Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167861.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71190

Tables:   1   

This is table  1  of  1  ( 55 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1344--1379
1
36.0
1
88
0
54
0
0
5
94
0.31
4665--4736
19
3.5
20
75
18
76
48
1
0
50
1.09
6686--6722
18
2.1
18
94
0
65
35
10
13
40
1.80
7598--7632
18
1.9
18
88
0
52
14
2
14
68
1.32
8623--8676
25
2.2
25
83
6
65
48
5
0
46
1.25
11007--11039
16
2.1
16
88
5
50
48
6
0
45
1.27
11464--11496
15
2.3
15
89
5
50
72
3
3
21
1.11
13947--13996
13
4.0
12
79
7
55
66
0
0
34
0.92
15446--15520
23
3.3
23
70
20
75
46
1
0
52
1.09
15436--15528
46
2.0
46
97
0
177
45
2
0
52
1.12
15455--15528
23
3.2
23
72
14
80
43
1
0
55
1.08
16486--16530
20
2.2
20
84
7
56
31
2
2
64
1.18
16763--16806
21
2.0
21
86
4
61
56
15
0
27
1.40
19608--19770
72
2.3
72
91
2
256
22
26
15
35
1.94
25216--25250
17
2.0
18
88
5
54
48
0
0
51
1.00
28291--28620
161
2.0
162
94
0
581
31
8
10
49
1.67
30320--30358
21
1.9
21
89
5
62
17
7
5
69
1.32
35371--35424
3
18.0
3
100
0
108
66
0
0
33
0.92
35430--35463
3
11.3
3
100
0
68
32
0
0
67
0.91
36237--36262
13
2.0
13
100
0
52
30
7
7
53
1.57
38614--38674
17
3.8
17
79
14
76
42
24
0
32
1.55
38614--38719
31
3.5
31
81
3
117
45
27
0
26
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38614--38723
15
7.2
15
75
13
82
43
28
0
27
1.61
40422--40456
18
1.9
18
88
0
52
14
2
14
68
1.32
41513--41566
25
2.0
27
83
16
69
44
5
0
50
1.25
41711--41752
19
2.3
19
88
12
61
52
2
2
42
1.27
41724--41756
15
2.1
16
88
5
50
54
0
6
39
1.25
43381--43419
19
2.1
19
85
9
53
33
0
0
66
0.92
44378--44410
15
2.3
15
89
5
50
72
3
3
21
1.11
48415--48489
23
3.3
23
70
20
75
46
1
0
52
1.09
48405--48497
46
2.0
46
97
0
177
45
2
0
52
1.12
48424--48497
23
3.2
23
72
14
80
43
1
0
55
1.08
48713--48762
22
2.3
22
83
10
59
42
6
0
52
1.26
48720--48763
22
2.0
22
86
8
63
38
6
0
54
1.27
49455--49499
20
2.2
20
84
7
56
31
2
2
64
1.18
49732--49777
22
2.1
22
88
4
67
56
15
0
28
1.39
52160--52215
9
6.4
9
89
6
71
83
16
0
0
0.64
52162--52211
4
11.8
4
79
12
55
82
18
0
0
0.68
52160--52221
13
4.7
13
84
6
72
82
16
0
1
0.75
52160--52221
17
3.6
17
83
14
83
82
16
0
1
0.75
52270--52311
12
3.6
11
87
9
57
21
59
14
4
1.53
52518--52558
21
2.0
21
90
0
64
80
12
7
0
0.90
52539--52570
14
2.4
13
90
10
55
78
15
6
0
0.95
53146--53186
21
2.0
21
85
0
55
19
41
26
12
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53656--53724
16
4.2
16
79
5
57
49
33
2
14
1.58
53656--53724
33
2.1
33
83
5
86
49
33
2
14
1.58
53667--53724
16
3.6
16
79
9
64
48
32
3
15
1.62
53857--54139
142
2.0
142
98
0
550
38
12
15
32
1.86
60556--60718
72
2.3
72
92
2
265
22
26
14
36
1.93
63028--63073
6
7.7
6
95
0
74
28
32
19
19
1.96
64250--64279
2
15.0
2
92
0
51
53
0
0
46
1.00
67443--67480
20
1.9
20
100
0
76
71
5
5
18
1.25
68832--68886
23
2.3
24
84
6
76
47
7
0
45
1.30
69098--69130
12
2.8
12
90
9
50
66
3
0
30
1.06
69188--69754
191
3.0
193
91
1
892
36
12
14
36
1.84

Tables:   1

The End!