64 AAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATC-AGGATTAAACCA
* *
5310648 CGAGTCAGAAAACG
125 TGAGTCAGAAAATG
** * * * * *** * *
5310662 AAAACAAGT-GGGATTAGA-CATTGAGTTAGAAAAAGAAAATGACCTAGATTAAAGCACGAGCCA
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * ** * * *
5310725 GAAAATGAAAA-CGACTAAGATTAAACCATGAGTCAAAAAATGAAAATGATCGGGATTAAACCAC
64 AAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* * *
5310789 CAGTCAAAAAAAG
126 GAGTCAGAAAATG
* * ** * * * * *
5310802 AAAAATGAACAAGATTAAACTGTGAGTCAGGAAATGAAAATGATTG-GAATTAAGCTACGAGTTA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAG-ATTAAACCACGAGTCA
* * * * * ** *
5310866 GAAAATG---AT-AACGA-TAAA--A-AAAT-GAAAAA-GAAAAATGATTGGGATTAAACAATGA
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATGA
5310921 GTCAGAAAATG
128 GTCAGAAAATG
*** * * * * * * * * *
5310932 AATGCGATCGGGTTTAAATCACGAGTCA-AGAAATGAAAACGATCGTGATTAAAACAGGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * *
5310996 AAAATGAAGAA-CGATCGACATTAAATCGCAAGTCAAAAAAATGAAAATGATCACGATTAAATCG
65 AAAATGAA-AATC-A-AG-GATTAAACCACAAGTC-AAAAAATGAAAACGATCAGGATTAAACCA
5311060 TGAGTC-GAAAGATG
125 TGAGTCAGAAA-ATG
* * * * ** *** * *
5311074 AAAACGA-CGGGGATTAAAACATGAGTCAAAAAATGAAAACAACCCAGATTAAACCACAAGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * ** * * **
5311138 AAAATGAAAAAGACCAGGATTAAACCACAAGTCAGGAAATGAAAAAGACCAGGATTAAACCACAA
65 AAAATG-AAAA-TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5311203 GTCAGGAAATG
128 GTCAGAAAATG
* * ** ** * * * *
5311214 AAAACGA-CTGGGATTAAAATACCAATCAAAAAAAGAAAAAAGATA-AGGATTAAACCACGAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGA-GATTAAACCACGAGTC
* * * * * * ** **
5311277 AAAAAATTAAAAAGGACCACGATTAGACCACGAGTCAAAAAATGAAAATAATCCTGATTAAACCA
63 AAAAAA-TGAAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
5311342 TGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * ** * * *
5311356 AAAATGAGCCAGATTAAATCGCA--AGTCAAAAAATGGAAACAACCAG-GATTAAACCACCAGTA
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
** *** * * *
5311418 AAAAAAAAAAACGATC-AGGATTAAACCATGGGTCAGAAAATGAAAATGATC-GAGATTAAACTA
63 AAAAAATGAAA--ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCA
*
5311481 TGAGTGAGAAAATG
125 TGAGTCAGAAAATG
* * * * * *
5311495 AAAATGA-CTGAGAATAAACCACGAGTCATAAAATGAAAATGCA-AGGGATTAGA-C-CGTGTCT
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATG-ATAGAGATTAAACCACGAGTC-
* * * * *** * * * *
5311556 TAGATAATGAAAA-CAACTAAGATTAAAGCATGTGCCAGAAAATGGAAACGA-CTAAGATTAAAC
63 -AAAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAAC
*
5311619 CATGAGTCAGAAAAAG
123 CATGAGTCAGAAAATG
* * * * * * * *
5311635 AAAAATGAAC-AGGATTAAACCATGAATCAGGAAATGAAAATGATTG-GAATTAAGCTACTAGTT
1 -AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAG-ATTAAACCACGAGTC
* * * * * *
5311698 AGAAAATGAGAAT----GA-TAAA--A-AAAT-GAAAAA-GAAAAATGAT-TGAGATTAAACCAT
63 AAAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAACCAT
*
5311752 GAGTCAAAAAATG
126 GAGTCAGAAAATG
*** * * * * * *
5311765 AATGCGAGCGAGTTTAAATCATGAGTCA-AGAAATGAAAACGATCGTGATTTAAA-CACGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGA-TTAAACCACGAGTCA
* ** * *
5311828 AAAAATGAAGAA-CGACCGAGATTAAACTGCAAGTCAAAAAAATGAAAATGA-CCGCGATTAAAC
64 AAAAATGAA-AATC-A-AG-GATTAAACCACAAGTC-AAAAAATGAAAACGATCAG-GATTAAAC
* *
5311891 CGTGAGTCAGAAGATG
123 CATGAGTCAGAAAATG
* * * * ** *** * *
5311907 AAAACGATGGTGATTAAACCATGAGTCAAAAAATGAAAACAACCCAGATTAAACCACAAGTCAGA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* ** * **
5311972 AAATGAAAA-CGACTAGGATTAAACCACAAGTCAGAAAATGAAAACGATTGGGATTAAACTACCC
66 AAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA-TG
* *
5312036 A-TCAAAAAAAG
127 AGTCAGAAAATG
* * * * * * *
5312047 CAAAATGATAGGGATTAAACCA-GAGTCAAAAAATAAAAATGACTA-TGATTATACCATGAGTCA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* ** ** * *
5312110 AAAAATGAAAAT-AATCCTGATTATGCCATGAGTCAAAAAATGAAAACGAGCCA-GATTAAACTA
64 AAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACCA
*
5312173 CT-AGTCAAAAAATG
125 -TGAGTCAGAAAATG
* * * * ** * * * *
5312187 GAAA-CAACCAGGATTAAACCACCATTCCA-AAAAAGAAAAATGATCA-TGATTAAACCA-TAGG
1 AAAATGATCGA-GATTAAACCATGAGT-CAGAAAATG-AAAATGAT-AGAGATTAAACCACGA-G
* * * * * * * * * * * *
5312248 TTAGAAAATGAAAATGATCGAGATTAAACTATACGTCAGAAAATGAAAATGA-CTGAGAATAAAT
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAAC
* * * *
5312312 CACGACTCATAAAATC
123 CATGAGTCAGAAAATG
* * * ** * * * *
5312328 AAAATG--CGAGCGATTAGACC--GCGTCTTAGATAATGAAAACAACCA-AAATTAAATCATGAG
1 AAAATGATCGA--GATTAAACCATGAGTC--AGAAAATGAAAATGA-TAGAGATTAAACCACGAG
* * * * *
5312388 TTAGAAAATGAAAA-CAACTAGGATTAAATCACGAA-TCAGAAAAATGAAAATGACCAGGATTAA
61 TCAAAAAATGAAAATC-A--AGGATTAAACCAC-AAGTCA-AAAAATGAAAACGATCAGGATTAA
* ** *
5312451 ATCATGAGTCAGGGAA-C
121 ACCATGAGTCAGAAAATG
* * * ** * * * * * * **
5312468 AAAAGCGATAG-GAATTATACTGTAAGTCAAAAAATGAAAATGACCA-AAATAAAATCGTGAGTC
1 AAAA-TGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * * * *
5312531 AGAAAAT-AAAAACAATCGAGATTAAACCACGAGTCAAAAAATGAAAATGATTAGGATTAAACCG
63 AAAAAATGAAAATCAA--G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
* *
5312595 TGAGTGAAAAAATG
125 TGAGTCAGAAAATG
* * * ** * ** ** * * * *
5312609 AAAACGATCGAGAATAAATCACAAGTCAAAAAATGAAAAACA-ACCGTCATTAAATCATGCGCCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGTCA
* * * * * * * * * *
5312673 GAAAAATGAAAATGATCGATATTAAATCACATGTC-AAAAATAAAAAACTA-CTGAGAATAAATC
64 -AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAG-GATTAAACC
* *
5312736 ATGAGTCAAAAAATC
124 ATGAGTCAGAAAATG
** * * * * * * * * *
5312751 AAAACCA-CTGAAACTAAATCAT-ATGTCAGAGAACGAAAAATGATCGAAATTAAATCACGAGTG
1 AAAATGATC-GAGATTAAACCATGA-GTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTC
* **** * * * * *
5312814 AAAAAATGAAAATGATCAGGATTAAACTGTGAGTCAAAAAATGAAAATGACCTGTATTAAACTAT
63 AAAAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
* *
5312879 GAGTTAGAAAATA
126 GAGTCAGAAAATG
* * * * * ** ***
5312892 AAAAAGACCGAGATTAAACTACGAGTCAGAAAATGAAAACGACCGAGATTAAACCTTAAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * **
5312957 AAATGAAAA-CGACTAGGATTAAACCGCGAGTCAAAAAATGAATACAATCAGGTTTAAATCGCGA
66 AAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
*
5313021 GTTA-AGAAATG
128 GTCAGA-AAATG
** * * * * * * *
5313032 AAAACAATCGGGATTAAATCATCAGTCA-AGAAATGACAACGACT-GAGATTAAATCATGAGTC-
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * *
5313094 AAAAATAAAAAATGATCGGGATTAAATCACTAGTCAAAAAATGAAAACGATAAGGATTAAACCAT
64 AAAAAT-GAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
5313159 GAGTCAGAAAATG
126 GAGTCAGAAAATG
* * * *
5313172 AAAATGATCGAGATTAAACCACT-AG-CTAGAAAAAGAAAAACGATCA-AGTTTAAA-CATTGAG
1 AAAATGATCGAGATTAAACCA-TGAGTC-AGAAAATG-AAAATGAT-AGAGATTAAACCA-CGAG
* ** *
5313233 TCAGAAAATGAAAAT-AATCGGGATTAAACCATGAGTCAGAAAATGAAAACGATC--G---AAA-
61 TCAAAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAAC
*
5313291 -A--A-T--G-AAATA
123 CATGAGTCAGAAAATG
* * * * ** * * * ** *
5313300 AAAATGATCGGGACTAAACCACGAGTTAGAAAATG--AATGCGACCAGTTTGAATGATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATA-GAGATTAAACCACGAGTCAA
* * ** ** ** * * * * *
5313363 GAAATAAAAATGACTGGGATTAAAGTATGAGTTAAAAAATGAAAAACAACCTGGATTAAACCACG
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCATG
*
5313428 AGTCAAAAAATG
127 AGTCAGAAAATG
** * * * *** * *
5313440 AAAACAAGT-GGGATTAAA-CATTGAGTTAGAAAAAGAAAATGACCTAGATTAAAGCACGAGCCA
1 AAAATGA-TCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * ** * * * * * *
5313503 GAAAATAGAAACGA-CTAA-TATTAAACCATGAGTTAGAAAATGGAAATGACCAAGATTAAACCA
64 AAAAAT-GAAA--ATC-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
** * *
5313566 CCAGTTAGAAAAAG
125 TGAGTCAGAAAATG
* * * * * *
5313580 ACAAATGAATAG-GATTAAACCGTGAGTCAGAAAATGAAAATGACTGGA-ATTAAGCTACGAGTT
1 A-AAATG-ATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * * **
5313643 AGAAAAT-AAGAA-C---GA-TAAA--A-AAAT-GAAAAA--AAAATGATTGGGATTAAACCATG
63 AAAAAATGAA-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
5313696 AGTCAGAAAATG
127 AGTCAGAAAATG
* * ** * * * *
5313708 AAAACGATCGATATTAAATCACAT--GTCA-AAAAT-AAAAAAATACTCAGAATAAATCATGAGT
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATGAAAATGATA--GAGATTAAACCACGAGT
* * * * * * * * * * * * * ** *
5313769 CAAAAAATCAAAACCACCGAAACTAAATCACATGTTAGAGAACGAAAAATGACCAAAATTAAATC
62 CAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACC
** * *
5313834 ACAAGTTAAAAAATG
124 ATGAGTCAGAAAATG
** * ** * * *
5313849 AAAATGATCGAGATTAAACTGTGAGTCAAAAAATGAAAATGACCCG-TATTAAACTACGAGTTAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* ** * * ** **
5313913 AAAATAAAAAAGACTGATATTAAACCATGAGTCAAAAAATGAAAACGATC-GAGATTAAACTTTG
65 AAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
*
5313977 AGTCAAAAAATG
127 AGTCAGAAAATG
* * * * * * ** * * * * ** *
5313989 AAAACGA-CCATGATTAAACAACGAGTCAAAAAATGAATACAATCGGGTTTAAATCGTGAGTTAA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * ** * * * * *
5314053 GAAATGAAAA-CAATCGGGATTAAATCATGAGTCAAGAAATGACAACGA-CTGAGATTAAATCAC
65 AAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCAT
*
5314116 GAGTCA-AAAATAA
126 GAGTCAGAAAAT-G
* * * * *
5314129 AAAATGACCGGGATTAAATCACT-AGTCAAAAAATGAAAACGATA-AGGATTAAACCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTCA
* * * * *
5314192 AAAAATGAAAATGACCGAGATTAAACCACTAG-CTAGAAAAAGGAAAACAATC-GAGATTAAA-C
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTC-A-AAAAATGAAAACGATCAG-GATTAAACC
*
5314254 ATTGAGTCCGAAAATG
124 A-TGAGTCAGAAAATG
* * * * * * * ** *
5314270 AAAACGATTGGGATTAAACCACGAGTCAGTAAATGAAAACGATCGA-A--AAATGA--AAT--AA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * ** * * * **
5314328 AAATG---AT-TAGGACTAAACCACGAGTTAGAAAATGAATGCGACCA-GTTTGAATGATGAGTC
66 AAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGTC
*
5314388 A-AGAAATA
131 AGA-AAATG
* ** * * * **
5314396 AAAATGA-CTGGGATTAAAGTACGAGTTAAAAAATGAAAAACA-ACCTG-GATTAAACCACGAGT
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATA---GAGATTAAACCACGAGT
* ** * * *
5314458 CAGAAAATGAAAA-CAAGTGGGATTAAA-CATTGAGTTAGAAAAA--AAAATGACCTA-GATTAA
62 CAAAAAATGAAAATCAA---GGATTAAACCA-CAAGTCA-AAAAATGAAAACGATC-AGGATTAA
* * * *
5314518 AGCACGAGCCAAAAAATG
121 ACCATGAGTCAGAAAATG
* * * * ** * *
5314536 GAAACGA-CTAAGATTAAACCATGAGTCAGAAAATGGAAATGACCGGGATTAAACCACCAGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA-
* * *** ** * ** * * *
5314600 AAAAA-GACAAATGAATAGGATTAAATCGTGAGTCAGGAAATGGAAATTA-CTGGAATTAAGCTA
64 AAAAATGA-AAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAACCA
* * *
5314663 CGAGTTACAAAATG
125 TGAGTCAGAAAATG
* * * *
5314677 AGAACGAT--A-A--AAA--A--A-T--GAAAAAGAAAAATGATTAG-GATTAAACCATGAGTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGA-TAGAGATTAAACCACGAGTCA
* * * * ** * * *
5314729 GAAAATG--AATGCGAGCGGGTTTAAA-TATTGAGTCAAGAAATGAAAATGATC-GTGATTAAAA
64 AAAAATGAAAAT-C-A--AGGATTAAACCA-CAAGTCAAAAAATGAAAACGATCAG-GATTAAAC
* *
5314790 CACGAGTCAAAAAATG
123 CATGAGTCAGAAAATG
* * * * * ** * * *
5314806 AAAAACGATCGAGATTAAACCATAAGTTAAAAAAATAAAAATGACGGGGATTAAACCATGAGTCG
1 -AAAATGATCGAGATTAAACCATGAG-TCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * *** * *
5314871 AAAGATGAAAA-CGACGGGGATTAAATCGTGAGTCAAAAAATGAAAAC-AACACAGATTAAACCA
64 AAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCA-GGATTAAACCA
** *
5314934 CAAGTCAAAAAATG
125 TGAGTCAGAAAATG
** * * * ** * * * *
5314948 AAAACAATTGGGATTAAACTACCCA-TCAAAAAAAGAAAAATGATAGGGATTAAATCACGAGTCA
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCA
* * * * * * * *
5315012 AAAAATGAAAAAGGACCACGATTAGACCACAAGTTAAAAAATGAAAATGA-CTATGATTAATCCA
64 AAAAATG-AAAA--TCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCA
*
5315076 TGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* ** * * * *** * *
5315090 AAAATAATCCTGATTAAGCCATGAGTTAGAAAATGAAAACGAGCCAGATTAAACCACAAGTAAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * *
5315155 AAATGGAAACAACCAGGATTAAACCACCAGT--AAAAA--AAAATGATCAAGATTAAACCATGGG
66 AAAT-GAAA-ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
*
5315216 TCAAAAAATG
129 TCAGAAAATG
* * * * *
5315226 AAAATGATCGAGATTAAACTATGAGTTAGAAAATGAAAATGACTA-AGAATAAACCACAAGTCAT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * * ** * *
5315290 AAAATGAAAATGCGAGGGATTAGACCGC--GTCTTAGATAATGAAAACAACCAAAATTAAATCAC
65 AAAATGAAAAT-C-AAGGATTAAACCACAAGTC--AAAAAATGAAAACGATCAGGATTAAACCAT
5315353 GAGTCAGAAAATG
126 GAGTCAGAAAATG
* * * * * * * * *
5315366 AAAA-CAACAAGGATTAAATCACGAATCAGAAAAATGAAAATGACCAG-GATTAAATCATGAGTC
1 AAAATGATCGA-GATTAAACCATGAGTCAG-AAAATGAAAATGA-TAGAGATTAAACCACGAGTC
*** * * * * ** * * ** * *
5315429 AGGGAA-CAAAAGTGATGGGAATTAAATCGTAAGTCAAAAAATGAAAATGACCAAAATTAAATCG
63 AAAAAATGAAAA-TCA-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
**
5315493 TGAGTCAGAAAACA
125 TGAGTCAGAAAATG
* * * * *** *
5315507 AAAATAACCGAGATTAAAGCACGAGTC--AAAA--AAAATGATCAG-GATTAAACTGTG-GTAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCAA
* * * * * * *
5315566 AAAATGAAAACGATCAA-GATTAAATCACAAGTCAGAAATTGAAAAAC-AACCGTTATTAAATCA
65 AAAATG-AAA--ATCAAGGATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAACCA
*
5315629 TGAGTCGGAGAAATG
125 TGAGTCAGA-AAATG
* * * * * *
5315644 AAAATGATCGACATTAAACCACT-TGTCA-AAAATTGAAAACT-ATTGAGAATAAATCATGAGTC
1 AAAATGATCGAGATTAAACCA-TGAGTCAGAAAA-TGAAAA-TGATAGAGATTAAACCACGAGTC
* * * * * * * * * * * * *
5315706 AGAAAATCAAAACCACCGAAACTAAATCACATGTCAGAGAATGAAAAATGATC-GAAACTTAAAT
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GA-TTAAAC
* * *
5315770 CACGAGTTAAAAAATG
123 CATGAGTCAGAAAATG
* * ** * *** * * * *
5315786 AAAACGATCGGGATTAAACTGTGAGTCA-AAAATAAAAATGAGCCATATTAAACTACGAGTTAGA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* ** * ** * *
5315850 AAATAAAAAAGACCGAGATTAAACCA-TGGTCAAAAAATGAAAACGACCAGGATTAAACCACGAG
66 AAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
*
5315914 TCTA-AATATG
129 TC-AGAAAATG
* ** * * * * ** * * * *
5315924 AATACAATCGGGTTTAAATCATGAGTTA-AGAAATGAAAACAATTGGGATTAAATCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * *
5315988 GAAATGACAA-CAACTGAGATTAAATCACGAGTCAGAAATAA--AAAATGACCAAGATTAAATCA
65 AAAATGAAAATCAA--G-GATTAAACCACAAGTCA-AAA-AATGAAAACGATCAGGATTAAACCA
*
5316050 CT-AGTCAAAAAATG
125 -TGAGTCAGAAAATG
* ** * * ** *
5316064 AAAACGATAAAGATTAAACCACGAGTCAAAAAATGAAAATGACCGAGATTAAACCACTAG-CTAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC-A-
* * * ** * * **
5316128 AAAAAGGAAAA-CGATCGAGATTAAA-AATTGAGTCAGAAAACGAAAACGATTTGGATTAAACCA
64 AAAAATGAAAATC-A-AG-GATTAAACCA-CAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
** *
5316191 CAAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * *
5316205 AAAAATGATC-A-A--AAA--AT--G--A-AAAA--AAAATGATTAG-GACTAAACCACAAGTTA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * ** ** * * **
5316256 GAAAATG--AATGCGACCA-GTTTGAATCATGAGTCATGAAATGAAAATGA-CTGGGATTAAAGT
64 AAAAATGAAAAT-C-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACC
* * *
5316317 ACGAGTTAAAAAATG
124 ATGAGTCAGAAAATG
* * * * ** * *
5316332 AAAAATAACCTG-GATTAAACCACGAGTCAAAAAATGAAAACAAGT-GCGATTAAA-CATTGAGT
1 -AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCA-CGAGT
* * * * *
5316394 CAGAAAAA--AAAATGACCTA-GATTAAAGCACAAGCCAGAAAATTG-AAACGA-CTAAGATTAA
62 CA-AAAAATGAAAAT---CAAGGATTAAACCACAAGTCA-AAAAATGAAAACGATC-AGGATTAA
*
5316454 ACCATGAGTCAAAAAATG
121 ACCATGAGTCAGAAAATG
* * * *** * * *
5316472 GAAATGACCGAGAGTAAACCCCCAGTCAGAAAAAAGAAAAATGA-ACAAGATTAAACCATGAGTC
1 AAAATGATCGAGATTAAACCATGAGTCAG-AAAATG-AAAATGATA-GAGATTAAACCACGAGTC
** * * ** * * * * *
5316536 AGGAAATGAAAATGACTGGAATTAGGCTACGAGTTAGAAAATGAGAACGAT-A--A--AAA--A-
63 AAAAAATGAAAATCA-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCAT
*
5316593 -A-T--GAAAAAG
126 GAGTCAGAAAATG
* * * *** * * *
5316602 AAAAATGATTGGGATTAAACCATGAGTCAAAAAATGAATGCGATCTG-GTTTAAATCACGAGTCA
1 -AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGAT-AGAGATTAAACCACGAGTCA
* * * * * *
5316666 AGAAATGAAAA-CGATCGTGATTAAAACACGAGTCAAAAAATGAAGAATGA-CTGAGATTAAACC
64 AAAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAA-AACGATCAG-GATTAAACC
* *
5316729 A-GAAGTCAAAAAAAAG
124 ATG-AGTC-AGAAAATG
* * * * * ** * * **
5316745 AAAATGATCGTGATTAAACCTTGAGTCGGAAGATGAAAACGACGGGGATTAAATCGTGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * ** * **
5316810 AAATAAAAATGACGCAGATTAAACCACAAGTCAGAAAATGAAAACGATTGGGATTAAACTACCCA
66 AAATGAAAATCAAG--GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA-TGA
*
5316875 -TCAAAAAATG
128 GTCAGAAAATG
* ** * * *** ** **
5316885 AAAATGA-CTATGATTAAACCACAAGTCAAAAAATGAAAATAATCCTGATTAAGTCTTGAGTCAA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * *
5316949 AAAATGAAAA-CAAGCCAGATTAAACCACAAATCAAAAAATGGAAACAACCAGGATTAAACCACT
65 AAAATGAAAATCAAG---GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA-T
* *
5317013 -AGTCAAAAAAAG
126 GAGTCAGAAAATG
* * * *
5317025 AAAAACGATC-AGGATTAAACCATG-GTTCAGAAAATGAAAATGATCGAGATTAAACTACGAGTT
1 -AAAATGATCGA-GATTAAACCATGAG-TCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC
* * * * ** * * * * *
5317088 AGAAAATGAAAATGACTCA-GAATAAACTATGACTCATAAAATGAAAATG--CGAGGCATTAGAT
63 AAAAAATGAAAAT--C-AAGGATTAAACCACAAGTCAAAAAATGAAAACGATC-AGG-ATTAAAC
* * *
5317150 C--GCGTCTTAGATAATA
123 CATGAGTC--AGAAAATG
** * * * * * ** * * *
5317166 AAAACAACCAAAATTAAATCACGAGTC-GAAAAATGAAAACAACA-AGGATTAAATCACGAATCA
1 AAAATGATCGAGATTAAACCATGAGTCAG-AAAATGAAAATGATAGA-GATTAAACCACGAGTC-
* * ** *** * * * *
5317229 AAAAAATGAAAATGACGAGGATTAAATCATGAGTCAGGGAA-CAAAAGCGAT-GGGAATAAACCG
63 AAAAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAA-CGATCAGGATTAAACCA
* * *
5317292 TAAGTTAAAAAATG
125 TGAGTCAGAAAATG
* * * ** * *
5317306 AAAATGA-CAAAAATTAAA-CACGAGTCA-AAAA-GCAAAAACA-ACCAAGATTAAACCACGAGC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATG-AAAATGATA--GAGATTAAACCACGAGT
** *
5317366 CAAAAAATGAAAATGATCAA-GATTAAACCATGAGTCAAAAAATGAAAACGATC-GAGATTAAAT
62 CAAAAAATG-AAA--ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAAC
**
5317429 CACAAGTCAGAAAATG
123 CATGAGTCAGAAAATG
** * * ** * * * *
5317445 AAAAACAACCGTCG-TTAAAAGATGAGTTAGAGAAATGAAAATGATCGATATTAAATCAC-ATGT
1 -AAAATGATCG-AGATTAAACCATGAGTCAGA-AAATGAAAATGATAGAGATTAAACCACGA-GT
* * ** * * * * * *
5317508 C-AAAAATCGAAAA-CTAATGAGAATAAAACATGAGTCAGAAAATCAAAACCA-CCGAAACTAAA
62 CAAAAAAT-GAAAATC-AA-G-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAA
* * *
5317570 TCACT-TGTCAGAGAACA-A
122 CCA-TGAGTCAGA-AA-ATG
* * * * * * ** * ***
5317588 AAAATGATCAAAATTAAATCAGGAGTTAAAAAATGAAAATGACCGGGATTAAACTGTGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTC-AA
** * * * * * * * * **
5317653 AAAATGAAAATGACTCGTATTAAACTACGAGTTAGAAAATAAAAAAGA-CCGAGATTAAACCGCG
65 AAAATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
5317717 AGTCAGAAAATG
127 AGTCAGAAAATG
* * * *
5317729 AAAACG-TCCGAGATTAAACCATAAGTCAAAAAAAATGAAAACGATCAG-GATTAAACCACGAGT
1 AAAATGAT-CGAGATTAAACCATGAGTC--AGAAAATGAAAATGAT-AGAGATTAAACCACGAGT
* * * * * * * *
5317792 CAAAAAATGAATACAATC-GGGTTTAAATCACGAGTTAAGAAATGAAAACAATCAGGATTAAATC
62 CAAAAAATG-A-A-AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACC
*
5317856 ATGAGTCAGGAAATG
124 ATGAGTCAGAAAATG
* * * * * * * * *
5317871 ACAACGA-CTAAGATGAAATCACGAGTCAG-AAATAAAAAATGACTAG-GATTAAATCACTAGTC
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAAT-GAAAATGA-TAGAGATTAAACCACGAGTC
* * * * * * *
5317933 AAAAAAT-AAAAACGATAAGGATTAAACCACGACTTAGAAAATGAAAATGA-CAGAGATTGAACC
63 AAAAAATGAAAATC---AAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
*
5317996 ACT-AG-CTAGAAAAGG
124 A-TGAGTC-AGAAAATG
* * * *
5318011 AAAATGA-CTGAGATTAAA-CATTGAGTCAGAAAATGAAAATAATTGGGATTAAACCACAAGTCA
1 AAAATGATC-GAGATTAAACCA-TGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA
* * * * * * *
5318074 GAAAATG-AAA-C---GATCAAA--A-AA-T-GAAAAA--AAAATGATCGGGACTAAACCACGAG
64 AAAAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAG
*
5318127 TTAGAAAATG
129 TCAGAAAATG
*** * * * * * ** * *
5318137 AATGCGA-CCA-ATTTGAATCATGAGTCA-AGAAAGGAAAATGACT-GGGATTAAAGTACGACTT
1 AAAATGATCGAGA-TTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * * * ** * *
5318198 AAAAAATGAAAAACAACCTAGATTAAACCACGAGTCAGAAAATGAAAAAAAGT-GGGATTAGA-C
63 AAAAAATGAAAATCAA---GGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAACC
* *
5318261 ATTGAGTTAGAAAAAG
124 A-TGAGTCAGAAAATG
* * * * * * *
5318277 AAAATGACCTAGATTAAAGCATGAGCCAAAAAATGAAAACGACTA-AGATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * *
5318341 AAAATGAAAATGATCGGGATTAAACCACCAGTCAGAAAAA-GAAAAATGAACAAGATTAAACCGT
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCA-AAAAATG-AAAACGATCAGGATTAAACCAT
*
5318405 GAGTCAGGAAATG
126 GAGTCAGAAAATG
* * * * * * * *
5318418 AAAATGATTG-GAATTAAGCTACGAGTTAGAAAATGAGAACGATA-A-A--AAA--ATGA---AA
1 AAAATGATCGAG-ATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * ** * ** * * * *
5318473 AAGA--AAAATGATTGGGATTAAACAATGAGTCAGAAAATGAATGCGATCCGGTTTAAATCACGA
65 AAAATGAAAATCA--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGA
5318536 GTCA-AGAAATG
128 GTCAGA-AAATG
* * * * * * * * * * *
5318547 AAAACGATCGTGATTAAAACACGAGTCAAAAAATGAAGAACGATCGACATTAAATCGCAAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAA-AATGATAGAGATTAAACCACGAGTC-A
* * * *** * * * * *
5318612 AAAAATGAAAATGACCGCGATTAAATCGTGAGACGAAAGATGAAAACGA-CGGGGATTAAACCGT
64 AAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAACCAT
*
5318676 GAGTCAAAAAATG
126 GAGTCAGAAAATG
** * * ** * * * *
5318689 AAAACAACCCAGATTAAACCACAAGTCAGAAAATGAAAAAGACTA-AGATTAAACTACAAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* ** * * * *
5318753 AAAATGAAAA-CGATTGGGATTAAAATACCAA-TAAAAAAAAGAAAAAAGATAAGGATTAAACCA
65 AAAATGAAAATC-A--AGGATTAAACCA-CAAGTCAAAAAATG-AAAACGATCAGGATTAAACCA
* *
5318816 TGAGTCAAAAAATTA
125 TGAGTCAGAAAA-TG
* * * * * * *** * * *
5318831 AAAAGGA-CCACGATTAGACCATGAGTCAAAAAATAAAAATAATCCTGATTAAGCCATGAGTCAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * **
5318895 AAAATGAAAA-CGAGCCAGATTAAACCACAAGTCAAAAAATGGAAACAACCAGGATTAAACCACC
65 AAAATGAAAATCAAG---GATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATG
*
5318959 AGTCA-AAAA-A
127 AGTCAGAAAATG
* * * * * * * *
5318969 AAAACGATC-AGGATTAAACCATGGGTCAAAAAATGAAAATGATCGAGATTAAACTATGAGTGAG
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * *
5319033 AAAATGAAAATGACTGAGAATAAACCACGAGTCATAAAATGAAAATGCGA--GGGATTAGACCGT
65 AAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAA--CGATCAGGATTAAACCAT
** * *
5319096 GTCTTAGATAATG
126 GAGTCAGAAAATG
* * * * * * * *
5319109 AAAA-CAACTAAGATTAAAGCATGTG-CTAGAAAATGGAAACGACTA-AGATTAAACCATGAGTC
1 AAAATGATC-GAGATTAAACCATGAGTC-AGAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
* * ** * * *
5319171 AGAAAAA-GAAAAATGAACAGGATTAAACCATGAA-TCAGGAAATGAAAATGAT-TGGAATTAAG
63 A-AAAAATG-AAAAT-CA-AGGATTAAACCA-CAAGTCAAAAAATGAAAACGATCAGG-ATTAAA
* * *
5319233 CTACGAGTTAGAAAATG
122 CCATGAGTCAGAAAATG
* * * *
5319250 AGAATGAT--A-A--AAA--A--A-T--GAAAAAGAAAAATGATTGAGATTAAACCATGAGTCAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * *
5319303 AAAATGAATGCGATCGA-GTTTAAATCACGAGTCAAGAAATGGAAACGATC-GTGATTTAAA-CA
65 AAAATGAA---AATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GA-TTAAACCA
* *
5319365 CGAGTCAAAAAATG
125 TGAGTCAGAAAATG
* * * ** * ***
5319379 AAGAACGATCGAGATTAAA--TTGCAAGTCAAAAAGATGAAAATGACCGCGATTAAACTGTGAGT
1 AA-AATGATCGAGATTAAACCATG--AGTCAGAAA-ATGAAAATGATAGAGATTAAACCACGAGT
* * * ** * *
5319442 CAGAAGATGAAAA-CGACGGTGATTAAACCATGAGTCAAAAAATGAAAACAACCCA-GATTAAAC
62 CAAAAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAAC
**
5319505 CACAAGTCAGAAAATG
123 CATGAGTCAGAAAATG
* ** * * * *
5319521 AAAACT-A-CTAGGATTAAACCACAAGTCAGAAAATGAAAATGATTGGGATTAAACTACCCA-TC
1 AAAA-TGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCA-CGAGTC
* * * * *
5319583 AAAACAA-GAAAAATGATAGGAATTAAACCACGAGTCAAAAAATAAAAATGA-CTATGATTAAAC
63 AAAA-AATG-AAAATCA-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATC-AGGATTAAAC
* *
5319646 CATGAGTCAAAAAAAG
123 CATGAGTCAGAAAATG
* ** * * *** * *
5319662 AAAATAATC-ATGATTATGCCATGAGTCAAAAAATGAAAACGAGCCAGATTAAACTACTAGTCAA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAA
* * * * * *
5319726 AAAATGGAAACAACCAGGATTAAACCACCATTCCAAAAAA-GAAAAATGATCATGATTAAACCAT
65 AAAAT-GAAA-ATCAAGGATTAAACCACAAGT-CAAAAAATG-AAAACGATCAGGATTAAACCAT
*
5319790 -AGGTTAGAAAATG
126 GA-GTCAGAAAATG
* * * * * *
5319803 AAAATGATCGAGATTAAACTATAAGTCAGAAAATGAAAATGACT-GAGAATAAATCACGACTCAT
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* * * * * * * * ** *
5319867 AAAATCAAAATGCGAGCGATTAGACCGC--GTCTTAGATAATGAAAACAACCAAAATTAAATCAT
65 AAAATGAAAAT-CAAG-GATTAAACCACAAGTC--AAAAAATGAAAACGATCAGGATTAAACCAT
5319930 GAGTCAGAAAATG
126 GAGTCAGAAAATG
* * * * * * * * * *
5319943 AAAA-CAACAAGGATTAAATCACGAATCATAAAAATGAAAATGACCAG-GATTAAATCATGAGTC
1 AAAATGATCGA-GATTAAACCATGAGTCA-GAAAATGAAAATGA-TAGAGATTAAACCACGAGTC
*** * *** * * ** * *
5320006 AGGGAAT-AAAAGCGATAGGAATTAAACTGTAAGTCAAAAAATGAAAATGACCAAAATTAAATCG
63 AAAAAATGAAAATC-A-AGG-ATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
* **
5320070 TGAGTTAGAAAACA
125 TGAGTCAGAAAATG
** * * * ** * *
5320084 AAAACAATCAAGATTAAACCACGAGTCAAAAAATGAAAATGATTAG-GATTAAACCGTGAATGAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* ** * * ** *
5320148 AAAATGAAAA-CGATCGAGATTAAATTACAAGTCAAAAAATGAAAAACAACCATCATTAAATCAT
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAGGATTAAACCAT
*
5320212 GAGCCAGAGAAATG
126 GAGTCAGA-AAATG
* * * * *
5320226 AAAATGATCGATATTAAATCACAT--GTCA-AAAAT-AAAA-AACTACTGAGAATAAATCATGAG
1 AAAATGATCGAGATTAAA-C-CATGAGTCAGAAAATGAAAATGA-TA--GAGATTAAACCACGAG
* * * * * * * * * * * * *
5320286 TCAAAAAATCAAAACCACCGAAACTAAATCACATGTTAGAGAATGAAAAATGA-CCGAAATTAAA
61 TCAAAAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATG-AAAACGATCAG-GATTAAA
* * * * *
5320350 TCACGAATTAAAAAATG
122 CCATGAGTCAGAAAATG
* ** * ** * * * *
5320367 AAAATGATCGGGATTAAACTGTGAGTCAAAAAATGAAAATGACCCG-TATTAAACTACGAGTTAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCAA
* ** * ** * * * *
5320431 AAAATAAAAAAGACCGAGATTAAACTGCGAGTCAGAAAATGAAAATGATC-GAGATTAAACCTTG
65 AAAATGAAAATCA-AG-GATTAAACCACAAGTCAAAAAATGAAAACGATCAG-GATTAAACCATG
*
5320495 AGTCAAAAAATG
127 AGTCAGAAAATG
* * * * * ** * * * *
5320507 AAAACGA-CTAGGATTAAACCACGAGTCAAAAAATGAATACAATTAG-GTTTAAATCGCGAGTTA
1 AAAATGATCGA-GATTAAACCATGAGTCAGAAAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * * * *
5320570 AGAAATGAAAA-CAATCGGGATTAAATCATCAA-TCAAGAAATGACAACGA-CTGAGATTAAATC
64 AAAAATGAAAATCAA---GGATTAAACCA-CAAGTCAAAAAATGAAAACGATCAG-GATTAAACC
* *
5320632 ACGAGTCA-AAAATAA
124 ATGAGTCAGAAAAT-G
* * * *
5320647 AAAATGATC-AGGATTAAATCACT-AGTCAAAAAATGAAAACGATA-AGGATTAAACCACAAGTC
1 AAAATGATCGA-GATTAAACCA-TGAGTCAGAAAATGAAAATGATAGA-GATTAAACCACGAGTC
* * * * * *
5320709 AGAAAATGAAAATGACCGAGATTAAACCACTAG-CTAGAAAAA--AAAATGATC-GAGTTTAAA-
63 AAAAAATGAAAATCA-AG-GATTAAACCACAAGTC-A-AAAAATGAAAACGATCAG-GATTAAAC
*
5320769 CATTGAGTCAGAAAAGG
123 CA-TGAGTCAGAAAATG
** * * * * * ** *
5320786 AAAACAATTGGGATTAAACCACGAGTCAGAAAATGAAAACGATCGA-A--AAATGA--AAT--AA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * ** * * * **
5320844 AAATG---ATC-AGAACTAAAGCACGAGTTAGAAAATGAATGCGACCA-GTTTGAATGATGAGTC
66 AAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGTC
*
5320904 A-AGAAATA
131 AGA-AAATG
** * * **
5320912 AAAATGA-CTG-GATTAAAGTATGAGTTAAAAAATGAAAAACA-ACCTG-GATTAAACCACGAGT
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATA---GAGATTAAACCACGAGT
* * ** * *
5320973 CAGAAAACGAAAA-CAAGTGGGATTAAA-CATTGAGTCAGAAAAA-GAAAATGACCTA-GATTAA
62 CAAAAAATGAAAATCAA---GGATTAAACCA-CAAGTCA-AAAAATGAAAACGATC-AGGATTAA
* * *
5321034 AGCACGAGCCAGAAAATG
121 ACCATGAGTCAGAAAATG
* * * * * * * *
5321052 GAAACGA-CTAAGATTAAACCATGAGTTAGAAAATGGAAATGATCGGGATTAAACCACCAGTCAG
1 AAAATGATC-GAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCA-
* *** * * * *
5321116 AAAAA-GACAAATGAATAGGATTAAACCGTGAGTC-AGAAATGAAAATGA-CTGGAATTAAACTA
64 AAAAATGA-AAAT-CA-AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAACCA
* *
5321178 CGAGTTAGAAAATG
125 TGAGTCAGAAAATG
* * * * * *
5321192 AGAATGAT--A-A--AAA--A--A-T--GAAAAAGAAAAATGATTGGGATTAAACCATGAGTCAG
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGTCAA
* * * * * * * * *
5321245 AAAATGAAAA-CGATCGATATTAAATCACATGTC-AAAAATACAAAACTA-CTGAGAATAAATCA
65 AAAATGAAAATC-A-AG-GATTAAACCACAAGTCAAAAAAT-GAAAACGATCAG-GATTAAACCA
* * *
5321307 TGAGCCAAAAAATC
125 TGAGTCAGAAAATG
* * * * * * * * * *
5321321 AAAACCG-CCGAAACTAAATCACAT--GTTAGAGAACGAAAAATGATCGAAATTAAATCACGAGT
1 AAAA-TGATCGAGATTAAA-C-CATGAGTCAGAAAATG-AAAATGATAGAGATTAAACCACGAGT
* **** * * *
5321383 TAAAAAATGAAAATGATCAA-GATTAAACTGTGAGTCAAAAAATGAAAATGACCCA-TATTAAAC
62 CAAAAAATG-AAA--ATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGA-TCAGGATTAAAC
* * * *
5321446 TACGAGTTAGAAAATA
123 CATGAGTCAGAAAATG
* * * * * * * **
5321462 AAAAAGACCGATATTAAACCACGAGTCAAAAAATGAAAACGATCGAGATTAAACCTTGAGTCAAA
1 AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
* * * * * * *
5321527 AAATGAAAA-CGACCATGATTAAACCACGAGTCAAAAAATGAATACAATC-GGTTTTAAATCGTG
66 AAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGG-ATTAAACCATG
*
5321590 AGTTA-AGAAATG
127 AGTCAGA-AAATG
** * * * * * *
5321602 AAAACAATCGGGATTAAATCATGAGTCA-AGAAATGACAACGACT-GAGATTAAATCACGATTCA
1 AAAATGATCGAGATTAAACCATGAGTCAGA-AAATGAAAATGA-TAGAGATTAAACCACGAGTCA
* * * *
5321665 GAAATAA--AAAATGACAAGGATTAAATCACTAGTCAAAAAATGAAAACGATAAAGATTAAACCA
64 -AAA-AATGAAAAT--CAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCA
*
5321728 CGAGTCAGAAAATG
125 TGAGTCAGAAAATG
* * * * * * *
5321742 AAAATGACCGAGATTAAACCACT-AG-CTAAAAAAGGAAAACGATTGAGATTAAA-AATTGAGTC
1 AAAATGATCGAGATTAAACCA-TGAGTC-AGAAAATGAAAATGATAGAGATTAAACCA-CGAGTC
* * *
5321804 AAAAAATGAAAA-CGATTTGGATTAAACCACGAGTCAAAATATGAA
63 AAAAAATGAAAATC-A--AGGATTAAACCACAAGTCAAAAAATGAA
5321849 TAGAGATCGA
Statistics
Matches: 42554, Mismatches: 11736, Indels: 9126
0.67 0.19 0.14
Matches are distributed among these distances:
110 4 0.00
112 5 0.00
114 1 0.00
115 60 0.00
116 28 0.00
117 14 0.00
118 36 0.00
119 28 0.00
120 11 0.00
121 30 0.00
122 48 0.00
123 140 0.00
124 84 0.00
125 339 0.01
126 793 0.02
127 858 0.02
128 723 0.02
129 1635 0.04
130 822 0.02
131 262 0.01
132 175 0.00
133 146 0.00
134 319 0.01
135 340 0.01
136 650 0.02
137 515 0.01
138 814 0.02
139 2645 0.06
140 10364 0.24
141 12517 0.29
142 6246 0.15
143 1123 0.03
144 289 0.01
145 107 0.00
146 63 0.00
147 125 0.00
148 44 0.00
149 50 0.00
150 40 0.00
151 35 0.00
152 1 0.00
154 19 0.00
155 6 0.00
ACGTcount: A:0.50, C:0.13, G:0.18, T:0.19
Consensus pattern (138 bp):
AAAATGATCGAGATTAAACCATGAGTCAGAAAATGAAAATGATAGAGATTAAACCACGAGTCAAA
AAATGAAAATCAAGGATTAAACCACAAGTCAAAAAATGAAAACGATCAGGATTAAACCATGAGTC
AGAAAATG
Found at i:5263849 original size:72 final size:70
Alignment explanation
Indices: 5263676--5263878 Score: 230
Period size: 72 Copynumber: 2.9 Consensus size: 70
5263666 AATGACCAAA
* * * * **
5263676 ATTAAATCGTGAGTCAGAAAA-CAAAACAACCGAGATTAAATCACAAGTCAAAAAATGAAAATGA
1 ATTAAATCGTGAGTCAGAAAATGAAAACGATCGAGATTAAATCACAAGTCAAAAATTGAAAAACA
* *
5263740 TCAGG
66 ACAGC
*
5263745 ATTAAA-CTGTGAGTCAAAAAATGAAAACGATCGAGATTAAATCACAAGTCAAAAATTGAAAAAC
1 ATTAAATC-GTGAGTCAGAAAATGAAAACGATCGAGATTAAATCACAAGTCAAAAATTGAAAAAC
*
5263809 AACCGTC
65 AACAG-C
* * * * *
5263816 ATTAAATCATGAGTCAGAGAAATGAAAATGATCGATATTAAATGACATGTCAAAAATTGAAAA
1 ATTAAATCGTGAGTCAGA-AAATGAAAACGATCGAGATTAAATCACAAGTCAAAAATTGAAAA
5263879 CTGCTGAGAA
Statistics
Matches: 113, Mismatches: 16, Indels: 7
0.83 0.12 0.05
Matches are distributed among these distances:
68 1 0.01
69 18 0.16
70 39 0.35
71 14 0.12
72 41 0.36
ACGTcount: A:0.51, C:0.13, G:0.15, T:0.21
Consensus pattern (70 bp):
ATTAAATCGTGAGTCAGAAAATGAAAACGATCGAGATTAAATCACAAGTCAAAAATTGAAAAACA
ACAGC
Found at i:5263877 original size:107 final size:106
Alignment explanation
Indices: 5263698--5263948 Score: 249
Period size: 107 Copynumber: 2.4 Consensus size: 106
5263688 GTCAGAAAAC
* **
5263698 AAAACAACCGAGATTAAATCACAAGTCAAAAAATGAAAATGATCAGGATTAAACTGTGAGTCAAA
1 AAAACAACCGACATTAAATCACAAGTCAAAAAATGAAAATGATCAGGATTAAACTGACAGTCAAA
*
5263763 AAATGAAAAC-GATCGAGATTAAATCACAAGTCAAAAATTGA
66 AAATGAAAACTGAT-GAGAATAAATCACAAGTCAAAAATTGA
* ** * *
5263804 AAAACAACCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATC-GATATTAAA-TGACATGTC
1 AAAACAACCGACATTAAATCACAAGTCA-AAAAATGAAAATGATCAG-GATTAAACTGACA-GTC
* * ** * *
5263867 AAAAATTGAAAACTGCTGAGAATAAATCATGAGTCAAAAAAT-C
63 AAAAAATGAAAACTGATGAGAATAAATCACAAGTCAAAAATTGA
* * * * * *
5263910 AAAACCACCGAAACTAAATCACATGTCAAAGAACGAAAA
1 AAAACAACCGACATTAAATCACAAGTCAAAAAATGAAAA
5263949 GTGACCAAAA
Statistics
Matches: 116, Mismatches: 25, Indels: 9
0.77 0.17 0.06
Matches are distributed among these distances:
105 8 0.07
106 49 0.42
107 57 0.49
108 2 0.02
ACGTcount: A:0.52, C:0.15, G:0.14, T:0.19
Consensus pattern (106 bp):
AAAACAACCGACATTAAATCACAAGTCAAAAAATGAAAATGATCAGGATTAAACTGACAGTCAAA
AAATGAAAACTGATGAGAATAAATCACAAGTCAAAAATTGA
Found at i:5263962 original size:142 final size:139
Alignment explanation
Indices: 5263651--5264122 Score: 351
Period size: 142 Copynumber: 3.4 Consensus size: 139
5263641 ATTAAACCGT
* * **
5263651 AAGTCAAAAAATGAAAATGACCAAAATTAAATCGTGAGTCAGAAAA-CAAAACAACCGAGATTAA
1 AAGTC-AAAAATGAAAATGACCAAAATTAAATCATGAGTCAGAAAATGAAAATGACCGAGATTAA
* * * * * *
5263715 ATCACAAGTCAAAAAATGAAAATGATCAGGATTAAACTGTGAGTCAAAAAATGAAAACGATCGAG
65 ATCACAAGTCAAAAAATGAAAATGATCAGGAATAAACTATGAGTCAAAAAATCAAAACCACCGAA
*
5263780 ATTAAATCAC
130 ACTAAATCAC
** *** * *
5263790 AAGTCAAAAATTGAAAAACAACCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATCGATATT
1 AAGTCAAAAA-TG-AAAATGACCAAAATTAAATCATGAGTCAGA-AAATGAAAATGACCGAGATT
* * * * *
5263855 AAATGACATGTCAAAAATTGAAAACTGCTGA-GAATAAA-TCATGAGTCAAAAAATCAAAACCAC
63 AAATCACAAGTCAAAAAATGAAAA-TGATCAGGAATAAACT-ATGAGTCAAAAAATCAAAACCAC
5263918 CGAAACTAAATCAC
126 CGAAACTAAATCAC
* * * * * *
5263932 ATGTCAAAGAACGAAAAGTGACCAAAATTAAGTCACGAGTTAAAAAATGAAAATGACC-AGGATT
1 AAGTCAAA-AATGAAAA-TGACCAAAATTAAATCATGAGTCAGAAAATGAAAATGACCGA-GATT
*** * * * * * * * * ** *
5263996 AAA-CTGTGAGTCAAAAAATGAAAATGACCCGTACTAAACTACGAGTTAGAAAATAAAAAAGATC
63 AAATC-ACAAGTCAAAAAATGAAAATGATCAGGAATAAACTATGAGTCAAAAAATCAAAACCACC
* * *
5264060 GAGATTAAACCAC
127 GAAACTAAATCAC
* ** * *
5264073 AAGTCAGAAAATGAAAATGATCAGGATTAAATCACGAGTCAAAAAATGAA
1 AAGTCA-AAAATGAAAATGACCAAAATTAAATCATGAGTCAGAAAATGAA
5264123 TACAATCGGG
Statistics
Matches: 255, Mismatches: 65, Indels: 25
0.74 0.19 0.07
Matches are distributed among these distances:
138 5 0.02
139 7 0.03
140 55 0.22
141 85 0.33
142 97 0.38
143 6 0.02
ACGTcount: A:0.52, C:0.14, G:0.15, T:0.19
Consensus pattern (139 bp):
AAGTCAAAAATGAAAATGACCAAAATTAAATCATGAGTCAGAAAATGAAAATGACCGAGATTAAA
TCACAAGTCAAAAAATGAAAATGATCAGGAATAAACTATGAGTCAAAAAATCAAAACCACCGAAA
CTAAATCAC
Found at i:5266153 original size:72 final size:71
Alignment explanation
Indices: 5266003--5266175 Score: 188
Period size: 72 Copynumber: 2.4 Consensus size: 71
5265993 CAAAAACAAC
* ** ** *
5266003 CGAGATTAAACCACGAGTCAAAAAATG-AAAATGATCAG-GATTAAATCATGAGGCAAAAAATGA
1 CGAGATTAAATCAAAAGTCAAAAAATGAAAAACAATC-GTCATTAAATCATGAGGCAAAAAATGA
5266066 AAATGAT
65 AAATGAT
* *
5266073 CGAGATTAAATCAAAAGTCAAAAAATGAAAAACAATCGTCATTAAATCATGAGTCAGAGAAATGA
1 CGAGATTAAATCAAAAGTCAAAAAATGAAAAACAATCGTCATTAAATCATGAGGCA-AAAAATGA
5266138 AAATGAT
65 AAATGAT
* * * * * *
5266145 TGATATTAAATCACATGTCAGAAATTGAAAA
1 CGAGATTAAATCAAAAGTCAAAAAATGAAAA
5266176 CTACTGAGAA
Statistics
Matches: 86, Mismatches: 14, Indels: 4
0.83 0.13 0.04
Matches are distributed among these distances:
70 25 0.29
71 22 0.26
72 39 0.45
ACGTcount: A:0.51, C:0.11, G:0.16, T:0.21
Consensus pattern (71 bp):
CGAGATTAAATCAAAAGTCAAAAAATGAAAAACAATCGTCATTAAATCATGAGGCAAAAAATGAA
AATGAT
Found at i:5267905 original size:10 final size:11
Alignment explanation
Indices: 5267884--5267912 Score: 51
Period size: 10 Copynumber: 2.7 Consensus size: 11
5267874 TTAGAAAATG
5267884 AAAATGATAAA
1 AAAATGATAAA
5267895 AAAATGA-AAA
1 AAAATGATAAA
5267905 AAAATGAT
1 AAAATGAT
5267913 TGAGAGTAAA
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
10 10 0.59
11 7 0.41
ACGTcount: A:0.72, C:0.00, G:0.10, T:0.17
Consensus pattern (11 bp):
AAAATGATAAA
Found at i:5268395 original size:177 final size:175
Alignment explanation
Indices: 5267950--5268396 Score: 427
Period size: 177 Copynumber: 2.5 Consensus size: 175
5267940 AATGCGATCG
* * * * *
5267950 AGATTAAATCACGAGTCAAGAAATAAAAATGATCGTGATTAAAACACGAGTCAAAAAATGAAGAA
1 AGATTAAACCACGAGTCAAAAAATGAAAATGATCCTGATTAAACCACGAGTCAAAAAATGAA-AA
* * * * *
5268015 CGACCAAGATTAAATCACAAGTCAAAAAAACAAAAATGATCACGATTAAACCGTGAGTCGAAAGA
65 CGACC-AGATTAAACCACAAGTCAAAAAAACAAAAATGATCAAGATTAAACCATGAGTCAAAAAA
* ** **
5268080 TGAAAATGACGGGGATTAAACCTTAAGTCAAAAAATGAAAACAACCT
129 TGAAAAGGACCAGGATTAAACCGCAAGTCAAAAAATGAAAACAACCT
* * * * * *
5268127 AGGTTAAACCACAAGTCAGAAAATGAAAACGA--CTAGGATTAAACCACAAGTCAGAAAATGAAA
1 AGATTAAACCACGAGTCAAAAAATGAAAATGATCCT--GATTAAACCACGAGTCAAAAAATGAAA
*** * * *
5268190 ACGATTGGGATTAAACTACCCA-TCAAAAAAAGAAAAATGAT-AAGAATTAAACCATGAGTCAAA
64 ACGA-CCAGATTAAACCA-CAAGTCAAAAAAACAAAAATGATCAAG-ATTAAACCATGAGTCAAA
* * * * **
5268253 AAATGAAAAAGGACCATGATTAGATCGCGAGTCAAAAAATGAAAATGA-CT
126 AAATG-AAAAGGACCAGGATTAAACCGCAAGTCAAAAAATGAAAACAACCT
* * * *
5268303 ATGATTAAACCATGAGTCAAAAAATGAAAATAATCCTGATTAAGCCATGAGTCAAAAAATGAAAA
1 A-GATTAAACCACGAGTCAAAAAATGAAAATGATCCTGATTAAACCACGAGTCAAAAAATGAAAA
*
5268368 TGAGCCAGATTAAACCACAAGTCAAAAAA
65 CGA-CCAGATTAAACCACAAGTCAAAAAA
5268397 TGGAAACAAC
Statistics
Matches: 210, Mismatches: 50, Indels: 20
0.75 0.18 0.07
Matches are distributed among these distances:
175 3 0.01
176 56 0.27
177 149 0.71
179 2 0.01
ACGTcount: A:0.52, C:0.15, G:0.16, T:0.18
Consensus pattern (175 bp):
AGATTAAACCACGAGTCAAAAAATGAAAATGATCCTGATTAAACCACGAGTCAAAAAATGAAAAC
GACCAGATTAAACCACAAGTCAAAAAAACAAAAATGATCAAGATTAAACCATGAGTCAAAAAATG
AAAAGGACCAGGATTAAACCGCAAGTCAAAAAATGAAAACAACCT
Found at i:5268415 original size:212 final size:205
Alignment explanation
Indices: 5268034--5268539 Score: 471
Period size: 212 Copynumber: 2.4 Consensus size: 205
5268024 TTAAATCACA
* * * ** * * **
5268034 AGTCAAAAAAACAAAAATGAT-CACGATTAAACCGTGAGTCGAAAGATGAAAATGACGGGGATTA
1 AGTC-AAAAAATAAAAAGGATCCA-GATTAAATCACGAGTCAAAAAATGAAAATGAC-TAGATTA
* * * * * *
5268098 AACCTTAAGTCAAAAAATGAAAACAACCTAGGTTAAACCACAAGTCAGAAAATGAAAACGACTAG
63 AACCATGAGTCAAAAAATGAAAATAACCTAGATTAAACCACAAGTCAAAAAATGAAAACGACCAG
* * *** *
5268163 GATTAAACCACAAGTCAGAAAATGAAAACGATTGGGATTAAACTACCCATCAAAAAAAGAAAAAT
128 GATTAAACCACAAGTCAAAAAATGAAAACAACCAGGATTAAA-T---CACCAAAAAAA-AAAAAT
5268228 GATAAGAATTAAACCATG
188 GATAAGAATTAAACCATG
* *
5268246 AGTCAAAAAATGAAAAAGGA-CCATGATTAGATCGCGAGTCAAAAAATGAAAATGACTATGATTA
1 AGTCAAAAAAT-AAAAAGGATCCA-GATTAAATCACGAGTCAAAAAATGAAAATGACTA-GATTA
* ** *
5268310 AACCATGAGTCAAAAAATGAAAATAATCCT-GATTAAGCCATGAGTCAAAAAATGAAAATGAGCC
63 AACCATGAGTCAAAAAATGAAAATAA-CCTAGATTAAACCACAAGTCAAAAAATGAAAACGA-CC
* **
5268374 A-GATTAAACCACAAGTCAAAAAATGGAAACAACCAGGATTAAATCACCAGTAAAAAAAAATGAT
126 AGGATTAAACCACAAGTCAAAAAATGAAAACAACCAGGATTAAATCACCAAAAAAAAAAAATGAT
* *
5268438 CAGGATTAAACCATG
191 AAGAATTAAACCATG
* * * * * * * *
5268453 GGTCAAAAAATAAAAATGATCGAGATTAAATTATGAGTCAGAAAATGAAAATGGCTGAGAATAAA
1 AGTCAAAAAATAAAAAGGATCCAGATTAAATCACGAGTCAAAAAATGAAAATGACT-AGATTAAA
* * *
5268518 CCACGAGTTATAAAATGAAAAT
65 CCATGAGTCAAAAAATGAAAAT
5268540 GCGAGGGATT
Statistics
Matches: 243, Mismatches: 44, Indels: 20
0.79 0.14 0.07
Matches are distributed among these distances:
206 59 0.24
207 35 0.14
208 8 0.03
211 7 0.03
212 129 0.53
213 5 0.02
ACGTcount: A:0.51, C:0.14, G:0.17, T:0.18
Consensus pattern (205 bp):
AGTCAAAAAATAAAAAGGATCCAGATTAAATCACGAGTCAAAAAATGAAAATGACTAGATTAAAC
CATGAGTCAAAAAATGAAAATAACCTAGATTAAACCACAAGTCAAAAAATGAAAACGACCAGGAT
TAAACCACAAGTCAAAAAATGAAAACAACCAGGATTAAATCACCAAAAAAAAAAAATGATAAGAA
TTAAACCATG
Found at i:5268877 original size:71 final size:71
Alignment explanation
Indices: 5268793--5269032 Score: 216
Period size: 71 Copynumber: 3.4 Consensus size: 71
5268783 AATGATCAGG
* * * * *
5268793 ATTAAACCGTGAGTCAAAAAATAAAAACGATCGAGATTACATCACAAGTCAGAAAATGAAAAACA
1 ATTAAATCATGAGTCAAAAAATAAAAACGATCGAAATTAAATCACATGTCAGAAAATGAAAAACA
* **
5268858 ACCGTC
66 ACTGAA
* * * *
5268864 ATTAAATCATGAGTCAGAGAAATAACAATGATCGATATTAAATCACATGTCA-AAAATCG-AAAA
1 ATTAAATCATGAGTCA-AAAAATAAAAACGATCGAAATTAAATCACATGTCAGAAAAT-GAAAAA
*
5268927 CTACTGAGA
64 CAACTGA-A
* * * * * * * **
5268936 A-TAAATCTTGAGTTAGAAAATTAAAACCATCGAAACTAAATCACATGTCAGAGAATGAAAAATG
1 ATTAAATCATGAGTCAAAAAATAAAAACGATCGAAATTAAATCACATGTCAGAAAATGAAAAACA
5269000 ACTGAA
66 ACTGAA
* *
5269006 ATTAAATCACGAGTTAAAAAATAAAAA
1 ATTAAATCATGAGTCAAAAAATAAAAA
5269033 TAATCGGGAT
Statistics
Matches: 134, Mismatches: 29, Indels: 12
0.77 0.17 0.07
Matches are distributed among these distances:
70 30 0.22
71 73 0.54
72 31 0.23
ACGTcount: A:0.51, C:0.14, G:0.13, T:0.21
Consensus pattern (71 bp):
ATTAAATCATGAGTCAAAAAATAAAAACGATCGAAATTAAATCACATGTCAGAAAATGAAAAACA
