Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019168207.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26740

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--112
17
5.0
17
85
12
126
35
6
11
46
1.66
54--139
22
4.1
22
82
14
128
38
5
9
46
1.60
37--134
39
2.5
39
98
0
187
36
6
10
46
1.63
4709--4742
17
2.0
17
100
0
68
52
0
11
35
1.38
4729--4859
20
6.2
20
75
20
90
58
0
11
29
1.39
4769--4846
21
3.2
25
78
17
92
60
0
10
29
1.30
4783--4825
11
4.0
11
93
6
79
62
0
9
27
1.25
4762--4857
32
2.9
31
75
20
97
59
0
10
30
1.31
5031--5100
13
5.5
13
83
16
85
64
0
0
35
0.94
5031--5093
21
3.2
21
86
13
98
65
0
0
34
0.93
8518--8568
22
2.4
22
93
3
86
50
3
7
37
1.50
9523--9564
15
2.6
17
81
11
61
14
4
2
78
1.01
9603--9654
25
2.1
25
96
0
95
21
13
15
50
1.78
9608--9661
25
2.2
25
86
0
72
24
12
20
42
1.87
9741--9790
15
3.1
15
84
15
73
32
0
8
60
1.26
9750--9787
18
2.1
18
100
0
76
26
0
10
63
1.27
9789--9822
17
2.0
17
94
0
59
29
0
8
61
1.26
9824--9873
19
2.6
19
93
0
82
28
6
4
62
1.37
9857--9911
19
2.8
19
86
2
65
27
5
0
67
1.12
9819--9893
38
2.0
38
84
5
98
25
8
2
64
1.34
9924--10112
17
10.4
18
69
17
79
44
1
2
51
1.22
9993--10099
8
12.6
8
73
14
72
49
0
0
49
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9954--10112
77
2.1
76
84
5
205
45
1
3
49
1.25
9989--10112
35
3.3
35
86
12
176
50
0
1
48
1.10
10124--10251
4
32.2
4
70
24
85
71
3
0
24
1.08
10137--10214
13
6.5
13
79
19
82
71
5
0
23
1.05
10130--10247
45
2.7
44
90
6
186
71
4
0
23
1.09
12336--12675
30
11.3
30
100
0
680
16
23
23
36
1.94
12689--12923
18
13.1
18
96
3
397
22
14
12
50
1.76
13241--13278
18
2.1
18
100
0
76
28
21
15
34
1.94
15083--15251
78
2.2
78
97
0
320
35
8
15
40
1.77
15234--15266
15
2.2
15
100
0
66
48
0
6
45
1.27
15327--15359
15
2.2
15
100
0
66
48
0
6
45
1.27
15156--15432
93
3.0
93
100
0
554
36
7
14
41
1.74
17812--17879
21
3.4
20
82
13
86
61
0
0
38
0.96
17820--17877
6
10.0
6
85
10
77
65
0
0
34
0.93
17812--17877
27
2.5
26
87
9
89
63
0
0
36
0.95
19815--19860
23
2.0
23
100
0
92
26
21
4
47
1.69
25340--25383
21
2.1
21
100
0
88
22
9
13
54
1.67
25340--25391
21
2.5
21
90
6
70
26
7
11
53
1.63
25561--25639
20
4.0
20
83
3
115
65
0
5
29
1.13
25871--25934
24
2.6
25
90
5
103
57
0
0
42
0.98
25870--25908
18
2.2
18
100
0
78
56
0
0
43
0.99
25916--25943
14
2.0
14
100
0
56
57
0
0
42
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25874--25948
18
4.1
18
74
19
73
60
0
0
40
0.97

Tables:   1

The End!