Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168177.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27874

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
851--899
4
12.2
4
86
0
62
46
4
0
48
1.20
851--899
10
4.9
10
87
0
62
46
4
0
48
1.20
1663--1710
21
2.1
24
88
11
75
52
6
2
39
1.39
1595--1820
111
2.0
113
96
1
420
42
6
4
46
1.51
3654--3764
22
5.0
22
78
10
93
51
3
8
36
1.49
3789--3836
22
2.2
22
88
7
71
66
8
2
22
1.29
3887--4003
22
5.3
22
79
2
119
52
5
7
35
1.52
3885--4003
44
2.7
44
82
0
166
52
5
8
34
1.54
4317--4415
46
2.2
45
80
14
105
52
4
8
35
1.50
4540--4598
22
2.7
22
82
10
75
47
8
10
33
1.68
4838--5149
44
7.0
44
70
14
172
46
7
8
37
1.62
4837--4967
66
2.0
66
81
3
156
48
6
9
35
1.60
4610--4967
22
16.3
22
69
9
140
47
6
10
34
1.65
4981--5109
22
5.9
22
77
6
86
46
10
4
38
1.58
4986--5062
11
7.0
11
67
11
50
50
7
2
38
1.45
5401--5483
22
3.8
22
76
7
71
46
7
9
36
1.64
5604--5777
66
2.6
66
81
1
179
46
9
6
37
1.62
5614--5777
22
7.5
22
82
1
132
46
9
6
37
1.62
5941--6017
22
3.5
22
71
5
66
45
9
9
36
1.68
6006--6048
22
2.0
22
85
0
59
46
2
4
46
1.36
7593--7629
19
1.9
19
94
0
65
72
0
2
24
0.97
7814--7856
19
2.3
19
87
0
59
48
0
2
48
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11091--11166
40
1.9
40
86
0
107
32
28
11
26
1.92
23898--23924
2
13.5
2
100
0
54
51
0
0
48
1.00
24239--24281
19
2.3
19
95
0
77
37
23
13
25
1.92
25296--25402
44
2.5
42
77
11
108
43
2
0
52
1.22
25552--25576
6
4.2
6
100
0
50
84
0
0
16
0.63

Tables:   1

The End!