ACTGAA
Found at i:5268897 original size:72 final size:71
Alignment explanation
Indices: 5268793--5268926 Score: 171
Period size: 72 Copynumber: 1.9 Consensus size: 71
5268783 AATGATCAGG
* *
5268793 ATTAAACCGTGAGTCAAAAAATAAAAACGATCGAGATTACATCACAAGTCAGAAAAT-GAAAAAC
1 ATTAAACCATGAGTCAAAAAATAAAAACGATCGAGATTAAATCACAAGTCA-AAAATCGAAAAAC
5268857 AACCGTC
65 AACCGTC
* * * * * *
5268864 ATTAAATCATGAGTCAGAGAAATAACAATGATCGATATTAAATCACATGTCAAAAATCGAAAA
1 ATTAAACCATGAGTCA-AAAAATAAAAACGATCGAGATTAAATCACAAGTCAAAAATCGAAAA
5268927 CTACTGAGAA
Statistics
Matches: 53, Mismatches: 8, Indels: 3
0.83 0.12 0.05
Matches are distributed among these distances:
71 19 0.36
72 34 0.64
ACGTcount: A:0.51, C:0.16, G:0.13, T:0.20
Consensus pattern (71 bp):
ATTAAACCATGAGTCAAAAAATAAAAACGATCGAGATTAAATCACAAGTCAAAAATCGAAAAACA
ACCGTC
Found at i:5269069 original size:71 final size:72
Alignment explanation
Indices: 5268989--5269132 Score: 181
Period size: 71 Copynumber: 2.0 Consensus size: 72
5268979 CATGTCAGAG
*
5268989 AATGAAAAATGA-CTGAAATTAAA-TCACGAGTTAAAAAATAAAAATA-ATCGGGATTAAAC-TG
1 AATGAAAAATGACCTG-AATTAAACT-ACGAGTTAAAAAATAAAAA-AGATCGAGATTAAACAT-
*
5269050 TGAGTTAAAAA
62 TGAGTCAAAAA
* *
5269061 AATG-AAAATGACCTGTATTAAACTACGAGTTAGAAAATAAAAAAGATCGAGATTAAACATTGAG
1 AATGAAAAATGACCTGAATTAAACTACGAGTTAAAAAATAAAAAAGATCGAGATTAAACATTGAG
5269125 TCAAAAA
66 TCAAAAA
5269132 A
1 A
5269133 TAAAAACGAT
Statistics
Matches: 64, Mismatches: 4, Indels: 9
0.83 0.05 0.12
Matches are distributed among these distances:
70 1 0.02
71 54 0.84
72 9 0.14
ACGTcount: A:0.53, C:0.08, G:0.15, T:0.23
Consensus pattern (72 bp):
AATGAAAAATGACCTGAATTAAACTACGAGTTAAAAAATAAAAAAGATCGAGATTAAACATTGAG
TCAAAAA
Found at i:5270232 original size:213 final size:213
Alignment explanation
Indices: 5269854--5270482 Score: 662
Period size: 213 Copynumber: 3.0 Consensus size: 213
5269844 AAATGACTGG
** * * ** * *
5269854 GATTAAACCATGAGTCAGAAAGTGAATGCGATCGGGTTTAAATCACGAGTCAAGAAATGAAAATG
1 GATTAAACCACAAGTCAGAAAATAAAAACGATCAGGTTTAAATCACGAGTCAAGAAATGAAAACG
* * *
5269919 ATCGTGATTAAAACACGAGTAAAAAAATGAAGAACGACCGAGATTAAACCATAAGTCAAAAAAAA
66 ATCGTGATTAAAACACGACTAAAAAAATGAAAAACGACCGAGATTAAACCACAAGTCAAAAAAAA
* * * * *
5269984 TGAAAATGATCACGATTAAACCGTGAGTCGGAAGATGAAAATGACAGGGATTAAACCATTAGTCA
131 AGAAAATGACCACGATTAAACCGTAAGTCGGAAGATGAAAACGACAGGGATTAAACCATGAGTCA
5270049 AAAAATGAAAACAACCCA
196 AAAAATGAAAACAACCCA
*
5270067 GATTAAACCACAAGTTAGAAAATAAAAACGATCAGGTTTAAATCACGAGTCAAGAAATGAAAACG
1 GATTAAACCACAAGTCAGAAAATAAAAACGATCAGGTTTAAATCACGAGTCAAGAAATGAAAACG
* * *
5270132 ATCGTGATTAAAACACGACTCAAAAAATGAAAAACGACCGAGATTAAATCGCAAGTCAAAAAAAA
66 ATCGTGATTAAAACACGACTAAAAAAATGAAAAACGACCGAGATTAAACCACAAGTCAAAAAAAA
* ** * *
5270197 AGAAAATGACCGCGATTAAATTGTAAGTTGGAAGATGAAAACGACAGGGATTAAACCGTGAGTCA
131 AGAAAATGACCACGATTAAACCGTAAGTCGGAAGATGAAAACGACAGGGATTAAACCATGAGTCA
5270262 AAAAATGAAAACAACCCA
196 AAAAATGAAAACAACCCA
* * * ** * * * *
5270280 GATTAAATCACAAGTCAGAAAGTGAAAAA-GACCAGAATCAAACCACAAGT-TAGAAAATGAAAA
1 GATTAAACCACAAGTCAGAAAAT-AAAAACGATCAGGTTTAAATCACGAGTCAAG-AAATGAAAA
* * * * * ** * *
5270343 TGATTGGGATT-AAACTACCA-TCAAAAAAA-GAAAAATGATAGGGATT-AACCACGAGTCAAAA
64 CGATCGTGATTAAAAC-ACGACT-AAAAAAATGAAAAACGACCGAGATTAAACCACAAGTCAAAA
** * * ** ** * * * *
5270404 AATGA-AAAAGGACCACGATTAGACCACAAGTCAAAAAATGAAAATGACTA-TGATTAATCCATG
127 AAAAAGAAAATGACCACGATTAAACCGTAAGTCGGAAGATGAAAACGAC-AGGGATTAAACCATG
5270467 AGTCAAAAAATGAAAA
191 AGTCAAAAAATGAAAA
5270483 TAATCTTGAT
Statistics
Matches: 347, Mismatches: 64, Indels: 13
0.82 0.15 0.03
Matches are distributed among these distances:
210 57 0.16
211 16 0.05
212 20 0.06
213 249 0.72
214 5 0.01
ACGTcount: A:0.50, C:0.14, G:0.18, T:0.17
Consensus pattern (213 bp):
GATTAAACCACAAGTCAGAAAATAAAAACGATCAGGTTTAAATCACGAGTCAAGAAATGAAAACG
ATCGTGATTAAAACACGACTAAAAAAATGAAAAACGACCGAGATTAAACCACAAGTCAAAAAAAA
AGAAAATGACCACGATTAAACCGTAAGTCGGAAGATGAAAACGACAGGGATTAAACCATGAGTCA
AAAAATGAAAACAACCCA
Found at i:5270581 original size:106 final size:105
Alignment explanation
Indices: 5270349--5270638 Score: 282
Period size: 106 Copynumber: 2.8 Consensus size: 105
5270339 AAAATGATTG
* *
5270349 GGATTAAACTACCA-TCAAAAAAAGAAAAATGAT-AGGGATTAACCACGAGTCAAAAAATGAAAA
1 GGATTAAACTACCAGTCAAAAAAAGAAAAATAATCA-GGATTAACCATGAGTCAAAAAATGAAAA
* * * ** *
5270412 AG-GACCACGATTAGACCACAAGTCAAAAAATGAAAATGACTA
65 TGAG-CCA-GATTAAACCACAAGCCAAAAAATGAAAACAACCA
* * * ** * **
5270454 TGATTAATCCATGAGTCAAAAAATG-AAAATAATCTTGATTAAGCCATGAGTCAAAAAATGAAAA
1 GGATTAAACTACCAGTCAAAAAAAGAAAAATAATCAGGATTAA-CCATGAGTCAAAAAATGAAAA
*
5270518 TGAGCCAGATTAAACCACAAGCCAAAAAATGGAAACAACCA
65 TGAGCCAGATTAAACCACAAGCCAAAAAATGAAAACAACCA
* * * * * *
5270559 GGGTTAAACTACCAGTCAAAAAAAGAAAAACAATCAGGATTAAACCATGGGACAGAAAATGAAAG
1 GGATTAAACTACCAGTCAAAAAAAGAAAAATAATCAGGATT-AACCATGAGTCAAAAAATGAAAA
* *
5270624 TGATCGAGATTAAAC
65 TGAGCCAGATTAAAC
5270639 TATGAGTCAA
Statistics
Matches: 146, Mismatches: 33, Indels: 11
0.77 0.17 0.06
Matches are distributed among these distances:
105 68 0.47
106 75 0.51
107 3 0.02
ACGTcount: A:0.51, C:0.15, G:0.17, T:0.17
Consensus pattern (105 bp):
GGATTAAACTACCAGTCAAAAAAAGAAAAATAATCAGGATTAACCATGAGTCAAAAAATGAAAAT
GAGCCAGATTAAACCACAAGCCAAAAAATGAAAACAACCA
Found at i:5274233 original size:43 final size:43
Alignment explanation
Indices: 5274186--5274270 Score: 143
Period size: 43 Copynumber: 2.0 Consensus size: 43
5274176 ACACGAGTCA
*
5274186 AAAAATGAAGAACGACCGAGATTAAATCGCAAGTCAAAAAAAC
1 AAAAATGAAGAACGACCGAGATTAAATCCCAAGTCAAAAAAAC
* *
5274229 AAAAATGAAGAACGACCGAGATTAAATCCCGAGTCAGAAAAA
1 AAAAATGAAGAACGACCGAGATTAAATCCCAAGTCAAAAAAA
5274271 TGAAAACAAT
Statistics
Matches: 39, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
43 39 1.00
ACGTcount: A:0.54, C:0.16, G:0.18, T:0.12
Consensus pattern (43 bp):
AAAAATGAAGAACGACCGAGATTAAATCCCAAGTCAAAAAAAC
Found at i:5274291 original size:79 final size:78
Alignment explanation
Indices: 5274153--5274315 Score: 177
Period size: 79 Copynumber: 2.1 Consensus size: 78
5274143 GTGAGTCAAG
* * * ** * *
5274153 AAATGAAAACGATCGTGATTAAAACACGAGTCAAAAAATGAAGAACGACCGAGATTAAATCGC-A
1 AAATGAAAACGACCGAGATTAAAACACGAGTCAAAAAATGAAGAACAACAAAGAATAAATCACGA
5274217 AGTCAAAAAAACAA
66 A-TCAAAAAAACAA
* * *
5274231 AAATGAAGAACGACCGAGATTAAATCCCGAGTCAGAAAAATGAA-AACAATAAAGAATAAATCAC
1 AAATGAA-AACGACCGAGATTAAAACACGAGTCA-AAAAATGAAGAACAACAAAGAATAAATCAC
**
5274295 GAATCAAAAAAATGA
64 GAATCAAAAAAACAA
5274310 AAATGA
1 AAATGA
5274316 CCAGGATTAA
Statistics
Matches: 70, Mismatches: 12, Indels: 5
0.80 0.14 0.06
Matches are distributed among these distances:
78 7 0.10
79 52 0.74
80 11 0.16
ACGTcount: A:0.56, C:0.14, G:0.16, T:0.14
Consensus pattern (78 bp):
AAATGAAAACGACCGAGATTAAAACACGAGTCAAAAAATGAAGAACAACAAAGAATAAATCACGA
ATCAAAAAAACAA
Found at i:5274593 original size:71 final size:69
Alignment explanation
Indices: 5274470--5274628 Score: 169
Period size: 71 Copynumber: 2.3 Consensus size: 69
5274460 GATTAAACTG
* * * **
5274470 TGAGTCAAAAAATGAAAACGATCGAGTTAAATCACAAGTCAGAAAATGAAAACAAC-CAGCGTTA
1 TGAGTCAGAAAATGAAAACGATCAAGTTAAATCACAAGTCAGAAAATAAAAACAACTCAG-AATA
5274534 AATCA
65 AATCA
* * * * *
5274539 TGAGTCAGAGAAATGAAAATGATCAATTTTAAATCACATGTCA-AAAATTAAAAACTACTGAGAA
1 TGAGTCAGA-AAATGAAAACGATCAA-GTTAAATCACAAGTCAGAAAA-TAAAAACAACTCAGAA
5274603 TAAATCA
63 TAAATCA
*
5274610 TGAGTCAGAAAATCAAAAC
1 TGAGTCAGAAAATGAAAAC
5274629 CCCAAAAAAC
Statistics
Matches: 74, Mismatches: 12, Indels: 7
0.80 0.13 0.08
Matches are distributed among these distances:
69 8 0.11
70 26 0.35
71 38 0.51
72 2 0.03
ACGTcount: A:0.51, C:0.14, G:0.14, T:0.21
Consensus pattern (69 bp):
TGAGTCAGAAAATGAAAACGATCAAGTTAAATCACAAGTCAGAAAATAAAAACAACTCAGAATAA
ATCA
Found at i:5275708 original size:37 final size:36
Alignment explanation
Indices: 5275620--5275710 Score: 94
Period size: 36 Copynumber: 2.5 Consensus size: 36
5275610 TCAAGAAATG
* * *
5275620 AAAACGATCGTGATTAAAACACAAGTCAAAAAATGA
1 AAAACGACCGAGATTAAAACACAAGTCAAAAAAAGA
* * *
5275656 AGAACGACCGAGATTAAATCGCAAGTCAAAAAAAAGA
1 AAAACGACCGAGATTAAAACACAAGTC-AAAAAAAGA
*
5275693 AAAATGACGCG-GATTAAA
1 AAAACGAC-CGAGATTAAA
5275711 CCGTGAGTTG
Statistics
Matches: 45, Mismatches: 8, Indels: 3
0.80 0.14 0.05
Matches are distributed among these distances:
36 22 0.49
37 21 0.47
38 2 0.04
ACGTcount: A:0.54, C:0.14, G:0.18, T:0.14
Consensus pattern (36 bp):
AAAACGACCGAGATTAAAACACAAGTCAAAAAAAGA
Found at i:5276077 original size:71 final size:71
Alignment explanation
Indices: 5275997--5276195 Score: 199
Period size: 71 Copynumber: 2.8 Consensus size: 71
5275987 TAAGCCATGA
** * * *
5275997 GTCAGAAAATGAAAAATGACCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATCGATATTAA
1 GTCAGAAAATGAAAAATGACCGAAATTAAATCATGAGTCA-AAAAATGAAAATGATCGAAACTAA
5276062 ATCACAT
65 ATCACAT
* * ** *
5276069 GTCA-AAAATCAAAAACT-ACTGAGAA-TAAATCATGAGTCAAAAAATCG-AAACCACCGAAACT
1 GTCAGAAAATGAAAAA-TGACCGA-AATTAAATCATGAGTCAAAAAAT-GAAAATGATCGAAACT
5276130 AAATCACAT
63 AAATCACAT
* * * * *
5276139 GTCAGAGAATGAAAAATGATCGAAATTAAATCATAAGTTAAAAAATAAAAATGATCG
1 GTCAGAAAATGAAAAATGACCGAAATTAAATCATGAGTCAAAAAATGAAAATGATCG
5276196 GGATTAAACT
Statistics
Matches: 100, Mismatches: 20, Indels: 15
0.74 0.15 0.11
Matches are distributed among these distances:
70 30 0.30
71 64 0.64
72 6 0.06
ACGTcount: A:0.51, C:0.14, G:0.14, T:0.21
Consensus pattern (71 bp):
GTCAGAAAATGAAAAATGACCGAAATTAAATCATGAGTCAAAAAATGAAAATGATCGAAACTAAA
TCACAT
Found at i:5276524 original size:139 final size:138
Alignment explanation
Indices: 5276265--5276537 Score: 300
Period size: 139 Copynumber: 2.0 Consensus size: 138
5276255 AAAAATACCA
* * * *
5276265 AGATTAAATCGCGAGTCAAAAAATGAAAACGATTGAGATTAAATCATGAGTCAAAAAATGAAAAC
1 AGATTAAATCACGAGTCAAAAAATGAAAACAACTGAGATTAAATCACGAGTCAAAAAA-GAAAAC
* * * * * *
5276330 GACCAGGATTAAACGACGAGTCAAAAAATGAATACAATCAGGTTTAAATCGCGAGTTAAG-AAAT
65 GACCAGGATTAAACGACGAGTCAAAAAATGAAAACAATAAGGATCAAACCACGAG-TAAGAAAAT
5276394 GAAAACAATC
129 GAAAACAATC
* ** *
5276404 AGATTAAATCATGAGTCAGGAAATGACAACAACTGAGATTAAATCACGAGTCAGAAATAA-AAAA
1 AGATTAAATCACGAGTCAAAAAATGAAAACAACTGAGATTAAATCACGAGTCA-AAA-AAGAAAA
* * * * * *
5276468 TGATCGGGATTAAATC-ACTAGTCAAAAAATGAAAACGATAAGGATCAAACCACGAGTCAGAAAA
64 CGACCAGGATTAAA-CGACGAGTCAAAAAATGAAAACAATAAGGATCAAACCACGAGTAAGAAAA
5276532 TGAAAA
128 TGAAAA
5276538 TGACCGAGAT
Statistics
Matches: 110, Mismatches: 20, Indels: 8
0.80 0.14 0.06
Matches are distributed among these distances:
138 3 0.03
139 101 0.92
140 4 0.04
141 2 0.02
ACGTcount: A:0.50, C:0.13, G:0.18, T:0.19
Consensus pattern (138 bp):
AGATTAAATCACGAGTCAAAAAATGAAAACAACTGAGATTAAATCACGAGTCAAAAAAGAAAACG
ACCAGGATTAAACGACGAGTCAAAAAATGAAAACAATAAGGATCAAACCACGAGTAAGAAAATGA
AAACAATC
Found at i:5276840 original size:71 final size:70
Alignment explanation
Indices: 5276715--5276875 Score: 159
Period size: 71 Copynumber: 2.3 Consensus size: 70
5276705 CAGTTTGAAT
* * *
5276715 CATGAGTCA-AGAAATGAAAATAACTGGGATTAAAGTACAGGTTAAAAAATGAAAAACAACCTAG
1 CATGAGTCAGA-AAATGAAAATAACTGGGATTAAAATACAGGTCAAAAAATG-AAAACAACCTAA
5276779 ATTAAAC
64 ATTAAAC
* ** **
5276786 CATGAGTCAGAAAATGAAAATAAGTGGGATTAAACATTGA-GTCAGAAAAA-GAAAATGACCTAA
1 CATGAGTCAGAAAATGAAAATAACTGGGATTAAA-ATACAGGTCA-AAAAATGAAAACAACCTAA
*
5276849 ATTAAAG
64 ATTAAAC
*
5276856 CACGAG-CTAGAAAATGAAAA
1 CATGAGTC-AGAAAATGAAAA
5276876 CGACTAAGAT
Statistics
Matches: 76, Mismatches: 10, Indels: 9
0.80 0.11 0.09
Matches are distributed among these distances:
69 1 0.01
70 32 0.42
71 35 0.46
72 8 0.11
ACGTcount: A:0.52, C:0.11, G:0.19, T:0.19
Consensus pattern (70 bp):
CATGAGTCAGAAAATGAAAATAACTGGGATTAAAATACAGGTCAAAAAATGAAAACAACCTAAAT
TAAAC
Found at i:5277547 original size:283 final size:283
Alignment explanation
Indices: 5277029--5277583 Score: 592
Period size: 283 Copynumber: 2.0 Consensus size: 283
5277019 TAAAAAAATG
* * * *** ** * *
5277029 AAAAAGAAAAATGATTGGGATTAAACCATGAGTCAAAAAATGATTGCGATTGGGTTTAAATCACG
1 AAAAAGAAAAATGATAGGGATTAAACAACGAGTCAAAAAATGAAAACGATCAGGATTAAACCACG
* * ** * *
5277094 AGTCAAGAAATGAAAACGATCGTGATTAAAACATGAGTCAAAAAATGAAAAACGATCGAGATTAA
66 AGTCAAAAAATGAAAACGATCGAGATTAAAACACAAGTCAAAAAATGAAAAACAATCGACATTAA
* * * *
5277159 ATCGCAAATCAAAGAAATGAAAATGACCGCGAATAAACCGCGAGTCAGAAAATGAAAAGAACCCA
131 ATCACAAATCAAAGAAATGAAAATGACCGAGAATAAACCACGAGTCAGAAAATGAAAACAACCCA
* * * ** *
5277224 GATTAAACCACAAGTCAGAAAATAAAAACGACCAGGATTAAACCACAAGTCAGAAAATAAAAACG
196 GAATAAACCACAAGTCAAAAAACAAAAACGAAAAGGATTAAACCACAAGTCAAAAAATAAAAACG
**
5277289 ATTGGGATTAAAATACCCATCAA
261 ATAAGGATTAAAATACCCATCAA
* **
5277312 AAAAAGAAAAATGATAGGGATTAAACAACGAGTCAAAAAATGAAAATGATCAGGATTAAACCGTG
1 AAAAAGAAAAATGATAGGGATTAAACAACGAGTCAAAAAATGAAAACGATCAGGATTAAACCACG
* * * *
5277377 AGTCAAAAAATGAAAACGATCGAGATTAAATCACAAGTCAGAAAATGAAAAATAATCGTCATTAA
66 AGTCAAAAAATGAAAACGATCGAGATTAAAACACAAGTCAAAAAATGAAAAACAATCGACATTAA
* * * * * * * * *
5277442 ATCATAAGTCAGAGAAATGAAAATGATCGATATTAAATCAC-ATGTCA-AAAATTGAAAACTACT
131 ATCACAAATCAAAGAAATGAAAATGACCGAGAATAAACCACGA-GTCAGAAAA-TGAAAACAACC
* * ** * * * * * *
5277505 TAGAATAAATCATGAGTGAAAAAACGAAAACGAAAAGGATTAAATCACTAGTGAAAAAATGAAAA
194 CAGAATAAACCACAAGTCAAAAAACAAAAACGAAAAGGATTAAACCACAAGTCAAAAAATAAAAA
5277570 CGATAAGGATTAAA
259 CGATAAGGATTAAA
5277584 CCACGAGTCA
Statistics
Matches: 216, Mismatches: 54, Indels: 4
0.79 0.20 0.01
Matches are distributed among these distances:
282 5 0.02
283 211 0.98
ACGTcount: A:0.52, C:0.13, G:0.17, T:0.19
Consensus pattern (283 bp):
AAAAAGAAAAATGATAGGGATTAAACAACGAGTCAAAAAATGAAAACGATCAGGATTAAACCACG
AGTCAAAAAATGAAAACGATCGAGATTAAAACACAAGTCAAAAAATGAAAAACAATCGACATTAA
ATCACAAATCAAAGAAATGAAAATGACCGAGAATAAACCACGAGTCAGAAAATGAAAACAACCCA
GAATAAACCACAAGTCAAAAAACAAAAACGAAAAGGATTAAACCACAAGTCAAAAAATAAAAACG
ATAAGGATTAAAATACCCATCAA
Found at i:5278148 original size:104 final size:104
Alignment explanation
Indices: 5277940--5278184 Score: 249
Period size: 104 Copynumber: 2.3 Consensus size: 104
5277930 CAAAAATTAG
* * * * ** **
5277940 AAATGATCGGGATTAAACCACTAGTCAAAAAAAGAAAAATGAACAGGATTAAACCGTGAGTCAGG
1 AAATGATCGAGATTAAACCA-TGGTCAAAAAATG-AAAACGAACAGGATTAAACCACGAGTCAAA
** ** *
5278005 AAATGAAAATGACCGAATTTAAATCGTGAGTCAGAAAATGA
64 AAATGAAAACAACCGAATTTAAATCACGAGTAAGAAAATGA
*
5278046 AAATGATCGAGATTAAACCATGGTCAAAAAATGAAAACGACCAGGATTAAACCACGAGTCAAAAA
1 AAATGATCGAGATTAAACCATGGTCAAAAAATGAAAACGAACAGGATTAAACCACGAGTCAAAAA
* * **
5278111 ATGAATACAATCGGGTTTAAATCACGAGCTAAG-AAATGA
66 ATGAAAACAACCGAATTTAAATCACGAG-TAAGAAAATGA
** * *
5278150 AAACAATCGAGATTAAATCATGAGTCAAGAAATGA
1 AAATGATCGAGATTAAACCATG-GTCAAAAAATGA
5278185 CAATGACTGA
Statistics
Matches: 115, Mismatches: 22, Indels: 5
0.81 0.15 0.04
Matches are distributed among these distances:
104 71 0.62
105 25 0.22
106 19 0.17
ACGTcount: A:0.49, C:0.13, G:0.19, T:0.19
Consensus pattern (104 bp):
AAATGATCGAGATTAAACCATGGTCAAAAAATGAAAACGAACAGGATTAAACCACGAGTCAAAAA
ATGAAAACAACCGAATTTAAATCACGAGTAAGAAAATGA
Found at i:5280678 original size:106 final size:106
Alignment explanation
Indices: 5280306--5280827 Score: 282
Period size: 106 Copynumber: 4.9 Consensus size: 106
5280296 AAATGATTAG
* * ** * * * * *
5280306 GATTAAACCATGAGTCAAAAAATGAACGCGATCGGGTTTAAATCACGAGTCAAGAAATG-AAAAT
1 GATTAAACCACGAGTCAGAAAATGAAAACGATCGAGATTAAACCACAAGTCAA-AAAAGAAAAAT
* * * * * * *
5280370 GATCGTGATTAAAACACGAGTCAAAAAATGAAGAACAATCGA-
65 GATAGGGATTAAACCACGAGTCAAAAAATAAAAAACGA-CCAC
* * * * * * ***
5280412 GATTAAATCGCAAGTCAAAAAAATGAAAATGA-CGGGGATTAAACCGTGAGTCAAAAAATGAAAA
1 GATTAAACCACGAGTC-AGAAAATGAAAACGATC-GAGATTAAACCACAAGTCAAAAAA-GAAAA
*** ** * * *
5280476 CA--ACCCGGATTAAACCATAAGTTAGAAAAT-GAAAACGACCAC
63 -ATGATAGGGATTAAACCACGAGTCAAAAAATAAAAAACGACCAC
* * * * *
5280518 GATTAAACCACAAGTTAGAAAATGAAAACGATTGGGATTAAACTACCCAA--CAAAAAAGAAAAA
1 GATTAAACCACGAGTCAGAAAATGAAAACGATCGAGATTAAAC--CACAAGTCAAAAAAGAAAAA
*
5280581 TGATAGGGATTAAACCACGAGTCAAAAAATAAAAAAGGACCAC
64 TGATAGGGATTAAACCACGAGTCAAAAAATAAAAAACGACCAC
* * * *
5280624 GATTAGACTACGAGTCAGAAAATGAAAACGAGCCAGATTAAACCACAAGTCAAAAAATGGAAACA
1 GATTAAACCACGAGTCAGAAAATGAAAACGATCGAGATTAAACCACAAGTCAAAAAA--GAAA-A
** * *
5280689 A--CCA-GGATTAAACCACCAGTCAAAAAA-AGAAAAACGATCA-
63 ATGATAGGGATTAAACCACGAGTCAAAAAATA-AAAAACGACCAC
* * * * ** *
5280729 GAATTAAACCATGGGTCAGAAAATGAAAATGATCGAGATTAAACTATGAGTCAGAAAATG-AAAA
1 G-ATTAAACCACGAGTCAGAAAATGAAAACGATCGAGATTAAACCACAAGTCA-AAAAAGAAAAA
* * * *
5280793 TGACT-GAGAATAAACCACGAGTCATAAAATGAAAA
64 TGA-TAGGGATTAAACCACGAGTCAAAAAATAAAAA
5280828 TGCGAGGGAT
Statistics
Matches: 317, Mismatches: 74, Indels: 50
0.72 0.17 0.11
Matches are distributed among these distances:
103 3 0.01
104 11 0.03
105 56 0.18
106 181 0.57
107 56 0.18
108 7 0.02
109 3 0.01
ACGTcount: A:0.51, C:0.15, G:0.18, T:0.16
Consensus pattern (106 bp):
GATTAAACCACGAGTCAGAAAATGAAAACGATCGAGATTAAACCACAAGTCAAAAAAGAAAAATG
ATAGGGATTAAACCACGAGTCAAAAAATAAAAAACGACCAC
Found at i:5282539 original size:71 final size:71
Alignment explanation
Indices: 5282325--5282773 Score: 198
Period size: 71 Copynumber: 6.4 Consensus size: 71
5282315 AAACGACGGG
* * * * *
5282325 GATTAAACCGTGAGTCAAAAAATG-AAAACAA-CCCGGATTAAAG-CACAAGTTAGAAAATGAAA
1 GATTAAACCATGAGTCAAAAAATGAAAAATAATCCC-GATT-AAGCCACGAGTCAAAAAATGAAA
* * *
5282387 ACGACCAG
64 ATGACTAT
** ** *** * * * *
5282395 GATTAAACCACAAGTCAAAAAATG-AAAACGATTGAGATTAAACTACCCA-T-AAAAAA-AAAAA
1 GATTAAACCATGAGTCAAAAAATGAAAAATAATCCCGATTAAGCCA-CGAGTCAAAAAATGAAAA
*
5282456 TGA-TAGG
65 TGACTA-T
*
5282463 GATTAAACTATGAG-CAAAAAAATGAAAAA-AGA-CCACGATT-AGACCACGAGTCAAAAAATGA
1 GATTAAACCATGAGTC-AAAAAATGAAAAATA-ATCC-CGATTAAG-CCACGAGTCAAAAAATGA
5282524 AAATGACTAT
62 AAATGACTAT
* * *
5282534 GATTAAACCATGAGTCAAAAAATGAAAAATAATCCTGATTAAGCCATGAGTCAGAAAATGAAAAT
1 GATTAAACCATGAGTCAAAAAATGAAAAATAATCCCGATTAAGCCACGAGTCAAAAAATGAAAAT
*
5282599 GAGCCA-
66 GA-CTAT
*** * * * * *
5282605 GATTAAACCGCAAGTCAAAAAATG-GAAACAA-CCAGGATTAAAG-CACCAGTCAAAAAAAGAAA
1 GATTAAACCATGAGTCAAAAAATGAAAAATAATCC-CGATT-AAGCCACGAGTCAAAAAATG-AA
* *
5282667 AACGA-TCAG
63 AATGACT-AT
* * ** ** * * ** *
5282676 GATTAAACCATGGGTCAGAAAATG-AAAATGGTCGAGATTAAACTATTAGTCAGAAAATGAAAAT
1 GATTAAACCATGAGTCAAAAAATGAAAAATAATCCCGATTAAGCCACGAGTCAAAAAATGAAAAT
5282740 GACTGA-
66 GACT-AT
* * *
5282746 GAATAAACCACGAGTCATAAAATGAAAA
1 GATTAAACCATGAGTCAAAAAATGAAAA
5282774 TGCGAGGGAT
Statistics
Matches: 286, Mismatches: 66, Indels: 53
0.71 0.16 0.13
Matches are distributed among these distances:
67 2 0.01
68 29 0.10
69 21 0.07
70 89 0.31
71 134 0.47
72 11 0.04
ACGTcount: A:0.52, C:0.14, G:0.17, T:0.17
Consensus pattern (71 bp):
GATTAAACCATGAGTCAAAAAATGAAAAATAATCCCGATTAAGCCACGAGTCAAAAAATGAAAAT
GACTAT
Found at i:5282762 original size:106 final size:106
Alignment explanation
Indices: 5282195--5283153 Score: 405
Period size: 106 Copynumber: 9.1 Consensus size: 106
5282185 TTAAATCATG
* * * * * * *
5282195 AGTCAAGAAATGAAAACGA-TCGTGATTAAAACAGGAGTCAAAAAATGAAGAACGATC-GAGATT
1 AGTCAAAAAATGAAAATGACTAG-GATTAAACCACGAGTCAAAAAATGAAAAACAATCAG-GATT
* * * * * ***
5282258 AAATCGTAAGTCAAAAAAATGAAAATGATCGC-GATTAAACCGTG
64 AAACCATGAGTC-AGAAAATGAAAATGAGC-CAGATTAAACCACA
** * * ** ** * *
5282302 AGTCGGAAGATGAAAACGACGGGGATTAAACCGTGAGTCAAAAAATG-AAAACAACCCGGATTAA
1 AGTCAAAAAATGAAAATGACTAGGATTAAACCACGAGTCAAAAAATGAAAAACAATCAGGATTAA
* ** * *
5282366 AGCACAAGTTAGAAAATGAAAACGA-CCAGGATTAAACCACA
66 ACCATGAGTCAGAAAATGAAAATGAGCCA-GATTAAACCACA
* * * * **
5282407 AGTCAAAAAATGAAAACGA-TTGAGATTAAACTACCCA-T-AAAAAA--AAAAATGAT-AGGGAT
1 AGTCAAAAAATGAAAATGACTAG-GATTAAACCA-CGAGTCAAAAAATGAAAAACAATCA-GGAT
* * * * *
5282466 TAAACTATGAG-CAAAAAAATGAAAA-AAGACCACGATTAGACCACG
63 TAAACCATGAGTC-AGAAAATGAAAATGAG-CCA-GATTAAACCACA
* * * **
5282511 AGTCAAAAAATGAAAATGACTATGATTAAACCATGAGTCAAAAAATGAAAAATAATCCTGATTAA
1 AGTCAAAAAATGAAAATGACTAGGATTAAACCACGAGTCAAAAAATGAAAAACAATCAGGATTAA
* *
5282576 GCCATGAGTCAGAAAATGAAAATGAGCCAGATTAAACCGCA
66 ACCATGAGTCAGAAAATGAAAATGAGCCAGATTAAACCACA
* ** * * * * *
5282617 AGTCAAAAAATGGAAACAACCAGGATTAAAGCACCAGTCAAAAAAAGAAAAACGATCAGGATTAA
1 AGTCAAAAAATGAAAATGACTAGGATTAAACCACGAGTCAAAAAATGAAAAACAATCAGGATTAA
* * * **
5282682 ACCATGGGTCAGAAAATGAAAATG-GTCGAGATTAAACTATT
66 ACCATGAGTCAGAAAATGAAAATGAG-CCAGATTAAACCACA
* * * * * *
5282723 AGTCAGAAAATGAAAATGACT-GAGAATAAACCACGAGTCATAAAATGAAAATGCGA--GGGATT
1 AGTCAAAAAATGAAAATGACTAG-GATTAAACCACGAGTCAAAAAATGAAAA-ACAATCAGGATT
* * * * * * * *
5282785 AGACC--GCGTCTTAGATAATGAAAA-CAACCAAAATTAAATCACG
64 AAACCATGAGTC--AGAAAATGAAAATGAGCC-AGATTAAACCACA
* ** * * * * **
5282828 ACTCAAAAAATGAAAACAACAAGGATTAAATCACAAATCAAAAAAATG-AAAATGA-CGAGGATT
1 AGTCAAAAAATGAAAATGACTAGGATTAAACCACGAGTC-AAAAAATGAAAAACAATC-AGGATT
* ** * * **
5282891 AAATCATGAGTCAGGGAA-CAAAAGTGA--TAGGAATTAAACCGTA
64 AAACCATGAGTCAGAAAATGAAAA-TGAGCCA-G-ATTAAACCACA
* * ** * **
5282934 AGTCAAAAAGTGAAAATGACCAAAATTAAATCGTGAGTC-AAAAAT-AAAAACAATC-GAGATTA
1 AGTCAAAAAATGAAAATGACTAGGATTAAACCACGAGTCAAAAAATGAAAAACAATCAG-GATTA
* * * * **
5282996 AATCACGAGTCAAAAAATGAAAATGA-TCAGGATTAAACCATG
65 AACCATGAGTCAGAAAATGAAAATGAGCCA-GATTAAACCACA
* * * * * * *
5283038 AGTCAAAAAATGAAAACGA-TCGAGATTAAATCACAAGTCAGAAAATGAAAAACAA-CCGTCATT
1 AGTCAAAAAATGAAAATGACTAG-GATTAAACCACGAGTCAAAAAATGAAAAACAATCAG-GATT
* * * * *
5283101 AAATCATGAGTCAGAGAAATGAAAATGATCGATATTAAATCACA
64 AAACCATGAGTCAGA-AAATGAAAATGAGCCAGATTAAACCACA
*
5283145 TGTCAAAAA
1 AGTCAAAAA
5283154 TCAAAACTAC
Statistics
Matches: 634, Mismatches: 171, Indels: 94
0.71 0.19 0.10
Matches are distributed among these distances:
102 1 0.00
103 34 0.05
104 123 0.19
105 133 0.21
106 231 0.36
107 103 0.16
108 9 0.01
ACGTcount: A:0.51, C:0.14, G:0.18, T:0.18
Consensus pattern (106 bp):
AGTCAAAAAATGAAAATGACTAGGATTAAACCACGAGTCAAAAAATGAAAAACAATCAGGATTAA
ACCATGAGTCAGAAAATGAAAATGAGCCAGATTAAACCACA
Found at i:5283150 original size:107 final size:105
Alignment explanation
Indices: 5282969--5283195 Score: 248
Period size: 107 Copynumber: 2.1 Consensus size: 105
5282959 TTAAATCGTG
* *
5282969 AGTCA-AAAAT-AAAAACAATCGAGATTAAATCACGAGTCAAAAAATGAAAATGATCAGGATTAA
1 AGTCAGAAAATGAAAAACAACCGACATTAAATCACGAGTCAAAAAATGAAAATGATCAGGATTAA
* *
5283032 ACCATGAGTCAAAAAATGAAAACGA-TCGAGATTAAATCACA
66 ACCAT-AGTC-AAAAATCAAAACGACTCGAGAATAAATCACA
* * * *
5283073 AGTCAGAAAATGAAAAACAACCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATC-GATATT
1 AGTCAGAAAATGAAAAACAACCGACATTAAATCACGAGTCA-AAAAATGAAAATGATCAG-GATT
* * **
5283137 AAATCACAT-GTCAAAAATCAAAACTACTGGAGAATAAATCATG
64 AAA-C-CATAGTCAAAAATCAAAACGACTCGAGAATAAATCACA
5283180 AGTCAGAAAATCGAAA
1 AGTCAGAAAAT-GAAA
5283196 CCACCGAAAC
Statistics
Matches: 103, Mismatches: 12, Indels: 12
0.81 0.09 0.09
Matches are distributed among these distances:
104 5 0.05
105 5 0.05
106 38 0.37
107 47 0.46
108 5 0.05
109 3 0.03
ACGTcount: A:0.52, C:0.14, G:0.15, T:0.19
Consensus pattern (105 bp):
AGTCAGAAAATGAAAAACAACCGACATTAAATCACGAGTCAAAAAATGAAAATGATCAGGATTAA
ACCATAGTCAAAAATCAAAACGACTCGAGAATAAATCACA
Found at i:5284176 original size:94 final size:94
Alignment explanation
Indices: 5284015--5284194 Score: 220
Period size: 94 Copynumber: 1.9 Consensus size: 94
5284005 CCACTAGTCA
* * *
5284015 GAAAAAGAAAAATGAATAGGATTAAACCGTGAGTCAGGAAATGAAAATGATTGGAATTAAGCTAC
1 GAAAAAGAAAAATGAATAGGATTAAACCATGAGTCAGAAAATGAAAACGATTGGAATTAAGCTAC
* *
5284080 GAGT-TAGAAAATGAGAACGATAAAAAAAT
66 GAGTCAAG-AAATGAAAACGATAAAAAAAT
* * ** ** *
5284109 GAAAAAGAAAAATGATTGGGATTAAACCATGAGTCAGAAAATGAATGCGATTGGGTTTAA-ATCA
1 GAAAAAGAAAAATGAATAGGATTAAACCATGAGTCAGAAAATGAAAACGATTGGAATTAAGCT-A
5284173 CGAGTCAAGAAATGAAAACGAT
65 CGAGTCAAGAAATGAAAACGAT
5284195 CGTGATTAAA
Statistics
Matches: 72, Mismatches: 12, Indels: 4
0.82 0.14 0.05
Matches are distributed among these distances:
93 1 0.01
94 69 0.96
95 2 0.03
ACGTcount: A:0.49, C:0.08, G:0.23, T:0.20
Consensus pattern (94 bp):
GAAAAAGAAAAATGAATAGGATTAAACCATGAGTCAGAAAATGAAAACGATTGGAATTAAGCTAC
GAGTCAAGAAATGAAAACGATAAAAAAAT
Found at i:5284431 original size:106 final size:106
Alignment explanation
Indices: 5284321--5284522 Score: 242
Period size: 106 Copynumber: 1.9 Consensus size: 106
5284311 ACAATGAGTC
* * *
5284321 AAAAAATGAAAACAACCCAGATTAAACCACAAGTCAGAAAATGAAAACGACCAGGATTAAACCAC
1 AAAAAATAAAAACAACCCAGATTAAACCACAAGTCAAAAAATGAAAACGACCAAGATTAAACCAC
* *
5284386 AAGTCAAAAAATGAAAACGATTGGGATTAAAATACCCATCA
66 AAGTCAAAAAATGAAAACGATCGAGATTAAAATACCCATCA
** **** * * * * **
5284427 AAAAAATAAAAATGATGGGGATTAAACGACGAGTCAAAAAATGAAAATGATCAAGATTAAACCGT
1 AAAAAATAAAAACAACCCAGATTAAACCACAAGTCAAAAAATGAAAACGACCAAGATTAAACCAC
*
5284492 GAGTCAAAAAATGAAAACGATCGAGATTAAA
66 AAGTCAAAAAATGAAAACGATCGAGATTAAA
5284523 TCACAAGTCA
Statistics
Matches: 78, Mismatches: 18, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
106 78 1.00
ACGTcount: A:0.54, C:0.14, G:0.16, T:0.16
Consensus pattern (106 bp):
AAAAAATAAAAACAACCCAGATTAAACCACAAGTCAAAAAATGAAAACGACCAAGATTAAACCAC
AAGTCAAAAAATGAAAACGATCGAGATTAAAATACCCATCA
Found at i:5291185 original size:20 final size:20
Alignment explanation
Indices: 5291160--5291202 Score: 68
Period size: 20 Copynumber: 2.1 Consensus size: 20
5291150 AAATGATCGC
5291160 GATTAAACCGTGAGTTGGAA
1 GATTAAACCGTGAGTTGGAA
**
5291180 GATTAAATTGTGAGTTGGAA
1 GATTAAACCGTGAGTTGGAA
5291200 GAT
1 GAT
5291203 GAAAATGATG
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
20 21 1.00
ACGTcount: A:0.35, C:0.05, G:0.30, T:0.30
Consensus pattern (20 bp):
GATTAAACCGTGAGTTGGAA
Found at i:5291294 original size:71 final size:72
Alignment explanation
Indices: 5291214--5291595 Score: 258
Period size: 71 Copynumber: 5.4 Consensus size: 72
5291204 AAAATGATGG
* *
5291214 GGATTAAACCGTGAGTCAAAAAATGAAAACAACCCAGATTAAACCACAAGTCAAAAAAATG-AAA
1 GGATTAAACCATGAGTCAAAAAATGAAAACAATCCAGATTAAACCACAAGTCAAAAAAATGAAAA
*
5291278 ACGACTA
66 ATGACTA
* * ** *** * * *
5291285 GGATTAAACCATAAGTCAGAAAATGAAAATGATTGGGATTAAACTACCAA-TGAAAAAAA-GCAA
1 GGATTAAACCATGAGTCAAAAAATGAAAACAATCCAGATTAAACCA-CAAGTCAAAAAAATGAAA
5291348 AATGA-TA
65 AATGACTA
* * * * * **
5291355 GAGATTGAACCACGAGTCAAAAAAAGAAAA-AAGACCACGATTAGACCACGCGTC-AAAAAATG-
1 G-GATTAAACCATGAGTCAAAAAATGAAAACAA-TCCA-GATTAAACCACAAGTCAAAAAAATGA
5291417 AAAATGACTA
63 AAAATGACTA
* * * * ** *
5291427 TGATTAAACCATGAGTCAAAAAATTGAAAATAATCCTGATT-AAGCATGAGTCAGAAAAATGAAA
1 GGATTAAACCATGAGTCAAAAAA-TGAAAACAATCCAGATTAAACCACAAGTCAAAAAAATGAAA
5291491 AATGAGC-A
65 AATGA-CTA
* *
5291499 -GATT-AACC--GCACGTCAAAAAATGGAAACAA-CCAGGATTAAACCACCAGTC-AAAAAA-GA
1 GGATTAAACCATG-A-GTCAAAAAATGAAAACAATCCA-GATTAAACCACAAGTCAAAAAAATGA
*
5291557 AAAACGA-TCA
63 AAAATGACT-A
* * *
5291567 GGATTAAACTATGGGTCAGAAAATGAAAA
1 GGATTAAACCATGAGTCAAAAAATGAAAA
5291596 ATGATCGAGA
Statistics
Matches: 238, Mismatches: 50, Indels: 47
0.71 0.15 0.14
Matches are distributed among these distances:
68 12 0.05
69 21 0.09
70 49 0.21
71 122 0.51
72 31 0.13
73 3 0.01
ACGTcount: A:0.52, C:0.15, G:0.17, T:0.16
Consensus pattern (72 bp):
GGATTAAACCATGAGTCAAAAAATGAAAACAATCCAGATTAAACCACAAGTCAAAAAAATGAAAA
ATGACTA
Found at i:5292359 original size:174 final size:175
Alignment explanation
Indices: 5292126--5292517 Score: 413
Period size: 174 Copynumber: 2.2 Consensus size: 175
5292116 AATGACCGAA
* * ** * **
5292126 ATTAAATCACGAGTTAAAAAATGAAAATGATCGGGATTAAACTGTTAGTCAAAAAATGAAAATGA
1 ATTAAACCACGAGTCAAAAAATGAAAACAATCGGGATTAAACTGTAAGTCAAAAAATGAAAACAA
* * *
5292191 CCCGTATTAAA-CTACGAGT-TAGAAAATAAAAACGA-TCGAGATTAAA-CCGCGAGTCA-AAA-
66 CCCGGATTAAATC-ACGAGTCAAG-AAATAAAAACGACT-GAGATTAAATCAG-GAGTCAGAAAT
* * *
5292250 AATGAAAATGATCGAGATTAAACCA-TGAGTGAAAAAATGAAAACGATCAGG
127 AA--AAAATGACCGAGATTAAACCACT-AGTCAAAAAATGAAAACGATAAGG
* * * * *
5292301 ATTAAACCACGAGTCAAAAAATGAATACAATTGGGTTTAAA-TGTAAGTTAAGAAATGAAAACAA
1 ATTAAACCACGAGTCAAAAAATGAAAACAATCGGGATTAAACTGTAAGTCAAAAAATGAAAACAA
* * * * *
5292365 TCGGGATTAAATCATGAGTCAAGAAATGATAACGACTGAGATTAAATCAGGAGTCAGAAATAAAA
66 CCCGGATTAAATCACGAGTCAAGAAATAAAAACGACTGAGATTAAATCAGGAGTCAGAAATAAAA
*
5292430 AATGACCGAGATTAAATCACTAGTCAAAAAATGAAAACGATAAGG
131 AATGACCGAGATTAAACCACTAGTCAAAAAATGAAAACGATAAGG
* ** *
5292475 ATTAAACCACGAGTCAGAAAATGAAAATGATCGAGATTAAACT
1 ATTAAACCACGAGTCAAAAAATGAAAACAATCGGGATTAAACT
5292518 ACTAACCAGA
Statistics
Matches: 178, Mismatches: 31, Indels: 16
0.79 0.14 0.07
Matches are distributed among these distances:
174 131 0.74
175 45 0.25
176 2 0.01
ACGTcount: A:0.49, C:0.12, G:0.18, T:0.21
Consensus pattern (175 bp):
ATTAAACCACGAGTCAAAAAATGAAAACAATCGGGATTAAACTGTAAGTCAAAAAATGAAAACAA
CCCGGATTAAATCACGAGTCAAGAAATAAAAACGACTGAGATTAAATCAGGAGTCAGAAATAAAA
AATGACCGAGATTAAACCACTAGTCAAAAAATGAAAACGATAAGG
Found at i:5292373 original size:209 final size:209
Alignment explanation
Indices: 5292137--5292516 Score: 459
Period size: 209 Copynumber: 1.8 Consensus size: 209
5292127 TTAAATCACG
** * *
5292137 AGTTAAAAAATGAAAATGATCGGGATTAAA-C-TGTTAGTCAAAAAATGAAAATGACCCG-TATT
1 AGTTAAAAAATGAAAACAATCGGGATTAAATCATG--AGTCAAAAAATGAAAACGA-CCGAGATT
* * * *
5292199 AAA-CTACGAGTTAGAAA-ATAAAAACGATCGAGATTAAACCGCGAGTCAAAAAATGAAAATGAT
63 AAATC-ACGAGTCAGAAATA-AAAAACGACCGAGATTAAACCACGAGTCAAAAAATGAAAACGAT
* * *
5292262 -CGAGATTAAACCATGAGTGAAAAAATGAAAACGATC-AGGATTAAACCACGAGTCAAAAAATGA
126 AAG-GATTAAACCACGAGTCAAAAAATGAAAACGATCGA-GATTAAACCACGAGTCAAAAAATGA
5292325 ATACAATTGGGTTTAAATGTA
189 ATACAATTGGGTTTAAATGTA
* * * *
5292346 AGTTAAGAAATGAAAACAATCGGGATTAAATCATGAGTCAAGAAATGATAACGACTGAGATTAAA
1 AGTTAAAAAATGAAAACAATCGGGATTAAATCATGAGTCAAAAAATGAAAACGACCGAGATTAAA
* * * *
5292411 TCAGGAGTCAGAAATAAAAAATGACCGAGATTAAATCACTAGTCAAAAAATGAAAACGATAAGGA
66 TCACGAGTCAGAAATAAAAAACGACCGAGATTAAACCACGAGTCAAAAAATGAAAACGATAAGGA
* *
5292476 TTAAACCACGAGTCAGAAAATGAAAATGATCGAGATTAAAC
131 TTAAACCACGAGTCAAAAAATGAAAACGATCGAGATTAAAC
5292517 TACTAACCAG
Statistics
Matches: 143, Mismatches: 21, Indels: 14
0.80 0.12 0.08
Matches are distributed among these distances:
208 2 0.01
209 134 0.94
210 5 0.03
211 2 0.01
ACGTcount: A:0.49, C:0.12, G:0.18, T:0.21
Consensus pattern (209 bp):
AGTTAAAAAATGAAAACAATCGGGATTAAATCATGAGTCAAAAAATGAAAACGACCGAGATTAAA
TCACGAGTCAGAAATAAAAAACGACCGAGATTAAACCACGAGTCAAAAAATGAAAACGATAAGGA
TTAAACCACGAGTCAAAAAATGAAAACGATCGAGATTAAACCACGAGTCAAAAAATGAATACAAT
TGGGTTTAAATGTA
Found at i:5292541 original size:71 final size:70
Alignment explanation
Indices: 5292402--5292587 Score: 182
Period size: 71 Copynumber: 2.6 Consensus size: 70
5292392 GATAACGACT
* * * ** *
5292402 GAGATTAAATCAGGAGTCAG-AAATAAAAAATGACCGAGATTAAA-TCACTAGTCAAAAAATGAA
1 GAGATTAAA-CACGAGTCAGAAAAT-GAAAATGATCGAGATTAAACTCACTAACCAAAAAAGGAA
5292465 AACGATA
64 AACGATA
5292472 -AGGATTAAACCACGAGTCAGAAAATGAAAATGATCGAGATTAAACT-ACTAACCAGAAAAAGGA
1 GA-GATTAAA-CACGAGTCAGAAAATGAAAATGATCGAGATTAAACTCACTAACCA-AAAAAGGA
*
5292535 AAACGATC
63 AAACGATA
* * * * *
5292543 GAGATTAAACATTGAGTTAGAAAACGAAAATGATTGATATTAAAC
1 GAGATTAAACA-CGAGTCAGAAAATGAAAATGATCGAGATTAAAC
5292588 CACAAGTTAG
Statistics
Matches: 97, Mismatches: 13, Indels: 11
0.80 0.11 0.09
Matches are distributed among these distances:
69 1 0.01
70 41 0.42
71 54 0.56
72 1 0.01
ACGTcount: A:0.51, C:0.12, G:0.18, T:0.19
Consensus pattern (70 bp):
GAGATTAAACACGAGTCAGAAAATGAAAATGATCGAGATTAAACTCACTAACCAAAAAAGGAAAA
CGATA
Found at i:5293578 original size:106 final size:104
Alignment explanation
Indices: 5292993--5293602 Score: 335
Period size: 106 Copynumber: 5.8 Consensus size: 104
5292983 TAAAAAAATG
** * ** * * **
5292993 AAAAAGAAAAATGATTGGGATTAAACCATGAGTCAAAAAATGAATGCGATCGGGTTTAAATCATG
1 AAAAAGAAAAATGATCAGGATTAAACCATGAGTCAAAAAATGAAAG-GA-CCAGATTAAACCACA
* * * *
5293058 AGTCAAGAAATGAAAACGA-TCGTGATTAAAACACGAGTCAA
64 AGTCAAAAAATGAAAACGACTAG-GATTAAACCACCAGTCAA
* * * * * * *
5293099 AAAATGAAGAACGAT-TGAGATTAAATCATAAGTCAAAAAAATGAAAATGACTGC-GATTAAACC
1 AAAAAGAAAAATGATCAG-GATTAAACCATGAGTC-AAAAAATG-AAAGGAC--CAGATTAAACC
*** * * * *** *
5293162 GTGAGTCGAAAGATGAAAAGGA-TAGGGATTAAACCGTGAATCAA
61 ACAAGTCAAAAAATGAAAACGACTA-GGATTAAACCACCAGTCAA
* * ** *
5293206 AAAATGAAAACA--ACCCA-GATTAAACCACAAGTCAAAAAAT-AAA-AACGGCAGGGATTAAAC
1 AAAAAGAAAA-ATGA-TCAGGATTAAACCATGAGTCAAAAAATGAAAGGAC--CA--GATTAAAC
* * * * **
5293266 GACAAGTCAGAAAATGAAAACGATTGGGATTAAAATACCA-TCAA
60 CACAAGTCAAAAAATGAAAACGACTAGGATTAAACCACCAGTCAA
* * * * *
5293310 AAAAAGAAAAATGATAAGGATTAAACAACGAGTCAAAAAATGAAAAAGGACCACAATTAGACCAC
1 AAAAAGAAAAATGATCAGGATTAAACCATGAGTCAAAAAATG--AAAGGACCA-GATTAAACCAC
* * * * * **
5293375 GAGTTAAAAAATGAAAATGACTATGAATAAACCATGAGTCAA
63 AAGTCAAAAAATGAAAACGACTAGGATTAAACCACCAGTCAA
* * ** * * *
5293417 AAAATG-AAAATAATCCTGATTAAGCCATGAGTCAAAAAATGAAAACGAGCCAGATTAAACCGCA
1 AAAAAGAAAAATGATCAGGATTAAACCATGAGTCAAAAAATG-AAAGGA-CCAGATTAAACCACA
*
5293481 AGTCAAAAAATGGAAAA-AACTAGGATTAAACCACCAGTCAA
64 AGTCAAAAAAT-GAAAACGACTAGGATTAAACCACCAGTCAA
* * * * *
5293522 AAAAAGAAAAATGATCAGGATTAAACCATGGGTCAGAAAATGAAAGTGATCGAGATTAAACTATA
1 AAAAAGAAAAATGATCAGGATTAAACCATGAGTCAAAAAATGAAAG-GA-CCAGATTAAACCACA
5293587 AGTCAAAAAATGAAAA
64 AGTCAAAAAATGAAAA
5293603 TTACTGAGAA
Statistics
Matches: 383, Mismatches: 96, Indels: 51
0.72 0.18 0.10
Matches are distributed among these distances:
102 4 0.01
103 4 0.01
104 14 0.04
105 118 0.31
106 165 0.43
107 69 0.18
108 7 0.02
109 2 0.01
ACGTcount: A:0.52, C:0.13, G:0.18, T:0.18
Consensus pattern (104 bp):
AAAAAGAAAAATGATCAGGATTAAACCATGAGTCAAAAAATGAAAGGACCAGATTAAACCACAAG
TCAAAAAATGAAAACGACTAGGATTAAACCACCAGTCAA
Found at i:5294142 original size:106 final size:104
Alignment explanation
Indices: 5293979--5294239 Score: 285
Period size: 106 Copynumber: 2.5 Consensus size: 104
5293969 TCGCGAGTTA
* * * * *
5293979 AAAAATGAAAACAATCAGGATTAAATCATGAGTCAAGAAATGACAACGACTGAGATTAAATCACG
1 AAAAATGAAAACAATAAGGATTAAATCACGAGTCAA-AAATGAAAACGACCGAGATTAAACCACG
* *
5294044 AG-TCAGAAATAA-AAAAATGATCGGGATTAAGTCACT-AGTC
65 AGCT-AGAAA-AAGAAAAATGATCGAGATTAA-ACACTGAGTC
* * *
5294084 AAAAACTGAAAACGATAAGGATTAAATCACGAGTCAGAAAATGAAAATGACCGTGATTAAACCAC
1 AAAAA-TGAAAACAATAAGGATTAAATCACGAGTCA-AAAATGAAAACGACCGAGATTAAACCAC
* * *
5294149 TAGCTAGAAAAAGGAAAATGATCGAGATTAAACATTGAGTC
64 GAGCTAGAAAAAGAAAAATGATCGAGATTAAACACTGAGTC
* * *
5294190 AGAAAATGAAAACCATTAGGATTAAACCACGAGTCAAAAAATGAAAACGA
1 A-AAAATGAAAACAATAAGGATTAAATCACGAGTC-AAAAATGAAAACGA
5294240 TCAAAAAATG
Statistics
Matches: 132, Mismatches: 17, Indels: 13
0.81 0.10 0.08
Matches are distributed among these distances:
105 10 0.08
106 115 0.87
107 7 0.05
ACGTcount: A:0.50, C:0.13, G:0.18, T:0.18
Consensus pattern (104 bp):
AAAAATGAAAACAATAAGGATTAAATCACGAGTCAAAAATGAAAACGACCGAGATTAAACCACGA
GCTAGAAAAAGAAAAATGATCGAGATTAAACACTGAGTC
Found at i:5294254 original size:18 final size:18
Alignment explanation
Indices: 5294218--5294253 Score: 65
Period size: 17 Copynumber: 2.1 Consensus size: 18
5294208 GGATTAAACC
5294218 ACGAGTCAAAAAATGAAA
1 ACGAGTCAAAAAATGAAA
5294236 ACGA-TCAAAAAATGAAA
1 ACGAGTCAAAAAATGAAA
5294253 A
1 A
5294254 AAAAATGATC
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
17 14 0.78
18 4 0.22
ACGTcount: A:0.64, C:0.11, G:0.14, T:0.11
Consensus pattern (18 bp):
ACGAGTCAAAAAATGAAA
Found at i:5294854 original size:106 final size:107
Alignment explanation
Indices: 5294544--5294858 Score: 263
Period size: 106 Copynumber: 3.0 Consensus size: 107
5294534 TTAAACCGTG
* * * *
5294544 AGTCAAAAAATGAAAACAACCCA-GATTAAACCATAAGTCAGAAAATG-AAAACGACCAGGATTA
1 AGTCAAAAAATGGAAACAACCCAGGATTAAACCACAAGTCAAAAAATGAAAAACGATCAGGATTA
** *
5294607 AACCACAAGTCAGAAAATGAAAATGATTCAGATTAAACTACCA
66 AACCATGAGTCAGAAAATGAAAAT-AATCAGATTAAACTACCA
* * *** * **
5294650 A-TGAAAAAA-AGAAA-AATGATAGGGATTAAACCACGAGTCAAAAAATGAAAATA--ATCCTGA
1 AGTCAAAAAATGGAAACAA-CCCA-GGATTAAACCACAAGTCAAAAAATGAAAA-ACGATCAGGA
* * * * ** *
5294710 TTAAGCCTTGAGTCAAAAAATGAAAACGAGCCAAATTAAA-T-CGCA
63 TTAAACCATGAGTCAGAAAATGAAAA-TAATCAGATTAAACTAC-CA
* *
5294755 AGTCAAAAAATGGAAACAA-CCAGGATTAAACCACCAGTCAAAAAAAGAAAAACGATCAGGATTA
1 AGTCAAAAAATGGAAACAACCCAGGATTAAACCACAAGTCAAAAAATGAAAAACGATCAGGATTA
* *
5294819 AACCATGGGTTAGAAAATGAAAATAATCGAGATTAAACTA
66 AACCATGAGTCAGAAAATGAAAATAATC-AGATTAAACTA
5294859 TGAGTCAGAA
Statistics
Matches: 156, Mismatches: 38, Indels: 28
0.70 0.17 0.13
Matches are distributed among these distances:
103 2 0.01
104 6 0.04
105 40 0.26
106 97 0.62
107 8 0.05
108 3 0.02
ACGTcount: A:0.53, C:0.15, G:0.15, T:0.17
Consensus pattern (107 bp):
AGTCAAAAAATGGAAACAACCCAGGATTAAACCACAAGTCAAAAAATGAAAAACGATCAGGATTA
AACCATGAGTCAGAAAATGAAAATAATCAGATTAAACTACCA
Found at i:5294855 original size:176 final size:176
Alignment explanation
Indices: 5294532--5294911 Score: 399
Period size: 176 Copynumber: 2.2 Consensus size: 176
5294522 AAACGATAGG
* * * *
5294532 GATTAAACCGTGAGTCAAAAAATGAAAACAACCCAGATTAAACCATAAGTCAGAAAATGAAAACG
1 GATTAAACCGTGAGTCAAAAAATGAAAACAACCCAAATTAAACCACAAGTCAAAAAATGAAAACA
* * * *
5294597 ACCAGGATTAAACCACAAGTCAGAAAATGAAAATGATTCAGATTAAACTACCAATGAAAAAAAGA
66 ACCAGGATTAAACCACAAGTCAAAAAAAGAAAACGATTCAGATTAAACCACCAATGAAAAAAAGA
* *
5294662 AAAATGATAGGGATTAAACCACGAGTCAAAAAATGAAAATAATCCT
131 AAAATAATAGAGATTAAACCACGAGTCAAAAAATGAAAATAATCCT
* * * * * * *
5294708 GATTAAGCCTTGAGTCAAAAAATGAAAACGAGCCAAATTAAATCGCAAGTCAAAAAATGGAAACA
1 GATTAAACCGTGAGTCAAAAAATGAAAACAACCCAAATTAAACCACAAGTCAAAAAATGAAAACA
* **** * * *
5294773 ACCAGGATTAAACCACCAGTCAAAAAAAGAAAAACGA-TCAGGATTAAACCATGGGTTAGAAAAT
66 ACCAGGATTAAACCACAAGTCAAAAAAAG-AAAACGATTCA-GATTAAACCACCAATGAAAAAAA
* * * * *
5294837 G-AAAATAATCGAGATTAAACTATGAGTCAGAAAATGAAAAT--TACT
129 GAAAAATAATAGAGATTAAACCACGAGTCAAAAAATGAAAATAATCCT
** *
5294882 GATAATAAACCACGAGTCATAAAATGAAAA
1 GAT--TAAACCGTGAGTCAAAAAATGAAAA
5294912 TGCGAGGAAT
Statistics
Matches: 166, Mismatches: 34, Indels: 8
0.80 0.16 0.04
Matches are distributed among these distances:
174 6 0.04
176 138 0.83
177 22 0.13
ACGTcount: A:0.52, C:0.15, G:0.16, T:0.18
Consensus pattern (176 bp):
GATTAAACCGTGAGTCAAAAAATGAAAACAACCCAAATTAAACCACAAGTCAAAAAATGAAAACA
ACCAGGATTAAACCACAAGTCAAAAAAAGAAAACGATTCAGATTAAACCACCAATGAAAAAAAGA
AAAATAATAGAGATTAAACCACGAGTCAAAAAATGAAAATAATCCT
Found at i:5295820 original size:37 final size:37
Alignment explanation
Indices: 5295727--5295806 Score: 110
Period size: 37 Copynumber: 2.2 Consensus size: 37
5295717 AAACGATAAG
* * * *
5295727 GATTAAACCACGAGTCAG--AAAATGAAAATGACCGG
1 GATTAAACCACTAGCCAGAAAAAAGGAAAATGACCGA
5295762 GATTAAACCACTAGCCAGAAAAAAGGAAAATGACCGA
1 GATTAAACCACTAGCCAGAAAAAAGGAAAATGACCGA
5295799 GATTAAAC
1 GATTAAAC
5295807 ATTGAGTTAG
Statistics
Matches: 39, Mismatches: 4, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
35 16 0.41
37 23 0.59
ACGTcount: A:0.49, C:0.17, G:0.20, T:0.14
Consensus pattern (37 bp):
GATTAAACCACTAGCCAGAAAAAAGGAAAATGACCGA
Found at i:5296768 original size:107 final size:106
Alignment explanation
Indices: 5296479--5296825 Score: 263
Period size: 106 Copynumber: 3.3 Consensus size: 106
5296469 AAACAACCCA
** * * * *
5296479 GATTAAACCACAAGTCAAAAAATAAAAACG-GCCAGGATTAAA-CGACAAGTCAGAAAATGAAAA
1 GATTAAACCATGAGTCAGAAAATGAAAACGAGCC-GAATTAAACCG-CAAGTCAAAAAATGAAAA
* *** ** * **
5296542 CGATTGGGATTAAAATACCA-TCAAAAAAAGAAAAATGAT-AGG
64 CAACCAGGATTAAACCACCAGCCAAAAAAAGAAAAAAAATCA-G
* * * * * * *
5296584 GATTAAACCACGAGTCAAAAAATGAAAAAGCA-CCACAATTAGACCACGAGTCAAAAAATGAAAA
1 GATTAAACCATGAGTCAGAAAATGAAAACG-AGCC-GAATTAAACCGCAAGTCAAAAAATGAAAA
** * * ** * **
5296648 TGACTATGATTAAACCATGAGCCAAAAAATGAAAAAAAAATCCT
64 CAACCAGGATTAAACCACCAGCCAAAAAAAG-AAAAAAAATCAG
* *
5296692 GATTAAGCCATGAGTCAGAAAATGAAAACGAGCCGAATTAAACCGCAAGTCAAAAAATGGAAACA
1 GATTAAACCATGAGTCAGAAAATGAAAACGAGCCGAATTAAACCGCAAGTCAAAAAATGAAAACA
* ** *
5296757 ACCAGGATTAAACCACCAGTCAAAAAAAGAAAAACGATTAG
66 ACCAGGATTAAACCACCAGCCAAAAAAAGAAAAAAAATCAG
*
5296798 GATTAAACCATGGGTCAGAAAATGAAAA
1 GATTAAACCATGAGTCAGAAAATGAAAA
5296826 TGATCAAGAT
Statistics
Matches: 188, Mismatches: 47, Indels: 13
0.76 0.19 0.05
Matches are distributed among these distances:
105 27 0.14
106 69 0.37
107 57 0.30
108 35 0.19
ACGTcount: A:0.53, C:0.16, G:0.16, T:0.15
Consensus pattern (106 bp):
GATTAAACCATGAGTCAGAAAATGAAAACGAGCCGAATTAAACCGCAAGTCAAAAAATGAAAACA
ACCAGGATTAAACCACCAGCCAAAAAAAGAAAAAAAATCAG
Found at i:5297208 original size:64 final size:64
Alignment explanation
Indices: 5297114--5297306 Score: 165
Period size: 64 Copynumber: 2.9 Consensus size: 64
5297104 AAACAATCGG
* * * * **
5297114 GATTAAATCATGAGTCAAGAAATGACAACGA-CTGAGGTTAAATCATGAGTCAGAAATAAAAAAT
1 GATTAAATCATGAGTCAAAAAAAGAAAACGATC-GAGATTAAATCACAAGTCAGAAATAAAAAAT
5297178 GATTAAA-CAGTGAGTCAAAAAAAGAAAACGATCGAGATTAAATCACAAGTCAGAAAATGAAAAA
1 GATTAAATCA-TGAGTCAAAAAAAGAAAACGATCGAGATTAAATCACAAGTCAG-AAAT--AAAA
5297242 CAACCGT
62 -AA---T
* * * * * * *
5297249 CATTAAATCATGAGTCAGAGAAATGAAAATGATCGATATTAAATCACATGTCAAAAAT
1 GATTAAATCATGAGTCA-AAAAAAGAAAACGATCGAGATTAAATCACAAGTCAGAAAT
5297307 CGAAAACTAC
Statistics
Matches: 105, Mismatches: 13, Indels: 15
0.79 0.10 0.11
Matches are distributed among these distances:
63 2 0.02
64 42 0.40
65 5 0.05
67 4 0.04
68 2 0.02
71 18 0.17
72 32 0.30
ACGTcount: A:0.50, C:0.12, G:0.17, T:0.21
Consensus pattern (64 bp):
GATTAAATCATGAGTCAAAAAAAGAAAACGATCGAGATTAAATCACAAGTCAGAAATAAAAAAT
Found at i:5297263 original size:71 final size:72
Alignment explanation
Indices: 5297179--5297312 Score: 184
Period size: 72 Copynumber: 1.9 Consensus size: 72
5297169 ATAAAAAATG
5297179 ATTAAACAGTGAGTCA-AAAAAAGAAAACGATCGAGATTAAATCACAAGTCAGAAAAT-GAAAAA
