Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168205.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_440, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26811

Tables:   1   

This is table  1  of  1  ( 56 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1366--1414
24
2.0
24
88
7
73
20
16
8
55
1.66
2378--2442
31
2.1
31
88
5
96
50
6
0
43
1.27
3002--3038
19
2.1
19
85
10
51
45
0
8
45
1.32
3480--3511
16
2.1
16
94
5
57
65
0
0
34
0.93
3650--3674
13
1.9
13
100
0
50
40
8
0
52
1.31
4667--4753
25
3.6
22
81
18
63
50
1
1
47
1.16
4689--4803
46
2.6
44
77
17
121
47
1
1
48
1.22
4692--4752
26
2.4
26
89
8
90
45
0
1
52
1.10
4725--4765
14
2.8
16
78
17
52
46
0
4
48
1.23
4925--5006
26
3.1
26
77
10
76
46
7
0
46
1.30
5454--5486
12
2.7
13
86
13
52
54
0
0
45
0.99
5745--5777
17
1.9
17
88
11
50
60
0
0
39
0.97
6816--6860
19
2.2
20
92
7
74
48
0
0
51
1.00
6816--6858
22
2.0
21
95
4
77
51
0
0
48
1.00
7107--7148
13
3.0
14
80
19
52
45
0
0
54
0.99
7098--7166
27
2.5
28
78
17
67
46
1
1
50
1.19
7642--8260
181
3.5
179
74
5
398
41
7
9
42
1.66
11357--11669
171
1.8
171
82
5
400
41
7
9
41
1.64
11518--11950
180
2.4
180
73
8
414
40
8
9
42
1.66
11826--12105
150
1.9
149
80
3
330
38
8
11
41
1.71
12272--12645
176
2.1
178
82
6
438
43
9
8
38
1.68
12494--12806
161
1.9
161
82
2
387
38
9
9
41
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13019--14475
181
8.1
180
74
8
1058
40
8
9
41
1.67
13017--14510
534
2.8
535
76
9
1275
40
8
9
41
1.67
15595--15890
149
2.0
149
80
4
328
39
9
9
42
1.69
15737--16626
181
5.0
181
75
7
712
39
7
10
41
1.69
15459--16072
330
1.9
326
80
4
725
39
8
9
42
1.69
16745--17225
180
2.7
180
80
7
544
38
8
9
43
1.67
17835--17874
19
2.0
20
85
4
55
47
0
5
47
1.24
17834--17892
20
2.8
21
80
15
59
50
0
3
45
1.18
18117--18296
8
22.0
8
67
26
60
48
1
0
48
1.15
18122--18296
17
10.2
17
68
25
86
49
1
0
48
1.15
18151--18190
20
2.0
21
85
14
57
50
2
0
47
1.14
18211--18296
35
2.3
35
79
15
86
50
0
1
48
1.08
18866--18924
30
2.0
30
86
6
84
44
0
3
52
1.17
19424--19453
14
2.2
13
94
5
51
36
0
3
60
1.14
19420--19488
17
4.2
17
73
12
56
37
0
5
56
1.23
19978--20024
20
2.3
20
96
0
85
46
0
6
46
1.28
19981--20030
20
2.8
18
82
14
52
50
0
6
44
1.26
20032--20084
18
3.0
18
78
8
56
43
3
1
50
1.30
20377--21188
182
4.5
181
77
7
686
42
9
8
39
1.67
21311--22341
179
5.9
174
72
12
499
41
9
8
40
1.69
21833--22366
179
3.0
179
79
7
550
40
9
8
41
1.68
21514--22182
347
1.9
346
80
4
783
42
10
7
39
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21861--22340
181
2.7
178
78
6
511
40
9
8
41
1.66
24001--24030
14
2.1
14
93
0
51
46
0
0
53
1.00
24454--24901
181
2.5
177
82
9
498
42
9
8
40
1.67
25332--25380
13
4.1
13
76
15
52
48
0
0
51
1.00
25348--25424
25
3.1
25
75
12
79
51
0
0
48
1.00
25338--25424
11
8.5
11
70
25
59
51
0
0
48
1.00
25333--25421
39
2.4
36
82
15
112
50
0
0
49
1.00
25351--25426
18
4.0
19
73
19
68
50
0
0
50
1.00
25510--25555
21
2.1
22
84
4
58
58
2
2
36
1.22
26314--26368
21
2.6
22
83
13
64
52
0
0
47
1.00
26662--26741
27
3.0
26
78
8
81
50
1
0
48
1.08
26704--26792
25
3.6
23
70
22
65
44
1
2
51
1.21

Tables:   1

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