1 ATTAAACAGTGAGTCAGAAAAAAGAAAACGATCGAGATTAAATCACAAGTCA-AAAATCGAAAAA
5297242 CAACCGTC
65 CAACCGTC
* * * * *
5297250 ATTAAATCA-TGAGTCAGAGAAATGAAAATGATCGATATTAAATCACATGTCAAAAATCGAAAA
1 ATTAAA-CAGTGAGTCAGAAAAAAGAAAACGATCGAGATTAAATCACAAGTCAAAAATCGAAAA
5297313 CTACTGAGAA
Statistics
Matches: 55, Mismatches: 5, Indels: 5
0.85 0.08 0.08
Matches are distributed among these distances:
71 18 0.33
72 37 0.67
ACGTcount: A:0.52, C:0.13, G:0.15, T:0.19
Consensus pattern (72 bp):
ATTAAACAGTGAGTCAGAAAAAAGAAAACGATCGAGATTAAATCACAAGTCAAAAATCGAAAAAC
AACCGTC
Found at i:5297329 original size:71 final size:69
Alignment explanation
Indices: 5297188--5297432 Score: 215
Period size: 71 Copynumber: 3.5 Consensus size: 69
5297178 GATTAAACAG
* * * * * * *
5297188 TGAGTCAAAAAAAGAAAACGATCGAGATTAAATCACAAGTCAGAAAATGAAAAACAACCGTCATT
1 TGAGTCAGAAAATGAAAACGATCGAGATTAAATCACATGTCAGAAAATG-AAAACTACTG-AAAT
5297253 AAATCA
64 AAATCA
* *
5297259 TGAGTCAGAGAAATGAAAATGATCGATATTAAATCACATGTCA-AAAATCGAAAACTACTGAGAA
1 TGAGTCAGA-AAATGAAAACGATCGAGATTAAATCACATGTCAGAAAAT-GAAAACTACTGA-AA
5297323 TAAATCA
63 TAAATCA
* * * * * * * *
5297330 TGAGTCAGAAAATCAAAACCA-CAGAAACTAAATCACATGTTATAGAATGAAAAATGACTGAAAT
1 TGAGTCAGAAAATGAAAACGATC-GAGATTAAATCACATGTCAGAAAATGAAAACT-ACTGAAA-
5297394 TAAATCA
63 TAAATCA
* * * *
5297401 CGAGTTAGAAAATGAAAATGACCGAGATTAAA
1 TGAGTCAGAAAATGAAAACGATCGAGATTAAA
5297433 CTGTGAGTGA
Statistics
Matches: 142, Mismatches: 24, Indels: 16
0.78 0.13 0.09
Matches are distributed among these distances:
69 1 0.01
70 33 0.23
71 77 0.54
72 31 0.22
ACGTcount: A:0.51, C:0.13, G:0.15, T:0.20
Consensus pattern (69 bp):
TGAGTCAGAAAATGAAAACGATCGAGATTAAATCACATGTCAGAAAATGAAAACTACTGAAATAA
ATCA
Found at i:5297474 original size:70 final size:71
Alignment explanation
Indices: 5297392--5297524 Score: 180
Period size: 71 Copynumber: 1.9 Consensus size: 71
5297382 AATGACTGAA
* * * * *
5297392 ATTAAATCACGAGTTAGAAAATGAAAATGA-CCGAGATTAAACTGTGAGTGAAAAAATGAAAATG
1 ATTAAATCACGAGTTAGAAAATAAAAAAGATCCAAGATTAAACAGTGAGTCAAAAAATGAAAATG
5297456 ACCCGT
66 ACCCGT
* *
5297462 ATTAAA-CTACGAGTTAGAAAATAAAAAAGATTCAAGATTAAACAGTGAGTCAAAAAATTAAAA
1 ATTAAATC-ACGAGTTAGAAAATAAAAAAGATCCAAGATTAAACAGTGAGTCAAAAAATGAAAA
5297525 ACGCATCGAG
Statistics
Matches: 54, Mismatches: 7, Indels: 3
0.84 0.11 0.05
Matches are distributed among these distances:
69 1 0.02
70 26 0.48
71 27 0.50
ACGTcount: A:0.52, C:0.10, G:0.17, T:0.22
Consensus pattern (71 bp):
ATTAAATCACGAGTTAGAAAATAAAAAAGATCCAAGATTAAACAGTGAGTCAAAAAATGAAAATG
ACCCGT
Found at i:5297524 original size:37 final size:38
Alignment explanation
Indices: 5297479--5297557 Score: 94
Period size: 37 Copynumber: 2.1 Consensus size: 38
5297469 TACGAGTTAG
5297479 AAAA-TAAAAAAG-ATTCAAGATTAAA-CAGTGA-GTCAA
1 AAAATTAAAAAAGCA-TCAAGATTAAACCA-TGAGGTCAA
* *
5297515 AAAATTAAAAACGCATCGAGATTAAACCATGAGGTCAA
1 AAAATTAAAAAAGCATCAAGATTAAACCATGAGGTCAA
5297553 AAAAT
1 AAAAT
5297558 GAAACGACCA
Statistics
Matches: 37, Mismatches: 2, Indels: 6
0.82 0.04 0.13
Matches are distributed among these distances:
36 4 0.11
37 20 0.54
38 13 0.35
ACGTcount: A:0.56, C:0.11, G:0.14, T:0.19
Consensus pattern (38 bp):
AAAATTAAAAAAGCATCAAGATTAAACCATGAGGTCAA
Found at i:5297640 original size:37 final size:37
Alignment explanation
Indices: 5297569--5297640 Score: 92
Period size: 37 Copynumber: 1.9 Consensus size: 37
5297559 AAACGACCAA
* *
5297569 GATTAAATCACCGATTCAAAAAATGAATACCAATCGG
1 GATTAAATCACCGATTCAAAAAATGAAAAACAATCGG
* *
5297606 GATTAAATCGCCGAGTT-AAGAAATGAAAAACAATC
1 GATTAAATCACCGA-TTCAAAAAATGAAAAACAATC
5297641 AAGTTAAATC
Statistics
Matches: 30, Mismatches: 4, Indels: 2
0.83 0.11 0.06
Matches are distributed among these distances:
37 28 0.93
38 2 0.07
ACGTcount: A:0.47, C:0.17, G:0.15, T:0.21
Consensus pattern (37 bp):
GATTAAATCACCGATTCAAAAAATGAAAAACAATCGG
Found at i:5298632 original size:106 final size:103
Alignment explanation
Indices: 5298522--5302695 Score: 481
Period size: 106 Copynumber: 39.8 Consensus size: 103
5298512 CTCCCCATGA
* *
5298522 AAAAAAGAAAAATGATAGGGATTAAACCACGAGTCAAAAAATGAAAAAGGACCATGATTAGACCA
1 AAAAAAGAAAAATGATA-GGATTAAACCACGAGTCAAAAAATG-AAAATGACCATGATTAAACCA
* * *
5298587 CGAGTCAAAAAATGAAAATGGCTATGATTAAACCATGAGTC
64 TGAGTCAAAAAATGAAAATGACTA-GATTAAACCACGAGTC
* ** * ** * *
5298628 AAAAAATG-AAAATAATCTTGATTAAGCCGTGAGTCAGAAAATGAAAATGAGC-TAGATTAAACC
1 AAAAAA-GAAAAATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACCAT-GATTAAACC
* * * ** * * * *
5298691 GTAAGTCAAAAAATGGAAACAACCAGGATTAAAGCACCAATC
63 ATGAGTCAAAAAATGAAAATGACTA-GATTAAACCACGAGTC
* * * * *
5298733 AAAAAAAGAAAAACGATCAGGATTAAACCACGGGTCAAAAAATGAAAATGATCAAGATTAAACTA
1 -AAAAAAGAAAAATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCA
*
5298798 TGAGTCAAAAAATGAAAATGACTGAGAATAAACCACGAGTC
64 TGAGTCAAAAAATGAAAATGACT-AGATTAAACCACGAGTC
* * ** * * * * ** ** *
5298839 ATAAATG-AAAATGCGAGGGATTAGACCGC-A-TCTTAGATAATGAAAACAACCAAAATTAAATC
1 AAAAAAGAAAAATGATA-GGATTAAACCACGAGTC--AAAAAATGAAAATGACCATGATTAAACC
* ** * * * *
5298901 ACT-AGTCAAAAAATAAAAACAACAAGGATTAAATCACAAATC
63 A-TGAGTCAAAAAATGAAAATGACTA-GATTAAACCACGAGTC
* * * * *** * *
5298943 AAAAAA-ATGAAAATGACCAAGATTAAATCATGAGTCATGGAA-CAAAA-G-CGATGGGAATTAA
1 AAAAAAGA--AAAATGA-TAGGATTAAACCACGAGTCAAAAAATGAAAATGACCAT--G-ATTAA
* * * * * **
5299004 ACCGTAAGTCAAAAAATGAAAATGACCAAAATTAAATCGTGAGTC
60 ACCATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * ** ** * * * *
5299049 AGAAAACAAAAACAACCGAGATTAAACCACGAGTCAAAAAA-GAAAATGATCAAGATTAAATCGT
1 AAAAAAGAAAAATGATAG-GATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCAT
** * * *
5299113 GAGTCAAAAAATGAAAACAATCGAGATTAAATCACAAGTC
65 GAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* ** * * * * * * *
5299153 AGAAAATGAAAAACAATCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATCAAT-ATTAAAT
1 A-AAAAAGAAAAATGATAG-GATTAAACCACGAGTCA-AAAAATGAAAATGA-CCATGATTAAAC
** * * * *
5299217 CAAAATGT--AAAAATCAAAAACT-ACTGAGAATAAATCATGAGTC
62 CATGA-GTCAAAAAAT-GAAAA-TGACT-AGATTAAACCACGAGTC
* * * * * * ** * * *
5299260 AGAAAATCGAAACCATCA-A-AACTAAATCAC-ATGTCGGAGAATGAAAAATGTCCGA-AATTAA
1 A-AAAA-AGAAA-AATGATAGGATTAAACCACGA-GTCAAAAAATG-AAAATGACC-ATGATTAA
** ** * ** * *
5299321 GTCACAAGTTAAAAAATGAAAATGACCGGGATTAAA-C-TGAATC
60 ACCATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * * * * *
5299364 AAAAAATG-AAAATGACCCA-TATTAAACTACGAGTTAGAAAAT-AAAAAGACCGA-GATTAAAT
1 AAAAAA-GAAAAATGA--TAGGATTAAACCACGAGTCAAAAAATGAAAATGACC-ATGATTAAAC
* * * *
5299425 CGTGAGTCAGAAAATGAAAACGACCAAGATTAAACCACGAGTC
62 CATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * * * ** * ** *
5299468 AAAAAATGAATACAATCG--A-GTTTAAATCATGAGTTAAGAAATGAAAACAATCGGGATTAAAT
1 AAAAAA-GAA-A-AAT-GATAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAAC
* * ** * * *
5299530 CATGAGTCAAGAAATGACAACAACTGAGGTTAAATCACAAGTC
62 CATGAGTCAAAAAATGAAAATGACT-AGATTAAACCACGAGTC
* ** * ** ** *
5299573 AAAAATA-AAAAATGATCGGGATTAAATTACTAGTCAAAAAATGAAAACAATAAGGATTAAACCA
1 AAAAA-AGAAAAATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCA
* * *
5299637 CGAGTCAAAAAATGAAAATGACCTAGATTAAACCACTAGCC
64 TGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * * ** **
5299678 ATAAAAAGAAAAACGATCGAGATTAAA-CATTGAGTCAGAAAACAAAAATGATTGAT-ATTAAAC
1 A-AAAAAGAAAAATGATAG-GATTAAACCA-CGAGTCAAAAAATGAAAATGA-CCATGATTAAAC
* * **
5299741 CACGAGTCAGAAAATGAAAATGA-T---CCAAA--A--A-T-
62 CATGAGTCAAAAAATGAAAATGACTAGATTAAACCACGAGTC
* *** * * * * * *
5299773 -GAAAA-AAAAATGATCATTTTCTAAACCACAAGTTAGAAAATG--AATGCAACCA-GTTTGAAT
1 AAAAAAGAAAAATGAT-AGGAT-TAAACCACGAGTCAAAAAATGAAAATG--ACCATGATTAAAC
* * ** *
5299833 CATGAGTCAAAAAATGAAAATGATTGGGATTAAAGTACGAGTT
62 CATGAGTCAAAAAATGAAAATGACT-AGATTAAACCACGAGTC
** * * ** ****
5299876 AAAAAATGAAAAACAACCT-GGATTAAACCATGAGTCAAAAAACGAAAACAAGTGGGATTAAA-C
1 AAAAAA-GAAAAATGA--TAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACC
* * *
5299939 ATTGAGTTAGAAAAA-GAAAATGACCTAGATTAAAGCACGAGCC
63 A-TGAGTCA-AAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * ** * ***
5299982 AGAAAATG-GAAATGACTAAGATTAAACCATAAGTCAGAAAAT-AGAAATGACTGGGATTAAACC
1 A-AAAAAGAAAAATGA-TAGGATTAAACCACGAGTCAAAAAATGA-AAATGACCATGATTAAACC
** **
5300045 ACCAGTCAGAAAAA-GAAAAATGAAC-AGGATTAAACCGTGAGTC
63 ATGAGTCA-AAAAATG-AAAATG-ACTA-GATTAAACCACGAGTC
* * * * * * * * **
5300088 AGAAAATG-AAAATGACT-GGAATTAAGCTATGAGTTAGAAAATG---A-GAACA--ATAAAAAA
1 A-AAAAAGAAAAATGA-TAGG-ATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACC
* * * *
5300145 ATGA---AAAAGA--AAAATGATTGGGATTAAACCATGAGTC
63 ATGAGTCAAAAAATGAAAATGACT-AGATTAAACCACGAGTC
* ** * * * * * * *
5300182 AGAAAATG-AATGTGATCGGGTTTAAATCACGAGTCAAGAAATGAAAATGATCGTGATTAAAACA
1 A-AAAAAGAAAAATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCA
* * * * * * * *
5300246 CGAGTCAAAAAGTGAAGAACGATCGAGATTAAATCGCAAGTG
64 TGAGTCAAAAAATGAA-AATGA-CTAGATTAAACCACGAGTC
* * ** ** * * * *** * *
5300288 AAAAAACAAAAATTACCGCGATTAAACCGTGAGTCGAAAGATGAAAAGGACGGGGATTAAATCGT
1 AAAAAAGAAAAATGATAG-GATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCAT
** * **
5300353 GAGTCAAAAAATGAAAACAACCTAAATTAAACCATAAGTC
65 GAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * * * ** **** *
5300393 AGAAAATG-AAAACGACCAGGATTAAACCACCAGTCAGAAAATGAAAACAATTGGGATTAAACTA
1 A-AAAAAGAAAAATGA-TAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCA
** *
5300457 CCCA-TCAAAAAAAGAAAAATGA-TAAGGATTAAACCACGAGTC
64 -TGAGTCAAAAAATG-AAAATGACT-A-GATTAAACCACGAGTC
* * * * *
5300499 AAAAAATGAAAAAAGATCACGATTAGACCACGAGTCAGAAAATGAAAATGACTATGATTAAACCA
1 AAAAAA-GAAAAATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCA
* * * *
5300564 TGAGTCAAAAAATCAAAATAATCCT-GATTAAGCCATGAGTC
64 TGAGTCAAAAAATGAAAATGA--CTAGATTAAACCACGAGTC
* ** * * ** *
5300605 AAAAAATG-AAAATGAGCCA-GATTAAACTGCAAGTCAAAAAATGGAAACAACCAGGATTAAACC
1 AAAAAA-GAAAAATGA--TAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACC
** ** * * * *
5300668 ACCAGTCAAAAAATGAAAACAACCAAAATTAAATCACGGGTC
63 ATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* ** * * * *
5300710 AGAAAATGAAAACAACA-AGGATTAAATCACGAATCAGAAAAATGAAAATGACCAGGATTAAATC
1 A-AAAAAGAAAA-ATGATAGGATTAAACCACGAGTCA-AAAAATGAAAATGACCATGATTAAACC
*** * * * ***
5300774 ATGAG-CTAGGGAA-CAAAAGTGA-TGGGAATTAAATCGTAAGTC
63 ATGAGTC-AAAAAATGAAAA-TGACT-AG-ATTAAACCACGAGTC
* ** * ** * **
5300816 AAAAAATG-AAAATGACCAAAATTAAATCATAAGTCAGAAACA--AAAACAACCGA-GATTAAAC
1 AAAAAA-GAAAAATGA-TAGGATTAAACCACGAGTCA-AAAAATGAAAATGACC-ATGATTAAAC
* * * *
5300877 CACGAGTCAAAAAATGAAAATGATCAAGATTAAACCATGAGTA
62 CATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * ** * *
5300920 AAAAAATGAGAACAATCG--A-GATTAAATCACAAGTCAAAAATTGAAAAACAACCATCACTAAA
1 AAAAAA-GA-AA-AAT-GATAGGATTAAACCACGAGTCAAAAAATG-AAAATGACCATGATTAAA
* * * * *
5300982 TCATGAGTCAGAGAAATGAAAATGATCGATATTAAATCAC-ATGTC
61 CCATGAGTCA-AAAAATGAAAATGA-CTAGATTAAACCACGA-GTC
* * * * * * * ** * *
5301027 AAAAATCGAAAACT-ACT-GAGAATAAATCATGAGTCAAAAACTCAAAACCACCGA-AACTAAAT
1 AAAAA-AGAAAAATGA-TAG-GATTAAACCACGAGTCAAAAAATGAAAATGACC-ATGATTAAA-
* * * * * * * * *
5301089 CACAT--GTTAGAGAACGAAAAATCAACGAAATTAAATCACGAGTT
61 C-CATGAGTCAAAAAATG-AAAAT-GACTAGATTAAACCACGAGTC
* * **** * *
5301133 AAAAAATG-AAAGTGATCGGGATTAAATTGTGAGTCAAAAAATGAAAATGACC-CGTATTAAACT
1 AAAAAA-GAAAAATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACCATG-ATTAAACC
* * * * * *
5301196 ACGAGTTAGAAAATAAAAAAGATCGAGATTAAACCACGAGTC
63 ATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * * *
5301238 AAAAAATGAAAACT-ATCGAGATTAAACCATGAGTTAAAAAAATGAAAATGACCAGGATTAAACC
1 AAAAAA-GAAAAATGATAG-GATTAAACCACGAG-TCAAAAAATGAAAATGACCATGATTAAACC
* * ** ** * * ** *
5301302 ACGAGTCAAAAAATGAATACAATCGGGTTTAAATCGTGAGTT
63 ATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * * ** * * * * *
5301344 AAGAAATGAAAACA--ATCGGGATTAAATCATGAGTCAGGAAATGACAACGACTAAGATTAAATC
1 AA-AAAAGAAAA-ATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACC
* * ** ** * *
5301407 ACGAGTC-AAAAATAAAAAATGATCGGGATTAAATTACTAGTG
63 ATGAGTCAAAAAAT-GAAAATGA-CTAGATTAAACCACGAGTC
* *
5301449 AAAAAATGAAAACA--ATAAGGATTAAACCACGAGTCAGAAATTGAAAATGACCGA-GATTAAAC
1 AAAAAA-GAAAA-ATGAT-AGGATTAAACCACGAGTCAAAAAATGAAAATGACC-ATGATTAAAC
* * * * *
5301511 CATTAG-CTAGAAAAAGGAAAACGATCGAGATTAAA-CATTGAGTC
62 CATGAGTC-A-AAAAATGAAAATGA-CTAGATTAAACCA-CGAGTC
* * * *** **
5301555 AGAAAATG-AAAACGATTGTGATTAAACCACGAGTCAAAAAATGAAAATGACTGGGATTAAAGTA
1 A-AAAAAGAAAAATGATAG-GATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCA
* * ** * *
5301619 CGAGTTAAAAAATGAAAAACAACTTGGATTAAACCATGAGTC
64 TGAGTCAAAAAATG-AAAATGAC-TAGATTAAACCACGAGTC
* * * * *
5301661 GGAAAATGAAAACAAG-TGGGATTAAA-CATTGAGTCAGAAAAA-GAAAATGACC-TAGATTAAA
1 -AAAAAAGAAAA-ATGATAGGATTAAACCA-CGAGTCA-AAAAATGAAAATGACCAT-GATTAAA
* * * * *
5301722 GCACGAG-CAAAAAAATGGAAACGACTAAGATTAAACCATGAGTC
61 CCATGAGTC-AAAAAATGAAAATGACT-AGATTAAACCACGAGTC
* * ** * ** *
5301766 ACAAAATG-GAAATGACCGGGATTAAACCACCAGTCAGAAAAA-GAAAAATGAATAGGATTAAAC
1 A-AAAAAGAAAAATGA-TAGGATTAAACCACGAGTCA-AAAAATG-AAAATGACCATGATTAAAC
* ** ** * * *
5301829 CGTGAGTCAGGAAATGAAAATGACCGGAATTAAGCTACGAGTT
62 CATGAGTCAAAAAATGAAAATGACTAG-ATTAAACCACGAGTC
* * * * * ****
5301872 AGAAAATG-AGAATGATA--A--AAA-TATGA---AAAAGA--AAAATGATTGGGATTAAACCAT
1 A-AAAAAGAAAAATGATAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCAT
* *** ** * *
5301926 GAGTCAGAAAATGAATGCGATCGGGTTTAAATCACGAGTC
65 GAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * * *
5301966 AAAAAATG-AAAACGATCGTGATAAAAACACGAGTCAAAAAATGAAGAATGACCGA-GATTAAAT
1 AAAAAA-GAAAAATGATAG-GATTAAACCACGAGTCAAAAAATGAA-AATGACC-ATGATTAAAC
* * ** ** *
5302029 CGTAAGTCAAAAAAATGAAAATGACCGCGATTAAACCGTGAGTT
62 CATGAGTC-AAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* * * ** ** **
5302073 AGAAGATG-AAAAGGACGGGGATTAAACCGTGAGTCAAAAAATGAAAACAACCCA-GATTAAACC
1 A-AAAAAGAAAAATGA-TAGGATTAAACCACGAGTCAAAAAATGAAAATGA-CCATGATTAAACC
* * * * * *
5302136 ATAAGTCAGAAAATGAAAATGATTGGGATTAAACTACCCA-TC
63 ATGAGTCAAAAAATGAAAATGACT-AGATTAAACCA-CGAGTC
* * * *
5302178 AAAAAAAGAAAAATGATAGGGATTCAACCACGAGTAAAAAAATGAAAAAGGACCACGATTAAACC
1 -AAAAAAGAAAAATGATA-GGATTAAACCACGAGTCAAAAAATG-AAAATGACCATGATTAAACC
* * * *
5302243 ACGAGTCAAAAAATGAAAATGATTGTGATTAAACCATGAGTC
63 ATGAGTCAAAAAATGAAAATGACT-AGATTAAACCACGAGTC
** * ** *
5302285 AAAAAATGAAAATACTCCTA--ATTAAGCCATTAGTCAAAAAATGAAAACGAGCCA-GATTAAA-
1 AAAAAA-GAAAA-A-TGATAGGATTAAACCACGAGTCAAAAAATGAAAATGA-CCATGATTAAAC
* * * *
5302346 C-TGCAAGTCAAAAAATGGAAACAACCAGGATTAAAGCACCGAAATTAAATCACGAGTT
62 CATG--AGTCAAAAAAT-G----AA--A--A-T---G-A-CTAGATTAAACCACGAGTC
* * *** * *
5302404 AAAAAATG-AAAATGTTTGGGATTAAACTGTGAGTCAAAAAAT-AAAATGACC-CGTATTAAACT
1 AAAAAA-GAAAAATG-ATAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATG-ATTAAACC
* * * * * *
5302466 ATGAGTTAGAAAATAAAAAAGATCGAGATTAAATCACGAGTC
63 ATGAGTCAAAAAATGAAAATGA-CTAGATTAAACCACGAGTC
* ** * * * * ** *
5302508 AGAAATA-AAAAATGACCGGGATTAAATCACTAGTCAAAAAGTGAAAACGATAAGGATTAAACCA
1 A-AAAAAGAAAAATGA-TAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCA
* * * *
5302572 TGAGTCAGAAAATGAAAATGGCCAAGATTAAACCACTAGAT-
64 TGAGTCAAAAAATGAAAAT-GACTAGATTAAACCACGAG-TC
* * * *
5302613 AGAAAAAGAAAAATGATTGAGATTAAA-CATTGAGTCAGAAAACGAAAA-G--CATTGGGATTAA
1 A-AAAAAGAAAAATGATAG-GATTAAACCA-CGAGTCAAAAAATGAAAATGACCA-T--GATTAA
*
5302674 ACCACGAGTCAAAAAATGAAAA
60 ACCATGAGTCAAAAAATGAAAA
5302696 CGATCAAAAA
Statistics
Matches: 2962, Mismatches: 809, Indels: 594
0.68 0.19 0.14
Matches are distributed among these distances:
91 4 0.00
92 35 0.01
93 25 0.01
94 104 0.04
95 5 0.00
96 8 0.00
97 8 0.00
98 3 0.00
99 5 0.00
100 21 0.01
101 11 0.00
102 51 0.02
103 29 0.01
104 300 0.10
105 816 0.28
106 1104 0.37
107 324 0.11
108 22 0.01
109 7 0.00
110 2 0.00
111 1 0.00
112 1 0.00
113 2 0.00
114 1 0.00
115 1 0.00
116 1 0.00
117 5 0.00
118 25 0.01
119 39 0.01
120 2 0.00
ACGTcount: A:0.51, C:0.13, G:0.17, T:0.19
Consensus pattern (103 bp):
AAAAAAGAAAAATGATAGGATTAAACCACGAGTCAAAAAATGAAAATGACCATGATTAAACCATG
AGTCAAAAAATGAAAATGACTAGATTAAACCACGAGTC
Found at i:5299230 original size:71 final size:71
Alignment explanation
Indices: 5299103--5299288 Score: 173
Period size: 71 Copynumber: 2.6 Consensus size: 71
5299093 AATGATCAAG
* * * * *
5299103 ATTAAATCGTGAGTCAAAAAATGAAAACAATCGAGATTAAATCACAAGTCAGAAAATGAAAAACA
1 ATTAAATCATGAGTCAGAAAATGAAAACAATCAAGATTAAATCAAAAGTCAGAAAATCAAAAACA
*
5299168 A-TCGTC
66 ACT-GAC
** *
5299174 ATTAAATCATGAGTCAGAGAAATGAAAATGATCAATATTAAATCAAAATGT-A-AAAATCAAAAA
1 ATTAAATCATGAGTCAGA-AAATGAAAACAATCAAGATTAAATCAAAA-GTCAGAAAATCAAAAA
* *
5299237 CTACTGAG
64 CAACTGAC
* * * *
5299245 AATAAATCATGAGTCAGAAAATCG-AAACCATCAAAACTAAATCA
1 ATTAAATCATGAGTCAGAAAAT-GAAAACAATCAAGATTAAATCA
5299289 CATGTCGGAG
Statistics
Matches: 95, Mismatches: 16, Indels: 9
0.79 0.13 0.08
Matches are distributed among these distances:
70 20 0.21
71 47 0.49
72 26 0.27
73 2 0.02
ACGTcount: A:0.53, C:0.13, G:0.12, T:0.21
Consensus pattern (71 bp):
ATTAAATCATGAGTCAGAAAATGAAAACAATCAAGATTAAATCAAAAGTCAGAAAATCAAAAACA
ACTGAC
Found at i:5299237 original size:107 final size:104
Alignment explanation
Indices: 5299045--5299271 Score: 226
Period size: 107 Copynumber: 2.1 Consensus size: 104
5299035 TTAAATCGTG
* *
5299045 AGTCAGAAAA-CAAAAACAACCGAGATTAAACCACGAGTCAAAAAAGAAAATGATCAAGATTAAA
1 AGTCAGAAAATGAAAAACAACCGACATTAAACCACGAGTCAAAAAAGAAAATGATCAAGATTAAA
*** * *
5299109 TCGTGAGTCAAAAAATGAAAACAA-TCGAGATTAAATCACA
66 TCAAAAGT-AAAAAATAAAAACAACT-GAGAATAAATCACA
* * * * * *
5299149 AGTCAGAAAATGAAAAACAATCGTCATTAAATCATGAGTCAGAGAAATGAAAATGATCAATATTA
1 AGTCAGAAAATGAAAAACAACCGACATTAAACCACGAGTCA-A-AAAAGAAAATGATCAAGATTA
* **
5299214 AATCAAAATGT-AAAAATCAAAAACTACTGAGAATAAATCATG
64 AATCAAAA-GTAAAAAAT-AAAAACAACTGAGAATAAATCACA
5299256 AGTCAGAAAATCGAAA
1 AGTCAGAAAAT-GAAA
5299272 CCATCAAAAC
Statistics
Matches: 100, Mismatches: 16, Indels: 10
0.79 0.13 0.08
Matches are distributed among these distances:
104 10 0.10
105 24 0.24
106 7 0.07
107 52 0.52
108 7 0.07
ACGTcount: A:0.54, C:0.13, G:0.14, T:0.19
Consensus pattern (104 bp):
AGTCAGAAAATGAAAAACAACCGACATTAAACCACGAGTCAAAAAAGAAAATGATCAAGATTAAA
TCAAAAGTAAAAAATAAAAACAACTGAGAATAAATCACA
Found at i:5299457 original size:69 final size:68
Alignment explanation
Indices: 5299327--5299477 Score: 187
Period size: 69 Copynumber: 2.2 Consensus size: 68
5299317 TTAAGTCACA
* * * * * *
5299327 AGTTAAAAAATGAAAATGACCGGGATTAAACTGAATCAAAAAATGAAAATGACCCATATTAAACT
1 AGTTAAAAAATGAAAAAGACCGAGATTAAACTGAATCAAAAAATGAAAACGACCAAGATTAAACC
5299392 ACG
66 ACG
* * *
5299395 AGTTAGAAAAT-AAAAAGACCGAGATTAAATCGTGAGTCAGAAAATGAAAACGACCAAGATTAAA
1 AGTTAAAAAATGAAAAAGACCGAGATTAAA-C-TGAATCAAAAAATGAAAACGACCAAGATTAAA
5299459 CCACG
64 CCACG
*
5299464 AGTCAAAAAATGAA
1 AGTTAAAAAATGAA
5299478 TACAATCGAG
Statistics
Matches: 69, Mismatches: 11, Indels: 4
0.82 0.13 0.05
Matches are distributed among these distances:
67 16 0.23
68 11 0.16
69 40 0.58
70 2 0.03
ACGTcount: A:0.52, C:0.13, G:0.17, T:0.18
Consensus pattern (68 bp):
AGTTAAAAAATGAAAAAGACCGAGATTAAACTGAATCAAAAAATGAAAACGACCAAGATTAAACC
ACG
Found at i:5301412 original size:176 final size:177
Alignment explanation
Indices: 5301221--5301812 Score: 465
Period size: 176 Copynumber: 3.4 Consensus size: 177
5301211 AAAAAGATCG
*
5301221 AGATTAAACCACGAGTCAAAAAATGAAAACT-ATCGAGATTAAACCA-TGAGTTAAAAAAATGAA
1 AGATTAAACCACGAGTCAAAAAATGAAAAATGATCGAGATTAAACCACT-AG-TAAAAAAATGAA
** * * * * * * * * *
5301284 AATGACCAGGATTAAACCACGAGTCAAAAAATGAATACAATCGGGTTTAAATCGTGAGTTA-AGA
64 AACAACAAGGATTAAACCACGAGTCAAAAAATGAAAACAACCGAGATTAAACCATGAGCTAGAAA
* * * *
5301348 AATGAAAACAATCGGGATTAAATCA-TGAGTCAGGAAATGACAACGACTA
129 AAGGAAAACAATCGAGATTAAA-CATTGAGTCAGAAAATGAAAACGACTA
* * * ** *
5301397 AGATTAAATCACGAGTC-AAAAATAAAAAATGATCGGGATTAAATTACTAGTGAAAAAATGAAAA
1 AGATTAAACCACGAGTCAAAAAATGAAAAATGATCGAGATTAAACCACTAGTAAAAAAATGAAAA
* * * ** *
5301461 CAATAAGGATTAAACCACGAGTCAGAAATTGAAAATGACCGAGATTAAACCATTAGCTAGAAAAA
66 CAACAAGGATTAAACCACGAGTCAAAAAATGAAAACAACCGAGATTAAACCATGAGCTAGAAAAA
* * *
5301526 GGAAAACGATCGAGATTAAACATTGAGTCAGAAAATGAAAACGATTG
131 GGAAAACAATCGAGATTAAACATTGAGTCAGAAAATGAAAACGACTA
* * ** * *
5301573 TGATTAAACCACGAGTCAAAAAATG-AAAATGA-CTGGGATTAAAGTACGAGTTAAAAAATGAAA
1 AGATTAAACCACGAGTCAAAAAATGAAAAATGATC-GAGATTAAACCACTAGTAAAAAAATG-AA
** * ** ** *
5301636 AACAACTTGGATTAAACCATGAGTCGGAAAATGAAAACAAGTGGGATTAAA-CATTGAG-TCAGA
64 AACAACAAGGATTAAACCACGAGTCAAAAAATGAAAACAACCGAGATTAAACCA-TGAGCT-AGA
** * * * * *
5301699 AAAA-GAAAATGACCTAGATTAAAGCA-CGAG-CAAAAAAATGGAAACGACTA
127 AAAAGGAAAACAATCGAGATTAAA-CATTGAGTC-AGAAAATGAAAACGACTA
* * * * * * *
5301749 AGATTAAACCATGAGTCACAAAATG-GAAATGACCGGGATTAAACCACCAGTCAGAAAAA-GAAA
1 AGATTAAACCACGAGTCAAAAAATGAAAAATGATCGAGATTAAACCACTAGT-AAAAAAATGAAA
5301812 A
65 A
5301813 ATGAATAGGA
Statistics
Matches: 337, Mismatches: 66, Indels: 27
0.78 0.15 0.06
Matches are distributed among these distances:
175 75 0.22
176 195 0.58
177 67 0.20
ACGTcount: A:0.50, C:0.13, G:0.19, T:0.19
Consensus pattern (177 bp):
AGATTAAACCACGAGTCAAAAAATGAAAAATGATCGAGATTAAACCACTAGTAAAAAAATGAAAA
CAACAAGGATTAAACCACGAGTCAAAAAATGAAAACAACCGAGATTAAACCATGAGCTAGAAAAA
GGAAAACAATCGAGATTAAACATTGAGTCAGAAAATGAAAACGACTA
Found at i:5301707 original size:71 final size:71
Alignment explanation
Indices: 5301539--5301707 Score: 184
Period size: 71 Copynumber: 2.4 Consensus size: 71
5301529 AAACGATCGA
* * *
5301539 GATTAAACATTGAGTCAGAAAATG-AAAACGATTGTGATTAAACCACGAGTCAAAAAATGAAAAT
1 GATTAAACATTGAGTCAGAAAAAGAAAAACAATTGTGATTAAACCACGAGTCAAAAAATGAAAAC
*
5301603 GACTGG
66 AACTGG
* * * * **
5301609 GATTAAA-GTACGAGTTA-AAAAATGAAAAACAACTTG-GATTAAACCATGAGTCGGAAAATGAA
1 GATTAAACAT-TGAGTCAGAAAAA-GAAAAACAA-TTGTGATTAAACCACGAGTCAAAAAATGAA
*
5301671 AACAAGTGG
63 AACAACTGG
5301680 GATTAAACATTGAGTCAGAAAAAGAAAA
1 GATTAAACATTGAGTCAGAAAAAGAAAA
5301708 TGACCTAGAT
Statistics
Matches: 79, Mismatches: 14, Indels: 11
0.76 0.13 0.11
Matches are distributed among these distances:
69 5 0.06
70 13 0.16
71 52 0.66
72 9 0.11
ACGTcount: A:0.50, C:0.10, G:0.20, T:0.20
Consensus pattern (71 bp):
GATTAAACATTGAGTCAGAAAAAGAAAAACAATTGTGATTAAACCACGAGTCAAAAAATGAAAAC
AACTGG
Found at i:5301754 original size:70 final size:70
Alignment explanation
Indices: 5301680--5301854 Score: 174
Period size: 71 Copynumber: 2.5 Consensus size: 70
5301670 AAACAAGTGG
* * * * *
5301680 GATTAAACATTGAGTCAGAAAAAGAAAATGACCTAGATTAAAGCACGAG-CAAAAAAATG-GAAA
1 GATTAAACA-TGAGTCAGAAAATGAAAATGACCGAGATTAAACCACCAGTCAAAAAAA-GAAAAA
*
5301743 CGACTAA
64 CGAATAA
* * * * *
5301750 GATTAAACCATGAGTCACAAAATGGAAATGACCGGGATTAAACCACCAGTCAGAAAAAGAAAAAT
1 GATTAAA-CATGAGTCAGAAAATGAAAATGACCGAGATTAAACCACCAGTCAAAAAAAGAAAAAC
*
5301815 GAATAG
65 GAATAA
* *
5301821 GATTAAACCGTGAGTCAGGAAATGAAAATGACCG
1 GATTAAA-CATGAGTCAGAAAATGAAAATGACCG
5301855 GAATTAAGCT
Statistics
Matches: 86, Mismatches: 16, Indels: 5
0.80 0.15 0.05
Matches are distributed among these distances:
70 40 0.47
71 46 0.53
ACGTcount: A:0.49, C:0.14, G:0.21, T:0.16
Consensus pattern (70 bp):
GATTAAACATGAGTCAGAAAATGAAAATGACCGAGATTAAACCACCAGTCAAAAAAAGAAAAACG
AATAA
Found at i:5302039 original size:71 final size:70
Alignment explanation
Indices: 5301962--5302120 Score: 165
Period size: 72 Copynumber: 2.2 Consensus size: 70
5301952 TTAAATCACG
* * *
5301962 AGTCAAAAAATGAAAACGATCGTGATAAAAACACGAGTCAAAAAATGAAGAATGACCGAGATTAA
1 AGTCAAAAAATGAAAACGACCGCGATAAAAACACGAGTCAAAAAATGAA-AAGGACCGAGATTAA
*
5302027 ATCGTA
65 ACCGTA
* * * ** * * * * *
5302033 AGTCAAAAAAATGAAAATGACCGCGATTAAACCGTGAGTTAGAAGATGAAAAGGACGGGGATTAA
1 AGTC-AAAAAATGAAAACGACCGCGATAAAAACACGAGTCAAAAAATGAAAAGGACCGAGATTAA
*
5302098 ACCGTG
65 ACCGTA
5302104 AGTCAAAAAATGAAAAC
1 AGTCAAAAAATGAAAAC
5302121 AACCCAGATT
Statistics
Matches: 71, Mismatches: 16, Indels: 3
0.79 0.18 0.03
Matches are distributed among these distances:
70 12 0.17
71 24 0.34
72 35 0.49
ACGTcount: A:0.50, C:0.13, G:0.21, T:0.16
Consensus pattern (70 bp):
AGTCAAAAAATGAAAACGACCGCGATAAAAACACGAGTCAAAAAATGAAAAGGACCGAGATTAAA
CCGTA
Found at i:5302359 original size:177 final size:176
Alignment explanation
Indices: 5302037--5302360 Score: 384
Period size: 177 Copynumber: 1.8 Consensus size: 176
5302027 ATCGTAAGTC
* * ** * * * *
5302037 AAAAAAATGAAAATGACCGCGATTAAACCGTGAGTTAGAAGATGAAAAGGACGGGGATTAAACCG
1 AAAAAAATGAAAAGGACCACGATTAAACCACGAGTCAAAAAATGAAAAGGACGGGGATTAAACCA
* * ****
5302102 TGAGTCAAAAAATGAAAACAACCCAGATTAAACCATAAGTCAGAAAATGAAAATGATTGGGATTA
66 TGAGTCAAAAAATGAAAACAACCCAGATTAAACCATAAGTCAAAAAATGAAAACGAGCCAGATTA
*
5302167 AACTACCCATCAAAAAAAGAAAAATGATAGGGATTCAACCACGAGT
131 AACTACCAATCAAAAAAAGAAAAATGATAGGGATTCAACCACGAGT
* ** *
5302213 AAAAAAATGAAAAAGGACCACGATTAAACCACGAGTCAAAAAATGAAAATGATTGTGATTAAACC
1 AAAAAAATG-AAAAGGACCACGATTAAACCACGAGTCAAAAAATGAAAAGGACGGGGATTAAACC
* * *
5302278 ATGAGTCAAAAAATGAAAA-TACTCCTA-ATTAAGCCATTAGTCAAAAAATGAAAACGAGCCAGA
65 ATGAGTCAAAAAATGAAAACAAC-CC-AGATTAAACCATAAGTCAAAAAATGAAAACGAGCCAGA
*
5302341 TTAAACT-GCAAGTCAAAAAA
128 TTAAACTACCAA-TCAAAAAA
5302361 TGGAAACAAC
Statistics
Matches: 121, Mismatches: 23, Indels: 7
0.80 0.15 0.05
Matches are distributed among these distances:
176 13 0.11
177 107 0.88
178 1 0.01
ACGTcount: A:0.51, C:0.15, G:0.17, T:0.18
Consensus pattern (176 bp):
AAAAAAATGAAAAGGACCACGATTAAACCACGAGTCAAAAAATGAAAAGGACGGGGATTAAACCA
TGAGTCAAAAAATGAAAACAACCCAGATTAAACCATAAGTCAAAAAATGAAAACGAGCCAGATTA
AACTACCAATCAAAAAAAGAAAAATGATAGGGATTCAACCACGAGT
Found at i:5302704 original size:17 final size:18
Alignment explanation
Indices: 5302677--5302710 Score: 61
Period size: 17 Copynumber: 1.9 Consensus size: 18
5302667 GGATTAAACC
5302677 ACGAGTCAAAAAATGAAA
1 ACGAGTCAAAAAATGAAA
5302695 ACGA-TCAAAAAATGAA
1 ACGAGTCAAAAAATGAA
5302711 CAAAAAATGA
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
17 12 0.75
18 4 0.25
ACGTcount: A:0.62, C:0.12, G:0.15, T:0.12
Consensus pattern (18 bp):
ACGAGTCAAAAAATGAAA
Found at i:5304598 original size:71 final size:67
Alignment explanation
Indices: 5304421--5304627 Score: 191
Period size: 71 Copynumber: 2.9 Consensus size: 67
5304411 AGGAAATGAC
* *
5304421 AACGACTGAGATTAAATCACGAGTCAGAAATAAAAAATGACCGGGATTAAATCACTAGTCA-AAA
1 AACGA-TGAGATTAAA-CACGAGTCAGAAA-AGAAAATGACCGGGATTAAACCACTAGT-AGAAA
*
5304485 AATGAA
62 AAGGAA
* * * * *
5304491 AACGATAAGGATTTAACCAGGAGTCAAAAAATGAAAATGACCGAGATTAAACCACTAGCTAGAAA
1 AACGATGA-GA-TTAAACACGAGTCAGAAAA-GAAAATGACCGGGATTAAACCACTAG-TAGAAA
5304556 AAGGAA
62 AAGGAA
* ** *
5304562 AACGATTGAGATTAAACATTGAGTCAGAAAACGAAAATGATTGGGATTAAACCACGAGTTAGAAA
1 AACGA-TGAGATTAAACA-CGAGTCAGAAAA-GAAAATGACCGGGATTAAACCACTAG-TAGAAA
5304627 A
62 A
5304628 TGAAAATGAT
Statistics
Matches: 112, Mismatches: 18, Indels: 13
0.78 0.13 0.09
Matches are distributed among these distances:
69 3 0.03
70 48 0.43
71 59 0.53
72 2 0.02
ACGTcount: A:0.49, C:0.13, G:0.19, T:0.18
Consensus pattern (67 bp):
AACGATGAGATTAAACACGAGTCAGAAAAGAAAATGACCGGGATTAAACCACTAGTAGAAAAAGG
AA
Found at i:5304736 original size:123 final size:123
Alignment explanation
Indices: 5304514--5304773 Score: 405
Period size: 123 Copynumber: 2.1 Consensus size: 123
5304504 TAACCAGGAG
* **
5304514 TCAAAAAATGAAAATGACCGAGATTAAACCACTAGCTAGAAAAAGGAAAACGATTGAGATTAAAC
1 TCAAAAAATGAAAATGACCGAGATTAAACCACTAGCCAGAAAAAGGAAAACGACCGAGATTAAAC
* * * *
5304579 ATTGAGTCAGAAAACGAAAATGATTGGGATTAAACCACGAGTTAGAAAA-TGAAAATGA
66 ATTGAGTCAGAAAACGAAAACGATTGAGATTAAACCACGAGTCA-AAAATTGAAAACGA
** *
5304637 TGGAAAAATGAAAATGACCGAGATTAAACCACTAGCCAGAAAAAGGAAAATGACCGAGATTAAAC
1 TCAAAAAATGAAAATGACCGAGATTAAACCACTAGCCAGAAAAAGGAAAACGACCGAGATTAAAC
*
5304702 ATTGAGTCAGAAAACGAAAACGATTGATATTAAACCACGAGTCAAAAATTGAAAACGA
66 ATTGAGTCAGAAAACGAAAACGATTGAGATTAAACCACGAGTCAAAAATTGAAAACGA
5304760 TCAAAAAATGAAAA
1 TCAAAAAATGAAAA
5304774 AAAAAATGAT
Statistics
Matches: 123, Mismatches: 13, Indels: 2
0.89 0.09 0.01
Matches are distributed among these distances:
122 4 0.03
123 119 0.97
ACGTcount: A:0.52, C:0.13, G:0.18, T:0.17
Consensus pattern (123 bp):
TCAAAAAATGAAAATGACCGAGATTAAACCACTAGCCAGAAAAAGGAAAACGACCGAGATTAAAC
ATTGAGTCAGAAAACGAAAACGATTGAGATTAAACCACGAGTCAAAAATTGAAAACGA
Found at i:5304774 original size:18 final size:18
Alignment explanation
Indices: 5304738--5304773 Score: 56
Period size: 17 Copynumber: 2.1 Consensus size: 18
5304728 ATATTAAACC
*
5304738 ACGAGTCAAAAATTGAAA
1 ACGAGTCAAAAAATGAAA
5304756 ACGA-TCAAAAAATGAAA
1 ACGAGTCAAAAAATGAAA
5304773 A
1 A
5304774 AAAAAATGAT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
17 13 0.76
18 4 0.24
ACGTcount: A:0.61, C:0.11, G:0.14, T:0.14
Consensus pattern (18 bp):
ACGAGTCAAAAAATGAAA
Found at i:5306738 original size:18 final size:18
Alignment explanation
Indices: 5306702--5306737 Score: 65
Period size: 17 Copynumber: 2.1 Consensus size: 18
5306692 GGATTAAACC
5306702 ACGAGTCAAAAAATGAAA
1 ACGAGTCAAAAAATGAAA
5306720 ACGA-TCAAAAAATGAAA
1 ACGAGTCAAAAAATGAAA
5306737 A
1 A
5306738 AAAAATCATC
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
17 14 0.78
18 4 0.22
ACGTcount: A:0.64, C:0.11, G:0.14, T:0.11
Consensus pattern (18 bp):
ACGAGTCAAAAAATGAAA
Found at i:5310116 original size:106 final size:106
Alignment explanation
Indices: 5310005--5310209 Score: 245
Period size: 106 Copynumber: 1.9 Consensus size: 106
5309995 GTCAGAGAAC
* * * * *
5310005 AAAAAATGACCGAAATTAAATCAG-GAGTTAAAAAATGGAAATGAT-CGAGATTAAACTATGAGT
1 AAAAAA-GACCGAAATTAAA-CAGCGAGTCAAAAAATGAAAACG-TCCGAGATTAAACCATAAGT
* * *
5310068 CAAAAAAATGAAAATGACTC-GTATTAAACTACGAGTTAGAAAAT
63 CAAAAAAATGAAAACGA-TCAGGATTAAACCACGAGTTAGAAAAT
* * * *
5310112 AAAAAAGATCGAGATTAAACCGCGAGTCAGAAAATGAAAACGTCCGAGATTAAACCATAAGTCAA
1 AAAAAAGACCGAAATTAAACAGCGAGTCAAAAAATGAAAACGTCCGAGATTAAACCATAAGTCAA
5310177 AAAAATGAAAACGATCAGGATTAAACCACGAGT
66 AAAAATGAAAACGATCAGGATTAAACCACGAGT
5310210 CAAAAAATGA
Statistics
Matches: 83, Mismatches: 12, Indels: 7
0.81 0.12 0.07
Matches are distributed among these distances:
105 5 0.06
106 72 0.87
107 6 0.07
ACGTcount: A:0.51, C:0.13, G:0.18, T:0.19
Consensus pattern (106 bp):
AAAAAAGACCGAAATTAAACAGCGAGTCAAAAAATGAAAACGTCCGAGATTAAACCATAAGTCAA
AAAAATGAAAACGATCAGGATTAAACCACGAGTTAGAAAAT
Found at i:5310244 original size:106 final size:106
Alignment explanation
Indices: 5310050--5310361 Score: 244
Period size: 106 Copynumber: 3.0 Consensus size: 106
5310040 TGGAAATGAT
* * * * * * *
5310050 CGAGATTAAACTATGAGTCAAAAAAATGAAAATGACTCGTATTAAACTACGAGTTAGAAAATAAA
1 CGAGATTAAACCATAAGTCAAAAAAATGAAAACGACTCGGATTAAACCACGAGTCAAAAAATAAA
*
5310115 AAAGATCGAGATTAAACCGCGAGTC-AGAAAATGAAAACGTC
66 AAAGATCGAGATTAAACCACGAGTCAAG-AAATGAAAACGTC
5310156 CGAGATTAAACCATAAGTCAAAAAAATGAAAACGA-TCAGGATTAAACCACGAGTCAAAAAATGA
1 CGAGATTAAACCATAAGTCAAAAAAATGAAAACGACTC-GGATTAAACCACGAGTCAAAAAAT-A
* * * * * * **
5310220 ATACA-ATCGGGTTTAAATCACGAGTTAAGAAATGAAAAAAATC
64 AAAAAGATCGAGATTAAACCACGAGTCAAGAAATG-AAAACGTC
* * * * * * ** *
5310263 AG-GATTAAATCATGAGTC-AAGAAATGACAACGACT-GAGATGAAATTACGAGTC-AGAAATAA
1 CGAGATTAAACCATAAGTCAAAAAAATGAAAACGACTCG-GATTAAACCACGAGTCAAAAAATAA
* * * * *
5310324 AAAATGACCGGGATTAAATCACTAGTCAA-AAATTAAAA
65 AAAA-GATCGAGATTAAACCACGAGTCAAGAAATGAAAA
5310362 ACGATAAGGA
Statistics
Matches: 166, Mismatches: 32, Indels: 19
0.76 0.15 0.09
Matches are distributed among these distances:
103 8 0.05
104 10 0.06
105 47 0.28
106 88 0.53
107 13 0.08
ACGTcount: A:0.50, C:0.13, G:0.17, T:0.20
Consensus pattern (106 bp):
CGAGATTAAACCATAAGTCAAAAAAATGAAAACGACTCGGATTAAACCACGAGTCAAAAAATAAA
AAAGATCGAGATTAAACCACGAGTCAAGAAATGAAAACGTC
Found at i:5311528 original size:139 final size:141
Alignment explanation
Indices: 5311097--5311529 Score: 362
Period size: 139 Copynumber: 3.1 Consensus size: 141
5311087 TTAAAACATG
* * * * *
5311097 AGTCAAAAAATGAAAACAACCCA-GATTAAACCACAAGTCAGAAAATGAAAAA-GACCAGGATTA
1 AGTCAAAAAATGGAAACAA-CCAGGATTAAACCACCAGTCAAAAAATAAAAAACGACCACGATTA
* ** ** * *
5311160 AACCACAAGTCAGGAAATGAAAA-AGA-CCAGGATTAAACCACAAGTCAGGAAATGAAAACGA-C
65 AACCACGAGTCAAAAAATGAAAATA-ATCCA-GATTAAACCATGAGTCAGAAAATGAAAATGAGC
** * **
5311222 TGGGATTAAAATACCA
128 -CAGAATAAACCA-CA
* * * ** * * *
5311238 A-TCAAAAAAAGAAAAAAGATAAGGATTAAACCACGAGTCAAAAAATTAAAAAGGACCACGATTA
1 AGTCAAAAAATGGAAACA-ACCAGGATTAAACCACCAGTCAAAAAATAAAAAACGACCACGATTA
* *
5311302 GACCACGAGTCAAAAAATGAAAATAATCCTGATTAAACCATGAGTCAGAAAATGAAAATGAGCCA
65 AACCACGAGTCAAAAAATGAAAATAATCCAGATTAAACCATGAGTCAGAAAATGAAAATGAGCCA
* * *
5311367 GATTAAATCGCA
130 GAATAAACCACA
* *
5311379 AGTCAAAAAATGGAAACAACCAGGATTAAACCACCAGT-AAAAAA-AAAAAACGATCAGGATTAA
1 AGTCAAAAAATGGAAACAACCAGGATTAAACCACCAGTCAAAAAATAAAAAACGACCACGATTAA
* * * * * * * *
5311442 ACCATGGGTCAGAAAATGAAAATGATCGAGATTAAACTATGAGTGAGAAAATGAAAATGA-CTGA
66 ACCACGAGTCAAAAAATGAAAATAATCCAGATTAAACCATGAGTCAGAAAATGAAAATGAGC-CA
*
5311506 GAATAAACCACG
130 GAATAAACCACA
*
5311518 AGTCATAAAATG
1 AGTCAAAAAATG
5311530 AAAATGCAAG
Statistics
Matches: 237, Mismatches: 47, Indels: 18
0.78 0.16 0.06
Matches are distributed among these distances:
138 1 0.00
139 86 0.36
140 21 0.09
141 48 0.20
142 77 0.32
143 4 0.02
ACGTcount: A:0.52, C:0.15, G:0.17, T:0.15
Consensus pattern (141 bp):
AGTCAAAAAATGGAAACAACCAGGATTAAACCACCAGTCAAAAAATAAAAAACGACCACGATTAA
ACCACGAGTCAAAAAATGAAAATAATCCAGATTAAACCATGAGTCAGAAAATGAAAATGAGCCAG
AATAAACCACA
Found at i:5313561 original size:373 final size:372
Alignment explanation
Indices: 5313019--5313709 Score: 849
Period size: 373 Copynumber: 1.9 Consensus size: 372
5313009 TTTAAATCGC
* * * * * *
5313019 GAGTTAAGAAATGAAAACAATCGGGATTAAATCATCAGTCAAGAAATGACAACGACTGAGATTAA
1 GAGTTAAAAAATGAAAACAACCGGGATTAAACCATCAGTCAAAAAATGAAAACAACTGAGATTAA
* * * * *
5313084 ATCATGAGTCAAAAATAAAAAATGATCGGGATTAAATCACTAGTCAAAAAATGAAAACGATAAGG
66 ATCATGAGTCAAAAATAAAAAATGACCGAGATTAAAGCACGAGCCAAAAAATGAAAACGATAAGG
* * *
5313149 ATTAAACCATGAGTCAGAAAATGAAAATGATCGAGATTAAACCACTAGCTAGAAAAAGAAAAACG
131 ATTAAACCATGAGTCAGAAAATGAAAATGACCAAGATTAAACCACCAGCTAGAAAAAGAAAAACG
* * * *
5313214 -ATCAAGTTTAAACATTGAGTCAGAAAATGAAAATAA-TCGGGATTAAACCATGAGTCAGAAAAT
196 AAT-AAGATTAAACAGTGAGTCAGAAAATGAAAATAACT-GGAATTAAACCACGAGTCAGAAAAT
** * *
5313277 GAA-AACGATCGAAAAATGAAATAAAAATGATCGGGACTAAACCACGAGTTAGAAAATGAATGCG
259 -AAGAACGATAAAAAAATGAAAAAAAAATGATCGGGACTAAACCACGAGTCAGAAAATGAATGCG
5313341 ACCAGTTTGAATGATGAGTCAAGAAATAAAAATGACTGGGATTAAAGTAT
323 ACCAGTTTGAATGATGAGTCAAGAAATAAAAATGACTGGGATTAAAGTAT
* * *
5313391 GAGTTAAAAAATGAAAAACAACCTGGATTAAACCA-CGAGTCAAAAAATGAAAACAAGTGGGATT
1 GAGTTAAAAAATG-AAAACAACCGGGATTAAACCATC-AGTCAAAAAATGAAAACAACTGAGATT
* * * *
5313455 AAA-CATTGAGTTAGAAAA-AGAAAATGACCTAGATTAAAGCACGAGCCAGAAAAT-AGAAACGA
64 AAATCA-TGAGTCA-AAAATAAAAAATGACCGAGATTAAAGCACGAGCCAAAAAATGA-AAACGA
* * * *
5313517 CTAA-TATTAAACCATGAGTTAGAAAATGGAAATGACCAAGATTAAACCACCAGTTAGAAAAAGA
126 -TAAGGATTAAACCATGAGTCAGAAAATGAAAATGACCAAGATTAAACCACCAGCTAGAAAAAGA
* * * * * * * *
5313581 CAAATGAATAGGATTAAACCGTGAGTCAGAAAATGAAAATGACTGGAATTAAGCTACGAGTTAGA
190 AAAACGAATAAGATTAAACAGTGAGTCAGAAAATGAAAATAACTGGAATTAAACCACGAGTCAGA
* * *
5313646 AAATAAGAACGATAAAAAAATGAAAAAAAAATGATTGGGATTAAACCATGAGTCAGAAAATGAA
255 AAATAAGAACGATAAAAAAATGAAAAAAAAATGATCGGGACTAAACCACGAGTCAGAAAATGAA
5313710 AACGATCGAT
Statistics
Matches: 266, Mismatches: 44, Indels: 17
0.81 0.13 0.05
Matches are distributed among these distances:
372 18 0.07
373 238 0.89
374 10 0.04
ACGTcount: A:0.50, C:0.11, G:0.19, T:0.19
Consensus pattern (372 bp):
GAGTTAAAAAATGAAAACAACCGGGATTAAACCATCAGTCAAAAAATGAAAACAACTGAGATTAA
ATCATGAGTCAAAAATAAAAAATGACCGAGATTAAAGCACGAGCCAAAAAATGAAAACGATAAGG
ATTAAACCATGAGTCAGAAAATGAAAATGACCAAGATTAAACCACCAGCTAGAAAAAGAAAAACG
AATAAGATTAAACAGTGAGTCAGAAAATGAAAATAACTGGAATTAAACCACGAGTCAGAAAATAA
GAACGATAAAAAAATGAAAAAAAAATGATCGGGACTAAACCACGAGTCAGAAAATGAATGCGACC
AGTTTGAATGATGAGTCAAGAAATAAAAATGACTGGGATTAAAGTAT
Found at i:5317443 original size:139 final size:140
Alignment explanation
Indices: 5317175--5317448 Score: 301
Period size: 139 Copynumber: 2.0 Consensus size: 140
5317165 AAAAACAACC
* *
5317175 AAAATTAAATCACGAGTCGAAAAATGAAAACAACAAGGATTAAATCACGAATCAAAAAAATGAAA
1 AAAATTAAATCACGAGTCGAAAAATGAAAACAACAAGGATTAAACCACGAAGCAAAAAAATGAAA
* * *** * ** *
5317240 ATGACGAGGATTAAATCATGAGTCAGGGAACAAAAGCGATGGGAATAAACCGTAAGTTAAAAAAT
66 ATGACGAAGATTAAACCATGAGTCAAAAAACAAAAGCGATGAGAATAAACCACAAGTCAAAAAAT
5317305 GAAAATGACA
131 GAAAATGACA
*
5317315 AAAATTAAA-CACGAGTC-AAAAA-GCAAAAACAACCAA-GATTAAACCACG-AGCCAAAAAATG
1 AAAATTAAATCACGAGTCGAAAAATG--AAAACAA-CAAGGATTAAACCACGAAGCAAAAAAATG
* * *
5317375 AAAATGATC-AAGATTAAACCATGAGTCAAAAAATGAAAA-CGATCGAGATTAAATCACAAGTCA
63 AAAATGA-CGAAGATTAAACCATGAGTCAAAAAA-CAAAAGCGAT-GAGAATAAACCACAAGTCA
*
5317438 GAAAATGAAAA
125 AAAAATGAAAA
5317449 ACAACCGTCG
Statistics
Matches: 112, Mismatches: 16, Indels: 13
0.79 0.11 0.09
Matches are distributed among these distances:
137 1 0.01
138 45 0.40
139 54 0.48
140 12 0.11
ACGTcount: A:0.55, C:0.14, G:0.16, T:0.15
Consensus pattern (140 bp):
AAAATTAAATCACGAGTCGAAAAATGAAAACAACAAGGATTAAACCACGAAGCAAAAAAATGAAA
ATGACGAAGATTAAACCATGAGTCAAAAAACAAAAGCGATGAGAATAAACCACAAGTCAAAAAAT
GAAAATGACA
Found at i:5317665 original size:71 final size:70
Alignment explanation
Indices: 5317588--5317732 Score: 159
Period size: 71 Copynumber: 2.1 Consensus size: 70
5317578 CAGAGAACAA
* * * * * *
5317588 AAAATGA-TCAAAATTAAA-TCAGGAGTTAAAAAATGAAAATGACCGGGATTAAACTGTGAGTCA
1 AAAATGACTC-AAATTAAACT-ACGAGTTAAAAAATAAAAAAGACCGAGATTAAACCGCGAGTC-
5317651 AAAAAATG
63 AAAAAATG
** * *
5317659 AAAATGACTCGTATTAAACTACGAGTTAGAAAATAAAAAAGACCGAGATTAAACCGCGAGTCAGA
1 AAAATGACTCAAATTAAACTACGAGTTAAAAAATAAAAAAGACCGAGATTAAACCGCGAGTCAAA
5317724 AAATG
66 AAATG
5317729 AAAA
1 AAAA
5317733 CGTCCGAGAT
Statistics
Matches: 62, Mismatches: 10, Indels: 5
0.81 0.13 0.06
Matches are distributed among these distances:
70 11 0.18
71 48 0.77
72 3 0.05
ACGTcount: A:0.52, C:0.11, G:0.18, T:0.19
Consensus pattern (70 bp):
AAAATGACTCAAATTAAACTACGAGTTAAAAAATAAAAAAGACCGAGATTAAACCGCGAGTCAAA
AAATG
Found at i:5317697 original size:106 final size:107
Alignment explanation
Indices: 5317586--5317791 Score: 229
Period size: 106 Copynumber: 1.9 Consensus size: 107
5317576 GTCAGAGAAC
* * * * ** *
5317586 AAAAAATGATCAAAATTAAATCAG-GAGTTAAAAAATGAAAATGACCGGGATTAAACTGTGAGTC
1 AAAAAA-GACCAAAATTAAA-CAGCGAGTCAAAAAATGAAAACGACCGAGATTAAACCATAAGTC
* * *
5317650 -AAAAAAATGAAAATGACTC-GTATTAAACTACGAGTTAGAAAAT
64 AAAAAAAATGAAAACGA-TCAGGATTAAACCACGAGTTAGAAAAT
* * * * *
5317693 AAAAAAGACCGAGATTAAACCGCGAGTCAGAAAATGAAAACGTCCGAGATTAAACCATAAGTCAA
1 AAAAAAGACCAAAATTAAACAGCGAGTCAAAAAATGAAAACGACCGAGATTAAACCATAAGTCAA
5317758 AAAAAATGAAAACGATCAGGATTAAACCACGAGT
66 AAAAAATGAAAACGATCAGGATTAAACCACGAGT
5317792 CAAAAAATGA
Statistics
Matches: 81, Mismatches: 15, Indels: 6
0.79 0.15 0.06
Matches are distributed among these distances:
105 2 0.02
106 44 0.54
107 35 0.43
ACGTcount: A:0.51, C:0.13, G:0.17, T:0.18
Consensus pattern (107 bp):
AAAAAAGACCAAAATTAAACAGCGAGTCAAAAAATGAAAACGACCGAGATTAAACCATAAGTCAA
AAAAAATGAAAACGATCAGGATTAAACCACGAGTTAGAAAAT
Found at i:5317818 original size:72 final size:70
Alignment explanation
Indices: 5317705--5317863 Score: 158
Period size: 72 Copynumber: 2.2 Consensus size: 70
5317695 AAAAGACCGA
* * * *
5317705 GATTAAACCGCGAGTCAGAAAATGAAAACGTCCGAGATTAAACCATAAGTCAAAAAAAATGAAAA
1 GATTAAACCACGAGTCAAAAAATGAAAACATCCGAGATTAAACCACAAGT--AAAAAAATGAAAA
*
5317770 CGATCAG
64 CAATCAG
* * * * * * *
5317777 GATTAAACCACGAGTCAAAAAATGAATACAAT-CGGGTTTAAATCACGAGTTAAGAAATGAAAAC
1 GATTAAACCACGAGTCAAAAAATGAAAAC-ATCCGAGATTAAACCACAAGTAAAAAAATGAAAAC
5317841 AATCAG
65 AATCAG
* *
5317847 GATTAAATCATGAGTCA
1 GATTAAACCACGAGTCA
5317864 GGAAATGACA
Statistics
Matches: 72, Mismatches: 14, Indels: 4
0.80 0.16 0.04
Matches are distributed among these distances:
70 32 0.44
72 39 0.54
73 1 0.01
ACGTcount: A:0.48, C:0.15, G:0.18, T:0.19
Consensus pattern (70 bp):
GATTAAACCACGAGTCAAAAAATGAAAACATCCGAGATTAAACCACAAGTAAAAAAATGAAAACA
ATCAG
Found at i:5318858 original size:177 final size:173
Alignment explanation
Indices: 5318665--5319077 Score: 434
Period size: 177 Copynumber: 2.4 Consensus size: 173
5318655 AAACGACGGG
* * *
5318665 GATTAAACCGTGAGTCAAAAAATGAAAACAACCCAGATTAAACCACAAGTCAGAAAATGAAAAAG
1 GATTAAACCATGAGTCAAAAAATGAAAATAACCCAGATTAAACCACGAGTCAGAAAATGAAAAAG
* * * *** *
5318730 A-CTAAGATTAAACTACAAGTCAGAAAATGAAAACGATTGGGATTAAAATACCAATAAAAAAAAG
66 AGC-AAGATTAAACCACAAGTCAAAAAATGAAAACAACCAGGATTAAAACACCAAT--AAAAAA-
5318794 AAAAAAGATAAGGATTAAACCATGAGTCAAAAAATTAAAAAGGA-CCA
127 AAAAAAGATAAGGATTAAACCATGAGTCAAAAAA-TAAAAAGGATCCA
* * * * * * *
5318841 CGATTAGACCATGAGTCAAAAAATAAAAATAATCCTGATTAAGCCATGAGTCAGAAAATGAAAAC
1 -GATTAAACCATGAGTCAAAAAATGAAAATAACCCAGATTAAACCACGAGTCAGAAAATGAAAAA
* * * * *
5318906 GAGCCAGATTAAACCACAAGTCAAAAAATGGAAACAACCAGGATTAAACCACCAGTCAAAAAAAA
65 GAGCAAGATTAAACCACAAGTCAAAAAATGAAAACAACCAGGATTAAAACACCAATAAAAAAAAA
* * * * * *
5318971 AACGATCAGGATTAAACCATGGGTCAAAAAATGAAAATGATCGA
130 AAAGATAAGGATTAAACCATGAGTCAAAAAATAAAAAGGATCCA
* * * * ** * *
5319015 GATTAAACTATGAGTGAGAAAATGAAAATGACTGAGAATAAACCACGAGTCATAAAATGAAAA
1 GATTAAACCATGAGTCAAAAAATGAAAATAACCCAGATTAAACCACGAGTCAGAAAATGAAAA
5319078 TGCGAGGGAT
Statistics
Matches: 192, Mismatches: 42, Indels: 8
0.79 0.17 0.03
Matches are distributed among these distances:
173 56 0.29
174 33 0.17
175 5 0.03
177 97 0.51
178 1 0.01
ACGTcount: A:0.53, C:0.14, G:0.16, T:0.16
Consensus pattern (173 bp):
GATTAAACCATGAGTCAAAAAATGAAAATAACCCAGATTAAACCACGAGTCAGAAAATGAAAAAG
AGCAAGATTAAACCACAAGTCAAAAAATGAAAACAACCAGGATTAAAACACCAATAAAAAAAAAA
AAGATAAGGATTAAACCATGAGTCAAAAAATAAAAAGGATCCA
Found at i:5319089 original size:138 final size:140
Alignment explanation
Indices: 5318804--5319073 Score: 330
Period size: 138 Copynumber: 1.9 Consensus size: 140
5318794 AAAAAAGATA
** * *
5318804 AGGATTAAACCATGAGTCAAAAAATTAAAAAGGACCACGATTAGACCATGAGTCAAAAAATAAAA
1 AGGATTAAACCACCAGTCAAAAAA-TAAAAACGACCACGATTAAACCATGAGTCAAAAAATAAAA
* * *
5318869 ATAATCCTGATTAAGCCATGAGTCAGAAAATGAAAACGAGCCAGATTAAACCACAAGTCAAAAAA
65 ATAATCCAGATTAAACCATGAGTCAGAAAATGAAAACGAGCCAGAATAAACCACAAGTCAAAAAA
5318934 TGGAAACAACC
130 TGGAAACAACC
* * * *
5318945 AGGATTAAACCACCAGTC-AAAAA-AAAAACGATCAGGATTAAACCATGGGTCAAAAAATGAAAA
1 AGGATTAAACCACCAGTCAAAAAATAAAAACGACCACGATTAAACCATGAGTCAAAAAATAAAAA
* * * * * * * *
5319008 TGATCGAGATTAAACTATGAGTGAGAAAATGAAAATGA-CTGAGAATAAACCACGAGTCATAAAA
66 TAATCCAGATTAAACCATGAGTCAGAAAATGAAAACGAGC-CAGAATAAACCACAAGTCAAAAAA
5319072 TG
130 TG
5319074 AAAATGCGAG
Statistics
Matches: 109, Mismatches: 19, Indels: 5
0.82 0.14 0.04
Matches are distributed among these distances:
137 1 0.01
138 87 0.80
140 5 0.05
141 16 0.15
ACGTcount: A:0.51, C:0.15, G:0.17, T:0.17
Consensus pattern (140 bp):
AGGATTAAACCACCAGTCAAAAAATAAAAACGACCACGATTAAACCATGAGTCAAAAAATAAAAA
TAATCCAGATTAAACCATGAGTCAGAAAATGAAAACGAGCCAGAATAAACCACAAGTCAAAAAAT
GGAAACAACC
Found at i:5319809 original size:176 final size:176
Alignment explanation
Indices: 5319438--5319842 Score: 410
Period size: 176 Copynumber: 2.3 Consensus size: 176
5319428 ATTAAACTGT
* * * *
5319438 GAGTCAGAAGATGAAAACGACGGTGATTAAACCATGAGTCAAAAAATGAAAACAACCCAGATTAA
1 GAGTCAGAAAATGAAAATGACGATGATTAAACCATGAGTCAAAAAATGAAAATAACCCAGATTAA
* * * * ** ***
5319503 ACCACAAGTCAGAAAATGAAAACTACTAGGATTAAACCACAAGTCAGAAAATGAAAATGATTGGG
66 ACCACAAGTCAAAAAATGAAAACGACCAGGATTAAACCACAAGTCAAAAAATGAAAACAACCAGG
* *
5319568 ATTAAACTACCCATCAAAACAAGAAAAATGATAGGAATTAAACCAC
131 ATTAAACCACCCATCAAAACAAGAAAAATGATAGGAATTAAACCAA
* * * * *
5319614 GAGTCAAAAAATAAAAATGACTATGATTAAACCATGAGTCAAAAAAAGAAAATAA-TCATGATTA
1 GAGTCAGAAAATGAAAATGACGATGATTAAACCATGAGTCAAAAAATGAAAATAACCCA-GATTA
** ** * * *
5319678 TGCCATGAGTCAAAAAATGAAAACGAGCCA-GATTAAACTACTAGTCAAAAAATGGAAACAACCA
65 AACCACAAGTCAAAAAATGAAAACGA-CCAGGATTAAACCACAAGTCAAAAAATGAAAACAACCA
*
5319742 GGATTAAACCA-CCATTCCAAAA-AAGAAAAATGATCATG-ATTAAACCATA
129 GGATTAAACCACCCA-T-CAAAACAAGAAAAATGAT-AGGAATTAAACCA-A
* * * *
5319791 G-GTTAGAAAATGAAAATGATCGA-GATTAAACTATAAGTCAGAAAATGAAAAT
1 GAGTCAGAAAATGAAAATGA-CGATGATTAAACCATGAGTCAAAAAATGAAAAT
5319843 GACTGAGAAT
Statistics
Matches: 186, Mismatches: 36, Indels: 14
0.79 0.15 0.06
Matches are distributed among these distances:
175 5 0.03
176 169 0.91
177 12 0.06
ACGTcount: A:0.52, C:0.15, G:0.15, T:0.19
Consensus pattern (176 bp):
GAGTCAGAAAATGAAAATGACGATGATTAAACCATGAGTCAAAAAATGAAAATAACCCAGATTAA
ACCACAAGTCAAAAAATGAAAACGACCAGGATTAAACCACAAGTCAAAAAATGAAAACAACCAGG
ATTAAACCACCCATCAAAACAAGAAAAATGATAGGAATTAAACCAA
Found at i:5323045 original size:35 final size:36
Alignment explanation
Indices: 5322966--5323033 Score: 102
Period size: 36 Copynumber: 1.9 Consensus size: 36
5322956 AAAAATACTA
** *
5322966 GGATTAAAGTACGAGTTAAAAAATGAAAGACAACCT
1 GGATTAAACCACGAGTGAAAAAATGAAAGACAACCT
5323002 GGATTAAACCACGAGTGAAAAAATGAAA-ACAA
1 GGATTAAACCACGAGTGAAAAAATGAAAGACAA
5323034 GTGGAATTAA
Statistics
Matches: 29, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
35 4 0.14
36 25 0.86
ACGTcount: A:0.53, C:0.12, G:0.19, T:0.16
Consensus pattern (36 bp):
GGATTAAACCACGAGTGAAAAAATGAAAGACAACCT
Found at i:5323078 original size:35 final size:34
Alignment explanation
Indices: 5323039--5323135 Score: 99
Period size: 35 Copynumber: 2.8 Consensus size: 34
5323029 AACAAGTGGA
5323039 ATTAAACATTGAGTCAGAAAAAGAAAATGACCT-AG
1 ATTAAACA-TGAGTCAGAAAAAGAAAATGA-CTAAG
* * * *
5323074 ATTAAAGAATGTGCCA-AAAAATGGAAATGACTAAG
1 ATTAAA-CATGAGTCAGAAAAA-GAAAATGACTAAG
5323109 ATTAAACCATGAGTCAGAAAAAGAAAA
1 ATTAAA-CATGAGTCAGAAAAAGAAAA
5323136 ATGAACAGGA
Statistics
Matches: 49, Mismatches: 9, Indels: 8
0.74 0.14 0.12
Matches are distributed among these distances:
34 7 0.14
35 36 0.73
36 6 0.12
ACGTcount: A:0.54, C:0.10, G:0.18, T:0.19
Consensus pattern (34 bp):
ATTAAACATGAGTCAGAAAAAGAAAATGACTAAG
Found at i:5323440 original size:35 final size:35
Alignment explanation
Indices: 5323218--5323494 Score: 216
Period size: 35 Copynumber: 7.9 Consensus size: 35
5323208 AAAAATGATT
* ** *
5323218 GAGATTAAACCATGAGTCAAAAAAATGAATGCGATC
1 GAGATTAAACCACGAGTC-AAAAAATGAAAACGACC
* * * *
5323254 G-GGTTAAATCACGAGTCAAGAAATGAAAACGATC
1 GAGATTAAACCACGAGTCAAAAAATGAAAACGACC
* * *
5323288 GTGATTAAAACACGAGTC-AAAAATGAAGAACGATC
1 GAGATTAAACCACGAGTCAAAAAATGAA-AACGACC
** * *
5323323 GAGATTAAACTGCAAGTCAAAAAATGAAAATGACC
1 GAGATTAAACCACGAGTCAAAAAATGAAAACGACC
* ** * * * *
5323358 GTGATTAAACCGTGAGACAGAAGATGAAAACGACG
1 GAGATTAAACCACGAGTCAAAAAATGAAAACGACC
* * *
5323393 GTGAATTAAACCATGAGTCAAAAAATGAAAACAACC
1 GAG-ATTAAACCACGAGTCAAAAAATGAAAACGACC
* * * *
5323429 CAGATTAAACCACAAGTTCAGAAAATGAAAACGACT
1 GAGATTAAACCACGAG-TCAAAAAATGAAAACGACC
* * *
5323465 AAGATTAAACCACAAGTCAGAAAATGAAAA
1 GAGATTAAACCACGAGTCAAAAAATGAAAA
5323495 NNNNNNNNNN
Statistics
Matches: 197, Mismatches: 39, Indels: 11
0.80 0.16 0.04
Matches are distributed among these distances:
34 23 0.12
35 106 0.54
36 68 0.35
ACGTcount: A:0.49, C:0.15, G:0.19, T:0.17
Consensus pattern (35 bp):
GAGATTAAACCACGAGTCAAAAAATGAAAACGACC
Found at i:5324554 original size:36 final size:35
Alignment explanation
Indices: 5324495--5324574 Score: 99
Period size: 36 Copynumber: 2.2 Consensus size: 35
5324485 NNNNNNNNNN
* *
5324495 TTTTCATTTTTCTGATTCGTGATTTAATCCTT-GTTG
1 TTTTCA-TTTTCTGACTCATGATTTAAT-CTTGGTTG
*
5324531 TTTTTCATTTTCTGACTCATGATTTAATTTTGGTTG
1 -TTTTCATTTTCTGACTCATGATTTAATCTTGGTTG
5324567 TTTTCATT
1 TTTTCATT
5324575 ATCTAAGACG
Statistics
Matches: 39, Mismatches: 3, Indels: 4
0.85 0.07 0.09
Matches are distributed among these distances:
35 10 0.26
36 23 0.59
37 6 0.15
ACGTcount: A:0.15, C:0.12, G:0.12, T:0.60
Consensus pattern (35 bp):
TTTTCATTTTCTGACTCATGATTTAATCTTGGTTG
Found at i:5324652 original size:35 final size:35
Alignment explanation
Indices: 5324601--5332543 Score: 725
Period size: 35 Copynumber: 227.8 Consensus size: 35
5324591 AATCGCTCGT
* * *
5324601 ATTTTGATTTTATGACTCGTGGTTTATTCTCAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
** *
5324636 ATTTTCATTTTCTGACTTATAGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *
5324671 ATTTTCATTTTCTAAC-CTATGGTTTAATCATGA-TC
1 ATTTTCATTTTCTGACTC-GTGGTTTAATC-TCAGTC
* * * *
5324706 ATTTTTC-TTTTTTGGAATGGTGGTTTAATC-CTGGTTC
1 A-TTTTCATTTTCT-GACTCGTGGTTTAATCTC-AG-TC
* * * * *
5324743 -TTTCCATTTTTTGACTAGTAGTTTAATCT-GGCTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * ** *
5324777 GTTTTCATTTTTTGACTCATGGCATAA--TCAGGATT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
* *
5324812 ATTTTCATTTTTTGACTCATGGTTTAATCAT-AGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC-TCAGTC
* * * *
5324847 ATTTTTATTTTTTGATTCGTGGTTTAATCCCTA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * * *
5324882 ATTTT-TTTTTTTGA-TGGGTAGTTTAATCCCAATC
1 ATTTTCATTTTCTGACT-CGTGGTTTAATCTCAGTC
* *
5324916 GTTTTCATTTTCTGACTTGTGGTTTAATC-CTAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * ** *
5324951 GTTTTCATTTTTTGACTTGTGGTATAATCTGGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * *
5324986 GTTTTCATTTTTTCACTCATGGTTTAATCACCGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * ** * *
5325021 GTTTTCATCTTCTGACTCACGGTTTAATCACGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * ** *
5325056 ATTTTCATTTTTTTGACTTGCAGTTTAATCTCGGTC
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5325092 GTTCTTCATTTTTTGACTCGT-GTTTAA-ATCACGATC
1 ATT-TTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
* * * *
5325128 ATTTTCA-TTTCTTGACTCGTGATTTAAACCCGATTGC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTC-AGT-C
* * *
5325165 A--TTCATTTTTTGACTCATGGTTTAATCTCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
*
5325198 ATTTT--TCTTT-T---TCAT--TTT--TCT-A-TC
1 ATTTTCAT-TTTCTGACTCGTGGTTTAATCTCAGTC
* * * * *
5325222 ATTCTCATTTTCTAACTCGTAGCTTAAT-TCCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCT-CAGTC
* * * * *
5325257 ATTTTCATTTCCTGATTCATGGTTTAATC-CTGTTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *
5325292 ATTTTTCTTTTTCTGACTCTTGGTTTAATCTTAGTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * * *
5325328 ATTTCCATTTTCTGGCACATGCTTTAATCTTAGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * *
5325363 GTTTTCATTATCTAAGACAC--GATCTAATCCCTC-G-C
1 ATTTTCATTTTCT--GACTCGTGGTTTAAT--CTCAGTC
* * *
5325398 ATTTTCATTTTATGACTCCTGGTTTATTCTCAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * **
5325433 ATTTTCATTTTCTCACTCATAATTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *
5325468 ATTTTCATTTTCTGACCCATGGTTTAATCT-TGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * ** *
5325503 ATTTTTCTTTTTTTGACTGGTGGTTTAATCTTGGTT
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * *
5325539 GTTTCCATTTTTTGACTTGCGGTTTAATCT-AGCTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * *
5325574 GTTTTCATTTCCTGACTCATGGCTTAA--TCAGGATT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
* * *
5325609 ATTTTCATTTTTTGACTCGTGGTCTAATCGT-GGTCC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC-TCAGT-C
* * * *
5325645 TTTTTAATTTTTTGACTCGTGGTTTAATCCTTA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* * * * ** * *
5325680 TTTTTTTCATTTTTTGATTGGTATTTTAATCCCAATC
1 --ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* *
5325717 ATTTTCATTTTTTGAC-CTGTGGTTTAATC-CTGGTC
1 ATTTTCATTTTCTGACTC-GTGGTTTAATCTC-AGTC
* *** * *
5325752 TTTTTCATTTTCTGACTTACGATTTAATCT-TGTTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5325787 ATTTTTCTTTTTCTGACTGGTGGTTTAATCCCGGTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* *
5325823 A-TTTCATTTTTCTGACTCATGGTTTAATCTTAGTC
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * *
5325858 GTTTCCATTTTCTGGCTCATGCTTTAATCT-AGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * * * *
5325893 ATTTTCTTTTTCTGACTCAAT-GTTTAATCCCACTT
1 ATTTTCATTTTCTGACTC-GTGGTTTAATCTCAGTC
* * * *
5325928 GTTTTCGTTTTCTGACTAGTGGTTTAATC-CAGGTTG
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
* * * * * ** *
5325964 TTTTTCATTTTTTAAGTCATACTTTAATCCCAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * ** * * *
5325999 GTTTTTA-TTTCTTGACTCATCATTCAAACT-GGTC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAGTC
*** * *
5326033 GCATTCATTTTCTAACTCGTGGTTTAGTCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* *** * * * *
5326068 ATTTTTA-TTTCATTTTTCGATCGTTTTCATTTTCTGACTC
1 ATTTTCATTTTC-TGACTCG-T-GGTTT-A--ATCTCAGTC
* * * * ** * *
5326108 ATGGTTT-A-ATCCT-AAT--TGTTTTCGTTTTC--TG
1 AT--TTTCATTTTCTGACTCGTGGTTT-AATCTCAGTC
* * ** *
5326139 A-CTTAATGTTT-AAACTCGATCGTTT--TC-C--T-
1 ATTTTCAT-TTTCTGACTCG-TGGTTTAATCTCAGTC
** * * * *
5326168 -TTTTC--TAGCT-AGT-G-GTTTAATCTCGGTCA-T-
1 ATTTTCATTTTCTGACTCGTGGTTTA-ATC--TCAGTC
* *
5326198 -TTTTCATTTTCTGACTCGTGGTTTAATCCTTA-TG
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* * * * ** *
5326232 GTTTTCATTTTTTGCCTAGTTATTTAATC-CCGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* *
5326267 ATTTTTTATTTT-TGACTCGTGATTTAATCTCAGTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * *
5326302 GTTGTCA-TTTCTTGACTCATGATTTAATC-CCGATT
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
* * * * * * *
5326337 GTTTTCA-TTTCTTAACTCGCGATTTAAAC-CTGATT
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
* * *
5326372 GTATTCATTTTTTGACTCGTGGTTTAATACT-AGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* * ***
5326407 GTTTTCATTTTTTGACTTAAGGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
**
5326442 ATTTTCATTTTCTGACTCGCAGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * **
5326477 TTTTTTATTTTCTAACTCGTAGTTTAATAC-GGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* *** *
5326512 ATTTTCATTTTTTGACTCACAGTTTAATC-CTGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5326547 ATTTTCATTTTTTAACTCGTGATTTAATTTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * * * *
5326582 ATTTTTCGTTCTCTGACAT-GTGATTTAGTTTCGGTG
1 A-TTTTCATTTTCTGAC-TCGTGGTTTAATCTCAGTC
* * * * * *
5326618 GTTTTGATTTTTTGACTCATGATTTATTCTCAGT-
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * *
5326652 AGTTTTTTTATTTTTTGACAT-GTGATTTAATATC-GATC
1 A---TTTTCATTTTCTGAC-TCGTGGTTTAATCTCAG-TC
* * * * *
5326690 ATTTTCATTTCTCT-AGCTCATGATTTAATGAT-GGTTG
1 ATTTTCATTT-TCTGA-CTCGTGGTTTAAT-CTCAG-TC
* * * ** *
5326727 TTTTTCATTTTTTGACTTGTCATTTAATCTCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * ** *
5326762 GTTTTCATTTTTTCACTCACGGTTTAATC-CTGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* *
5326797 ATTTTCATTTTTTGACTCGTGGTTTAATCTC-GATT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* ** ** * * **
5326832 GTTTTTGTTTTCTGACTCACGATTTAATTTTGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* ***
5326867 ATTTTCATTTTTTGACTTACGGTTTAAT-TCCTA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCT-C-AGTC
* * ** * * *
5326902 GCTTTT-GTTCCCTGACTCATGATTTAATC-CTGGTC
1 -ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * * *
5326937 ATTTTTATTTTTTTGATTCGTGATTTAATC-CTTGTT
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * * ** *
5326973 GTTTTCATTTTTTGACTCATGATTTAATTTTGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * ** * *
5327008 GTTTTCATTATCTAAGACGCGGTCTAATCGCTC-GT-
1 ATTTTCATTTTCTGACTCGTGGTTTAAT--CTCAGTC
* * * *
5327043 ATTTTGATTTTATGAGTCGTGGTTTATTCTCAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
** *
5327078 ATTTTCATTTTCTGACTTATAGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *
5327113 ATTTTCATTTTCTAAC-CTATGGTTTAATCATGA-TC
1 ATTTTCATTTTCTGACTC-GTGGTTTAATC-TCAGTC
* * * * *
5327148 ATTTTTC-TTTTTTGGAATGGTGGTTTAATC-CTGGTT
1 A-TTTTCATTTTCT-GACTCGTGGTTTAATCTC-AGTC
* * * * * *
5327184 GTTTCCATTTTTTGACTAGTAGTTTAATCT-GGCTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * ** *
5327219 ATTTTCATTTTTTGACTCATGGCATAA--TCAGGATT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
* *
5327254 ATTTTCATTTTTTGACTCATGGTTTAATCAT-AGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC-TCAGTC
* * *
5327289 ATTTTTATTTTTTGACTCGTGGTTTAATCCCTA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * *
5327324 ATTTTC-TGTTTTTGA-TGGGTAGTTTAATCCCAATC
1 ATTTTCAT-TTTCTGACT-CGTGGTTTAATCTCAGTC
* *
5327359 GTTTTCATTTTCTGACTTGTGGTTTAATC-CTAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * *
5327394 GTTTTCATTTTCTGACTTGTGGTTTAATCT-AGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * * * * * *
5327429 GTTTTTATTTTTTCACTCATGGTTTAATCACCGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * ** * *
5327464 GTTTTCATCTTCTGACTCACGGTTTAATCGCGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * **
5327499 ATTTTCATTTTTTTGACTTGCAGTTTAATCTC-GATC
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *
5327535 GTTCTTCATTTTTTGACTCGT-GTTTAA-ATCACGATC
1 ATT-TTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
* * *
5327571 ATTTTCA-TTTCTTGACTCGTGATTTAAAC-CCGATC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
*** * * *
5327606 GCATTCATTTTTTGACTCATGGTTTAATCTCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
*
5327641 ATTTTTC-TTTT-TCA-T--T--TTT--T-T-A-TC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * *
5327665 ATTCTCATTTTCTAACTCGTAGCTTAAT-TCCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCT-CAGTC
* * * * *
5327700 ATTTTCATTTCCTGATTCATGGTTTAATC-CTGTTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5327735 ATTTTTCTTTTTTTGACTCATGGTTTAATCTTAGTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * * *
5327771 GTTTCCATTTTCTG-GTGCATGCTTTAATCTTAGTT
1 ATTTTCATTTTCTGACT-CGTGGTTTAATCTCAGTC
* * * * *
5327806 GTTTTCATTATCTAAGACAC--GATCTAATCCCTC-G-C
1 ATTTTCATTTTCT--GACTCGTGGTTTAAT--CTCAGTC
* *
5327841 ATTTTCATTTTATGACTCGTGGTTTATTCTCAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5327876 ATTTTCATTTTCTCACTCATAGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * * *
5327911 ATTTTCATTTTCTAACCCATGGTTTAATCCTGATTG
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* ** * * * *
5327947 TTTTTTTTTTTTTGACTGGTGGTTTAATC-CTGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * *
5327982 GTTTTCATTTTTTGACTTGTGATTTAATCT-GGCTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5328017 ATTTTCATTTCCTGACTCATGGCTTAA--TCAGGATT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
* * *
5328052 ATTTTCATTTTTTGACTCGTGGTCTAATCGT-GGTCC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC-TCAGT-C
* * * * *
5328088 TTTTTAATTTTTTGACTCATGGTTTAATCCTTA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* * * * * * ** * *
5328123 TTTTTTCTTTTTTTAATTGGTATTTTAATCCCAATC
1 -ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * *
5328159 GTTTTCATTTTTTGACTTGTGGTTTAATC-CTGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * *
5328194 TTTTTCATTTTCTGACTTGTGGTTTAATCT-AGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * ** * *
5328229 GTTTTCATTTTTTGACTCACGGTTTAATCCCCGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* ** * *
5328264 GTTTTCATCTTT-TGACTCACGATTTAATCGTGA-TC
1 ATTTTCAT-TTTCTGACTCGTGGTTTAATC-TCAGTC
* * * * * *
5328299 ATTTTCATTTTTTTGACTTGCGATTTAATGTC-GATT
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * * **
5328335 GTTCTTCATTTTTTAACTTGTGTTTTAATGAC-GATC
1 ATT-TTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5328371 GTTTTCA-TTTCTTGACTCGTGATTTAAAC-CCGATC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
*** * * * *
5328406 GCATTCATTTTCTGACTCATTGTTTAATCCCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
*
5328441 ATTTTTC-TTTT-TCA-T--T--TTT--T-T-A-TC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * *
5328465 GTTCTCATTTTCTAACTCGTAGCTTAAT-TCCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCT-CAGTC
* ** *
5328500 ATTTTCATTTCCTGACTCACGGTTTAATCT-TGTTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *
5328535 ATTTTTCTTTTTCTGACTGGTGGTTTAATC-CCGATC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *
5328571 ATTTTCATTTTTTGACTCATGGTTTAATCTTAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5328606 GTTTTCATTTTCTGGCTCGTGCTTTAATCT-AGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * * * * * *
5328641 ATTTT-TTTTTCTAACTCAAT-GTCTAATCCCACTT
1 ATTTTCATTTTCTGACTC-GTGGTTTAATCTCAGTC
* * * * *
5328675 GTTTTCGTTTTTTGACTCATGGTTTAATC-CAGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * ** *
5328710 ATTTTTCATTTTTTAACTCGTACTTTAATCCCAGTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * *
5328746 ATTTT-AATTTCTTGACTCATGATTCAAACT-GGTC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAGTC
*** * * *
5328780 GCATTCATTTTCTAACTCGTGGTTTAGT-TCCGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
** *** * * * * * *
5328815 ATTTTTTTTTTCATTTTTTGATCGTTTCATTTTCTGAC
1 ATTTTCATTTTC-TGACTCG-TGGTTT-AATCTCAGTC
** ** * * * * *
5328853 -TCGT-AGTTTAATCCCAATCAT--TTTCATTTTCTGACTC
1 ATTTTCA-TTT--TCTGACTCGTGGTTT-A--ATCTCAGTC
* * * ** *
5328890 AATGTTT-A--ATCTCAGTCGT--TTTCCTTTTCTAG-C
1 -AT-TTTCATTTTCTGACTCGTGGTTT-AATCTC-AGTC
* * * * ** ** ** *
5328923 TAGTGGTTCAATCTCTGTCATTTTCATTTTCTGACTCGAGGTTTA
1 -A-T-TTTCATTTTCTGAC-TCGTGGTTTAAT--CTC-A-G--TC
* * * *
5328968 ATCCTTATCATTTTCATTTTTTGACTAGTGATTTAATCCCGGTC
1 AT--TT-TCATTTTC------TGACTCGTGGTTTAATCTCAGTC
* *
5329012 ATTTT-TTATTTCTGACTCGTGATTTAATCTCAGTC
1 ATTTTCAT-TTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * *
5329047 GTTGTCA-TTTCTTGACTCATGATTTAATC-CTGATT
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
* * * * * *
5329082 GTTTTCA-TTTCTTAACTCGTGATTTAAAC-CCGATT
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
* * * *
5329117 GTATTCATTTTTTGACTCGTGGTTTAATC-CTGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * ** * *
5329152 GTTTTCATTTTTTGACTTATGGTTTAATCTCGGAC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5329187 GTTTTCATTTTCTAACTCGCGGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * *
5329222 TTTTTTATTTTCTAACTCGTAGTTTAATAC-GAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* * *** *
5329257 ATTTTCATTTTTTTGCCTCACAGTTTAATC-CCGATC
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5329293 ATTTCCATTTGT-TAACTCCTGATTTAAT-TC-GATC
1 ATTTTCATTT-TCTGACTCGTGGTTTAATCTCAG-TC
* ** * * * *
5329327 ATTTT-TTGTTCTCTGACAAGTGATTTAGTTTCGGT-
1 ATTTTCAT-TT-TCTGACTCGTGGTTTAATCTCAGTC
** * * * * *
5329362 GGTTTCGATTTTTTGACTCATGTTTTATTCTCA-TT
1 ATTTTC-ATTTTCTGACTCGTGGTTTAATCTCAGTC
* *
5329397 AGTTTTCGATTTT-TGACAT-GTGATTTAATATC-GATC
1 A-TTTTC-ATTTTCTGAC-TCGTGGTTTAATCTCAG-TC
* * ** * * *
5329433 ATTTTCATTTCTTTGACTCATCTTTTAA-CGACGGTTG
1 ATTTTCATTT-TCTGACTCGTGGTTTAATC-TCAG-TC
* * *
5329470 TTTTTCATTTTCTGACTTGTGATTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * *** * *
5329505 GTTTTCATTTTTTGACTTACGATTTAATCT-TGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * ** *
5329540 ATTTTCATTTTTTGGCTCATGGTTTAATCTTGGTTG
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* *
5329576 TTTTTGC-TTTT-TGACTCGT-GTTTAATTTTC-GTC
1 ATTTT-CATTTTCTGACTCGTGGTTTAA-TCTCAGTC
* * ***
5329609 ATTTTCTTTTTTTGACTTACGGTTTAAT-TCCTA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCT-C-AGTC
* ** * *
5329644 ACTTTT-GTTCCCTGACTCATGATTTAATCCTC-GTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAAT-CTCAGTC
* * * ** *
5329679 ATTTTCATTTTTTTTGATTCGTGATTTAATCTTTGTT
1 ATTTTCA--TTTTCTGACTCGTGGTTTAATCTCAGTC
* * * ** *
5329716 GTTTTCATTTTCTGACTCGTGATTTAATTTTGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * ** * * *
5329751 GTTTTTATTATCTAAGACGCGATCTAATGCCTC-G-C
1 ATTTTCATTTTCTGACTCGTGGTTTAAT--CTCAGTC
* * * *
5329786 ATTTTCATTTTATGACTCATGGTTTATTCTTAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5329821 ATTTTCATTTTCTAACTCATAGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5329856 ATTTTCATTTTTTGAAC-CATTGTTTAATC-CTGATC
1 ATTTTCATTTTCTG-ACTCGTGGTTTAATCTCAG-TC
* * * * * *
5329891 GTTTTTCTTTTTTTGACTAGTGGTTTAATC-CTGGTT
1 -ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * * * *
5329927 GTTTCCATTTTTTGATTTGTGGTTTAATCT-GGCTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * ** *
5329962 GTTTTCATTTTCTGACTCATGACTTAA--TCAGGATT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-G-TC
*
5329997 ATTTTCATTTTTTGACTCGTGGTTTAATCAT-AGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC-TCAGTC
* * * * *
5330032 ATTTTCATTTTTTGA-TGGGTAGTTTAATCCCAATC
1 ATTTTCATTTTCTGACT-CGTGGTTTAATCTCAGTC
* * *
5330067 GTTTTCATTTTCTGACTTGTGGTTTAATC-CTGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * ** ** *
5330102 CTTTTTATTTTCTGACTTTTGGTTTAATCTGGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * ** * * *
5330137 GTTTTCATTTTTTGACTCACGATTTAATCCCCGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * ** * *
5330172 GTTTTCATCTTCCGACTCAAGGTTTAATCGCGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* ** * *
5330207 GTTTTTTTTTTCCTGACTTGTGGTTTAATCTCGGTC
1 ATTTTCATTTT-CTGACTCGTGGTTTAATCTCAGTC
* * *
5330243 ATTCTTCATTTTTTGACTCGTGCTTTAATCAC-GATC
1 ATT-TTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5330279 GTTTTCA-TTTCTTGACTCGTGATTTAAAC-CCGATC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
*** * * *
5330314 GCATTCATTTTCTGACTCATGGTTTAATCCCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
*
5330349 ATTTTTC-TTTT-TCA-T--T--TTT--T-T-A-TC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * **
5330373 GTTCTCATTTTCTAACTCGTAGCCTAAT-TCCAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCT-CAGTC
* * *
5330408 ATTTTCATTTCCTGACTCATGGTTTAATC-CTGTTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * *
5330443 ATTTTTCTTTTTTCTGACTGGGGGTTTAATCTCGGTA
1 A-TTTTC-ATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * *
5330480 ATTTCCATTTTTTGACTCATGGTTTAATCTTAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * *
5330515 -GTTTCAATTTTCTGGCTTGTGCTTTAATCT-AGGTC
1 ATTTTC-ATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * * *
5330550 ATTTTCTTTTTCTGACTCAAT-GTTTAATCGT-ACTT
1 ATTTTCATTTTCTGACTC-GTGGTTTAATC-TCAGTC
* * *
5330585 GTTTTCGTTTTCTGACTCGTGGTTTAATC-CAGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * * ** *
5330620 ATTTTTCATTTTTTAACTCATACTTTAATCCCAGTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * *
5330656 ATTTTCA-TTTCATGACTCATGATTCAAACT-AGTC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAGTC
*** * * * *
5330690 GCATTCATTTTCTAACTCGTGGTTTAGTCTTAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* *
5330725 ATTTT--TTTT-T---TCAT-TTTTAGA--TC-GT-
1 ATTTTCATTTTCTGACTCGTGGTTTA-ATCTCAGTC
* *
5330750 -TTTTCATTTTTTGACTCGTGGTTTAATCCAAATCATTTTC
1 ATTTTCATTTTCTGACTCGTGGTTTAAT-C---TCA--GTC
* * *
5330790 GTTTTCATTTTCTGACTCAAT-TTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTC-GTGGTTTAATCTCAG-TC
* * * *
5330825 GTTTTTCTTTTTCT-AGCTAGTGGTTTAATCTCGGTC
1 -ATTTTCATTTTCTGA-CTCGTGGTTTAATCTCAGTC
* *
5330861 ATTTTCATTTTATGACTCGTGGTTTAATCTTTA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC-TCAGTC
* * * **
5330896 ATTTTCATTTTTTGACTAGTGATTTAATCTTGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
** *
5330931 ATTTTTTTATTTCTGACTCGTGATTTAATCTCAGTC
1 ATTTTCAT-TTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * * *
5330967 GTTGTCA-TTTCTTGACTCATGATTTAATCCCAATT
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAGTC
* * * * * * *
5331002 GTTTTCA-TTTCTTAACTCGCGATTTAAAC-CTGATT
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
* * * *
5331037 GTATTCATATTT-GGACTCGTGGTTTAATC-CTGGTC
1 ATTTTCAT-TTTCTGACTCGTGGTTTAATCTC-AGTC
* * *
5331072 GTTTTCATTTTTTGACTCATGGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * * * **
5331107 TTTTTTATTCTCTAACTCGTAGTTTAATATGGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* *** *
5331142 ATTTTCATTTTTTGACTCACAGTTTAATCCCGATCATTTTC
1 ATTTTCATTTTCTGACTCGTGGTTTAAT--C--TCA--GTC
* *
5331183 ATTTTCATTTTTTGACTC--GGTTTAATC-CCGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * * *
5331216 ATTTTCATTTTTTAACTCGTGATTTAAGTTTCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAA-TCTCAGTC
* * * * * *
5331252 ATTTTTCATTCTCTGACAT-GTGATTTAGTTTCGGTG
1 A-TTTTCATTTTCTGAC-TCGTGGTTTAATCTCAGTC
* * * * *
5331288 GTTTTGATTTTCTGACTCATGATTTATTCTCAGT-
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
** *
5331322 AGTTTTCAATTTT-TGACAAGTGGTTTAATGTC-GATC
1 A-TTTTC-ATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * ** * *
5331358 ATTTTCATTTCTCTGACTCATGATTTAATAACGGTTG
1 ATTTTCATTT-TCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5331395 TTTTTCATTTTCTGACTTGTGATTTAATCT-TGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5331430 GTTTTCATTTTTTGACTC--AGTTTAATCT-TGATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5331463 ATTTT--TTTT-TTACTCGTGATTTAATCTCGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* ** ** * * **
5331495 GTTTTTGTTTTCTGACTCACGATTTAATTTTGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* *
5331530 ATTTTCATTTTTTGACTTC-TGGTTTAATTCCCA-TC
1 ATTTTCATTTTCTGAC-TCGTGGTTTAA-TCTCAGTC
* * ** * * *
5331565 GCTTTT-GTTCCCTGACTCATGTTTTAATC-CTGGTC
1 -ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * *
5331600 ATTTTCATTTTTTTGATTCGTGATTTAATCCCTA-TT
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * ** *
5331636 GTTTTCATTTTTTGACTCGTGATTTAATTTTGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * ** *
5331671 GTTTTCATTATCTAAGACGTGGTCTAATTCCTC-G-C
1 ATTTTCATTTTCTGACTCGTGGTTTAA-T-CTCAGTC
* *
5331706 ATTTTCATTTTATGACTCGTGGTTTATTCTCAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* *
5331741 ATTTTCATTTTCTGACTCATAGTTTAATCTC-GATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* *
5331776 ATTTTCATTTTCTGAC-CAATGGTTTAATC-CTGATC
1 ATTTTCATTTTCTGACTC-GTGGTTTAATCTCAG-TC
* * * * * *
5331811 ATTTTTCTTTTTTTGACTGGTGCTTTAATC-CTGGTT
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * * * * *
5331847 GTTTCCATTTTTTGACTTGCGGTTTAATCT-TGCTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5331882 GTTTTCATTTTCTGACTCATGGCTTAA--TCAG-G
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5331914 A--TT-ATTTTTTGACTCATGGTTTAATCACAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* *
5331946 ATTTTCATTTTTTGCCTCGTGG-----TC-C--T-
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5331972 -TTTTCATTTTTTTAC-CGGTGGTTTAATCCTTA-TC
1 ATTTTCATTTTCTGACTC-GTGGTTTAAT-CTCAGTC
* * * * *
5332006 ATTTT-TTTTTATG--T-GTAGTTTAATCCCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
** * ** *
5332037 ATTTTCATTTTCTGACTTATGGTTTAATTTGGGTT
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* ** * *
5332072 GTTTTCATTTTCTGACTCACGGTTTAATCCCCGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * ** * *
5332107 GTTTTCATCTTCTGACTCACGATTTAATCATGA-TC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC-TCAGTC
* * *** * *
5332142 ATTTTTATTTTTTTGACTTACGATTTAATCTCGGTC
1 ATTTTCA-TTTTCTGACTCGTGGTTTAATCTCAGTC
* ** * * * *
5332178 GTTCTTTTTTTTTTTACAT-GT-GTTT-TTATCAGGATC
1 ATT-TTCATTTTCTGAC-TCGTGGTTTAATCTCA-G-TC
* * * *
5332214 GTTTTCA-TTTCTTGACTCGTGATTTAAAC-CCGATC
1 ATTTTCATTTTC-TGACTCGTGGTTTAATCTCAG-TC
*** * * * *
5332249 GCATTCATTTTTTGACTCATGGTTTAATCCCAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
*
5332284 ATTTTTC-TTTT-TCA-T--T--TTT--T-T-A-TC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * *
5332308 GTTTTCATTTTCTAATTCGTAGCTTAAT-TCTAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTC-AGTC
* * *
5332343 ATTTTCATTTCCTGACTCATGGTTTAATC-CTGTTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAG-TC
* * * *
5332378 ATTTTTCTTTTTCT-ACTGGTGGTTTAATCCCGGTC
1 A-TTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * *
5332413 ATTTCCATTTTCTGACTCATGGTTTAATCTTAGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
* * * * * *
5332448 GTTTCCATTTTTTGGCTCGTGCTTTAATGT-AGGTC
1 ATTTTCATTTTCTGACTCGTGGTTTAATCTCA-GTC
* * * *
5332483 ATTTT--TTTT-TGACTCAAT-GTTTAATCCCACTT
1 ATTTTCATTTTCTGACTC-GTGGTTTAATCTCAGTC
* *
5332515 GTTTTCGTTTTCTGACTCGTGGTTTAATC
1 ATTTTCATTTTCTGACTCGTGGTTTAATC
5332544 GAGGTTGTTT
Statistics
Matches: 5764, Mismatches: 1546, Indels: 1196
0.68 0.18 0.14
Matches are distributed among these distances:
23 19 0.00
24 36 0.01
25 34 0.01
26 20 0.00
27 7 0.00
28 13 0.00
29 42 0.01
30 35 0.01
31 40 0.01
32 50 0.01
33 116 0.02
34 351 0.06
35 3589 0.62
36 1031 0.18
37 246 0.04
38 18 0.00
39 17 0.00
40 15 0.00
41 53 0.01
42 7 0.00
43 1 0.00
44 5 0.00
45 6 0.00
46 1 0.00
48 2 0.00
50 7 0.00
51 3 0.00
ACGTcount: A:0.18, C:0.18, G:0.13, T:0.51
Consensus pattern (35 bp):
ATTTTCATTTTCTGACTCGTGGTTTAATCTCAGTC
Found at i:5324752 original size:141 final size:140
Alignment explanation
Indices: 5324607--5324876 Score: 312
Period size: 141 Copynumber: 1.9 Consensus size: 140
5324597 TCGTATTTTG
* * * * ** *
5324607 ATTTTATGACTCGTGGTTTATTCTCAG-TCATTTTCATTTTCTGACTTATAGTTTAATCTCGATC
1 ATTTTATGACTAGTAGTTTAATCT-AGCTCATTTTCATTTTCTGACTCATAGCATAATCACGATC
* *
5324671 ATTTTCATTTTCTAAC-CTATGGTTTAATCAT-GATCATTTTTCTTTTTTGGAATGGTGGTTTAA
65 ATTTTCATTTTCTAACTC-ATGGTTTAATCATAG-TCATTTTTATTTTTT-GAATCGTGGTTTAA
5324734 TCCTGGTTCTTTCC
127 TCCTGGTTCTTTCC
* * * * * * *
5324748 ATTTTTTGACTAGTAGTTTAATCTGGCTCGTTTTCATTTTTTGACTCATGGCATAATCAGGATTA
1 ATTTTATGACTAGTAGTTTAATCTAGCTCATTTTCATTTTCTGACTCATAGCATAATCACGATCA
* * *
5324813 TTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTTATTTTTTGATTCGTGGTTTAATCC
66 TTTTCATTTTCTAACTCATGGTTTAATCATAGTCATTTTTATTTTTTGAATCGTGGTTTAATCC
5324877 CTATCATTTT
Statistics
Matches: 107, Mismatches: 19, Indels: 7
0.80 0.14 0.05
Matches are distributed among these distances:
140 16 0.15
141 89 0.83
142 2 0.02
ACGTcount: A:0.20, C:0.15, G:0.14, T:0.51
Consensus pattern (140 bp):
ATTTTATGACTAGTAGTTTAATCTAGCTCATTTTCATTTTCTGACTCATAGCATAATCACGATCA
TTTTCATTTTCTAACTCATGGTTTAATCATAGTCATTTTTATTTTTTGAATCGTGGTTTAATCCT
GGTTCTTTCC
Found at i:5324906 original size:34 final size:35
Alignment explanation
Indices: 5324845--5324926 Score: 103
Period size: 34 Copynumber: 2.4 Consensus size: 35
5324835 TTAATCATAG
* * *
5324845 TCATTTTTATTTTTTGATTCGTGGTTTAATCCCTA
1 TCATTTTTATTTTTTGATGCGTAGTTTAATCCCAA
*
5324880 TCATTTTT-TTTTTTGATGGGTAGTTTAATCCCAA
1 TCATTTTTATTTTTTGATGCGTAGTTTAATCCCAA
* *
5324914 TCGTTTTCATTTT
1 TCATTTTTATTTT
5324927 CTGACTTGTG
Statistics
Matches: 40, Mismatches: 6, Indels: 2
0.83 0.12 0.04
Matches are distributed among these distances:
34 28 0.70
35 12 0.30
ACGTcount: A:0.17, C:0.13, G:0.12, T:0.57
Consensus pattern (35 bp):
TCATTTTTATTTTTTGATGCGTAGTTTAATCCCAA
Found at i:5324995 original size:174 final size:175
Alignment explanation
Indices: 5324637--5325209 Score: 459
Period size: 174 Copynumber: 3.3 Consensus size: 175
5324627 TTCTCAGTCA
* * * * * * * *
5324637 TTTTCATTTTCTGACTTATAGTTTAATC-TCGATCATTTTCATTTTCTAAC-CTATGGTTTAATC
1 TTTTCATTTTTTGACTCATGGTTTAATCATAG-TCATTTTTATTTTTTGACTC-ACGGTTTAATC
* * ** *
5324700 ATGATCATTTT-TCTTTTTTGGAATGGTGGTTTAAT-CC--TGGTTCTTTCCATTTTTTGACTAG
64 ACGATCATTTTAT-TTTTTT-GACTGGCAGTTTAATCCCAATCGTTC-TT-CATTTTTTGACTAG
* * * *
5324761 TAGTTTAAT-CTGGCTCGTTTTCATTTTTTGACTCATGGCATAATCAGGATTA
125 T-GTTTAATCCTAG-TCGTTTTCATTTTTTGACTCGTGGTATAATCAGGATTG
* ** *
5324813 TTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTTATTTTTTGATTCGTGGTTTAATCCC
1 TTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTTATTTTTTGACTCACGGTTTAATCAC
* * * *
5324878 TATCATTTT-TTTTTTTGA-TGGGTAGTTTAATCCCAATCGTT-TTCATTTTCTGACTTGTGGTT
66 GATCATTTTATTTTTTTGACT-GGCAGTTTAATCCCAATCGTTCTTCATTTTTTGACTAGT-GTT
* * *
5324940 TAATCCTAGTCGTTTTCATTTTTTGACTTGTGGTATAATCTGGGTTG
129 TAATCCTAGTCGTTTTCATTTTTTGACTCGTGGTATAATCAGGATTG
* ** * * * *
5324987 TTTTCATTTTTTCACTCATGGTTTAATCACCGTCGTTTTCATCTTCTGACTCACGGTTTAATCAC
1 TTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTTATTTTTTGACTCACGGTTTAATCAC
* * * ** *
5325052 GGTCATTTTCATTTTTTTGACTTGCAGTTTAATCTCGGTCGTTCTTCATTTTTTGACTCGTGTTT
66 GATCATTTT-ATTTTTTTGACTGGCAGTTTAATCCCAATCGTTCTTCATTTTTTGACTAGTGTTT
* * * * * * **
5325117 AAATCACGA-TCATTTTCATTTCTTGACTCGTGATTTAAACCCGATTG
130 -AATC-CTAGTCGTTTTCATTTTTTGACTCGTGGTATAATCAGGATTG
** * *
5325164 CATTCATTTTTTGACTCATGGTTTAATC-TCAATCATTTTTCTTTTT
1 TTTTCATTTTTTGACTCATGGTTTAATCAT-AGTCATTTTTATTTTT
5325210 CATTTTTCTA
Statistics
Matches: 318, Mismatches: 65, Indels: 27
0.78 0.16 0.07
Matches are distributed among these distances:
173 1 0.00
174 125 0.39
175 13 0.04
176 87 0.27
177 90 0.28
178 2 0.01
ACGTcount: A:0.19, C:0.17, G:0.14, T:0.51
Consensus pattern (175 bp):
TTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTTATTTTTTGACTCACGGTTTAATCAC
GATCATTTTATTTTTTTGACTGGCAGTTTAATCCCAATCGTTCTTCATTTTTTGACTAGTGTTTA
ATCCTAGTCGTTTTCATTTTTTGACTCGTGGTATAATCAGGATTG
Found at i:5325154 original size:71 final size:68
Alignment explanation
Indices: 5324987--5325154 Score: 169
Period size: 71 Copynumber: 2.4 Consensus size: 68
5324977 ATCTGGGTTG
* *
5324987 TTTTCATTTTTTCACTCATGGTTTAATCACCGTCGTTTTCATCTTCTGACTCACGGTTTAATCAC
1 TTTTCATTTTTTGACTC-TGATTTAATCACCGTCGTTTTCATCTTCTGACT-ACGGTTTAATCAC
*
5325052 GGTCA
64 GATCA
* * * *
5325057 TTTTCATTTTTTTGACT-TGCAGTTTAATCTCGGTCGTTCTTCATTTTTTGACT-CGTGTTTAAA
1 TTTTCA-TTTTTTGACTCTG-A-TTTAATCACCGTCGTT-TTCATCTTCTGACTACG-GTTT-AA
5325120 TCACGATCA
60 TCACGATCA
*
5325129 TTTTCATTTCTTGACTCGTGATTTAA
1 TTTTCATTTTTTGACTC-TGATTTAA
5325155 ACCCGATTGC
Statistics
Matches: 82, Mismatches: 8, Indels: 15
0.78 0.08 0.14
Matches are distributed among these distances:
69 2 0.02
70 8 0.10
71 41 0.50
72 29 0.35
73 2 0.02
ACGTcount: A:0.18, C:0.20, G:0.13, T:0.48
Consensus pattern (68 bp):
TTTTCATTTTTTGACTCTGATTTAATCACCGTCGTTTTCATCTTCTGACTACGGTTTAATCACGA
TCA
Found at i:5325848 original size:106 final size:106
Alignment explanation
Indices: 5325397--5325974 Score: 339
Period size: 106 Copynumber: 5.4 Consensus size: 106
5325387 TAATCCCTCG
* * * * * * *
5325397 CATTTTCATTTTATGACTCCTGGTTT-ATTCTCAGTCATTTTCATTTTCTCACTCATAATTTAAT
1 CATTTTCATTTTTTGACTCGTGGTTTAATCCT-GGTCTTTTTCATTTTCTGACTCATGATTTAAT
* * *** * ***
5325461 CTCGATCA-TTTTCATTTTCTGACCCATGGTTTAATCTTGAT
65 CTTGATCATTTTTCTTTTTCTGACTGGTAGTTTAATCCCAAT
* * * * * *** *
5325502 CATTTTTCTTTTTTTGACTGGTGGTTTAATCTTGGT-TGTTTCCATTTTTTGACTTGCGGTTTAA
1 CA-TTTTCATTTTTTGACTCGTGGTTTAATCCTGGTCT-TTTTCATTTTCTGACTCATGATTTAA
* * * * * ** * * ***
5325566 TCTAGCTC-GTTTTCATTTCCTGACTCATGGCTTAATCAGGAT
64 TCTTGATCATTTTTCTTTTTCTGACTGGTAGTTTAATCCCAAT
* * * * * * *
5325608 TATTTTCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACTCGTGGTTTAAT
1 CATTTTCATTTTTTGACTCGTGGTTTAATCCTGGT-CTTTTTCATTTTCTGACTCATGATTTAAT
* * *
5325673 CCTT-ATCTTTTTTTCATTTTT-TGATTGGTATTTTAATCCCAAT
65 -CTTGATC-ATTTTTC-TTTTTCTGACTGGTAGTTTAATCCCAAT
* *
5325716 CATTTTCATTTTTTGAC-CTGTGGTTTAATCCTGGTCTTTTTCATTTTCTGACTTACGATTTAAT
1 CATTTTCATTTTTTGACTC-GTGGTTTAATCCTGGTCTTTTTCATTTTCTGACTCATGATTTAAT
* * **
5325780 CTTGTTCATTTTTCTTTTTCTGACTGGTGGTTTAATCCCGGT
65 CTTGATCATTTTTCTTTTTCTGACTGGTAGTTTAATCCCAAT
* * * * * * *
5325822 CA-TTTCATTTTTCTGACTCATGGTTTAATCTTAGTCGTTTCCATTTTCTGGCTCATGCTTTAAT
1 CATTTTCATTTTT-TGACTCGTGGTTTAATCCTGGTCTTTTTCATTTTCTGACTCATGATTTAAT
* * ** *
5325886 CTAGGTCA-TTTTCTTTTTCTGACT-CAATGTTTAATCCCACT
65 CTTGATCATTTTTCTTTTTCTGACTGGTA-GTTTAATCCCAAT
** * * * * *
5325927 TGTTTTCGTTTTCTGACTAGTGGTTTAATCCAGGTTGTTTTTCATTTT
1 CATTTTCATTTTTTGACTCGTGGTTTAATCCTGG-TCTTTTTCATTTT
5325975 TTAAGTCATA
Statistics
Matches: 365, Mismatches: 90, Indels: 35
0.74 0.18 0.07
Matches are distributed among these distances:
105 89 0.24
106 192 0.53
107 33 0.09
108 48 0.13
109 3 0.01
ACGTcount: A:0.17, C:0.18, G:0.14, T:0.52
Consensus pattern (106 bp):
CATTTTCATTTTTTGACTCGTGGTTTAATCCTGGTCTTTTTCATTTTCTGACTCATGATTTAATC
TTGATCATTTTTCTTTTTCTGACTGGTAGTTTAATCCCAAT
Found at i:5326449 original size:70 final size:69
Alignment explanation
Indices: 5326084--5351753 Score: 2111
Period size: 70 Copynumber: 365.9 Consensus size: 69
5326074 ATTTCATTTT
* * * ** * * * *
5326084 TCGATCGTTTTCATTTTCTGACTCATGGTTTAATCCTAATTGTTTTCGTTTTCTGACTTAAT-GT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGAC-TCATGGT
*
5326148 TTAAAC
64 TTAATC
* * * * * *
5326154 TCGATCGTTTTCCTTTTTCT-AGCTAGTGGTTTAATCTCGGTCATTTTTCATTTTCTGACTCGTG
1 TCGATCATTTTCATTTTT-TGA-CTCGTGGTTTAATCTC-GTC-GTTTTCATTTTTTGACTCATG
5326218 GTTTAATC
62 GTTTAATC
* ** * * ** * * * * *
5326226 -CTTATGGTTTTCATTTTTTGCCTAGTTATTTAATCCCGATCATTTT-TTATTTTTGACTCGTGA
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCAT-TTTTTGACTCATGG
5326289 TTTAATC
63 TTTAATC
* * * * * * * * * ** *
5326296 TC-AGTCGTTGTCATTTCTTGACTCATGATTTAATCCCGATTGTTTTCATTTCTTAACTCGCGAT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5326360 TTAAAC
64 TTAATC
** * * * *
5326366 -CTGATTGTATTCATTTTTTGACTCGTGGTTTAATACTAGTCGTTTTCATTTTTTGACTTAAGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGT
5326430 TTAATC
64 TTAATC
* ** * * * * * *
5326436 TCGATCATTTTCATTTTCTGACTCGCAGTTTAATCTCGATCTTTTTTATTTTCTAACTCGTAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5326501 TAATAC
65 TAAT-C
* * *** * * * *
5326507 -GGGTCATTTTCATTTTTTGACTCACAGTTTAATC-CTGATCATTTTCATTTTTTAACTCGTGAT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGGT
*
5326570 TTAATT
64 TTAATC
* * * * * * * * *
5326576 TCGATCATTTTTCGTTCTCTGACAT-GTGATTTAGTTTCGGTGGTTTTGATTTTTTGACTCATGA
1 TCGATCA-TTTTCATTTTTTGAC-TCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
*
5326640 TTTATTC
63 TTTAATC
* * * * * *
5326647 TCAGTAGT-TTTTTTATTTTTTGACAT-GTGATTTAATATCGATCATTTTCATTTCTCT-AGCTC
1 TC-G-A-TCATTTTCATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTT-TTTGA-CTC
* *
5326709 ATGATTTAATGA
59 ATGGTTTAAT-C
* * ** * ** * * *
5326721 TGGTTGTTTTTCATTTTTTGACTTGTCATTTAATCTCAATCGTTTTCATTTTTTCACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5326786 TAATC
65 TAATC
* ** * * *
5326791 -CTGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGATTGTTTTTGTTTTCTGACTCACGAT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5326855 TTAATT
64 TTAATC
* * *** * * *** *
5326861 TTGGTCATTTTCATTTTTTGACTTACGGTTTAAT-TCCTATCGCTTTT-GTTCCCTGACTCATGA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTCG-TTTTCATTTTTTGACTCATGG
5326924 TTTAATC
63 TTTAATC
* * * * * * *
5326931 -CTGGTCATTTTTATTTTTTTGATTCGTGATTTAATCCTTGTTGTTTTCATTTTTTGACTCATGA
1 TC-GATCATTTTCA-TTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
*
5326995 TTTAATT
63 TTTAATC
* * ** * * * ** * * * * * * *
5327002 TTGGTTGTTTTCATTATCTAAGACGCGGTCTAATCGCTCGT-ATTTTGATTTTATGAGTCGTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT--CTCGTCGTTTTCATTTTTTGACTCATGGT
*
5327066 TTATTC
64 TTAATC
* ** * * * *
5327072 TC-AGTCATTTTCATTTTCTGACTTATAGTTTAATCTCGATCATTTTCATTTTCTAAC-CTATGG
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTC-ATGG
5327135 TTTAATC
63 TTTAATC
* * * * *
5327142 AT-GATCATTTTTC-TTTTTTGGAATGGTGGTTTAATCCTGGTTGTTTCCATTTTTTGACT-AGT
1 -TCGATCA-TTTTCATTTTTT-GACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCA-T
*
5327204 AGTTTAATC
61 GGTTTAATC
* * * ** ** **
5327213 TGGCTCATTTTCATTTTTTGACTCATGGCATAATCAGGATTATTTTCATTTTTTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5327278 TAATC
65 TAATC
* * * * * ** *
5327283 ATAG-TCATTTTTATTTTTTGACTCGTGGTTTAATCCCTATCATTTTC-TGTTTTTGA-TGGGTA
1 -TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCAT-TTTTTGACT-CATG
5327345 GTTTAATC
62 GTTTAATC
* * * * * * * **
5327353 CCAATCGTTTTCATTTTCTGACTTGTGGTTTAATCCTAGTCGTTTTCATTTTCTGACTTGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5327418 TAATC
65 TAATC
* * ** * * * * * * *
5327423 TAGGTTGTTTTTATTTTTTCACTCATGGTTTAATCACCGTCGTTTTCATCTTCTGACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
5327488 TAATC
65 TAATC
* * * ** *
5327493 GCGGTCATTTTCATTTTTTTGACTTGCAGTTTAATCTCGATCGTTCTTCATTTTTTGACTCGT-G
1 TCGATCATTTTCA-TTTTTTGACTCGTGGTTTAATCTCG-TCGTT-TTCATTTTTTGACTCATGG
5327557 TTTAAATC
63 TTT-AATC
* * * * * **
5327565 ACGATCATTTTCATTTCTTGACTCGTGATTTAAACCCGATCGCATTCATTTTTTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5327630 TAATC
65 TAATC
* * * * * * * * * *
5327635 TCAATCATTTT--TCTTTTTCA-T--T--TTT--T-T-ATCATTCTCATTTTCTAACTCGTAGCT
1 TCGATCATTTTCAT-TTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
5327689 TAAT-
65 TAATC
* ** * * ** *
5327693 TCCAATCATTTTCATTTCCTGATTCATGGTTTAATC-CTGTTTATTTTTCTTTTTTTGACTCATG
1 T-CGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G--TCGTTTTCATTTTTTGACTCATG
5327757 GTTTAATC
62 GTTTAATC
* * * * * * * * * * * * ** * *
5327765 T-TAGTCGTTTCCATTTTCTG-GTGCATGCTTTAATCTTAGTTGTTTTCATTATCTAAGACACGA
1 TCGA-TCATTTTCATTTTTTGACT-CGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGG
*
5327828 TCTAATCCC
63 TTTAAT--C
* * * * * *
5327837 TCG--CATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCTCACTCATAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5327900 TAATC
65 TAATC
* * * * * ** **
5327905 TCGATCATTTTCATTTTCTAACCCATGGTTTAATC-CTGATTGTTTTTTTTTTTTTGACTGGTGG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCG-TTTTCATTTTTTGACTCATGG
5327969 TTTAATC
63 TTTAATC
* ** * * * * ** *
5327976 -CTGGTTGTTTTCATTTTTTGACTTGTGATTTAATCTGGCTCATTTTCATTTCCTGACTCATGGC
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5328040 TTAATC
64 TTAATC
** * * * * *
5328046 AGGATTATTTTCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACTCATGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGT-CGTTTTCATTTTTTGACTCATGGT
5328111 TTAATC
64 TTAATC
* * * * * * ** * * **
5328117 -CTTATCTTTTTTCTTTTTTTAATTGGTATTTTAATCCCAATCGTTTTCATTTTTTGACTTGTGG
1 TC-GATC-ATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5328181 TTTAATC
63 TTTAATC
* * * * * * *
5328188 -CTGGTCTTTTTCATTTTCTGACTTGTGGTTTAATCTAGGTTGTTTTCATTTTTTGACTCACGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGT
5328252 TTAATCC
64 TTAAT-C
* * * ** * *
5328259 CCG-TCGTTTTCATCTTTTGACTCACGATTTAATCGT-GATCATTTTCATTTTTTTGACT--TGC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCG-TCGTTTTCA-TTTTTTGACTCATG-
*
5328320 GATTTAATG
62 G-TTTAATC
** * * * ** * * *
5328329 TCGATTGTTCTTCATTTTTTAACTTGTGTTTTAATGACGATCGTTTTCATTTCTTGACTCGTGAT
1 TCGATCATT-TTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5328394 TTAAAC
64 TTAATC
* *** * * * * * * *
5328400 CCGATCGCATTCATTTTCTGACTCATTGTTTAATCCCAATCATTTT--TCTTTT---TCAT--TT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5328458 T--T-
65 TAATC
* * * * * * * * * ** *
5328460 T-TATCGTTCTCATTTTCTAACTCGTAGCTTAAT-TCCAATCATTTTCATTTCCTGACTCACGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTCGTTTTCATTTTTTGACTCATGGT
5328523 TTAATC
64 TTAATC
* * * * *
5328529 TTGTTCATTTTTC-TTTTTCTGACTGGTGGTTTAATCCCGATCATTTTCATTTTTTGACTCATGG
1 TCGATCA-TTTTCATTTTT-TGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
5328593 TTTAATC
63 TTTAATC
* * * * * * * *
5328600 T-TAGTCGTTTTCATTTTCTGGCTCGTGCTTTAATCTAGGTCATTTT--TTTTTCTAACTCAAT-
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTT-TGACTC-ATG
*
5328661 GTCTAATC
62 GTTTAATC
* ** * * ** * * *
5328669 -CCACTTGTTTTCGTTTTTTGACTCATGGTTTAATC-CAGGTTATTTTTCATTTTTTAACTCGTA
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC--G-TCGTTTTCATTTTTTGACTCATG
*
5328732 CTTTAATC
62 GTTTAATC
* * * * * * * * ** * * *
5328740 -CCAGTCATTTTAATTTCTTGACTCATGATTCAAACTGGTCGCATTCATTTTCTAACTCGTGGTT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
*
5328804 TAGT-
65 TAATC
** ** *
5328808 TCCGATCATTTTTTTTTTCATTTTTTGA-TCGTTTCATTTTCTGACTCGTAGTTTAATCCCAATC
1 T-CGATCA------TTTTCATTTTTTGACTCG--TGGTTTAAT--CTCGTCG-TT--T-----TC
5328872 ATTTTCATTTTCTGACTCAAT-GTTTAATC
47 A---T--TTTT-TGACTC-ATGGTTTAATC
* * * * * * *
5328901 TC-AGTCGTTTTCCTTTTCT-AGCTAGTGGTTCAATCTCTGTCATTTTCATTTTCTGACTCGA-G
1 TCGA-TCATTTTCATTTTTTGA-CTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTC-ATG
5328963 GTTTAATC
62 GTTTAATC
* * * * * *
5328971 -CTTATCATTTTCATTTTTTGACTAGTGATTTAATCCCGGTCATTTT--TTATTTCTGACTCGTG
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATT-TTT-TGACTCATG
*
5329033 ATTTAATC
62 GTTTAATC
* * * * * * * * * *
5329041 TC-AGTCGTTGTCATTTCTTGACTCATGATTTAATC-CTGATTGTTTTCATTTCTTAACTCGTGA
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGG
*
5329104 TTTAAAC
63 TTTAATC
* ** * *
5329111 CCGATTGTATTCATTTTTTGACTCGTGGTTTAATC-CTGATCGTTTTCATTTTTTGACTTATGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGGT
5329175 TTAATC
64 TTAATC
* * * * * * * * * *
5329181 TCGGA-CGTTTTCATTTTCTAACTCGCGGTTTAATCTCGATCTTTTTTATTTTCTAACTCGTAGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5329245 TTAAT-
64 TTAATC
* * *** * * * * * * *
5329250 ACGAGTCATTTTCATTTTTTTGCCTCACAGTTTAATCCCGATCATTTCCATTTGTTAACTCCTGA
1 TCGA-TCATTTTCA-TTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
5329315 TTTAAT-
63 TTTAATC
** * * * *
5329321 TCGATCATTTT--TTGTTCTCTGACAAGTGATTTAGTTTCGGT-GGTTTCGATTTTTTGACTCAT
1 TCGATCATTTTCATT-TT-T-TGACTCGTGGTTTAATCTC-GTCGTTTTC-ATTTTTTGACTCAT
* *
5329383 GTTTTATTC
61 GGTTTAATC
* * * *
5329392 TC-ATTAGTTTTCGA-TTTTTGACAT-GTGATTTAATATCGATCATTTTCATTTCTTTGACTCAT
1 TCGATCA-TTTTC-ATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTT-TTTGACTCAT
**
5329454 CTTTTAA-C
61 GGTTTAATC
* * ** * * * * * *
5329462 GACGGTTGTTTTTCATTTTCTGACTTGTGATTTAATCTCGATCGTTTTCATTTTTTGACTTACGA
1 -TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
5329527 TTTAATC
63 TTTAATC
* * * * * *** *
5329534 TTGATCATTTTCATTTTTTGGCTCATGGTTTAATCTTGGTTGTTTTTGCTTTTTGACTCGT-GTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
*
5329598 TAATTT
65 TAA-TC
* *** * * * *** *
5329604 TCG-TCATTTTCTTTTTTTGACTTACGGTTTAAT-TCCTATCACTTTT-GTTCCCTGACTCATGA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTC-GTTTTCATTTTTTGACTCATGG
5329666 TTTAATCC
63 TTTAAT-C
* * * * * * *
5329674 TCG-TCATTTTCATTTTTTTTGATTCGTGATTTAATCTTTGTTGTTTTCATTTTCTGACTCGTGA
1 TCGATCATTTTCA--TTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGG
*
5329738 TTTAATT
63 TTTAATC
* * ** * * * * ** * * * * *
5329745 TTGGTTGTTTTTATTATCTAAGACGCGATCTAATGCCTCG-CATTTTCATTTTATGACTCATGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT--CTCGTCGTTTTCATTTTTTGACTCATGGT
*
5329809 TTATTC
64 TTAATC
* * * * * * *
5329815 T-TAGTCATTTTCATTTTCTAACTCATAGTTTAATCTCGATCATTTTCATTTTTTGAAC-CATTG
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTG-ACTCATGG
5329878 TTTAATC
63 TTTAATC
* * * * * * * **
5329885 -CTGATCGTTTTTCTTTTTTTGACTAGTGGTTTAATCCTGGTTGTTTCCATTTTTTGATTTGTGG
1 TC-GATC-ATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
5329949 TTTAATC
63 TTTAATC
* * ** * * ** ** ** *
5329956 TGGCTTGTTTTCATTTTCTGACTCATGACTTAATCAGGATTATTTTCATTTTTTGACTCGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5330021 TAATC
65 TAATC
* * * * * * **
5330026 ATAG-TCATTTTCATTTTTTGA-TGGGTAGTTTAATCCCAATCGTTTTCATTTTCTGACTTGTGG
1 -TCGATCATTTTCATTTTTTGACT-CGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5330089 TTTAATC
63 TTTAATC
* * * * ** * * * *
5330096 -CTGGTCCTTTTTATTTTCTGACTTTTGGTTTAATCTGGGTTGTTTTCATTTTTTGACTCACGAT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGT
5330160 TTAATCC
64 TTAAT-C
* * * ** ** * * **
5330167 CCG-TCGTTTTCATCTTCCGACTCAAGGTTTAATCGCGGTCGTTTT-TTTTTTCCTGACTTGTGG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTT--TGACTCATGG
5330230 TTTAATC
63 TTTAATC
* * * * * *
5330237 TCGGTCATTCTTCATTTTTTGACTCGTGCTTTAATCACGATCGTTTTCATTTCTTGACTCGTGAT
1 TCGATCATT-TTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5330302 TTAAAC
64 TTAATC
* *** * * * * * *
5330308 CCGATCGCATTCATTTTCTGACTCATGGTTTAATCCCAATCATTTT--TCTTTT---TCAT--TT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5330366 T--T-
65 TAATC
* * * * * * ** * **
5330368 T-TATCGTTCTCATTTTCTAACTCGTAGCCTAAT-TCCAGTCATTTTCATTTCCTGACTCATGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTCGTTTTCATTTTTTGACTCATGGT
5330431 TTAATC
64 TTAATC
* * * * ** *
5330437 -CTGTTCATTTTTCTTTTTTCTGACTGGGGGTTTAATCTCGGTAATTTCCATTTTTTGACTCATG
1 TC-GATCA-TTTTCATTTTT-TGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATG
5330501 GTTTAATC
62 GTTTAATC
* * * * * * * *
5330509 T-TAGTC-GTTTCAATTTTCTGGCTTGTGCTTTAATCTAGGTCATTTTC-TTTTTCTGACTCAAT
1 TCGA-TCATTTTC-ATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTT-TGACTC-AT
5330571 -GTTTAA--
61 GGTTTAATC
** * * ** *
5330577 TCGTACTTGTTTTCGTTTTCTGACTCGTGGTTTAATC-CAGGTTATTTTTCATTTTTTAACTCAT
1 TCG-A-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC--G-TCGTTTTCATTTTTTGACTCAT
**
5330641 ACTTTAATC
61 GGTTTAATC
* ** * * * * * ** * * *
5330650 -CCAGTCATTTTCATTTCATGACTCATGATTCAAACTAGTCGCATTCATTTTCTAACTCGTGGTT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
*
5330714 TAGTC
65 TAATC
** * *
5330719 TTAATCATTTT--TTTTTTCA-T--T--TTTAGA--TCGT--TTTTCATTTTTTGACTCGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTA-ATCTCGTCGTTTTCATTTTTTGACTCATGGTT
5330773 TAATCC
65 TAAT-C
* * * *
5330779 AAATC-ATTTTCGTTTTCATTTTCTGACTCAAT-TTTTAATCTCGATCGTTTTTC-TTTTTCT-A
1 ---TCGA---TCATTTTCATTTTTTGACTC-GTGGTTTAATCTCG-TCG-TTTTCATTTTT-TGA
5330840 GCT-AGTGGTTTAATC
56 -CTCA-TGGTTTAATC
* * ** * *
5330855 TCGGTCATTTTCATTTTATGACTCGTGGTTTAATCTTTATCATTTTCATTTTTTGACT-AGTGAT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCA-TGGT
5330919 TTAATC
64 TTAATC
* * * * * * *
5330925 TTGGTCATTTT-TTTATTTCTGACTCGTGATTTAATCTCAGTCGTTGTCATTTCTTGACTCATGA
1 TCGATCATTTTCATT-TTT-TGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5330989 TTTAATC
63 TTTAATC
* * ** * * * * * * * * * *
5330996 CCAATTGTTTTCATTTCTTAACTCGCGATTTAAAC-CTGATTGTATTCATATTTGGACTCGTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGGT
5331060 TTAATC
64 TTAATC
* * * * * * * * * *
5331066 -CTGGTCGTTTTCATTTTTTGACTCATGGTTTAATCTCGATCTTTTTTATTCTCTAACTCGTAGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5331130 TTAATA
64 TTAATC
* * *** * *
5331136 TGGGTCATTTTCATTTTTTGACTCACAGTTTAATCCCGATCATTTTCATTTTCATTTTTTGACTC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT--C--TC---GTCGTTTTCATTTTTTGACTC
5331201 --GGTTTAATC
59 ATGGTTTAATC
* * * * * * * *
5331210 CCGATCATTTTCATTTTTTAACTCGTGATTTAAGTTTCAATCATTTTTCATTCTCTGA--CATGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTC-GTC-GTTTTCATTTTTTGACTCATG-
* *
5331273 GATTTAGTT
62 G-TTTAATC
* ** * * * * * * * *
5331282 TCGGTGGTTTTGATTTTCTGACTCATGATTTATTCTCAGTAGTTTTCAATTTTTGAC-AAGTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCA-TGGT
*
5331346 TTAATG
64 TTAATC
* * * ** * * ** *
5331352 TCGATCATTTTCATTTCTCTGACTCATGATTTAATAACGGTTGTTTTTCATTTTCTGACTTGTGA
1 TCGATCATTTTCATTT-TTTGACTCGTGGTTTAATCTC-GTCG-TTTTCATTTTTTGACTCATGG
5331417 TTTAATC
63 TTTAATC
* * * * * * *
5331424 TTGATCGTTTTCATTTTTTGACTC--AGTTTAATCTTGATCATTTT--TTTTTT-ACTCGTGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5331484 TAATC
65 TAATC
* ** ** * ** * * * *
5331489 TCGGTTGTTTTTGTTTTCTGACTCACGATTTAATTTTGGTCATTTTCATTTTTTGACTTC-TGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGAC-TCATGGT
5331553 TTAAT-
64 TTAATC
* * * *** * * * * * *
5331558 TCCCATCGCTTTT-GTTCCCTGACTCATGTTTTAATCCTGGTCATTTTCATTTTTTTGATTCGTG
1 T-CGATC-ATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCA-TTTTTTGACTCATG
*
5331622 ATTTAATC
62 GTTTAATC
* * ** * * * * * * * ** * *
5331630 CCTATTGTTTTCATTTTTTGACTCGTGATTTAATTTTGGTTGTTTTCATTATCTAAGACGTGGTC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGTT
5331695 TAATTCC
65 TAA-T-C
* * * * *
5331702 TCG--CATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCTGACTCATAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5331765 TAATC
65 TAATC
* * * * **
5331770 TCGATCATTTTCATTTTCTGAC-CAATGGTTTAATC-CTGATCATTTTTCTTTTTTTGACTGGTG
1 TCGATCATTTTCATTTTTTGACTC-GTGGTTTAATCTC-G-TC-GTTTTCATTTTTTGACTCATG
*
5331833 CTTTAATC
62 GTTTAATC
* ** * * * * * *
5331841 -CTGGTTGTTTCCATTTTTTGACTTGCGGTTTAATCTTGCTCGTTTTCATTTTCTGACTCATGGC
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5331905 TTAA--
64 TTAATC
** * * * * *
5331909 TC-AGGA--TT-ATTTTTTGACTCATGGTTTAATCACAGTCATTTTCATTTTTTGCCTCGTGG--
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5331968 ---TC
65 TAATC
* ** * * *
5331970 -C--T--TTTTCATTTTTTTAC-CGGTGGTTTAATCCTTATCATTTT--TTTTTATG--T-GTAG
1 TCGATCATTTTCATTTTTTGACTC-GTGGTTTAAT-CTCGTCGTTTTCATTTTT-TGACTCATGG
5332024 TTTAATC
63 TTTAATC
* * * ** * * * * *
5332031 CCAATCATTTTCATTTTCTGACTTATGGTTTAATTTGGGTTGTTTTCATTTTCTGACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGTT
5332096 TAATCC
65 TAAT-C
* * * * ** * * * * * *
5332102 CCG-TCGTTTTCATCTTCTGACTCACGATTTAATCAT-GATCATTTTTATTTTTTTGACTTACGA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCG-TCGTTTTCA-TTTTTTGACTCATGG
5332165 TTTAATC
63 TTTAATC
* * ** * * * ** * * *
5332172 TCGGTCGTTCTTTTTTTTTTTACAT-GTGTTTTTATCAGGATCGTTTTCATTTCTTGACTCGTGA
1 TCGATCATT-TTCATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
*
5332236 TTTAAAC
63 TTTAATC
* *** * * * * *
5332243 CCGATCGCATTCATTTTTTGACTCATGGTTTAATCCCAATCATTTT--TCTTTT---TCAT--TT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5332301 T--T-
65 TAATC
* * * * * * * * * **
5332303 T-TATCGTTTTCATTTTCTAATTCGTAGCTTAATTCTAGTCATTTTCATTTCCTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGTT
5332367 TAATC
65 TAATC
* * * * * *
5332372 -CTGTTCATTTTTC-TTTTTCT-ACTGGTGGTTTAATCCCGGTCATTTCCATTTTCTGACTCATG
1 TC-GATCA-TTTTCATTTTT-TGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATG
5332434 GTTTAATC
62 GTTTAATC
* * * * * * * *
5332442 T-TAGTCGTTTCCATTTTTTGGCTCGTGCTTTAATGTAGGTC-ATTT--TTTTTTGACTCAAT-G
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTC-ATGG
5332502 TTTAATC
63 TTTAATC
* ** * * ** * * * **
5332509 -CCACTTGTTTTCGTTTTCTGACTCGTGGTTTAATCGAGGTTGTTTTTCATTTTTTAAATCATAC
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCG-TTTTCATTTTTTGACTCATGG
5332573 TTTAATC
63 TTTAATC
* * * * * * * * ** * * *
5332580 -CCAGTCATTTTGATTTCTTGACTCATGATTCAAACTGGTCG-TAACATTTTCTAACTCGTGGTT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
*
5332643 TAGTC
65 TAATC
* ** ** *
5332648 CCGATCAGTTTTTGTTCATTTTTTGA-TCGTTTTCATTTTTTGACTCGTGGTTTAATCCCAATCC
1 TCGATCA----TT-TTCATTTTTTGACTCG---TGGTTTAAT--CTCGTCGTTT--T--C-A---
5332712 TTTTCATTTTCTGACTCAAT-GTTTAATC
48 ---T--TTTT-TGACTC-ATGGTTTAATC
* * * * * * *
5332740 TCGGTCATTTTCCTTTTTCT-AGCTAGTGGTTTAATCTCGGCCATTTTCATTTTCTGACTCGTGG
1 TCGATCATTTTCATTTTT-TGA-CTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5332804 TTTAATC
63 TTTAATC
* * * * * * *
5332811 -CTTATCGTTTTCATTTTTTGACTAGTGATTTAATCCTGGTCATTTT--TTATTTCTGACTCGTG
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATT-TTT-TGACTCATG
*
5332873 ATTTAATC
62 GTTTAATC
* * ** * * * * * * * ** *
5332881 TC-AGTCGTTGTCATTTCCTAACTCATGATTTAATCCCGATTGTTTTCATTTCTTAACTCGCGAT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5332945 TTAAAC
64 TTAATC
* ** * * * * * *
5332951 CCGATTGTATTCATTTTTTGACTCGTGGTTTAATCCTGGTCATTTTTATTTTTTGACTCGTGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5333016 TAATC
65 TAATC
* * * * * * ** * **
5333021 TCGATCTTTTTTATTTTCTAACTTGTAGTTTAATACGGGTCATTTT-ATTTTTTGACTCACAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5333085 TAATC
65 TAATC
* * * * * * ** **
5333090 TCGATCATTTTCATTTTTTAACTCATGATTTAATTTCGGT-GCTTTAATCCTGGTTGTTTCCAAT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCAT--TTTTTGACT-C-AT
* *
5333154 -TTTTGA-C
61 GGTTTAATC
* * * * * ** ** * **
5333161 TTGCGGTTTAATCTGGCTCGTTTTCATT--TTC-T-GACTAATGGCTTATCAGGATTATTTTCAT
1 -T-C-G-ATCAT-T--TTCATTTT--TTGACTCGTGGTTTAAT--CTCGTC--G-TTTTCAT---
5333222 TTTTTGACTCATGGTTTAATC
49 TTTTTGACTCATGGTTTAATC
* * * * *
5333243 AC-AGTCATTTTCATTTTTTGACTCGTGGTTTAATCGTGGTCCTTTTTCATTTTTTTACTCGTGG
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGT-CGTTTTCATTTTTTGACTCATGG
5333307 TTTAATC
63 TTTAATC
* * * * * * * * * *
5333314 CCTATCATTTTTCTTTTTTTGA-TGGGTAGTTTAATCCCAATCATTTTCATTTTCTGACTTATGG
1 TCGATCA-TTTTCATTTTTTGACT-CGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5333378 TTTAATC
63 TTTAATC
* * ** * ** * * * * *
5333385 TGGGTTGTTTTCATTTTCTGACTCACGGTTTAATCCCCGTCGTTTTCATCTTCTGACTCACGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5333450 TAATC
65 TAATC
* * ***** * *
5333455 GCGGTCATTTTCATTTTTTTGACTTACAATTTAATCTCGGTCGTTCTTCATTTTTTGACTCGTGT
1 TCGATCATTTTCA-TTTTTTGACTCGTGGTTTAATCTC-GTCGTT-TTCATTTTTTGACTCATGG
*
5333520 TTTTATC
63 TTTAATC
* * * * ** * ** *
5333527 ACGATCGTTTTCATTTCTTGAGTCGTAATTTAAAC-CTGATCGCATTCATTTTCTGACTCATGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGGT
5333591 TTAATC
64 TTAATC
* * * * * * * * * * * *
5333597 CCAATCATTTT--TCTTTT---TCAT-ATTT--T-T-ATCGTTCTCATTTTCTAACTCGTAGCTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTTT
*
5333652 AATT
66 AATC
** ** * **
5333656 TC-AGTCATTTTCATTTCCTGACTCACGGTTTAATC-CTGTTCATTTTTC-TTTTTCTGACTGGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TC-GTTTTCATTTTT-TGACTCAT
5333718 GGTTTAATC
61 GGTTTAATC
* * * * * * * * *
5333727 CCGGTCA-TTTCTATTTTTTGACTCATGGTTTAATCTTAGTCATTTCCATTTTTTTACTCGTGCT
1 TCGATCATTTTC-ATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGT
5333791 TTAATC
64 TTAATC
* * * * * * * * *
5333797 TAGGTCATTTT--TTTTTCTGACTCAAT-GTTTAATCCCATTTGTTTTCGTTTTTTGATTCGTGG
1 TCGATCATTTTCATTTTT-TGACTC-GTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5333859 TTTAATC
63 TTTAATC
** * ** * ** * * * *
5333866 GAAGTTGTTTTTCATTTTTTAACTCGTACTTTAATCCCAGTCATTTTCATTTCTTGACTCATGAT
1 -TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
* *
5333931 TCAAAC
64 TTAATC
* ** * * * *
5333937 T-GGTC-GCTTCATTTTCTAACTCGTGGTTTAGTCTCGATCATTTT--TTTTTT-A---A---TT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5333991 T--T-
65 TAATC
* * * * * *
5333993 TCAATCATTTTCATTTTTTGACTCGTGGTGTAATCACAATCGTTTTCGTTTTCTGACTCAAT-GT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTC-ATGGT
5334057 TTAATC
64 TTAATC
* * * ** * * * *
5334063 TCGGTCGTTTTCCTTTTTCT-AGCTAATGGTTTAATCACGGTCATTTTCATTTTCTGACTCGTGG
1 TCGATCATTTTCATTTTT-TGA-CTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5334127 TTTAA-C
63 TTTAATC
* * ** * * * ** * * *
5334133 CCTTATTGTTTTAATTTTTTCACTAGTAATTTAATCCCGATCATTTT--TTATTTCTGACTCGTG
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATT-TTT-TGACTCATG
*
5334196 ATTTAATC
62 GTTTAATC
* * ** * * * * * * ** *
5334204 T-TAGTCATTGTCATTTCCTGACTCATGATTTAATCCCGATTGTTTTCATTTCTTAACTCGCGAT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5334268 TTAAAC
64 TTAATC
* ** * * *
5334274 CCGATTGTATTCATTTTTTGACTCATGGTTTAATC-CTGATCGTTTTCATTTTTTTCACTCATGG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCA-TTTTTTGACTCATGG
5334338 TTTAATC
63 TTTAATC
* * * * * **
5334345 TCGATCGTTTTCATTTTCTGACTCGCGGTTTAATCTCGATCTTTTTCATTTTCTGACTCGCGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5334410 TAATC
65 TAATC
* * * * * * ** *
5334415 TCGATCTTTTTTATTTTCTAACTTGTAGTTTAATACGGGTCATTTTCATTTTTTGACTCA--GTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5334478 TAATC
65 TAATC
* * * * * * * *
5334483 TCGATCATTTTCATTTTTTAACTCGTGATTTAATTTCGTTGATTTTTCGTTCTCT-A-ACATGTG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCG--TTTTCATTTTTTGACTCATG-G
* *
5334546 ATTTAGTT
63 -TTTAATC
* ** * * * * * *
5334554 TCGGTGGTTTTGAGTTTTTGACTCATGATTTATTCTCAGTAGTTTTCGA-TTTTTGA--CATGTG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTC-ATTTTTTGACTCATG-G
*
5334616 ATTTAATA
63 -TTTAATC
* * * * * * * ** *
5334624 TCGATCATTTTCATTTCTCTGACTCATGATTTAGTGATGGTTGTTTTTCATTTTTTGACTTGTGA
1 TCGATCATTTTCATTT-TTTGACTCGTGGTTTAAT-CTCGTCG-TTTTCATTTTTTGACTCATGG
5334689 TTTAATC
63 TTTAATC
* ** * ** * * *
5334696 TCAATTGTTTTCATTTTTTTACTCACGGTTTAATCTTGATCATTTTCATTTTTTGACTCGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5334761 TAATC
65 TAATC
* ** ** * * * * * * * *
5334766 TCGGTTGTTTTTGTTTTTTGACTCATGATTTAATTTTGGTCATTTTCATTTTTTGACTTACGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGTT
5334831 TAAT-
65 TAATC
* * * *** * * * * *
5334835 TCCCATCGCTTTT-GTTCCCT-AGCTCATGATTTAATCCTGGTCATTTTCATTTTTCTGATTCAT
1 T-CGATC-ATTTTCATTTTTTGA-CTCGTGGTTTAAT-CTCGTCGTTTTCATTTTT-TGACTCAT
*
5334898 GATTTAATCC
61 GGTTTAAT-C
* ** * * * * * * ** *
5334908 TTG-TTGTTTTCATTTTCTGACTTGTGATTTAATTTTGGTTGTTTTCATTATCTAAGACGC--GG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATT-T-TTTGACTCATGG
5334970 TTTAATCCC
63 TTTAAT--C
* * *
5334979 TCG--CATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCATTTTTTGACTC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G------TCGTTTTCATTTTTTGACTC
*
5335042 ATAGTTTAATC
59 ATGGTTTAATC
* * * **
5335053 TCGATCATTTTCAATTTTTGACCCATGGTTTAATC-CTGATCGTTTT--TTTTTT-ACTGGTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGGT
5335114 TTAATCC
64 TTAAT-C
* * * *** * * *
5335121 TGGCTGC--TTCCATTTTTTGACTTACGGTTTAATCTGGCTCATTTTCATTTTTTGACTCATGGC
1 TCGAT-CATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5335184 TTAATC
64 TTAATC
** * * * * ** *
5335190 AGGATTATTTTGATTTTTTGACTCATGGTTTAATCATAGTTATTTTCATTTTCTT-ACTCGTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTT-TTGACTCATGGT
*
5335254 CTAATC
64 TTAATC
* ** * * **
5335260 GT-GATCTTTTTTCATTTTTTTGACTCGTGGTTTAATCCTTATCATTTTTCTTTTTTTGA-TGGG
1 -TCGATC-ATTTTCA-TTTTTTGACTCGTGGTTTAAT-CTCGTC-GTTTTCATTTTTTGACT-CA
*
5335323 TAGTTTAATC
60 TGGTTTAATC
* * ** * * * *
5335333 CCAATTGTTTTCATTTTCTGACTGGTGGTTTAATCCTGGTCGTTTTCATTTTTTGACTTATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5335398 TAATC
65 TAATC
* * ** * ** * * * * * *
5335403 TAGGTTGTTTTCATTTTTTGATTCACGATTTAATCCCCGTCCTTTTCATCTTTCGACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5335468 TAATC
65 TAATC
* * *** * * * *
5335473 GCGATAATTTT--TGTTTTTGACTTACGATTTAATCTTGATCGTTCTTCATTTTTTGACTCGTGT
1 TCGATCATTTTCAT-TTTTTGACTCGTGGTTTAATCTCG-TCGTT-TTCATTTTTTGACTCATGG
5335536 TTTAATC
63 TTTAATC
* * * * * * * ** *
5335543 ACGATCGTTTTCATTTCTTGACTCATGATTTAAACCCGATCGCATTCATTTTCTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5335608 TAATC
65 TAATC
* * * * * * * * * * *
5335613 CCAATCATTTTC-TTTTTTCA-T--T--TTT--T-T-ATTGTTCTCATTTTCTAACTCGTAGCTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTTT
5335668 AAT-
66 AATC
* * ** * **
5335671 TCCAGTCATTTTCATTTTCTGACTCACGGTTTAATC-CTGTTCATTTTTC-TTTTTCTGACTGGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TC-GTTTTCATTTTT-TGACTCAT
5335734 GGTTTAATC
61 GGTTTAATC
* * * * * * *
5335743 GC-AGTCA-TTTCTATTTTTTGACTCATGGTTTAATCTTAGTCGTTTCCATTTTCTGGCTCATGC
1 TCGA-TCATTTTC-ATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGG
*
5335806 TTTAATG
63 TTTAATC
* * * * * * * * *
5335813 TAGGTCATTTT-TTTTTTCTGACTCAAT-GTTTAATCCCACTTGTTTTCGTTTTCTGACTCATGG
1 TCGATCATTTTCATTTTT-TGACTC-GTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5335876 TTTAATC
63 TTTAATC
* ** * ** * * * **
5335883 -CAGGTTGTTTTTCATTTTTTAACTCGTACTTTAATCCCAGTCATTTTCATTTCTTGACTCATTA
1 TC--GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
* *
5335947 TTCAAAC
63 TTTAATC
* * * * * ** * *
5335954 TGGTTGCA--TTCATTTTCTAACTTGTGGTTTGGTCCCGATC-ATTT--TTTTTT---TCA---T
1 TCGAT-CATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5336008 TT--T-
64 TTAATC
* * * * * * * * *
5336011 TGGATCGTTTTCATTTTCTGACTCGTGGTTTAATATCTATCATTTTCGTTTTCTGACTTAAT-GT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGAC-TCATGGT
5336075 TTAATC
64 TTAATC
* * * * * * *
5336081 TCGGTCGTTTTCCTTTTTCT-AGCTAGTGGTTTAATCTAGGTCATTTTCATTTTTTGACTCGTGG
1 TCGATCATTTTCATTTTT-TGA-CTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGG
5336145 TTTAATC
63 TTTAATC
* * * ** * * *
5336152 -CTTATCGTTTTCATTTTTTGACTAGTTATTTAATCCCGATCATTTT--TTATTTCTAACTCATG
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATT-TTT-TGACTCATG
* *
5336214 ATTTAACC
62 GTTTAATC
* * * * * * * * * * *
5336222 TC-AGTCGTTGTCATTTCTTGACTCATGATTTAATCCCGATTGTTTTCATTTCTTAACTCACGAT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5336286 TTAAAC
64 TTAATC
* ** * * * * *
5336292 CCGATTGTATTCATTTTTTGACTCGTGGTTTAATCTTGGTCGTTTTCATTTTCTGACTCACGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
5336357 TAATC
65 TAATC
* * * * * * ** *
5336362 TCGATCTTTTTTATTTTCTAACTCATAGTTTAATACGGGTCATTTTCATTTTTTGACTCA--GTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5336425 TAATC
65 TAATC
* * * * * * * * * *
5336430 CCGATCATTTTCATTTTTTAACTTGTGATTTAATTTCAGACATTTTTCGTTCTCTGA--CATGTG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTC-GTTTTCATTTTTTGACTCATG-G
* *
5336493 ATTTAGTT
63 -TTTAATC
* ** * * * * * * **
5336501 TCGGT-GGTTTCGATTTTCTGACTCATGATTTATTCTCAGTAGTTTT--TTATTTTTACATTTTG
1 TCGATCATTTTC-ATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATT-TTTTGAC-TCATG
* *
5336563 ATTTAATA
62 GTTTAATC
* * * * ** * * ** *
5336571 TTGATCATTTTCATTTCTCTGACTCATGATTTAATGACAGTTGTTTTTCATTTTCTGACTTGTGA
1 TCGATCATTTTCATTT-TTTGACTCGTGGTTTAATCTC-GTCG-TTTTCATTTTTTGACTCATGG
5336636 TTTAATC
63 TTTAATC
* * * ** * * *
5336643 TCGATCGTTTTCATTTGTTGCCTCACGGTTTAATCTTGATCATTTTCTTTTTTTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
*
5336708 TATTC
65 TAATC
* ** ** ** * * * * *
5336713 TCGGTTGTTTTTGTTTTTTGACTCACGATTTAATTTCGGTCATTTTCATTTTTTGACTTACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5336778 TAAT-
65 TAATC
* * * *** * * * * * * *
5336782 TCCCATCGCTTTT-GTTCCATGACTCATGATTTAATCTTGGTCATTTTCATTTTTTTAAT-TTGT
1 T-CGATC-ATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATG-
5336845 GATTTAATCC
62 G-TTTAAT-C
* ** * * * * * * **
5336855 TTG-TTGTTTTTATTTTTTGACTAGTGATTTAATTTTGGTTGTTTTCATTATCTAAGA-TGC--G
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATT-T-TTTGACT-CATG
*
5336916 GTCTAATCCC
62 GTTTAAT--C
* * * * *
5336926 TCG--CATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCAGTTTTTGACTCATAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5336989 TAATC
65 TAATC
* * * * ** *
5336994 TCGATCATTTTCATTTTCTGACCCGTGGTTTAATC-CTGATCGTTTTTCTTTTTTTGATTGGTGC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCG-TTTTCATTTTTTGACTCATGG
5337058 TTTAATC
63 TTTAATC
* ** * * *** * * * * *
5337065 -CTGGTTGTTTCCATTTCTTGACTTACGGTTTAATCTGGCTCATTTTCATTTTCTGACTCACGGC
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5337129 TTAATC
64 TTAATC
** * * * * * * *
5337135 AGGATTATTTTCATTTTTTGACTCATGGTTTAATCATAGCCATTTTCATTTTTTGACTCGTGGTC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
5337200 TAATC
65 TAATC
* * * * * * * ***
5337205 AT-GGTCTTTTTTCATTTTTTGACTCGTGGTTTAATCCCTATCATTTTTCTTTTTTTCA-TGGGG
1 -TCGATC-ATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTC-GTTTTCATTTTTTGACTCATG
5337268 AGTTTAATC
62 -GTTTAATC
* ** * * * * * *
5337277 -CTAATGGTTTTCATTTTCTAACTTGTGGTTTAATCTAGGTTGTTTTCATTTTTTGACTCACGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGT
5337341 TTAATC
64 TTAATC
* * * * ** * * ** *
5337347 CCCATCATTTTCATCTTTCGACTCACGGTTTAATCGCGATCATTTTCATTTTTTCGACTTGTGAT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTT-GACTCATGGT
5337412 TTAATC
64 TTAATC
* * * *
5337418 TCGGTCGTTCTTCAATTTTTGACTGACTTGCGATTTAATCTCGGTCGTTCTTCATTTTTTGACTC
1 TCGATCATT-TTCATTTTTTGACT--CGTG-G-TTTAATCTC-GTCGTT-TTCATTTTTTGACTC
*
5337483 ATGTTTTAATC
59 ATGGTTTAATC
* * * * * ** *
5337494 ACGATCGTTTTCATTTCTTGACTCGTGATTTAAACTCGATCGCATTCATTTTCTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5337559 TAATC
65 TAATC
* * * * * * * * * * *
5337564 CCAATCATTTTC-CTTTTTCA-T--T--TTT--T-T-ATCGTTCTCATTTTCTAACTCGTAGCTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTTT
5337619 AAT-
66 AATC
* ** * * * * **
5337622 TCCAGTCATTTTCATTTCCTGACTCATGGTTTAATCTTGTTCATTTTTC-TTTTTCTGATTGGTG
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TC-GTTTTCATTTTT-TGACTCATG
5337686 GTTTAATC
62 GTTTAATC
* * * * * * * * * * *
5337694 CCGGTCA-TTTCTATTTTCTAACTCATGGTTTAATCTTAGTCGTTTCCATTTCTAG-CTCGTGCT
1 TCGATCATTTTC-ATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGT
5337757 TTAATC
64 TTAATC
* * * * * * * **
5337763 TAGGTCATTTTC-TTTTTCTGACTCAAT-GTTTAATCCCACTTGTTTTCGTTTCCTGACTCATGG
1 TCGATCATTTTCATTTTT-TGACTC-GTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
*
5337826 TTTATTC
63 TTTAATC
* * * **
5337833 TC-AGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATCGATCATTTTCATTTCTCCGACTCA
1 TCGA-TCA-TTTTC-ATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTT-TTTGACTCA
* *
5337894 TGATTTAATA
60 TGGTTTAATC
* * ** * * * * *
5337904 ACGGTTGTTTTTTATTTTTCTGACTTGTGATTTAATCTCGATCGTTTTCTTTTTTTGA-ACACT-
1 TC-GATCATTTTCATTTTT-TGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCA-TG
5337967 GTTTAA--
62 GTTTAATC
* * * * * * * * *
5337973 TC-AT--TTTTTA-TTTATGACTCGTGATTTAACCTCAATCGTTGTCATTTTTTCACTTATGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5338034 TAATC
65 TAATC
* ** * * ** * * * * * *
5338039 CCGATTGTTTTCATTTCTTAACTCACGATTTAAACCCGATTGTATTCATTTTTTGACTCGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5338104 TAATC
65 TAATC
* * ** * * * * * * * * *
5338109 TTGGTCATTTTCATTTACTAACTCATGATTTAATCTCGGTCTTTTTTATTTTCTAACTCGTAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5338174 TAATAC
65 TAAT-C
* * * *** * * * ** *
5338180 -GGGTCATTTTCATTTTTTGACCCACAGTTTAATCCCGATCATTTTCATTTTTTAACTTGTGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
*
5338244 TAATT
65 TAATC
* * * * * * * * * ** * *
5338249 TTGGTCATTTTTCGTTCTCTGACAT-GTGATTTAGTTTTGGGGGTTTCGATTTTTTGACTCATGA
1 TCGATCA-TTTTCATTTTTTGAC-TCGTGGTTTAATCTCGTCGTTTTC-ATTTTTTGACTCATGG
*
5338313 TTTATTC
63 TTTAATC
* * * *
5338320 T-TAGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATCGATCATTTTCATTTCTTTGACTCA
1 TCGA-TCA-TTTTC-ATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTT-TTTGACTCA
*
5338381 TGATTTAA-C
60 TGGTTTAATC
* ** * * * * * *
5338390 AAT-GGTTGTTTTCATTTTCTGACTTGCGATTTAATCTCGATCGTTTTCGTTTTTTGACTCACGG
1 --TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
*
5338454 TTTAGTC
63 TTTAATC
* * * * * *
5338461 TTGATCATTTTCATTTTTTGACTCGTTGTTTAATCTCGGTTGTTTTTATTTTTTGACTAATGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
*
5338526 TAATT
65 TAATC
* * * *** * * * * * ** *
5338531 TTGGTCATTTTCATTTTTTGGCTTACGGTTTATTTCACATCACTTTT-GTTCCTTGACTCATGAT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTA-ATCTCGTC-GTTTTCATTTTTTGACTCATGGT
5338595 TTAATC
64 TTAATC
* * * * * * * *
5338601 -CTGGTCATTTTCATTTTTTTGATTCGTGATTTAATCCTTGTTGTTTTCATTTTCTGACTCGTGA
1 TC-GATCATTTTCA-TTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
* *
5338665 TATAATT
63 TTTAATC
* * ** * * * ** * * * * * *
5338672 TTGGTTGTTTTCATTATCTAAGACGCGGTCTAATCCCTCGT-ATTTTCATTTTATGACGCGTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT--CTCGTCGTTTTCATTTTTTGACTCATGGT
*
5338736 TTATTC
64 TTAATC
* * * * * * * *
5338742 TTAGTCATTTTCATTTTCATTTTCTGACTCATAGTTTAATCTCAATCATTTTCATTTTCTGACCC
1 -TCG--A---TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTC
5338807 ATGGTTTAATC
59 ATGGTTTAATC
* * * * * * **
5338818 -CTGATCGTTTT--TTTTTTTACT-GTTGGTTTAATCCTGGTTGTTTCCATTTTTTAACTTGTGG
1 TC-GATCATTTTCATTTTTTGACTCG-TGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
5338879 TTTAATC
63 TTTAATC
* * * * * ** **
5338886 TGGCTCGTTTTCATTTTTTGACTCATGGCTTAATCAGGATTATTTTCCATTTTTTGACTCATGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTT-CATTTTTTGACTCATGGT
5338951 TTAATC
64 TTAATC
* * * * * *
5338957 ATAG-TCATTTTCATTTTTTGACTCGTGGTCTCATCGTGGTCTTTTTTCATTTTTTGACTCGTGG
1 -TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTC-GTTTTCATTTTTTGACTCATGG
5339021 TTTAATC
63 TTTAATC
* * * * * * * * * **
5339028 -CTTATCATTTT--TTTTATG---GGTAGTTTAATCCCAATTGTTTCCATTTTCTGACTGGTGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
5339087 TTAATC
64 TTAATC
* * * * * * * *
5339093 TTGGTCGTTTTCATTTTCTGACTTGTGGTTTAATCTAGGTTGTTTTCATTTTTTGACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGTT
5339158 TAATCC
65 TAAT-C
* * * ** *** * ** ** ** *
5339164 CCG-TCCTTTTCATCTTCCGACTCACAGTTTAATCACGGTAATTTTTGTTTTTTTTGACTTGTGA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GT-CGTTTT-CATTTTTTGACTCATGG
5339228 TTTAATC
63 TTTAATC
* * * * * *
5339235 TCGATCGTTCTTCATTTTTTGACTTGTGTTTTAATCAT-GATCATTTTCATTTCTTGACTCATGA
1 TCGATCATT-TTCATTTTTTGACTCGTGGTTTAATC-TCG-TCGTTTTCATTTTTTGACTCATGG
*
5339299 TTTAAAC
63 TTTAATC
* * * * * * * *
5339306 CCGATCGA-ATTCATTTTATGACTCATGGTTTAATCCCAATCATTTT--TCTTTT---TCAT--T
1 TCGATC-ATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
5339363 TT--T-
64 TTAATC
* ** * * * * * * * *
5339366 T-TATTGTTCTCATTTTCTAACTCGTAGCTTAAT-TCCAGTCATTTTCATTTTCTGACTCACGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTCGTTTTCATTTTTTGACTCATGGT
5339429 TTAATC
64 TTAATC
* * * * *
5339435 -CTATTCATTTTTC-TTTTTCTGACTGGTGGTTTAATCCCGGTC-ATTTCTTTTTTCTGACTCAT
1 TCGA-TCA-TTTTCATTTTT-TGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTT-TGACTCAT
5339497 GGTTTAATC
61 GGTTTAATC
* * * * * * * *
5339506 T-TAGTCGTTTCCATTTTCT-AGCTCGTGCTTTAATCTAGGTCATTTT-TTTTTTCTGACTCAAT
1 TCGA-TCATTTTCATTTTTTGA-CTCGTGGTTTAATCT-CGTCGTTTTCATTTTT-TGACTC-AT
5339568 -GTTTAATC
61 GGTTTAATC
* ** * * * * * * *
5339576 -CCACTTGTTTTCGTTTTCTGACTCATGGTTTAATC-CAGGTTGTTTTTCATTTTTTAACTCGTA
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC--GTCG-TTTTCATTTTTTGACTCATG
*
5339639 CTTTAATC
62 GTTTAATC
* * * * * * * * * ** * * *
5339647 -CCAGTCATTTTTATTTCTTGACTCATGATTCAAACTGGTTGCATTCATTTTCTAACTCGTGGTT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
**
5339711 TGGTC
65 TAATC
* * * * * * *
5339716 CCGATCATTTTTTTTTCATTTTTAGA-TCGT--TTTCATTTTTTGACTCGTGGTTT-A-ATATT-
1 TCGATCA-----TTTTCATTTTTTGACTCGTGGTTT-A-ATCTCG--TCGT--TTTCATTTTTTG
* * *
5339775 AATCAT--TTTCATTT
55 ACTCATGGTTT-AATC
* * * * ** ** * * * * * *
5339789 TCTGACTCAATGTTT-A-ATCTCG-GTCGTTTTCCTTTTTCTGGCTAGTGGTTT-A-ATCTCG-G
1 TC-GA-TC-AT-TTTCATTTTTTGACTCGTGGT--TTAATCTCG-TCGT--TTTCATTTTTTGAC
* *
5339848 TCAT--TTTCATTT
57 TCATGGTTT-AATC
* * * * ** * ** * * * * ***
5339860 TCTGACTCGTGGTTTAATCCTTATCGTTTTCATTTTTTGA-CTAGT-GATTT-A-ATCCCGA-TC
1 TC-GA-TCAT--TTTCAT--TTTTTG-ACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTC
* * *
5339920 AT-TTTTTATT
59 ATGGTTTAATC
* *** * * * * *
5339930 TCTGACTCGTGATTT-A-ACCTT-AGTCGTTGTCATT-TTCTTGACTCATGATTTAATCCCGACT
1 TC-GA-TCAT--TTTCATTTTTTGACTCGTGGT--TTAATCTCG--TC--G-TTT--T--C-ATT
* *
5339991 ATTT---TCAT-TTCTTAACTC
50 TTTTGACTCATGGT-TTAA-TC
* * *
5340009 ACGATTTAAACCCAATTGTATTCAGTTTTTGACTCGTGGTTTAATCTTGGTCGTTTTCATTTTTT
1 TCGA--T-----C-A-T-T-TTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTT
* *
5340074 GACTCACGATTTAATC
54 GACTCATGGTTTAATC
* * * * * ** * **
5340090 TCGATCTTTTTTATTTTCTAACTCGTAGTTTAATACAAGTCATTTTCATTTTTTGACTCACAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5340155 TAATC
65 TAATC
* * * * * * * * * *
5340160 CCGATCATTTTCA-TTTTTGAACTTGTGATTTAATTTTGGTCATTTTCGTTCTCT-A-ACATGTG
1 TCGATCATTTTCATTTTTTG-ACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATG-G
* *
5340222 ATTTAGTT
63 -TTTAATC
** * * * * * *
5340230 TC-AGTGGTTTTGATTTTTTGACTCATGATTTATTCTCAGTAGTTTTTGA-TTTTTGA--CATGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCG-TTTTCATTTTTTGACTCATG-
*
5340291 GATTTAATA
62 G-TTTAATC
* * * * * ** * * ** *
5340300 TCGATAATTTTCATTTCTCTGACTCATGATATAATGACGGTTGTTTTTAATTTTTTGACTTGTGA
1 TCGATCATTTTCATTT-TTTGACTCGTGGTTTAATCTC-GTCG-TTTTCATTTTTTGACTCATGG
*
5340365 TGTAATC
63 TTTAATC
** * ** * * * *
5340372 TCGATGGTTTTCATTTTTTTACTCACGATTTAATC-CTGATCATTTTCATTTTTTGGCTCGTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGGT
5340436 TTAATC
64 TTAATC
* ** ** * * ** * * * * * *
5340442 TCGGTTGTTTTGGTTTTCTAACTCACGATTTAATTTTGGTCATTTTCATTTTTTGACTTACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGTT
5340507 TAAT-
65 TAATC
* * * * * * * *
5340511 TCCCATCGTTTT--TTTTCGTTGACCCATGATTTAATCCTAGTCATTTTCATTTTTTTG-CTTCG
1 T-CGATCATTTTCATTTT--TTGACTCGTGGTTTAAT-CTCGTCGTTTTCA-TTTTTTGAC-TCA
*
5340573 TGATTTAATCC
60 TGGTTTAAT-C
* ** * * * * ** * *
5340584 TTG-TTGTTTTCATTTTTTGACTCGTGATTTAATTGTGGTTGTTTTCATTATCTAAGACGC--GA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATT-T-TTTGACTCATGG
*
5340646 TCTAATCAC
63 TTTAAT--C
* * ** * *
5340655 TCG--CATTTTCATTTTATGACTCGTGGTTTATTCTCAGTAATTTTCATTTTCTGACTCATAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5340718 TAATC
65 TAATC
* * * * **
5340723 TCGATCATTTTCATTTTCTGACCCATGGTTTAATC-CTGATCGTTTTTCTTTTTTTGACTGGTGG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCG-TTTTCATTTTTTGACTCATGG
5340787 TTTAATC
63 TTTAATC
* ** * * ** * * * *
5340794 -CTGGTTGTTTCCATTTTTTGACTTGCAGTTTAATTTGGCTCGTTTTCATTTTCTGACTCATGGC
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5340858 TTAATC
64 TTAATC
** * * * * * * * *
5340864 AGGATTATTTTCATTTTTTGACTCGTGGTTTAATCCCTATCATTTTTCTTTTTTTCA-TTAGTAG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTC-GTTTTCATTTTTTGACTCA-TGG
5340928 TTTAATC
63 TTTAATC
* * * * * **
5340935 -CGAATCATTTTAATTTTCTGACTGGTGGTTTAATCCTTGTCGTTTTCATTTTCTGACTTGTGGT
1 TCG-ATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGT
5340999 TTAATC
64 TTAATC
* * ** ** * * ** * *** *
5341005 TGGGTTGTTTTCATTTTTTGACTCACGGTTTAATCCCCATCGTTTTGGTCTTCCAACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5341070 TAATC
65 TAATC
* * *** * * ** *
5341075 GCGGTCATTTTCATTTTTTTGACTTACGATTTAATTTCGGTAATTTTTCATTTTTTTTACTCATG
1 TCGATCATTTTCA-TTTTTTGACTCGTGGTTTAATCTC-GT-CGTTTTCA-TTTTTTGACTCATG
* *
5341140 TTTTTATC
62 GTTTAATC
* * * * * * * * ** *
5341148 ACGATCGTTCTCATTTCTTGACTCGTGATTTAAACCCAATCGCATTCATTTTCTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5341213 TAATC
65 TAATC
* * * * *
5341218 CCAATCATTTTTTTTCATTTTTTTA-TCGTTCTCATGTTCTAA-CTCGTAGCTTAATTCTAGTCA
1 TCGATCA----TTTTCATTTTTTGACTCG---T--GGTT-TAATCTCGTCG-TT--TTC-A-T--
* ** *
5341281 TTTTCTAACTTGTGGTTTAGTC
49 TTTT-TGACTCATGGTTTAATC
* * * * ** * ** *
5341303 CCGATCATTTTTTTCTCATTTTTCGA-TCGT--TTTCAT-T-TTC-TGACTCGTGGTTTAATCCT
1 TCGATCA----TTT-TCATTTTTTGACTCGTGGTTTAATCTCGTCGT-TTTCATTTTTTGA--CT
* * * *
5341362 AAAGGTTTTCATTTT
58 CATGG-TTT-A-ATC
* * * * * ** ** * * * *** *
5341377 TTGACTTAATGTTT-A-ATCTCGA-TCGTTTTCCTTTTTCTAGCTAGTGGTTTAATCTCGGTCAT
1 TCGA--TCAT-TTTCATTTTTTGACTCGTGGT--TTAATCTCG-TCGT--TTTCAT-TTTTTGA-
* ** *
5341439 TTTCATTTTTTGA-C
56 -CTCATGGTTTAATC
* * * * *
5341453 TCG-TGATTTAATCCTTATCGTTT---TCAGT-TTTTGA-CTAGT-GACTTAATCCCGATCATTT
1 TCGATCATTT--TCATT-T--TTTGACTC-GTGGTTTAATCTCGTCG--TT--T-----TCA---
* *
5341511 TTTATTTCTGACTCGTGATTTAATC
48 TT--TTT-TGACTCATGGTTTAATC
* * * * * * * * * * * *
5341536 TCAATCGTTGTCATTTCTTGACTCATGATTTAATCCCGATTGTTTTCATTTTTTAACTTACGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
*
5341601 TAAAC
65 TAATC
* ** * *
5341606 CCGATTGTATTCATTTTTTGACTCGTGGTTTAATCCTGGTCGTTTTCATTTTTTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5341671 TAATC
65 TAATC
* * * ** * * * * *
5341676 TCGATCGTTTTCAGTTTTTGGCTCGCAGTTTAATCTCGATCTTTTTTATTTTCTAACTCATAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
*
5341741 TAATA
65 TAATC
** * * * * * ** *** *
5341746 GGGGTCATTTTCTTTTTTTGACTTAG-GGTTTAATTCCCATCGTTTTTGTTCCCTGACTCATGAT
1 TCGATCATTTTCATTTTTTGAC-TCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGT
5341810 TTAATGC
64 TTAAT-C
* * * * * * *
5341817 T-GGTCATTTTCATTTTTCTGATTCGTGATTTAATCCTCGTTGTTTTCATTTTCTGACTCGTGAT
1 TCGATCATTTTCATTTTT-TGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGT
* *
5341881 TTACTT
64 TTAATC
* * ** ** * * * ** *
5341887 TTGGTTGTTTTCATTATCTAAGA-T-GCGGTCTAATCCCTCG-CATTTTCATTTTAAGACTCGTG
1 TCGATCATTTTCATT-T-TTTGACTCGTGGTTTAAT--CTCGTCGTTTTCATTTTTTGACTCATG
*
5341949 GTTTAGTC
62 GTTTAATC
* * ** * * * *
5341957 TCAATCATTTTCATATTTTGACTTATAGTTTAATCTCGATCATTTTCATTTTCTGACCCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5342022 TAATC
65 TAATC
* * * * * *
5342027 -CTGATCGTTTTTCTTTTTTTTGACTGGTGGTTTAATCCTGGT-TTTTTCCCTTTTTTGACT--T
1 TC-GATC-ATTTTC-ATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTT-CATTTTTTGACTCAT
5342088 GCGATTTAATC
61 G-G-TTTAATC
* * * * ** * ** ** *
5342099 -CGGCTCGTTTTAATTTTCTGACTTATGGCTTAATCAGGATTATTTTCATTTTTTTACTCATGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5342163 TTAATC
64 TTAATC
* *** * * * *
5342169 ATAG-TCATTTTCATTTTTTGACTAACGGTCTAATCGTGGTCCTTTTTCATTTTTTGACTCGTGG
1 -TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGT-CGTTTTCATTTTTTGACTCATGG
5342233 TTTAATC
63 TTTAATC
* * * * ** * * ** *
5342240 CCTATCATTTTTCTTTTTTTGA-TGGTATTTTAATCCCAATCGTTTTCATTTTTTGACTTGTCGT
1 TCGATCA-TTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
*
5342304 TTAACC
64 TTAATC
* ** * * * * * * *
5342310 CCGGCCTTTTTTATTTTCTGACTTGTGGTTTAATCTGGGTTGTTTTCATTTTTTGACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGTT
5342375 TAATC
65 TAATC
* * * * * * * *
5342380 -C-ATGCCCTTTTCATCTTTCGCCTCATGGTTTAATCGTGGTCATTTTCATTTCTTTGACTTATG
1 TCGAT--CATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTT-TTTGACTCATG
*
5342443 ATTTAATC
62 GTTTAATC
* * * * *
5342451 TCGATCGTTCTTCATTTTTTGACTCGTGTTTTAATCAT-GATCGTTTTCATTTCTTGACTCTTGA
1 TCGATCATT-TTCATTTTTTGACTCGTGGTTTAATC-TCG-TCGTTTTCATTTTTTGACTCATGG
*
5342515 TTTAAAC
63 TTTAATC
* *** * * * * * *
5342522 CCGATCGCATTCATTTTCTGACTCATGGTTTAATCCCAATCATTTT--TCTTTT---TCAT--TT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5342580 T--T-
65 TAATC
* * * * * * * * ** *
5342582 T-TATCGTTCTCATTTTCTAACTCGTAGCTTAAT-TCCAGTCATTTTCATTTCCTGACTCACGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTCGTTTTCATTTTTTGACTCATGGT
5342645 TTAATC
64 TTAATC
* * ** * * *
5342651 -CTGTTTATTTTTTTTTTTCTGACT-GCTGGTTTAATCCCGATCATTTTCATTTTCTGACTCATG
1 TC-GATCATTTTCATTTTT-TGACTCG-TGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATG
5342714 GTTTAATC
62 GTTTAATC
* * * * * * * *
5342722 T-TAGTCGTTTCCATTTTCT-AGCTCATGCTTTAATCTAGGTCATTTTC-TTTTTCTGACTCAAT
1 TCGA-TCATTTTCATTTTTTGA-CTCGTGGTTTAATCT-CGTCGTTTTCATTTTT-TGACTC-AT
5342784 -GTTTAATC
61 GGTTTAATC
* ** * * * * *
5342792 -CCACTTGTTTTCATTTTCTGACTCGTGGTTTAATC-CAGGTTGTTTTTCATTTTTTAACTCGTA
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC--GTCG-TTTTCATTTTTTGACTCATG
*
5342855 CTTTAATC
62 GTTTAATC
* * * * * * * ** * * *
5342863 -CCAGTCATTTTCATTTCTTGACTCATGATTCAAACTGGTCGCATTCATTTTCTAACTCGTGGTT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
*
5342927 TAGTC
65 TAATC
* * * ** **
5342932 -CTGATCATTTTTTTTCATTTTTTGA-TCGT--TTTCATTTTC-TAAC-TTGTGGTTTAAT-A-T
1 TC-GATCA----TTTTCATTTTTTGACTCGTGGTTT-AATCTCGT--CGTTTTCATTTTTTGACT
* * *
5342989 CAATCGTTTTCATTT
58 C-AT-GGTTT-AATC
* * * ** * ** ** * * * * **** *
5343004 TCTAACTCAATGTTT-AATCTCGGTCATTTTCCTTT-TTCTGGCTAGTGGTTTAATCCCGGTCAT
1 TC-GA-TC-AT-TTTCATTTTTTGAC-TCGTGGTTTAATCTCG-TCGT--TTTCAT-TTTTTGA-
* * *
5343067 TTTCAT-TTTCTGACTC
56 -CTCATGGTT-T-AATC
* * * * ** * * * * * * **
5343083 GTGGTTTAATCCTTATCGTTTTCATT-TTTTGACTAGTATTTA-ATC-CCGGTCATTTTTTATTT
1 -TCG----ATCATTTTCATTTT--TTGACTCG--TGGT-TTAATCTCGTC-GT-TTTCATT-TTT
*
5343145 CTGACTCATGATTTAATC
53 -TGACTCATGGTTTAATC
* * * * * * * * * * * *
5343163 TC-AGTCGTTATCATTTCTTGACTCATGATTTAATCCCGATTGTTTTCATTTCTTAACTTACGAT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5343227 TTAAAC
64 TTAATC
* ** * * * *
5343233 CCGATTGTATTCATTTTTTGACTCGTGGTTTAATCCTCATCGTTTTTATTTTTTCACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5343298 TAATC
65 TAATC
* * * * * * * * ** *
5343303 TCGGTCATTTTTATTTTCTGACTCGCGGTTTAATCTCGATCTTTTTTATTTTCTAACTTGTAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5343368 TAATAC
65 TAAT-C
* * ** * * * ** *
5343374 -GGGTCATTTTCATTTTTTGACTAATAGTTTAATCCCGATCAG-TTTCATTTTTTTAACTTGTGA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TC-GTTTTCA-TTTTTTGACTCATGG
*
5343437 TTTAATT
63 TTTAATC
* * * * * * * * * * *
5343444 TCGATCACTTTTCGTTCTCTAACAT-GTGATTTAGTTTCGATGGTTTTGATTTTCTGACTCATGA
1 TCGATCA-TTTTCATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
*
5343508 TTTATTC
63 TTTAATC
* * * * *
5343515 TC-AGT-AGTTTTCAATTTTTGACAT-GTGATTTAATTTCGATCATTTTCATTTCTCTGACTCAT
1 TCGA-TCA-TTTTCATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTT-TTTGACTCAT
* *
5343577 GATTTAATG
61 GGTTTAATC
* * ** * * * * *
5343586 ACGGTTGTTTTTCATTTTTTGACTTGTGATGTAATCTCGATGGTTTTCATTTTTTGACTCACGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5343651 TTAATC
64 TTAATC
* * ** * * * *
5343657 TTGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGATTGTTTTGGTTTTCTAACTCACGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
* *
5343722 AAATT
65 TAATC
* * * *** * * * * ** **
5343727 TTGGTCCTTTTCATTTTTTGACTTACGATTTAATTCCCATCACTTTT--TTTCGCTGACTCATAA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTC-GTTTTCATTT-TTTGACTCATGG
5343790 TTTAATC
63 TTTAATC
* * * * * * * * * *
5343797 -CTAGTCATTTTCATTTTTTTGATTCATGATTTAATCCTTGTTGTTTTTATTTTCTGACTCGTGA
1 TCGA-TCATTTTCA-TTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
5343861 TTTAAAT-
63 TTT-AATC
* * ** * ** * * * * *
5343868 TTGGTTGTTTTCATTATCTAAAAT-GCGGTCTAATCCCTCG-CATTTTCATTTTATGACTCATGG
1 TCGATCATTTTCATT-TTTTGACTCGTGGTTTAAT--CTCGTCGTTTTCATTTTTTGACTCATGG
*
5343931 TTTATTC
63 TTTAATC
* * * ** * * * *
5343938 TC-AGTAATTTTCATTTTCTGACTCATACTTTAATCTCAATCTTTTTTATTTTTTGACCCATGGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
5344002 TTAATC
64 TTAATC
* * * * * * * ***
5344008 -CTGATCGTTTTTCTTTTTTTGATTGGTGGTTTAATCCTGGTTGTTTCCATTTTTTGACTTGCGG
1 TC-GATC-ATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
5344072 TTTAATC
63 TTTAATC
* * * * ** **
5344079 T-AACTCGTTTTCATTTTTTGACTCATGGCTTAATCAGGATTATTTTCATTTTTTGACTCATGGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5344143 TTAATC
64 TTAATC
* * * * *
5344149 ATAG-TCATTTTCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTCATTTTTTGACTCGTGG
1 -TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGT-CGTTTTCATTTTTTGACTCATGG
5344213 TTTAATC
63 TTTAATC
* * ** * * * * * * * * **
5344220 CCTATCATTTTTCCCTTTTTCATTGGTAGTTTAATCCCAATCATTTTCATTTTCTGACTTGTGGT
1 TCGATCA-TTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
5344285 TTAATC
64 TTAATC
** * * * * * * *
5344291 -CTGGCCGTTTTCATTTTCTGACTTGTGGTTTAATCTGGGTTGTTTTCATTTTTTGACTCACGAT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGT
5344355 TTAATC
64 TTAATC
* * * * *** ** * * * *
5344361 CCCATCGTTTTCATCTTCCAACTCACGGTTTAATCGTGGTCATTAATTTCATTTTTTTGACTTAC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTC-GT--TTTCA-TTTTTTGACTCAT
* *
5344426 GATTTAATT
61 GGTTTAATC
* * * * * * *
5344435 TCGATCATTCTTCATTTTTTTGACTCGTGTTTTTATCACGATCATTTTCATTTCTTGACTCGTGA
1 TCGATCATT-TTCA-TTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
*
5344500 TTTAAAC
63 TTTAATC
* ** * * * * * * *
5344507 CCGATCAAATTCATTTTCTAACTCATGGTTTAATCCCAATCATTTT--TCTTTT---TCAT--TT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5344565 T--T-
65 TAATC
* * * * * * * * * ** *
5344567 T-TATCGTTCTCATTTTCTAACTCGTAGCTTAATTCTAGTCATTTTCATTTCCTGACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGTT
5344631 TAATC
65 TAATC
* * * * * * * * *
5344636 -CTGTTCATTTTTTC-TTTTTCTAACTGGCGGTTTAATCCCAATCATTTCCATTTTCTGACTCAT
1 TC-GATCA--TTTTCATTTTT-TGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCAT
5344699 GGTTTAATC
61 GGTTTAATC
* * * * * * * * * * *
5344708 T-TAGTCGTTTCCATTTTCTGGCTCGTGCTTTAATTTAGGTCATTTTC-TCTTTCTGACTCATTG
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCAT-TTTTTGACTCATGG
5344771 TTTAATC
63 TTTAATC
* ** * * * * * *
5344778 -CCACTTGTTTTCGTTTTCTGACTCGTGGTTTAATC-CAGGTTGTTTTTTATTTTTTGACTCGTA
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC--GTCG-TTTTCATTTTTTGACTCATG
*
5344841 TTTTAATC
62 GTTTAATC
* * * * * * * ** * *
5344849 -CCAGTCATTTTCATTTCTTGACTCATGATTCAAACTAGTCGCATTCATTTTCTAACTCATGGTT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
*
5344913 TAGTC
65 TAATC
* * ** * ** * * *
5344918 CCGATCATTTTTTTTTTCATTTTTTGA-TCGT--TTTCAT-TTTTTG-ACTC-TTGGTTTAATCC
1 TCGATCA------TTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATT-TTTTGA-CT
* ** *
5344977 CAATCGTTTTCCTTT
58 C-AT-GGTTT-AATC
* * * * ** * * * * *
5344992 TCTGACTCAATGTTT-A-ATCTCGA-TCGCT-TTCCTTTTTCTAGCTAGTGGTTT-A-ATCTCG-
1 TC-GA-TC-AT-TTTCATTTTTTGACTCG-TGGT--TTAATCTCG-TCGT--TTTCATTTTTTGA
* * *
5345050 GTCAT--TTTCATTT
56 CTCATGGTTT-AATC
* * * * * *
5345063 TCTGACTCATGGTTTAATTCTTATTGTTCTCACT-TTTTGA-CTAGT-GATTTAATCCCGGTCAT
1 TC-GA-TCAT--TTTCATT-TT-TTG-ACTC-GTGGTTTAATCTCGTCG--TT--T-----TCAT
* *
5345125 TTTTTATTTTTGACTCGTGATTTAATC
49 TTTT------TGACTCATGGTTTAATC
* * * * * * * * * * *
5345152 TC-AGTCGTTGTCATTTCTTGACTCATGATTTATTC-CTGATTGTTTTCATTTCTTAACTCGTGA
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGG
*
5345215 TTTAAAC
63 TTTAATC
* * * *
5345222 CCGATCATATTCATTTTTTGACTCGTGATTTAATCCTGGTCGTTTTCATTTTTTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5345287 TAATC
65 TAATC
* * * * * * * * *
5345292 TCGATCGTTTTCATTTTTTGACTCGCGGTTTAATCTCGATCTTTTTTATTATCTAACTCGTAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5345357 TAATAC
65 TAAT-C
* * *** * * * **
5345363 -GGGTCATTTTCATTTTTTGACTCGCAATTTAATCCCGGTCATTTTCATTTTTTAACTTGTGAG-
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATG-GT
*
5345426 TTAATT
64 TTAATC
* * * * * * * * *
5345432 TC-AGTCATTTTTCATTCTCTGACAT-GTGATTTAGTTTCGGTGGTTTTGATTTTCTGACTCACG
1 TCGA-TCA-TTTTCATTTTTTGAC-TCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATG
* *
5345495 ATTTATTC
62 GTTTAATC
* *
5345503 TC-AGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATCGATCGTTTTCATTTCTTTGACTCA
1 TCGA-TCA-TTTTC-ATTTTTTGAC-TCGTGGTTTAATCTCG-TCGTTTTCATTT-TTTGACTCA
* *
5345564 TGATTTAATG
60 TGGTTTAATC
* ** * * * * * *
5345574 ACGATTTTTTTTTCATTTTTTGATTTGTGATTTAATCTCGATCGTTTTCTTTTTTTGACTTACGG
1 TCGA--TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGG
5345639 TTTAATC
63 TTTAATC
* * * * * * *
5345646 -CTGATCATTTTCATTTTTTGGCTCATGGTTTAATCTTGGTTGTTTTTATTTTTTGACTCACGAT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGT
*
5345710 TTAATT
64 TTAATC
* * *** * * * * *** *
5345716 TTGGTCATTTTCATTTTTTGACTTACGATTTAATTCCCATCGCTTTT-GTTCGCTGACTCATGAT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCG-TTTTCATTTTTTGACTCATGGT
5345780 TTAATC
64 TTAATC
* * * * * * *
5345786 -CTGGTCATTTTCATTTTTTTGATTCGTGATTTAATCCTTGTTGTTTTCATTTTTTGACTCGT-A
1 TC-GATCATTTTCA-TTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
*
5345849 TTTAATT
63 TTTAATC
* * * * * ** * * * * * * *
5345856 TTGGT--TGTTTCATTATCTAAAACGCGATCTAATCCCTCGT-ATTTTCATTTTATGACTCGTGA
1 TCGATCAT-TTTCATTTTTTGACTCGTGGTTTAAT--CTCGTCGTTTTCATTTTTTGACTCATGG
* *
5345918 TTTATTT
63 TTTAATC
* * * * * * * *
5345925 TC-AGTAATTTTCATTTTCTAACTCATAGTTTAATCTTGATCATTTTCATTTTCTGAC-CAATGG
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTC-ATGG
5345988 TTTAATC
63 TTTAATC
* * * * * * * *
5345995 -CTGATCGTTTTTCTTTTTTTGACTAGTGGTTTAATCCTGGTTGTTTCCATTTTTTGACTTATAG
1 TC-GATC-ATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
*
5346059 TTTAATG
63 TTTAATC
* ** * ** * * * ** **
5346066 TAGCCCGTTTTCATTTTCAGACCCATGGCTTAATCAGGATTATTTTCATTTTTTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5346131 TAATC
65 TAATC
* * * * * * *
5346136 ATAG-TCGTTTTCATTTTTTAACTCGTGGTCTAATCGTGGTCCTTTTTCATTTTTTGACTCGTGG
1 -TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGT-CGTTTTCATTTTTTGACTCATGG
5346200 TTTAATC
63 TTTAATC
* * * * * * * * *
5346207 GCTATCATTTTTCATTTTTTCATTGGTAGTTTAATCCCAATCGTTTTCATTTTTTGACTCATGGC
1 TCGATCA-TTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
5346272 TTAATC
64 TTAATC
* * ** * * * * * *
5346278 TCGATCGTTTTCATTTTTTGGCTCGCAGATTAATCTCGATCTTTTTTATTTTTTAACTTATAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
*
5346343 TAATA
65 TAATC
** * *** * * * *** * *
5346348 GAGGTCATTTTCATTTTTTGACTTACGGTTTAATTCCCATCGCTTTT-GTTCCCTGACTCACGAT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCG-TTTTCATTTTTTGACTCATGGT
5346412 TTAATC
64 TTAATC
* * * * * * * * * *
5346418 -CTAGTCATTTTTATTTTTCTAATTCATGATTTAATCCTCGTTGTTTTCATTTTCTGACTCGTGA
1 TCGA-TCATTTTCATTTTT-TGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
*
5346482 TTTAATT
63 TTTAATC
* * ** * * * *** * * ** *
5346489 TTGGTTGTTTTCATTATCTGAGAT-GCAATCTAATCCCTCGT-ATTTTCATTTTAAGACTCGTGG
1 TCGATCATTTTCATTTTTTGA-CTCGTGGTTTAAT--CTCGTCGTTTTCATTTTTTGACTCATGG
* *
5346552 TTTATTT
63 TTTAATC
* * * * * *
5346559 TC-AGTCATTTTCATTTTCTGACTCATAGTTTAATCTCGATCATTTTCATTTTCTGACCCATGGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5346623 TTAATC
64 TTAATC
* * * * * * * * ***
5346629 -CTGATCGTTTTTCTTTTTTTGACTGGTGATTTAATCCTGGTTGTTTCCATTTTTTAACTTGCGG
1 TC-GATC-ATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGG
5346693 TTTAATC
63 TTTAATC
* * * * * * ** ** *
5346700 -CGGCTCGTTTTAATTTTCTGACTCATGGCTTAATCAGGATTATTTTCATTTTTTGACTCGTGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5346764 CTAATC
64 TTAATC
* * * * * * ** *
5346770 GT-GGTCCTTTTTCATTTTTTGACTCGTGGTTTAATCCCTATCATTTTTCTTTTTTTGA-TGGTA
1 -TCGAT-CATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTC-GTTTTCATTTTTTGACTCATG
*
5346833 TTTTAATC
62 GTTTAATC
* * * ** * * * * **
5346841 CCAATCATTTTCATTTTTTGACTTGTCATTTAATCCCGACCGTTTTTATTTTCTGACTTGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5346906 TAATC
65 TAATC
* * ** * ** * * * * ** *
5346911 TGGGTTGTTTTCACTTTTTGACTCACGGTTGAATCCTTGTCCTTTTCATATTTCAACTCACGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5346976 TAATC
65 TAATC
* * ** * * * * * *
5346981 GCGGTCATTTTCATTTTTTTGACTTATGATTTAATCACGATCATTTTCATTTCTTGACTCGTGAT
1 TCGATCATTTTCA-TTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5347046 TTAAAC
64 TTAATC
* *** * * * * * * *
5347052 CCGATCGCATTCATTTTCTGGCTCATGGTTTAATCCCAATCATTTT--TCTTTT---TCAT--TT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5347110 T--T-
65 TAATC
* * * * * * * * *
5347112 T-TATCGTTCTCATTTTCTAACTCGTAGCTTAAT-TCCAGTCATTTTCATTTTTTGACTCATAGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTCGTTTTCATTTTTTGACTCATGGT
5347175 TTAATC
64 TTAATC
* * * * * ** *
5347181 TCGATCATTTTCATTTTCTGACCCATGGTTTAATC-CTGATCGTTTTTCTTTTTTTGATTGGTGC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCG-TTTTCATTTTTTGACTCATGG
5347245 TTTAATC
63 TTTAATC
* ** * *** * * * * *
5347252 -CTGGTTGTTTCCATTTTTTGACTTACGGTTTAATCTGGCTCATTTTCATTTTCTGACTCACGGC
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5347316 TTAATC
64 TTAATC
** * * * * * * *
5347322 AGGATTATTTTCATTTTTTGACTCATGGTTTAATCATAGCCATTTTCATTTTTTGACTCGTGGTC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
5347387 TAATC
65 TAATC
* * * * * * * ***
5347392 AT-GGTCCTTTTTCATTTTTTGACTCGTGGTTTAATCCCTATCATTTTTCTTTTTTTCA-TGGGG
1 -TCGAT-CATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTC-GTTTTCATTTTTTGACTCATG
5347455 AGTTTAATC
62 -GTTTAATC
* ** * * * * * * *
5347464 -CTAATGGTTTTCATTTTCTAACTTGCGGTTTAATCTATGTTGTTTTCATTTTTTGACTCACGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGT
5347528 TTAATC
64 TTAATC
* * * * * * * *
5347534 CCCATCGTTTTCATCTTTCGACTCATGGTTTAATCGCGATCATTTTCATTTTTTCGACT--TGCG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTT-GACTCATG-G
5347597 ATTTAATC
63 -TTTAATC
* * * * * * *
5347605 TCGGTCGTTCTTCATTTTTTGACTCGTGTTTTAATCACGATCGTTTTCATTTCTTGACTCGTGAT
1 TCGATCATT-TTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5347670 TTAAAC
64 TTAATC
* *** * * * * * * **
5347676 CCGATCGCATTCATTTTCTGACT-ATGGTTTAATCCCAATCATTTT--TCTTTT---TCATTTTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
*
5347735 TTATC
65 TAATC
* * * * * **
5347740 ATTC--TCATTTTC-T-----AACTCGTAGCTTAAT-TCCAATCATTTTCATTTCCTGACTCATG
1 --TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-C-GTCGTTTTCATTTTTTGACTCATG
5347796 GTTTAATC
62 GTTTAATC
* * * * * * *
5347804 -CTGTTCATTTTTCTTTTTTTGATTGGTGGTTTAATCCCAGTC-ATTTCTATTTTCTGACTCATG
1 TC-GATCA-TTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTC-ATTTTTTGACTCATG
5347867 GTTTAATC
62 GTTTAATC
* * * * * * * *
5347875 T-TAGTCGTTTCCA-TTTCTGGCTCGTGCTTTAATCTAGGTCATTTT--TTTTTCTGACTCAAT-
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTT-TGACTC-ATG
5347935 GTTTAATC
62 GTTTAATC
* ** * ** * * * *
5347943 -CCACTTGTTTTCGTTTCCTGACTCATTGTTTATTCTCAGTAGTTTTCGA-TTTTTGA--CATGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTC-ATTTTTTGACTCATG-
*
5348004 GATTTAATA
62 G-TTTAATC
* * * * * **
5348013 TCGATCATTTTCATTTCTCTGACTCATGATTTAATAACT-GTTGTTTTTCATTTTCTGACTTGTG
1 TCGATCATTTTCATTT-TTTGACTCGTGGTTTAAT--CTCGTCG-TTTTCATTTTTTGACTCATG
*
5348077 ATTTAATC
62 GTTTAATC
* * * * * * *
5348085 TCGATCGTTTTCTTTTTTTGAACAC--AGTTTAATCAT--T--TTTTTA-TTTTTGACTCGTGAT
1 TCGATCATTTTCATTTTTTG-ACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGT
5348143 TTAA-C
64 TTAATC
* * * * * * * * * * *
5348148 -CCAGTCGTTGTCATTTCTTGACTCATGATTTAATCTCGATTGTTTTCATTTCTTAACTCACGAT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
*
5348212 TTAAAC
64 TTAATC
* ** * * ** * *
5348218 CCGATTGTATTCATTTTTTGACTCGTGGTTTAATCCTGGTCGTTTTCATTTACTAACTCATGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5348283 TAATC
65 TAATC
* * * * * * ** * **
5348288 TCAATCTTTTTTATTTTCTAACTCGTAGTTTAATACGGGTCATTTTCATTTTTTGACTCACAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5348353 TAATC
65 TAATC
* * * * * * * * * *
5348358 CCGATCATTTTCATTTTTTAACTTGTGATTTAATTTTGGTCATTTTTCGTTCTCTGA--CATGTG
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTC-GTTTTCATTTTTTGACTCATG-G
* *
5348421 ATTTAGTT
63 -TTTAATC
**** * * * * * *
5348429 TCG-GGGGTTTCGATTTTCTGACTCATGATTTATTCTCAGTAGTTTTCAATTTTTGA--CATGTG
1 TCGATCATTTTC-ATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATG-G
*
5348491 ATTTAATA
63 -TTTAATC
* * * * * * * ** *
5348499 TCGATCATTTTCATTTCTCTGACTCATGATTTAA-CGATGGTTGTTTTAATTTTCTGACTTGTGA
1 TCGATCATTTTCATTT-TTTGACTCGTGGTTTAATC--TCGTCGTTTTCATTTTTTGACTCATGG
5348563 TTTAATC
63 TTTAATC
* ** * * * *
5348570 TCGATCGTTTTCATTTTTTGACTCACGGTTTAGTCTTGATCATTTTCATTTTTTGACTCGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5348635 TAATC
65 TAATC
* ** * * * * * * * * * *
5348640 TCGGTTGTTTTTATTTTTTGACTCATGATTTAATTTTGGTCATTTTCATTTTTTGGCTTACGATT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGTT
*
5348705 T-ATT
65 TAATC
* * ** * * * * * *
5348709 TCCCATCACTTTT-GTTCCTTGACTCATGATTTAATCCTAGTCATTTTCATTTTTTTGATTCGTG
1 T-CGATCA-TTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCA-TTTTTTGACTCATG
*
5348773 ATTTAATC
62 GTTTAATC
* ** * * * * * ** *
5348781 ATTG-TTGTTTTCATTTTTTGACTCGTGATATAATTTTGGTTGTTTTCATTATCTAAGACGC--G
1 -TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATT-T-TTTGACTCATG
*
5348843 GTCTAATCCC
62 GTTTAAT--C
* * * * *
5348853 TC-AT-ATTTTCATTTTATGACTCGTGATTTATTCTTAGTCATTTTCATTTTCATTTTCTGACTC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCA---T--TTTT-TGACTC
*
5348916 ATAGTTTAATC
59 ATGGTTTAATC
* * * * * ** * **
5348927 TCGATCATTTTCATTTTCTAACCCATGGTTTAATC-CTGATCATTTTTTTTTTTTTACTGTTGGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TCGTTTTCATTTTTTGACTCATGGT
5348991 TTAATC
64 TTAATC
* ** * * ** * *
5348997 -CTGGTTGTTTCCATTTTTTAACTTATGGTTTAATCTGGCTCGTTTTCATTTTTTGACTCATGGC
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGT
5349061 TTAATC
64 TTAATC
** * * * * * * *
5349067 AAGATTATTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTCATTTTCTGACTCGTGGTC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
5349132 TAATC
65 TAATC
* * ** * * *
5349137 GT-GGTCTTTTTTCATTTTTTGACTCGTGGTTTAATCCTTATCATTTT--TTTTGATGGCT-A--
1 -TCGATC-ATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTT-TTGACTCATG
5349196 GTTTAATC
62 GTTTAATC
* * ** * * * * * * **
5349204 CCAATTGTTTCCATTTTCTAACTGGTGGTTTAATCCTGGTCGTTTTCATTTTCTGACTTGTGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5349269 TAATC
65 TAATC
* * ** ** * * * ** **
5349274 TAGGTTGTTTTCATTTTTTGACTCACGGTTTAATCCCTGTCCTTTTCATCTTCCGACTCACAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5349339 TAATC
65 TAATC
* * * * * **
5349344 AC-AGTAATTTTTATTTTTTTGACTTGTGATTTAATCTCGGTCGTTCTTCATTTTTTGACTTGTG
1 TCGA-TCATTTTCA-TTTTTTGACTCGTGGTTTAATCTC-GTCGTT-TTCATTTTTTGACTCATG
*
5349408 TTTTAATCC
62 GTTTAAT-C
* * * * * * * ** *
5349417 ACGATCGTTTTCA-TTCTTGACTCATGATTTAAACCCGATCGAATTCATTTTATGACTCAT-GTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5349480 TAATC
65 TAATC
* * * * * * * * *
5349485 CCAATCATTTTC-TTTTTTCA-T--T--TTTTAT-T-GT--TCTT-ATTTTCT-ACTGCGTAGCT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACT-CATGGTT
5349538 T-AT-
65 TAATC
* ** ** * * **
5349541 TCCAGTCATTTTCA-TTTTTGACTCACGGTTTAATCCTATTCATTTTCCTTTTTCTGACTGGTGG
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTT-TGACTCATGG
5349605 TTTAATC
63 TTTAATC
* * * * * *
5349612 TCGATCATTTT-TTTTTTTGGACTC-T--TTTAATCTTAGTCGTTTCCATTTTCT-AGCTCGTGC
1 TCGATCATTTTCATTTTTT-GACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGA-CTCATGG
*
5349672 TTTCATC
63 TTTAATC
* * * ** * *
5349679 TAGGTCATTTTC-TTTTTCTGACTCAAT-GTTTAATC-C--CACTTTCGTTTTCTGACTCATGGT
1 TCGATCATTTTCATTTTT-TGACTC-GTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGT
5349739 TTAATC
64 TTAATC
* ** * ** * * * *
5349745 -CAGGTTGTTTTTTCATTTTTTAACTCGTACTTTAATCGCAGTCATTTTTATTTCTTGACTCATG
1 TC--GAT-CATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATG
* * *
5349809 ATTCAAAC
62 GTTTAATC
* * * * ** * * *
5349817 TGGTTGCA--TTCATTTTCTAACTCGTGGTTTGGTC-C--CG--ATCATTTTTT--TTCAT-TTT
1 TCGAT-CATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
5349872 TAATC
65 TAATC
** ** * * ** ** *
5349877 GT-TTTCATTTT--TTTGACTCA-TGGTTTAATATTAATCATTTTCATTTTC------TGACTCA
1 -TCGATCATTTTCATTT-TTTGACTCG--TGGT-TTAATC-TCGTCGTTTTCATTTTTTGACTC-
5349932 AT-GTTTAATC
59 ATGGTTTAATC
* * * * * * *
5349942 TCGGTCGTTTTCCTTTTTCTGGCTAGTGGTTTAATCTCGGTCATTTTCATTTTTTGACTCGTGGT
1 TCGATCATTTTCATTTTT-TGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
5350007 TTAATC
64 TTAATC
* * * * * * *
5350013 -CTTATCGTTTTCATTTTTTGACTAGTGATTTAATCCCGATCATTTT--TTATTTCTGACTCGTG
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATT-TTT-TGACTCATG
* *
5350075 ATTTAACC
62 GTTTAATC
* * * * * * * * * *
5350083 TC-AGTCGTTGTCATTTCTTGACTCATGATTTAATCCCGACTGTTTTC-TTTTCTTAACTCACGA
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTC-GTTTTCATTTT-TTGACTCATGG
*
5350146 TTTAAAC
63 TTTAATC
** * * * * *
5350153 -CTGATTGTATTCATTTTTTGACTCGTGGTTTAATCTTGGTCGTTTTCATTTTCTGACTCACGAT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGT
5350217 TTAATC
64 TTAATC
* * * * * * ** * **
5350223 TTGATCTTTTTTATTTTCTAACTCGTAGTTTAATACAAGTCATTTTCATTTTTTGACTCACAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCATGGTT
5350288 TAATC
65 TAATC
* * * * * * * * * * *
5350293 CCGATCATTTTCATTTTTTAACTTGTGATTTAATTTTGGTCATTTTCGTTCTCT-A-ACATGTGA
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATG-G-
* *
5350356 TTTAGTT
63 TTTAATC
* ** * * * * * **
5350363 TCGGT-GGTTTCGATTTTCTGACTCATGATTTATTCTCAGTAGTTTTCGATTTTTT-ACATTTTG
1 TCGATCATTTTC-ATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTC-ATTTTTTGAC-TCATG
* *
5350426 ATTTAATA
62 GTTTAATC
* * * * * * * * ** *
5350434 TTGATCATTTTCATTTCTCTGACTCATGATTTAGAGAC-GGTTGTTTTTCATTTTCTGACTTGTT
1 TCGATCATTTTCATTT-TTTGACTCGTGGTTTA-A-TCTCGTCG-TTTTCATTTTTTGACTCATG
*
5350498 ATTTAATC
62 GTTTAATC
* * * ** * * *
5350506 TCAATCGTTTTCATTTTTTGACTCATGGTTTAATCTTTATCATTTTCATTTTTTGACTCGTCGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
5350571 TAATC
65 TAATC
** ** ** * * * * * *
5350576 TC-AGTTGTTTTTGTTTTTTGACTCACGATTTAATTTTGGTCATTTTCATTTTTTGACTTACGGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATGGT
*
5350640 TT-ATT
64 TTAATC
* * * *** * * * * * **
5350645 TCCCATCGCTTTT-GTTCCCTGACTCATGATTTAATCCTGGTCATTTTCATTTTTTTGATTTGTG
1 T-CGATC-ATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCA-TTTTTTGACTCATG
*
5350709 ATTTAATCC
62 GTTTAAT-C
* ** * * * * * * * * **
5350718 TTG-TTGTTTTTATTTTTTGACTTGTGATTTAATTTTGGTTGTTTTCATTATCT-A-AGATGCGT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAA-TCTCGTCGTTTTCATTTTTTGACTCATG-GT
5350780 TCTAATCCC
64 T-TAAT--C
* * * * * *
5350789 TCG--CATTTTCATTTTATGAGTCGTGATTTATTCTCAGTCATTTTCATTTTTTGACTCATAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGTT
5350852 TAATC
65 TAATC
* * * * * * * ** *
5350857 TCGATCATTTTCATTTTCTGACCCATGGATTAATC-CTGATCATTTTTCTTTTTTTGATTGGTGC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TC-GTTTTCATTTTTTGACTCATGG
5350921 TTTAATC
63 TTTAATC
* * * * * *
5350928 -CTGGT--TGTTTCTATTTTTTGACTTGTGGTTTAATCTGGCTCATTTTCATTTTCTGACTCATA
1 TC-GATCAT-TTTC-ATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATG
*
5350990 GCTTAATC
62 GTTTAATC
** * * * * * * *
5350998 AGGATTATTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTCATTTTTTGACTCGTGATC
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGTT
5351063 TAATC
65 TAATC
* * * ** * **
5351068 GT-GGTCCTTTTTCATTTTTTGACTCGTGATTTAATCCTTATCATTTTTGTTTTTT---TCATGG
1 -TCGAT-CATTTTCATTTTTTGACTCGTGGTTTAAT-CTCGTCGTTTTCATTTTTTGACTCAT--
5351129 GGAGTTTAATC
61 -G-GTTTAATC
* * ** * * * * **
5351140 CCAATGGTTTTCATTTTCTGACTTGTGGTTTAATCTGGGTTGTTTTCATTTTTTGACTCACAGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCT-CGTCGTTTTCATTTTTTGACTCATGGTT
5351205 TAATC
65 TAATC
* * ** ** * * * ** *
5351210 CCTG-TCATTTTCATCTTCCGACTCACGGTTTAATCGCGGTCATTTTCATCTTCCGACTCACGGT
1 TC-GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGGT
5351274 TTAATC
64 TTAATC
* * *** * * *
5351280 GCGGTCATTTTCATTTTTTTGACTTACGATTTAATCTCGGTCGTTTTTCATTTTTTGACTCGTGT
1 TCGATCATTTTCA-TTTTTTGACTCGTGGTTTAATCTC-GTCG-TTTTCATTTTTTGACTCATGG
5351345 TTTAATC
63 TTTAATC
* * * * * * ** *
5351352 ACGATCATTGTCATTTCTTGACTCGTGATTTAAACCCGATCGCATTCATTTTCTGACTCATGGTT
1 TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCG-TCGTTTTCATTTTTTGACTCATGGTT
5351417 TAATC
65 TAATC
* * * * * * * * * *
5351422 CCAATCATTTT--TCTTTTTCA-T--T--TTT--T-T-ATCGTTCTCATTTTCTAACTCGTAGCT
1 TCGATCATTTTCAT-TTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTT
5351476 TAAT-
65 TAATC
* ** * * **
5351480 TCTAGTCATTTTCATTTCCTGACTCATGGTTTAATC-CTGTTCATTTTTC-TTTTTCTGACTGGT
1 TCGA-TCATTTTCATTTTTTGACTCGTGGTTTAATCTC-G-TC-GTTTTCATTTTT-TGACTCAT
5351543 GGTTTAATC
61 GGTTTAATC
* * * * * * * *
5351552 TCGATCA-TTTCTATTTTCTGACTCATGGTTTAATCTTAGTCGTTTCCA-TTTCTGGCTCGTGCT
1 TCGATCATTTTC-ATTTTTTGACTCGTGGTTTAATC-TCGTCGTTTTCATTTTTTGACTCATGGT
5351615 TTAATC
64 TTAATC
* * * * * * * ** *
5351621 TAGGTCATTTTC-TTTTTCTGACTCAAT-GTTTAACCCCACTTGTTTTTGTTTTCTGACTCATGG
1 TCGATCATTTTCATTTTT-TGACTC-GTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATGG
5351684 TTTAATC
63 TTTAATC
* ** * ** * * *
5351691 -CAGGTTGTTTTTCATTTTTTAACTCGTACTTTAATCGCAGTCATTTTCATTTCTTGACTCATG
1 TC--GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC-GTCGTTTTCATTTTTTGACTCATG
5351754 ATTCAAACTG
Statistics
Matches: 18288, Mismatches: 5486, Indels: 3651
0.67 0.20 0.13
Matches are distributed among these distances:
56 10 0.00
57 31 0.00
58 75 0.00
59 429 0.02
60 67 0.00
61 60 0.00
62 21 0.00
63 88 0.00
64 154 0.01
65 164 0.01
66 144 0.01
67 207 0.01
68 482 0.03
69 909 0.05
70 8153 0.45
71 4579 0.25
72 1428 0.08
73 294 0.02
74 179 0.01
75 109 0.01
76 231 0.01
77 73 0.00
78 38 0.00
79 31 0.00
80 25 0.00
81 37 0.00
82 48 0.00
83 30 0.00
84 23 0.00
85 44 0.00
86 33 0.00
87 21 0.00
88 10 0.00
89 17 0.00
90 3 0.00
91 7 0.00
92 31 0.00
93 3 0.00
ACGTcount: A:0.19, C:0.18, G:0.13, T:0.50
Consensus pattern (69 bp):
TCGATCATTTTCATTTTTTGACTCGTGGTTTAATCTCGTCGTTTTCATTTTTTGACTCATGGTTT
AATC
Found at i:5326678 original size:37 final size:35
Alignment explanation
Indices: 5326595--5326680 Score: 86
Period size: 37 Copynumber: 2.4 Consensus size: 35
5326585 TTTCGTTCTC
*
5326595 TGACATGTGATTTAGTTTCGGTGGTTTTGATTTTT
1 TGACATGTGATTTAGTTTCAGTGGTTTTGATTTTT
* * *
5326630 TGAC-TCATGATTTA-TTCTCAGTAGTTTTTTTATTTTT
1 TGACAT-GTGATTTAGTT-TCAGT-G-GTTTTGATTTTT
5326667 TGACATGTGATTTA
1 TGACATGTGATTTA
5326681 ATATCGATCA
Statistics
Matches: 41, Mismatches: 5, Indels: 8
0.76 0.09 0.15
Matches are distributed among these distances:
34 3 0.07
35 15 0.37
36 1 0.02
37 21 0.51
38 1 0.02
ACGTcount: A:0.19, C:0.08, G:0.19, T:0.55
Consensus pattern (35 bp):
TGACATGTGATTTAGTTTCAGTGGTTTTGATTTTT
Found at i:5327194 original size:141 final size:140
Alignment explanation
Indices: 5327049--5327318 Score: 312
Period size: 141 Copynumber: 1.9 Consensus size: 140
5327039 TCGTATTTTG
* * * * * ** *
5327049 ATTTTATGAGTCGTGGTTTATTCTCAG-TCATTTTCATTTTCTGACTTATAGTTTAATCTCGATC
1 ATTTTATGACTAGTAGTTTAATCT-AGCTCATTTTCATTTTCTGACTCATAGCATAATCACGATC
* *
5327113 ATTTTCATTTTCTAAC-CTATGGTTTAATCAT-GATCATTTTTCTTTTTTGGAATGGTGGTTTAA
65 ATTTTCATTTTCTAACTC-ATGGTTTAATCATAG-TCATTTTTATTTTTT-GAATCGTGGTTTAA
5327176 TCCTGGTTGTTTCC
127 TCCTGGTTGTTTCC
* * * * * *
5327190 ATTTTTTGACTAGTAGTTTAATCTGGCTCATTTTCATTTTTTGACTCATGGCATAATCAGGATTA
1 ATTTTATGACTAGTAGTTTAATCTAGCTCATTTTCATTTTCTGACTCATAGCATAATCACGATCA
* * *
5327255 TTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTTATTTTTTGACTCGTGGTTTAATCC
66 TTTTCATTTTCTAACTCATGGTTTAATCATAGTCATTTTTATTTTTTGAATCGTGGTTTAATCC
5327319 CTATCATTTT
Statistics
Matches: 107, Mismatches: 19, Indels: 7
0.80 0.14 0.05
Matches are distributed among these distances:
140 16 0.15
141 89 0.83
142 2 0.02
ACGTcount: A:0.20, C:0.14, G:0.14, T:0.51
Consensus pattern (140 bp):
ATTTTATGACTAGTAGTTTAATCTAGCTCATTTTCATTTTCTGACTCATAGCATAATCACGATCA
TTTTCATTTTCTAACTCATGGTTTAATCATAGTCATTTTTATTTTTTGAATCGTGGTTTAATCCT
GGTTGTTTCC
Found at i:5327336 original size:141 final size:140
Alignment explanation
Indices: 5327076--5327375 Score: 297
Period size: 141 Copynumber: 2.1 Consensus size: 140
5327066 TTATTCTCAG
* ** *
5327076 TCATTTTCATTTTCTGACTTATAGTTTAATCTCGATCATTTTCATTTTCTAACCTATGGTTTAAT
1 TCATTTTCATTTTCTGACTCATAGCATAATCACGATCATTTTCATTTTCTAACCTATGGTTTAAT
* * *
5327141 CATGATCATTTTTCTTTTTTGGAATGGTGGTTTAATCCTGGTTGTTTCCATTTTTTGACT-AGTA
66 CATGATCATTTTTATTTTTTGGAATCGTGGTTTAATCCTGATTGTTTCCA-TTTTTGA-TGAGTA
5327205 GTTTAATCTGGC
129 GTTTAATCTGGC
* * * * * *
5327217 TCATTTTCATTTTTTGACTCATGGCATAATCAGGATTATTTTCATTTTTTGA-CTCATGGTTTAA
1 TCATTTTCATTTTCTGACTCATAGCATAATCACGATCATTTTCATTTTCTAACCT-ATGGTTTAA
* ** *
5327281 TCAT-AGTCATTTTTATTTTTT-GACTCGTGGTTTAATCCCT-ATCAT-TTTCTGTTTTTGATGG
65 TCATGA-TCATTTTTATTTTTTGGAATCGTGGTTTAAT-CCTGAT--TGTTTCCATTTTTGATGA
****
5327342 GTAGTTTAATCCCAA
126 GTAGTTTAATCTGGC
*
5327357 TCGTTTTCATTTTCTGACT
1 TCATTTTCATTTTCTGACT
5327376 TGTGGTTTAA
Statistics
Matches: 130, Mismatches: 23, Indels: 13
0.78 0.14 0.08
Matches are distributed among these distances:
139 1 0.01
140 52 0.40
141 76 0.58
142 1 0.01
ACGTcount: A:0.20, C:0.15, G:0.14, T:0.51
Consensus pattern (140 bp):
TCATTTTCATTTTCTGACTCATAGCATAATCACGATCATTTTCATTTTCTAACCTATGGTTTAAT
CATGATCATTTTTATTTTTTGGAATCGTGGTTTAATCCTGATTGTTTCCATTTTTGATGAGTAGT
TTAATCTGGC
Found at i:5328092 original size:141 final size:141
Alignment explanation
Indices: 5327842--5328118 Score: 313
Period size: 141 Copynumber: 2.0 Consensus size: 141
5327832 ATCCCTCGCA
* * * * *
5327842 TTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCTCACTCATAGTTTAATCTC
1 TTTTCATTTTATGACTCGTGATTTAATCTCAGTCATTTTCATTTCCTCACTCATAGCTTAATCAC
* ** ** **
5327907 GATCATTTTCATTTTCTAACCCATGGTTTAATCCTGATTGTTTTTTTTTTTTTGACTGGTGGTTT
66 GATCATTTTCATTTTCTAACCCATGGTCTAATCCTGATCCTTTTTAATTTTTTGACTCATGGTTT
5327972 AATCCTGGTTG
131 AATCCTGGTTG
* * * * *
5327983 TTTTCATTTTTTGACTTGTGATTTAATCT-GGCTCATTTTCATTTCCTGACTCATGGCTTAATCA
1 TTTTCATTTTATGACTCGTGATTTAATCTCAG-TCATTTTCATTTCCTCACTCATAGCTTAATCA
* * * * * * * *
5328047 GGATTATTTTCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACTCATGGTT
65 CGATCATTTTCATTTTCTAACCCATGGTCTAATCCTGATCCTTTTTAATTTTTTGACTCATGGTT
5328112 TAATCCT
130 TAATCCT
5328119 TATCTTTTTT
Statistics
Matches: 110, Mismatches: 25, Indels: 2
0.80 0.18 0.01
Matches are distributed among these distances:
140 1 0.01
141 109 0.99
ACGTcount: A:0.17, C:0.17, G:0.14, T:0.52
Consensus pattern (141 bp):
TTTTCATTTTATGACTCGTGATTTAATCTCAGTCATTTTCATTTCCTCACTCATAGCTTAATCAC
GATCATTTTCATTTTCTAACCCATGGTCTAATCCTGATCCTTTTTAATTTTTTGACTCATGGTTT
AATCCTGGTTG
Found at i:5328165 original size:177 final size:177
Alignment explanation
Indices: 5327928--5328246 Score: 437
Period size: 177 Copynumber: 1.8 Consensus size: 177
5327918 TTTTCTAACC
* * * *** *
5327928 CATGGTTTAATCCTGATTGTTTTTTTTTTTTTGACTGGTGGTTTAATCCTGGTTGTTTTCATTTT
1 CATGGTTTAATCCTGATTGTTTTTCTTTTTTTAACTGGTAGTTTAATCCCAATCGTTTTCATTTT
5327993 TTGACTTGTGATTTAAT-CTGGCTCATTTTCATTTCCTGACTCATGGCTTAATC-AGGATTATTT
66 TTGACTTGTGATTTAATCCTGG-TCATTTTCATTTCCTGACTCATGGCTTAATCTAGG-TTATTT
5328056 TCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACT
129 TCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACT
* * *
5328105 CATGGTTTAATCCTTATCT-TTTTTCTTTTTTTAATTGGTATTTTAATCCCAATCGTTTTCATTT
1 CATGGTTTAATCCTGAT-TGTTTTTCTTTTTTTAACTGGTAGTTTAATCCCAATCGTTTTCATTT
* * * ** * *
5328169 TTTGACTTGTGGTTTAATCCTGGTCTTTTTCATTTTCTGACTTGTGGTTTAATCTAGGTTGTTTT
65 TTTGACTTGTGATTTAATCCTGGTCATTTTCATTTCCTGACTCATGGCTTAATCTAGGTTATTTT
5328234 CATTTTTTGACTC
130 CATTTTTTGACTC
5328247 ACGGTTTAAT
Statistics
Matches: 122, Mismatches: 17, Indels: 6
0.84 0.12 0.04
Matches are distributed among these distances:
177 114 0.93
178 8 0.07
ACGTcount: A:0.16, C:0.15, G:0.15, T:0.54
Consensus pattern (177 bp):
CATGGTTTAATCCTGATTGTTTTTCTTTTTTTAACTGGTAGTTTAATCCCAATCGTTTTCATTTT
TTGACTTGTGATTTAATCCTGGTCATTTTCATTTCCTGACTCATGGCTTAATCTAGGTTATTTTC
ATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACT
Found at i:5328169 original size:71 final size:70
Alignment explanation
Indices: 5327842--5328258 Score: 184
Period size: 71 Copynumber: 5.9 Consensus size: 70
5327832 ATCCCTCGCA
* * * * * * * * *
5327842 TTTTCATTTTATGACTCGTGGTTTATTCTCAG-TCATTTTCATTTTCTCACTCATAGTTTAAT-C
1 TTTTCATTTTCTGAATTGTAGTTTAATC-CAGATCGTTTTCATTTTTTGACTCATGGTTTAATCC
*
5327905 TCGATCA
65 T-GATCT
*** * * * ** **
5327912 TTTTCATTTTCT-AACCCATGGTTTAATCCTGATTGTTTTTTTTTTTTTGACTGGTGGTTTAATC
1 TTTTCATTTTCTGAA-TTGTAGTTTAATCCAGATCG-TTTTCATTTTTTGACTCATGGTTTAATC
*
5327976 CTGGT-T
64 CTGATCT
* * ** * * ** *
5327982 GTTTTCATTTTTTGACTTGT-GATTTAATCTGGCTCATTTTCATTTCCTGACTCATGGCTTAATC
1 -TTTTCATTTTCTGAATTGTAG-TTTAATCCAGATCGTTTTCATTTTTTGACTCATGGTTTAATC
**
5328046 AGGAT-T
64 CTGATCT
* * * * * ** * * *
5328052 ATTTTCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACTCATGGTTTAATC
1 -TTTTCATTTTCTGAATTGTAGTTTAATCCAGAT-CGTTTTCATTTTTTGACTCATGGTTTAATC
*
5328117 CTTATCTT
64 CTGATC-T
* * * **
5328125 TTTTC-TTTTTTTAATTGGTATTTTAATCCCA-ATCGTTTTCATTTTTTGACTTGTGGTTTAATC
1 TTTTCATTTTCTGAATT-GTAGTTTAAT-CCAGATCGTTTTCATTTTTTGACTCATGGTTTAATC
*
5328188 CTGGTCT
64 CTGATCT
* * * * * *
5328195 TTTTCATTTTCTGACTTGTGGTTTAATCTAGGTTGTTTTCATTTTTTGACTCACGGTTTAATCC
1 TTTTCATTTTCTGAATTGTAGTTTAATCCAGATCGTTTTCATTTTTTGACTCATGGTTTAATCC
5328259 CCGTCGTTTT
Statistics
Matches: 255, Mismatches: 77, Indels: 30
0.70 0.21 0.08
Matches are distributed among these distances:
69 5 0.02
70 115 0.45
71 117 0.46
72 16 0.06
73 2 0.01
ACGTcount: A:0.17, C:0.16, G:0.14, T:0.53
Consensus pattern (70 bp):
TTTTCATTTTCTGAATTGTAGTTTAATCCAGATCGTTTTCATTTTTTGACTCATGGTTTAATCCT
GATCT
Found at i:5328345 original size:177 final size:177
Alignment explanation
Indices: 5327980--5328363 Score: 420
Period size: 177 Copynumber: 2.2 Consensus size: 177
5327970 TTAATCCTGG
5327980 TTGTTTTCATTTTTTGACTTGTGATTTAATCTGGCTCATTTTCATTTCCTGACTCATGGCTTAAT
1 TTGTTTTCATTTTTTGACTTGTGATTTAATCTGGCTCATTTTCATTTCCTGACTCATGGCTTAAT
** *** * * * *
5328045 CAGGATTATTTTCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTTTTTGACTCATGG
66 CAGGATTATTTTCATTTTTTGACTCACGGTCTAATCCCCGTCCGTTTTAATCTTTTGACTCACGA
* *
5328110 TTTAATCCTTATCTTTTTTCTTTTTTTAATTGGTATTTTAATCCCAA
131 TTTAATCCTGATCTATTTTCTTTTTTTAATTGGTATTTTAATCCCAA
* * * * ** *
5328157 TCGTTTTCATTTTTTGACTTGTGGTTTAATCCTGG-TCTTTTTCATTTTCTGACTTGTGGTTTAA
1 TTGTTTTCATTTTTTGACTTGTGATTTAAT-CTGGCTCATTTTCATTTCCTGACTCATGGCTTAA
* * *
5328221 TCTAGG-TTGTTTTCATTTTTTGACTCACGGTTTAATCCCCGT-CGTTTTCATCTTTTGACTCAC
65 TC-AGGATTATTTTCATTTTTTGACTCACGGTCTAATCCCCGTCCGTTTTAATCTTTTGACTCAC
* * ** *
5328284 GATTTAATCGTGATC-ATTTTCATTTTTTTGACTTGCG-A-TTTAATGTCGA
129 GATTTAATCCTGATCTATTTTC-TTTTTTT-AATTG-GTATTTTAATCCCAA
* *
5328333 TTGTTCTTCATTTTTTAACTTGTGTTTTAAT
1 TTGTT-TTCATTTTTTGACTTGTGATTTAAT
5328364 GACGATCGTT
Statistics
Matches: 172, Mismatches: 29, Indels: 12
0.81 0.14 0.06
Matches are distributed among these distances:
175 5 0.03
176 48 0.28
177 111 0.65
178 8 0.05
ACGTcount: A:0.17, C:0.16, G:0.14, T:0.53
Consensus pattern (177 bp):
TTGTTTTCATTTTTTGACTTGTGATTTAATCTGGCTCATTTTCATTTCCTGACTCATGGCTTAAT
CAGGATTATTTTCATTTTTTGACTCACGGTCTAATCCCCGTCCGTTTTAATCTTTTGACTCACGA
TTTAATCCTGATCTATTTTCTTTTTTTAATTGGTATTTTAATCCCAA
Found at i:5328349 original size:212 final size:211
Alignment explanation
Indices: 5327954--5328397 Score: 461
Period size: 212 Copynumber: 2.1 Consensus size: 211
5327944 TTGTTTTTTT
* *
5327954 TTTTTTGACTGGTGGTTTAATCCTGGTTGTTTTCATTTTTTGACTTGTGATTTAATCTGGCTCAT
1 TTTTTTGACTCGTGGTTTAATCCTGGTTGTTTTCATTTTCTGACTTGTGATTTAATCTGGCTCAT
* * * * ** *
5328019 TTTCATTTCCTGACTCATGGCTTAATCAGGATTATTTTCATTTTTTGACTCGTGGTCTAATCGTG
66 TTTCATTTCCTGACTCACGGCTTAATCACGATCATTTTCATCTTTTGACTCACGATCTAATCGTG
* * * * * *
5328084 GTCCTTTTTAATTTTTTGACTCATGGTTTAATCCTTATCTTTTTTCTTTTTTTAA-TTGGTATTT
131 ATCATTTTCAATTTTTTGACT-ATGGTTTAATCCTGATCTTTCTTCATTTTTTAACTT-GTATTT
*
5328148 TAATCCCAATCGTTTTCA
194 TAATCACAATCGTTTTCA
* * *
5328166 TTTTTTGACTTGTGGTTTAATCCTGGTCT-TTTTCATTTTCTGACTTGTGGTTTAATCTAGG-TT
1 TTTTTTGACTCGTGGTTTAATCCTGGT-TGTTTTCATTTTCTGACTTGTGATTTAATCT-GGCTC
* ** * * * *
5328229 GTTTTCATTTTTTGACTCACGGTTTAATCCCCG-TCGTTTTCATCTTTTGACTCACGATTTAATC
64 ATTTTCATTTCCTGACTCACGGCTTAAT-CACGATCATTTTCATCTTTTGACTCACGATCTAATC
* *
5328293 GTGATCATTTTCATTTTTTTGACT-TGCGATTTAAT-GTCGAT-TGTTCTTCATTTTTTAACTTG
128 GTGATCATTTTCAATTTTTTGACTATG-G-TTTAATCCT-GATCT-TTCTTCATTTTTTAACTTG
* * *
5328355 TGTTTTAATGACGATCGTTTTCA
189 TATTTTAATCACAATCGTTTTCA
* *
5328378 TTTCTTGACTCGTGATTTAA
1 TTTTTTGACTCGTGGTTTAA
5328398 ACCCGATCGC
Statistics
Matches: 191, Mismatches: 33, Indels: 16
0.80 0.14 0.07
Matches are distributed among these distances:
210 2 0.01
211 3 0.02
212 179 0.94
213 7 0.04
ACGTcount: A:0.17, C:0.16, G:0.15, T:0.52
Consensus pattern (211 bp):
TTTTTTGACTCGTGGTTTAATCCTGGTTGTTTTCATTTTCTGACTTGTGATTTAATCTGGCTCAT
TTTCATTTCCTGACTCACGGCTTAATCACGATCATTTTCATCTTTTGACTCACGATCTAATCGTG
ATCATTTTCAATTTTTTGACTATGGTTTAATCCTGATCTTTCTTCATTTTTTAACTTGTATTTTA
ATCACAATCGTTTTCA
Found at i:5328459 original size:800 final size:797
Alignment explanation
Indices: 5326912--5328614 Score: 2593
Period size: 800 Copynumber: 2.1 Consensus size: 797
5326902 GCTTTTGTTC
* * * * * *
5326912 CCTGACTCATGATTTAATCCTGGTCATTTTTATTTTTTTGATTCGTGATTTAATCCTTGTTGTTT
1 CCTGACTCATGGTTTAATCCTGTTCATTTTTCTTTTTTTGACTCGTGGTTTAAT-CTTGTCGTTT
* * * * * * *
5326977 TCATTTTTTGACTCATGATTTAATTTTGGTTGTTTTCATTATCTAAGACGCGGTCTAATCGCTCG
65 CCATTTTCTGACTCATGATTTAATCTTAGTTGTTTTCATTATCTAAGACACGATCTAATCCCTCG
* * * * *
5327042 TATTTTGATTTTATGAGTCGTGGTTTATTCTCAGTCATTTTCATTTTCTGACTTATAGTTTAATC
130 CATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCTCACTCATAGTTTAATC
*
5327107 TCGATCATTTTCATTTTCTAACCTATGGTTTAATCATGATCATTTTTCTTTTTTGGAATGGTGGT
195 TCGATCATTTTCATTTTCTAACCCATGGTTTAATCATGATCATTTTTCTTTTTTGGAATGGTGGT
**
5327172 TTAATCCTGGTTGTTTCCATTTTTTGACTAGTAGTTTAATCTGGCTCATTTTCATTTTTTGACTC
260 TTAATCCTGGTTGTTTCCATTTTTTGACTAGTAGTTTAATCTGGCTCATTTTCATTTCCTGACTC
*
5327237 ATGGCATAATCAGGATTATTTTCATTTTTTGACTCATGGTTTAATCATAGTCATTTTTATTTTTT
325 ATGGCATAATCAGGATTATTTTCATTTTTTGACTCATGGTCTAATCATAGTCATTTTTATTTTTT
* *
5327302 GACTCGTGGTTTAATCCCTATCATTTTCTGTTTTTGATGGGTAGTTTAATCCCAATCGTTTTCAT
390 GACTCATGGTTTAATCCCTATCATTTTCTGTTTTTAATGGGTAGTTTAATCCCAATCGTTTTCAT
5327367 TTTCTGACTTGTGGTTTAATCCTAGTCGTTTTCATTTTCTGACTTGTGGTTTAATCTAGGTTGTT
455 TTTCTGACTTGTGGTTTAATCCTAGTCGTTTTCATTTTCTGACTTGTGGTTTAATCTAGGTTGTT
* * * *
5327432 TTTATTTTTTCACTCATGGTTTAATCACCGTCGTTTTCATCTTCTGACTCACGGTTTAATCGCGG
520 TTCATTTTTTCACTCACGGTTTAATCACCGTCGTTTTCATCTTCTGACTCACGATTTAATCGCGA
*
5327497 TCATTTTCATTTTTTTGACTTGCAGTTTAATCTCGATCGTTCTTCATTTTTTGACTCGTGTTTAA
585 TCATTTTCATTTTTTTGACTTGCAGTTTAATCTCGATCGTTCTTCATTTTTTAACTCGTGTTTAA
*
5327562 ATCACGATCATTTTCATTTCTTGACTCGTGATTTAAACCCGATCGCATTCATTTTTTGACTCATG
650 ATCACGATCATTTTCATTTCTTGACTCGTGATTTAAACCCGATCGCATTCATTTTCTGACTCATG
*
5327627 GTTTAATCTCAATCATTTTTCTTTTTCATTTTTTTATCATTCTCATTTTCTAACTCGTAGCTTAA
715 GTTTAATCCCAATCATTTTTCTTTTTCATTTTTTTATCATTCTCATTTTCTAACTCGTAGCTTAA
5327692 TTCCAATCATTTTCATTT
780 TTCCAATCATTTTCATTT
* * *
5327710 CCTGATTCATGGTTTAATCCTGTTTATTTTTCTTTTTTTGACTCATGGTTTAATCTTAGTCGTTT
1 CCTGACTCATGGTTTAATCCTGTTCATTTTTCTTTTTTTGACTCGTGGTTTAATCTT-GTCGTTT
* *
5327775 CCATTTTCTG-GTGCATGCTTTAATCTTAGTTGTTTTCATTATCTAAGACACGATCTAATCCCTC
65 CCATTTTCTGACT-CATGATTTAATCTTAGTTGTTTTCATTATCTAAGACACGATCTAATCCCTC
5327839 GCATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCTCACTCATAGTTTAAT
129 GCATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCTCACTCATAGTTTAAT
* ** * * *
5327904 CTCGATCATTTTCATTTTCTAACCCATGGTTTAATCCTGATTGTTTTTTTTTTTTTGACTGGTGG
194 CTCGATCATTTTCATTTTCTAACCCATGGTTTAATCATGATCATTTTTCTTTTTTGGAATGGTGG
* *
5327969 TTTAATCCTGGTTGTTTTCATTTTTTGACTTGT-GATTTAATCTGGCTCATTTTCATTTCCTGAC
259 TTTAATCCTGGTTGTTTCCATTTTTTGACTAGTAG-TTTAATCTGGCTCATTTTCATTTCCTGAC
* * * * *
5328033 TCATGGCTTAATCAGGATTATTTTCATTTTTTGACTCGTGGTCTAATCGTGGTCCTTTTTAATTT
323 TCATGGCATAATCAGGATTATTTTCATTTTTTGACTCATGGTCTAATCATAGTCATTTTT-ATTT
* * * * *
5328098 TTTGACTCATGGTTTAATCCTTATCTTTTTTCTTTTTTTAATTGGTATTTTAATCCCAATCGTTT
387 TTTGACTCATGGTTTAATCCCTATC-ATTTTCTGTTTTTAATGGGTAGTTTAATCCCAATCGTTT
* * *
5328163 TCATTTTTTGACTTGTGGTTTAATCCTGGTCTTTTTCATTTTCTGACTTGTGGTTTAATCTAGGT
451 TCATTTTCTGACTTGTGGTTTAATCCTAGTCGTTTTCATTTTCTGACTTGTGGTTTAATCTAGGT
* * *
5328228 TGTTTTCATTTTTTGACTCACGGTTTAATCCCCGTCGTTTTCATCTTTTGACTCACGATTTAATC
516 TGTTTTCATTTTTTCACTCACGGTTTAATCACCGTCGTTTTCATCTTCTGACTCACGATTTAATC
* * * *
5328293 GTGATCATTTTCATTTTTTTGACTTGC-GATTTAATGTCGATTGTTCTTCATTTTTTAACTTGTG
581 GCGATCATTTTCATTTTTTTGACTTGCAG-TTTAATCTCGATCGTTCTTCATTTTTTAACTCGTG
* * *
5328357 TTTTAATGACGATCGTTTTCATTTCTTGACTCGTGATTTAAACCCGATCGCATTCATTTTCTGAC
645 TTTAAATCACGATCATTTTCATTTCTTGACTCGTGATTTAAACCCGATCGCATTCATTTTCTGAC
* *
5328422 TCATTGTTTAATCCCAATCATTTTTCTTTTTCATTTTTTTATCGTTCTCATTTTCTAACTCGTAG
710 TCATGGTTTAATCCCAATCATTTTTCTTTTTCATTTTTTTATCATTCTCATTTTCTAACTCGTAG
5328487 CTTAATTCCAATCATTTTCATTT
775 CTTAATTCCAATCATTTTCATTT
* * * * ** *
5328510 CCTGACTCACGGTTTAATCTTGTTCATTTTTCTTTTTCTGACTGGTGGTTTAATCCCGATCATTT
1 CCTGACTCATGGTTTAATCCTGTTCATTTTTCTTTTTTTGACTCGTGGTTTAATCTTG-TCGTTT
* * * *
5328575 TCATTTTTTGACTCATGGTTTAATCTTAGTCGTTTTCATT
65 CCATTTTCTGACTCATGATTTAATCTTAGTTGTTTTCATT
5328615 TTCTGGCTCG
Statistics
Matches: 813, Mismatches: 84, Indels: 14
0.89 0.09 0.02
Matches are distributed among these distances:
797 5 0.01
798 335 0.41
799 29 0.04
800 443 0.54
801 1 0.00
ACGTcount: A:0.18, C:0.17, G:0.13, T:0.51
Consensus pattern (797 bp):
CCTGACTCATGGTTTAATCCTGTTCATTTTTCTTTTTTTGACTCGTGGTTTAATCTTGTCGTTTC
CATTTTCTGACTCATGATTTAATCTTAGTTGTTTTCATTATCTAAGACACGATCTAATCCCTCGC
ATTTTCATTTTATGACTCGTGGTTTATTCTCAGTCATTTTCATTTTCTCACTCATAGTTTAATCT
CGATCATTTTCATTTTCTAACCCATGGTTTAATCATGATCATTTTTCTTTTTTGGAATGGTGGTT
TAATCCTGGTTGTTTCCATTTTTTGACTAGTAGTTTAATCTGGCTCATTTTCATTTCCTGACTCA
TGGCATAATCAGGATTATTTTCATTTTTTGACTCATGGTCTAATCATAGTCATTTTTATTTTTTG
ACTCATGGTTTAATCCCTATCATTTTCTGTTTTTAATGGGTAGTTTAATCCCAATCGTTTTCATT
TTCTGACTTGTGGTTTAATCCTAGTCGTTTTCATTTTCTGACTTGTGGTTTAATCTAGGTTGTTT
TCATTTTTTCACTCACGGTTTAATCACCGTCGTTTTCATCTTCTGACTCACGATTTAATCGCGAT
CATTTTCATTTTTTTGACTTGCAGTTTAATCTCGATCGTTCTTCATTTTTTAACTCGTGTTTAAA
TCACGATCATTTTCATTTCTTGACTCGTGATTTAAACCCGATCGCATTCATTTTCTGACTCATGG
TTTAATCCCAATCATTTTTCTTTTTCATTTTTTTATCATTCTCATTTTCTAACTCGTAGCTTAAT
TCCAATCATTTTCATTT
Found at i:5330354 original size:142 final size:141
Alignment explanation
Indices: 5330053--5330361 Score: 336
Period size: 142 Copynumber: 2.2 Consensus size: 141
5330043 TTGATGGGTA
** * *
5330053 GTTTAATCCCAATCGTTTTCATTTT-CTGACTTGTGGTTTAATCCTGGTCCTTTTTATTTTCTGA
1 GTTTAATCCCAATCGTTTTTTTTTTCCTGACTTGTGGTTTAATCCTGGTCATTTTCATTTTCTGA
** * ** * * * * **
5330117 CTTTTGGTTTAATCTGGGTTGTTTTCATTTTTTGACTCACGATTTAATCCCCGTCGTTTTCATCT
66 CTCGTGCTTTAATCACGATCGTTTTCATTTCTTGACTCACGATTTAATACCCGTCGCATTCATCT
5330182 TCCGACTCAAG
131 TCCGACTCAAG
* ** *
5330193 GTTTAATCGCGGTCGTTTTTTTTTTCCTGACTTGTGGTTTAAT-CTCGGTCATTCTTCATTTTTT
1 GTTTAATCCCAATCGTTTTTTTTTTCCTGACTTGTGGTTTAATCCT-GGTCATT-TTCATTTTCT
**
5330257 GACTCGTGCTTTAATCACGATCGTTTTCATTTCTTGACTCGTGATTTAA-ACCCGATCGCATTCA
64 GACTCGTGCTTTAATCACGATCGTTTTCATTTCTTGACTCACGATTTAATACCCG-TCGCATTCA
* * *
5330321 TTTTCTGACTCATG
128 TCTTCCGACTCAAG
*
5330335 GTTTAATCCCAATCATTTTTCTTTTTC
1 GTTTAATCCCAATCGTTTTT-TTTTTC
5330362 ATTTTTTTAT
Statistics
Matches: 136, Mismatches: 28, Indels: 7
0.80 0.16 0.04
Matches are distributed among these distances:
140 22 0.16
141 27 0.20
142 81 0.60
143 6 0.04
ACGTcount: A:0.16, C:0.21, G:0.15, T:0.48
Consensus pattern (141 bp):
GTTTAATCCCAATCGTTTTTTTTTTCCTGACTTGTGGTTTAATCCTGGTCATTTTCATTTTCTGA
CTCGTGCTTTAATCACGATCGTTTTCATTTCTTGACTCACGATTTAATACCCGTCGCATTCATCT
TCCGACTCAAG
Found at i:5330460 original size:37 final size:37
Alignment explanation
Indices: 5330419--5330508 Score: 87
Period size: 37 Copynumber: 2.5 Consensus size: 37
5330409 TTTTCATTTC
* * * *
5330419 CTGACTCATGGTTTAATCCT-GTTCATTTTTCTTTTTT
1 CTGACTCATGGTTTAATCCTCGGT-AATTTCCATTTTT
***
5330456 CTGACTGGGGGTTTAAT-CTCGGTAATTTCCATTTTT
1 CTGACTCATGGTTTAATCCTCGGTAATTTCCATTTTT
5330492 -TGACTCATGGTTTAATC
1 CTGACTCATGGTTTAATC
5330509 TTAGTCGTTT
Statistics
Matches: 41, Mismatches: 10, Indels: 5
0.73 0.18 0.09
Matches are distributed among these distances:
35 13 0.32
36 12 0.29
37 16 0.39
ACGTcount: A:0.17, C:0.18, G:0.17, T:0.49
Consensus pattern (37 bp):
CTGACTCATGGTTTAATCCTCGGTAATTTCCATTTTT
Found at i:5330936 original size:106 final size:107
Alignment explanation
Indices: 5330750--5330995 Score: 232
Period size: 106 Copynumber: 2.3 Consensus size: 107
5330740 TTTAGATCGT
* * *
5330750 TTTTCATTTTTTGACTCGTGGTTTAATCCAAATCATTTTCGTTTTCATTTTCTGACTCAATTTTT
1 TTTTCA-TTTTTGACTCGTGGTTTAAT-C--AT-ATTATCATTTTCATTTTCTGACTCAATATTT
* * *
5330815 AATCTCGATCGTTTTTCTT-TTTCT-AGCTAGTGGTTTAATCTCGGTCA
61 AATCTCGATCATTTTT-TTATTTCTGA-CTAGTGATTTAATCTCAGTCA
* *
5330862 TTTTCATTTTATGACTCGTGGTTTAATC-T-TTATCATTTTCATTTTTTGACT-AGTGATTTAAT
1 TTTTCATTTT-TGACTCGTGGTTTAATCATATTATCATTTTCATTTTCTGACTCAAT-ATTTAAT
* * * *
5330924 CTTGGTCATTTTTTTATTTCTGACTCGTGATTTAATCTCAGTCG
64 CTCGATCATTTTTTTATTTCTGACTAGTGATTTAATCTCAGTCA
* * *
5330968 TTGTCATTTCTTGACTCATGATTTAATC
1 TTTTCATTT-TTGACTCGTGGTTTAATC
5330996 CCAATTGTTT
Statistics
Matches: 114, Mismatches: 15, Indels: 16
0.79 0.10 0.11
Matches are distributed among these distances:
105 4 0.04
106 80 0.70
107 2 0.02
108 1 0.01
111 5 0.04
112 22 0.19
ACGTcount: A:0.19, C:0.16, G:0.13, T:0.52
Consensus pattern (107 bp):
TTTTCATTTTTGACTCGTGGTTTAATCATATTATCATTTTCATTTTCTGACTCAATATTTAATCT
CGATCATTTTTTTATTTCTGACTAGTGATTTAATCTCAGTCA
Found at i:5330975 original size:71 final size:70
Alignment explanation
Indices: 5330841--5330995 Score: 179
Period size: 71 Copynumber: 2.2 Consensus size: 70
5330831 CTTTTTCTAG
* * * *
5330841 CTAGTGGTTTAATCTCGGTCATTTTCATTTTATGACTCGTGGTTTAATCTTTATCATTTTCATTT
1 CTAGTGATTTAATCTCGGTCATTTTCATTTTATGACTCGTGATTTAATCTTCATCATTGTCATTT
*
5330906 TTTGA
66 CTTGA
* ** * *
5330911 CTAGTGATTTAATCTTGGTCATTTTTTTATTTCTGACTCGTGATTTAATC-TCAGTCGTTGTCAT
1 CTAGTGATTTAATCTCGGTCATTTTCAT-TTTATGACTCGTGATTTAATCTTCA-TCATTGTCAT
5330975 TTCTTGA
64 TTCTTGA
5330982 CTCA-TGATTTAATC
1 CT-AGTGATTTAATC
5330996 CCAATTGTTT
Statistics
Matches: 72, Mismatches: 10, Indels: 5
0.83 0.11 0.06
Matches are distributed among these distances:
70 26 0.36
71 45 0.62
72 1 0.01
ACGTcount: A:0.19, C:0.15, G:0.14, T:0.51
Consensus pattern (70 bp):
CTAGTGATTTAATCTCGGTCATTTTCATTTTATGACTCGTGATTTAATCTTCATCATTGTCATTT
CTTGA
Found at i:5331217 original size:39 final size:40
Alignment explanation
Indices: 5331140--5331226 Score: 149
Period size: 39 Copynumber: 2.2 Consensus size: 40
5331130 TTAATATGGG
5331140 TCATTTTCATTTTTTGACTCACAGTTTAATCCCGATCATTT
1 TCATTTTCATTTTTTGACT-ACAGTTTAATCCCGATCATTT
*
5331181 TCATTTTCATTTTTTGACT-CGGTTTAATCCCGATCATTT
1 TCATTTTCATTTTTTGACTACAGTTTAATCCCGATCATTT
5331220 TCATTTT
1 TCATTTT
5331227 TTAACTCGTG
Statistics
Matches: 45, Mismatches: 1, Indels: 2
0.94 0.02 0.04
Matches are distributed among these distances:
39 26 0.58
41 19 0.42
ACGTcount: A:0.20, C:0.21, G:0.08, T:0.52
Consensus pattern (40 bp):
TCATTTTCATTTTTTGACTACAGTTTAATCCCGATCATTT
Found at i:5331446 original size:71 final size:70
Alignment explanation
Indices: 5331253--5331455 Score: 189
Period size: 71 Copynumber: 2.9 Consensus size: 70
5331243 GTTTCAATCA
* * * * * * **
5331253 TTTTTCATTCTCTGACATGTGATTTAGTTTCGGTGGTTTTGATTTTCTGACTCATGATTTATTCT
1 TTTTTCATTTTCTGACATGTGATTTAATTT-GATCGTTTTCATTTTCTGACTCATGATTTAATAA
5331318 CAGTAG
65 CAGTAG
* * * *
5331324 -TTTTCAATTTT-TGACAAGTGGTTTAATGTCGATCATTTTCATTTCTCTGACTCATGATTTAAT
1 TTTTTC-ATTTTCTGACATGTGATTTAAT-TTGATCGTTTTCATTT-TCTGACTCATGATTTAAT
* *
5331387 AACGGTTG
63 AACAGTAG
* *
5331395 TTTTTCATTTTCTGACTTGTGATTTAATCTTGATCGTTTTCATTTTTTGACTCA-G-TTTAAT
1 TTTTTCATTTTCTGACATGTGATTTAAT-TTGATCGTTTTCATTTTCTGACTCATGATTTAAT
5331456 CTTGATCATT
Statistics
Matches: 106, Mismatches: 21, Indels: 12
0.76 0.15 0.09
Matches are distributed among these distances:
69 6 0.06
70 29 0.27
71 39 0.37
72 32 0.30
ACGTcount: A:0.20, C:0.14, G:0.15, T:0.51
Consensus pattern (70 bp):
TTTTTCATTTTCTGACATGTGATTTAATTTGATCGTTTTCATTTTCTGACTCATGATTTAATAAC
AGTAG
Found at i:5331949 original size:29 final size:29
Alignment explanation
Indices: 5331886--5331951 Score: 80
Period size: 29 Copynumber: 2.3 Consensus size: 29
5331876 TTGCTCGTTT
*
5331886 TCATTTTCTGACTCATGGCTTAATCAGGA
1 TCATTTTCTGACTCATGGCTTAATCAAGA
* * *
5331915 TTATTTTTTGACTCATGGTTTAATCACAG-
1 TCATTTTCTGACTCATGGCTTAATCA-AGA
5331944 TCATTTTC
1 TCATTTTC
5331952 ATTTTTTGCC
Statistics
Matches: 30, Mismatches: 6, Indels: 2
0.79 0.16 0.05
Matches are distributed among these distances:
29 29 0.97
30 1 0.03
ACGTcount: A:0.23, C:0.18, G:0.14, T:0.45
Consensus pattern (29 bp):
TCATTTTCTGACTCATGGCTTAATCAAGA
Found at i:5332684 original size:17 final size:18
Alignment explanation
Indices: 5332662--5332695 Score: 61
Period size: 17 Copynumber: 1.9 Consensus size: 18
5332652 TCAGTTTTTG
5332662 TTCATTTTTTGA-TCGTT
1 TTCATTTTTTGACTCGTT
5332679 TTCATTTTTTGACTCGT
1 TTCATTTTTTGACTCGT
5332696 GGTTTAATCC
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
17 12 0.75
18 4 0.25
ACGTcount: A:0.12, C:0.15, G:0.12, T:0.62
Consensus pattern (18 bp):
TTCATTTTTTGACTCGTT
Found at i:5333072 original size:69 final size:70
Alignment explanation
Indices: 5332960--5333112 Score: 184
Period size: 69 Copynumber: 2.2 Consensus size: 70
5332950 CCCGATTGTA
* * * * * * **
5332960 TTCATTTTTTGACTCGTGGTTTAATCCTGGTCATTTTTATTTTTTGACTC-GTGATTTAATCTCG
1 TTCATTTTCTAACTTGTAGTTTAATACGGGTCATTTTTATTTTTTGACTCACAG-TTTAATCTCG
*
5333024 ATCTTT
65 ATCATT
*
5333030 TTTATTTTCTAACTTGTAGTTTAATACGGGTCA-TTTTATTTTTTGACTCACAGTTTAATCTCGA
1 TTCATTTTCTAACTTGTAGTTTAATACGGGTCATTTTTATTTTTTGACTCACAGTTTAATCTCGA
5333094 TCATT
66 TCATT
*
5333099 TTCATTTTTTAACT
1 TTCATTTTCTAACT
5333113 CATGATTTAA
Statistics
Matches: 70, Mismatches: 12, Indels: 3
0.82 0.14 0.04
Matches are distributed among these distances:
69 43 0.61
70 27 0.39
ACGTcount: A:0.20, C:0.15, G:0.12, T:0.54
Consensus pattern (70 bp):
TTCATTTTCTAACTTGTAGTTTAATACGGGTCATTTTTATTTTTTGACTCACAGTTTAATCTCGA
TCATT
Found at i:5333114 original size:35 final size:34
Alignment explanation
Indices: 5333014--5333114 Score: 96
Period size: 34 Copynumber: 2.9 Consensus size: 34
5333004 TGACTCGTGA
* * ***
5333014 TTTAATCTCGATCTTTTTTATTTTCTAACTTGTAG
1 TTTAATCTCGATC-ATTTTATTTTTTAACTCACAG
* * *
5333049 TTTAATAC-GGGTCATTTTATTTTTTGACTCACAG
1 TTTAAT-CTCGATCATTTTATTTTTTAACTCACAG
5333083 TTTAATCTCGATCATTTTCATTTTTTAACTCA
1 TTTAATCTCGATCATTTT-ATTTTTTAACTCA
5333115 TGATTTAATT
Statistics
Matches: 52, Mismatches: 11, Indels: 6
0.75 0.16 0.09
Matches are distributed among these distances:
33 1 0.02
34 29 0.56
35 21 0.40
36 1 0.02
ACGTcount: A:0.23, C:0.16, G:0.09, T:0.52
Consensus pattern (34 bp):
TTTAATCTCGATCATTTTATTTTTTAACTCACAG
Found at i:5333122 original size:35 final size:35
Alignment explanation
Indices: 5332672--5349502 Score: 1937
Period size: 35 Copynumber: 480.5 Consensus size: 35
5332662 TTCATTTTTT
* * * *
5332672 GATCGTTTTCATTTTTTGACTCGTGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5332707 AATCCTTTTCATTTTCTGACTCAATG-TTTAATCTC
1 GATCATTTTCATTTTTTGACTC-ATGATTTAATCTC
* * *
5332742 GGTCATTTTCCTTTTTCT-AGCT-AGTGGTTTAATCTC
1 GATCATTTTCATTTTT-TGA-CTCA-TGATTTAATCTC
** * * *
5332778 GGCCATTTTCATTTTCTGACTCGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5332812 TTATCGTTTTCATTTTTTGACT-AGTGATTTAATC-C
1 -GATCATTTTCATTTTTTGACTCA-TGATTTAATCTC
* *
5332847 TGGTCATTTT--TTATTTCTGACTCGTGATTTAATCTC
1 -GATCATTTTCATT-TTT-TGACTCATGATTTAATCTC
* * ** * *
5332883 -AGTCGTTGTCATTTCCTAACTCATGATTTAATCCC
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * ** * *
5332918 GATTGTTTTCATTTCTTAACTCGCGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * *
5332953 GATTGTATTCATTTTTTGACTCGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5332987 TGGTCATTTTTATTTTTTGACTCGTGATTTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5333023 GATCTTTTTTATTTTCTAACT--TGTAGTTTAATAC-G
1 GATCATTTTCATTTTTTGACTCATG-A-TTTAAT-CTC
* *
5333058 GGTCATTTT-ATTTTTTGACTCA-CAGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* *
5333092 GATCATTTTCATTTTTTAACTCATGATTTAATTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5333127 GGTGC-TTTAATCCTGGTTGTTT--C-CAAT-TTTTGA-CTTGC
1 GAT-CATTT--TCAT--TT-TTTGACTC-ATGATTTAATC-T-C
* * * * * *
5333165 GGTTTAATCTGGCTCGTTTTCATT--TTC-TGA-CTAATGGCT-
1 -G-ATCAT-T--TTCATTTT--TTGACTCATGATTTAAT--CTC
* * * *
5333204 TATCAGGATTATTTTCATTTTTTGACTCATGGTTTAATCAC
1 GATC---ATT-TTC--ATTTTTTGACTCATGATTTAATCTC
* *
5333245 -AGTCATTTTCATTTTTTGACTCGTGGTTTAATCGT-
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * * *
5333280 GGTCCTTTTTCATTTTTTTACTCGTGGTTTAATCCC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5333316 TATCATTTTTCTTTTTTTGA-T-GGGTAGTTTAATCCC
1 GATCA-TTTTCATTTTTTGACTCATG-A-TTTAATCTC
* * * * *
5333352 AATCATTTTCATTTTCTGACTTATGGTTTAATCTG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * *
5333387 GGTTGTTTTCATTTTCTGACTCACGGTTTAATCCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * * * *
5333423 G-TCGTTTTCATCTTCTGACTCACGATTTAATCGC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * **
5333457 GGTCATTTTCATTTTTTTGACTTACAATTTAATCTC
1 GATCATTTTCA-TTTTTTGACTCATGATTTAATCTC
* * * * * *
5333493 GGTCGTTCTTCATTTTTTGACTCGTGTTTTTATCAC
1 GATCATT-TTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5333529 GATCGTTTTCATTTCTTGAGTCGTAATTTAAAC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*** * * *
5333563 TGATCGCATTCATTTTCTGACTCATGGTTTAATCCC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5333599 AATCATTTT--TCTTTT---TCAT-ATTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5333624 -ATCGTTCTCATTTTCTAACTCGT-AGCTTAATTTC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
** * *
5333658 -AGTCATTTTCATTTCCTGACTCACGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5333692 TGTTCATTTTTC-TTTTTCTGACTGGTGGTTTAATCCC
1 -GATCA-TTTTCATTTTT-TGACTCATGATTTAATCTC
* *
5333729 GGTCA-TTTCTATTTTTTGACTCATGGTTTAATCT-
1 GATCATTTTC-ATTTTTTGACTCATGATTTAATCTC
* * * * * *
5333763 TAGTCATTTCCATTTTTTTACTCGTGCTTTAATCTA
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
*
5333799 GGTCATTTT--TTTTTCTGACTCAATG-TTTAATC-C
1 GATCATTTTCATTTTT-TGACTC-ATGATTTAATCTC
* ** * * * * **
5333832 CATTTGTTTTCGTTTTTTGATTCGTGGTTTAATCGAA
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATC-TC
* ** * *
5333869 GTTGTTTTTCATTTTTTAACTCGT-ACTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5333903 CAGTCATTTTCATTTCTTGACTCATGATTCAAACT-
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * *
5333938 GGTC-GCTTCATTTTCTAACTCGTGGTTTAGTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
5333972 GATCA-TTT--TTTTTT---T-A--ATTT--T-TC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5333995 AATCATTTTCATTTTTTGACTCGTGGTGTAATCAC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5334030 AATCGTTTTCGTTTTCTGACTCAATG-TTTAATCTC
1 GATCATTTTCATTTTTTGACTC-ATGATTTAATCTC
* * * * * *
5334065 GGTCGTTTTCCTTTTTCT-AGCTAATGGTTTAATCAC
1 GATCATTTTCATTTTT-TGA-CTCATGATTTAATCTC
* * * * *
5334101 GGTCATTTTCATTTTCTGACTCGTGGTTTAA-CCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * *
5334135 TTATTGTTTTAATTTTTTCACT-AGTAATTTAATCCC
1 -GATCATTTTCATTTTTTGACTCA-TGATTTAATCTC
*
5334171 GATCATTTT--TTATTTCTGACTCGTGATTTAATCT-
1 GATCATTTTCATT-TTT-TGACTCATGATTTAATCTC
* * ** *
5334205 TAGTCATTGTCATTTCCTGACTCATGATTTAATCCC
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * ** * *
5334241 GATTGTTTTCATTTCTTAACTCGCGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * *
5334276 GATTGTATTCATTTTTTGACTCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5334310 TGATCGTTTTCATTTTTTTCACTCATGGTTTAATCTC
1 -GATCATTTTCA-TTTTTTGACTCATGATTTAATCTC
* * ** *
5334347 GATCGTTTTCATTTTCTGACTCGCGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5334382 GATCTTTTTCATTTTCTGACTCGCGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5334417 GATCTTTTTTATTTTCTAACT--TGTAGTTTAATAC-G
1 GATCATTTTCATTTTTTGACTCATG-A-TTTAAT-CTC
*
5334452 GGTCATTTTCATTTTTTGACTCA-G-TTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5334485 GATCATTTTCATTTTTTAACTCGTGATTTAATTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * * * *
5334520 GTTGATTTTTCGTTCTCTAACAT-GTGATTTAGTTTC
1 GATCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
* ** * * *
5334556 GGTGGTTTTGAGTTTTTGACTCATGATTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5334591 -AGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATC
1 GA-TCA-TTTTC-ATTTTTTGAC-TCATGATTTAATCTC
* * * *
5334626 GATCATTTTCATTTCTCTGACTCATGATTTAGTGATG
1 GATCATTTTCATTT-TTTGACTCATGATTTAAT-CTC
* ** **
5334663 GTTGTTTTTCATTTTTTGACTTGTGATTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * *
5334698 AATTGTTTTCATTTTTTTACTCACGGTTTAATCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5334733 GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** ** * *
5334768 GGTTGTTTTTGTTTTTTGACTCATGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5334803 GGTCATTTTCATTTTTTGACTTACGATTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* * * ***
5334838 CATCGCTTTT-GTTCCCT-AGCTCATGATTTAATC-C
1 GATC-ATTTTCATTTTTTGA-CTCATGATTTAATCTC
* * *
5334872 TGGTCATTTTCATTTTTCTGATTCATGATTTAATCCTT
1 -GATCATTTTCATTTTT-TGACTCATGATTTAAT-CTC
** * ** * *
5334910 G-TTGTTTTCATTTTCTGACTTGTGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** ** * *
5334944 GGTTGTTTTCATTATCTAAGACGC--GGTTTAATCCCTC
1 GATCATTTTCATT-T-TTTGACTCATGATTTAAT--CTC
* * * *
5334981 G--CATTTTCATTTTATGACTCGTGGTTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
5335014 AGTCATTTTCATTTTCATTTTTTGACTCAT-AGTTTAATCTC
1 -G--A---TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * *
5335055 GATCATTTTCAATTTTTGACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5335089 TGATCGTTTT--TTTTTT-ACTGGTGGTTTAATCCTG
1 -GATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * * * * *
5335123 GCTGC--TTCCATTTTTTGACTTACGGTTTAATCTG
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
* ** **
5335157 GCTCATTTTCATTTTTTGACTCATGGCTTAATCAG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5335192 GATTATTTTGATTTTTTGACTCATGGTTTAATCATA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5335228 G-TTATTTTCATTTTCTT-ACTCGTGGTCTAATCGT-
1 GATCATTTTCATTTT-TTGACTCATGATTTAATC-TC
* * *
5335262 GATCTTTTTTCATTTTTTTGACTCGTGGTTTAATC-C
1 GATC-ATTTTCA-TTTTTTGACTCATGATTTAATCTC
* * ** *
5335298 TTATCATTTTTCTTTTTTTGA-T-GGGTAGTTTAATCCC
1 -GATCA-TTTTCATTTTTTGACTCATG-A-TTTAATCTC
* ** * ** *
5335335 AATTGTTTTCATTTTCTGACTGGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5335369 TGGTCGTTTTCATTTTTTGACTTATGGTTTAATCTA
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5335405 GGTTGTTTTCATTTTTTGATTCACGATTTAATCCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * * * * *
5335441 G-TCCTTTTCATCTTTCGACTCACGGTTTAATCGC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5335475 GATAATTTT--TGTTTTTGACTTACGATTTAATCTT
1 GATCATTTTCAT-TTTTTGACTCATGATTTAATCTC
* * * *
5335509 GATCGTTCTTCATTTTTTGACTCGTGTTTTAATCAC
1 GATCATT-TTCATTTTTTGACTCATGATTTAATCTC
* * * *
5335545 GATCGTTTTCATTTCTTGACTCATGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*** * * *
5335580 GATCGCATTCATTTTCTGACTCATGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*
5335615 AATCATTTTC--TTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * *
5335639 TATTGTTCTCATTTTCTAACTCGT-AGCTTAAT-TC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5335673 CAGTCATTTTCATTTTCTGACTCACGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5335708 TGTTCATTTTTC-TTTTTCTGACTGGTGGTTTAATCGC
1 -GATCA-TTTTCATTTTT-TGACTCATGATTTAATCTC
*
5335745 -AGTCA-TTTCTATTTTTTGACTCATGGTTTAATCT-
1 GA-TCATTTTC-ATTTTTTGACTCATGATTTAATCTC
* * * * * * * *
5335779 TAGTCGTTTCCATTTTCTGGCTCATGCTTTAATGTA
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5335815 GGTCATTTT-TTTTTTCTGACTCAATG-TTTAATC-C
1 GATCATTTTCATTTTT-TGACTC-ATGATTTAATCTC
* ** * * *
5335849 CACTTGTTTTCGTTTTCTGACTCATGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5335884 AGGTTGTTTTTCATTTTTTAACTCGT-ACTTTAATC-C
1 --GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * * * *
5335920 CAGTCATTTTCATTTCTTGACTCATTATTCAAACTG
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** * ** *
5335956 GTTGCA--TTCATTTTCTAACTTGTGGTTTGGTCCC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
*
5335990 GATCA-TTT--TTTTTT---TC---ATTT--T-TG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5336013 GATCGTTTTCATTTTCTGACTCGTGGTTTAATATC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5336048 TATCATTTTCGTTTTCTGACTTAATG-TTTAATCTC
1 GATCATTTTCATTTTTTGAC-TCATGATTTAATCTC
* * * * *
5336083 GGTCGTTTTCCTTTTTCT-AGCT-AGTGGTTTAATCTA
1 GATCATTTTCATTTTT-TGA-CTCA-TGATTTAATCTC
* * *
5336119 GGTCATTTTCATTTTTTGACTCGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5336153 TTATCGTTTTCATTTTTTGACT-AGTTATTTAATCCC
1 -GATCATTTTCATTTTTTGACTCA-TGATTTAATCTC
* *
5336189 GATCATTTT--TTATTTCTAACTCATGATTTAACCTC
1 GATCATTTTCATT-TTT-TGACTCATGATTTAATCTC
* * * *
5336224 -AGTCGTTGTCATTTCTTGACTCATGATTTAATCCC
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * * *
5336259 GATTGTTTTCATTTCTTAACTCACGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * *
5336294 GATTGTATTCATTTTTTGACTCGTGGTTTAATCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5336329 GGTCGTTTTCATTTTCTGACTCACGATTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5336364 GATCTTTTTTATTTTCTAACTCAT-AGTTTAATAC-G
1 GATCATTTTCATTTTTTGACTCATGA-TTTAAT-CTC
* *
5336399 GGTCATTTTCATTTTTTGACTCA-G-TTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** *
5336432 GATCATTTTCATTTTTTAACTTGTGATTTAATTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5336467 AGA-CATTTTTCGTTCTCTGACAT-GTGATTTAGTTTC
1 -GATCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
* ** * *
5336503 GGT-GGTTTCGATTTTCTGACTCATGATTTATTCTC
1 GATCATTTTC-ATTTTTTGACTCATGATTTAATCTC
* ** * *
5336538 -AGT-AGTTTT--TTATTTTTACATTTTGATTTAATATT
1 GA-TCA-TTTTCATT-TTTTGAC-TCATGATTTAATCTC
* **
5336573 GATCATTTTCATTTCTCTGACTCATGATTTAATGAC
1 GATCATTTTCATTT-TTTGACTCATGATTTAATCTC
* ** * **
5336609 AGTTGTTTTTCATTTTCTGACTTGTGATTTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5336645 GATCGTTTTCATTTGTTGCCTCACGGTTTAATCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5336680 GATCATTTTCTTTTTTTGACTCATGGTTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** ** * *
5336715 GGTTGTTTTTGTTTTTTGACTCACGATTTAATTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5336750 GGTCATTTTCATTTTTTGACTTACGGTTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* * * *** *
5336785 CATCGCTTTT-GTTCCATGACTCATGATTTAATCTT
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** *
5336820 GGTCATTTTCATTTTTTTAATTTGTGATTTAATCCTT
1 GATCATTTTCA-TTTTTTGACTCATGATTTAAT-CTC
** * * *
5336857 G-TTGTTTTTATTTTTTGACT-AGTGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCA-TGATTTAATCTC
* ** ** * *
5336891 GGTTGTTTTCATTATCTAAGA-TGC--GGTCTAATCCCTC
1 GATCATTTTCATT-T-TTTGACT-CATGATTTAAT--CTC
* * * *
5336928 G--CATTTTCATTTTATGACTCGTGGTTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*
5336961 -AGTCATTTTCAGTTTTTGACTCAT-AGTTTAATCTC
1 GA-TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5336996 GATCATTTTCATTTTCTGACCCGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** *
5337030 TGATCGTTTTTCTTTTTTTGATTGGTGCTTTAATC-C
1 -GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * * *
5337066 TGGTTGTTTCCATTTCTTGACTTACGGTTTAATCTG
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** **
5337102 GCTCATTTTCATTTTCTGACTCACGGCTTAATCAG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5337137 GATTATTTTCATTTTTTGACTCATGGTTTAATCATA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5337173 G-CCATTTTCATTTTTTGACTCGTGGTCTAATCAT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5337207 GGTCTTTTTTCATTTTTTGACTCGTGGTTTAATCCC
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ***
5337243 TATCATTTTTCTTTTTTTCA-TGGGGAGTTTAATC-C
1 GATCA-TTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * * ** * *
5337278 TAATGGTTTTCATTTTCTAACTTGTGGTTTAATCTA
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5337314 GGTTGTTTTCATTTTTTGACTCACGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5337349 CATCATTTTCATCTTTCGACTCACGGTTTAATCGC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
**
5337384 GATCATTTTCATTTTTTCGACTTGTGATTTAATCTC
1 GATCATTTTCATTTTTT-GACTCATGATTTAATCTC
* * * *
5337420 GGTCGTTCTTCAATTTTTGACTGACTTGCGATTTAATCTC
1 GATCATT-TTCATTTTTTGACT--CAT--GATTTAATCTC
* * * *
5337460 GGTCGTTCTTCATTTTTTGACTCATGTTTTAATCAC
1 GATCATT-TTCATTTTTTGACTCATGATTTAATCTC
* * * *
5337496 GATCGTTTTCATTTCTTGACTCGTGATTTAAACTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*** * * *
5337531 GATCGCATTCATTTTCTGACTCATGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5337566 AATCATTTTC--CTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5337590 TATCGTTCTCATTTTCTAACTCGT-AGCTTAAT-TC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * *
5337624 CAGTCATTTTCATTTCCTGACTCATGGTTTAATCTT
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** * *
5337660 GTTCATTTTTC-TTTTTCTGATTGGTGGTTTAATCCC
1 GATCA-TTTTCATTTTT-TGACTCATGATTTAATCTC
* * * *
5337696 GGTCA-TTTCTATTTTCTAACTCATGGTTTAATCT-
1 GATCATTTTC-ATTTTTTGACTCATGATTTAATCTC
* * * * * * * *
5337730 TAGTCGTTTCCATTTCTAG-CTCGTGCTTTAATCTA
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
*
5337765 GGTCATTTTC-TTTTTCTGACTCAATG-TTTAATC-C
1 GATCATTTTCATTTTT-TGACTC-ATGATTTAATCTC
* ** * ** * *
5337799 CACTTGTTTTCGTTTCCTGACTCATGGTTTATTCTC
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5337835 -AGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATC
1 GA-TCA-TTTTC-ATTTTTTGAC-TCATGATTTAATCTC
** **
5337870 GATCATTTTCATTTCTCCGACTCATGATTTAATAAC
1 GATCATTTTCATTT-TTTGACTCATGATTTAATCTC
* ** * **
5337906 GGTTGTTTTTTATTTTTCTGACTTGTGATTTAATCTC
1 -GATCATTTTCATTTTT-TGACTCATGATTTAATCTC
* * *
5337943 GATCGTTTTCTTTTTTTGA-ACACTG-TTTAA--TC
1 GATCATTTTCATTTTTTGACTCA-TGATTTAATCTC
* * * *
5337975 -AT--TTTTTA-TTTATGACTCGTGATTTAACCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5338006 AATCGTTGTCATTTTTTCACTTATGATTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * * *
5338041 GATTGTTTTCATTTCTTAACTCACGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * *
5338076 GATTGTATTCATTTTTTGACTCGTGGTTTAATCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** *
5338111 GGTCATTTTCATTTACTAACTCATGATTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5338146 GGTCTTTTTTATTTTCTAACTCGT-AGTTTAATAC-G
1 GATCATTTTCATTTTTTGACTCATGA-TTTAAT-CTC
* * * *
5338181 GGTCATTTTCATTTTTTGACCCA-CAGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * *
5338216 GATCATTTTCATTTTTTAACTTGTGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * * *
5338251 GGTCATTTTTCGTTCTCTGACAT-GTGATTTAGTTTT
1 GATCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
**** *
5338287 G-GGGGTTTCGATTTTTTGACTCATGATTTATTCT-
1 GATCATTTTC-ATTTTTTGACTCATGATTTAATCTC
* * *
5338321 TAGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATC
1 GA-TCA-TTTTC-ATTTTTTGAC-TCATGATTTAATCTC
5338357 GATCATTTTCATTTCTTTGACTCATGATTTAA-CAAT-
1 GATCATTTTCATTT-TTTGACTCATGATTTAATC--TC
* ** * ***
5338393 GGTTGTTTTCATTTTCTGACTTGCGATTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5338428 GATCGTTTTCGTTTTTTGACTCACGGTTTAGTCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*
5338463 GATCATTTTCATTTTTTGACTCGTTG-TTTAATCTC
1 GATCATTTTCATTTTTTGACTC-ATGATTTAATCTC
* ** * * * *
5338498 GGTTGTTTTTATTTTTTGACTAATGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5338533 GGTCATTTTCATTTTTTGGCTTACGGTTT-ATTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * **
5338567 ACATCACTTTT-GTTCCTTGACTCATGATTTAATC-C
1 -GATCA-TTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5338602 TGGTCATTTTCATTTTTTTGATTCGTGATTTAATCCTT
1 -GATCATTTTCA-TTTTTTGACTCATGATTTAAT-CTC
** * * * * *
5338640 G-TTGTTTTCATTTTCTGACTCGTGATATAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** ** * * *
5338674 GGTTGTTTTCATTATCTAAGACGC--GGTCTAATCCCTC
1 GATCATTTTCATT-T-TTTGACTCATGATTTAAT--CTC
* * * * * *
5338711 G-T-ATTTTCATTTTATGACGCGTGGTTTATTCTTA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
*
5338745 GTCATTTTCATTTTCATTTTCTGACTCAT-AGTTTAATCTC
1 G--A---TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5338785 AATCATTTTCATTTTCTGACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5338819 TGATCGTTTT--TTTTTTTACTGTTGGTTTAATC-C
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * ** * *
5338852 TGGTTGTTTCCATTTTTTAACTTGTGGTTTAATCTG
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** **
5338888 GCTCGTTTTCATTTTTTGACTCATGGCTTAATCAG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5338923 GATTATTTTCCATTTTTTGACTCATGGTTTAATCATA
1 GATCATTTT-CATTTTTTGACTCATGATTTAATC-TC
* * * *
5338960 G-TCATTTTCATTTTTTGACTCGTGGTCTCATCGT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5338994 GGTCTTTTTTCATTTTTTGACTCGTGGTTTAATC-C
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5339029 TTATCATTTT--TTTTATGGGT-A-G-TTTAATCCC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * ** * *
5339060 AATTGTTTCCATTTTCTGACTGGTGGTTTAATCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** * *
5339095 GGTCGTTTTCATTTTCTGACTTGTGGTTTAATCTA
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5339130 GGTTGTTTTCATTTTTTGACTCACGGTTTAATCCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * ** * *
5339166 G-TCCTTTTCATCTTCCGACTCA-CAGTTTAATCAC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * ** **
5339200 GGTAATTTTTGTTTTTTTTGACTTGTGATTTAATCTC
1 GATCA-TTTT-CATTTTTTGACTCATGATTTAATCTC
* ** *
5339237 GATCGTTCTTCATTTTTTGACTTGTGTTTTAATCAT-
1 GATCATT-TTCATTTTTTGACTCATGATTTAATC-TC
* * *
5339273 GATCATTTTCATTTCTTGACTCATGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5339308 GATCGA-ATTCATTTTATGACTCATGGTTTAATCCC
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5339343 AATCATTTT--TCTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * *
5339367 TATTGTTCTCATTTTCTAACTCGT-AGCTTAAT-TC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5339401 CAGTCATTTTCATTTTCTGACTCACGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5339436 TATTCATTTTTC-TTTTTCTGACTGGTGGTTTAATCCC
1 GA-TCA-TTTTCATTTTT-TGACTCATGATTTAATCTC
* * *
5339473 GGTCA-TTTCTTTTTTCTGACTCATGGTTTAATCT-
1 GATCATTTTCATTTTT-TGACTCATGATTTAATCTC
* * * * * * *
5339507 TAGTCGTTTCCATTTTCT-AGCTCGTGCTTTAATCTA
1 GA-TCATTTTCATTTTTTGA-CTCATGATTTAATCTC
* *
5339543 GGTCATTTT-TTTTTTCTGACTCAATG-TTTAATC-C
1 GATCATTTTCATTTTT-TGACTC-ATGATTTAATCTC
* ** * * *
5339577 CACTTGTTTTCGTTTTCTGACTCATGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5339612 AGGTTGTTTTTCATTTTTTAACTCGT-ACTTTAATC-C
1 --GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * * * *
5339648 CAGTCATTTTTATTTCTTGACTCATGATTCAAACTG
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * ** *
5339684 GTTGCA--TTCATTTTCTAACTCGTGGTTTGGTCCC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
*
5339718 GATCA--TT--TTTTTT---TC---ATTT--T-TA
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5339740 GATCGTTTTCATTTTTTGACTCGTGGTTTAATATT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5339775 AATCATTTTCATTTTCTGACTCAATG-TTTAATCTC
1 GATCATTTTCATTTTTTGACTC-ATGATTTAATCTC
* * * * *
5339810 GGTCGTTTTCCTTTTTCTGGCT-AGTGGTTTAATCTC
1 GATCATTTTCATTTTT-TGACTCA-TGATTTAATCTC
* * * *
5339846 GGTCATTTTCATTTTCTGACTCGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5339880 TTATCGTTTTCATTTTTTGACT-AGTGATTTAATCCC
1 -GATCATTTTCATTTTTTGACTCA-TGATTTAATCTC
* *
5339916 GATCATTTT--TTATTTCTGACTCGTGATTTAACCT-
1 GATCATTTTCATT-TTT-TGACTCATGATTTAATCTC
* * * *
5339950 TAGTCGTTGTCATTTTCTTGACTCATGATTTAATCCC
1 GA-TCATTTTCATTTT-TTGACTCATGATTTAATCTC
* * * * *
5339987 GA-CTATTTTCATTTCTTAACTCACGATTTAAACCC
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * *
5340022 AATTGTATTCAGTTTTTGACTCGTGGTTTAATCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5340057 GGTCGTTTTCATTTTTTGACTCACGATTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5340092 GATCTTTTTTATTTTCTAACTCGT-AGTTTAAT-AC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * *
5340126 AAGTCATTTTCATTTTTTGACTCA-CAGTTTAATCCC
1 GA-TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
** * *
5340162 GATCATTTTCA-TTTTTGAACTTGTGATTTAATTTT
1 GATCATTTTCATTTTTTG-ACTCATGATTTAATCTC
* * * * * * * *
5340197 GGTCATTTTCGTTCTCTAACAT-GTGATTTAGTTTC
1 GATCATTTTCATTTTTTGAC-TCATGATTTAATCTC
** * *
5340232 -AGTGGTTTTGATTTTTTGACTCATGATTTATTCTC
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5340267 -AGT-AGTTTTTGA-TTTTTGACAT-GTGATTTAATATC
1 GA-TCA--TTTTCATTTTTTGAC-TCATGATTTAATCTC
* * * **
5340302 GATAATTTTCATTTCTCTGACTCATGATATAATGAC
1 GATCATTTTCATTT-TTTGACTCATGATTTAATCTC
* ** * ** *
5340338 GGTTGTTTTTAATTTTTTGACTTGTGATGTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * *
5340374 GATGGTTTTCATTTTTTTACTCACGATTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5340408 TGATCATTTTCATTTTTTGGCTCGTGGTTTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** ** * * * * *
5340444 GGTTGTTTTGGTTTTCTAACTCACGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5340479 GGTCATTTTCATTTTTTGACTTACGGTTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* * *
5340514 CATCGTTTT--TTTTCGTTGACCCATGATTTAATC-C
1 GATCATTTTCATTTT--TTGACTCATGATTTAATCTC
* * *
5340548 TAGTCATTTTCATTTTTTTG-CTTCGTGATTTAATCCTT
1 GA-TCATTTTCA-TTTTTTGAC-TCATGATTTAAT-CTC
** * *
5340586 G-TTGTTTTCATTTTTTGACTCGTGATTTAAT-TGT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* ** ** * *
5340620 GGTTGTTTTCATTATCTAAGACGC--GATCTAATCACTC
1 GATCATTTTCATT-T-TTTGACTCATGATTTAAT--CTC
* * * *
5340657 G--CATTTTCATTTTATGACTCGTGGTTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5340690 -AGTAATTTTCATTTTCTGACTCAT-AGTTTAATCTC
1 GA-TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * *
5340725 GATCATTTTCATTTTCTGACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5340759 TGATCGTTTTTCTTTTTTTGACTGGTGGTTTAATC-C
1 -GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5340795 TGGTTGTTTCCATTTTTTGACT--TGCAGTTTAATTTG
1 -GATCATTTTCATTTTTTGACTCATG-A-TTTAATCTC
* * * ** **
5340831 GCTCGTTTTCATTTTCTGACTCATGGCTTAATCAG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5340866 GATTATTTTCATTTTTTGACTCGTGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5340901 TATCATTTTTCTTTTTTTCA-TTA-GTAGTTTAATC-C
1 GATCA-TTTTCATTTTTTGACTCATG-A-TTTAATCTC
* * ** * *
5340936 GAATCATTTTAATTTTCTGACTGGTGGTTTAATCCTT
1 G-ATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * ** * *
5340973 G-TCGTTTTCATTTTCTGACTTGTGGTTTAATCTG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5341007 GGTTGTTTTCATTTTTTGACTCACGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** * *** * * *
5341042 CATCGTTTTGGTCTTCCAACTCACGGTTTAATCGC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5341077 GGTCATTTTCATTTTTTTGACTTACGATTTAATTTC
1 GATCATTTTCA-TTTTTTGACTCATGATTTAATCTC
* * * * * *
5341113 GGTAATTTTTCATTTTTTTTACTCATGTTTTTATCAC
1 GATCA-TTTTCA-TTTTTTGACTCATGATTTAATCTC
* * * * * *
5341150 GATCGTTCTCATTTCTTGACTCGTGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *** * * *
5341185 AATCGCATTCATTTTCTGACTCATGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5341220 AATCATTTTTTTTCATTTTTTTATCGTTCTCATG-TTCTAA-CTC
1 GATCA----TTTTCA--TTTTT-T-G-ACTCATGATT-TAATCTC
* * * ** * * *
5341263 GTAGCTTAATTCTAGTCATTTTCTAACTTGTGGTTTAGTCCC
1 G-A---TCATT-T--TCATTTTTTGACTCATGATTTAATCTC
* * * *
5341305 GATCATTTTTTTCTCATTTTTCGA-TC--GTTTTCATTTTC
1 GATCA----TTT-TCATTTTTTGACTCATGATTT-AATCTC
** ** ** * * * *
5341343 TGA-C-TCGTGGTTTAAT-CCTAAAG-GTT--T-TC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * ** *
5341372 -AT-TTTTTGACTTAATGTTTAATCTCGATCGTTTTCCTTTTTC
1 GATCATTTTCA-TT--T-TTTGA-CTC-AT-GATTT--AATCTC
* * * *** * * ** *
5341414 TAGCTAGTGGTTTAATCTCGGTCATTTTCATTTTTTGA-CTC
1 GATC-A-T--TTTCAT-TTTTTGA--CTCATGATTTAATCTC
* * * * ** * * *
5341455 G-TGATTTAATCCTTATCGTTTTCAGTTTTTGA-CTAGTGACTT
1 GATCATTT--T-C--AT-TTTTTGA-CTCATGATTTAAT--CTC
* ** ** *
5341497 AATCCCGATCATTTTTTATTTCTGACTCGTGATTTAATCTC
1 GAT--C-ATTTTCA-TT-TTT-TGACTCATGATTTAATCTC
* * * * *
5341538 AATCGTTGTCATTTCTTGACTCATGATTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * * *
5341573 GATTGTTTTCATTTTTTAACTTACGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * *
5341608 GATTGTATTCATTTTTTGACTCGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5341642 TGGTCGTTTTCATTTTTTGACTCATGGTTTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5341678 GATCGTTTTCAGTTTTTGGCTC--GCAGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATG-A-TTTAATCTC
* * * * ***
5341713 GATCTTTTTTATTTTCTAACTCAT-AGTTTAATAGG
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * * *
5341748 GGTCATTTTCTTTTTTTGACTTAGGGTTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* * ** ***
5341783 CATCGTTTTTGTTCCCTGACTCATGATTTAATGCT-
1 GATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * *
5341818 GGTCATTTTCATTTTTCTGATTCGTGATTTAATCCTC
1 GATCATTTTCATTTTT-TGACTCATGATTTAAT-CTC
** * * * * *
5341855 G-TTGTTTTCATTTTCTGACTCGTGATTTACTTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** ** * *
5341889 GGTTGTTTTCATTATCTAAGA-TGC--GGTCTAATCCCTC
1 GATCATTTTCATT-T-TTTGACT-CATGATTTAAT--CTC
** * * *
5341926 G--CATTTTCATTTTAAGACTCGTGGTTTAGTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5341959 AATCATTTTCATATTTTGACTTAT-AGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * *
5341994 GATCATTTTCATTTTCTGACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5342028 TGATCGTTTTTCTTTTTTTTGACTGGTGGTTTAATC-C
1 -GATC-ATTTTC-ATTTTTTGACTCATGATTTAATCTC
* * * ***
5342065 TGGT-TTTTTCCCTTTTTTGACTTGCGATTTAATC-C
1 -GATCATTTT-CATTTTTTGACTCATGATTTAATCTC
* * * * * ** **
5342100 GGCTCGTTTTAATTTTCTGACTTATGGCTTAATCAG
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5342136 GATTATTTTCATTTTTTTACTCATGGTTTAATCATA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5342172 G-TCATTTTCATTTTTTGACTAACGGTCTAATCGT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5342206 GGTCCTTTTTCATTTTTTGACTCGTGGTTTAATCCC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5342242 TATCATTTTTCTTTTTTTGA-TGGT-ATTTTAATCCC
1 GATCA-TTTTCATTTTTTGACTCATGA-TTTAATCTC
* * ** * *
5342277 AATCGTTTTCATTTTTTGACTTGTCG-TTTAACCCC
1 GATCATTTTCATTTTTTGACTCAT-GATTTAATCTC
** * * * ** * *
5342312 GGCCTTTTTTATTTTCTGACTTGTGGTTTAATCTG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5342347 GGTTGTTTTCATTTTTTGACTCACGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5342381 -ATGCCCTTTTCATCTTTCGCCTCATGGTTTAATCGT-
1 GAT--CATTTTCATTTTTTGACTCATGATTTAATC-TC
* *
5342417 GGTCATTTTCATTTCTTTGACTTATGATTTAATCTC
1 GATCATTTTCATTT-TTTGACTCATGATTTAATCTC
* * *
5342453 GATCGTTCTTCATTTTTTGACTCGTGTTTTAATCAT-
1 GATCATT-TTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5342489 GATCGTTTTCATTTCTTGACTCTTGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*** * * *
5342524 GATCGCATTCATTTTCTGACTCATGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5342559 AATCATTTT--TCTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5342583 TATCGTTCTCATTTTCTAACTCGT-AGCTTAAT-TC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * *
5342617 CAGTCATTTTCATTTCCTGACTCACGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** * *
5342652 TGTTTATTTTTTTTTTTCTGACTGC-TGGTTTAATCCC
1 -GATCATTTTCATTTTT-TGACT-CATGATTTAATCTC
* *
5342689 GATCATTTTCATTTTCTGACTCATGGTTTAATCT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5342723 TAGTCGTTTCCATTTTCT-AGCTCATGCTTTAATCTA
1 GA-TCATTTTCATTTTTTGA-CTCATGATTTAATCTC
*
5342759 GGTCATTTTC-TTTTTCTGACTCAATG-TTTAATC-C
1 GATCATTTTCATTTTT-TGACTC-ATGATTTAATCTC
* ** * * *
5342793 CACTTGTTTTCATTTTCTGACTCGTGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5342828 AGGTTGTTTTTCATTTTTTAACTCGT-ACTTTAATC-C
1 --GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5342864 CAGTCATTTTCATTTCTTGACTCATGATTCAAACT-
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* *** * * * * *
5342899 GGTCGCATTCATTTTCTAACTCGTGGTTTAGTC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5342933 TGATCATTTTTTTTCATTTTTTGA-TC--GTTTTCATTTTC
1 -GATCA----TTTTCATTTTTTGACTCATGATTT-AATCTC
* * * ** ** * *
5342971 TAAC-TTGTGGTTTAAT-A-TCAATCGTTTTCAT-T-
1 GATCATTTTCATTTTTTGACTC-AT-GATTTAATCTC
* ** * * * * *
5343003 -TTC-TAACTCAATGTTTAATCTCGGTCATTT--TC-C
1 GATCAT-TTTCATTTTTTGA-CTC-ATGATTTAATCTC
* ** * * * * * *
5343036 --T-TTTTCTGGCTAGTGGTTTAATCCCGGTCATTTTCATTTTC
1 GATCATTT-T--C-A-TTTTTTGA-CTC-ATGA-TTT-AATCTC
* * * * ** ** * *
5343077 TGACTCGTGGTTTAATCCTTATCGTTTTCATTTTTTGA-CTA
1 -GA-TCAT--TTTCAT--TTTTTG-ACTCATGATTTAATCTC
* **
5343118 GTATTTAATCCCGGTCATTTTTTATTTCTGACTCATGATTTAATCTC
1 G-A--TCAT---TTTCATTT-----TT-TGACTCATGATTTAATCTC
* * * *
5343165 -AGTCGTTATCATTTCTTGACTCATGATTTAATCCC
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * * * *
5343200 GATTGTTTTCATTTCTTAACTTACGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * *
5343235 GATTGTATTCATTTTTTGACTCGTGGTTTAATCCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * * *
5343271 -ATCGTTTTTATTTTTTCACTCATGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** *
5343305 GGTCATTTTTATTTTCTGACTCGCGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5343340 GATCTTTTTTATTTTCTAACT--TGTAGTTTAATAC-G
1 GATCATTTTCATTTTTTGACTCATG-A-TTTAAT-CTC
* * *
5343375 GGTCATTTTCATTTTTTGACTAAT-AGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * ** *
5343410 GATCAGTTTCATTTTTTTAACTTGTGATTTAATTTC
1 GATCATTTTCA-TTTTTTGACTCATGATTTAATCTC
* * * * * * *
5343446 GATCACTTTTCGTTCTCTAACAT-GTGATTTAGTTTC
1 GATCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
** * * *
5343482 GATGGTTTTGATTTTCTGACTCATGATTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5343517 -AGT-AGTTTTCAATTTTTGACAT-GTGATTTAATTTC
1 GA-TCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
* **
5343552 GATCATTTTCATTTCTCTGACTCATGATTTAATGAC
1 GATCATTTTCATTT-TTTGACTCATGATTTAATCTC
* ** ** *
5343588 GGTTGTTTTTCATTTTTTGACTTGTGATGTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * *
5343624 GATGGTTTTCATTTTTTGACTCACGGTTTAATCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5343659 GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** ** * * * * * *
5343694 GATTGTTTTGGTTTTCTAACTCACGATTAAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5343729 GGTCCTTTTCATTTTTTGACTTACGATTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* ** *
5343764 CATCACTTTT--TTTCGCTGACTCATAATTTAATC-C
1 GATCA-TTTTCATTT-TTTGACTCATGATTTAATCTC
* * *
5343798 TAGTCATTTTCATTTTTTTGATTCATGATTTAATCCTT
1 GA-TCATTTTCA-TTTTTTGACTCATGATTTAAT-CTC
** * * * *
5343836 G-TTGTTTTTATTTTCTGACTCGTGATTTAAAT-TT
1 GATCATTTTCATTTTTTGACTCATGATTT-AATCTC
* ** * * ** * *
5343870 GGTTGTTTTCATTATCT-A-AAATGCGGTCTAATCCCTC
1 GATCATTTTCATTTTTTGACTCAT--GATTTAAT--CTC
* * *
5343907 G--CATTTTCATTTTATGACTCATGGTTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5343940 -AGTAATTTTCATTTTCTGACTCAT-ACTTTAATCTC
1 GA-TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * * *
5343975 AATCTTTTTTATTTTTTGACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** *
5344009 TGATCGTTTTTCTTTTTTTGATTGGTGGTTTAATC-C
1 -GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *** *
5344045 TGGTTGTTTCCATTTTTTGACTTGCGGTTTAATCT-
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** **
5344080 AACTCGTTTTCATTTTTTGACTCATGGCTTAATCAG
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5344116 GATTATTTTCATTTTTTGACTCATGGTTTAATCATA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * *
5344152 G-TCATTTTCATTTTTTGACTCGTGGTCTAATCGT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5344186 GGTCCTTTTTCATTTTTTGACTCGTGGTTTAATCCC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * ** *
5344222 TATCATTTTTCCCTTTTTCATTGGT-AGTTTAATCCC
1 GATCA-TTTTCATTTTTTGACTCATGA-TTTAATCTC
* * ** *
5344258 AATCATTTTCATTTTCTGACTTGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * ** * *
5344292 TGGCCGTTTTCATTTTCTGACTTGTGGTTTAATCTG
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5344328 GGTTGTTTTCATTTTTTGACTCACGATTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *** * *
5344363 CATCGTTTTCATCTTCCAACTCACGGTTTAATCGT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5344398 GGTCATTAATTTCATTTTTTTGACTTACGATTTAATTTC
1 GATCA-T--TTTCA-TTTTTTGACTCATGATTTAATCTC
* * * *
5344437 GATCATTCTTCATTTTTTTGACTCGTGTTTTTATCAC
1 GATCATT-TTCA-TTTTTTGACTCATGATTTAATCTC
* * * *
5344474 GATCATTTTCATTTCTTGACTCGTGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * *
5344509 GATCAAATTCATTTTCTAACTCATGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5344544 AATCATTTT--TCTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5344568 TATCGTTCTCATTTTCTAACTCGT-AGCTTAAT-TC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * *
5344602 TAGTCATTTTCATTTCCTGACTCACGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *** * *
5344637 TGTTCATTTTTTC-TTTTTCTAACTGGCGGTTTAATCCC
1 -GATCA--TTTTCATTTTT-TGACTCATGATTTAATCTC
* * * *
5344675 AATCATTTCCATTTTCTGACTCATGGTTTAATCT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * * * *
5344709 TAGTCGTTTCCATTTTCTGGCTCGTGCTTTAATTTA
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5344745 GGTCATTTTC-TCTTTCTGACTCATTG-TTTAATC-C
1 GATCATTTTCAT-TTTTTGACTCA-TGATTTAATCTC
* ** * * * *
5344779 CACTTGTTTTCGTTTTCTGACTCGTGGTTTAATC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * *
5344814 AGGTTGTTTTTTATTTTTTGACTCGT-ATTTTAATC-C
1 --GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * * *
5344850 CAGTCATTTTCATTTCTTGACTCATGATTCAAACTA
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
*** * * * * *
5344886 G-TCGCATTCATTTTCTAACTCATGGTTTAGTCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
5344920 GATCA-TTT--TTTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5344943 GATCGTTTTCATTTTTTGACTCTTGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5344978 AATCGTTTTCCTTTTCTGACTCAATG-TTTAATCTC
1 GATCATTTTCATTTTTTGACTC-ATGATTTAATCTC
** * *
5345013 GATCGCTTTCCTTTTTCT-AGCT-AGTGGTTTAATCTC
1 GATCATTTTCATTTTT-TGA-CTCA-TGATTTAATCTC
* * *
5345049 GGTCATTTTCATTTTCTGACTCATGGTTTAAT-TC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5345083 TTATTGTTCTCACTTTTTGACT-AGTGATTTAATCCC
1 -GATCATTTTCATTTTTTGACTCA-TGATTTAATCTC
* * *
5345119 GGTCATTTT-TTATTTTTGACTCGTGATTTAATCTC
1 GATCATTTTCAT-TTTTTGACTCATGATTTAATCTC
* * * *
5345154 -AGTCGTTGTCATTTCTTGACTCATGATTTATTC-C
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * * *
5345188 TGATTGTTTTCATTTCTTAACTCGTGATTTAAACCC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5345224 GATCATATTCATTTTTTGACTCGTGATTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5345258 TGGTCGTTTTCATTTTTTGACTCATGGTTTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** *
5345294 GATCGTTTTCATTTTTTGACTCGCGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5345329 GATCTTTTTTATTATCTAACTCGT-AGTTTAATAC-G
1 GATCATTTTCATTTTTTGACTCATGA-TTTAAT-CTC
* *** *
5345364 GGTCATTTTCATTTTTTGACTCGCAATTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** * *
5345399 GGTCATTTTCATTTTTTAACTTGTGAGTTAATTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5345434 -AGTCATTTTTCATTCTCTGACAT-GTGATTTAGTTTC
1 GA-TCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
* ** * * * *
5345470 GGTGGTTTTGATTTTCTGACTCACGATTTATTCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5345505 -AGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATC
1 GA-TCA-TTTTC-ATTTTTTGAC-TCATGATTTAATCTC
* **
5345540 GATCGTTTTCATTTCTTTGACTCATGATTTAATGAC
1 GATCATTTTCATTT-TTTGACTCATGATTTAATCTC
** * **
5345576 GATTTTTTTTTCATTTTTTGATTTGTGATTTAATCTC
1 GA--TCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5345613 GATCGTTTTCTTTTTTTGACTTACGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5345647 TGATCATTTTCATTTTTTGGCTCATGGTTTAATCTT
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * *
5345683 GGTTGTTTTTATTTTTTGACTCACGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5345718 GGTCATTTTCATTTTTTGACTTACGATTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* * * ***
5345753 CATCGCTTTT-GTTCGCTGACTCATGATTTAATC-C
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5345787 TGGTCATTTTCATTTTTTTGATTCGTGATTTAATCCTT
1 -GATCATTTTCA-TTTTTTGACTCATGATTTAAT-CTC
** * * *
5345825 G-TTGTTTTCATTTTTTGACTCGT-ATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * ** ** *
5345858 GGT--TGTTTCATTATCTAAAACGCGATCTAATCCCTC
1 GATCAT-TTTCATTTTTTGACTCATGATTTAAT--CTC
* * * *
5345894 G-T-ATTTTCATTTTATGACTCGTGATTTATTTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5345927 -AGTAATTTTCATTTTCTAACTCAT-AGTTTAATCTT
1 GA-TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* *
5345962 GATCATTTTCATTTTCTGAC-CAATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTC-ATGATTTAATCTC
* * *
5345996 TGATCGTTTTTCTTTTTTTGACT-AGTGGTTTAATC-C
1 -GATC-ATTTTCATTTTTTGACTCA-TGATTTAATCTC
* ** * * * *
5346032 TGGTTGTTTCCATTTTTTGACTTAT-AGTTTAATGTA
1 -GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
** * ** * ** **
5346068 GCCCGTTTTCATTTTCAGACCCATGGCTTAATCAG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5346103 GATTATTTTCATTTTTTGACTCATGGTTTAATCATA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5346139 G-TCGTTTTCATTTTTTAACTCGTGGTCTAATCGT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5346173 GGTCCTTTTTCATTTTTTGACTCGTGGTTTAATCGC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** *
5346209 TATCATTTTTCATTTTTTCATTGGT-AGTTTAATCCC
1 GATCA-TTTTCATTTTTTGACTCATGA-TTTAATCTC
* * **
5346245 AATCGTTTTCATTTTTTGACTCATGGCTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5346280 GATCGTTTTCATTTTTTGGCTCGCA-GA-TTAATCTC
1 GATCATTTTCATTTTTTGACT--CATGATTTAATCTC
* * * * ***
5346315 GATCTTTTTTATTTTTTAACTTAT-AGTTTAATAGA
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5346350 GGTCATTTTCATTTTTTGACTTACGGTTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* * * *** *
5346385 CATCGCTTTT-GTTCCCTGACTCACGATTTAATC-C
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5346419 TAGTCATTTTTATTTTTCTAATTCATGATTTAATCCTC
1 GA-TCATTTTCATTTTT-TGACTCATGATTTAAT-CTC
** * * * *
5346457 G-TTGTTTTCATTTTCTGACTCGTGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * *
5346491 GGTTGTTTTCATTATCTGA--GATGCAATCTAATCCCTC
1 GATCATTTTCATTTTTTGACTCATG--ATTTAAT--CTC
** * * * *
5346528 G-T-ATTTTCATTTTAAGACTCGTGGTTTATTTTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*
5346561 -AGTCATTTTCATTTTCTGACTCAT-AGTTTAATCTC
1 GA-TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * *
5346596 GATCATTTTCATTTTCTGACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * **
5346630 TGATCGTTTTTCTTTTTTTGACTGGTGATTTAATC-C
1 -GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *** *
5346666 TGGTTGTTTCCATTTTTTAACTTGCGGTTTAATC-C
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * ** **
5346701 GGCTCGTTTTAATTTTCTGACTCATGGCTTAATCAG
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5346737 GATTATTTTCATTTTTTGACTCGTGGTCTAATCGT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5346772 GGTCCTTTTTCATTTTTTGACTCGTGGTTTAATCCC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5346808 TATCATTTTTCTTTTTTTGA-TGGT-ATTTTAATCCC
1 GATCA-TTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * *
5346843 AATCATTTTCATTTTTTGACTTGTCATTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * ** * *
5346878 GACCGTTTTTATTTTCTGACTTGTGGTTTAATCTG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * *
5346913 GGTTGTTTTCACTTTTTGACTCACGGTTGAATCCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAAT-CTC
* * ** * * *
5346949 G-TCCTTTTCATATTTCAACTCACGGTTTAATCGC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5346983 GGTCATTTTCATTTTTTTGACTTATGATTTAATCAC
1 GATCATTTTCA-TTTTTTGACTCATGATTTAATCTC
* * * *
5347019 GATCATTTTCATTTCTTGACTCGTGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*** * * * *
5347054 GATCGCATTCATTTTCTGGCTCATGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5347089 AATCATTTT--TCTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5347113 TATCGTTCTCATTTTCTAACTCGT-AGCTTAAT-TC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
*
5347147 CAGTCATTTTCATTTTTTGACTCAT-AGTTTAATCTC
1 GA-TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * *
5347183 GATCATTTTCATTTTCTGACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** *
5347217 TGATCGTTTTTCTTTTTTTGATTGGTGCTTTAATC-C
1 -GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * *
5347253 TGGTTGTTTCCATTTTTTGACTTACGGTTTAATCTG
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** **
5347289 GCTCATTTTCATTTTCTGACTCACGGCTTAATCAG
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5347324 GATTATTTTCATTTTTTGACTCATGGTTTAATCATA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5347360 G-CCATTTTCATTTTTTGACTCGTGGTCTAATCAT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * * *
5347394 GGTCCTTTTTCATTTTTTGACTCGTGGTTTAATCCC
1 GAT-CATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ***
5347430 TATCATTTTTCTTTTTTTCA-TGGGGAGTTTAATC-C
1 GATCA-TTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * * *** * *
5347465 TAATGGTTTTCATTTTCTAACTTGCGGTTTAATCTAT
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
** * * *
5347502 G-TTGTTTTCATTTTTTGACTCACGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5347536 CATCGTTTTCATCTTTCGACTCATGGTTTAATCGC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
***
5347571 GATCATTTTCATTTTTTCGACTTGCGATTTAATCTC
1 GATCATTTTCATTTTTT-GACTCATGATTTAATCTC
* * * * *
5347607 GGTCGTTCTTCATTTTTTGACTCGTGTTTTAATCAC
1 GATCATT-TTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5347643 GATCGTTTTCATTTCTTGACTCGTGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
*** * * *
5347678 GATCGCATTCATTTTCTGACT-ATGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5347712 AATCATTTT--TCTTTT---TCAT--TTT--T-T-
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * *
5347736 TATCATTCTCATTTTCTAACTCGT-AGCTTAAT-TCC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCT-C
* ** *
5347771 AATCATTTTCATTTCCTGACTCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** *
5347805 TGTTCATTTTTCTTTTTTTGATTGGTGGTTTAATC-C
1 -GATCA-TTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5347841 CAGTCA-TTTCTATTTTCTGACTCATGGTTTAATCT-
1 GA-TCATTTTC-ATTTTTTGACTCATGATTTAATCTC
* * * * * * * *
5347876 TAGTCGTTTCCA-TTTCTGGCTCGTGCTTTAATCTA
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
*
5347911 GGTCATTTT--TTTTTCTGACTCAATG-TTTAATC-C
1 GATCATTTTCATTTTT-TGACTC-ATGATTTAATCTC
* ** * ** *
5347944 CACTTGTTTTCGTTTCCTGACTCATTG-TTTATTCTC
1 GA-TCATTTTCATTTTTTGACTCA-TGATTTAATCTC
* *
5347980 -AGT-AGTTTTCGA-TTTTTGACAT-GTGATTTAATATC
1 GA-TCA-TTTTC-ATTTTTTGAC-TCATGATTTAATCTC
*
5348015 GATCATTTTCATTTCTCTGACTCATGATTTAATAACT-
1 GATCATTTTCATTT-TTTGACTCATGATTTAAT--CTC
* ** * **
5348052 GTTGTTTTTCATTTTCTGACTTGTGATTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5348087 GATCGTTTTCTTTTTTTGAACACA-G-TTTAA--TC
1 GATCATTTTCATTTTTTG-ACTCATGATTTAATCTC
* * *
5348119 -AT-TTTTTTA-TTTTTGACTCGTGATTTAA-C-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5348149 CAGTCGTTGTCATTTCTTGACTCATGATTTAATCTC
1 GA-TCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * * * *
5348185 GATTGTTTTCATTTCTTAACTCACGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * * *
5348220 GATTGTATTCATTTTTTGACTCGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** *
5348254 TGGTCGTTTTCATTTACTAACTCATGATTTAATCTC
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5348290 AATCTTTTTTATTTTCTAACTCGT-AGTTTAATAC-G
1 GATCATTTTCATTTTTTGACTCATGA-TTTAAT-CTC
* * *
5348325 GGTCATTTTCATTTTTTGACTCA-CAGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* ** * *
5348360 GATCATTTTCATTTTTTAACTTGTGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * * * *
5348395 GGTCATTTTTCGTTCTCTGACAT-GTGATTTAGTTTC
1 GATCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
**** * *
5348431 G-GGGGTTTCGATTTTCTGACTCATGATTTATTCTC
1 GATCATTTTC-ATTTTTTGACTCATGATTTAATCTC
* * *
5348466 -AGT-AGTTTTCAATTTTTGACAT-GTGATTTAATATC
1 GA-TCA-TTTTCATTTTTTGAC-TCATGATTTAATCTC
*
5348501 GATCATTTTCATTTCTCTGACTCATGATTTAA-CGAT-
1 GATCATTTTCATTT-TTTGACTCATGATTTAATC--TC
* ** * * **
5348537 GGTTGTTTTAATTTTCTGACTTGTGATTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5348572 GATCGTTTTCATTTTTTGACTCACGGTTTAGTCTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* *
5348607 GATCATTTTCATTTTTTGACTCGTGGTTTAATCTC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5348642 GGTTGTTTTTATTTTTTGACTCATGATTTAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * * *
5348677 GGTCATTTTCATTTTTTGGCTTACGATTT-ATTTCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCT-C
* * **
5348712 CATCACTTTT-GTTCCTTGACTCATGATTTAATC-C
1 GATCA-TTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5348746 TAGTCATTTTCATTTTTTTGATTCGTGATTTAATCATT
1 GA-TCATTTTCA-TTTTTTGACTCATGATTTAATC-TC
** * * * *
5348784 G-TTGTTTTCATTTTTTGACTCGTGATATAATTTT
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** ** * * *
5348818 GGTTGTTTTCATTATCTAAGACGC--GGTCTAATCCCTC
1 GATCATTTTCATT-T-TTTGACTCATGATTTAAT--CTC
* * * *
5348855 -AT-ATTTTCATTTTATGACTCGTGATTTATTCTTA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
*
5348889 GTCATTTTCATTTTCATTTTCTGACTCAT-AGTTTAATCTC
1 G--A---TCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * * *
5348929 GATCATTTTCATTTTCTAACCCATGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
** * ** *
5348963 TGATCATTTTTTTTTTTTTACTGTTGGTTTAATC-C
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * * * *
5348998 TGGTTGTTTCCATTTTTTAACTTATGGTTTAATCTG
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** **
5349034 GCTCGTTTTCATTTTTTGACTCATGGCTTAATCAA
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5349069 GATTATTTTCATTTTTTGACTCATGGTTTAATCATA
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5349105 G-TCATTTTCATTTTCTGACTCGTGGTCTAATCGT-
1 GATCATTTTCATTTTTTGACTCATGATTTAATC-TC
* * * *
5349139 GGTCTTTTTTCATTTTTTGACTCGTGGTTTAATC-C
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
* * * *
5349174 TTATCATTTT--TTTTGATGGCT-A-G-TTTAATCCC
1 -GATCATTTTCATTTT-TTGACTCATGATTTAATCTC
* ** * * * ** *
5349206 AATTGTTTCCATTTTCTAACTGGTGGTTTAATC-C
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * * ** * *
5349240 TGGTCGTTTTCATTTTCTGACTTGTGGTTTAATCTA
1 -GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* ** * * *
5349276 GGTTGTTTTCATTTTTTGACTCACGGTTTAATCCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * ** * *
5349311 TG-TCCTTTTCATCTTCCGACTCA-CAGTTTAATCAC
1 -GATCATTTTCATTTTTTGACTCATGA-TTTAATCTC
* * **
5349346 -AGTAATTTTTATTTTTTTGACTTGTGATTTAATCTC
1 GA-TCATTTTCA-TTTTTTGACTCATGATTTAATCTC
* * ** * *
5349382 GGTCGTTCTTCATTTTTTGACTTGTGTTTTAATCCAC
1 GATCATT-TTCATTTTTTGACTCATGATTTAAT-CTC
* * * *
5349419 GATCGTTTTCA-TTCTTGACTCATGATTTAAACCC
1 GATCATTTTCATTTTTTGACTCATGATTTAATCTC
* * *
5349453 GATCGA-ATTCATTTTATGACTCATG-TTTAATCCC
1 GATC-ATTTTCATTTTTTGACTCATGATTTAATCTC
*
5349487 AATCATTTTC-TTTTTT
1 GATCATTTTCATTTTTT
5349503 CATTTTTTAT
Statistics
Matches: 12190, Mismatches: 3419, Indels: 2376
0.68 0.19 0.13
Matches are distributed among these distances:
22 4 0.00
23 15 0.00
24 62 0.01
25 4 0.00
26 67 0.01
27 5 0.00
28 37 0.00
29 64 0.01
30 55 0.00
31 49 0.00
32 83 0.01
33 297 0.02
34 654 0.05
35 7613 0.62
36 2347 0.19
37 426 0.03
38 56 0.00
39 48 0.00
40 69 0.01
41 121 0.01
42 27 0.00
43 22 0.00
44 24 0.00
45 8 0.00
46 19 0.00
47 7 0.00
48 7 0.00
ACGTcount: A:0.19, C:0.18, G:0.13, T:0.50
Consensus pattern (35 bp):
GATCATTTTCATTTTTTGACTCATGATTTAATCTC
Found at i:5333540 original size:177 final size:175
Alignment explanation
Indices: 5333178--5333542 Score: 374
Period size: 177 Copynumber: 2.1 Consensus size: 175
5333168 TTAATCTGGC
* *
5333178 TCGTTTTCATTTTCTGACTAATGGCTTATCAGGATTATTTTCATTTTTTGACTCATGGTTTAATC
1 TCGTTTTCATTTTCTGACTAATGGCTTATCAGGATTATTTTCATTTTCTGACTCACGGTTTAATC
* * ** * * * ****
5333243 ACAGTCATTTTCATTTTTTGACTCGTGGTTTAATCGTGGTCCTTTTTCATTTTTTTACTCGTGGT
66 ACAGTCATTTTCATCTTCTGACTCACGATTTAATCGCGGTCCATTTTCATTTTTTTACTCACAAT
* * * *
5333308 TTAATCCCTATCATTTTTCTTTTTTTGATGGGTAGTTTAATCCCAA
131 TTAATCCCGATCATTCTTCATTTTTTGATGGGTA-TTTAATCACAA
* * * * * *
5333354 TCATTTTCATTTTCTGACTTATGGTTTAATCTGGGTTGTTTTCATTTTCTGACTCACGGTTTAAT
1 TCGTTTTCATTTTCTGACTAATGGCTT-ATCAGGATTATTTTCATTTTCTGACTCACGGTTTAAT
* * * *
5333419 CCCCGTCGTTTTCATCTTCTGACTCACGATTTAATCGCGGT-CATTTTCATTTTTTTGACTTACA
65 CACAGTCATTTTCATCTTCTGACTCACGATTTAATCGCGGTCCATTTTCATTTTTTT-ACTCACA
* * * * * *
5333483 ATTTAATCTCGGTCGTTCTTCATTTTTTGACTCGTGT-TTTTATCACGA
129 ATTTAATCCCGATCATTCTTCATTTTTTGA-T-GGGTATTTAATCACAA
5333531 TCGTTTTCATTT
1 TCGTTTTCATTT
5333543 CTTGAGTCGT
Statistics
Matches: 151, Mismatches: 34, Indels: 7
0.79 0.18 0.04
Matches are distributed among these distances:
176 38 0.25
177 109 0.72
178 1 0.01
179 3 0.02
ACGTcount: A:0.17, C:0.18, G:0.14, T:0.50
Consensus pattern (175 bp):
TCGTTTTCATTTTCTGACTAATGGCTTATCAGGATTATTTTCATTTTCTGACTCACGGTTTAATC
ACAGTCATTTTCATCTTCTGACTCACGATTTAATCGCGGTCCATTTTCATTTTTTTACTCACAAT
TTAATCCCGATCATTCTTCATTTTTTGATGGGTATTTAATCACAA
Found at i:5334270 original size:105 final size:103
Alignment explanation
Indices: 5334102--5334433 Score: 292
Period size: 106 Copynumber: 3.2 Consensus size: 103
5334092 TTTAATCACG
* * * * * **
5334102 GTCATTTTCATTTTCTGACTCGTGGTTTAA-CCCTTATTGTTTTAATTTTTTCACTAGTAATTTA
1 GTCATTTTCATTTTCTGACTCATGGTTTAATCCC-GATTGTTTTCA-TTTTTAACTCGCGATTTA
* *
5334166 ATCCCGATCATTTTTTA-TTTCTGACTCGTGATTTAATCTT
64 ATCCCGATC-TTTTTCATTTTCTGACTCGTGGTTTAATCTT
* * *
5334206 AGTCATTGTCATTTCCTGACTCATGATTTAATCCCGATTGTTTTCATTTCTTAACTCGCGATTTA
1 -GTCATTTTCATTTTCTGACTCATGGTTTAATCCCGATTGTTTTCATTT-TTAACTCGCGATTTA
* * * * *
5334271 AACCCGAT-TGTATTCATTTTTTGACTCATGGTTTAATCCT
64 ATCCCGATCT-TTTTCATTTTCTGACTCGTGGTTTAATCTT
* * * * * * *
5334311 GATCGTTTTCATTTTTTTCACTCATGGTTTAATCTCGATCGTTTTCATTTTCTGACTCGCGGTTT
1 G-TCATTTTCA-TTTTCTGACTCATGGTTTAATCCCGATTGTTTTCATTTT-TAACTCGCGATTT
* * *
5334376 AATCTCGATCTTTTTCATTTTCTGACTCGCGGTTTAATCTC
63 AATCCCGATCTTTTTCATTTTCTGACTCGTGGTTTAATCTT
* *
5334417 GATCTTTTTTATTTTCT
1 G-TCATTTTCATTTTCT
5334434 AACTTGTAGT
Statistics
Matches: 181, Mismatches: 38, Indels: 16
0.77 0.16 0.07
Matches are distributed among these distances:
103 1 0.01
104 8 0.04
105 85 0.47
106 86 0.48
107 1 0.01
ACGTcount: A:0.19, C:0.20, G:0.12, T:0.50
Consensus pattern (103 bp):
GTCATTTTCATTTTCTGACTCATGGTTTAATCCCGATTGTTTTCATTTTTAACTCGCGATTTAAT
CCCGATCTTTTTCATTTTCTGACTCGTGGTTTAATCTT
Found at i:5334465 original size:176 final size:175
Alignment explanation
Indices: 5333996--5334501 Score: 431
Period size: 176 Copynumber: 2.9 Consensus size: 175
5333986 TAATTTTTCA
* * * * * *
5333996 ATCATTTTCATTTTTTGACTCGTGGTGTAATCACAATCGTTTTCGTTTTCTGACTCAATGTTTAA
1 ATCATTTTCATTTTCTGACTCGTGGTTTAATCTCAATCATTTTCATTTTCTGACTCAAGGTTTAA
* * * * * * *
5334061 TCTCGGTCGTTTTCCT-TTTTCTAGCTAATGGTTTAATCACGGTCATTTTCATTTTCTGACTCGT
66 TCTCGATC-TTTT-TTATTTTCTAACTAGTAGTTTAAT-ACGGTCATTTTCATTTTTTGACTCAT
* * * *
5334125 GGTTTAACCCTTATTGTTTT-AATTTTTTCACTAGTAATTTAATCCCG
128 GGTTTAATCCTGATCGTTTTCATTTTTTTCACTAGTAATTTAATCCCG
* * * * * * * *
5334172 ATCATTTT-TTATTTCTGACTCGTGATTTAATCTTAGTCATTGTCATTTCCTGACTCATGATTTA
1 ATCATTTTCAT-TTTCTGACTCGTGGTTTAATCTCAATCATTTTCATTTTCTGACTCAAGGTTTA
* * * * * ** *
5334236 ATCCCGAT-TGTTTTCA-TTTCTTAACTCG-CGATTTAA-ACCCGATTGTATTCATTTTTTGACT
65 ATCTCGATCT-TTTTTATTTTC-TAACTAGTAG-TTTAATA--CGGTCATTTTCATTTTTTGACT
** *
5334297 CATGGTTTAATCCTGATCGTTTTCATTTTTTTCACTCA-TGGTTTAATCTCG
125 CATGGTTTAATCCTGATCGTTTTCATTTTTTTCACT-AGTAATTTAATCCCG
* * * * **
5334348 ATCGTTTTCATTTTCTGACTCGCGGTTTAATCTCGATCTTTTTCATTTTCTGACTCGCGGTTTAA
1 ATCATTTTCATTTTCTGACTCGTGGTTTAATCTCAATCATTTTCATTTTCTGACTCAAGGTTTAA
*
5334413 TCTCGATCTTTTTTATTTTCTAACTTGTAGTTTAATACGGGTCATTTTCATTTTTTGACTCA--G
66 TCTCGATCTTTTTTATTTTCTAACTAGTAGTTTAATAC-GGTCATTTTCATTTTTTGACTCATGG
*
5334476 TTTAAT-CTCGATCATTTTCATTTTTT
130 TTTAATCCT-GATCGTTTTCATTTTTT
5334502 AACTCGTGAT
Statistics
Matches: 257, Mismatches: 57, Indels: 34
0.74 0.16 0.10
Matches are distributed among these distances:
173 3 0.01
174 29 0.11
175 50 0.19
176 166 0.65
177 9 0.04
ACGTcount: A:0.19, C:0.19, G:0.13, T:0.49
Consensus pattern (175 bp):
ATCATTTTCATTTTCTGACTCGTGGTTTAATCTCAATCATTTTCATTTTCTGACTCAAGGTTTAA
TCTCGATCTTTTTTATTTTCTAACTAGTAGTTTAATACGGTCATTTTCATTTTTTGACTCATGGT
TTAATCCTGATCGTTTTCATTTTTTTCACTAGTAATTTAATCCCG
Found at i:5335027 original size:41 final size:41
Alignment explanation
Indices: 5334982--5335070 Score: 117
Period size: 41 Copynumber: 2.1 Consensus size: 41
5334972 TAATCCCTCG
* * *
5334982 CATTTTCATTTTATGACTCGTGGTTTATTCTC-AGTCATTTT
1 CATTTTCATTTTATGACTCATAGTTTAATCTCGA-TCATTTT
*
5335023 CATTTTCATTTTTTGACTCATAGTTTAATCTCGATCATTTT
1 CATTTTCATTTTATGACTCATAGTTTAATCTCGATCATTTT
5335064 CAATTTT
1 C-ATTTT
5335071 TGACCCATGG
Statistics
Matches: 42, Mismatches: 4, Indels: 3
0.86 0.08 0.06
Matches are distributed among these distances:
41 36 0.86
42 6 0.14
ACGTcount: A:0.20, C:0.17, G:0.09, T:0.54
Consensus pattern (41 bp):
CATTTTCATTTTATGACTCATAGTTTAATCTCGATCATTTT
Found at i:5336592 original size:71 final size:71
Alignment explanation
Indices: 5336334--5336658 Score: 184
Period size: 71 Copynumber: 4.6 Consensus size: 71
5336324 ATCTTGGTCG
*** * * * *
5336334 TTTTCATTTTCTGACTCACGATTTAATCTCGATCTTTTTTATTTTCTAACTCAT-AGTTTAAT-A
1 TTTTCATTTTCTGACTTGTGATTTAATATCGATCATTTTCATTTTCTGACTCATGA-TTTAATCA
*
5336397 C-G-GGT
65 CAGTAGT
* ** ** * * ** *
5336402 CATTTTCATTTTTTGAC-TCAG-TTTAATCCCGATCATTTTCATTTTTTAACTTGTGATTTAATT
1 --TTTTCATTTTCTGACTTGTGATTTAATATCGATCATTTTCATTTTCTGACTCATGATTTAATC
* *
5336465 TCAG-ACAT
64 ACAGTA-GT
* * * * * * ** * *
5336473 TTTTCGTTCTCTGACATGTGATTTAGTTTCGGT-GGTTTCGATTTTCTGACTCATGATTTATTCT
1 TTTTCATTTTCTGACTTGTGATTTAATATCGATCATTTTC-ATTTTCTGACTCATGATTTAATCA
5336537 CAGTAGT
65 CAGTAGT
* * * *
5336544 TTTTTATTTT-T-ACATTTTGATTTAATATTGATCATTTTCATTTCTCTGACTCATGATTTAATG
1 TTTTCATTTTCTGAC-TTGTGATTTAATATCGATCATTTTCATTT-TCTGACTCATGATTTAATC
*
5336607 ACAGTTGT
64 ACAGTAGT
* *
5336615 TTTTCATTTTCTGACTTGTGATTTAATCTCGATCGTTTTCATTT
1 TTTTCATTTTCTGACTTGTGATTTAATATCGATCATTTTCATTT
5336659 GTTGCCTCAC
Statistics
Matches: 191, Mismatches: 51, Indels: 24
0.72 0.19 0.09
Matches are distributed among these distances:
68 33 0.17
69 17 0.09
70 38 0.20
71 74 0.39
72 27 0.14
73 2 0.01
ACGTcount: A:0.21, C:0.15, G:0.12, T:0.52
Consensus pattern (71 bp):
TTTTCATTTTCTGACTTGTGATTTAATATCGATCATTTTCATTTTCTGACTCATGATTTAATCAC
AGTAGT
Found at i:5337049 original size:176 final size:175
Alignment explanation
Indices: 5336860--5337241 Score: 387
Period size: 176 Copynumber: 2.2 Consensus size: 175
5336850 AATCCTTGTT
** * *
5336860 GTTTTT-ATTTTTTGACTAGTGATTTAATTTTGGTTGTTTTCATTATCTAAGA-TGCGGTCTAAT
1 GTTTTTCATTTTTTGACTAGTGATTTAATCCTGGTTGTTTCCATT-TCT-AGACTACGGTCTAAT
* ** * *
5336923 CCCTCGCATTTTCATTTTATGACTCGTGGTTTATTCTCA-G-TCATTTTCAGTTTTTGACTCATA
64 CCCGCGCATTTTCATTTTATGACTCACGGCTTA--ATCAGGATCATTTTCAGTTTTTGACTCATA
* * * *
5336986 GTTTAATC-TCGATCATTTTCATTTTCTGACCCGTGGTTTAATCCTGATC
127 GTTTAATCATAG-CCATTTTCATTTTCTGACCCGTGGTCTAATCATGATC
* * * * * *
5337035 GTTTTTCTTTTTTTGATTGGTGCTTTAATCCTGGTTGTTTCCATTTCTTGACTTACGGTTTAATC
1 GTTTTTCATTTTTTGACTAGTGATTTAATCCTGGTTGTTTCCATTTCTAGAC-TACGGTCTAATC
** * * * * *
5337100 TGGCTCATTTTCATTTTCTGACTCACGGCTTAATCAGGATTATTTTCATTTTTTGACTCATGGTT
65 CCGCGCATTTTCATTTTATGACTCACGGCTTAATCAGGATCATTTTCAGTTTTTGACTCATAGTT
* * *
5337165 TAATCATAGCCATTTTCATTTTTTGACTCGTGGTCTAATCATGGTC
130 TAATCATAGCCATTTTCATTTTCTGACCCGTGGTCTAATCATGATC
* * *
5337211 TTTTTTCATTTTTTGACTCGTGGTTTAATCC
1 GTTTTTCATTTTTTGACTAGTGATTTAATCC
5337242 CTATCATTTT
Statistics
Matches: 167, Mismatches: 34, Indels: 11
0.79 0.16 0.05
Matches are distributed among these distances:
174 5 0.03
175 10 0.06
176 150 0.90
177 2 0.01
ACGTcount: A:0.18, C:0.17, G:0.15, T:0.50
Consensus pattern (175 bp):
GTTTTTCATTTTTTGACTAGTGATTTAATCCTGGTTGTTTCCATTTCTAGACTACGGTCTAATCC
CGCGCATTTTCATTTTATGACTCACGGCTTAATCAGGATCATTTTCAGTTTTTGACTCATAGTTT
AATCATAGCCATTTTCATTTTCTGACCCGTGGTCTAATCATGATC
Found at i:5337080 original size:141 final size:140
Alignment explanation
Indices: 5336935--5337240 Score: 303
Period size: 141 Copynumber: 2.2 Consensus size: 140
5336925 CTCGCATTTT
* * * *
5336935 CATTTTATGACTCGTGGTTTATTCTCAG-TCATTTTCAGTTTT-TGACTCATAGTTTAATCTCGA
1 CATTTT-TGACTCGTGGTTTAATCT-AGCTCATTTTCA-TTTTCTGACTCACAGCTTAATCACGA
* * * ** * * * *
5336998 TCATTTTCATTTTCTGACCCGTGGTTTAATCCTGATCGTTTTTCTTTTTTTGATTGGTGCTTTAA
63 TCATTTTCATTTTCTGACCCATGGTTTAATCAT-AGCCATTTTCATTTTTTGACTCGTGCTCTAA
*
5337063 TCCTGGT-TGTTTC
127 TCATGGTCTGTTTC
*** * * * *
5337076 CATTTCTTGACTTACGGTTTAATCTGGCTCATTTTCATTTTCTGACTCACGGCTTAATCAGGATT
1 CATTT-TTGACTCGTGGTTTAATCTAGCTCATTTTCATTTTCTGACTCACAGCTTAATCACGATC
* * *
5337141 ATTTTCATTTTTTGACTCATGGTTTAATCATAGCCATTTTCATTTTTTGACTCGTGGTCTAATCA
65 ATTTTCATTTTCTGACCCATGGTTTAATCATAGCCATTTTCATTTTTTGACTCGTGCTCTAATCA
* *
5337206 TGGTCTTTTTT
130 TGGTCTGTTTC
5337217 CATTTTTTGACTCGTGGTTTAATC
1 CA-TTTTTGACTCGTGGTTTAATC
5337241 CCTATCATTT
Statistics
Matches: 131, Mismatches: 29, Indels: 10
0.77 0.17 0.06
Matches are distributed among these distances:
140 34 0.26
141 93 0.71
142 4 0.03
ACGTcount: A:0.17, C:0.18, G:0.15, T:0.50
Consensus pattern (140 bp):
CATTTTTGACTCGTGGTTTAATCTAGCTCATTTTCATTTTCTGACTCACAGCTTAATCACGATCA
TTTTCATTTTCTGACCCATGGTTTAATCATAGCCATTTTCATTTTTTGACTCGTGCTCTAATCAT
GGTCTGTTTC
Found at i:5337393 original size:212 final size:213
Alignment explanation
Indices: 5337001--5337441 Score: 482
Period size: 212 Copynumber: 2.1 Consensus size: 213
5336991 ATCTCGATCA
* * * * *
5337001 TTTTCATTTTCTGACCCGTGGTTTAATCCTGATCGTTTTTCTTTTTTTGATTGGTGCTTTAATCC
1 TTTTCATTTTTTGACTCGTGGTTTAATCCTGATCATTTTTCTTTTTTTCATTGGGGCTTTAATCC
** * *
5337066 TGGTTGTTTCCATTTCTTGACTTACGGTTTAATCTGGCTCATTTTCATTTTCTGACTCACGGCTT
66 TAATGGTTTCCATTTCTTAACTTACGGTTTAATCTGGCTCATTTTCATTTTCTGACTCACGGCTT
** * * * * *
5337131 AATCAGGATTATTTTCATTTTTTGACTCATGGTTTAATCATAGCCATTTTCATTTTTT-GACTCG
131 AATCACCATCATTTTCATCTTTCGACTCACGGTTTAATCAGAGCCATTTTCATTTTTTCGACTCG
* *
5337195 TGGTCTAATCAT-GGTCTT
196 TGATCTAATC-TCGGTCGT
*
5337213 TTTTCATTTTTTGACTCGTGGTTTAATCCCT-ATCATTTTTCTTTTTTTCA-TGGGGAGTTTAAT
1 TTTTCATTTTTTGACTCGTGGTTTAAT-CCTGATCATTTTTCTTTTTTTCATTGGGG-CTTTAAT
* ** ** *
5337276 CCTAATGGTTTTCATTT-TCTAACTTGTGGTTTAATCTAGG-TTGTTTTCATTTTTTGACTCACG
64 CCTAATGGTTTCCATTTCT-TAACTTACGGTTTAATCT-GGCTCATTTTCATTTTCTGACTCACG
* * * *
5337339 GTTTAATCCCCATCATTTTCATCTTTCGACTCACGGTTTAATC-GCGATCATTTTCATTTTTTCG
127 GCTTAATCACCATCATTTTCATCTTTCGACTCACGGTTTAATCAGAG-CCATTTTCATTTTTTCG
* *
5337403 ACTTGTGATTTAATCTCGGTCGT
191 ACTCGTGATCTAATCTCGGTCGT
* *
5337426 TCTTCAATTTTTGACT
1 TTTTCATTTTTTGACT
5337442 GACTTGCGAT
Statistics
Matches: 189, Mismatches: 33, Indels: 13
0.80 0.14 0.06
Matches are distributed among these distances:
211 6 0.03
212 146 0.77
213 37 0.20
ACGTcount: A:0.17, C:0.18, G:0.15, T:0.50
Consensus pattern (213 bp):
TTTTCATTTTTTGACTCGTGGTTTAATCCTGATCATTTTTCTTTTTTTCATTGGGGCTTTAATCC
TAATGGTTTCCATTTCTTAACTTACGGTTTAATCTGGCTCATTTTCATTTTCTGACTCACGGCTT
AATCACCATCATTTTCATCTTTCGACTCACGGTTTAATCAGAGCCATTTTCATTTTTTCGACTCG
TGATCTAATCTCGGTCGT
Found at i:5337447 original size:40 final size:40
Alignment explanation
Indices: 5337402--5337481 Score: 142
Period size: 40 Copynumber: 2.0 Consensus size: 40
5337392 TCATTTTTTC
*
5337402 GACTTGTGATTTAATCTCGGTCGTTCTTCAATTTTTGACT
1 GACTTGCGATTTAATCTCGGTCGTTCTTCAATTTTTGACT
*
5337442 GACTTGCGATTTAATCTCGGTCGTTCTTCATTTTTTGACT
1 GACTTGCGATTTAATCTCGGTCGTTCTTCAATTTTTGACT
5337482 CATGTTTTAA
Statistics
Matches: 38, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
40 38 1.00
ACGTcount: A:0.16, C:0.19, G:0.17, T:0.47
Consensus pattern (40 bp):
GACTTGCGATTTAATCTCGGTCGTTCTTCAATTTTTGACT
Found at i:5337951 original size:37 final size:37
Alignment explanation
Indices: 5337847--5337959 Score: 97
Period size: 37 Copynumber: 3.1 Consensus size: 37
5337837 TAGTTTTCGA
* * *
5337847 TTTT-TGACATGTGATTTAATATCGATC-ATTTTCAT
1 TTTTCTGACTTGTGATTTAATATCGATCGTTTTTTAT
* * ** * * *
5337882 TTCTCCGACTCATGATTTAATAACGGTTGTTTTTTAT
1 TTTTCTGACTTGTGATTTAATATCGATCGTTTTTTAT
*
5337919 TTTTCTGACTTGTGATTTAATCTCGATCGTTTTCTT-T
1 TTTTCTGACTTGTGATTTAATATCGATCGTTTT-TTAT
5337956 TTTT
1 TTTT
5337960 GAACACTGTT
Statistics
Matches: 57, Mismatches: 18, Indels: 4
0.72 0.23 0.05
Matches are distributed among these distances:
35 3 0.05
36 16 0.28
37 36 0.63
38 2 0.04
ACGTcount: A:0.19, C:0.14, G:0.12, T:0.54
Consensus pattern (37 bp):
TTTTCTGACTTGTGATTTAATATCGATCGTTTTTTAT
Found at i:5338421 original size:71 final size:70
Alignment explanation
Indices: 5338292--5338450 Score: 187
Period size: 71 Copynumber: 2.2 Consensus size: 70
5338282 GTTTTGGGGG
* * *
5338292 TTTCGATTTTTTGACTCATGATTTATTCTTAGTAGTTTTCGATTTTTGACATGTGATTTAATATC
1 TTTC-ATTTTTTGACTCATGATTTATACATAGTAGTTTTCGATTTTTGACATGCGATTTAATATC
5338357 GATCAT
65 GATCAT
* * * *
5338363 TTTCATTTCTTTGACTCATGATTTA-ACAATGGTTGTTTTC-ATTTTCTGACTTGCGATTTAATC
1 TTTCATTT-TTTGACTCATGATTTATAC-ATAGTAGTTTTCGATTTT-TGACATGCGATTTAATA
*
5338426 TCGATCGT
63 TCGATCAT
*
5338434 TTTCGTTTTTTGACTCA
1 TTTCATTTTTTGACTCA
5338451 CGGTTTAGTC
Statistics
Matches: 76, Mismatches: 9, Indels: 7
0.83 0.10 0.08
Matches are distributed among these distances:
70 19 0.25
71 57 0.75
ACGTcount: A:0.20, C:0.14, G:0.14, T:0.52
Consensus pattern (70 bp):
TTTCATTTTTTGACTCATGATTTATACATAGTAGTTTTCGATTTTTGACATGCGATTTAATATCG
ATCAT
Found at i:5338758 original size:41 final size:41
Alignment explanation
Indices: 5338713--5338800 Score: 113
Period size: 41 Copynumber: 2.1 Consensus size: 41
5338703 AATCCCTCGT
* * * * *
5338713 ATTTTCATTTTATGACGCGTGGTTTATTCTTAGTCATTTTC
1 ATTTTCATTTTATGACGCATAGTTTAATCTCAATCATTTTC
* *
5338754 ATTTTCATTTTCTGACTCATAGTTTAATCTCAATCATTTTC
1 ATTTTCATTTTATGACGCATAGTTTAATCTCAATCATTTTC
5338795 ATTTTC
1 ATTTTC
5338801 TGACCCATGG
Statistics
Matches: 40, Mismatches: 7, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
41 40 1.00
ACGTcount: A:0.20, C:0.17, G:0.09, T:0.53
Consensus pattern (41 bp):
ATTTTCATTTTATGACGCATAGTTTAATCTCAATCATTTTC
Found at i:5338951 original size:71 final size:68
Alignment explanation
Indices: 5338755--5339340 Score: 246
Period size: 71 Copynumber: 8.4 Consensus size: 68
5338745 GTCATTTTCA
* * ** * * *
5338755 TTTTCATTTTCTGACTCATAGTTTAATCTCAATCATTTT-CATTTTCTGACCCATGGTTTAATCC
1 TTTTCATTTTTTGACTCATGGTTTAATCTGGAT-TTTTTCCATTTTTTGACTCATGGTTTAAT-C
5338819 TGATCG
64 TG-TCG
* ** * * **
5338825 TTTT--TTTTTTTACTGTTGGTTTAATCCTGG-TTGTTTCCATTTTTTAACTTGTGGTTTAATCT
1 TTTTCATTTTTTGACTCATGGTTTAAT-CTGGATTTTTTCCATTTTTTGACTCATGGTTTAATCT
5338887 GGCTCG
65 -G-TCG
* *
5338893 TTTTCATTTTTTGACTCATGGCTTAATCAGGATTATTTTCCATTTTTTGACTCATGGTTTAATCA
1 TTTTCATTTTTTGACTCATGGTTTAATCTGGATT-TTTTCCATTTTTTGACTCATGGTTTAATC-
*
5338958 TAGTCA
64 T-GTCG
* * * * *
5338964 TTTTCATTTTTTGACTCGTGGTCTCATCGTGG-TCTTTTTTCATTTTTTGACTCGTGGTTTAATC
1 TTTTCATTTTTTGACTCATGGTTTAATC-TGGAT-TTTTTCCATTTTTTGACTCATGGTTTAATC
5339028 ---C-
64 TGTCG
* * ** * *** * * **
5339029 TTATCATTTTTTTTA-TGGGTAGTTTAATCCCAATTGTTTCCATTTTCTGACTGGTGGTTTAATC
1 TTTTCA-TTTTTTGACT-CATGGTTTAATCTGGATTTTTTCCATTTTTTGACTCATGGTTTAATC
5339093 TTGGTCG
64 -T-GTCG
* ** *
5339100 TTTTCATTTTCTGACTTGTGGTTTAATCTAGG-TTGTTTT-CATTTTTTGACTCACGGTTTAATC
1 TTTTCATTTTTTGACTCATGGTTTAATCT-GGATT-TTTTCCATTTTTTGACTCATGGTTTAAT-
* *
5339163 CCCGTCC
63 -CTGTCG
* ** ** * * *** ** *
5339170 TTTTCATCTTCCGACTCACAGTTTAATCACGGTAATTTTTGTTTTTTTTGACTTGTGATTTAATC
1 TTTTCATTTTTTGACTCATGGTTTAATC-TGG-ATTTTTTCCATTTTTTGACTCATGGTTTAATC
5339235 TCGATCG
64 T-G-TCG
** * * * *
5339242 TTCTTCATTTTTTGACTTGTGTTTTAATCAT-GATCATTTT-CATTTCTTGACTCATGATTTAAA
1 TT-TTCATTTTTTGACTCATGGTTTAATC-TGGAT-TTTTTCCATTTTTTGACTCATGGTTT-AA
* *
5339305 CCCGATCG
62 TCTG-TCG
** *
5339313 AATTCATTTTATGACTCATGGTTTAATC
1 TTTTCATTTTTTGACTCATGGTTTAATC
5339341 CCAATCATTT
Statistics
Matches: 382, Mismatches: 101, Indels: 66
0.70 0.18 0.12
Matches are distributed among these distances:
65 32 0.08
66 17 0.04
67 5 0.01
68 43 0.11
69 5 0.01
70 111 0.29
71 114 0.30
72 36 0.09
73 19 0.05
ACGTcount: A:0.18, C:0.17, G:0.14, T:0.51
Consensus pattern (68 bp):
TTTTCATTTTTTGACTCATGGTTTAATCTGGATTTTTTCCATTTTTTGACTCATGGTTTAATCTG
TCG
Found at i:5339219 original size:207 final size:207
Alignment explanation
Indices: 5338855--5339234 Score: 453
Period size: 207 Copynumber: 1.8 Consensus size: 207
5338845 TTAATCCTGG
* * *
5338855 TTGTTTCCATTTTTTAACTTGTGGTTTAATCTGGCTCGTTTTCATTTTTTGACTCATGGCTTAAT
1 TTGTTTCCATTTTCTAACTGGTGGTTTAATCTGGCTCGTTTTCATTTTCTGACTCATGGCTTAAT
* * * ** ***
5338920 CAGGATTATTTTCCATTTTTTGACTCATGGTTTAATCATAGTCATTTTCATTTTTTGACTCGTGG
66 CAGGATTATTTTCCATTTTTTGACTCACGGTTTAATCACAGTCATTTTCATCTTCCGACTCACAG
* ** * *
5338985 TCTCATCGTGGTCTTTTTTCATTTTTTGACTCGTGGTTTAATCCTTATCATTTTTTTTATGGGTA
131 TCTAATCACGGTATTTTTTCATTTTTTGACTCGTGATTTAATCCTTATCATTTTTTTTATGGGTA
5339050 GTTTAATCCCAA
196 GTTTAATCCCAA
* ** *
5339062 TTGTTTCCATTTTCTGACTGGTGGTTTAATCTTGG-TCGTTTTCATTTTCTGACTTGTGGTTTAA
1 TTGTTTCCATTTTCTAACTGGTGGTTTAATC-TGGCTCGTTTTCATTTTCTGACTCATGGCTTAA
* * * *
5339126 TCTAGG-TTGTTTT-CATTTTTTGACTCACGGTTTAATCCCCGTCCTTTTCATCTTCCGACTCAC
65 TC-AGGATTATTTTCCATTTTTTGACTCACGGTTTAATCACAGTCATTTTCATCTTCCGACTCAC
* * *
5339189 AGTTTAATCACGGTAATTTTTGT-TTTTTTTGACTTGTGATTTAATC
129 AGTCTAATCACGGT-ATTTTT-TCATTTTTTGACTCGTGATTTAATC
5339235 TCGATCGTTC
Statistics
Matches: 142, Mismatches: 27, Indels: 8
0.80 0.15 0.05
Matches are distributed among these distances:
206 49 0.35
207 86 0.61
208 7 0.05
ACGTcount: A:0.17, C:0.17, G:0.16, T:0.51
Consensus pattern (207 bp):
TTGTTTCCATTTTCTAACTGGTGGTTTAATCTGGCTCGTTTTCATTTTCTGACTCATGGCTTAAT
CAGGATTATTTTCCATTTTTTGACTCACGGTTTAATCACAGTCATTTTCATCTTCCGACTCACAG
TCTAATCACGGTATTTTTTCATTTTTTGACTCGTGATTTAATCCTTATCATTTTTTTTATGGGTA
GTTTAATCCCAA
Found at i:5340043 original size:373 final size:375
Alignment explanation
Indices: 5339274--5340043 Score: 810
Period size: 373 Copynumber: 2.1 Consensus size: 375
5339264 TTTAATCATG
* * * * * * *
5339274 ATCATTTTCATTTCTTGACTCATGATTTAAACCCGATCGAATTCATTTTATGACTCATGGTTTAA
1 ATCATATTCATTTCTTGACTCATGATTCAAA-CTGGTTGCATTCATTTTATAACTCATGGTTTAA
** * *
5339339 TCCCAATCATTTTTCTTTTTCATTTTTTTATTGTTCTCATTTTCTAACTCGTAGCTTAATTCCAG
65 TCCCAATCATTTTTCTTTTTCATTTTTAGATCGTTCTCATTTTCTAACTCGTAGCTTAATTCCAA
* * * *
5339404 TCATTTTCATTTTCTGACTCACGGTTTAATCCTATTCATTTTTCTTTTTCTGACTGGTGGTTTAA
130 TCATTTTCATTTTCTGACTCAAGGTTTAATCCTAGTCATTTTCCTTTTTCTGACTAGTGGTTTAA
* * *
5339469 TCCCGGTCATTTCTTTTTTCTGACTCATGGTTTAATCTTAGTCGTTTCCATTTTCTAGCTCGTGC
195 TCCCGGTCATTTCTATTTTCTGACTCATGGTTTAATCTTAGTCGTTTCCATTTTCTAGCTAGTGA
* * * * * *
5339534 TTTAATCTAGGTCATTTTTTTTTTCTGACTCAATGTTTAATCCCACTTGTTTTCGTTTTCTGACT
260 TTTAATCCAGATCATTTTTTATTTCTGACTCAATGTTTAATCCCACTCGTTGTCATTTTCTGACT
* ** * * *
5339599 CATGGTTTAATCCAGGTTGTTTTTCATTTTTTAACTCGTACTTTAATCCCA
325 CATGATTTAATCCAGACTGATTTTCATTTCTTAACTCGTACTTTAAACCCA
* * * * * **
5339650 GTCATTTTTATTTCTTGACTCATGATTCAAACTGGTTGCATTCATTTTCTAACTCGTGGTTTGGT
1 ATCATATTCATTTCTTGACTCATGATTCAAACTGGTTGCATTCATTTTATAACTCATGGTTTAAT
* * * * * * *
5339715 CCCGATCA-TTTT-TTTTTCATTTTTAGATCGTTTTCATTTTTTGACTCGTGGTTTAATAT-TAA
66 CCCAATCATTTTTCTTTTTCATTTTTAGATCGTTCTCATTTTCTAACTCGTAGCTTAAT-TCCAA
* * * *
5339777 TCATTTTCATTTTCTGACTCAATGTTTAAT-CTCGGTCGTTTTCCTTTTTCTGGCTAGTGGTTTA
130 TCATTTTCATTTTCTGACTCAAGGTTTAATCCT-AGTCATTTTCCTTTTTCTGACTAGTGGTTTA
* * * *
5339841 ATCTCGGTCATTT-TCATTTTCTGACTCGTGGTTTAATCCTTA-TCGTTTTCATTTT-TTGACTA
194 ATCCCGGTCATTTCT-ATTTTCTGACTCATGGTTTAAT-CTTAGTCGTTTCCATTTTCTAG-CTA
* * * *
5339903 GTGATTTAATCCCGATCATTTTTTATTTCTGACTC-GTGATTTAA-CCTTAGTCGTTGTCATTTT
256 GTGATTTAATCCAGATCATTTTTTATTTCTGACTCAATG-TTTAATCC-CACTCGTTGTCATTTT
*
5339966 CTTGACTCATGATTTAATCCCGACT-ATTTTCATTTCTTAACTC--ACGATTTAAACCCA
319 C-TGACTCATGATTTAATCCAGACTGATTTTCATTTCTTAACTCGTAC--TTTAAACCCA
**
5340023 ATTGTATTCAGTTT-TTGACTC
1 ATCATATTCA-TTTCTTGACTC
5340044 GTGGTTTAAT
Statistics
Matches: 323, Mismatches: 60, Indels: 25
0.79 0.15 0.06
Matches are distributed among these distances:
371 2 0.01
372 9 0.03
373 221 0.68
374 31 0.10
375 32 0.10
376 28 0.09
ACGTcount: A:0.19, C:0.19, G:0.12, T:0.49
Consensus pattern (375 bp):
ATCATATTCATTTCTTGACTCATGATTCAAACTGGTTGCATTCATTTTATAACTCATGGTTTAAT
CCCAATCATTTTTCTTTTTCATTTTTAGATCGTTCTCATTTTCTAACTCGTAGCTTAATTCCAAT
CATTTTCATTTTCTGACTCAAGGTTTAATCCTAGTCATTTTCCTTTTTCTGACTAGTGGTTTAAT
CCCGGTCATTTCTATTTTCTGACTCATGGTTTAATCTTAGTCGTTTCCATTTTCTAGCTAGTGAT
TTAATCCAGATCATTTTTTATTTCTGACTCAATGTTTAATCCCACTCGTTGTCATTTTCTGACTC
ATGATTTAATCCAGACTGATTTTCATTTCTTAACTCGTACTTTAAACCCA
Found at i:5340044 original size:176 final size:175
Alignment explanation
Indices: 5339853--5340175 Score: 428
Period size: 176 Copynumber: 1.8 Consensus size: 175
5339843 CTCGGTCATT
*
5339853 TTCATTTTCTGACTCGTGGTTTAATCCTT-ATCGTTTTCATTTTTTGACT-AGTGATTTAATCCC
1 TTCATTTTCTGACTCGTGGTTTAAT-CTTGATCGTTTTCATTTTTTGACTCA-CGATTTAATCCC
* * * * *
5339916 GATCATTTTTTA-TTTCTGACTCGT-GATTTAA-CCTTAGTCGTTGTCATTTTCTTGACTCA-TG
64 GATC-TTTTTTATTTTCTAACTCGTAG-TTTAATAC-AAGTCATTGTCATTTT-TTGACTCACAG
5339977 ATTTAATCCCGA-CTATTTTCATTTCTTAACTCACGATTTAAACCCAATTGTA
125 -TTTAATCCCGATC-ATTTTCATTTCTTAACTCACGATTTAAACCCAATTGTA
* *
5340029 TTCAGTTTT-TGACTCGTGGTTTAATCTTGGTCGTTTTCATTTTTTGACTCACGATTTAATCTCG
1 TTCA-TTTTCTGACTCGTGGTTTAATCTTGATCGTTTTCATTTTTTGACTCACGATTTAATCCCG
*
5340093 ATCTTTTTTATTTTCTAACTCGTAGTTTAATACAAGTCATTTTCATTTTTTGACTCACAGTTTAA
65 ATCTTTTTTATTTTCTAACTCGTAGTTTAATACAAGTCATTGTCATTTTTTGACTCACAGTTTAA
5340158 TCCCGATCATTTTCATTT
130 TCCCGATCATTTTCATTT
5340176 TTGAACTTGT
Statistics
Matches: 130, Mismatches: 9, Indels: 17
0.83 0.06 0.11
Matches are distributed among these distances:
175 39 0.30
176 84 0.65
177 7 0.05
ACGTcount: A:0.21, C:0.19, G:0.11, T:0.49
Consensus pattern (175 bp):
TTCATTTTCTGACTCGTGGTTTAATCTTGATCGTTTTCATTTTTTGACTCACGATTTAATCCCGA
TCTTTTTTATTTTCTAACTCGTAGTTTAATACAAGTCATTGTCATTTTTTGACTCACAGTTTAAT
CCCGATCATTTTCATTTCTTAACTCACGATTTAAACCCAATTGTA
Done.